# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- GTP_EFTU_D4 PF14578.6 gi|156936796|ref|YP_001434592.1| - 3.5e-39 132.6 1.9 3.5e-39 132.6 1.9 2.9 3 0 0 3 3 3 1 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 gi|156936796|ref|YP_001434592.1| - 4.7e-34 117.6 0.0 1.5e-33 116.0 0.0 1.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 gi|156936796|ref|YP_001434592.1| - 1.2e-24 86.5 0.9 1.2e-24 86.5 0.9 1.8 2 0 0 2 2 2 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|156936796|ref|YP_001434592.1| - 2.2e-10 40.8 8.3 3.8e-10 40.0 0.6 3.2 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|156936796|ref|YP_001434592.1| - 7.3e-08 32.5 0.1 8.8e-07 29.0 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 gi|156936796|ref|YP_001434592.1| - 0.0055 16.9 0.0 0.027 14.7 0.0 2.2 3 0 0 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 gi|156936796|ref|YP_001434592.1| - 0.023 14.5 0.0 0.098 12.4 0.0 2.1 1 1 1 2 2 2 0 Conserved hypothetical ATP binding protein Dynamin_N PF00350.23 gi|156936796|ref|YP_001434592.1| - 0.036 14.1 0.1 0.42 10.7 0.0 2.6 2 0 0 2 2 2 0 Dynamin family NTPase_1 PF03266.15 gi|156936796|ref|YP_001434592.1| - 0.26 11.2 4.1 3.3 7.6 0.4 3.1 2 1 1 3 3 3 0 NTPase DUF2312 PF10073.9 gi|156936796|ref|YP_001434592.1| - 6.4 6.5 8.2 26 4.5 1.4 3.2 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) FAD-oxidase_C PF02913.19 gi|156936797|ref|YP_001434593.1| - 4.9e-41 141.0 0.0 6.9e-41 140.5 0.0 1.2 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|156936797|ref|YP_001434593.1| - 9.3e-40 135.6 0.1 1.5e-39 134.9 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain Peptidase_C2 PF00648.21 gi|156936797|ref|YP_001434593.1| - 0.0047 16.0 0.3 0.0076 15.3 0.3 1.2 1 0 0 1 1 1 1 Calpain family cysteine protease tRNA_int_endo PF01974.17 gi|156936799|ref|YP_001434595.1| - 2.2e-08 34.1 0.0 3.5e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain SCAN PF02023.17 gi|156936799|ref|YP_001434595.1| - 0.0037 17.0 0.0 0.7 9.7 0.0 2.2 2 0 0 2 2 2 2 SCAN domain tRNA_int_endo_N PF02778.14 gi|156936799|ref|YP_001434595.1| - 0.013 15.1 0.1 0.03 14.0 0.1 1.6 1 0 0 1 1 1 0 tRNA intron endonuclease, N-terminal domain Cupin_2 PF07883.11 gi|156936799|ref|YP_001434595.1| - 0.089 12.5 0.0 0.18 11.5 0.0 1.5 1 0 0 1 1 1 0 Cupin domain Radical_SAM PF04055.21 gi|156936800|ref|YP_001434596.1| - 1.6e-21 77.4 0.1 2.8e-20 73.4 0.0 2.0 1 1 1 2 2 2 2 Radical SAM superfamily Fer4_12 PF13353.6 gi|156936800|ref|YP_001434596.1| - 1.7e-06 28.4 0.0 2.5e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156936800|ref|YP_001434596.1| - 0.0004 20.5 0.0 0.0016 18.6 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain ComA PF02679.15 gi|156936800|ref|YP_001434596.1| - 0.21 11.0 0.0 0.31 10.5 0.0 1.3 1 1 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) Topoisom_bac PF01131.20 gi|156936802|ref|YP_001434598.1| - 2.5e-115 385.8 0.0 3.1e-115 385.5 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|156936802|ref|YP_001434598.1| - 2.3e-12 47.1 0.0 9.2e-12 45.1 0.0 2.0 2 0 0 2 2 2 1 Toprim domain WD40_like PF17005.5 gi|156936803|ref|YP_001434599.1| - 3.8e-06 26.5 0.1 0.0019 17.6 0.0 2.2 1 1 0 2 2 2 2 WD40-like domain Cytochrom_D1 PF02239.16 gi|156936803|ref|YP_001434599.1| - 0.032 12.8 1.4 4.3 5.7 0.0 3.0 3 0 0 3 3 3 0 Cytochrome D1 heme domain PQQ_3 PF13570.6 gi|156936803|ref|YP_001434599.1| - 0.039 14.4 11.1 12 6.6 1.9 5.5 4 1 0 4 4 4 0 PQQ-like domain PQQ PF01011.21 gi|156936803|ref|YP_001434599.1| - 0.042 13.8 2.3 16 5.6 0.0 4.5 5 0 0 5 5 5 0 PQQ enzyme repeat WD40 PF00400.32 gi|156936803|ref|YP_001434599.1| - 0.44 11.5 7.9 2.6 9.1 1.6 3.9 4 1 0 4 4 4 0 WD domain, G-beta repeat Beta-Casp PF10996.8 gi|156936804|ref|YP_001434600.1| - 3.3e-24 85.3 0.0 1.8e-23 82.9 0.0 2.3 2 0 0 2 2 2 1 Beta-Casp domain KH_7 PF17214.3 gi|156936804|ref|YP_001434600.1| - 4.6e-22 77.7 4.9 6.2e-21 74.1 2.1 3.2 3 0 0 3 3 3 1 KH domain Lactamase_B_6 PF16661.5 gi|156936804|ref|YP_001434600.1| - 1.3e-14 54.1 0.0 7.9e-14 51.5 0.0 2.2 3 0 0 3 3 3 1 Metallo-beta-lactamase superfamily domain RMMBL PF07521.12 gi|156936804|ref|YP_001434600.1| - 4.2e-14 52.2 0.0 1.2e-13 50.7 0.0 1.9 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|156936804|ref|YP_001434600.1| - 5.1e-09 36.4 0.7 2.4e-08 34.2 0.7 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|156936804|ref|YP_001434600.1| - 1.3e-07 31.3 0.0 2.7e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|156936804|ref|YP_001434600.1| - 8.5e-05 22.5 0.0 0.00018 21.5 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|156936804|ref|YP_001434600.1| - 0.0059 16.4 2.8 0.0073 16.1 0.4 2.4 2 0 0 2 2 2 1 KH domain DRMBL PF07522.14 gi|156936804|ref|YP_001434600.1| - 0.099 12.8 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 DNA repair metallo-beta-lactamase VGCC_beta4Aa_N PF12052.8 gi|156936805|ref|YP_001434601.1| - 1.3 9.2 3.9 8.4 6.6 0.1 3.0 3 0 0 3 3 3 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal DUF2175 PF09943.9 gi|156936805|ref|YP_001434601.1| - 5.3 7.4 5.8 4.4 7.7 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) MoCF_biosynth PF00994.24 gi|156936806|ref|YP_001434602.1| - 1.4e-29 102.7 0.0 1.6e-29 102.5 0.0 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain Archease PF01951.16 gi|156936807|ref|YP_001434603.1| - 2.1e-45 154.4 0.7 2.3e-45 154.2 0.7 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) GrpE PF01025.19 gi|156936807|ref|YP_001434603.1| - 0.013 15.2 0.4 0.016 14.9 0.4 1.2 1 0 0 1 1 1 0 GrpE GatB_N PF02934.15 gi|156936808|ref|YP_001434604.1| - 5.9e-98 327.6 0.0 8.1e-98 327.1 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|156936808|ref|YP_001434604.1| - 1e-37 129.3 0.0 1.8e-37 128.5 0.0 1.4 1 0 0 1 1 1 1 GatB domain HTH_5 PF01022.20 gi|156936809|ref|YP_001434605.1| - 4.4e-10 39.3 0.0 7.7e-10 38.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|156936809|ref|YP_001434605.1| - 8.7e-10 38.6 0.1 1.1e-09 38.3 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|156936809|ref|YP_001434605.1| - 9e-10 38.0 0.0 1.9e-09 37.0 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|156936809|ref|YP_001434605.1| - 1.6e-06 27.9 0.0 3.2e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|156936809|ref|YP_001434605.1| - 2.6e-06 27.1 0.0 6.3e-06 25.9 0.0 1.7 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|156936809|ref|YP_001434605.1| - 1.4e-05 25.1 0.0 4e-05 23.6 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|156936809|ref|YP_001434605.1| - 2.4e-05 24.2 0.0 4.5e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|156936809|ref|YP_001434605.1| - 5.5e-05 23.0 0.1 0.00011 22.1 0.1 1.6 1 1 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|156936809|ref|YP_001434605.1| - 6.6e-05 23.0 0.1 0.00015 21.9 0.1 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_Crp_2 PF13545.6 gi|156936809|ref|YP_001434605.1| - 7.5e-05 22.6 0.0 0.00014 21.7 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_40 PF14493.6 gi|156936809|ref|YP_001434605.1| - 0.0001 22.7 0.0 0.00014 22.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_10 PF04967.12 gi|156936809|ref|YP_001434605.1| - 0.00014 21.5 0.0 0.00027 20.7 0.0 1.4 1 0 0 1 1 1 1 HTH DNA binding domain TrmB PF01978.19 gi|156936809|ref|YP_001434605.1| - 0.00035 20.4 0.0 0.00057 19.7 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|156936809|ref|YP_001434605.1| - 0.001 18.9 0.1 0.0013 18.5 0.1 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_23 PF13384.6 gi|156936809|ref|YP_001434605.1| - 0.0013 18.5 0.0 0.0023 17.7 0.0 1.5 1 1 0 1 1 1 1 Homeodomain-like domain HTH_27 PF13463.6 gi|156936809|ref|YP_001434605.1| - 0.0018 18.7 0.0 0.0039 17.6 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_1 PF00126.27 gi|156936809|ref|YP_001434605.1| - 0.0046 16.9 0.0 0.0085 16.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family SgrR_N PF12793.7 gi|156936809|ref|YP_001434605.1| - 0.0096 16.1 0.1 0.012 15.8 0.1 1.2 1 0 0 1 1 1 1 Sugar transport-related sRNA regulator N-term HTH_45 PF14947.6 gi|156936809|ref|YP_001434605.1| - 0.01 15.8 0.0 0.018 15.0 0.0 1.4 1 1 0 1 1 1 0 Winged helix-turn-helix Rrf2 PF02082.20 gi|156936809|ref|YP_001434605.1| - 0.017 15.5 0.0 0.031 14.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator HTH_29 PF13551.6 gi|156936809|ref|YP_001434605.1| - 0.018 15.0 0.0 0.032 14.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_36 PF13730.6 gi|156936809|ref|YP_001434605.1| - 0.018 15.0 0.1 0.032 14.2 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain KORA PF16509.5 gi|156936809|ref|YP_001434605.1| - 0.02 15.1 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor HTH_Mga PF08280.11 gi|156936809|ref|YP_001434605.1| - 0.023 14.7 0.0 0.036 14.1 0.0 1.3 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain Crp PF00325.20 gi|156936809|ref|YP_001434605.1| - 0.026 14.2 0.0 0.049 13.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, crp family TFIIE_alpha PF02002.17 gi|156936809|ref|YP_001434605.1| - 0.032 14.1 0.1 0.057 13.3 0.0 1.5 2 0 0 2 2 1 0 TFIIE alpha subunit DUF4530 PF15039.6 gi|156936809|ref|YP_001434605.1| - 0.04 14.1 1.3 0.057 13.6 1.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4530) HTH_12 PF08461.10 gi|156936809|ref|YP_001434605.1| - 0.041 13.8 0.0 0.079 12.9 0.0 1.5 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain DDRGK PF09756.9 gi|156936809|ref|YP_001434605.1| - 0.049 13.2 1.3 0.052 13.1 0.0 1.6 2 0 0 2 2 2 0 DDRGK domain HTH_38 PF13936.6 gi|156936809|ref|YP_001434605.1| - 0.074 12.8 0.0 0.21 11.4 0.0 1.7 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_54 PF18607.1 gi|156936809|ref|YP_001434605.1| - 0.08 13.0 0.0 0.18 11.9 0.0 1.7 1 1 0 1 1 1 0 ParA helix turn helix domain Ntox28 PF15605.6 gi|156936809|ref|YP_001434605.1| - 0.084 13.1 0.3 0.92 9.8 0.1 2.1 1 1 1 2 2 2 0 Bacterial toxin 28 FUR PF01475.19 gi|156936809|ref|YP_001434605.1| - 0.088 13.0 0.1 0.18 11.9 0.1 1.6 1 1 0 1 1 1 0 Ferric uptake regulator family HTH_AsnC-type PF13404.6 gi|156936809|ref|YP_001434605.1| - 0.1 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|156936809|ref|YP_001434605.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_28 PF13518.6 gi|156936809|ref|YP_001434605.1| - 0.17 12.0 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Terminase_5 PF06056.12 gi|156936809|ref|YP_001434605.1| - 0.18 11.7 0.0 0.34 10.8 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) CarboxypepD_reg PF13620.6 gi|156936812|ref|YP_001434608.1| - 8.7e-31 106.0 9.0 5.2e-07 29.8 0.1 5.8 5 0 0 5 5 5 5 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|156936812|ref|YP_001434608.1| - 9.6e-14 51.2 9.2 0.0013 18.7 0.2 5.5 5 0 0 5 5 5 3 CarboxypepD_reg-like domain PEGA PF08308.11 gi|156936812|ref|YP_001434608.1| - 5.9e-13 48.5 8.7 8.1e-06 25.6 0.1 6.2 5 0 0 5 5 5 3 PEGA domain bMG3 PF11974.8 gi|156936812|ref|YP_001434608.1| - 4.5e-07 29.8 0.1 0.00085 19.3 0.0 3.7 3 0 0 3 3 3 1 Bacterial alpha-2-macroglobulin MG3 domain Big_1 PF02369.16 gi|156936812|ref|YP_001434608.1| - 0.00031 20.7 12.5 0.2 11.7 0.0 4.7 5 0 0 5 5 5 2 Bacterial Ig-like domain (group 1) fn3_3 PF14686.6 gi|156936812|ref|YP_001434608.1| - 0.002 17.9 0.2 0.013 15.3 0.1 2.4 2 0 0 2 2 2 1 Polysaccharide lyase family 4, domain II DUF4493 PF14900.6 gi|156936812|ref|YP_001434608.1| - 0.0048 16.8 9.9 0.28 11.0 1.1 4.0 4 0 0 4 4 4 1 Domain of unknown function (DUF4493) DUF1533 PF07550.11 gi|156936812|ref|YP_001434608.1| - 0.028 14.3 0.1 2.3 8.2 0.0 4.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1533) UPF0560 PF10577.9 gi|156936812|ref|YP_001434608.1| - 0.03 12.9 0.4 0.33 9.4 0.2 2.0 2 0 0 2 2 2 0 Uncharacterised protein family UPF0560 TniB PF05621.11 gi|156936812|ref|YP_001434608.1| - 0.19 11.1 0.0 0.4 10.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein DUF3869 PF12985.7 gi|156936812|ref|YP_001434608.1| - 0.25 11.7 3.5 1.3 9.4 0.1 3.4 2 1 0 2 2 2 0 Domain of unknown function (DUF3869) DHQ_synthase PF01761.20 gi|156936813|ref|YP_001434609.1| - 4.9e-81 271.7 0.0 6.7e-81 271.3 0.0 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH PF00465.19 gi|156936813|ref|YP_001434609.1| - 0.00011 21.1 0.0 0.00025 20.0 0.0 1.6 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|156936813|ref|YP_001434609.1| - 0.00051 19.8 0.0 0.0094 15.7 0.0 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Dsl1_N PF11988.8 gi|156936813|ref|YP_001434609.1| - 0.074 12.0 0.5 0.1 11.6 0.0 1.4 2 0 0 2 2 2 0 Retrograde transport protein Dsl1 N terminal ASCH PF04266.14 gi|156936814|ref|YP_001434610.1| - 5.5e-12 46.2 0.1 7.6e-12 45.8 0.1 1.2 1 0 0 1 1 1 1 ASCH domain DUF3850 PF12961.7 gi|156936814|ref|YP_001434610.1| - 0.036 14.1 0.2 0.062 13.4 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3850) S4_2 PF13275.6 gi|156936814|ref|YP_001434610.1| - 0.1 12.4 0.3 0.2 11.5 0.3 1.4 1 0 0 1 1 1 0 S4 domain UPF0047 PF01894.17 gi|156936815|ref|YP_001434611.1| - 2.4e-37 127.6 0.0 2.8e-37 127.4 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 QRPTase_C PF01729.19 gi|156936816|ref|YP_001434612.1| - 1.4e-25 90.0 0.0 2e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_C PF17956.1 gi|156936816|ref|YP_001434612.1| - 2.7e-05 24.6 0.0 6.6e-05 23.3 0.0 1.6 1 0 0 1 1 1 1 Nicotinate phosphoribosyltransferase C-terminal domain QRPTase_N PF02749.16 gi|156936816|ref|YP_001434612.1| - 5.3e-05 23.2 0.0 0.00011 22.1 0.0 1.6 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain NAPRTase_N PF17767.1 gi|156936816|ref|YP_001434612.1| - 6.4e-05 23.3 0.0 0.26 11.7 0.0 2.4 1 1 1 2 2 2 2 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Ribosomal_S2 PF00318.20 gi|156936816|ref|YP_001434612.1| - 0.087 12.0 0.0 0.2 10.9 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S2 PUA PF01472.20 gi|156936817|ref|YP_001434613.1| - 2.8e-24 84.9 0.1 5.3e-24 84.0 0.1 1.5 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|156936817|ref|YP_001434613.1| - 5.7e-06 26.5 0.0 0.00013 22.1 0.0 2.3 1 1 1 2 2 2 1 UPF0113 PUA domain DUF1947 PF09183.10 gi|156936817|ref|YP_001434613.1| - 8.8e-06 25.9 0.2 2.5e-05 24.5 0.2 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) Pre-PUA PF17832.1 gi|156936817|ref|YP_001434613.1| - 0.028 15.1 0.3 0.053 14.2 0.3 1.5 1 1 0 1 1 1 0 Pre-PUA-like domain SH3_6 PF12913.7 gi|156936819|ref|YP_001434615.1| - 0.11 12.0 0.1 0.19 11.3 0.1 1.3 1 0 0 1 1 1 0 SH3 domain (SH3b1 type) AFOR_C PF01314.18 gi|156936820|ref|YP_001434616.1| - 9.4e-92 307.9 0.0 1.2e-91 307.6 0.0 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|156936820|ref|YP_001434616.1| - 6e-67 225.4 0.3 1.1e-66 224.6 0.3 1.4 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain ATR13 PF16829.5 gi|156936821|ref|YP_001434617.1| - 0.064 13.6 2.1 1.6 9.2 0.2 2.3 1 1 0 2 2 2 0 Avirulence protein ATR13, RxLR effector CRISPR_Cas9_WED PF18061.1 gi|156936821|ref|YP_001434617.1| - 0.1 12.7 2.4 0.18 11.9 0.7 1.9 1 1 1 2 2 2 0 CRISPR-Cas9 WED domain GvpL_GvpF PF06386.11 gi|156936821|ref|YP_001434617.1| - 2.1 8.2 8.1 0.52 10.2 5.1 1.5 1 1 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF GatB_Yqey PF02637.18 gi|156936821|ref|YP_001434617.1| - 5.6 6.8 10.5 0.34 10.8 3.3 2.2 1 1 0 2 2 2 0 GatB domain PRA-PH PF01503.17 gi|156936824|ref|YP_001434620.1| - 4.6e-18 65.4 0.0 5.1e-18 65.3 0.0 1.0 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase E1_dh PF00676.20 gi|156936824|ref|YP_001434620.1| - 0.066 12.2 0.0 0.08 11.9 0.0 1.0 1 0 0 1 1 1 0 Dehydrogenase E1 component MazG PF03819.17 gi|156936824|ref|YP_001434620.1| - 0.068 13.4 0.1 0.11 12.7 0.1 1.3 1 0 0 1 1 1 0 MazG nucleotide pyrophosphohydrolase domain GATase PF00117.28 gi|156936825|ref|YP_001434621.1| - 2.8e-15 56.6 0.0 3.1e-15 56.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I SNO PF01174.19 gi|156936825|ref|YP_001434621.1| - 6.4e-06 26.1 0.0 0.0025 17.7 0.0 2.0 2 0 0 2 2 2 2 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|156936825|ref|YP_001434621.1| - 0.0016 18.0 0.1 0.0027 17.3 0.1 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain UPF0180 PF03698.13 gi|156936825|ref|YP_001434621.1| - 0.015 15.5 0.1 0.04 14.1 0.0 1.7 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0180) GATase_5 PF13507.6 gi|156936825|ref|YP_001434621.1| - 0.085 11.9 0.2 0.58 9.2 0.3 2.2 2 1 0 2 2 2 0 CobB/CobQ-like glutamine amidotransferase domain ASCH PF04266.14 gi|156936828|ref|YP_001434624.1| - 0.00047 20.7 0.0 0.00087 19.8 0.0 1.4 1 1 0 1 1 1 1 ASCH domain AAA_22 PF13401.6 gi|156936829|ref|YP_001434625.1| - 0.021 15.1 0.0 0.11 12.7 0.0 2.2 3 1 0 3 3 3 0 AAA domain NRDD PF13597.6 gi|156936831|ref|YP_001434627.1| - 1.1e-130 437.1 0.0 1.3e-130 436.9 0.0 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase LexA_DNA_bind PF01726.16 gi|156936832|ref|YP_001434628.1| - 0.021 14.6 0.1 1.2 9.0 0.1 2.4 2 1 0 2 2 2 0 LexA DNA binding domain UBN_AB PF14075.6 gi|156936832|ref|YP_001434628.1| - 0.05 13.3 1.2 0.72 9.5 0.0 2.5 1 1 2 3 3 3 0 Ubinuclein conserved middle domain Gpi1 PF05024.15 gi|156936832|ref|YP_001434628.1| - 0.076 13.1 0.0 0.082 13.0 0.0 1.1 1 0 0 1 1 1 0 N-acetylglucosaminyl transferase component (Gpi1) ABC_tran PF00005.27 gi|156936833|ref|YP_001434629.1| - 2.7e-39 134.8 0.0 1.1e-18 68.0 0.0 2.4 2 0 0 2 2 2 2 ABC transporter RLI PF04068.15 gi|156936833|ref|YP_001434629.1| - 5.5e-13 48.5 3.4 5.5e-13 48.5 3.4 2.0 2 0 0 2 2 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SMC_N PF02463.19 gi|156936833|ref|YP_001434629.1| - 2.7e-11 43.3 7.1 0.0023 17.4 0.7 4.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|156936833|ref|YP_001434629.1| - 6.7e-11 42.5 10.8 0.0046 16.8 1.1 4.2 2 2 0 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|156936833|ref|YP_001434629.1| - 4.2e-07 30.0 0.0 0.011 15.5 0.0 2.9 3 0 0 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 gi|156936833|ref|YP_001434629.1| - 6.6e-07 29.0 0.4 0.039 13.7 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|156936833|ref|YP_001434629.1| - 1.6e-06 28.8 0.3 0.032 14.7 0.0 2.3 2 0 0 2 2 2 2 AAA domain Fer4 PF00037.27 gi|156936833|ref|YP_001434629.1| - 6.7e-06 25.7 3.1 6.7e-06 25.7 3.1 3.0 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|156936833|ref|YP_001434629.1| - 2.3e-05 24.2 12.3 0.0037 17.3 2.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156936833|ref|YP_001434629.1| - 0.00019 21.5 10.2 0.002 18.2 1.3 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_22 PF13401.6 gi|156936833|ref|YP_001434629.1| - 0.0003 21.1 0.5 0.72 10.1 0.0 3.0 2 1 0 2 2 2 2 AAA domain Rad17 PF03215.15 gi|156936833|ref|YP_001434629.1| - 0.00046 20.2 0.0 0.29 11.0 0.0 2.3 2 0 0 2 2 2 1 Rad17 P-loop domain Fer4_9 PF13187.6 gi|156936833|ref|YP_001434629.1| - 0.00081 19.5 16.8 0.0024 18.0 1.7 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156936833|ref|YP_001434629.1| - 0.00089 19.8 4.9 0.0022 18.6 5.0 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|156936833|ref|YP_001434629.1| - 0.0011 19.4 0.0 0.16 12.4 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain SbcCD_C PF13558.6 gi|156936833|ref|YP_001434629.1| - 0.0012 19.0 0.1 0.47 10.7 0.0 2.8 2 2 0 2 2 2 1 Putative exonuclease SbcCD, C subunit RsgA_GTPase PF03193.16 gi|156936833|ref|YP_001434629.1| - 0.0018 18.2 0.1 1.1 9.2 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase Fer4_16 PF13484.6 gi|156936833|ref|YP_001434629.1| - 0.0031 18.4 6.2 0.0031 18.4 0.4 2.3 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|156936833|ref|YP_001434629.1| - 0.0061 16.7 8.6 0.0099 16.0 8.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_24 PF13479.6 gi|156936833|ref|YP_001434629.1| - 0.0063 16.3 0.9 0.52 10.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|156936833|ref|YP_001434629.1| - 0.0065 16.5 1.8 4.4 7.4 0.2 3.1 2 1 0 2 2 2 1 50S ribosome-binding GTPase Fer4_2 PF12797.7 gi|156936833|ref|YP_001434629.1| - 0.0068 16.4 1.3 0.0068 16.4 1.3 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_30 PF13604.6 gi|156936833|ref|YP_001434629.1| - 0.012 15.3 0.3 1.8 8.3 0.4 2.6 2 1 0 2 2 2 0 AAA domain Fer4_17 PF13534.6 gi|156936833|ref|YP_001434629.1| - 0.018 15.6 2.9 0.052 14.1 0.3 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain AAA_27 PF13514.6 gi|156936833|ref|YP_001434629.1| - 0.034 13.7 0.0 1.3 8.5 0.0 2.4 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 gi|156936833|ref|YP_001434629.1| - 0.036 14.4 0.0 2.4 8.6 0.0 2.5 2 0 0 2 2 2 0 RNA helicase AAA PF00004.29 gi|156936833|ref|YP_001434629.1| - 0.049 14.0 0.0 1.3 9.5 0.0 2.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|156936833|ref|YP_001434629.1| - 0.058 13.3 0.8 0.87 9.5 0.0 2.6 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 gi|156936833|ref|YP_001434629.1| - 0.061 13.2 0.2 2 8.3 0.0 2.4 2 0 0 2 2 2 0 NACHT domain MeaB PF03308.16 gi|156936833|ref|YP_001434629.1| - 0.065 12.2 1.0 8.3 5.3 0.0 2.2 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_18 PF13238.6 gi|156936833|ref|YP_001434629.1| - 0.11 13.0 0.0 22 5.6 0.0 2.9 2 0 0 2 2 2 0 AAA domain MukB PF04310.12 gi|156936833|ref|YP_001434629.1| - 0.18 11.6 0.1 3.8 7.3 0.0 2.2 2 0 0 2 2 2 0 MukB N-terminal DUF87 PF01935.17 gi|156936833|ref|YP_001434629.1| - 0.2 11.7 1.8 14 5.7 0.0 2.4 2 0 0 2 2 2 0 Helicase HerA, central domain Cren7 PF11520.8 gi|156936834|ref|YP_001434630.1| - 5.2e-16 58.3 0.4 5.7e-16 58.2 0.4 1.1 1 0 0 1 1 1 1 Chromatin protein Cren7 PhnA_Zn_Ribbon PF08274.12 gi|156936834|ref|YP_001434630.1| - 0.015 15.2 1.3 0.018 15.0 0.4 1.6 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_2 PF13240.6 gi|156936834|ref|YP_001434630.1| - 0.02 14.6 0.9 0.02 14.6 0.9 1.8 2 0 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|156936834|ref|YP_001434630.1| - 0.033 14.3 1.3 0.52 10.5 0.4 2.1 2 0 0 2 2 2 0 Zinc ribbon domain DUF1936 PF09151.10 gi|156936834|ref|YP_001434630.1| - 0.042 13.8 3.6 0.56 10.2 3.6 2.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1936) zf-ribbon_3 PF13248.6 gi|156936834|ref|YP_001434630.1| - 0.058 12.8 1.8 0.15 11.5 0.3 2.1 2 0 0 2 2 2 0 zinc-ribbon domain DUF4777 PF16007.5 gi|156936834|ref|YP_001434630.1| - 0.18 12.1 0.0 0.23 11.8 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4777) DNA_ligase_ZBD PF03119.16 gi|156936834|ref|YP_001434630.1| - 0.2 11.7 2.5 0.92 9.6 2.5 1.9 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain DUF1610 PF07754.11 gi|156936834|ref|YP_001434630.1| - 0.88 9.6 7.3 8.8 6.4 1.3 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF1610) AdoHcyase PF05221.17 gi|156936835|ref|YP_001434631.1| - 3.4e-74 249.7 0.0 2.7e-41 141.7 0.1 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|156936835|ref|YP_001434631.1| - 4.3e-60 202.5 1.1 6.2e-60 201.9 0.4 1.6 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|156936835|ref|YP_001434631.1| - 9e-10 38.2 0.4 2.4e-09 36.8 0.4 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|156936835|ref|YP_001434631.1| - 9.1e-08 31.8 0.3 2e-07 30.8 0.3 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|156936835|ref|YP_001434631.1| - 0.0028 17.9 0.3 0.017 15.4 0.1 2.3 2 0 0 2 2 2 1 TrkA-N domain THF_DHG_CYH_C PF02882.19 gi|156936835|ref|YP_001434631.1| - 0.0036 16.6 1.1 0.022 14.1 1.1 2.0 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Glyco_trans_4_2 PF13477.6 gi|156936835|ref|YP_001434631.1| - 0.081 13.0 0.0 0.58 10.2 0.0 2.3 3 0 0 3 3 3 0 Glycosyl transferase 4-like 3HCDH_N PF02737.18 gi|156936835|ref|YP_001434631.1| - 0.11 12.3 1.3 0.16 11.8 0.5 1.7 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AlaDh_PNT_C PF01262.21 gi|156936835|ref|YP_001434631.1| - 0.32 10.3 3.0 1.5 8.0 3.0 2.0 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain PfkB PF00294.24 gi|156936836|ref|YP_001434632.1| - 5.4e-38 131.0 0.3 3.7e-37 128.3 0.3 2.1 1 1 0 1 1 1 1 pfkB family carbohydrate kinase DUF4265 PF14085.6 gi|156936836|ref|YP_001434632.1| - 0.13 12.3 0.1 0.38 10.7 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4265) DHODB_Fe-S_bind PF10418.9 gi|156936837|ref|YP_001434633.1| - 0.00027 20.7 3.1 0.00051 19.8 3.1 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NAD_binding_1 PF00175.21 gi|156936837|ref|YP_001434633.1| - 0.0046 17.6 0.0 1.6 9.4 0.0 2.3 2 0 0 2 2 2 2 Oxidoreductase NAD-binding domain PyrI PF01948.18 gi|156936838|ref|YP_001434634.1| - 2.1e-32 111.2 0.2 3e-32 110.7 0.2 1.2 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|156936838|ref|YP_001434634.1| - 1.4e-18 66.5 1.7 2.1e-18 65.9 1.7 1.3 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain PriA_CRR PF18319.1 gi|156936838|ref|YP_001434634.1| - 0.011 15.7 0.1 0.02 14.8 0.1 1.4 1 0 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain zinc_ribbon_12 PF11331.8 gi|156936838|ref|YP_001434634.1| - 0.069 13.0 0.6 0.13 12.1 0.6 1.5 1 1 0 1 1 1 0 Probable zinc-ribbon domain Saf_2TM PF18303.1 gi|156936838|ref|YP_001434634.1| - 0.11 12.1 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 SAVED-fused 2TM effector domain OTCace_N PF02729.21 gi|156936839|ref|YP_001434635.1| - 5.4e-39 133.6 0.0 1.5e-38 132.1 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|156936839|ref|YP_001434635.1| - 4.9e-23 81.9 0.0 7.4e-23 81.4 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Nup188 PF10487.9 gi|156936839|ref|YP_001434635.1| - 0.0026 15.8 0.5 0.024 12.6 0.1 1.9 2 0 0 2 2 2 2 Nucleoporin subcomplex protein binding to Pom34 PIN_9 PF18477.1 gi|156936841|ref|YP_001434637.1| - 4.3e-15 56.0 0.2 6e-15 55.6 0.2 1.2 1 0 0 1 1 1 1 PIN like domain Fcf1 PF04900.12 gi|156936841|ref|YP_001434637.1| - 0.036 14.4 0.0 0.06 13.8 0.0 1.3 1 0 0 1 1 1 0 Fcf1 Cytochrom_C_asm PF01578.20 gi|156936842|ref|YP_001434638.1| - 4.8e-25 88.6 8.5 4.8e-25 88.6 8.5 2.7 2 1 0 2 2 2 1 Cytochrome C assembly protein DUF4064 PF13273.6 gi|156936842|ref|YP_001434638.1| - 0.086 13.1 0.3 0.086 13.1 0.3 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF4064) BCHF PF07284.11 gi|156936842|ref|YP_001434638.1| - 0.1 12.6 13.2 0.021 14.9 7.9 2.3 2 1 0 2 2 2 0 2-vinyl bacteriochlorophyllide hydratase (BCHF) DUF4579 PF15158.6 gi|156936842|ref|YP_001434638.1| - 0.65 9.7 6.1 0.17 11.6 1.8 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4579) ORMDL PF04061.14 gi|156936842|ref|YP_001434638.1| - 3 7.6 8.9 0.19 11.5 3.0 2.0 2 1 0 2 2 2 0 ORMDL family DUF373 PF04123.13 gi|156936842|ref|YP_001434638.1| - 3 7.2 15.6 0.2 11.1 6.9 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF373) SirB PF04247.12 gi|156936842|ref|YP_001434638.1| - 5.8 7.0 20.6 0.032 14.3 5.4 2.7 3 0 0 3 3 3 0 Invasion gene expression up-regulator, SirB SHOCT PF09851.9 gi|156936844|ref|YP_001434640.1| - 0.09 12.5 0.1 0.18 11.6 0.1 1.5 1 0 0 1 1 1 0 Short C-terminal domain CitG PF01874.16 gi|156936845|ref|YP_001434641.1| - 4.7e-14 52.7 0.1 1e-11 45.0 0.1 2.9 1 1 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase Methyltrans_SAM PF10672.9 gi|156936846|ref|YP_001434642.1| - 3.1e-17 62.7 0.0 4e-17 62.3 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Cons_hypoth95 PF03602.15 gi|156936846|ref|YP_001434642.1| - 1.6e-10 41.0 0.0 2.5e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Met_10 PF02475.16 gi|156936846|ref|YP_001434642.1| - 2.7e-10 40.4 0.0 4.1e-10 39.7 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 gi|156936846|ref|YP_001434642.1| - 0.0019 17.6 0.0 0.0031 17.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 gi|156936846|ref|YP_001434642.1| - 0.0091 15.6 0.0 0.016 14.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain DNA_methylase PF00145.17 gi|156936846|ref|YP_001434642.1| - 0.13 11.6 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase CDP-OH_P_transf PF01066.21 gi|156936847|ref|YP_001434643.1| - 2.3e-12 47.5 0.8 2.3e-12 47.5 0.8 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase Helicase_C_2 PF13307.6 gi|156936848|ref|YP_001434644.1| - 1.8e-22 80.3 0.0 2.9e-22 79.6 0.0 1.3 1 0 0 1 1 1 1 Helicase C-terminal domain ResIII PF04851.15 gi|156936848|ref|YP_001434644.1| - 4.9e-12 46.2 0.0 3.3e-11 43.5 0.0 2.1 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD_2 PF06733.15 gi|156936848|ref|YP_001434644.1| - 3.9e-11 42.9 0.0 1.1e-10 41.4 0.0 1.6 2 0 0 2 2 2 1 DEAD_2 DEAD PF00270.29 gi|156936848|ref|YP_001434644.1| - 0.00013 21.8 0.0 0.11 12.2 0.0 2.9 3 0 0 3 3 3 2 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|156936848|ref|YP_001434644.1| - 0.003 17.8 0.0 3.2 8.0 0.0 2.5 2 0 0 2 2 2 2 AAA domain SNF2_N PF00176.23 gi|156936848|ref|YP_001434644.1| - 0.036 12.8 0.1 0.093 11.4 0.0 1.6 2 0 0 2 2 2 0 SNF2 family N-terminal domain PhoH PF02562.16 gi|156936848|ref|YP_001434644.1| - 0.047 13.1 0.0 2.1 7.8 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein Archease PF01951.16 gi|156936849|ref|YP_001434645.1| - 0.064 13.5 0.1 0.12 12.6 0.1 1.4 1 1 0 1 1 1 0 Archease protein family (MTH1598/TM1083) DUF432 PF04254.13 gi|156936850|ref|YP_001434646.1| - 1.7e-33 115.4 0.2 2.5e-33 114.8 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF432) MS_channel PF00924.18 gi|156936851|ref|YP_001434647.1| - 7.1e-46 156.4 2.0 9.8e-46 155.9 2.0 1.2 1 0 0 1 1 1 1 Mechanosensitive ion channel ExoD PF06055.12 gi|156936851|ref|YP_001434647.1| - 0.26 10.6 5.0 0.42 10.0 5.0 1.3 1 0 0 1 1 1 0 Exopolysaccharide synthesis, ExoD RimK PF08443.11 gi|156936852|ref|YP_001434648.1| - 5.1e-36 124.0 0.0 6.7e-36 123.6 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|156936852|ref|YP_001434648.1| - 1.7e-11 43.8 0.0 2.7e-11 43.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain CPSase_L_D2 PF02786.17 gi|156936852|ref|YP_001434648.1| - 1.8e-11 44.0 0.0 1.2e-10 41.3 0.0 2.2 2 1 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp_3 PF02655.14 gi|156936852|ref|YP_001434648.1| - 1.1e-09 38.5 0.0 1.6e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|156936852|ref|YP_001434648.1| - 1.2e-07 31.3 0.0 0.0017 17.6 0.0 2.5 3 0 0 3 3 3 2 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.22 gi|156936852|ref|YP_001434648.1| - 0.00022 20.9 0.0 0.00055 19.6 0.0 1.7 1 1 0 1 1 1 1 ATP-grasp domain Ins134_P3_kin PF05770.11 gi|156936852|ref|YP_001434648.1| - 0.00027 20.5 0.0 0.11 11.9 0.0 2.5 1 1 1 2 2 2 2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain R2K_3 PF14243.6 gi|156936852|ref|YP_001434648.1| - 0.015 15.3 0.4 0.021 14.8 0.4 1.4 1 1 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 ATPgrasp_YheCD PF14398.6 gi|156936852|ref|YP_001434648.1| - 0.016 14.5 0.0 0.077 12.2 0.0 1.9 2 0 0 2 2 2 0 YheC/D like ATP-grasp ATP-grasp_5 PF13549.6 gi|156936852|ref|YP_001434648.1| - 0.019 14.4 0.0 0.15 11.5 0.0 2.2 3 0 0 3 3 3 0 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|156936852|ref|YP_001434648.1| - 0.053 13.1 0.0 1.3 8.6 0.0 2.3 1 1 0 1 1 1 0 D-ala D-ala ligase C-terminus FKBP26_C PF18046.1 gi|156936853|ref|YP_001434649.1| - 8.1e-21 73.9 2.0 1.7e-20 72.8 2.0 1.6 1 0 0 1 1 1 1 FKBP26_C-terminal FKBP_C PF00254.28 gi|156936853|ref|YP_001434649.1| - 2.2e-16 60.0 0.1 4.9e-16 58.8 0.1 1.7 1 1 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase KH_5 PF13184.6 gi|156936854|ref|YP_001434650.1| - 0.012 15.6 0.1 0.03 14.4 0.1 1.8 1 1 0 1 1 1 0 NusA-like KH domain Spore_YhcN_YlaJ PF09580.10 gi|156936854|ref|YP_001434650.1| - 0.048 13.7 0.5 0.074 13.1 0.5 1.2 1 0 0 1 1 1 0 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DUF1729 PF08354.10 gi|156936854|ref|YP_001434650.1| - 0.15 10.9 0.0 0.17 10.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1729) Metallophos_2 PF12850.7 gi|156936855|ref|YP_001434651.1| - 5.3e-14 52.7 0.0 1e-13 51.8 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|156936855|ref|YP_001434651.1| - 1e-07 32.7 0.1 1.9e-07 31.8 0.1 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Toprim_4 PF13662.6 gi|156936856|ref|YP_001434652.1| - 1e-07 32.3 3.8 1.1e-07 32.2 0.2 3.0 3 1 1 4 4 4 1 Toprim domain SipA_VBS PF17985.1 gi|156936856|ref|YP_001434652.1| - 0.006 16.4 0.6 3.2 7.8 0.0 3.4 3 0 0 3 3 3 1 SipA vinculin binding site Toprim PF01751.22 gi|156936856|ref|YP_001434652.1| - 0.073 13.3 7.8 0.17 12.1 4.6 3.2 2 1 0 2 2 2 0 Toprim domain vWA-TerF-like PF10138.9 gi|156936856|ref|YP_001434652.1| - 0.11 12.6 2.9 0.12 12.4 0.7 2.0 2 0 0 2 2 2 0 vWA found in TerF C terminus DUF1460 PF07313.12 gi|156936856|ref|YP_001434652.1| - 0.45 9.9 1.9 0.77 9.1 0.2 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1460) Iron_permease PF04120.12 gi|156936856|ref|YP_001434652.1| - 0.79 9.5 7.5 0.17 11.7 3.6 1.9 2 0 0 2 2 2 0 Low affinity iron permease OTCace_N PF02729.21 gi|156936856|ref|YP_001434652.1| - 6.6 6.7 7.0 25 4.9 1.2 2.7 2 1 0 2 2 2 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DltD PF04914.12 gi|156936856|ref|YP_001434652.1| - 8.9 5.6 10.5 0.61 9.4 5.5 1.5 2 0 0 2 2 2 0 DltD protein UPF0242 PF06785.11 gi|156936856|ref|YP_001434652.1| - 9.3 6.3 15.4 16 5.5 11.8 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus DNA_pol_B PF00136.21 gi|156936857|ref|YP_001434653.1| - 1.1e-72 245.2 0.0 1.6e-72 244.7 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|156936857|ref|YP_001434653.1| - 8.7e-43 146.7 0.0 7.2e-41 140.4 0.0 2.3 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|156936857|ref|YP_001434653.1| - 2e-08 34.4 0.1 9.8e-08 32.2 0.0 2.1 2 0 0 2 2 2 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|156936857|ref|YP_001434653.1| - 0.002 17.8 0.2 0.0095 15.6 0.2 2.0 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB DNA_pol_B_2 PF03175.13 gi|156936857|ref|YP_001434653.1| - 0.019 13.9 0.2 0.046 12.6 0.0 1.6 2 0 0 2 2 2 0 DNA polymerase type B, organellar and viral SAP130_C PF16014.5 gi|156936858|ref|YP_001434654.1| - 5.8 5.9 6.6 6.9 5.6 6.6 1.1 1 0 0 1 1 1 0 Histone deacetylase complex subunit SAP130 C-terminus Strabismus PF06638.11 gi|156936858|ref|YP_001434654.1| - 6 5.4 6.1 7.4 5.1 6.1 1.0 1 0 0 1 1 1 0 Strabismus protein Ribosomal_S10 PF00338.22 gi|156936860|ref|YP_001434656.1| - 2.5e-26 91.8 0.2 2.8e-26 91.6 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|156936860|ref|YP_001434656.1| - 0.00039 21.2 0.0 0.00073 20.3 0.0 1.4 1 0 0 1 1 1 1 Primosomal protein N C-terminal domain DUF5605 PF18310.1 gi|156936860|ref|YP_001434656.1| - 0.038 13.9 0.3 0.13 12.1 0.2 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF5605) Pyr_redox_2 PF07992.14 gi|156936861|ref|YP_001434657.1| - 2.3e-40 138.7 1.9 2.8e-40 138.4 1.9 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|156936861|ref|YP_001434657.1| - 4.9e-11 43.0 4.2 5e-07 30.2 0.1 2.6 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|156936861|ref|YP_001434657.1| - 1.7e-07 30.8 3.1 0.0033 16.7 0.0 3.0 1 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|156936861|ref|YP_001434657.1| - 4.4e-06 26.2 0.9 0.05 12.9 0.1 2.6 3 0 0 3 3 3 2 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|156936861|ref|YP_001434657.1| - 2.4e-05 24.4 6.4 0.0042 17.1 0.1 3.9 4 0 0 4 4 4 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|156936861|ref|YP_001434657.1| - 0.00023 21.3 0.3 0.8 10.0 0.3 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|156936861|ref|YP_001434657.1| - 0.0014 17.8 9.5 0.23 10.5 0.2 3.9 2 2 2 4 4 4 2 Lycopene cyclase protein K_oxygenase PF13434.6 gi|156936861|ref|YP_001434657.1| - 0.002 17.3 0.3 0.0047 16.1 0.0 1.7 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 gi|156936861|ref|YP_001434657.1| - 0.003 16.9 5.1 0.041 13.2 0.1 2.6 3 0 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain DAO PF01266.24 gi|156936861|ref|YP_001434657.1| - 0.005 16.5 8.1 4.7 6.7 0.0 3.9 3 1 1 4 4 4 3 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|156936861|ref|YP_001434657.1| - 0.0058 15.9 1.2 14 4.8 0.0 3.1 3 0 0 3 3 3 0 FAD binding domain GIDA PF01134.22 gi|156936861|ref|YP_001434657.1| - 0.024 13.7 11.8 2.2 7.2 1.1 4.0 2 1 2 4 4 4 0 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|156936861|ref|YP_001434657.1| - 0.028 13.5 1.9 0.24 10.4 0.6 2.2 2 0 0 2 2 2 0 FAD binding domain 3HCDH_N PF02737.18 gi|156936861|ref|YP_001434657.1| - 0.1 12.5 1.1 9 6.1 0.1 2.4 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|156936861|ref|YP_001434657.1| - 0.11 11.2 7.4 1.9 7.1 0.0 3.4 3 1 1 4 4 4 0 HI0933-like protein Methyltr_RsmB-F PF01189.17 gi|156936862|ref|YP_001434658.1| - 1.2e-55 188.2 0.0 1.7e-55 187.8 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|156936862|ref|YP_001434658.1| - 1.3e-10 41.6 0.0 2.1e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_31 PF13847.6 gi|156936862|ref|YP_001434658.1| - 1.6e-05 24.7 0.0 2.8e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|156936862|ref|YP_001434658.1| - 0.0049 16.6 0.0 0.015 15.0 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|156936862|ref|YP_001434658.1| - 0.039 14.1 0.0 0.085 13.0 0.0 1.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase POR PF01558.18 gi|156936862|ref|YP_001434658.1| - 0.057 13.5 0.0 0.081 13.0 0.0 1.2 1 0 0 1 1 1 0 Pyruvate ferredoxin/flavodoxin oxidoreductase TauE PF01925.19 gi|156936864|ref|YP_001434660.1| - 4.7e-44 150.8 42.6 5.3e-44 150.6 42.6 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Nop PF01798.18 gi|156936865|ref|YP_001434661.1| - 1.1e-74 250.8 0.0 1.5e-74 250.3 0.0 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin DUF3173 PF11372.8 gi|156936865|ref|YP_001434661.1| - 0.019 14.8 0.0 0.049 13.5 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3173) DnaG_DnaB_bind PF08278.11 gi|156936865|ref|YP_001434661.1| - 0.14 12.7 6.3 8 7.1 0.3 3.6 2 1 0 3 3 3 0 DNA primase DnaG DnaB-binding RuvA_C PF07499.13 gi|156936865|ref|YP_001434661.1| - 0.45 11.0 3.6 0.28 11.7 0.9 2.2 2 0 0 2 2 2 0 RuvA, C-terminal domain Metallophos PF00149.28 gi|156936867|ref|YP_001434663.1| - 7.5e-20 72.3 0.0 1e-19 71.9 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF2079 PF09852.9 gi|156936869|ref|YP_001434665.1| - 1e-16 60.9 18.3 1.3e-16 60.5 18.3 1.2 1 0 0 1 1 1 1 Predicted membrane protein (DUF2079) EpsG PF14897.6 gi|156936869|ref|YP_001434665.1| - 0.00052 19.4 8.7 0.00052 19.4 8.7 1.8 2 1 1 3 3 3 2 EpsG family RHH_1 PF01402.21 gi|156936870|ref|YP_001434666.1| - 2.3e-07 30.5 0.1 6.2e-07 29.1 0.1 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 gi|156936870|ref|YP_001434666.1| - 5e-06 26.4 0.3 1.1e-05 25.3 0.0 1.7 2 1 0 2 2 2 1 Ribbon-helix-helix domain HicB_lk_antitox PF15919.5 gi|156936870|ref|YP_001434666.1| - 0.0099 16.0 0.0 0.024 14.8 0.0 1.7 1 1 1 2 2 2 1 HicB_like antitoxin of bacterial toxin-antitoxin system HTH_17 PF12728.7 gi|156936870|ref|YP_001434666.1| - 0.017 15.3 0.0 0.032 14.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|156936870|ref|YP_001434666.1| - 0.023 14.9 0.3 1.8 8.8 0.2 3.1 2 1 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain DUF3618 PF12277.8 gi|156936870|ref|YP_001434666.1| - 0.12 12.7 0.2 0.19 12.0 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3618) TrmB PF01978.19 gi|156936870|ref|YP_001434666.1| - 0.2 11.6 1.3 0.47 10.4 0.1 2.1 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB GatB_N PF02934.15 gi|156936872|ref|YP_001434668.1| - 3.1e-73 246.5 0.0 4.5e-73 246.0 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GAD PF02938.14 gi|156936872|ref|YP_001434668.1| - 7.9e-18 64.5 0.1 3.5e-17 62.4 0.0 2.2 2 0 0 2 2 2 1 GAD domain GatB_Yqey PF02637.18 gi|156936872|ref|YP_001434668.1| - 1.2e-16 60.9 11.5 3.2e-16 59.5 7.0 2.6 2 0 0 2 2 2 1 GatB domain YqeY PF09424.10 gi|156936872|ref|YP_001434668.1| - 1.7e-05 24.9 5.6 8e-05 22.7 5.6 2.3 1 1 0 1 1 1 1 Yqey-like protein Ctf8 PF09696.10 gi|156936872|ref|YP_001434668.1| - 0.00051 20.4 0.3 0.0011 19.3 0.3 1.5 1 0 0 1 1 1 1 Ctf8 TFIIA_gamma_N PF02268.16 gi|156936872|ref|YP_001434668.1| - 0.024 14.6 0.8 6 7.0 0.1 3.2 3 0 0 3 3 3 0 Transcription initiation factor IIA, gamma subunit, helical domain Sucrose_synth PF00862.19 gi|156936872|ref|YP_001434668.1| - 0.11 10.8 1.2 0.2 9.9 1.2 1.4 1 0 0 1 1 1 0 Sucrose synthase ASL_C PF08328.11 gi|156936872|ref|YP_001434668.1| - 0.38 10.9 6.2 0.72 10.0 1.1 3.2 2 1 1 3 3 3 0 Adenylosuccinate lyase C-terminal PEP-utilisers_N PF05524.13 gi|156936872|ref|YP_001434668.1| - 0.53 10.5 5.9 0.29 11.3 1.7 2.8 2 1 1 3 3 3 0 PEP-utilising enzyme, N-terminal SpoV PF08183.11 gi|156936872|ref|YP_001434668.1| - 1.6 8.8 4.0 0.43 10.6 0.3 2.0 2 0 0 2 2 2 0 Stage V sporulation protein family DNA_primase_lrg PF04104.14 gi|156936873|ref|YP_001434669.1| - 2.3e-28 99.3 0.0 3.3e-28 98.8 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit Lactamase_B_3 PF13483.6 gi|156936874|ref|YP_001434670.1| - 5.8e-28 97.8 0.3 8.3e-28 97.3 0.1 1.3 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|156936874|ref|YP_001434670.1| - 3.6e-14 52.7 0.1 5e-14 52.3 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156936874|ref|YP_001434670.1| - 0.059 13.4 4.6 0.58 10.1 4.6 2.1 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily Cupin_2 PF07883.11 gi|156936875|ref|YP_001434671.1| - 4.8e-20 71.1 0.6 7.5e-20 70.4 0.6 1.3 1 0 0 1 1 1 1 Cupin domain AraC_binding PF02311.19 gi|156936875|ref|YP_001434671.1| - 4e-09 36.5 0.2 5e-09 36.2 0.2 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|156936875|ref|YP_001434671.1| - 5.7e-05 22.7 0.1 0.0001 22.0 0.1 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF861) Cupin_1 PF00190.22 gi|156936875|ref|YP_001434671.1| - 6.1e-05 22.7 0.0 8.9e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Cupin MannoseP_isomer PF01050.18 gi|156936875|ref|YP_001434671.1| - 8.1e-05 22.6 0.0 8.7e-05 22.5 0.0 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_7 PF12973.7 gi|156936875|ref|YP_001434671.1| - 0.004 17.0 0.1 0.0054 16.6 0.1 1.2 1 0 0 1 1 1 1 ChrR Cupin-like domain CENP-C_C PF11699.8 gi|156936875|ref|YP_001434671.1| - 0.004 17.3 0.0 0.0056 16.9 0.0 1.2 1 0 0 1 1 1 1 Mif2/CENP-C like Ectoine_synth PF06339.12 gi|156936875|ref|YP_001434671.1| - 0.04 14.1 0.0 0.043 14.0 0.0 1.2 1 0 0 1 1 1 0 Ectoine synthase EutQ PF06249.12 gi|156936875|ref|YP_001434671.1| - 0.1 12.3 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ AAA PF00004.29 gi|156936876|ref|YP_001434672.1| - 8.6e-07 29.4 1.9 0.00026 21.4 0.0 4.2 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|156936876|ref|YP_001434672.1| - 0.0027 18.1 0.0 0.039 14.4 0.0 3.0 3 0 0 3 3 3 1 AAA ATPase domain AAA_19 PF13245.6 gi|156936876|ref|YP_001434672.1| - 0.01 16.2 0.9 0.051 13.9 0.0 2.6 3 0 0 3 3 3 0 AAA domain DUF2587 PF10759.9 gi|156936876|ref|YP_001434672.1| - 0.084 12.4 2.2 0.23 11.0 2.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2587) TTRAP PF14203.6 gi|156936876|ref|YP_001434672.1| - 0.19 11.7 5.8 2.9 8.0 0.1 4.6 4 0 0 4 4 4 0 Putative tranposon-transfer assisting protein DUF948 PF06103.11 gi|156936876|ref|YP_001434672.1| - 0.33 11.3 8.2 0.56 10.5 0.1 4.9 6 0 0 6 6 6 0 Bacterial protein of unknown function (DUF948) SOAR PF16533.5 gi|156936876|ref|YP_001434672.1| - 0.51 10.3 8.6 9.4 6.3 0.2 4.2 3 0 0 3 3 3 0 STIM1 Orai1-activating region DUF359 PF04019.12 gi|156936877|ref|YP_001434673.1| - 4.7e-29 100.6 0.0 5.9e-29 100.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) Spt4 PF06093.13 gi|156936878|ref|YP_001434674.1| - 1.1e-10 41.4 0.0 1.4e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger zf-C4_Topoisom PF01396.19 gi|156936878|ref|YP_001434674.1| - 0.0053 16.5 0.4 1.5 8.6 0.0 2.2 2 0 0 2 2 2 2 Topoisomerase DNA binding C4 zinc finger HypA PF01155.19 gi|156936878|ref|YP_001434674.1| - 0.027 14.5 0.1 0.03 14.3 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 gi|156936878|ref|YP_001434674.1| - 0.039 14.0 0.4 0.058 13.4 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|156936878|ref|YP_001434674.1| - 0.061 12.8 0.1 0.061 12.8 0.1 1.6 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|156936878|ref|YP_001434674.1| - 0.13 12.4 3.3 0.36 11.0 3.3 1.7 1 1 1 2 2 2 0 Zinc ribbon domain DUF4776 PF16003.5 gi|156936878|ref|YP_001434674.1| - 0.17 10.9 0.6 0.18 10.8 0.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4776) DUF35_N PF12172.8 gi|156936878|ref|YP_001434674.1| - 1.1 9.2 6.3 5.9 6.9 6.3 2.0 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) SHS2_Rpb7-N PF03876.17 gi|156936879|ref|YP_001434675.1| - 8.8e-18 64.5 0.0 1.5e-17 63.7 0.0 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|156936879|ref|YP_001434675.1| - 2.4e-12 47.0 0.8 4.3e-12 46.2 0.8 1.4 1 0 0 1 1 1 1 S1 RNA binding domain MCR_beta_N PF02783.15 gi|156936879|ref|YP_001434675.1| - 0.0039 16.8 0.0 0.0056 16.3 0.0 1.3 1 0 0 1 1 1 1 Methyl-coenzyme M reductase beta subunit, N-terminal domain RNA_pol_Rbc25 PF08292.12 gi|156936879|ref|YP_001434675.1| - 0.052 13.8 0.0 0.094 13.0 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 PCB_OB PF17092.5 gi|156936879|ref|YP_001434675.1| - 0.15 12.8 0.0 0.25 12.1 0.0 1.4 1 0 0 1 1 1 0 Penicillin-binding protein OB-like domain CoA_binding PF02629.19 gi|156936880|ref|YP_001434676.1| - 5.2e-31 107.2 4.7 6.4e-31 106.9 2.1 2.2 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|156936880|ref|YP_001434676.1| - 2.5e-17 63.1 0.6 4.8e-17 62.2 0.2 1.7 2 0 0 2 2 2 1 CoA-ligase Succ_CoA_lig PF13607.6 gi|156936880|ref|YP_001434676.1| - 7e-15 55.0 0.1 2.2e-14 53.4 0.0 1.8 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|156936880|ref|YP_001434676.1| - 1.5e-10 41.6 0.1 9.1e-10 39.1 0.1 2.1 2 0 0 2 2 2 1 CoA binding domain GFO_IDH_MocA PF01408.22 gi|156936880|ref|YP_001434676.1| - 3.3e-05 24.7 0.3 0.0012 19.6 0.1 2.4 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold Ribul_P_3_epim PF00834.19 gi|156936880|ref|YP_001434676.1| - 0.00049 19.5 0.2 0.00092 18.6 0.2 1.4 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family ATP-grasp_2 PF08442.10 gi|156936881|ref|YP_001434677.1| - 8.7e-63 211.5 3.7 2.8e-62 209.9 0.8 2.0 2 0 0 2 2 2 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|156936881|ref|YP_001434677.1| - 2.5e-20 72.8 0.4 4.6e-20 72.0 0.4 1.4 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 gi|156936881|ref|YP_001434677.1| - 8.9e-16 58.0 5.9 5.9e-15 55.3 1.8 2.9 2 1 0 2 2 2 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|156936881|ref|YP_001434677.1| - 3e-06 26.9 0.7 8.4e-06 25.4 0.0 1.9 2 0 0 2 2 2 1 Carbamoyl-phosphate synthase L chain, ATP binding domain GARS_A PF01071.19 gi|156936881|ref|YP_001434677.1| - 3.7e-06 26.9 0.1 8.2e-06 25.7 0.1 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp PF02222.22 gi|156936881|ref|YP_001434677.1| - 0.00016 21.3 0.0 0.00028 20.5 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain RimK PF08443.11 gi|156936881|ref|YP_001434677.1| - 0.011 15.3 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 RimK-like ATP-grasp domain Succ_CoA_lig PF13607.6 gi|156936881|ref|YP_001434677.1| - 0.14 12.0 0.1 0.29 10.9 0.1 1.6 1 0 0 1 1 1 0 Succinyl-CoA ligase like flavodoxin domain Prefoldin PF02996.17 gi|156936882|ref|YP_001434678.1| - 5.9e-22 77.8 1.0 7.6e-22 77.5 0.6 1.4 1 1 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|156936882|ref|YP_001434678.1| - 9.4e-05 22.3 3.6 0.02 14.8 0.3 2.2 2 0 0 2 2 2 2 Prefoldin subunit Baculo_PEP_C PF04513.12 gi|156936882|ref|YP_001434678.1| - 0.0034 17.4 0.4 2.3 8.3 0.0 2.2 2 0 0 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3450 PF11932.8 gi|156936882|ref|YP_001434678.1| - 0.0043 16.4 0.3 0.27 10.5 0.1 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF3450) BLOC1_2 PF10046.9 gi|156936882|ref|YP_001434678.1| - 0.0066 16.7 2.8 0.45 10.9 0.5 2.4 2 0 0 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4140 PF13600.6 gi|156936882|ref|YP_001434678.1| - 0.0095 16.4 1.9 0.32 11.5 0.1 2.3 2 0 0 2 2 2 1 N-terminal domain of unknown function (DUF4140) DUF4407 PF14362.6 gi|156936882|ref|YP_001434678.1| - 0.013 14.9 0.0 0.022 14.1 0.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) TolA_bind_tri PF16331.5 gi|156936882|ref|YP_001434678.1| - 0.017 15.2 5.3 0.52 10.4 0.8 2.3 2 0 0 2 2 2 0 TolA binding protein trimerisation APG6_N PF17675.1 gi|156936882|ref|YP_001434678.1| - 0.024 15.2 6.0 1.6 9.3 1.0 2.1 2 0 0 2 2 2 0 Apg6 coiled-coil region FlaC_arch PF05377.11 gi|156936882|ref|YP_001434678.1| - 0.026 14.9 3.7 0.67 10.4 0.3 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Ax_dynein_light PF10211.9 gi|156936882|ref|YP_001434678.1| - 0.032 14.2 0.8 0.56 10.1 0.0 2.0 2 0 0 2 2 2 0 Axonemal dynein light chain Sugarporin_N PF11471.8 gi|156936882|ref|YP_001434678.1| - 0.033 14.1 0.1 0.062 13.3 0.1 1.4 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Seryl_tRNA_N PF02403.22 gi|156936882|ref|YP_001434678.1| - 0.042 14.1 2.6 4.3 7.6 0.1 2.4 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Cep57_MT_bd PF06657.13 gi|156936882|ref|YP_001434678.1| - 0.045 14.2 2.7 0.21 12.0 0.2 2.2 2 0 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 KELK PF15796.5 gi|156936882|ref|YP_001434678.1| - 0.047 14.2 2.4 0.9 10.0 0.1 2.1 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF2312 PF10073.9 gi|156936882|ref|YP_001434678.1| - 0.047 13.3 0.5 0.23 11.2 0.1 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2312) DUF4988 PF16378.5 gi|156936882|ref|YP_001434678.1| - 0.049 13.3 2.8 0.083 12.6 0.2 2.3 2 1 0 2 2 2 0 Domain of unknown function Tropomyosin_1 PF12718.7 gi|156936882|ref|YP_001434678.1| - 0.05 13.8 1.6 6.9 6.8 0.5 2.1 2 0 0 2 2 2 0 Tropomyosin like GIT_CC PF16559.5 gi|156936882|ref|YP_001434678.1| - 0.08 12.8 1.9 0.39 10.6 0.1 2.2 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor EF-G-binding_N PF07299.11 gi|156936882|ref|YP_001434678.1| - 0.11 13.0 1.1 0.33 11.5 0.1 2.0 2 0 0 2 2 2 0 Elongation factor G-binding protein, N-terminal NPV_P10 PF05531.12 gi|156936882|ref|YP_001434678.1| - 0.12 12.9 2.0 1.2 9.6 0.1 2.6 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein DUF5320 PF17253.2 gi|156936882|ref|YP_001434678.1| - 0.12 13.4 1.1 4.9 8.3 0.1 2.2 2 0 0 2 2 2 0 Family of unknown function (DUF5320) TPR_MLP1_2 PF07926.12 gi|156936882|ref|YP_001434678.1| - 0.13 12.4 2.5 3 7.9 0.2 2.2 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein DUF1664 PF07889.12 gi|156936882|ref|YP_001434678.1| - 0.13 12.3 0.9 4.2 7.4 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) bZIP_1 PF00170.21 gi|156936882|ref|YP_001434678.1| - 0.19 11.9 5.5 5.3 7.2 0.2 2.2 2 0 0 2 2 2 0 bZIP transcription factor DUF2205 PF10224.9 gi|156936882|ref|YP_001434678.1| - 0.19 11.8 2.7 3.3 7.8 0.1 2.5 2 0 0 2 2 2 0 Short coiled-coil protein GAS PF13851.6 gi|156936882|ref|YP_001434678.1| - 0.21 10.9 4.5 0.39 10.1 0.2 2.1 2 0 0 2 2 2 0 Growth-arrest specific micro-tubule binding CLZ PF16526.5 gi|156936882|ref|YP_001434678.1| - 0.27 11.6 7.4 0.7 10.3 0.7 3.1 2 2 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SlyX PF04102.12 gi|156936882|ref|YP_001434678.1| - 0.69 10.6 3.6 23 5.7 0.2 2.6 2 0 0 2 2 2 0 SlyX ABC_tran_CTD PF16326.5 gi|156936882|ref|YP_001434678.1| - 1.2 9.4 5.6 12 6.2 0.1 2.9 2 1 0 2 2 2 0 ABC transporter C-terminal domain HalX PF08663.10 gi|156936882|ref|YP_001434678.1| - 2.5 8.5 7.6 6.8 7.1 0.6 3.0 2 1 0 2 2 2 0 HalX domain MerR-DNA-bind PF09278.11 gi|156936882|ref|YP_001434678.1| - 7.5 7.2 8.4 33 5.1 2.0 3.1 2 1 1 3 3 3 0 MerR, DNA binding Prefoldin_2 PF01920.20 gi|156936883|ref|YP_001434679.1| - 0.0018 18.2 1.6 0.0023 17.8 1.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit Nrf1_DNA-bind PF10491.9 gi|156936883|ref|YP_001434679.1| - 0.083 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 NLS-binding and DNA-binding and dimerisation domains of Nrf1 Prefoldin PF02996.17 gi|156936883|ref|YP_001434679.1| - 0.14 12.1 1.8 0.33 10.9 0.2 1.9 1 1 1 2 2 2 0 Prefoldin subunit TP_methylase PF00590.20 gi|156936884|ref|YP_001434680.1| - 7.5e-42 143.7 2.8 8.7e-42 143.5 2.8 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases Radical_SAM PF04055.21 gi|156936884|ref|YP_001434680.1| - 0.00052 20.4 0.0 0.00078 19.9 0.0 1.5 1 1 0 1 1 1 1 Radical SAM superfamily HEM4 PF02602.15 gi|156936885|ref|YP_001434681.1| - 1.3e-38 132.7 1.9 1.5e-38 132.5 1.9 1.0 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD 2-Hacid_dh PF00389.30 gi|156936885|ref|YP_001434681.1| - 8.7e-05 22.2 1.2 0.012 15.3 0.1 2.7 2 2 0 2 2 2 2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Nitro_FeMo-Co PF02579.17 gi|156936885|ref|YP_001434681.1| - 0.012 15.9 0.3 4.7 7.6 0.1 3.5 2 1 0 2 2 2 0 Dinitrogenase iron-molybdenum cofactor SepF PF04472.12 gi|156936885|ref|YP_001434681.1| - 0.022 15.0 0.1 0.17 12.1 0.0 2.4 2 0 0 2 2 2 0 Cell division protein SepF NAD_binding_10 PF13460.6 gi|156936885|ref|YP_001434681.1| - 0.069 13.0 3.9 1.1 9.1 0.4 2.3 1 1 0 2 2 2 0 NAD(P)H-binding Glyco_trans_4_5 PF16994.5 gi|156936885|ref|YP_001434681.1| - 0.075 12.6 0.4 0.16 11.6 0.2 1.7 2 0 0 2 2 2 0 Glycosyl-transferase family 4 Chordopox_A30L PF06015.12 gi|156936886|ref|YP_001434682.1| - 0.013 15.3 0.0 0.014 15.2 0.0 1.1 1 0 0 1 1 1 0 Chordopoxvirus A30L protein PIN_5 PF08745.11 gi|156936887|ref|YP_001434683.1| - 2.9e-70 235.9 0.1 3.4e-70 235.7 0.1 1.0 1 0 0 1 1 1 1 PINc domain ribonuclease ThiD2 PF17792.1 gi|156936887|ref|YP_001434683.1| - 0.017 15.6 0.5 0.032 14.7 0.5 1.4 1 0 0 1 1 1 0 ThiD2 family USP8_interact PF08941.10 gi|156936887|ref|YP_001434683.1| - 0.092 12.6 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 USP8 interacting HopA1 PF17914.1 gi|156936887|ref|YP_001434683.1| - 0.15 11.8 0.0 0.25 11.1 0.0 1.3 1 0 0 1 1 1 0 HopA1 effector protein family ABC2_membrane_4 PF12730.7 gi|156936888|ref|YP_001434684.1| - 0.00033 20.7 12.6 0.00033 20.7 12.6 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_3 PF12698.7 gi|156936888|ref|YP_001434684.1| - 0.53 9.3 17.2 0.74 8.9 17.2 1.3 1 0 0 1 1 1 0 ABC-2 family transporter protein CcmE PF03100.15 gi|156936889|ref|YP_001434685.1| - 0.0011 18.9 0.0 0.0014 18.6 0.0 1.1 1 0 0 1 1 1 1 CcmE Rubrerythrin PF02915.17 gi|156936890|ref|YP_001434686.1| - 4.2e-10 40.2 0.9 5.1e-10 39.9 0.9 1.2 1 0 0 1 1 1 1 Rubrerythrin DUF2383 PF09537.10 gi|156936890|ref|YP_001434686.1| - 1.8e-06 28.3 0.8 3.2e-06 27.5 0.3 1.6 1 1 1 2 2 2 1 Domain of unknown function (DUF2383) FliT PF05400.13 gi|156936890|ref|YP_001434686.1| - 0.0053 17.6 0.2 0.0065 17.3 0.2 1.1 1 0 0 1 1 1 1 Flagellar protein FliT Stk19 PF10494.9 gi|156936890|ref|YP_001434686.1| - 0.076 12.7 0.2 0.081 12.6 0.2 1.2 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 DUF2175 PF09943.9 gi|156936890|ref|YP_001434686.1| - 0.4 11.0 2.9 3.2 8.1 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2175) Cpn60_TCP1 PF00118.24 gi|156936891|ref|YP_001434687.1| - 2.2e-177 590.6 18.3 2.5e-177 590.4 18.3 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family FliH PF02108.16 gi|156936891|ref|YP_001434687.1| - 0.0079 16.3 0.2 0.44 10.6 0.2 2.8 1 1 1 2 2 2 2 Flagellar assembly protein FliH CoA_binding_2 PF13380.6 gi|156936891|ref|YP_001434687.1| - 0.034 14.6 1.4 3.2 8.3 0.1 3.7 2 2 1 3 3 3 0 CoA binding domain DUF89 PF01937.19 gi|156936892|ref|YP_001434688.1| - 8.8e-08 31.5 0.0 3.9e-07 29.4 0.0 2.0 1 1 0 1 1 1 1 Protein of unknown function DUF89 Glyco_trans_4_4 PF13579.6 gi|156936893|ref|YP_001434689.1| - 5e-15 56.3 0.3 1.3e-14 54.9 0.3 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_transf_4 PF13439.6 gi|156936893|ref|YP_001434689.1| - 6.3e-14 52.3 0.4 1.3e-13 51.3 0.4 1.4 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|156936893|ref|YP_001434689.1| - 4.1e-05 23.2 0.2 0.00021 20.8 0.1 1.9 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_5 PF08323.11 gi|156936893|ref|YP_001434689.1| - 0.0011 18.7 0.0 0.0017 18.1 0.0 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain TrkA_N PF02254.18 gi|156936893|ref|YP_001434689.1| - 0.16 12.2 0.0 0.88 9.8 0.0 2.1 3 0 0 3 3 3 0 TrkA-N domain HxlR PF01638.17 gi|156936894|ref|YP_001434690.1| - 1.4e-10 40.8 0.4 2.9e-10 39.9 0.2 1.5 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|156936894|ref|YP_001434690.1| - 2.3e-07 30.8 0.3 7.8e-07 29.1 0.2 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|156936894|ref|YP_001434690.1| - 1.3e-06 28.1 0.4 2.9e-06 27.0 0.4 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|156936894|ref|YP_001434690.1| - 1.6e-05 25.2 0.1 2.9e-05 24.3 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_34 PF13601.6 gi|156936894|ref|YP_001434690.1| - 1.7e-05 24.9 0.1 3.2e-05 24.0 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|156936894|ref|YP_001434690.1| - 1.7e-05 24.7 0.1 3.3e-05 23.7 0.1 1.4 1 0 0 1 1 1 1 HTH domain HTH_27 PF13463.6 gi|156936894|ref|YP_001434690.1| - 0.0001 22.7 0.1 0.00021 21.7 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain Replic_Relax PF13814.6 gi|156936894|ref|YP_001434690.1| - 0.00037 20.6 0.0 0.00048 20.2 0.0 1.1 1 0 0 1 1 1 1 Replication-relaxation HTH_45 PF14947.6 gi|156936894|ref|YP_001434690.1| - 0.0011 18.9 0.0 0.0019 18.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix MarR_2 PF12802.7 gi|156936894|ref|YP_001434690.1| - 0.0013 18.5 0.1 0.0024 17.7 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|156936894|ref|YP_001434690.1| - 0.0046 16.5 1.0 0.0081 15.7 0.1 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|156936894|ref|YP_001434690.1| - 0.014 15.4 0.1 0.026 14.5 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|156936894|ref|YP_001434690.1| - 0.015 15.2 0.7 0.015 15.2 0.7 1.8 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Mrr_N PF14338.6 gi|156936894|ref|YP_001434690.1| - 0.041 14.0 0.7 0.18 11.9 0.0 2.2 2 1 1 3 3 3 0 Mrr N-terminal domain Baculo_helicase PF04735.12 gi|156936894|ref|YP_001434690.1| - 0.047 11.2 0.0 0.053 11.1 0.0 1.1 1 0 0 1 1 1 0 Baculovirus DNA helicase Laminin_II PF06009.12 gi|156936894|ref|YP_001434690.1| - 0.054 13.5 1.2 0.35 10.9 1.2 1.9 1 1 0 1 1 1 0 Laminin Domain II DUF1495 PF07381.11 gi|156936894|ref|YP_001434690.1| - 0.091 12.6 0.1 0.14 12.0 0.1 1.5 1 0 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) B-block_TFIIIC PF04182.12 gi|156936894|ref|YP_001434690.1| - 0.11 12.7 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC DUF2250 PF10007.9 gi|156936894|ref|YP_001434690.1| - 0.14 12.3 1.3 0.38 10.9 0.2 2.2 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_43 PF09904.9 gi|156936894|ref|YP_001434690.1| - 0.16 11.9 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Ku_C PF03730.14 gi|156936894|ref|YP_001434690.1| - 0.18 12.5 0.4 2.6 8.8 0.1 2.1 1 1 1 2 2 2 0 Ku70/Ku80 C-terminal arm TFIIE_alpha PF02002.17 gi|156936894|ref|YP_001434690.1| - 0.59 10.0 4.8 0.3 11.0 0.4 2.1 1 1 1 2 2 2 0 TFIIE alpha subunit Peptidase_M24 PF00557.24 gi|156936895|ref|YP_001434691.1| - 2e-57 194.3 0.0 2.6e-57 193.9 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|156936895|ref|YP_001434691.1| - 1.3e-07 32.3 0.0 3e-07 31.2 0.0 1.7 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Snf7 PF03357.21 gi|156936896|ref|YP_001434692.1| - 0.00013 21.6 5.2 0.00018 21.1 5.2 1.2 1 0 0 1 1 1 1 Snf7 Baculo_PEP_C PF04513.12 gi|156936896|ref|YP_001434692.1| - 0.11 12.5 0.0 0.2 11.7 0.0 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus MutS_III PF05192.18 gi|156936896|ref|YP_001434692.1| - 0.32 11.2 2.5 0.63 10.2 0.3 2.1 1 1 1 2 2 2 0 MutS domain III DUF2203 PF09969.9 gi|156936896|ref|YP_001434692.1| - 1.5 9.6 5.5 18 6.1 1.5 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Spc24 PF08286.11 gi|156936896|ref|YP_001434692.1| - 1.8 8.9 5.7 1.3 9.3 1.5 2.3 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 Seryl_tRNA_N PF02403.22 gi|156936896|ref|YP_001434692.1| - 3.8 7.8 12.6 0.63 10.3 4.3 2.6 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain CCG PF02754.16 gi|156936897|ref|YP_001434693.1| - 1.6e-12 47.5 0.1 4e-12 46.2 0.1 1.7 1 0 0 1 1 1 1 Cysteine-rich domain Fer4_10 PF13237.6 gi|156936897|ref|YP_001434693.1| - 5.7e-07 29.6 7.4 5.7e-07 29.6 7.4 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|156936897|ref|YP_001434693.1| - 0.00051 20.5 10.1 0.085 13.4 0.5 3.2 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156936897|ref|YP_001434693.1| - 0.00072 19.7 12.9 0.00086 19.4 9.5 2.5 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156936897|ref|YP_001434693.1| - 0.00088 19.8 16.1 0.0028 18.2 12.3 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156936897|ref|YP_001434693.1| - 0.0017 18.1 16.1 0.05 13.4 1.1 2.8 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|156936897|ref|YP_001434693.1| - 0.003 18.0 16.2 0.014 15.8 11.7 3.0 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156936897|ref|YP_001434693.1| - 0.057 13.5 16.1 0.34 11.1 3.4 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156936897|ref|YP_001434693.1| - 0.15 12.3 17.8 0.087 13.0 3.1 3.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156936897|ref|YP_001434693.1| - 0.21 11.7 16.3 0.11 12.6 2.4 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156936897|ref|YP_001434693.1| - 0.22 12.1 16.5 0.22 12.1 1.4 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|156936897|ref|YP_001434693.1| - 0.56 11.3 17.1 0.45 11.6 5.7 2.8 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_15 PF13459.6 gi|156936897|ref|YP_001434693.1| - 0.69 10.7 3.0 8.1 7.3 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_16 PF13484.6 gi|156936897|ref|YP_001434693.1| - 1.5 9.8 15.6 2.8 8.9 1.8 3.1 2 1 1 4 4 4 0 4Fe-4S double cluster binding domain Ribosomal_S27e PF01667.17 gi|156936898|ref|YP_001434694.1| - 3e-21 74.9 0.2 3.4e-21 74.7 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 Auto_anti-p27 PF06677.12 gi|156936898|ref|YP_001434694.1| - 0.00087 19.4 0.8 0.032 14.4 0.1 2.1 2 0 0 2 2 2 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) TF_Zn_Ribbon PF08271.12 gi|156936898|ref|YP_001434694.1| - 0.0015 18.0 0.7 0.0021 17.6 0.7 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding PADR1 PF08063.12 gi|156936898|ref|YP_001434694.1| - 0.015 15.1 1.0 0.026 14.3 1.0 1.4 1 1 0 1 1 1 0 PADR1 (NUC008) domain DNA_ligase_ZBD PF03119.16 gi|156936898|ref|YP_001434694.1| - 0.02 14.9 3.2 0.097 12.7 0.1 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain CcmH PF03918.14 gi|156936898|ref|YP_001434694.1| - 0.045 13.1 0.1 0.053 12.8 0.1 1.2 1 0 0 1 1 1 0 Cytochrome C biogenesis protein DZR PF12773.7 gi|156936898|ref|YP_001434694.1| - 0.056 13.5 1.3 0.26 11.4 1.5 1.7 1 1 1 2 2 2 0 Double zinc ribbon DUF3797 PF12677.7 gi|156936898|ref|YP_001434694.1| - 0.087 12.7 0.4 0.26 11.2 0.4 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) ThiC_Rad_SAM PF01964.18 gi|156936899|ref|YP_001434695.1| - 1.4e-177 590.7 0.0 1.6e-177 590.5 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family DUF763 PF05559.11 gi|156936900|ref|YP_001434696.1| - 1.3e-112 376.0 0.0 5e-112 374.1 0.0 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF763) ABC_tran PF00005.27 gi|156936901|ref|YP_001434697.1| - 3.1e-35 121.7 0.0 4.3e-35 121.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|156936901|ref|YP_001434697.1| - 5.2e-10 39.1 0.3 4.5e-08 32.8 0.3 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|156936901|ref|YP_001434697.1| - 2.6e-09 37.4 0.0 0.0014 18.5 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_ATPase PF09818.9 gi|156936901|ref|YP_001434697.1| - 1.3e-05 24.2 0.1 0.018 13.8 0.0 2.2 2 0 0 2 2 2 2 Predicted ATPase of the ABC class AAA_29 PF13555.6 gi|156936901|ref|YP_001434697.1| - 1.8e-05 24.4 0.0 3.2e-05 23.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|156936901|ref|YP_001434697.1| - 2.5e-05 24.9 1.7 6e-05 23.6 1.7 1.9 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|156936901|ref|YP_001434697.1| - 7.5e-05 23.0 0.0 0.00025 21.3 0.0 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|156936901|ref|YP_001434697.1| - 0.00081 19.3 0.1 0.0019 18.1 0.1 1.6 1 0 0 1 1 1 1 RsgA GTPase Rad17 PF03215.15 gi|156936901|ref|YP_001434697.1| - 0.00084 19.3 0.0 0.0011 18.9 0.0 1.3 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_30 PF13604.6 gi|156936901|ref|YP_001434697.1| - 0.0012 18.6 0.1 0.0041 16.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_27 PF13514.6 gi|156936901|ref|YP_001434697.1| - 0.0018 17.9 0.0 0.0032 17.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|156936901|ref|YP_001434697.1| - 0.0023 18.3 0.0 0.0046 17.4 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 gi|156936901|ref|YP_001434697.1| - 0.0023 17.7 0.2 0.13 12.0 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 gi|156936901|ref|YP_001434697.1| - 0.0025 18.4 0.1 0.035 14.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain Adeno_IVa2 PF02456.15 gi|156936901|ref|YP_001434697.1| - 0.012 14.4 0.2 0.027 13.3 0.1 1.6 2 0 0 2 2 2 0 Adenovirus IVa2 protein NACHT PF05729.12 gi|156936901|ref|YP_001434697.1| - 0.012 15.5 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 NACHT domain NB-ARC PF00931.22 gi|156936901|ref|YP_001434697.1| - 0.015 14.5 0.1 0.021 14.0 0.1 1.5 1 1 0 1 1 1 0 NB-ARC domain AAA PF00004.29 gi|156936901|ref|YP_001434697.1| - 0.02 15.3 0.2 0.27 11.7 0.2 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 gi|156936901|ref|YP_001434697.1| - 0.023 13.7 0.0 0.041 12.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_PrkA PF08298.11 gi|156936901|ref|YP_001434697.1| - 0.025 13.5 0.0 0.041 12.8 0.0 1.3 1 0 0 1 1 1 0 PrkA AAA domain DUF3987 PF13148.6 gi|156936901|ref|YP_001434697.1| - 0.032 13.3 0.2 0.065 12.2 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3987) ATPase_2 PF01637.18 gi|156936901|ref|YP_001434697.1| - 0.037 13.9 1.8 0.051 13.5 0.0 2.0 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea Cytidylate_kin PF02224.18 gi|156936901|ref|YP_001434697.1| - 0.041 13.6 0.0 0.088 12.5 0.0 1.6 1 0 0 1 1 1 0 Cytidylate kinase AAA_14 PF13173.6 gi|156936901|ref|YP_001434697.1| - 0.046 13.8 0.0 0.13 12.3 0.0 1.7 1 1 1 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|156936901|ref|YP_001434697.1| - 0.051 13.7 0.3 0.095 12.8 0.3 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_24 PF13479.6 gi|156936901|ref|YP_001434697.1| - 0.088 12.5 0.1 0.23 11.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain PRK PF00485.18 gi|156936901|ref|YP_001434697.1| - 0.095 12.4 0.0 0.2 11.4 0.0 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_28 PF13521.6 gi|156936901|ref|YP_001434697.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF5444 PF17519.2 gi|156936901|ref|YP_001434697.1| - 0.12 12.4 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5444) RNA_helicase PF00910.22 gi|156936901|ref|YP_001434697.1| - 0.16 12.3 0.0 0.44 10.9 0.0 1.8 2 0 0 2 2 1 0 RNA helicase AAA_33 PF13671.6 gi|156936901|ref|YP_001434697.1| - 0.18 12.0 0.0 0.34 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain BPD_transp_1 PF00528.22 gi|156936902|ref|YP_001434698.1| - 7.9e-11 42.0 14.4 7.9e-11 42.0 14.4 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component CECR6_TMEM121 PF14997.6 gi|156936902|ref|YP_001434698.1| - 0.04 13.7 4.3 0.29 10.9 0.3 2.5 2 1 1 3 3 3 0 CECR6/TMEM121 family BPD_transp_1 PF00528.22 gi|156936903|ref|YP_001434699.1| - 1.8e-11 44.1 18.7 1.8e-11 44.1 18.7 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DctQ PF04290.12 gi|156936903|ref|YP_001434699.1| - 0.16 11.9 18.6 0.82 9.6 7.9 3.3 3 1 1 4 4 4 0 Tripartite ATP-independent periplasmic transporters, DctQ component Peptidase_M50 PF02163.22 gi|156936904|ref|YP_001434700.1| - 1.1e-06 28.1 10.5 0.0011 18.3 0.8 3.1 1 1 1 2 2 2 2 Peptidase family M50 tRNA_bind PF01588.20 gi|156936905|ref|YP_001434701.1| - 1.2e-28 99.0 0.1 1.4e-28 98.9 0.1 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain Hist_deacetyl PF00850.19 gi|156936906|ref|YP_001434702.1| - 3e-61 207.6 0.0 5e-61 206.8 0.0 1.3 1 1 0 1 1 1 1 Histone deacetylase domain B12-binding PF02310.19 gi|156936906|ref|YP_001434702.1| - 0.0015 18.6 0.1 0.0071 16.4 0.0 2.1 2 0 0 2 2 2 1 B12 binding domain CbiA PF01656.23 gi|156936906|ref|YP_001434702.1| - 0.08 13.0 0.0 0.092 12.8 0.0 1.3 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AP_endonuc_2 PF01261.24 gi|156936907|ref|YP_001434703.1| - 0.00061 19.3 0.0 0.00093 18.7 0.0 1.2 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel PQQ PF01011.21 gi|156936909|ref|YP_001434705.1| - 0.2 11.6 3.5 1.9 8.6 0.1 4.0 5 0 0 5 5 5 0 PQQ enzyme repeat ThiF PF00899.21 gi|156936910|ref|YP_001434706.1| - 6.2e-10 38.9 0.0 3e-08 33.3 0.0 2.0 1 1 0 1 1 1 1 ThiF family zf-B_box PF00643.24 gi|156936911|ref|YP_001434707.1| - 8.1e-05 22.7 24.3 0.0027 17.8 4.2 3.7 3 1 1 4 4 4 2 B-box zinc finger DUF2180 PF09947.9 gi|156936911|ref|YP_001434707.1| - 0.00096 19.1 4.6 0.00096 19.1 4.6 3.4 1 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2180) DZR PF12773.7 gi|156936911|ref|YP_001434707.1| - 0.0021 18.1 28.0 0.0077 16.2 10.4 3.2 2 1 0 2 2 2 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|156936911|ref|YP_001434707.1| - 0.085 12.6 0.9 0.085 12.6 0.9 4.1 3 2 0 3 3 3 0 zinc-ribbon domain C5HCH PF17982.1 gi|156936911|ref|YP_001434707.1| - 0.32 11.2 26.2 0.98 9.6 3.9 3.2 2 1 1 3 3 3 0 NSD Cys-His rich domain FYVE PF01363.21 gi|156936911|ref|YP_001434707.1| - 0.61 10.3 29.9 0.069 13.3 12.5 3.4 1 1 1 2 2 2 0 FYVE zinc finger Rhodanese_C PF12368.8 gi|156936911|ref|YP_001434707.1| - 6.2 7.3 27.6 20 5.7 13.5 2.4 1 1 1 2 2 2 0 Rhodanase C-terminal ABC_tran PF00005.27 gi|156936913|ref|YP_001434709.1| - 1.3e-32 113.2 0.0 2e-32 112.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156936913|ref|YP_001434709.1| - 1.5e-13 51.2 0.0 4e-06 26.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156936913|ref|YP_001434709.1| - 4.7e-09 36.0 0.1 0.00086 18.8 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 gi|156936913|ref|YP_001434709.1| - 2.4e-05 24.5 0.1 0.00066 19.9 0.1 2.2 1 1 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|156936913|ref|YP_001434709.1| - 0.00018 21.8 0.2 0.0018 18.6 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|156936913|ref|YP_001434709.1| - 0.00025 20.7 0.1 0.00051 19.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|156936913|ref|YP_001434709.1| - 0.0015 19.0 0.1 0.0032 18.0 0.1 1.4 1 0 0 1 1 1 1 AAA domain AAA_27 PF13514.6 gi|156936913|ref|YP_001434709.1| - 0.0017 18.0 0.0 0.0027 17.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156936913|ref|YP_001434709.1| - 0.0017 18.1 0.1 0.6 9.8 0.0 2.1 2 0 0 2 2 2 2 AAA domain MMR_HSR1 PF01926.23 gi|156936913|ref|YP_001434709.1| - 0.0025 17.9 0.0 0.006 16.7 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|156936913|ref|YP_001434709.1| - 0.0052 16.7 0.5 0.026 14.4 0.1 2.2 1 1 1 3 3 3 1 RsgA GTPase ABC_ATPase PF09818.9 gi|156936913|ref|YP_001434709.1| - 0.0079 15.0 0.1 0.78 8.5 0.1 2.3 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_13 PF13166.6 gi|156936913|ref|YP_001434709.1| - 0.021 13.5 0.1 2.4 6.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|156936913|ref|YP_001434709.1| - 0.021 13.7 0.0 0.037 12.9 0.0 1.4 2 0 0 2 2 2 0 AAA-like domain Zot PF05707.12 gi|156936913|ref|YP_001434709.1| - 0.023 14.4 0.0 0.038 13.6 0.0 1.4 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) AAA_16 PF13191.6 gi|156936913|ref|YP_001434709.1| - 0.027 14.9 0.0 0.043 14.2 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 gi|156936913|ref|YP_001434709.1| - 0.053 13.4 0.3 0.3 11.0 0.3 2.0 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|156936913|ref|YP_001434709.1| - 0.054 13.1 0.5 0.26 10.9 0.1 2.1 2 1 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|156936913|ref|YP_001434709.1| - 0.061 13.0 0.0 0.61 9.7 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain Dynamin_N PF00350.23 gi|156936913|ref|YP_001434709.1| - 0.061 13.4 0.2 0.24 11.5 0.1 1.8 2 0 0 2 2 2 0 Dynamin family AAA PF00004.29 gi|156936913|ref|YP_001434709.1| - 0.062 13.7 0.7 1.2 9.5 0.7 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|156936913|ref|YP_001434709.1| - 0.088 12.7 0.0 0.77 9.6 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_24 PF13479.6 gi|156936913|ref|YP_001434709.1| - 0.09 12.5 0.1 0.24 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|156936913|ref|YP_001434709.1| - 0.093 11.9 0.0 0.2 10.8 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|156936913|ref|YP_001434709.1| - 0.094 12.8 0.1 1.3 9.0 0.0 2.1 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|156936913|ref|YP_001434709.1| - 0.15 11.6 0.1 0.39 10.3 0.1 1.7 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 gi|156936913|ref|YP_001434709.1| - 0.18 11.7 0.2 0.41 10.5 0.1 1.6 2 0 0 2 2 2 0 NACHT domain tRNA_int_endo PF01974.17 gi|156936915|ref|YP_001434711.1| - 8.7e-30 102.6 0.1 1.3e-29 102.1 0.1 1.2 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|156936915|ref|YP_001434711.1| - 8.7e-20 70.2 0.0 1.6e-19 69.3 0.0 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain tRNA_int_end_N2 PF12928.7 gi|156936915|ref|YP_001434711.1| - 0.00051 20.2 0.0 0.00094 19.3 0.0 1.5 1 0 0 1 1 1 1 tRNA-splicing endonuclease subunit sen54 N-term Spc7 PF08317.11 gi|156936916|ref|YP_001434712.1| - 0.027 13.3 0.5 0.027 13.3 0.5 1.9 2 0 0 2 2 2 0 Spc7 kinetochore protein PhoU PF01895.19 gi|156936916|ref|YP_001434712.1| - 0.65 10.5 9.3 0.9 10.0 0.6 3.2 2 2 1 3 3 3 0 PhoU domain AsnC_trans_reg PF01037.21 gi|156936917|ref|YP_001434713.1| - 4.3e-14 52.2 0.3 1.2e-13 50.8 0.1 1.8 2 0 0 2 2 2 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|156936917|ref|YP_001434713.1| - 7.9e-13 47.7 2.8 1.6e-12 46.7 2.8 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|156936917|ref|YP_001434713.1| - 6.6e-08 32.2 0.3 6.6e-08 32.2 0.3 1.7 2 0 0 2 2 1 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|156936917|ref|YP_001434713.1| - 7.1e-08 32.3 2.3 1.2e-07 31.6 0.7 2.2 3 0 0 3 3 3 1 HTH domain TFIIE_alpha PF02002.17 gi|156936917|ref|YP_001434713.1| - 9.1e-07 28.7 1.9 0.00028 20.7 0.3 2.2 2 0 0 2 2 2 2 TFIIE alpha subunit HTH_DeoR PF08220.12 gi|156936917|ref|YP_001434713.1| - 1.4e-06 28.0 0.7 1.4e-06 28.0 0.7 1.7 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|156936917|ref|YP_001434713.1| - 5.3e-06 26.2 1.0 0.00026 20.8 0.1 2.6 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|156936917|ref|YP_001434713.1| - 2.5e-05 24.1 0.6 5.3e-05 23.1 0.2 1.8 2 0 0 2 2 1 1 MarR family HTH_5 PF01022.20 gi|156936917|ref|YP_001434713.1| - 2.6e-05 24.0 0.0 6.2e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|156936917|ref|YP_001434713.1| - 0.00017 21.4 0.0 0.00053 19.8 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_Mga PF08280.11 gi|156936917|ref|YP_001434713.1| - 0.00027 20.9 1.4 0.0005 20.0 0.7 1.8 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_Crp_2 PF13545.6 gi|156936917|ref|YP_001434713.1| - 0.00039 20.3 0.5 0.002 18.1 0.3 2.1 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain Mga PF05043.13 gi|156936917|ref|YP_001434713.1| - 0.00096 19.7 0.6 0.0029 18.1 0.2 1.9 2 1 0 2 2 2 1 Mga helix-turn-helix domain AsnC_trans_reg2 PF17805.1 gi|156936917|ref|YP_001434713.1| - 0.0019 18.3 0.0 0.0063 16.6 0.0 1.9 1 1 0 1 1 1 1 AsnC-like ligand binding domain Rrf2 PF02082.20 gi|156936917|ref|YP_001434713.1| - 0.0019 18.5 0.2 0.0063 16.8 0.1 1.8 2 0 0 2 2 2 1 Transcriptional regulator HTH_27 PF13463.6 gi|156936917|ref|YP_001434713.1| - 0.0027 18.2 0.1 0.0054 17.2 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain FaeA PF04703.12 gi|156936917|ref|YP_001434713.1| - 0.0035 17.7 0.0 0.0089 16.4 0.0 1.7 1 0 0 1 1 1 1 FaeA-like protein HTH_20 PF12840.7 gi|156936917|ref|YP_001434713.1| - 0.0044 17.1 0.0 0.016 15.3 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain Ribosomal_S25 PF03297.15 gi|156936917|ref|YP_001434713.1| - 0.0072 16.5 1.7 0.049 13.8 0.2 2.1 2 0 0 2 2 2 1 S25 ribosomal protein Fe_dep_repress PF01325.19 gi|156936917|ref|YP_001434713.1| - 0.0073 16.5 0.1 0.028 14.6 0.0 1.9 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_39 PF14090.6 gi|156936917|ref|YP_001434713.1| - 0.016 15.0 0.1 0.048 13.4 0.1 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|156936917|ref|YP_001434713.1| - 0.021 14.5 0.2 0.36 10.5 0.1 2.3 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|156936917|ref|YP_001434713.1| - 0.023 14.5 0.0 0.061 13.1 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain HTH_28 PF13518.6 gi|156936917|ref|YP_001434713.1| - 0.035 14.2 0.0 0.085 13.0 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_12 PF08461.10 gi|156936917|ref|YP_001434713.1| - 0.039 13.9 1.0 0.079 12.9 0.2 1.9 2 0 0 2 2 1 0 Ribonuclease R winged-helix domain HTH_34 PF13601.6 gi|156936917|ref|YP_001434713.1| - 0.06 13.5 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_10 PF04967.12 gi|156936917|ref|YP_001434713.1| - 0.065 13.0 0.1 0.14 11.9 0.1 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_36 PF13730.6 gi|156936917|ref|YP_001434713.1| - 0.073 13.0 0.3 0.16 11.9 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|156936917|ref|YP_001434713.1| - 0.077 12.5 1.9 0.11 12.1 0.1 2.2 3 0 0 3 3 2 0 Sigma-70, region 4 RICTOR_phospho PF14665.6 gi|156936917|ref|YP_001434713.1| - 0.1 12.9 0.2 0.62 10.4 0.1 2.1 2 1 0 2 2 2 0 Rapamycin-insensitive companion of mTOR, phosphorylation-site EAP30 PF04157.16 gi|156936917|ref|YP_001434713.1| - 0.13 11.5 0.0 0.24 10.6 0.0 1.4 1 0 0 1 1 1 0 EAP30/Vps36 family HTH_Tnp_ISL3 PF13542.6 gi|156936917|ref|YP_001434713.1| - 0.17 11.4 0.2 0.51 9.8 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 DUF2551 PF10826.8 gi|156936917|ref|YP_001434713.1| - 0.59 10.4 3.2 0.75 10.1 0.2 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2551) GATase_4 PF13230.6 gi|156936918|ref|YP_001434714.1| - 0.0052 15.7 0.0 0.0089 14.9 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferases class-II T2SSF PF00482.23 gi|156936918|ref|YP_001434714.1| - 0.11 12.5 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 Type II secretion system (T2SS), protein F GATase_6 PF13522.6 gi|156936918|ref|YP_001434714.1| - 0.13 12.5 0.0 0.21 11.8 0.0 1.5 1 1 0 1 1 1 0 Glutamine amidotransferase domain TPR_10 PF13374.6 gi|156936919|ref|YP_001434715.1| - 0.064 13.2 0.0 6.7 6.7 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 gi|156936919|ref|YP_001434715.1| - 0.1 12.3 0.2 0.19 11.5 0.2 1.4 1 0 0 1 1 1 0 TPR repeat TPR_8 PF13181.6 gi|156936919|ref|YP_001434715.1| - 0.14 12.4 0.6 1.7 9.1 0.2 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Rhomboid PF01694.22 gi|156936920|ref|YP_001434716.1| - 3e-34 118.2 15.2 3e-34 118.2 15.2 1.4 2 0 0 2 2 2 1 Rhomboid family DUF1751 PF08551.10 gi|156936920|ref|YP_001434716.1| - 0.029 14.9 2.0 0.043 14.4 0.3 2.2 2 1 0 2 2 2 0 Eukaryotic integral membrane protein (DUF1751) DUF505 PF04458.12 gi|156936921|ref|YP_001434717.1| - 4.2e-176 587.0 5.2 5.2e-176 586.7 5.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF505) PadR PF03551.14 gi|156936921|ref|YP_001434717.1| - 7.4e-08 32.2 2.8 0.083 12.9 0.8 3.9 4 0 0 4 4 4 3 Transcriptional regulator PadR-like family HxlR PF01638.17 gi|156936921|ref|YP_001434717.1| - 1.4e-05 24.8 0.5 0.56 10.1 0.1 4.1 4 0 0 4 4 4 2 HxlR-like helix-turn-helix HTH_45 PF14947.6 gi|156936921|ref|YP_001434717.1| - 5e-05 23.2 0.0 6.1 6.9 0.0 4.1 4 0 0 4 4 4 2 Winged helix-turn-helix PaaX PF07848.12 gi|156936921|ref|YP_001434717.1| - 0.00035 20.7 0.2 0.088 13.0 0.0 3.1 3 0 0 3 3 3 1 PaaX-like protein DUF4364 PF14277.6 gi|156936921|ref|YP_001434717.1| - 0.0078 16.0 0.0 3.6 7.3 0.0 3.1 3 0 0 3 3 3 1 Domain of unknown function (DUF4364) DUF1495 PF07381.11 gi|156936921|ref|YP_001434717.1| - 0.027 14.3 0.1 16 5.4 0.0 3.2 3 0 0 3 3 3 0 Winged helix DNA-binding domain (DUF1495) UBA PF00627.31 gi|156936921|ref|YP_001434717.1| - 0.047 13.6 0.3 0.99 9.4 0.0 3.3 3 0 0 3 3 3 0 UBA/TS-N domain Glycos_trans_3N PF02885.17 gi|156936921|ref|YP_001434717.1| - 0.073 12.9 0.0 0.18 11.7 0.0 1.7 1 0 0 1 1 1 0 Glycosyl transferase family, helical bundle domain SpoU_methylase PF00588.19 gi|156936922|ref|YP_001434718.1| - 5.8e-30 104.3 0.0 7.6e-30 103.9 0.0 1.2 1 0 0 1 1 1 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.9 gi|156936922|ref|YP_001434718.1| - 0.016 15.1 0.0 0.05 13.5 0.0 1.9 1 1 0 1 1 1 0 SAM-dependent RNA methyltransferase MarC PF01914.17 gi|156936923|ref|YP_001434719.1| - 1e-36 126.3 15.5 1.2e-36 126.0 15.5 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein ETRAMP PF09716.10 gi|156936923|ref|YP_001434719.1| - 0.41 10.8 0.0 0.41 10.8 0.0 2.3 3 0 0 3 3 3 0 Malarial early transcribed membrane protein (ETRAMP) Helicase_RecD PF05127.14 gi|156936924|ref|YP_001434720.1| - 1.2e-55 188.1 0.0 2.1e-55 187.3 0.0 1.4 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|156936924|ref|YP_001434720.1| - 5e-39 134.0 0.0 3.1e-27 95.5 0.0 2.2 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|156936924|ref|YP_001434720.1| - 2.5e-27 94.6 0.0 8.6e-27 92.9 0.0 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1726) tRNA_bind_2 PF13725.6 gi|156936924|ref|YP_001434720.1| - 3.4e-06 26.9 0.0 8.1e-06 25.7 0.0 1.5 1 1 0 1 1 1 1 Possible tRNA binding domain Acetyltransf_1 PF00583.25 gi|156936924|ref|YP_001434720.1| - 9.1e-05 22.7 0.0 0.00022 21.4 0.0 1.7 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|156936924|ref|YP_001434720.1| - 0.0046 17.3 0.0 0.022 15.2 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain MerR PF00376.23 gi|156936924|ref|YP_001434720.1| - 0.059 13.2 0.0 0.13 12.1 0.0 1.6 1 0 0 1 1 1 0 MerR family regulatory protein Acetyltransf_10 PF13673.7 gi|156936924|ref|YP_001434720.1| - 0.094 12.7 0.0 0.39 10.7 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain TatD_DNase PF01026.21 gi|156936925|ref|YP_001434721.1| - 5.6e-41 140.6 0.1 1.8e-40 138.9 0.1 1.7 1 1 0 1 1 1 1 TatD related DNase Amidohydro_1 PF01979.20 gi|156936925|ref|YP_001434721.1| - 0.026 13.8 0.0 0.23 10.7 0.0 2.2 1 1 1 2 2 2 0 Amidohydrolase family HD_2 PF12917.7 gi|156936926|ref|YP_001434722.1| - 5.1e-12 45.9 0.0 8.5e-12 45.2 0.0 1.4 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme HD_3 PF13023.6 gi|156936926|ref|YP_001434722.1| - 4.5e-10 39.7 0.0 8.5e-10 38.8 0.0 1.4 1 1 0 1 1 1 1 HD domain HD PF01966.22 gi|156936926|ref|YP_001434722.1| - 0.00049 20.3 0.2 0.0017 18.6 0.1 2.0 1 1 1 2 2 2 1 HD domain Fe-ADH PF00465.19 gi|156936927|ref|YP_001434723.1| - 1e-123 412.8 0.0 1.1e-123 412.6 0.0 1.0 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|156936927|ref|YP_001434723.1| - 8.2e-15 55.2 0.0 3.7e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase PAPS_reduct PF01507.19 gi|156936928|ref|YP_001434724.1| - 2.9e-26 92.5 0.0 4.9e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family QueC PF06508.13 gi|156936928|ref|YP_001434724.1| - 7.6e-06 25.6 0.0 1.1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|156936928|ref|YP_001434724.1| - 0.015 15.1 0.0 0.024 14.4 0.0 1.4 1 0 0 1 1 1 0 PP-loop family ubiquitin PF00240.23 gi|156936931|ref|YP_001434727.1| - 0.18 11.6 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin family Flagellin_D3 PF08884.11 gi|156936932|ref|YP_001434728.1| - 0.18 12.2 3.1 2.3 8.7 0.1 2.4 2 0 0 2 2 2 0 Flagellin D3 domain ThiF PF00899.21 gi|156936933|ref|YP_001434729.1| - 3.8e-24 85.4 0.0 4.5e-24 85.1 0.0 1.1 1 0 0 1 1 1 1 ThiF family 2-Hacid_dh_C PF02826.19 gi|156936933|ref|YP_001434729.1| - 0.0017 17.8 0.1 0.021 14.2 0.0 2.1 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Polysacc_synt_2 PF02719.15 gi|156936933|ref|YP_001434729.1| - 0.0028 16.9 0.0 0.0038 16.4 0.0 1.2 1 0 0 1 1 1 1 Polysaccharide biosynthesis protein Shikimate_DH PF01488.20 gi|156936933|ref|YP_001434729.1| - 0.0034 17.5 0.0 0.2 11.7 0.0 2.2 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|156936933|ref|YP_001434729.1| - 0.012 15.8 0.1 0.86 9.9 0.1 2.2 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain TrkA_N PF02254.18 gi|156936933|ref|YP_001434729.1| - 0.02 15.2 0.1 0.043 14.1 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain Prok-RING_4 PF14447.6 gi|156936933|ref|YP_001434729.1| - 0.049 13.5 0.1 2.8 7.9 0.0 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 4 3Beta_HSD PF01073.19 gi|156936933|ref|YP_001434729.1| - 0.1 11.6 0.3 0.18 10.8 0.3 1.3 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family zf-Di19 PF05605.12 gi|156936933|ref|YP_001434729.1| - 0.1 12.9 0.1 20 5.6 0.0 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding NAD_binding_7 PF13241.6 gi|156936933|ref|YP_001434729.1| - 0.13 12.7 0.0 0.26 11.8 0.0 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding zf-C3HC4_3 PF13920.6 gi|156936933|ref|YP_001434729.1| - 0.15 12.0 0.1 12 5.8 0.0 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn-C2H2_12 PF18112.1 gi|156936933|ref|YP_001434729.1| - 0.59 10.6 4.4 6.3 7.4 0.2 2.4 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain Peripla_BP_6 PF13458.6 gi|156936934|ref|YP_001434730.1| - 3.2e-35 122.4 0.8 4e-35 122.1 0.8 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 gi|156936934|ref|YP_001434730.1| - 1.3e-27 96.9 0.1 1.7e-27 96.5 0.1 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region Peripla_BP_5 PF13433.6 gi|156936934|ref|YP_001434730.1| - 9.3e-05 21.6 0.1 0.00022 20.3 0.0 1.6 2 0 0 2 2 2 1 Periplasmic binding protein domain LppC PF04348.13 gi|156936934|ref|YP_001434730.1| - 0.0026 16.6 0.0 0.0041 16.0 0.0 1.2 1 0 0 1 1 1 1 LppC putative lipoprotein PUA_3 PF17785.1 gi|156936934|ref|YP_001434730.1| - 0.067 13.0 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 PUA-like domain Peripla_BP_6 PF13458.6 gi|156936935|ref|YP_001434731.1| - 1.6e-29 103.6 0.0 2e-29 103.4 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein ANF_receptor PF01094.28 gi|156936935|ref|YP_001434731.1| - 9.9e-22 77.5 0.0 1.3e-21 77.1 0.0 1.1 1 0 0 1 1 1 1 Receptor family ligand binding region DUF4262 PF14081.6 gi|156936936|ref|YP_001434732.1| - 0.013 15.7 0.0 0.02 15.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4262) PIN_3 PF13470.6 gi|156936937|ref|YP_001434733.1| - 0.0022 18.8 0.1 0.0074 17.0 0.1 1.9 1 1 0 1 1 1 1 PIN domain Usp PF00582.26 gi|156936939|ref|YP_001434735.1| - 8.3e-31 107.4 0.7 9.5e-31 107.2 0.7 1.0 1 0 0 1 1 1 1 Universal stress protein family DNA_photolyase PF00875.18 gi|156936939|ref|YP_001434735.1| - 0.054 13.5 0.0 0.082 12.9 0.0 1.2 1 0 0 1 1 1 0 DNA photolyase ResIII PF04851.15 gi|156936940|ref|YP_001434736.1| - 8.8e-20 71.4 0.0 2.2e-19 70.1 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|156936940|ref|YP_001434736.1| - 2.6e-16 59.9 0.0 7.8e-16 58.3 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|156936940|ref|YP_001434736.1| - 3.1e-11 43.6 0.0 5.6e-08 33.1 0.0 2.6 2 1 0 2 2 2 2 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 gi|156936940|ref|YP_001434736.1| - 0.00021 20.6 0.0 0.00038 19.8 0.0 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_19 PF13245.6 gi|156936940|ref|YP_001434736.1| - 0.031 14.6 0.0 0.065 13.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|156936940|ref|YP_001434736.1| - 0.039 13.0 0.0 0.15 11.1 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_11 PF13086.6 gi|156936940|ref|YP_001434736.1| - 0.076 12.8 0.0 7 6.4 0.0 2.3 1 1 1 2 2 2 0 AAA domain Helicase_RecD PF05127.14 gi|156936940|ref|YP_001434736.1| - 0.089 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Helicase DUF2075 PF09848.9 gi|156936940|ref|YP_001434736.1| - 0.16 11.2 0.0 0.46 9.7 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ABC_tran PF00005.27 gi|156936941|ref|YP_001434737.1| - 4e-33 114.8 0.0 5.9e-33 114.3 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156936941|ref|YP_001434737.1| - 1.6e-10 41.3 0.0 6.2e-07 29.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4162 PF13732.6 gi|156936941|ref|YP_001434737.1| - 2.4e-08 34.6 0.0 6.5e-08 33.2 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_15 PF13175.6 gi|156936941|ref|YP_001434737.1| - 0.00019 21.2 0.0 0.39 10.4 0.0 2.4 2 1 1 3 3 3 2 AAA ATPase domain SMC_N PF02463.19 gi|156936941|ref|YP_001434737.1| - 0.0033 16.9 0.0 0.038 13.4 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|156936941|ref|YP_001434737.1| - 0.0059 17.0 0.0 5.1 7.5 0.0 2.6 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|156936941|ref|YP_001434737.1| - 0.037 14.5 0.8 0.037 14.5 0.8 1.7 2 1 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|156936941|ref|YP_001434737.1| - 0.037 12.7 0.0 1.9 7.1 0.0 2.1 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|156936941|ref|YP_001434737.1| - 0.074 12.7 0.2 0.24 11.0 0.1 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 gi|156936941|ref|YP_001434737.1| - 0.11 12.3 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain BCA_ABC_TP_C PF12399.8 gi|156936941|ref|YP_001434737.1| - 0.17 11.9 0.0 0.34 10.9 0.0 1.6 1 0 0 1 1 1 0 Branched-chain amino acid ATP-binding cassette transporter SbcCD_C PF13558.6 gi|156936941|ref|YP_001434737.1| - 0.2 11.9 0.0 0.39 11.0 0.0 1.6 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ABC2_membrane PF01061.24 gi|156936942|ref|YP_001434738.1| - 1.8e-31 109.2 24.1 2.1e-31 109.0 24.1 1.1 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|156936942|ref|YP_001434738.1| - 4.2e-14 52.4 18.8 4.2e-14 52.4 18.8 1.5 1 1 0 1 1 1 1 ABC-2 family transporter protein PHO4 PF01384.20 gi|156936942|ref|YP_001434738.1| - 0.29 10.1 9.7 0.34 9.9 9.7 1.1 1 0 0 1 1 1 0 Phosphate transporter family PLDc_2 PF13091.6 gi|156936944|ref|YP_001434740.1| - 0.0042 17.0 0.0 0.0067 16.3 0.0 1.4 1 0 0 1 1 1 1 PLD-like domain Regulator_TrmB PF11495.8 gi|156936944|ref|YP_001434740.1| - 0.0057 15.9 0.3 0.16 11.1 0.2 2.1 2 0 0 2 2 2 2 Archaeal transcriptional regulator TrmB tRNA-synt_1 PF00133.22 gi|156936945|ref|YP_001434741.1| - 3.7e-52 177.4 1.1 7.3e-40 136.8 0.5 3.6 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|156936945|ref|YP_001434741.1| - 8.8e-27 93.8 0.0 3.6e-12 45.7 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|156936945|ref|YP_001434741.1| - 9.7e-22 77.6 2.3 2.7e-21 76.1 2.3 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|156936945|ref|YP_001434741.1| - 2.8e-13 49.9 0.0 2.2e-09 37.1 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|156936945|ref|YP_001434741.1| - 3.4e-08 33.2 0.0 8.4e-08 31.9 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1f PF01921.18 gi|156936945|ref|YP_001434741.1| - 0.023 13.6 0.0 0.064 12.2 0.0 1.7 1 0 0 1 1 1 0 tRNA synthetases class I (K) Gp-FAR-1 PF05823.12 gi|156936945|ref|YP_001434741.1| - 0.11 12.9 2.2 0.51 10.7 2.2 2.3 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) RNA_pol_Rpb6 PF01192.22 gi|156936946|ref|YP_001434742.1| - 9.6e-10 38.2 0.0 1.2e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb6 Peptidase_S24 PF00717.23 gi|156936948|ref|YP_001434744.1| - 3.7e-09 36.4 0.2 6.2e-09 35.7 0.2 1.4 1 0 0 1 1 1 1 Peptidase S24-like DUF3289 PF11692.8 gi|156936949|ref|YP_001434745.1| - 0.032 13.9 0.1 0.044 13.4 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3289) SNO PF01174.19 gi|156936950|ref|YP_001434746.1| - 1.4e-46 158.7 0.0 1.6e-46 158.6 0.0 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|156936950|ref|YP_001434746.1| - 1e-10 41.6 0.0 2.3e-10 40.4 0.0 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain Peptidase_S51 PF03575.17 gi|156936950|ref|YP_001434746.1| - 2e-08 34.2 0.0 2.6e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 GATase PF00117.28 gi|156936950|ref|YP_001434746.1| - 1.6e-07 31.3 0.1 3.4e-06 26.9 0.1 2.0 1 1 0 1 1 1 1 Glutamine amidotransferase class-I DJ-1_PfpI PF01965.24 gi|156936950|ref|YP_001434746.1| - 0.14 12.0 0.1 0.34 10.7 0.1 1.6 1 1 1 2 2 2 0 DJ-1/PfpI family SOR_SNZ PF01680.17 gi|156936951|ref|YP_001434747.1| - 4.3e-101 337.0 7.0 5.5e-101 336.6 7.0 1.1 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|156936951|ref|YP_001434747.1| - 1.3e-07 31.2 1.7 5.7e-06 25.8 0.1 2.3 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG NanE PF04131.14 gi|156936951|ref|YP_001434747.1| - 0.00019 20.7 0.2 0.076 12.2 0.0 2.4 2 0 0 2 2 2 2 Putative N-acetylmannosamine-6-phosphate epimerase His_biosynth PF00977.21 gi|156936951|ref|YP_001434747.1| - 0.00048 19.6 0.8 0.5 9.8 0.0 3.3 2 2 1 3 3 3 2 Histidine biosynthesis protein Dus PF01207.17 gi|156936951|ref|YP_001434747.1| - 0.00065 18.9 0.3 0.22 10.6 0.0 2.3 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) IGPS PF00218.21 gi|156936951|ref|YP_001434747.1| - 0.001 18.3 0.0 0.066 12.4 0.0 2.3 2 0 0 2 2 2 1 Indole-3-glycerol phosphate synthase NMO PF03060.15 gi|156936951|ref|YP_001434747.1| - 0.0017 17.8 4.1 0.004 16.6 0.1 2.2 2 0 0 2 2 2 1 Nitronate monooxygenase Trp_syntA PF00290.20 gi|156936951|ref|YP_001434747.1| - 0.0067 15.3 0.0 0.011 14.6 0.0 1.3 1 0 0 1 1 1 1 Tryptophan synthase alpha chain OMPdecase PF00215.24 gi|156936951|ref|YP_001434747.1| - 0.0096 15.5 1.1 0.53 9.8 0.0 2.6 2 1 1 3 3 3 1 Orotidine 5'-phosphate decarboxylase / HUMPS family IMPDH PF00478.25 gi|156936951|ref|YP_001434747.1| - 0.014 14.4 0.2 0.021 13.9 0.2 1.3 1 1 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain TetR_C_27 PF17935.1 gi|156936951|ref|YP_001434747.1| - 0.019 15.0 0.0 0.13 12.3 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain LSM PF01423.22 gi|156936952|ref|YP_001434748.1| - 3.6e-17 61.8 0.0 4.4e-17 61.5 0.0 1.1 1 0 0 1 1 1 1 LSM domain AdoMet_Synthase PF01941.19 gi|156936953|ref|YP_001434749.1| - 4.3e-167 555.9 1.4 4.8e-167 555.7 1.4 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) DUF131 PF01998.17 gi|156936954|ref|YP_001434750.1| - 2.3e-05 23.9 4.2 2.3e-05 23.9 4.2 2.2 2 0 0 2 2 2 1 Protein of unknown function DUF131 TPPK_C PF12555.8 gi|156936954|ref|YP_001434750.1| - 0.055 13.5 2.2 0.055 13.5 2.2 1.7 2 0 0 2 2 2 0 Thiamine pyrophosphokinase C terminal DUF2207 PF09972.9 gi|156936954|ref|YP_001434750.1| - 0.21 10.3 8.6 0.29 9.8 8.6 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) CRPA PF05745.11 gi|156936954|ref|YP_001434750.1| - 3.1 7.8 8.5 1.1 9.3 6.0 1.5 1 1 0 1 1 1 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) DUF4381 PF14316.6 gi|156936954|ref|YP_001434750.1| - 3.3 7.9 6.5 18 5.5 2.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) Baculo_11_kDa PF06143.11 gi|156936954|ref|YP_001434750.1| - 6.2 6.5 9.3 3.1 7.4 0.6 2.1 2 0 0 2 2 2 0 Baculovirus 11 kDa family MTS PF05175.14 gi|156936955|ref|YP_001434751.1| - 2e-40 138.1 0.0 2.3e-40 137.9 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|156936955|ref|YP_001434751.1| - 7.2e-15 55.1 0.0 8.8e-15 54.8 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|156936955|ref|YP_001434751.1| - 3.5e-14 52.9 0.0 4.6e-14 52.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|156936955|ref|YP_001434751.1| - 6.6e-12 46.0 0.0 9.4e-12 45.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|156936955|ref|YP_001434751.1| - 1.3e-09 38.6 0.0 1.7e-09 38.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|156936955|ref|YP_001434751.1| - 3.6e-06 27.0 0.0 4.8e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|156936955|ref|YP_001434751.1| - 1e-05 25.4 0.1 1.5e-05 24.8 0.1 1.2 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_23 PF13489.6 gi|156936955|ref|YP_001434751.1| - 1.9e-05 24.6 0.0 2.1e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156936955|ref|YP_001434751.1| - 1.9e-05 25.2 0.0 2.8e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|156936955|ref|YP_001434751.1| - 7.3e-05 22.6 0.1 8.6e-05 22.4 0.1 1.1 1 0 0 1 1 1 1 Met-10+ like-protein PCMT PF01135.19 gi|156936955|ref|YP_001434751.1| - 7.6e-05 22.6 0.0 0.0007 19.4 0.0 1.9 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_2 PF00891.18 gi|156936955|ref|YP_001434751.1| - 0.00019 20.8 0.0 0.00036 19.9 0.0 1.4 2 0 0 2 2 2 1 O-methyltransferase domain Methyltransf_4 PF02390.17 gi|156936955|ref|YP_001434751.1| - 0.0011 18.4 0.0 0.002 17.6 0.0 1.4 2 0 0 2 2 2 1 Putative methyltransferase Methyltransf_32 PF13679.6 gi|156936955|ref|YP_001434751.1| - 0.0016 18.4 0.0 0.0022 18.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 gi|156936955|ref|YP_001434751.1| - 0.0022 17.7 0.0 0.0029 17.3 0.0 1.4 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 TehB PF03848.14 gi|156936955|ref|YP_001434751.1| - 0.0089 15.5 0.0 0.011 15.2 0.0 1.1 1 0 0 1 1 1 1 Tellurite resistance protein TehB GidB PF02527.15 gi|156936955|ref|YP_001434751.1| - 0.01 15.2 0.0 0.015 14.6 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G TRM PF02005.16 gi|156936955|ref|YP_001434751.1| - 0.017 14.3 0.0 0.021 14.0 0.0 1.1 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase Ubie_methyltran PF01209.18 gi|156936955|ref|YP_001434751.1| - 0.019 14.3 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_15 PF09445.10 gi|156936955|ref|YP_001434751.1| - 0.022 14.4 0.0 0.031 13.9 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase MetW PF07021.12 gi|156936955|ref|YP_001434751.1| - 0.084 12.5 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW PulG PF11773.8 gi|156936955|ref|YP_001434751.1| - 0.21 11.4 0.1 0.35 10.7 0.1 1.3 1 0 0 1 1 1 0 Type II secretory pathway pseudopilin N6_Mtase PF02384.16 gi|156936955|ref|YP_001434751.1| - 0.22 10.7 0.0 0.28 10.4 0.0 1.1 1 0 0 1 1 1 0 N-6 DNA Methylase ABC_tran PF00005.27 gi|156936956|ref|YP_001434752.1| - 1.2e-25 90.6 0.0 1.5e-25 90.3 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156936956|ref|YP_001434752.1| - 1.9e-08 34.5 0.3 0.00089 19.1 0.0 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SbcCD_C PF13558.6 gi|156936956|ref|YP_001434752.1| - 0.012 15.8 0.0 0.023 14.9 0.0 1.7 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_30 PF13604.6 gi|156936956|ref|YP_001434752.1| - 0.015 15.0 0.1 0.035 13.8 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|156936956|ref|YP_001434752.1| - 0.019 15.5 0.1 0.045 14.3 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|156936956|ref|YP_001434752.1| - 0.028 14.6 0.0 0.18 12.0 0.0 2.0 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|156936956|ref|YP_001434752.1| - 0.095 12.5 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|156936956|ref|YP_001434752.1| - 0.099 12.1 0.0 0.7 9.3 0.0 1.9 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 gi|156936956|ref|YP_001434752.1| - 0.16 11.1 0.1 5.2 6.2 0.0 2.1 2 0 0 2 2 2 0 NB-ARC domain MoeA_N PF03453.17 gi|156936957|ref|YP_001434753.1| - 8.9e-39 132.8 1.2 2.7e-38 131.2 0.2 2.1 2 0 0 2 2 2 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|156936957|ref|YP_001434753.1| - 5.1e-28 97.5 0.0 1e-27 96.6 0.0 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|156936957|ref|YP_001434753.1| - 1.6e-09 37.8 0.0 1.6e-09 37.8 0.0 3.1 4 0 0 4 4 4 1 MoeA C-terminal region (domain IV) PBP_like PF12727.7 gi|156936957|ref|YP_001434753.1| - 3e-05 23.2 0.0 6e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 PBP superfamily domain LysR_substrate PF03466.20 gi|156936957|ref|YP_001434753.1| - 0.021 14.2 0.0 0.061 12.7 0.0 1.7 2 0 0 2 2 2 0 LysR substrate binding domain Phosphonate-bd PF12974.7 gi|156936957|ref|YP_001434753.1| - 0.031 13.9 0.0 0.075 12.6 0.0 1.6 2 0 0 2 2 2 0 ABC transporter, phosphonate, periplasmic substrate-binding protein ABC_tran PF00005.27 gi|156936958|ref|YP_001434754.1| - 2.8e-32 112.1 0.0 3.9e-32 111.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156936958|ref|YP_001434754.1| - 4.4e-08 33.3 0.0 0.0037 17.1 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156936958|ref|YP_001434754.1| - 3.3e-07 30.0 0.1 4.7e-05 22.9 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain NTPase_1 PF03266.15 gi|156936958|ref|YP_001434754.1| - 4.6e-05 23.4 0.0 0.23 11.3 0.0 2.1 2 0 0 2 2 2 2 NTPase AAA_16 PF13191.6 gi|156936958|ref|YP_001434754.1| - 5e-05 23.8 0.2 0.0001 22.7 0.2 1.6 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|156936958|ref|YP_001434754.1| - 0.00021 21.0 0.2 0.00037 20.2 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_25 PF13481.6 gi|156936958|ref|YP_001434754.1| - 0.00022 20.9 0.9 0.011 15.3 0.2 2.3 2 1 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|156936958|ref|YP_001434754.1| - 0.00049 20.3 0.5 0.0024 18.1 0.5 1.9 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|156936958|ref|YP_001434754.1| - 0.0011 19.5 0.0 0.051 14.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|156936958|ref|YP_001434754.1| - 0.0032 17.7 0.0 0.021 15.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|156936958|ref|YP_001434754.1| - 0.0043 16.8 0.6 0.022 14.5 0.6 2.0 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|156936958|ref|YP_001434754.1| - 0.0045 16.9 0.1 0.0096 15.8 0.1 1.5 1 0 0 1 1 1 1 RsgA GTPase AAA_22 PF13401.6 gi|156936958|ref|YP_001434754.1| - 0.0065 16.7 0.3 0.014 15.7 0.3 1.8 1 1 0 1 1 1 1 AAA domain DLIC PF05783.11 gi|156936958|ref|YP_001434754.1| - 0.025 13.4 0.1 0.036 12.9 0.1 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) SbcCD_C PF13558.6 gi|156936958|ref|YP_001434754.1| - 0.029 14.6 0.1 0.47 10.7 0.1 2.3 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 gi|156936958|ref|YP_001434754.1| - 0.037 13.7 0.0 2 8.0 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain CheB_methylest PF01339.17 gi|156936958|ref|YP_001434754.1| - 0.066 12.9 0.0 1.1 9.0 0.0 2.0 2 0 0 2 2 2 0 CheB methylesterase IstB_IS21 PF01695.17 gi|156936958|ref|YP_001434754.1| - 0.071 12.8 0.1 2.4 7.8 0.1 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA12 PF10443.9 gi|156936958|ref|YP_001434754.1| - 0.095 11.4 0.1 0.14 10.8 0.1 1.2 1 0 0 1 1 1 0 RNA12 protein NACHT PF05729.12 gi|156936958|ref|YP_001434754.1| - 0.11 12.4 0.1 0.21 11.5 0.1 1.5 1 0 0 1 1 1 0 NACHT domain AviRa PF11599.8 gi|156936958|ref|YP_001434754.1| - 0.12 11.8 0.1 0.28 10.6 0.1 1.7 1 1 0 1 1 1 0 RRNA methyltransferase AviRa NHase_beta PF02211.15 gi|156936958|ref|YP_001434754.1| - 0.13 12.3 0.1 0.18 11.8 0.1 1.2 1 0 0 1 1 1 0 Nitrile hydratase beta subunit AAA_23 PF13476.6 gi|156936958|ref|YP_001434754.1| - 0.15 12.5 0.0 0.25 11.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|156936958|ref|YP_001434754.1| - 0.16 11.3 0.1 3.1 7.1 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI PseudoU_synth_2 PF00849.22 gi|156936958|ref|YP_001434754.1| - 0.17 12.0 0.0 0.2 11.7 0.0 1.3 1 1 0 1 1 1 0 RNA pseudouridylate synthase RNA_helicase PF00910.22 gi|156936958|ref|YP_001434754.1| - 0.17 12.3 0.0 0.43 11.0 0.0 1.7 2 0 0 2 2 1 0 RNA helicase Fibrillin_U_N PF18193.1 gi|156936959|ref|YP_001434755.1| - 0.49 10.6 2.4 4.2 7.6 0.0 2.8 3 0 0 3 3 3 0 Fibrillin 1 unique N-terminal domain GARS_A PF01071.19 gi|156936960|ref|YP_001434756.1| - 8e-43 146.5 0.5 1.4e-42 145.7 0.5 1.4 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|156936960|ref|YP_001434756.1| - 6.3e-20 71.8 0.1 1.5e-19 70.6 0.1 1.7 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|156936960|ref|YP_001434756.1| - 9.3e-11 41.9 0.1 3.8e-10 39.9 0.0 2.1 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.6 gi|156936960|ref|YP_001434756.1| - 1.9e-06 27.6 0.8 4.7e-06 26.3 0.2 1.9 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|156936960|ref|YP_001434756.1| - 2e-05 24.0 0.3 0.003 16.9 0.0 2.3 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|156936960|ref|YP_001434756.1| - 0.00011 22.3 0.1 0.00034 20.7 0.1 1.9 1 1 0 1 1 1 1 ATP-grasp domain ATPgrasp_TupA PF14305.6 gi|156936960|ref|YP_001434756.1| - 0.00071 19.4 0.7 0.0012 18.6 0.7 1.3 1 0 0 1 1 1 1 TupA-like ATPgrasp ATPgrasp_YheCD PF14398.6 gi|156936960|ref|YP_001434756.1| - 0.0099 15.1 0.1 0.016 14.4 0.1 1.2 1 0 0 1 1 1 1 YheC/D like ATP-grasp CPSase_L_D2 PF02786.17 gi|156936960|ref|YP_001434756.1| - 0.017 14.6 0.1 0.038 13.5 0.1 1.6 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain LAL_C2 PF18603.1 gi|156936960|ref|YP_001434756.1| - 0.17 12.1 1.6 0.34 11.1 0.2 2.3 2 0 0 2 2 2 0 L-amino acid ligase C-terminal domain 2 MMR_HSR1 PF01926.23 gi|156936962|ref|YP_001434758.1| - 5.1e-13 49.1 0.0 4.5e-10 39.6 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|156936962|ref|YP_001434758.1| - 9.4e-12 45.2 0.0 1.5e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 gi|156936962|ref|YP_001434758.1| - 7.8e-07 28.7 0.1 0.019 14.5 0.0 2.1 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|156936962|ref|YP_001434758.1| - 1.1e-05 25.1 0.0 0.00054 19.5 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 gi|156936962|ref|YP_001434758.1| - 0.00086 19.4 2.7 0.0043 17.1 0.1 2.7 3 0 0 3 3 3 1 Dynamin family AAA_16 PF13191.6 gi|156936962|ref|YP_001434758.1| - 0.0061 17.0 0.1 0.018 15.4 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain IIGP PF05049.13 gi|156936962|ref|YP_001434758.1| - 0.012 14.8 0.0 0.015 14.4 0.0 1.1 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) GBP PF02263.19 gi|156936962|ref|YP_001434758.1| - 0.068 12.4 0.0 0.095 11.9 0.0 1.1 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain cobW PF02492.19 gi|156936962|ref|YP_001434758.1| - 0.072 12.7 0.1 2.5 7.7 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 gi|156936962|ref|YP_001434758.1| - 0.087 13.4 0.1 0.24 12.0 0.1 1.7 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|156936962|ref|YP_001434758.1| - 0.11 11.7 0.0 0.23 10.7 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin MeaB PF03308.16 gi|156936962|ref|YP_001434758.1| - 0.14 11.1 0.1 0.3 10.0 0.0 1.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RimK PF08443.11 gi|156936963|ref|YP_001434759.1| - 3.1e-23 82.4 0.0 3.8e-23 82.1 0.0 1.1 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|156936963|ref|YP_001434759.1| - 9.2e-10 38.8 0.1 2.4e-09 37.5 0.1 1.6 1 1 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.16 gi|156936963|ref|YP_001434759.1| - 4.5e-08 32.7 0.0 6.6e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_ST PF14397.6 gi|156936963|ref|YP_001434759.1| - 5e-05 22.7 0.0 0.022 14.0 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp R2K_3 PF14243.6 gi|156936963|ref|YP_001434759.1| - 0.0066 16.5 0.0 0.0091 16.0 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 ATPgrasp_YheCD PF14398.6 gi|156936963|ref|YP_001434759.1| - 0.017 14.4 0.0 0.034 13.4 0.0 1.4 1 0 0 1 1 1 0 YheC/D like ATP-grasp Dala_Dala_lig_C PF07478.13 gi|156936963|ref|YP_001434759.1| - 0.021 14.4 0.0 3.8 7.0 0.0 2.6 2 1 0 2 2 2 0 D-ala D-ala ligase C-terminus Nitro_FeMo-Co PF02579.17 gi|156936964|ref|YP_001434760.1| - 1.9e-09 37.7 0.1 2.5e-09 37.4 0.1 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor RRP7 PF12923.7 gi|156936964|ref|YP_001434760.1| - 0.026 14.6 0.1 0.039 14.1 0.1 1.3 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain SIS PF01380.22 gi|156936966|ref|YP_001434762.1| - 1.3e-41 141.5 0.0 7.4e-23 80.8 0.1 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|156936966|ref|YP_001434762.1| - 1.2e-24 87.0 0.0 3.5e-24 85.5 0.0 1.7 2 0 0 2 2 2 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|156936966|ref|YP_001434762.1| - 1.3e-18 67.1 0.0 3e-18 65.9 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain bact-PGI_C PF10432.9 gi|156936966|ref|YP_001434762.1| - 3.3e-06 27.2 0.0 1.5e-05 25.1 0.0 2.1 2 0 0 2 2 2 1 Bacterial phospho-glucose isomerase C-terminal SIS domain GATase_4 PF13230.6 gi|156936966|ref|YP_001434762.1| - 9.6e-06 24.7 0.0 1.7e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_2 PF00310.21 gi|156936966|ref|YP_001434762.1| - 0.0058 15.4 0.0 0.021 13.5 0.0 1.8 1 1 1 2 2 2 1 Glutamine amidotransferases class-II SIS_2 PF13580.6 gi|156936966|ref|YP_001434762.1| - 0.0063 16.5 0.5 0.22 11.6 0.2 2.4 2 0 0 2 2 2 1 SIS domain TraC PF07820.12 gi|156936966|ref|YP_001434762.1| - 0.062 13.6 0.1 0.14 12.5 0.1 1.6 1 0 0 1 1 1 0 TraC-like protein IMS PF00817.20 gi|156936966|ref|YP_001434762.1| - 0.069 13.1 0.3 1 9.3 0.0 2.4 2 1 0 2 2 2 0 impB/mucB/samB family Fer4 PF00037.27 gi|156936967|ref|YP_001434763.1| - 1.9e-09 36.9 15.2 5.7e-05 22.8 3.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156936967|ref|YP_001434763.1| - 4.8e-08 33.5 4.3 0.00071 20.1 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156936967|ref|YP_001434763.1| - 5e-08 33.0 4.0 0.00079 19.5 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156936967|ref|YP_001434763.1| - 6.3e-08 33.4 8.0 0.0011 19.8 0.6 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|156936967|ref|YP_001434763.1| - 7.7e-06 25.8 12.7 0.0004 20.3 2.2 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156936967|ref|YP_001434763.1| - 3.7e-05 23.8 7.9 7e-05 22.9 7.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156936967|ref|YP_001434763.1| - 4.4e-05 23.3 12.0 0.0088 16.1 2.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156936967|ref|YP_001434763.1| - 0.0012 18.9 12.6 0.022 14.9 14.0 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156936967|ref|YP_001434763.1| - 0.006 17.4 18.8 0.11 13.5 3.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156936967|ref|YP_001434763.1| - 0.14 12.8 13.1 0.13 12.8 2.3 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|156936967|ref|YP_001434763.1| - 1.6 9.3 13.3 10 6.8 2.9 2.3 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156936967|ref|YP_001434763.1| - 3.3 8.5 12.6 7 7.5 3.3 2.5 1 1 1 2 2 2 0 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|156936967|ref|YP_001434763.1| - 6.3 7.3 13.7 11 6.5 2.6 2.3 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156936968|ref|YP_001434764.1| - 1.6e-10 40.3 8.4 0.00012 21.8 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|156936968|ref|YP_001434764.1| - 4.8e-09 35.9 10.8 0.00021 21.2 0.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|156936968|ref|YP_001434764.1| - 1.9e-08 35.1 4.8 0.0015 19.4 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|156936968|ref|YP_001434764.1| - 3.9e-07 30.1 6.1 7.1e-07 29.3 6.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|156936968|ref|YP_001434764.1| - 3.9e-07 30.1 7.7 9.2e-07 28.9 7.8 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156936968|ref|YP_001434764.1| - 5.3e-07 30.1 10.1 1.3e-06 28.9 10.0 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156936968|ref|YP_001434764.1| - 1.4e-06 28.0 13.3 0.0019 18.2 3.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156936968|ref|YP_001434764.1| - 1.2e-05 25.3 11.5 0.00047 20.2 13.1 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156936968|ref|YP_001434764.1| - 0.00089 19.6 10.7 0.021 15.3 3.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|156936968|ref|YP_001434764.1| - 0.0045 17.5 11.1 0.36 11.4 2.8 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|156936968|ref|YP_001434764.1| - 0.0049 17.4 12.4 0.13 12.8 1.2 2.7 3 0 0 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|156936968|ref|YP_001434764.1| - 0.09 13.2 12.8 8.7 6.9 2.2 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156936968|ref|YP_001434764.1| - 0.14 13.2 16.6 2.3 9.4 4.2 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|156936968|ref|YP_001434764.1| - 0.14 12.4 4.2 0.49 10.6 4.1 1.8 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156936968|ref|YP_001434764.1| - 0.27 12.0 4.6 2 9.2 0.5 2.6 3 0 0 3 3 2 0 4Fe-4S single cluster domain Alba PF01918.21 gi|156936969|ref|YP_001434765.1| - 5.1e-22 77.5 0.2 6.8e-22 77.1 0.2 1.2 1 0 0 1 1 1 1 Alba His_biosynth PF00977.21 gi|156936972|ref|YP_001434768.1| - 1.7e-54 184.7 0.1 1.9e-54 184.6 0.1 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.17 gi|156936972|ref|YP_001434768.1| - 2.9e-05 23.6 1.1 0.0046 16.5 0.0 2.1 2 0 0 2 2 2 2 PcrB family Ribul_P_3_epim PF00834.19 gi|156936972|ref|YP_001434768.1| - 0.0093 15.4 0.0 0.52 9.7 0.0 2.1 2 0 0 2 2 2 2 Ribulose-phosphate 3 epimerase family IMPDH PF00478.25 gi|156936972|ref|YP_001434768.1| - 0.04 12.9 0.0 0.29 10.1 0.0 2.0 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain NanE PF04131.14 gi|156936972|ref|YP_001434768.1| - 0.095 11.9 0.0 1.4 8.1 0.0 2.1 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase RIO1 PF01163.22 gi|156936973|ref|YP_001434769.1| - 2.6e-09 36.9 0.0 4.3e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|156936973|ref|YP_001434769.1| - 4.6e-08 32.8 0.0 8.1e-08 31.9 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain APH PF01636.23 gi|156936973|ref|YP_001434769.1| - 1.1e-06 28.7 0.0 0.0004 20.4 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 gi|156936973|ref|YP_001434769.1| - 4e-06 26.3 0.5 0.00014 21.3 0.5 2.1 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_Tyr PF07714.17 gi|156936973|ref|YP_001434769.1| - 0.002 17.5 0.0 0.008 15.5 0.0 1.9 1 1 0 1 1 1 1 Protein tyrosine kinase WaaY PF06176.11 gi|156936973|ref|YP_001434769.1| - 0.0051 16.5 0.2 0.0065 16.1 0.2 1.3 1 1 0 1 1 1 1 Lipopolysaccharide core biosynthesis protein (WaaY) DUF4135 PF13575.6 gi|156936973|ref|YP_001434769.1| - 0.0061 15.9 0.0 0.0074 15.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4135) Sas10 PF09368.10 gi|156936973|ref|YP_001434769.1| - 2.2 8.8 4.9 0.63 10.6 1.2 1.9 2 0 0 2 2 2 0 Sas10 C-terminal domain Ham1p_like PF01725.16 gi|156936974|ref|YP_001434770.1| - 4.2e-51 173.5 0.0 4.6e-51 173.4 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Ribosomal_S13 PF00416.22 gi|156936975|ref|YP_001434771.1| - 1.8e-40 138.3 0.1 2.1e-40 138.1 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH_5 PF14520.6 gi|156936975|ref|YP_001434771.1| - 0.052 14.2 0.2 0.12 13.0 0.2 1.7 1 1 0 1 1 1 0 Helix-hairpin-helix domain S4 PF01479.25 gi|156936976|ref|YP_001434772.1| - 6.8e-18 64.1 0.2 1.7e-17 62.8 0.2 1.7 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 gi|156936976|ref|YP_001434772.1| - 3.6e-06 27.8 0.7 7.9e-06 26.7 0.3 1.9 1 1 1 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain Glyco_hydro38C2 PF17677.1 gi|156936976|ref|YP_001434772.1| - 0.051 13.7 0.1 0.075 13.2 0.1 1.3 1 0 0 1 1 1 0 Glycosyl hydrolases family 38 C-terminal beta sandwich domain RNA_pol_Rpb1_R PF05001.13 gi|156936976|ref|YP_001434772.1| - 0.22 11.9 1.5 1 9.8 1.5 2.0 1 1 0 1 1 1 0 RNA polymerase Rpb1 C-terminal repeat Ribosomal_S11 PF00411.19 gi|156936977|ref|YP_001434773.1| - 1.6e-46 157.3 2.3 1.9e-46 157.0 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 BKACE PF05853.12 gi|156936977|ref|YP_001434773.1| - 0.024 14.0 1.0 0.03 13.7 1.0 1.1 1 0 0 1 1 1 0 beta-keto acid cleavage enzyme Pilus_CpaD PF09476.10 gi|156936977|ref|YP_001434773.1| - 0.1 12.3 0.3 0.13 12.0 0.3 1.1 1 0 0 1 1 1 0 Pilus biogenesis CpaD protein (pilus_cpaD) RNA_pol_A_bac PF01000.26 gi|156936978|ref|YP_001434774.1| - 4.5e-24 85.0 0.0 1e-22 80.6 0.0 2.3 2 1 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|156936978|ref|YP_001434774.1| - 1.1e-09 37.6 0.0 1.4e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Ribosomal_L27A PF00828.19 gi|156936979|ref|YP_001434775.1| - 3.4e-09 37.4 0.6 1.2e-08 35.6 0.6 1.8 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|156936979|ref|YP_001434775.1| - 4.1e-08 32.8 0.0 4.5e-08 32.7 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L13 PF00572.18 gi|156936980|ref|YP_001434776.1| - 3.5e-13 49.9 1.6 5.2e-08 33.2 0.3 2.4 1 1 1 2 2 2 2 Ribosomal protein L13 Ribosomal_S9 PF00380.19 gi|156936981|ref|YP_001434777.1| - 3.4e-30 105.0 0.3 4e-30 104.8 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 RNA_pol_N PF01194.17 gi|156936982|ref|YP_001434778.1| - 1e-24 86.5 0.2 1.2e-24 86.4 0.2 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Rad50_zn_hook PF04423.14 gi|156936982|ref|YP_001434778.1| - 0.17 11.7 0.7 0.54 10.1 0.2 2.0 2 0 0 2 2 2 0 Rad50 zinc hook motif Ribosomal_S2 PF00318.20 gi|156936983|ref|YP_001434779.1| - 5e-28 97.8 0.6 7e-16 58.1 0.2 2.0 1 1 1 2 2 2 2 Ribosomal protein S2 IalB PF06776.12 gi|156936983|ref|YP_001434779.1| - 0.17 11.9 0.0 9.6 6.2 0.0 2.3 2 0 0 2 2 2 0 Invasion associated locus B (IalB) protein Fer4_13 PF13370.6 gi|156936984|ref|YP_001434780.1| - 5.3e-21 74.9 5.2 6.4e-21 74.7 5.2 1.1 1 0 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|156936984|ref|YP_001434780.1| - 2.4e-16 60.2 3.5 2.7e-16 60.0 3.5 1.0 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_10 PF13237.6 gi|156936984|ref|YP_001434780.1| - 0.0064 16.6 2.8 0.014 15.5 3.0 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156936984|ref|YP_001434780.1| - 0.035 13.9 5.6 0.12 12.2 0.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_19 PF06902.11 gi|156936984|ref|YP_001434780.1| - 0.14 12.3 3.4 0.3 11.2 3.4 1.6 1 1 0 1 1 1 0 Divergent 4Fe-4S mono-cluster Fer4_7 PF12838.7 gi|156936984|ref|YP_001434780.1| - 0.52 10.9 4.7 1.9 9.1 0.6 2.2 1 1 2 3 3 3 0 4Fe-4S dicluster domain Ribosomal_L24e PF01246.20 gi|156936985|ref|YP_001434781.1| - 0.0033 17.6 1.0 0.0055 16.9 1.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L24e Fer4_14 PF13394.6 gi|156936985|ref|YP_001434781.1| - 0.091 12.9 0.0 0.1 12.7 0.0 1.1 1 0 0 1 1 1 0 4Fe-4S single cluster domain DEAD PF00270.29 gi|156936986|ref|YP_001434782.1| - 8.9e-32 110.3 0.0 7.9e-30 103.9 0.0 2.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|156936986|ref|YP_001434782.1| - 3.8e-22 78.7 0.0 3.3e-21 75.7 0.0 2.5 3 0 0 3 3 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|156936986|ref|YP_001434782.1| - 1.4e-09 38.2 0.0 1.1e-08 35.2 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD_assoc PF08494.11 gi|156936986|ref|YP_001434782.1| - 1e-08 35.2 0.0 0.00034 20.5 0.0 2.6 1 1 1 2 2 2 2 DEAD/H associated AAA_22 PF13401.6 gi|156936986|ref|YP_001434782.1| - 7.7e-05 23.0 0.0 0.96 9.7 0.0 3.5 3 0 0 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|156936986|ref|YP_001434782.1| - 0.00093 19.6 0.0 0.013 15.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain SNF2_N PF00176.23 gi|156936986|ref|YP_001434782.1| - 0.0012 17.7 0.0 0.0022 16.8 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain HTH_11 PF08279.12 gi|156936986|ref|YP_001434782.1| - 0.0021 18.0 0.0 0.0081 16.1 0.0 2.0 1 0 0 1 1 1 1 HTH domain HTH_20 PF12840.7 gi|156936986|ref|YP_001434782.1| - 0.0031 17.5 0.1 0.0087 16.1 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain BtrH_N PF14399.6 gi|156936986|ref|YP_001434782.1| - 0.021 15.1 0.1 1.1 9.6 0.0 2.5 2 0 0 2 2 2 0 Butirosin biosynthesis protein H, N-terminal Sigma70_r4_2 PF08281.12 gi|156936986|ref|YP_001434782.1| - 0.023 14.4 0.1 0.11 12.3 0.1 2.2 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Crp_2 PF13545.6 gi|156936986|ref|YP_001434782.1| - 0.062 13.3 0.1 0.24 11.4 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain UvrD-helicase PF00580.21 gi|156936986|ref|YP_001434782.1| - 0.068 12.7 0.4 0.41 10.1 0.0 2.4 3 0 0 3 3 3 0 UvrD/REP helicase N-terminal domain Citrate_synt PF00285.21 gi|156936986|ref|YP_001434782.1| - 0.11 11.6 0.0 0.25 10.4 0.0 1.6 1 0 0 1 1 1 0 Citrate synthase, C-terminal domain Sigma70_ECF PF07638.11 gi|156936986|ref|YP_001434782.1| - 0.15 11.9 0.0 0.45 10.4 0.0 1.8 1 0 0 1 1 1 0 ECF sigma factor Gp58 PF07902.11 gi|156936986|ref|YP_001434782.1| - 0.16 10.3 0.0 0.28 9.4 0.0 1.3 1 0 0 1 1 1 0 gp58-like protein Adeno_IVa2 PF02456.15 gi|156936986|ref|YP_001434782.1| - 0.16 10.7 0.0 0.31 9.8 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein ECH_2 PF16113.5 gi|156936986|ref|YP_001434782.1| - 0.28 10.6 0.6 14 5.0 0.1 2.3 2 0 0 2 2 2 0 Enoyl-CoA hydratase/isomerase DUF520 PF04461.13 gi|156936986|ref|YP_001434782.1| - 0.35 11.0 5.6 0.46 10.6 0.8 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF520) TrkH PF02386.16 gi|156936987|ref|YP_001434783.1| - 1.5e-26 92.9 20.9 3.3e-23 81.9 8.7 2.4 1 1 1 2 2 2 2 Cation transport protein Ribosomal_S25 PF03297.15 gi|156936988|ref|YP_001434784.1| - 2.2e-15 56.7 1.6 2.8e-15 56.3 1.6 1.2 1 0 0 1 1 1 1 S25 ribosomal protein EAP30 PF04157.16 gi|156936988|ref|YP_001434784.1| - 0.00014 21.3 0.2 0.0002 20.7 0.2 1.3 1 1 0 1 1 1 1 EAP30/Vps36 family HTH_24 PF13412.6 gi|156936988|ref|YP_001434784.1| - 0.0012 18.4 0.9 0.0023 17.4 0.0 2.0 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_41 PF14502.6 gi|156936988|ref|YP_001434784.1| - 0.021 14.5 0.3 0.052 13.2 0.1 1.9 2 1 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 gi|156936988|ref|YP_001434784.1| - 0.031 14.2 0.0 0.058 13.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_28 PF13518.6 gi|156936988|ref|YP_001434784.1| - 0.056 13.6 0.5 0.47 10.6 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain SWC7 PF17330.2 gi|156936988|ref|YP_001434784.1| - 0.057 13.5 0.5 0.38 10.9 0.2 2.1 2 1 0 2 2 2 0 SWR1 chromatin-remodelling complex, sub-unit Swc7 HTH_11 PF08279.12 gi|156936988|ref|YP_001434784.1| - 0.062 13.3 0.6 0.16 12.0 0.1 1.9 2 0 0 2 2 2 0 HTH domain HTH_Crp_2 PF13545.6 gi|156936988|ref|YP_001434784.1| - 0.065 13.2 1.0 0.32 11.0 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain Glyco_hydro_18 PF00704.28 gi|156936988|ref|YP_001434784.1| - 0.1 12.3 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 18 PAC2 PF09754.9 gi|156936989|ref|YP_001434785.1| - 2e-40 139.1 0.0 2.4e-40 138.8 0.0 1.1 1 0 0 1 1 1 1 PAC2 family SKA2 PF16740.5 gi|156936989|ref|YP_001434785.1| - 0.015 15.1 0.6 0.037 13.8 0.6 1.6 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 HSP20 PF00011.21 gi|156936990|ref|YP_001434786.1| - 0.0043 17.2 0.1 0.005 17.0 0.1 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family Staphopain_pro PF14731.6 gi|156936990|ref|YP_001434786.1| - 0.011 15.7 0.1 0.015 15.3 0.1 1.3 1 1 0 1 1 1 0 Staphopain proregion ArsA_HSP20 PF17886.1 gi|156936990|ref|YP_001434786.1| - 0.023 14.2 0.1 0.036 13.6 0.1 1.4 1 1 0 1 1 1 0 HSP20-like domain found in ArsA tRNA-synt_2c PF01411.19 gi|156936991|ref|YP_001434787.1| - 1.5e-120 403.4 0.0 2.8e-120 402.4 0.0 1.5 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|156936991|ref|YP_001434787.1| - 3.7e-13 49.3 0.4 8.5e-13 48.2 0.4 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain DHHA1 PF02272.19 gi|156936991|ref|YP_001434787.1| - 3.8e-08 33.8 2.2 1.3e-07 32.1 2.2 2.0 1 0 0 1 1 1 1 DHHA1 domain Tropomyosin_1 PF12718.7 gi|156936991|ref|YP_001434787.1| - 0.025 14.8 2.5 0.06 13.5 1.5 2.1 2 0 0 2 2 2 0 Tropomyosin like tRNA-synt_2e PF02091.15 gi|156936991|ref|YP_001434787.1| - 0.056 12.7 0.1 0.11 11.7 0.1 1.4 1 0 0 1 1 1 0 Glycyl-tRNA synthetase alpha subunit Apolipoprotein PF01442.18 gi|156936991|ref|YP_001434787.1| - 0.13 12.1 5.1 0.071 13.0 2.7 1.7 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain Prefoldin_2 PF01920.20 gi|156936991|ref|YP_001434787.1| - 0.18 11.8 2.0 0.73 9.8 2.0 2.0 1 0 0 1 1 1 0 Prefoldin subunit GTP-bdg_M PF16360.5 gi|156936991|ref|YP_001434787.1| - 0.19 12.4 0.6 0.5 11.0 0.6 1.7 1 0 0 1 1 1 0 GTP-binding GTPase Middle Region zf-RRN7 PF11781.8 gi|156936991|ref|YP_001434787.1| - 0.39 10.4 2.2 0.25 11.1 0.1 1.8 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Laminin_II PF06009.12 gi|156936991|ref|YP_001434787.1| - 1.1 9.3 3.7 14 5.6 0.8 2.8 3 0 0 3 3 3 0 Laminin Domain II Talin_middle PF09141.10 gi|156936992|ref|YP_001434788.1| - 0.13 12.3 0.1 0.3 11.1 0.1 1.6 1 0 0 1 1 1 0 Talin, middle domain Radical_SAM PF04055.21 gi|156936993|ref|YP_001434789.1| - 3e-19 70.0 0.4 7e-19 68.8 0.1 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|156936993|ref|YP_001434789.1| - 0.019 15.1 0.1 0.064 13.4 0.0 1.9 2 1 0 2 2 2 0 4Fe-4S single cluster domain AA_kinase PF00696.28 gi|156936994|ref|YP_001434790.1| - 1.1e-48 165.9 0.0 1.1e-47 162.6 0.0 2.1 2 0 0 2 2 2 1 Amino acid kinase family TMF_TATA_bd PF12325.8 gi|156936994|ref|YP_001434790.1| - 0.0048 17.1 0.1 0.0088 16.2 0.1 1.4 1 0 0 1 1 1 1 TATA element modulatory factor 1 TATA binding Asparaginase PF00710.20 gi|156936996|ref|YP_001434792.1| - 1.2e-61 207.6 0.1 1.9e-61 207.0 0.1 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|156936996|ref|YP_001434792.1| - 3.6e-28 98.1 0.2 3.2e-27 95.0 0.0 2.2 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|156936996|ref|YP_001434792.1| - 1.9e-18 65.5 3.2 3.8e-18 64.5 3.2 1.5 1 0 0 1 1 1 1 GatD N-terminal domain DNA_binding_1 PF01035.20 gi|156936998|ref|YP_001434794.1| - 4e-23 81.3 0.0 4.8e-23 81.1 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain AAA_3 PF07726.11 gi|156937000|ref|YP_001434796.1| - 1.8e-58 196.0 0.1 3.4e-58 195.2 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|156937000|ref|YP_001434796.1| - 4.5e-16 59.1 0.0 1.1e-15 57.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_lid_2 PF17863.1 gi|156937000|ref|YP_001434796.1| - 2.3e-14 53.0 6.4 2.3e-14 53.0 6.4 2.3 3 0 0 3 3 3 1 AAA lid domain AAA PF00004.29 gi|156937000|ref|YP_001434796.1| - 6.2e-06 26.7 0.1 2.5e-05 24.7 0.0 2.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|156937000|ref|YP_001434796.1| - 7.3e-06 25.8 0.0 2e-05 24.4 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain RuvB_N PF05496.12 gi|156937000|ref|YP_001434796.1| - 1.9e-05 24.4 0.3 0.00057 19.7 0.0 2.7 2 1 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 gi|156937000|ref|YP_001434796.1| - 3.6e-05 23.0 0.0 6.2e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 MCM P-loop domain Mg_chelatase PF01078.21 gi|156937000|ref|YP_001434796.1| - 9.4e-05 21.9 0.2 0.011 15.1 0.0 2.2 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI TsaE PF02367.17 gi|156937000|ref|YP_001434796.1| - 0.12 12.4 0.1 0.22 11.5 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_6 PF12774.7 gi|156937000|ref|YP_001434796.1| - 0.18 10.8 0.0 0.33 9.9 0.0 1.4 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region Transglut_core PF01841.19 gi|156937001|ref|YP_001434797.1| - 4.6e-19 68.9 0.2 8.7e-19 68.0 0.2 1.5 1 0 0 1 1 1 1 Transglutaminase-like superfamily DUF350 PF03994.14 gi|156937001|ref|YP_001434797.1| - 0.0051 16.9 0.9 0.015 15.4 0.4 2.1 2 0 0 2 2 2 1 Domain of Unknown Function (DUF350) Transglut_core3 PF13471.6 gi|156937001|ref|YP_001434797.1| - 0.04 13.8 1.0 0.25 11.3 0.0 2.4 2 0 0 2 2 2 0 Transglutaminase-like superfamily DUF364 PF04016.12 gi|156937002|ref|YP_001434798.1| - 1.1e-29 102.9 0.0 1.5e-29 102.5 0.0 1.2 1 0 0 1 1 1 1 Putative heavy-metal chelation RE_BstXI PF09552.10 gi|156937002|ref|YP_001434798.1| - 0.052 12.7 0.0 0.074 12.2 0.0 1.2 1 0 0 1 1 1 0 BstXI restriction endonuclease RNase_PH PF01138.21 gi|156937004|ref|YP_001434800.1| - 2e-30 106.0 0.0 2.9e-30 105.5 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|156937004|ref|YP_001434800.1| - 3.5e-07 30.2 0.0 8e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DUF2283 PF10049.9 gi|156937004|ref|YP_001434800.1| - 0.14 12.4 0.0 0.38 11.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2283) RNase_PH PF01138.21 gi|156937005|ref|YP_001434801.1| - 8.9e-35 120.1 0.0 1.1e-34 119.8 0.0 1.1 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|156937005|ref|YP_001434801.1| - 9.2e-11 41.6 0.0 1.5e-10 41.0 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 KH_6 PF15985.5 gi|156937006|ref|YP_001434802.1| - 9e-11 42.0 0.2 1.5e-10 41.2 0.2 1.4 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|156937006|ref|YP_001434802.1| - 8.1e-05 22.4 1.2 0.00018 21.2 1.2 1.6 1 0 0 1 1 1 1 KH domain S1 PF00575.23 gi|156937006|ref|YP_001434802.1| - 0.0013 19.0 0.4 0.07 13.5 0.0 3.0 3 0 0 3 3 3 1 S1 RNA binding domain KH_2 PF07650.17 gi|156937006|ref|YP_001434802.1| - 0.0076 16.1 2.2 0.015 15.1 2.2 1.6 1 0 0 1 1 1 1 KH domain Molybdopterin_N PF18364.1 gi|156937006|ref|YP_001434802.1| - 0.22 11.6 0.6 17 5.5 0.1 2.8 3 0 0 3 3 3 0 Molybdopterin oxidoreductase N-terminal domain DNA_RNApol_7kD PF03604.13 gi|156937007|ref|YP_001434803.1| - 0.0073 16.0 1.7 0.024 14.3 1.7 1.8 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Mu-like_Com PF10122.9 gi|156937007|ref|YP_001434803.1| - 0.0094 15.4 4.7 0.016 14.7 1.7 2.2 1 1 1 2 2 2 1 Mu-like prophage protein Com Zn-ribbon_8 PF09723.10 gi|156937007|ref|YP_001434803.1| - 0.071 13.2 1.2 0.54 10.4 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-Mss51 PF13824.6 gi|156937007|ref|YP_001434803.1| - 0.079 13.1 1.9 0.86 9.7 0.1 2.3 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Vps36-NZF-N PF16988.5 gi|156937007|ref|YP_001434803.1| - 0.12 11.8 0.0 0.22 11.0 0.0 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-ribbon_3 PF13248.6 gi|156937007|ref|YP_001434803.1| - 0.13 11.7 1.4 0.4 10.2 0.1 2.0 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|156937007|ref|YP_001434803.1| - 0.26 11.3 2.7 6.9 6.7 0.2 2.3 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|156937007|ref|YP_001434803.1| - 0.62 9.9 5.4 0.97 9.2 0.8 2.2 1 1 1 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|156937007|ref|YP_001434803.1| - 0.69 9.8 5.5 6 6.8 0.9 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DUF2688 PF10892.8 gi|156937007|ref|YP_001434803.1| - 1.2 8.7 5.6 2.1 7.9 0.1 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) B-block_TFIIIC PF04182.12 gi|156937008|ref|YP_001434804.1| - 6.5e-06 26.2 0.3 1.1e-05 25.4 0.3 1.4 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC RNA_pol_Rpc34 PF05158.12 gi|156937008|ref|YP_001434804.1| - 0.00023 20.7 2.6 0.036 13.4 0.1 2.1 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit MarR PF01047.22 gi|156937008|ref|YP_001434804.1| - 0.13 12.2 0.7 0.26 11.2 0.1 1.9 2 1 0 2 2 2 0 MarR family Shikimate_dh_N PF08501.11 gi|156937010|ref|YP_001434806.1| - 9.1e-23 80.3 0.0 2.3e-22 79.0 0.0 1.7 1 0 0 1 1 1 1 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 gi|156937010|ref|YP_001434806.1| - 2.1e-10 40.8 0.1 4.2e-10 39.8 0.1 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase F420_oxidored PF03807.17 gi|156937010|ref|YP_001434806.1| - 5.5e-05 23.7 0.8 0.00012 22.5 0.5 1.7 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|156937010|ref|YP_001434806.1| - 0.005 17.7 0.1 0.0082 17.0 0.1 1.3 1 0 0 1 1 1 1 Oxidoreductase family, NAD-binding Rossmann fold PDH PF02153.17 gi|156937010|ref|YP_001434806.1| - 0.0054 15.8 0.1 0.0085 15.1 0.1 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|156937010|ref|YP_001434806.1| - 0.0061 16.8 0.3 0.018 15.3 0.3 1.9 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain IlvN PF07991.12 gi|156937010|ref|YP_001434806.1| - 0.008 15.8 0.2 0.015 14.8 0.2 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain B5 PF03484.15 gi|156937010|ref|YP_001434806.1| - 0.014 15.7 0.1 0.99 9.7 0.0 3.0 3 1 0 3 3 3 0 tRNA synthetase B5 domain NAD_binding_7 PF13241.6 gi|156937010|ref|YP_001434806.1| - 0.055 13.9 0.4 0.1 13.1 0.4 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding SDH_C PF18317.1 gi|156937010|ref|YP_001434806.1| - 0.078 12.8 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 Shikimate 5'-dehydrogenase C-terminal domain 2-Hacid_dh_C PF02826.19 gi|156937010|ref|YP_001434806.1| - 0.089 12.1 0.1 0.16 11.3 0.1 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|156937010|ref|YP_001434806.1| - 0.11 12.4 0.5 0.18 11.7 0.5 1.4 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Dockerin_1 PF00404.18 gi|156937012|ref|YP_001434808.1| - 0.0023 18.1 3.3 27 5.1 0.1 2.2 1 1 0 1 1 1 1 Dockerin type I domain AIRS PF00586.24 gi|156937014|ref|YP_001434810.1| - 3.1e-10 40.6 0.1 4.9e-10 39.9 0.1 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain tRNA-synt_1 PF00133.22 gi|156937015|ref|YP_001434811.1| - 3.5e-116 388.8 1.0 5.5e-115 384.9 1.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|156937015|ref|YP_001434811.1| - 8.1e-35 120.0 3.7 1.6e-34 119.0 3.7 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|156937015|ref|YP_001434811.1| - 1.4e-25 89.9 0.7 2.8e-11 42.8 0.0 3.5 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|156937015|ref|YP_001434811.1| - 3.5e-06 26.7 0.0 0.025 14.1 0.0 2.5 1 1 1 2 2 2 2 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|156937015|ref|YP_001434811.1| - 7e-05 22.3 0.2 0.22 10.8 0.0 2.6 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain HypA PF01155.19 gi|156937015|ref|YP_001434811.1| - 0.022 14.8 0.2 1.8 8.6 0.0 2.8 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|156937015|ref|YP_001434811.1| - 0.033 14.3 1.7 0.36 11.0 0.3 2.6 2 0 0 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|156937015|ref|YP_001434811.1| - 0.1 12.6 1.6 2.3 8.3 0.3 2.5 2 0 0 2 2 2 0 Double zinc ribbon zf-TFIIB PF13453.6 gi|156937015|ref|YP_001434811.1| - 0.11 11.8 3.7 23 4.4 0.3 3.5 3 0 0 3 3 3 0 Transcription factor zinc-finger DUF2399 PF09664.10 gi|156937015|ref|YP_001434811.1| - 0.16 11.9 0.0 0.41 10.6 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) zinc_ribbon_2 PF13240.6 gi|156937015|ref|YP_001434811.1| - 9 6.2 10.4 22 4.9 1.4 3.4 3 0 0 3 3 3 0 zinc-ribbon domain DUF87 PF01935.17 gi|156937016|ref|YP_001434812.1| - 5.7e-19 69.1 0.0 9.1e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|156937016|ref|YP_001434812.1| - 3.9e-06 26.4 0.0 2.7e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 gi|156937016|ref|YP_001434812.1| - 6.9e-06 25.2 0.0 0.0011 18.0 0.0 2.5 2 1 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|156937016|ref|YP_001434812.1| - 1.7e-05 25.1 0.1 0.00017 21.9 0.1 2.2 1 1 0 1 1 1 1 AAA domain DUF853 PF05872.12 gi|156937016|ref|YP_001434812.1| - 0.00044 19.0 0.0 0.063 11.9 0.0 2.2 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|156937016|ref|YP_001434812.1| - 0.0031 16.5 0.0 0.076 11.9 0.0 2.1 2 0 0 2 2 2 1 AAA-like domain TraG-D_C PF12696.7 gi|156937016|ref|YP_001434812.1| - 0.0033 17.4 0.0 0.0096 15.9 0.0 1.8 1 1 0 1 1 1 1 TraM recognition site of TraD and TraG AAA PF00004.29 gi|156937016|ref|YP_001434812.1| - 0.0064 16.9 0.0 0.54 10.7 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|156937016|ref|YP_001434812.1| - 0.01 15.7 0.1 0.028 14.4 0.1 1.7 1 0 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 gi|156937016|ref|YP_001434812.1| - 0.011 15.0 0.0 0.03 13.6 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin ABC_tran PF00005.27 gi|156937016|ref|YP_001434812.1| - 0.013 16.0 0.0 0.033 14.7 0.0 1.6 2 0 0 2 2 1 0 ABC transporter AAA_7 PF12775.7 gi|156937016|ref|YP_001434812.1| - 0.017 14.6 0.0 0.032 13.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_33 PF13671.6 gi|156937016|ref|YP_001434812.1| - 0.032 14.4 0.0 0.058 13.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|156937016|ref|YP_001434812.1| - 0.039 14.4 0.0 0.068 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain PhoH PF02562.16 gi|156937016|ref|YP_001434812.1| - 0.042 13.3 0.0 1.1 8.7 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein ResIII PF04851.15 gi|156937016|ref|YP_001434812.1| - 0.048 13.6 0.0 0.19 11.7 0.0 1.9 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit RNA_helicase PF00910.22 gi|156937016|ref|YP_001434812.1| - 0.052 13.9 0.0 0.13 12.7 0.0 1.6 1 0 0 1 1 1 0 RNA helicase T2SSE PF00437.20 gi|156937016|ref|YP_001434812.1| - 0.054 12.6 0.0 0.084 11.9 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein NB-ARC PF00931.22 gi|156937016|ref|YP_001434812.1| - 0.098 11.8 0.0 0.17 11.0 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_14 PF13173.6 gi|156937016|ref|YP_001434812.1| - 0.12 12.4 0.1 0.53 10.3 0.0 2.1 2 1 1 3 3 2 0 AAA domain AAA_29 PF13555.6 gi|156937016|ref|YP_001434812.1| - 0.12 12.1 0.0 0.29 10.9 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|156937016|ref|YP_001434812.1| - 0.13 12.0 0.0 0.23 11.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|156937016|ref|YP_001434812.1| - 0.15 11.8 0.1 1.5 8.5 0.0 2.1 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Zot PF05707.12 gi|156937016|ref|YP_001434812.1| - 0.15 11.7 0.0 0.98 9.0 0.0 2.0 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_18 PF13238.6 gi|156937017|ref|YP_001434813.1| - 6.8e-24 84.9 0.0 8.8e-24 84.5 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|156937017|ref|YP_001434813.1| - 5.1e-07 30.2 0.4 1.5e-05 25.4 0.4 2.5 1 1 1 2 2 1 1 AAA domain dNK PF01712.19 gi|156937017|ref|YP_001434813.1| - 3.7e-05 23.7 0.1 0.072 12.9 0.0 2.2 2 0 0 2 2 2 2 Deoxynucleoside kinase AAA_33 PF13671.6 gi|156937017|ref|YP_001434813.1| - 0.00019 21.6 0.2 0.0013 18.9 0.1 2.0 1 1 1 2 2 2 1 AAA domain KTI12 PF08433.10 gi|156937017|ref|YP_001434813.1| - 0.00036 20.1 0.0 0.00057 19.4 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 Viral_helicase1 PF01443.18 gi|156937017|ref|YP_001434813.1| - 0.00042 20.1 0.1 0.00074 19.3 0.1 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase TIP49 PF06068.13 gi|156937017|ref|YP_001434813.1| - 0.00068 18.9 0.0 0.00081 18.7 0.0 1.2 1 0 0 1 1 1 1 TIP49 P-loop domain AAA PF00004.29 gi|156937017|ref|YP_001434813.1| - 0.00093 19.6 0.0 0.0015 19.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SKI PF01202.22 gi|156937017|ref|YP_001434813.1| - 0.00095 19.3 0.0 0.063 13.4 0.0 2.3 2 0 0 2 2 2 1 Shikimate kinase AAA_5 PF07728.14 gi|156937017|ref|YP_001434813.1| - 0.0017 18.3 0.0 0.0032 17.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|156937017|ref|YP_001434813.1| - 0.0031 17.3 0.0 0.0043 16.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|156937017|ref|YP_001434813.1| - 0.0051 16.7 0.0 0.0074 16.2 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain ADK PF00406.22 gi|156937017|ref|YP_001434813.1| - 0.006 16.7 0.0 0.036 14.2 0.0 2.0 2 0 0 2 2 2 1 Adenylate kinase AAA_22 PF13401.6 gi|156937017|ref|YP_001434813.1| - 0.0083 16.4 0.2 0.013 15.8 0.2 1.7 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|156937017|ref|YP_001434813.1| - 0.0093 15.3 0.1 0.015 14.6 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin Hydin_ADK PF17213.3 gi|156937017|ref|YP_001434813.1| - 0.0094 16.3 0.1 0.016 15.5 0.1 1.4 1 0 0 1 1 1 1 Hydin Adenylate kinase-like domain AAA_16 PF13191.6 gi|156937017|ref|YP_001434813.1| - 0.011 16.1 0.1 0.012 16.0 0.1 1.5 1 1 0 1 1 1 0 AAA ATPase domain PRK PF00485.18 gi|156937017|ref|YP_001434813.1| - 0.014 15.2 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family APS_kinase PF01583.20 gi|156937017|ref|YP_001434813.1| - 0.018 15.0 0.0 0.038 13.9 0.0 1.7 2 0 0 2 2 1 0 Adenylylsulphate kinase AAA_3 PF07726.11 gi|156937017|ref|YP_001434813.1| - 0.021 14.7 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|156937017|ref|YP_001434813.1| - 0.023 14.6 0.5 0.063 13.2 0.4 1.8 1 1 1 2 2 2 0 NTPase AAA_28 PF13521.6 gi|156937017|ref|YP_001434813.1| - 0.023 14.9 0.0 0.041 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|156937017|ref|YP_001434813.1| - 0.028 13.7 0.0 0.035 13.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) RNA_helicase PF00910.22 gi|156937017|ref|YP_001434813.1| - 0.033 14.6 0.0 0.068 13.6 0.0 1.6 1 0 0 1 1 1 0 RNA helicase Thymidylate_kin PF02223.17 gi|156937017|ref|YP_001434813.1| - 0.037 13.7 0.1 0.43 10.2 0.0 2.1 2 0 0 2 2 2 0 Thymidylate kinase Sigma54_activ_2 PF14532.6 gi|156937017|ref|YP_001434813.1| - 0.048 13.8 0.0 0.09 12.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain NACHT PF05729.12 gi|156937017|ref|YP_001434813.1| - 0.055 13.4 0.0 0.094 12.6 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Mg_chelatase PF01078.21 gi|156937017|ref|YP_001434813.1| - 0.055 12.8 0.0 0.088 12.2 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI ATP_bind_2 PF03668.15 gi|156937017|ref|YP_001434813.1| - 0.058 12.7 0.0 0.16 11.2 0.0 1.7 1 1 0 1 1 1 0 P-loop ATPase protein family Cytidylate_kin PF02224.18 gi|156937017|ref|YP_001434813.1| - 0.058 13.1 0.2 0.28 10.9 0.1 1.9 1 1 1 2 2 2 0 Cytidylate kinase cobW PF02492.19 gi|156937017|ref|YP_001434813.1| - 0.075 12.6 0.1 0.11 12.1 0.1 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain RuvB_N PF05496.12 gi|156937017|ref|YP_001434813.1| - 0.081 12.7 0.1 0.1 12.4 0.1 1.3 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain SRP54 PF00448.22 gi|156937017|ref|YP_001434813.1| - 0.1 12.2 0.2 0.15 11.7 0.2 1.2 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|156937017|ref|YP_001434813.1| - 0.11 12.2 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 gi|156937017|ref|YP_001434813.1| - 0.12 11.6 0.2 0.29 10.5 0.2 1.6 1 1 0 1 1 1 0 KaiC SRPRB PF09439.10 gi|156937017|ref|YP_001434813.1| - 0.13 11.6 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AP_endonuc_2 PF01261.24 gi|156937018|ref|YP_001434814.1| - 2.2e-22 79.6 0.2 4.5e-22 78.5 0.1 1.5 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel ComA PF02679.15 gi|156937018|ref|YP_001434814.1| - 0.0014 18.1 0.0 0.0034 16.9 0.0 1.8 1 1 0 1 1 1 1 (2R)-phospho-3-sulfolactate synthase (ComA) Radical_SAM PF04055.21 gi|156937018|ref|YP_001434814.1| - 0.017 15.5 0.7 0.21 12.0 0.1 2.9 2 2 0 2 2 2 0 Radical SAM superfamily ADH_zinc_N PF00107.26 gi|156937018|ref|YP_001434814.1| - 0.02 14.9 0.6 0.17 11.9 0.1 2.4 3 0 0 3 3 3 0 Zinc-binding dehydrogenase HMW1C_N PF18071.1 gi|156937018|ref|YP_001434814.1| - 0.18 11.6 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 HMW1C N-terminal dUTPase PF00692.19 gi|156937019|ref|YP_001434815.1| - 1.7e-14 53.6 0.0 2.3e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|156937019|ref|YP_001434815.1| - 2.2e-09 36.6 0.0 5.5e-09 35.3 0.0 1.7 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) AsnC_trans_reg PF01037.21 gi|156937021|ref|YP_001434817.1| - 4.5e-12 45.7 0.1 5e-12 45.6 0.1 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GYD PF08734.11 gi|156937021|ref|YP_001434817.1| - 0.009 15.9 0.0 0.01 15.7 0.0 1.3 1 1 0 1 1 1 1 GYD domain DHO_dh PF01180.21 gi|156937022|ref|YP_001434818.1| - 2.7e-52 177.8 0.1 3.1e-52 177.6 0.1 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|156937022|ref|YP_001434818.1| - 1.2e-09 37.7 0.2 7e-09 35.2 0.2 1.9 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) DUF561 PF04481.12 gi|156937022|ref|YP_001434818.1| - 0.00023 20.4 3.7 0.52 9.4 0.4 3.2 2 1 2 4 4 4 2 Protein of unknown function (DUF561) His_biosynth PF00977.21 gi|156937022|ref|YP_001434818.1| - 0.00084 18.9 0.9 0.061 12.8 0.1 2.5 1 1 1 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|156937022|ref|YP_001434818.1| - 0.0025 17.3 7.7 0.052 12.9 0.8 2.2 2 0 0 2 2 2 2 Nitronate monooxygenase IMPDH PF00478.25 gi|156937022|ref|YP_001434818.1| - 0.017 14.2 0.3 0.017 14.2 0.3 2.1 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain TPP_enzyme_M PF00205.22 gi|156937022|ref|YP_001434818.1| - 0.022 14.5 0.4 9.5 6.0 0.0 3.0 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, central domain DUF4330 PF14221.6 gi|156937023|ref|YP_001434819.1| - 0.05 13.8 0.4 0.093 12.9 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) Fer4_14 PF13394.6 gi|156937024|ref|YP_001434820.1| - 1.6e-14 54.0 0.0 2.7e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|156937024|ref|YP_001434820.1| - 2.8e-10 40.6 0.0 4.2e-10 40.0 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|156937024|ref|YP_001434820.1| - 2.8e-09 37.6 0.0 3.7e-09 37.2 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Ribosomal_L7Ae PF01248.26 gi|156937025|ref|YP_001434821.1| - 3.5e-32 110.0 0.5 3.5e-32 110.0 0.5 1.4 1 1 1 2 2 2 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|156937025|ref|YP_001434821.1| - 0.00028 20.7 0.0 0.00046 20.0 0.0 1.5 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 gi|156937025|ref|YP_001434821.1| - 0.00094 19.3 0.0 0.0011 19.0 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 FAM25 PF15825.5 gi|156937025|ref|YP_001434821.1| - 0.013 15.9 3.8 0.058 13.7 0.3 2.3 2 0 0 2 2 2 0 FAM25 family DUF711 PF05167.12 gi|156937026|ref|YP_001434822.1| - 6.9e-133 443.5 0.2 8.3e-133 443.2 0.2 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) AP_endonuc_2 PF01261.24 gi|156937026|ref|YP_001434822.1| - 0.089 12.2 0.0 0.21 11.0 0.0 1.6 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel Pribosyltran PF00156.27 gi|156937028|ref|YP_001434824.1| - 4.2e-26 91.4 0.0 5.7e-26 90.9 0.0 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain CBM_3 PF00942.18 gi|156937029|ref|YP_001434825.1| - 0.0086 16.5 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 Cellulose binding domain MS_channel PF00924.18 gi|156937030|ref|YP_001434826.1| - 1.3e-05 24.9 1.0 1.9e-05 24.3 1.0 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel Ntox27 PF15531.6 gi|156937030|ref|YP_001434826.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 27 TrkA_N PF02254.18 gi|156937031|ref|YP_001434827.1| - 5.6e-23 81.4 1.3 7.9e-23 80.9 1.3 1.2 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|156937031|ref|YP_001434827.1| - 4.7e-10 39.1 2.5 3.8e-09 36.3 0.1 2.9 2 1 1 3 3 3 1 TrkA-C domain NAD_binding_2 PF03446.15 gi|156937031|ref|YP_001434827.1| - 1.4e-06 28.6 0.2 2.1e-06 28.0 0.2 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 gi|156937031|ref|YP_001434827.1| - 1.9e-06 28.2 0.3 2.8e-06 27.7 0.3 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|156937031|ref|YP_001434827.1| - 2.5e-06 27.6 0.3 3.4e-05 23.9 0.0 2.4 2 1 1 3 3 3 1 Shikimate / quinate 5-dehydrogenase ApbA PF02558.16 gi|156937031|ref|YP_001434827.1| - 5.3e-05 22.9 0.1 0.00066 19.3 0.0 2.2 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_N PF03721.14 gi|156937031|ref|YP_001434827.1| - 6.2e-05 22.7 0.2 0.00013 21.6 0.1 1.5 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_10 PF13460.6 gi|156937031|ref|YP_001434827.1| - 0.00016 21.6 0.4 0.00021 21.2 0.4 1.2 1 0 0 1 1 1 1 NAD(P)H-binding Sacchrp_dh_NADP PF03435.18 gi|156937031|ref|YP_001434827.1| - 0.00038 20.7 0.5 0.00098 19.4 0.5 1.6 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 3HCDH_N PF02737.18 gi|156937031|ref|YP_001434827.1| - 0.0004 20.3 0.1 0.00057 19.8 0.1 1.3 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain adh_short PF00106.25 gi|156937031|ref|YP_001434827.1| - 0.00083 18.9 1.4 0.015 14.8 1.2 2.7 1 1 1 2 2 2 1 short chain dehydrogenase ADH_zinc_N PF00107.26 gi|156937031|ref|YP_001434827.1| - 0.001 19.0 0.5 0.31 11.0 0.1 2.3 2 0 0 2 2 2 1 Zinc-binding dehydrogenase F420_oxidored PF03807.17 gi|156937031|ref|YP_001434827.1| - 0.0013 19.3 0.3 0.0047 17.5 0.1 2.1 2 1 1 3 3 2 1 NADP oxidoreductase coenzyme F420-dependent ThiF PF00899.21 gi|156937031|ref|YP_001434827.1| - 0.0023 17.3 1.9 0.71 9.2 0.1 2.1 1 1 1 2 2 2 2 ThiF family UPF0146 PF03686.13 gi|156937031|ref|YP_001434827.1| - 0.0029 17.5 0.5 0.0066 16.3 0.3 1.8 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0146) 2-Hacid_dh_C PF02826.19 gi|156937031|ref|YP_001434827.1| - 0.0067 15.8 0.1 0.017 14.5 0.0 1.7 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 gi|156937031|ref|YP_001434827.1| - 0.0083 15.7 0.6 0.023 14.3 0.7 1.9 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 gi|156937031|ref|YP_001434827.1| - 0.015 14.7 0.1 0.02 14.4 0.1 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family LpxI_N PF17930.1 gi|156937031|ref|YP_001434827.1| - 0.046 13.6 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 LpxI N-terminal domain Methyltransf_11 PF08241.12 gi|156937031|ref|YP_001434827.1| - 0.11 13.1 0.1 0.25 12.0 0.1 1.6 1 1 0 1 1 1 0 Methyltransferase domain TehB PF03848.14 gi|156937031|ref|YP_001434827.1| - 0.12 11.8 0.0 0.27 10.6 0.0 1.6 1 1 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|156937031|ref|YP_001434827.1| - 0.14 12.9 0.0 0.29 11.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain DAGK_prokar PF01219.19 gi|156937032|ref|YP_001434828.1| - 0.032 14.1 0.2 0.053 13.4 0.2 1.4 1 0 0 1 1 1 0 Prokaryotic diacylglycerol kinase Metallophos PF00149.28 gi|156937033|ref|YP_001434829.1| - 9.8e-10 39.3 0.0 1.2e-09 38.9 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|156937033|ref|YP_001434829.1| - 1.2e-05 25.5 0.0 0.00033 20.9 0.0 2.0 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Ins134_P3_kin_N PF17927.1 gi|156937033|ref|YP_001434829.1| - 0.029 14.8 0.0 0.08 13.4 0.0 1.7 2 0 0 2 2 2 0 Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain PGA_cap PF09587.10 gi|156937033|ref|YP_001434829.1| - 0.073 12.5 0.0 0.097 12.1 0.0 1.4 1 1 0 1 1 1 0 Bacterial capsule synthesis protein PGA_cap Phe_hydrox_dim PF07976.12 gi|156937033|ref|YP_001434829.1| - 0.13 12.3 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain Cript PF10235.9 gi|156937034|ref|YP_001434830.1| - 0.13 12.9 0.2 0.42 11.2 0.2 1.9 1 0 0 1 1 1 0 Microtubule-associated protein CRIPT TF_Zn_Ribbon PF08271.12 gi|156937034|ref|YP_001434830.1| - 0.15 11.6 5.3 0.82 9.2 5.3 2.2 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|156937034|ref|YP_001434830.1| - 1.1 9.1 4.5 8 6.3 3.9 2.2 1 1 1 2 2 2 0 zinc-ribbon domain RNA_binding PF01877.17 gi|156937035|ref|YP_001434831.1| - 1.8e-34 118.5 0.8 2.2e-34 118.3 0.8 1.1 1 0 0 1 1 1 1 RNA binding DUF2122 PF09895.9 gi|156937036|ref|YP_001434832.1| - 1.7e-33 115.2 0.2 2.2e-33 114.8 0.2 1.2 1 0 0 1 1 1 1 RecB-family nuclease (DUF2122) SpoU_methylase PF00588.19 gi|156937036|ref|YP_001434832.1| - 0.0021 18.2 0.0 0.0024 18.0 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family Hydrolase PF00702.26 gi|156937037|ref|YP_001434833.1| - 4.5e-15 56.5 0.1 4.3e-13 50.0 0.0 2.1 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|156937037|ref|YP_001434833.1| - 1.1e-13 52.0 0.0 1.7e-13 51.4 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|156937037|ref|YP_001434833.1| - 9.9e-10 38.6 0.7 2.4e-05 24.2 0.1 2.4 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|156937037|ref|YP_001434833.1| - 0.00014 21.5 0.0 0.00023 20.8 0.0 1.3 1 0 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase Put_Phosphatase PF06888.12 gi|156937037|ref|YP_001434833.1| - 0.0002 20.8 0.0 0.012 15.0 0.0 2.0 2 0 0 2 2 2 2 Putative Phosphatase HAD_2 PF13419.6 gi|156937037|ref|YP_001434833.1| - 0.071 13.2 0.7 0.16 12.0 0.0 2.0 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase RNA_pol_Rpb1_1 PF04997.12 gi|156937038|ref|YP_001434834.1| - 7.4e-97 324.4 0.0 9.8e-97 324.0 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|156937038|ref|YP_001434834.1| - 3.3e-76 255.1 0.0 5.5e-76 254.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|156937038|ref|YP_001434834.1| - 6.4e-37 126.9 0.0 1.3e-36 125.9 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|156937038|ref|YP_001434834.1| - 2.3e-32 111.2 0.0 5e-32 110.0 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|156937038|ref|YP_001434834.1| - 1.8e-24 86.6 0.0 3e-24 85.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 DUF5343 PF17278.2 gi|156937038|ref|YP_001434834.1| - 0.017 15.2 0.0 0.045 13.8 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5343) Zn-ribbon_8 PF09723.10 gi|156937038|ref|YP_001434834.1| - 0.034 14.3 1.5 6.1 7.0 0.0 3.2 3 0 0 3 3 3 0 Zinc ribbon domain DUF1490 PF07371.12 gi|156937038|ref|YP_001434834.1| - 0.1 12.7 0.1 0.29 11.2 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1490) Sec5 PF15469.6 gi|156937038|ref|YP_001434834.1| - 0.18 11.6 0.0 0.59 9.9 0.0 1.8 2 0 0 2 2 2 0 Exocyst complex component Sec5 HypA PF01155.19 gi|156937038|ref|YP_001434834.1| - 0.22 11.5 0.6 1.7 8.7 0.1 2.4 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Osmo_CC PF08946.10 gi|156937038|ref|YP_001434834.1| - 0.27 11.5 1.4 0.83 10.0 1.4 1.8 1 0 0 1 1 1 0 Osmosensory transporter coiled coil zf-ribbon_3 PF13248.6 gi|156937038|ref|YP_001434834.1| - 0.51 9.8 6.5 6.1 6.4 0.2 3.0 3 0 0 3 3 3 0 zinc-ribbon domain zf-ISL3 PF14690.6 gi|156937038|ref|YP_001434834.1| - 3.1 8.5 9.6 13 6.6 0.1 3.7 4 0 0 4 4 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-FPG_IleRS PF06827.14 gi|156937038|ref|YP_001434834.1| - 8.4 6.4 8.0 2.1 8.3 0.3 3.1 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS RNA_pol_Rpb1_5 PF04998.17 gi|156937039|ref|YP_001434835.1| - 1.7e-58 198.1 0.1 2.3e-58 197.7 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 UBA_3 PF09288.10 gi|156937039|ref|YP_001434835.1| - 0.025 14.4 0.4 1.1 9.2 0.0 3.3 3 0 0 3 3 3 0 Fungal ubiquitin-associated domain CaM_bdg_C0 PF10562.9 gi|156937039|ref|YP_001434835.1| - 2.4 8.3 4.4 18 5.5 1.2 2.7 2 0 0 2 2 2 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit Ribosomal_L7Ae PF01248.26 gi|156937040|ref|YP_001434836.1| - 1.7e-20 72.6 0.2 1.9e-20 72.4 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KH_2 PF07650.17 gi|156937041|ref|YP_001434837.1| - 3.5e-15 55.6 1.8 2.9e-09 36.6 0.0 2.1 1 1 0 2 2 2 2 KH domain KH_5 PF13184.6 gi|156937041|ref|YP_001434837.1| - 1.5e-14 53.8 3.8 3.2e-14 52.8 0.7 2.1 2 0 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 gi|156937041|ref|YP_001434837.1| - 3.4e-10 39.7 0.2 0.00024 20.9 0.1 2.1 2 0 0 2 2 2 2 KH domain KH_1 PF00013.29 gi|156937041|ref|YP_001434837.1| - 0.0061 16.4 1.2 0.073 12.9 0.3 2.2 2 0 0 2 2 2 1 KH domain Ribosom_S12_S23 PF00164.25 gi|156937042|ref|YP_001434838.1| - 3e-47 158.9 1.6 4.8e-47 158.3 1.6 1.3 1 0 0 1 1 1 1 Ribosomal protein S12/S23 DNase-RNase PF02577.14 gi|156937043|ref|YP_001434839.1| - 2.5e-10 40.1 0.0 3.2e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Bifunctional nuclease Ribosomal_S7 PF00177.21 gi|156937044|ref|YP_001434840.1| - 3.7e-42 143.5 0.5 4.5e-42 143.2 0.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Cdc6_C PF09079.11 gi|156937045|ref|YP_001434841.1| - 3.1e-22 78.3 0.8 3.1e-21 75.1 0.6 2.8 4 0 0 4 4 2 1 CDC6, C terminal winged helix domain AAA_16 PF13191.6 gi|156937045|ref|YP_001434841.1| - 2e-11 44.5 0.0 2.4e-10 41.1 0.0 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|156937045|ref|YP_001434841.1| - 1.2e-09 38.6 0.0 4e-09 36.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|156937045|ref|YP_001434841.1| - 3.9e-08 33.8 0.0 1.5e-07 31.9 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|156937045|ref|YP_001434841.1| - 2e-07 30.6 0.0 3.1e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|156937045|ref|YP_001434841.1| - 3.5e-07 30.4 0.8 6.8e-07 29.4 0.8 1.4 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea DUF815 PF05673.13 gi|156937045|ref|YP_001434841.1| - 1.5e-05 24.3 0.0 2.8e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) ResIII PF04851.15 gi|156937045|ref|YP_001434841.1| - 0.00097 19.2 0.0 0.0018 18.3 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit NACHT PF05729.12 gi|156937045|ref|YP_001434841.1| - 0.0016 18.3 0.0 0.0045 16.9 0.0 1.7 2 0 0 2 2 2 1 NACHT domain AAA_32 PF13654.6 gi|156937045|ref|YP_001434841.1| - 0.0021 16.9 0.5 0.43 9.3 0.0 2.2 2 0 0 2 2 2 2 AAA domain PIF1 PF05970.14 gi|156937045|ref|YP_001434841.1| - 0.0039 16.4 0.1 0.0071 15.6 0.1 1.3 1 0 0 1 1 1 1 PIF1-like helicase AAA_assoc_2 PF16193.5 gi|156937045|ref|YP_001434841.1| - 0.0047 17.2 0.1 0.012 15.9 0.1 1.6 1 0 0 1 1 1 1 AAA C-terminal domain NB-ARC PF00931.22 gi|156937045|ref|YP_001434841.1| - 0.0068 15.6 1.0 0.017 14.3 0.1 2.2 2 1 1 3 3 3 1 NB-ARC domain DEAD PF00270.29 gi|156937045|ref|YP_001434841.1| - 0.0082 15.9 1.7 2.9 7.6 0.3 2.3 1 1 1 2 2 2 2 DEAD/DEAH box helicase Bac_DnaA PF00308.18 gi|156937045|ref|YP_001434841.1| - 0.0083 16.0 0.1 0.024 14.5 0.0 1.7 2 0 0 2 2 2 1 Bacterial dnaA protein TsaE PF02367.17 gi|156937045|ref|YP_001434841.1| - 0.0099 15.9 0.2 0.035 14.1 0.1 2.0 2 0 0 2 2 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|156937045|ref|YP_001434841.1| - 0.02 14.4 0.0 0.037 13.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region Kinesin PF00225.23 gi|156937045|ref|YP_001434841.1| - 0.021 13.7 0.0 0.035 13.0 0.0 1.3 1 0 0 1 1 1 0 Kinesin motor domain TIP49_C PF17856.1 gi|156937045|ref|YP_001434841.1| - 0.026 14.7 0.0 0.082 13.1 0.0 1.8 1 0 0 1 1 1 0 TIP49 AAA-lid domain AAA_19 PF13245.6 gi|156937045|ref|YP_001434841.1| - 0.031 14.6 0.5 0.11 12.8 0.2 2.1 2 1 0 2 2 2 0 AAA domain T2SSE PF00437.20 gi|156937045|ref|YP_001434841.1| - 0.068 12.2 0.0 0.15 11.1 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein Microtub_bd PF16796.5 gi|156937045|ref|YP_001434841.1| - 0.099 12.6 0.0 0.19 11.6 0.0 1.4 1 0 0 1 1 1 0 Microtubule binding Rad17 PF03215.15 gi|156937045|ref|YP_001434841.1| - 0.12 12.3 0.0 0.25 11.2 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain Sigma54_activat PF00158.26 gi|156937045|ref|YP_001434841.1| - 0.13 12.0 0.1 0.29 10.8 0.1 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain KAP_NTPase PF07693.14 gi|156937045|ref|YP_001434841.1| - 0.13 11.5 0.5 2 7.6 0.1 2.1 1 1 0 2 2 2 0 KAP family P-loop domain Torsin PF06309.11 gi|156937045|ref|YP_001434841.1| - 0.13 12.3 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Torsin AAA_18 PF13238.6 gi|156937045|ref|YP_001434841.1| - 0.18 12.4 1.1 1.5 9.3 0.1 2.7 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 gi|156937045|ref|YP_001434841.1| - 0.27 11.1 3.4 1.5 8.7 0.8 2.8 2 0 0 2 2 2 0 NTPase Thymidylate_kin PF02223.17 gi|156937045|ref|YP_001434841.1| - 1.2 8.8 3.3 1.5 8.5 0.4 2.4 2 0 0 2 2 2 0 Thymidylate kinase DUF99 PF01949.16 gi|156937046|ref|YP_001434842.1| - 1.5e-07 31.0 0.1 2.7e-07 30.2 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function DUF99 DUF2063 PF09836.9 gi|156937046|ref|YP_001434842.1| - 0.0032 17.7 0.0 0.0044 17.2 0.0 1.2 1 0 0 1 1 1 1 Putative DNA-binding domain Pribosyltran_N PF13793.6 gi|156937047|ref|YP_001434843.1| - 3.6e-26 91.4 0.0 2.2e-22 79.2 0.0 2.7 2 1 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|156937047|ref|YP_001434843.1| - 1.7e-19 69.9 1.2 1.1e-18 67.2 1.6 2.2 2 1 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|156937047|ref|YP_001434843.1| - 7.2e-11 42.4 0.3 7.2e-11 42.4 0.3 1.7 3 0 0 3 3 3 1 Phosphoribosyl synthetase-associated domain PRTase_2 PF15609.6 gi|156937047|ref|YP_001434843.1| - 0.00018 21.1 0.1 0.0023 17.4 0.1 2.0 1 1 1 2 2 2 1 Phosphoribosyl transferase UPRTase PF14681.6 gi|156937047|ref|YP_001434843.1| - 0.00088 18.8 0.0 0.0015 18.0 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase BslA PF17735.1 gi|156937047|ref|YP_001434843.1| - 0.0083 16.1 0.0 0.015 15.3 0.0 1.3 1 0 0 1 1 1 1 Biofilm surface layer A HisG_C PF08029.11 gi|156937047|ref|YP_001434843.1| - 0.097 12.8 0.3 42 4.4 0.1 3.2 3 0 0 3 3 3 0 HisG, C-terminal domain eRF1_1 PF03463.15 gi|156937048|ref|YP_001434844.1| - 2.9e-20 72.6 0.1 6.7e-20 71.4 0.0 1.6 2 0 0 2 2 2 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|156937048|ref|YP_001434844.1| - 4.7e-17 62.5 0.0 1.1e-16 61.3 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_2 PF03464.15 gi|156937048|ref|YP_001434844.1| - 6.5e-05 23.3 0.1 0.0002 21.7 0.0 1.9 2 0 0 2 2 2 1 eRF1 domain 2 HGTP_anticodon PF03129.20 gi|156937048|ref|YP_001434844.1| - 0.063 13.4 0.5 1.2 9.3 0.0 2.7 1 1 1 2 2 2 0 Anticodon binding domain baeRF_family2 PF18844.1 gi|156937048|ref|YP_001434844.1| - 1.5 8.8 6.0 1.4 9.0 2.9 2.2 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 2 Ub-Mut7C PF14451.6 gi|156937049|ref|YP_001434845.1| - 0.039 13.8 0.0 0.066 13.1 0.0 1.4 1 0 0 1 1 1 0 Mut7-C ubiquitin TGS PF02824.21 gi|156937049|ref|YP_001434845.1| - 0.15 12.1 0.1 0.25 11.4 0.1 1.3 1 0 0 1 1 1 0 TGS domain Usp PF00582.26 gi|156937050|ref|YP_001434846.1| - 4e-34 118.2 0.4 4.4e-34 118.0 0.4 1.0 1 0 0 1 1 1 1 Universal stress protein family Glyco_tran_28_C PF04101.16 gi|156937050|ref|YP_001434846.1| - 0.033 14.2 0.5 0.86 9.6 0.1 2.0 2 0 0 2 2 2 0 Glycosyltransferase family 28 C-terminal domain DXP_reductoisom PF02670.16 gi|156937050|ref|YP_001434846.1| - 0.047 14.4 0.1 0.054 14.2 0.1 1.2 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase AMP-binding PF00501.28 gi|156937051|ref|YP_001434847.1| - 5.9e-74 249.2 0.0 6.8e-74 249.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|156937051|ref|YP_001434847.1| - 6.7e-22 77.2 2.5 9.8e-22 76.6 0.7 2.3 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|156937052|ref|YP_001434848.1| - 4.4e-32 110.9 0.5 8.6e-32 110.0 0.5 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|156937052|ref|YP_001434848.1| - 5.8e-24 84.5 0.1 8.2e-24 84.0 0.1 1.2 1 0 0 1 1 1 1 AMP-binding enzyme Metallophos_2 PF12850.7 gi|156937054|ref|YP_001434850.1| - 6.6e-08 32.9 0.1 9.5e-08 32.4 0.1 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|156937054|ref|YP_001434850.1| - 1.5e-07 32.2 0.0 2.3e-07 31.5 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase HAD PF12710.7 gi|156937054|ref|YP_001434850.1| - 0.057 13.8 0.1 0.11 12.9 0.1 1.5 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase MoaE PF02391.17 gi|156937055|ref|YP_001434851.1| - 4.4e-24 84.9 0.0 6.3e-24 84.4 0.0 1.2 1 0 0 1 1 1 1 MoaE protein ThiS PF02597.20 gi|156937055|ref|YP_001434851.1| - 0.0011 19.6 0.3 0.014 16.0 0.0 2.7 3 1 0 3 3 3 1 ThiS family HMGL-like PF00682.19 gi|156937056|ref|YP_001434852.1| - 5.1e-29 101.6 0.0 7.3e-29 101.1 0.0 1.2 1 0 0 1 1 1 1 HMGL-like DIM PF08194.12 gi|156937057|ref|YP_001434853.1| - 0.16 12.2 8.3 0.2 11.9 1.1 2.2 2 0 0 2 2 2 0 DIM protein GerD PF17898.1 gi|156937058|ref|YP_001434854.1| - 0.041 13.8 0.2 0.092 12.7 0.1 1.6 1 1 0 1 1 1 0 Spore germination GerD central core domain DUF3349 PF11829.8 gi|156937058|ref|YP_001434854.1| - 0.081 13.7 0.1 0.12 13.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3349) HAD_2 PF13419.6 gi|156937059|ref|YP_001434855.1| - 0.0069 16.5 0.4 0.016 15.3 0.1 1.7 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase zf-LYAR PF08790.11 gi|156937059|ref|YP_001434855.1| - 0.018 14.9 0.1 0.039 13.9 0.1 1.5 1 0 0 1 1 1 0 LYAR-type C2HC zinc finger DUF885 PF05960.11 gi|156937060|ref|YP_001434856.1| - 1.8e-64 219.3 6.4 4.2e-58 198.3 4.4 2.9 2 1 0 2 2 2 2 Bacterial protein of unknown function (DUF885) Peptidase_M22 PF00814.25 gi|156937061|ref|YP_001434857.1| - 1.7e-72 244.4 0.0 2.1e-72 244.1 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family ATC_hydrolase PF14196.6 gi|156937062|ref|YP_001434858.1| - 0.0069 17.2 0.0 0.0098 16.7 0.0 1.2 1 0 0 1 1 1 1 L-2-amino-thiazoline-4-carboxylic acid hydrolase HTH_31 PF13560.6 gi|156937063|ref|YP_001434859.1| - 0.022 15.1 0.1 4.3 7.8 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain OMPdecase PF00215.24 gi|156937064|ref|YP_001434860.1| - 1.2e-26 93.7 2.8 1.4e-26 93.5 2.8 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family Amidohydro_2 PF04909.14 gi|156937064|ref|YP_001434860.1| - 4.2e-05 23.5 0.6 0.00014 21.8 0.4 1.6 1 1 1 2 2 2 1 Amidohydrolase PcrB PF01884.17 gi|156937064|ref|YP_001434860.1| - 0.0008 18.9 0.5 0.0016 18.0 0.1 1.7 2 0 0 2 2 2 1 PcrB family AP_endonuc_2 PF01261.24 gi|156937064|ref|YP_001434860.1| - 0.026 14.0 0.1 0.074 12.5 0.0 1.8 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel Polysacc_deac_2 PF04748.13 gi|156937064|ref|YP_001434860.1| - 0.032 13.4 0.2 0.054 12.7 0.2 1.3 1 0 0 1 1 1 0 Divergent polysaccharide deacetylase Hexokinase_2 PF03727.16 gi|156937064|ref|YP_001434860.1| - 0.047 13.1 0.1 0.06 12.8 0.1 1.2 1 0 0 1 1 1 0 Hexokinase NYN PF01936.18 gi|156937064|ref|YP_001434860.1| - 0.13 12.7 0.1 19 5.7 0.0 2.3 2 0 0 2 2 2 0 NYN domain Ribosomal_S27 PF01599.19 gi|156937065|ref|YP_001434861.1| - 6.6e-13 48.6 0.8 8.2e-13 48.3 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S27a Zn_Tnp_IS1595 PF12760.7 gi|156937065|ref|YP_001434861.1| - 0.00072 19.5 3.5 0.00084 19.3 3.5 1.1 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|156937065|ref|YP_001434861.1| - 0.0069 16.3 1.0 0.0098 15.8 1.0 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|156937065|ref|YP_001434861.1| - 0.014 15.5 0.6 0.31 11.2 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain YhfH PF14149.6 gi|156937065|ref|YP_001434861.1| - 0.018 15.0 1.9 1.3 9.0 0.1 2.1 1 1 1 2 2 2 0 YhfH-like protein Rubredoxin_2 PF18073.1 gi|156937065|ref|YP_001434861.1| - 0.026 14.2 3.2 3.4 7.5 0.2 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain zinc_ribbon_2 PF13240.6 gi|156937065|ref|YP_001434861.1| - 0.032 13.9 5.4 0.29 10.9 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DZR PF12773.7 gi|156937065|ref|YP_001434861.1| - 0.036 14.1 1.5 0.067 13.2 1.6 1.4 1 1 0 1 1 1 0 Double zinc ribbon zf_UBZ PF18439.1 gi|156937065|ref|YP_001434861.1| - 0.04 13.5 1.3 0.39 10.3 0.1 2.2 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Ribosomal_L37ae PF01780.19 gi|156937065|ref|YP_001434861.1| - 0.057 13.5 0.5 0.076 13.1 0.5 1.1 1 0 0 1 1 1 0 Ribosomal L37ae protein family zf-ribbon_3 PF13248.6 gi|156937065|ref|YP_001434861.1| - 0.067 12.6 6.3 0.18 11.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain DUF35_N PF12172.8 gi|156937065|ref|YP_001434861.1| - 0.067 13.1 3.5 1.6 8.6 0.4 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Zn_ribbon_SprT PF17283.2 gi|156937065|ref|YP_001434861.1| - 0.068 13.1 5.0 0.21 11.5 4.9 1.8 1 1 0 1 1 1 0 SprT-like zinc ribbon domain Nudix_N_2 PF14803.6 gi|156937065|ref|YP_001434861.1| - 0.071 13.0 3.4 0.18 11.7 3.4 1.7 1 1 0 1 1 1 0 Nudix N-terminal GFA PF04828.14 gi|156937065|ref|YP_001434861.1| - 0.078 13.3 1.2 5.2 7.5 0.1 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zf-ISL3 PF14690.6 gi|156937065|ref|YP_001434861.1| - 0.31 11.7 6.6 1.4 9.6 0.5 2.2 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-NADH-PPase PF09297.11 gi|156937065|ref|YP_001434861.1| - 0.4 10.4 6.0 1.3 8.7 0.6 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf_C2H2_10 PF18414.1 gi|156937065|ref|YP_001434861.1| - 0.94 9.1 3.7 5.4 6.7 0.1 2.4 3 0 0 3 3 3 0 C2H2 type zinc-finger Zn_ribbon_recom PF13408.6 gi|156937065|ref|YP_001434861.1| - 1.1 9.8 5.7 4 8.0 5.8 1.8 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain DUF4379 PF14311.6 gi|156937065|ref|YP_001434861.1| - 2.4 8.6 10.5 18 5.8 10.5 2.6 1 1 0 1 1 1 0 Probable Zinc-ribbon domain Ribosomal_S24e PF01282.19 gi|156937066|ref|YP_001434862.1| - 6.6e-18 64.4 0.1 8.3e-18 64.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S24e HTH_33 PF13592.6 gi|156937066|ref|YP_001434862.1| - 0.12 12.1 1.4 0.68 9.6 0.1 2.2 1 1 1 2 2 2 0 Winged helix-turn helix Ribosomal_S17e PF00833.18 gi|156937067|ref|YP_001434863.1| - 3.3e-18 65.8 1.1 3.6e-18 65.6 1.1 1.1 1 0 0 1 1 1 1 Ribosomal S17 Lsr2 PF11774.8 gi|156937067|ref|YP_001434863.1| - 0.073 13.2 0.2 0.1 12.8 0.1 1.3 1 1 0 1 1 1 0 Lsr2 Amidohydro_1 PF01979.20 gi|156937068|ref|YP_001434864.1| - 8e-17 61.6 0.0 2.5e-16 60.0 0.0 1.7 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|156937068|ref|YP_001434864.1| - 2.3e-07 30.7 0.1 0.00061 19.4 0.0 2.5 1 1 1 2 2 2 2 Amidohydrolase family PGK PF00162.19 gi|156937069|ref|YP_001434865.1| - 5.3e-116 387.7 0.0 6e-116 387.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase FhuF_C PF11575.8 gi|156937070|ref|YP_001434866.1| - 0.0028 17.5 5.3 0.004 17.0 1.5 2.8 2 0 0 2 2 2 1 FhuF 2Fe-2S C-terminal domain EndIII_4Fe-2S PF10576.9 gi|156937070|ref|YP_001434866.1| - 0.01 16.2 4.2 0.2 12.0 0.9 2.7 2 0 0 2 2 2 0 Iron-sulfur binding domain of endonuclease III FAD_binding_2 PF00890.24 gi|156937071|ref|YP_001434867.1| - 6.6e-113 377.9 1.0 1.1e-112 377.3 1.0 1.3 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|156937071|ref|YP_001434867.1| - 5e-32 110.6 0.2 8e-32 109.9 0.2 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term FAD_oxidored PF12831.7 gi|156937071|ref|YP_001434867.1| - 7.1e-10 38.8 3.1 9.9e-06 25.2 2.6 2.5 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|156937071|ref|YP_001434867.1| - 1e-09 38.1 0.3 3.6e-07 29.7 0.1 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|156937071|ref|YP_001434867.1| - 1.6e-09 37.8 4.2 2.7e-08 33.8 2.0 2.5 2 1 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|156937071|ref|YP_001434867.1| - 1.5e-06 27.2 0.4 0.0019 17.0 0.6 3.0 3 0 0 3 3 3 2 HI0933-like protein GIDA PF01134.22 gi|156937071|ref|YP_001434867.1| - 3.5e-05 23.1 3.4 0.00083 18.5 2.7 2.5 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|156937071|ref|YP_001434867.1| - 0.0025 18.3 0.7 0.063 13.9 0.6 2.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|156937071|ref|YP_001434867.1| - 0.0034 16.7 1.3 0.0042 16.4 0.4 1.6 2 0 0 2 2 2 1 FAD binding domain AlaDh_PNT_C PF01262.21 gi|156937071|ref|YP_001434867.1| - 0.0041 16.5 0.4 0.0095 15.3 0.4 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox_3 PF13738.6 gi|156937071|ref|YP_001434867.1| - 0.0083 15.4 0.5 0.023 14.0 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|156937071|ref|YP_001434867.1| - 0.033 13.4 0.7 2.7 7.2 0.1 3.2 3 1 0 3 3 3 0 Thi4 family Lycopene_cycl PF05834.12 gi|156937071|ref|YP_001434867.1| - 0.13 11.3 0.3 0.21 10.6 0.3 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|156937071|ref|YP_001434867.1| - 0.6 10.4 7.5 0.047 13.9 1.6 2.2 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain Metallophos PF00149.28 gi|156937073|ref|YP_001434869.1| - 5.1e-12 46.7 0.0 9.8e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|156937073|ref|YP_001434869.1| - 7.5e-09 36.0 0.0 2e-08 34.6 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DHquinase_I PF01487.15 gi|156937075|ref|YP_001434871.1| - 8.3e-21 75.3 0.0 9.9e-21 75.0 0.0 1.1 1 0 0 1 1 1 1 Type I 3-dehydroquinase Glycogen_syn PF05693.13 gi|156937076|ref|YP_001434872.1| - 0.1 11.1 0.1 0.1 11.1 0.1 1.0 1 0 0 1 1 1 0 Glycogen synthase Drf_DAD PF06345.11 gi|156937076|ref|YP_001434872.1| - 0.12 12.4 2.2 7.5 6.8 0.0 2.5 2 0 0 2 2 2 0 DRF Autoregulatory Domain GTP-bdg_N PF13167.6 gi|156937077|ref|YP_001434873.1| - 1.7e-21 76.6 0.0 4.9e-21 75.2 0.0 1.8 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal GTP-bdg_M PF16360.5 gi|156937077|ref|YP_001434873.1| - 5e-15 55.9 6.3 1.1e-14 54.8 6.3 1.6 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region MMR_HSR1 PF01926.23 gi|156937077|ref|YP_001434873.1| - 1.4e-12 47.7 0.1 4.7e-12 46.0 0.0 1.9 2 1 0 2 2 2 1 50S ribosome-binding GTPase cobW PF02492.19 gi|156937077|ref|YP_001434873.1| - 3.4e-05 23.5 0.6 0.014 14.9 0.0 2.5 1 1 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|156937077|ref|YP_001434873.1| - 7.1e-05 22.8 0.0 0.17 11.8 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase FeoB_N PF02421.18 gi|156937077|ref|YP_001434873.1| - 0.0031 17.1 0.1 0.022 14.3 0.0 2.4 2 1 0 2 2 2 1 Ferrous iron transport protein B AAA_16 PF13191.6 gi|156937077|ref|YP_001434873.1| - 0.0065 16.9 0.0 0.026 14.9 0.0 2.0 2 1 0 2 2 2 1 AAA ATPase domain ATP_bind_1 PF03029.17 gi|156937077|ref|YP_001434873.1| - 0.014 15.2 0.1 0.2 11.4 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein IIGP PF05049.13 gi|156937077|ref|YP_001434873.1| - 0.025 13.7 0.0 0.037 13.1 0.0 1.2 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) MMR_HSR1_Xtn PF16897.5 gi|156937077|ref|YP_001434873.1| - 0.031 14.3 0.0 0.064 13.3 0.0 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain ZnuA PF01297.17 gi|156937077|ref|YP_001434873.1| - 0.072 12.5 0.0 0.17 11.2 0.0 1.6 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic AAA_28 PF13521.6 gi|156937077|ref|YP_001434873.1| - 0.072 13.3 1.4 0.37 11.0 0.1 2.6 2 1 1 3 3 3 0 AAA domain Ribosomal_S19e PF01090.19 gi|156937078|ref|YP_001434874.1| - 9.5e-52 174.3 0.0 1.1e-51 174.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Rrf2 PF02082.20 gi|156937078|ref|YP_001434874.1| - 0.00095 19.5 0.5 0.0022 18.3 0.4 1.7 1 1 1 2 2 2 1 Transcriptional regulator HTH_12 PF08461.10 gi|156937078|ref|YP_001434874.1| - 0.0031 17.4 0.4 0.0088 16.0 0.1 1.9 3 0 0 3 3 3 1 Ribonuclease R winged-helix domain TrmB PF01978.19 gi|156937078|ref|YP_001434874.1| - 0.021 14.7 0.0 0.046 13.6 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB BLACT_WH PF17778.1 gi|156937078|ref|YP_001434874.1| - 0.072 13.1 0.4 0.48 10.4 0.2 2.2 1 1 1 2 2 2 0 Beta-lactamase associated winged helix domain MarR_2 PF12802.7 gi|156937078|ref|YP_001434874.1| - 0.084 12.8 0.2 0.67 9.9 0.1 2.2 2 0 0 2 2 2 0 MarR family DUF2250 PF10007.9 gi|156937078|ref|YP_001434874.1| - 0.11 12.7 0.0 0.21 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_45 PF14947.6 gi|156937078|ref|YP_001434874.1| - 0.12 12.4 0.0 0.18 11.8 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix dsDNA_bind PF01984.20 gi|156937079|ref|YP_001434875.1| - 1.3e-23 83.4 13.8 1.5e-23 83.2 13.8 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain Radial_spoke_3 PF06098.11 gi|156937079|ref|YP_001434875.1| - 0.0057 16.0 9.6 0.0062 15.9 9.6 1.0 1 0 0 1 1 1 1 Radial spoke protein 3 DUF977 PF06163.11 gi|156937079|ref|YP_001434875.1| - 0.13 12.2 0.3 0.13 12.2 0.3 1.7 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF977) NINJA_B PF16136.5 gi|156937079|ref|YP_001434875.1| - 3.2 8.1 8.8 2.8 8.3 8.3 1.3 1 1 0 1 1 1 0 Putative nuclear localisation signal Ribosomal_L39 PF00832.20 gi|156937080|ref|YP_001434876.1| - 3.2e-18 65.1 15.0 3.8e-18 64.8 15.0 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein Ter PF05472.11 gi|156937080|ref|YP_001434876.1| - 0.072 12.1 4.7 0.077 12.0 4.7 1.0 1 0 0 1 1 1 0 DNA replication terminus site-binding protein (Ter protein) Ribosomal_L31e PF01198.19 gi|156937081|ref|YP_001434877.1| - 9.7e-18 64.2 0.0 1.2e-17 63.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e Tautomerase_2 PF14552.6 gi|156937081|ref|YP_001434877.1| - 0.093 12.8 0.0 0.15 12.2 0.0 1.5 2 0 0 2 2 2 0 Tautomerase enzyme eIF-6 PF01912.18 gi|156937082|ref|YP_001434878.1| - 2.4e-70 236.0 1.2 2.7e-70 235.8 1.2 1.0 1 0 0 1 1 1 1 eIF-6 family NTP_transferase PF00483.23 gi|156937083|ref|YP_001434879.1| - 8.8e-45 153.2 0.0 1.1e-44 153.0 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|156937083|ref|YP_001434879.1| - 5.7e-16 59.3 0.0 7.9e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|156937083|ref|YP_001434879.1| - 0.023 14.4 0.1 0.053 13.3 0.0 1.6 2 0 0 2 2 2 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ribosomal_S26e PF01283.19 gi|156937084|ref|YP_001434880.1| - 2.3e-26 92.3 2.4 2.7e-26 92.1 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e zf-RING_7 PF02591.15 gi|156937084|ref|YP_001434880.1| - 0.00044 20.4 0.3 0.012 15.8 0.2 2.3 2 0 0 2 2 2 1 C4-type zinc ribbon domain Tat PF00539.18 gi|156937084|ref|YP_001434880.1| - 0.0065 16.6 4.1 0.0091 16.1 0.8 2.3 2 1 0 2 2 2 1 Transactivating regulatory protein (Tat) DZR PF12773.7 gi|156937084|ref|YP_001434880.1| - 0.035 14.1 1.2 0.13 12.3 0.1 2.0 2 0 0 2 2 2 0 Double zinc ribbon Yippee-Mis18 PF03226.14 gi|156937084|ref|YP_001434880.1| - 0.11 12.7 1.5 0.5 10.6 1.5 1.8 1 1 1 2 2 2 0 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Methyltrn_RNA_2 PF04013.12 gi|156937085|ref|YP_001434881.1| - 2.1e-28 99.4 0.0 4.7e-28 98.2 0.0 1.6 1 1 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase Hydantoinase_B PF02538.14 gi|156937086|ref|YP_001434882.1| - 2.9e-139 464.8 0.0 3.3e-139 464.6 0.0 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase ATPase PF06745.13 gi|156937087|ref|YP_001434883.1| - 2.9e-88 295.1 0.0 3.3e-88 294.9 0.0 1.0 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|156937087|ref|YP_001434883.1| - 3.2e-07 29.4 0.0 4.9e-07 28.8 0.0 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein AAA_25 PF13481.6 gi|156937087|ref|YP_001434883.1| - 0.00035 20.2 0.0 0.0008 19.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|156937087|ref|YP_001434883.1| - 0.015 14.6 0.0 0.026 13.8 0.0 1.3 1 0 0 1 1 1 0 Rad51 T2SSE PF00437.20 gi|156937087|ref|YP_001434883.1| - 0.022 13.8 0.0 0.042 12.9 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein MEDS PF14417.6 gi|156937087|ref|YP_001434883.1| - 0.027 14.3 0.0 0.049 13.5 0.0 1.5 1 1 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_19 PF13245.6 gi|156937087|ref|YP_001434883.1| - 0.037 14.4 0.1 0.078 13.3 0.1 1.5 1 0 0 1 1 1 0 AAA domain HutP PF09021.11 gi|156937087|ref|YP_001434883.1| - 0.041 14.2 0.0 0.089 13.1 0.0 1.5 2 0 0 2 2 2 0 HutP DUF2075 PF09848.9 gi|156937087|ref|YP_001434883.1| - 0.051 12.8 0.0 0.068 12.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) DnaB_C PF03796.15 gi|156937087|ref|YP_001434883.1| - 0.061 12.6 0.0 0.085 12.2 0.0 1.4 1 1 0 1 1 1 0 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|156937087|ref|YP_001434883.1| - 0.12 12.8 0.0 0.22 11.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain MTS PF05175.14 gi|156937088|ref|YP_001434884.1| - 0.0001 21.9 0.8 0.0085 15.7 0.8 2.1 1 1 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|156937088|ref|YP_001434884.1| - 0.0067 15.9 0.2 0.0097 15.3 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 gi|156937088|ref|YP_001434884.1| - 0.018 15.7 0.0 0.03 15.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156937088|ref|YP_001434884.1| - 0.044 14.4 0.0 0.069 13.8 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 gi|156937088|ref|YP_001434884.1| - 0.081 12.6 0.1 3.4 7.3 0.0 2.2 1 1 1 2 2 2 0 Putative RNA methylase family UPF0020 Methyltransf_31 PF13847.6 gi|156937088|ref|YP_001434884.1| - 0.15 11.9 0.2 0.24 11.2 0.2 1.3 1 0 0 1 1 1 0 Methyltransferase domain Peptidase_M24 PF00557.24 gi|156937089|ref|YP_001434885.1| - 3e-34 118.6 0.0 3.5e-34 118.3 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 PSK_trans_fac PF07704.11 gi|156937089|ref|YP_001434885.1| - 0.041 14.6 0.3 2.6 8.9 0.2 2.5 2 0 0 2 2 2 0 Rv0623-like transcription factor AFOR_N PF02730.15 gi|156937090|ref|YP_001434886.1| - 2.6e-30 105.8 0.0 1.7e-29 103.2 0.0 2.0 2 0 0 2 2 2 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain AFOR_C PF01314.18 gi|156937090|ref|YP_001434886.1| - 1.4e-17 63.8 0.0 3.7e-17 62.4 0.0 1.5 1 1 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Trm112p PF03966.16 gi|156937091|ref|YP_001434887.1| - 2.3e-15 56.9 1.3 3.4e-15 56.4 1.3 1.3 1 0 0 1 1 1 1 Trm112p-like protein zf_C2H2_10 PF18414.1 gi|156937091|ref|YP_001434887.1| - 0.037 13.6 1.0 0.6 9.7 0.0 2.5 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF35_N PF12172.8 gi|156937091|ref|YP_001434887.1| - 0.066 13.1 3.2 0.19 11.6 0.0 2.8 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PhnA_Zn_Ribbon PF08274.12 gi|156937091|ref|YP_001434887.1| - 0.14 12.1 10.0 2.4 8.2 5.5 3.1 2 1 0 2 2 2 0 PhnA Zinc-Ribbon ADK_lid PF05191.14 gi|156937091|ref|YP_001434887.1| - 0.38 10.8 5.6 0.71 9.9 0.0 2.7 2 1 0 2 2 2 0 Adenylate kinase, active site lid zinc_ribbon_9 PF14369.6 gi|156937091|ref|YP_001434887.1| - 0.78 10.0 4.7 5.7 7.3 0.1 2.7 2 1 0 2 2 2 0 zinc-ribbon zf-C2H2_4 PF13894.6 gi|156937091|ref|YP_001434887.1| - 0.79 10.7 7.5 2.7 9.1 0.0 3.6 4 0 0 4 4 4 0 C2H2-type zinc finger zinc_ribbon_2 PF13240.6 gi|156937091|ref|YP_001434887.1| - 1.4 8.8 13.3 2.1 8.2 0.1 4.1 5 0 0 5 5 5 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|156937091|ref|YP_001434887.1| - 2.9 7.9 7.4 12 6.0 0.1 2.6 2 2 0 2 2 2 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|156937091|ref|YP_001434887.1| - 5.2 6.6 11.1 2.3 7.7 0.1 3.3 4 0 0 4 4 4 0 zinc-ribbon domain DZR PF12773.7 gi|156937091|ref|YP_001434887.1| - 6.5 6.9 8.0 53 4.0 8.0 2.2 1 1 0 1 1 1 0 Double zinc ribbon MFS_1 PF07690.16 gi|156937092|ref|YP_001434888.1| - 2e-09 36.8 43.5 1.4e-08 34.0 39.4 2.9 1 1 1 2 2 2 1 Major Facilitator Superfamily TAF PF02969.17 gi|156937093|ref|YP_001434889.1| - 0.03 14.5 0.0 0.062 13.5 0.0 1.5 1 1 0 1 1 1 0 TATA box binding protein associated factor (TAF) Radical_SAM PF04055.21 gi|156937094|ref|YP_001434890.1| - 0.00041 20.8 4.4 0.0007 20.0 0.5 2.8 2 1 0 2 2 2 1 Radical SAM superfamily DUF1848 PF08902.11 gi|156937094|ref|YP_001434890.1| - 0.11 12.2 0.1 16 5.1 0.2 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF1848) UDG PF03167.19 gi|156937095|ref|YP_001434891.1| - 2.2e-48 164.1 0.0 2.7e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily CDPS PF16715.5 gi|156937095|ref|YP_001434891.1| - 0.16 11.6 0.0 0.27 10.9 0.0 1.3 1 0 0 1 1 1 0 Cyclodipeptide synthase MFS_1 PF07690.16 gi|156937096|ref|YP_001434892.1| - 1.3e-15 57.2 33.7 1.3e-15 57.2 33.7 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily ACT_6 PF13740.6 gi|156937097|ref|YP_001434893.1| - 3.1e-18 65.5 0.6 3.6e-18 65.3 0.6 1.1 1 0 0 1 1 1 1 ACT domain ACT PF01842.25 gi|156937097|ref|YP_001434893.1| - 1.1e-10 41.1 0.8 1.5e-10 40.6 0.8 1.1 1 0 0 1 1 1 1 ACT domain ACT_4 PF13291.6 gi|156937097|ref|YP_001434893.1| - 2.2e-06 28.2 1.0 2.5e-06 28.0 0.3 1.5 2 0 0 2 2 2 1 ACT domain ACT_7 PF13840.6 gi|156937097|ref|YP_001434893.1| - 3.8e-06 26.6 1.1 5.7e-06 26.0 1.0 1.4 1 1 0 1 1 1 1 ACT domain DUF1456 PF07308.13 gi|156937097|ref|YP_001434893.1| - 0.12 12.8 0.0 0.2 12.0 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1456) Aconitase_C PF00694.19 gi|156937098|ref|YP_001434894.1| - 1e-18 67.9 0.1 1.7e-18 67.2 0.1 1.4 1 1 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|156937098|ref|YP_001434894.1| - 0.0019 17.9 0.2 0.017 14.7 0.2 2.0 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus LDcluster4 PF18306.1 gi|156937099|ref|YP_001434895.1| - 4.4e-15 55.6 0.2 5e-15 55.4 0.2 1.1 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 gi|156937099|ref|YP_001434895.1| - 0.0005 20.2 0.1 0.00056 20.0 0.1 1.3 1 0 0 1 1 1 1 Possible lysine decarboxylase Glyco_trans_4_2 PF13477.6 gi|156937099|ref|YP_001434895.1| - 0.025 14.6 0.0 0.039 14.0 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase 4-like SpoIIAA-like PF11964.8 gi|156937099|ref|YP_001434895.1| - 0.049 14.7 0.0 0.058 14.4 0.0 1.3 1 0 0 1 1 1 0 SpoIIAA-like Nmad4 PF18756.1 gi|156937099|ref|YP_001434895.1| - 0.085 13.2 0.0 0.18 12.1 0.0 1.6 2 0 0 2 2 2 0 Nucleotide modification associated domain 4 ATPase PF06745.13 gi|156937100|ref|YP_001434896.1| - 7.6e-57 192.3 0.6 8.9e-57 192.1 0.6 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|156937100|ref|YP_001434896.1| - 5e-08 32.8 0.1 1.1e-07 31.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|156937100|ref|YP_001434896.1| - 9.7e-08 31.6 0.0 1.5e-07 30.9 0.0 1.3 1 1 0 1 1 1 1 Rad51 IstB_IS21 PF01695.17 gi|156937100|ref|YP_001434896.1| - 7.3e-06 25.8 0.0 1.4e-05 24.9 0.0 1.4 1 1 0 1 1 1 1 IstB-like ATP binding protein DnaB_C PF03796.15 gi|156937100|ref|YP_001434896.1| - 2.8e-05 23.6 0.0 5.7e-05 22.6 0.0 1.6 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain GvpD PF07088.11 gi|156937100|ref|YP_001434896.1| - 0.00024 19.9 0.1 0.00039 19.2 0.1 1.5 1 1 0 1 1 1 1 GvpD gas vesicle protein PAXNEB PF05625.11 gi|156937100|ref|YP_001434896.1| - 0.00041 19.6 0.0 0.02 14.1 0.0 2.0 1 1 1 2 2 2 1 PAXNEB protein MEDS PF14417.6 gi|156937100|ref|YP_001434896.1| - 0.0013 18.5 0.0 0.0026 17.6 0.0 1.4 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain AAA_24 PF13479.6 gi|156937100|ref|YP_001434896.1| - 0.0015 18.3 0.5 0.0027 17.5 0.1 1.7 2 1 0 2 2 2 1 AAA domain AAA PF00004.29 gi|156937100|ref|YP_001434896.1| - 0.0049 17.3 0.1 0.011 16.2 0.1 1.6 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) RecA PF00154.21 gi|156937100|ref|YP_001434896.1| - 0.0075 15.8 0.1 0.012 15.1 0.1 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_14 PF13173.6 gi|156937100|ref|YP_001434896.1| - 0.027 14.5 0.0 0.085 12.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|156937100|ref|YP_001434896.1| - 0.028 14.4 0.0 0.039 14.0 0.0 1.2 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit MafB PF06255.13 gi|156937100|ref|YP_001434896.1| - 0.046 13.2 0.0 0.062 12.7 0.0 1.2 1 0 0 1 1 1 0 Neisseria toxin MafB DUF2075 PF09848.9 gi|156937100|ref|YP_001434896.1| - 0.071 12.3 0.2 0.11 11.7 0.2 1.4 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) SRP54 PF00448.22 gi|156937100|ref|YP_001434896.1| - 0.1 12.2 0.0 0.2 11.2 0.0 1.4 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain T2SSE PF00437.20 gi|156937100|ref|YP_001434896.1| - 0.12 11.4 0.0 0.18 10.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein PDT PF00800.18 gi|156937101|ref|YP_001434897.1| - 3.3e-54 183.5 0.0 4.2e-54 183.2 0.0 1.1 1 0 0 1 1 1 1 Prephenate dehydratase ACT PF01842.25 gi|156937101|ref|YP_001434897.1| - 8.8e-10 38.2 0.0 4.2e-09 36.0 0.0 2.2 2 0 0 2 2 2 1 ACT domain PASTA PF03793.19 gi|156937101|ref|YP_001434897.1| - 0.081 12.8 0.0 0.16 11.8 0.0 1.5 1 0 0 1 1 1 0 PASTA domain AsnC_trans_reg PF01037.21 gi|156937102|ref|YP_001434898.1| - 2.8e-11 43.2 0.1 3.2e-11 43.0 0.1 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|156937102|ref|YP_001434898.1| - 0.0091 16.0 0.1 0.027 14.5 0.1 1.6 1 1 0 1 1 1 1 NapD protein GYD PF08734.11 gi|156937102|ref|YP_001434898.1| - 0.018 14.9 0.0 0.021 14.8 0.0 1.2 1 0 0 1 1 1 0 GYD domain ACT_4 PF13291.6 gi|156937102|ref|YP_001434898.1| - 0.047 14.3 0.1 0.26 11.9 0.2 1.9 1 1 1 2 2 2 0 ACT domain DUF1743 PF08489.11 gi|156937103|ref|YP_001434899.1| - 7.6e-12 45.3 0.0 1.6e-11 44.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) Zn_Tnp_IS1595 PF12760.7 gi|156937103|ref|YP_001434899.1| - 0.00014 21.7 1.7 0.00052 19.9 1.3 2.2 2 0 0 2 2 2 1 Transposase zinc-ribbon domain YdjO PF14169.6 gi|156937103|ref|YP_001434899.1| - 0.029 14.1 0.5 0.17 11.6 0.1 2.2 2 0 0 2 2 2 0 Cold-inducible protein YdjO DZR PF12773.7 gi|156937103|ref|YP_001434899.1| - 0.056 13.5 0.9 0.13 12.3 0.9 1.5 1 0 0 1 1 1 0 Double zinc ribbon RNA_POL_M_15KD PF02150.16 gi|156937103|ref|YP_001434899.1| - 0.16 11.9 2.2 0.32 10.9 2.2 1.4 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-C4_Topoisom PF01396.19 gi|156937103|ref|YP_001434899.1| - 0.18 11.6 4.0 0.18 11.6 0.7 2.3 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-NADH-PPase PF09297.11 gi|156937103|ref|YP_001434899.1| - 0.2 11.4 3.3 0.56 9.9 3.3 1.7 1 0 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain zf-IS66 PF13005.7 gi|156937103|ref|YP_001434899.1| - 0.37 11.2 2.4 1.1 9.8 0.4 2.4 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-ribbon_3 PF13248.6 gi|156937103|ref|YP_001434899.1| - 0.39 10.2 8.2 1.6 8.2 0.5 2.6 3 0 0 3 3 3 0 zinc-ribbon domain IBR PF01485.21 gi|156937103|ref|YP_001434899.1| - 0.42 10.9 3.6 0.19 11.9 0.5 1.9 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain Zn-ribbon_8 PF09723.10 gi|156937103|ref|YP_001434899.1| - 1.8 8.7 7.8 4.6 7.4 0.6 3.1 2 1 2 4 4 4 0 Zinc ribbon domain AIRS_C PF02769.22 gi|156937105|ref|YP_001434901.1| - 2.3e-19 70.1 1.1 3.1e-19 69.6 0.1 1.7 2 0 0 2 2 2 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|156937105|ref|YP_001434901.1| - 3.8e-13 49.9 0.2 5.5e-12 46.2 0.4 2.3 2 0 0 2 2 2 1 AIR synthase related protein, N-terminal domain bPH_2 PF03703.14 gi|156937106|ref|YP_001434902.1| - 4.5e-06 26.7 0.0 7e-06 26.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial PH domain DUF3318 PF11780.8 gi|156937106|ref|YP_001434902.1| - 0.16 11.9 1.9 0.29 11.1 1.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3318) HGTP_anticodon PF03129.20 gi|156937107|ref|YP_001434903.1| - 2.3e-19 69.4 2.2 5.3e-19 68.2 0.9 2.3 2 0 0 2 2 2 1 Anticodon binding domain tRNA-Thr_ED PF08915.11 gi|156937107|ref|YP_001434903.1| - 8.4e-11 42.1 0.3 2.4e-10 40.6 0.0 1.8 2 0 0 2 2 2 1 Archaea-specific editing domain of threonyl-tRNA synthetase tRNA-synt_2b PF00587.25 gi|156937107|ref|YP_001434903.1| - 0.013 15.5 0.0 0.025 14.5 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) Cytochrom_C_asm PF01578.20 gi|156937108|ref|YP_001434904.1| - 3.2e-16 59.8 19.1 3.2e-16 59.8 19.1 5.1 3 1 1 4 4 4 1 Cytochrome C assembly protein CcmF_C PF16327.5 gi|156937108|ref|YP_001434904.1| - 6.1e-08 32.3 15.2 1.7e-05 24.3 9.8 3.0 2 1 1 3 3 3 2 Cytochrome c-type biogenesis protein CcmF C-terminal Peptidase_M20 PF01546.28 gi|156937109|ref|YP_001434905.1| - 5.7e-29 101.3 0.1 8.7e-29 100.7 0.1 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|156937109|ref|YP_001434905.1| - 4.4e-18 65.2 0.0 7.5e-18 64.4 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Thioredoxin PF00085.20 gi|156937110|ref|YP_001434906.1| - 7.3e-12 45.2 0.0 1.5e-11 44.2 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|156937110|ref|YP_001434906.1| - 3.1e-08 34.0 0.5 1.2e-07 32.1 0.2 2.1 2 1 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_4 PF13462.6 gi|156937110|ref|YP_001434906.1| - 0.0016 18.7 0.1 0.2 11.8 0.0 2.5 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_3 PF13192.6 gi|156937110|ref|YP_001434906.1| - 0.0043 17.1 0.0 0.02 15.0 0.0 2.0 2 0 0 2 2 2 1 Thioredoxin domain Thioredoxin_8 PF13905.6 gi|156937110|ref|YP_001434906.1| - 0.015 15.6 0.1 3.9 7.9 0.1 2.4 1 1 1 2 2 2 0 Thioredoxin-like TraF PF13728.6 gi|156937110|ref|YP_001434906.1| - 0.017 14.9 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 F plasmid transfer operon protein Cytochrome_CBB3 PF13442.6 gi|156937110|ref|YP_001434906.1| - 0.049 14.0 0.0 0.11 12.8 0.0 1.7 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III Thioredoxin_7 PF13899.6 gi|156937110|ref|YP_001434906.1| - 0.08 13.1 0.1 0.23 11.7 0.1 1.7 1 1 0 1 1 1 0 Thioredoxin-like AbiTii PF18864.1 gi|156937110|ref|YP_001434906.1| - 0.2 11.8 0.0 0.45 10.6 0.0 1.5 2 0 0 2 2 2 0 AbiTii DUF2070 PF09843.9 gi|156937110|ref|YP_001434906.1| - 1.7 6.9 6.9 2.5 6.3 6.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) GHMP_kinases_N PF00288.26 gi|156937111|ref|YP_001434907.1| - 1.1e-06 28.7 0.2 1.8e-06 28.1 0.2 1.3 1 0 0 1 1 1 1 GHMP kinases N terminal domain Met_10 PF02475.16 gi|156937113|ref|YP_001434909.1| - 3.5e-48 164.0 0.1 6.4e-48 163.1 0.1 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Trm5_N PF18093.1 gi|156937113|ref|YP_001434909.1| - 1.8e-13 50.1 0.7 4.6e-13 48.8 0.7 1.7 1 0 0 1 1 1 1 tRNA methyltransferase 5 N-terminal domain Cons_hypoth95 PF03602.15 gi|156937113|ref|YP_001434909.1| - 5.8e-09 35.8 0.0 1e-08 35.0 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_25 PF13649.6 gi|156937113|ref|YP_001434909.1| - 1.1e-08 35.6 0.0 2.7e-08 34.4 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|156937113|ref|YP_001434909.1| - 1.7e-07 30.9 0.0 2.8e-07 30.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|156937113|ref|YP_001434909.1| - 1.8e-07 30.9 0.1 3.5e-07 29.9 0.0 1.4 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) TRM PF02005.16 gi|156937113|ref|YP_001434909.1| - 5.1e-07 29.2 0.3 8.9e-07 28.4 0.3 1.4 1 1 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_11 PF08241.12 gi|156937113|ref|YP_001434909.1| - 2.1e-06 28.3 0.0 7.9e-06 26.4 0.0 2.1 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|156937113|ref|YP_001434909.1| - 2.5e-06 27.4 0.0 4.4e-06 26.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 gi|156937113|ref|YP_001434909.1| - 5.6e-06 26.0 0.0 9.7e-06 25.3 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltr_RsmB-F PF01189.17 gi|156937113|ref|YP_001434909.1| - 7.2e-06 25.8 0.0 1.7e-05 24.5 0.0 1.6 2 0 0 2 2 1 1 16S rRNA methyltransferase RsmB/F MetW PF07021.12 gi|156937113|ref|YP_001434909.1| - 1.1e-05 25.2 0.0 2e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_16 PF10294.9 gi|156937113|ref|YP_001434909.1| - 0.0011 18.7 0.0 0.0019 18.0 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_24 PF13578.6 gi|156937113|ref|YP_001434909.1| - 0.0015 19.6 0.0 0.0031 18.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltrans_SAM PF10672.9 gi|156937113|ref|YP_001434909.1| - 0.0023 17.2 0.0 0.003 16.8 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Methyltransf_18 PF12847.7 gi|156937113|ref|YP_001434909.1| - 0.0069 16.3 0.1 0.014 15.4 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|156937113|ref|YP_001434909.1| - 0.0087 16.8 0.0 0.019 15.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|156937113|ref|YP_001434909.1| - 0.0094 15.8 0.0 0.021 14.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|156937113|ref|YP_001434909.1| - 0.011 15.0 0.1 0.018 14.4 0.1 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family DUF5553 PF17707.1 gi|156937113|ref|YP_001434909.1| - 0.016 14.7 0.1 3.1 7.2 0.0 2.1 1 1 1 2 2 2 0 Family of unknown function (DUF5553) Fibrillarin PF01269.17 gi|156937113|ref|YP_001434909.1| - 0.036 13.2 0.0 0.049 12.7 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin DNA_methylase PF00145.17 gi|156937113|ref|YP_001434909.1| - 0.048 13.0 0.0 0.073 12.4 0.0 1.3 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase UPF0020 PF01170.18 gi|156937113|ref|YP_001434909.1| - 0.079 12.6 0.1 1.2 8.8 0.1 2.5 1 1 1 2 2 2 0 Putative RNA methylase family UPF0020 Med20 PF08612.11 gi|156937113|ref|YP_001434909.1| - 0.091 12.1 0.0 0.16 11.3 0.0 1.3 1 0 0 1 1 1 0 TATA-binding related factor (TRF) of subunit 20 of Mediator complex MethyltransfD12 PF02086.15 gi|156937113|ref|YP_001434909.1| - 0.12 12.0 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase CMAS PF02353.20 gi|156937116|ref|YP_001434912.1| - 1.5e-08 34.3 0.5 3.3e-08 33.1 0.2 1.6 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase DOT1 PF08123.13 gi|156937116|ref|YP_001434912.1| - 2.3e-07 30.5 0.0 3.7e-06 26.6 0.0 2.0 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_25 PF13649.6 gi|156937116|ref|YP_001434912.1| - 6.4e-06 26.8 0.0 9.4e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156937116|ref|YP_001434912.1| - 2.5e-05 24.8 0.0 3.8e-05 24.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|156937116|ref|YP_001434912.1| - 7.9e-05 21.8 0.1 0.0001 21.5 0.1 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase PrmA PF06325.13 gi|156937116|ref|YP_001434912.1| - 0.00015 21.3 0.1 0.0002 20.8 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|156937116|ref|YP_001434912.1| - 0.00019 21.2 0.2 0.00032 20.5 0.2 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|156937116|ref|YP_001434912.1| - 0.0015 18.4 0.0 0.0019 18.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|156937116|ref|YP_001434912.1| - 0.015 14.9 0.2 0.023 14.3 0.2 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Met_10 PF02475.16 gi|156937116|ref|YP_001434912.1| - 0.091 12.5 0.0 0.12 12.1 0.0 1.1 1 0 0 1 1 1 0 Met-10+ like-protein MTS PF05175.14 gi|156937116|ref|YP_001434912.1| - 0.15 11.6 0.1 0.21 11.1 0.1 1.1 1 0 0 1 1 1 0 Methyltransferase small domain N6_N4_Mtase PF01555.18 gi|156937116|ref|YP_001434912.1| - 0.17 11.5 0.0 0.25 11.0 0.0 1.2 1 0 0 1 1 1 0 DNA methylase eIF2_C PF09173.11 gi|156937117|ref|YP_001434913.1| - 2.3e-29 101.4 0.1 5.2e-29 100.3 0.1 1.6 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 gi|156937117|ref|YP_001434913.1| - 4.9e-29 101.3 0.1 3.2e-28 98.6 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 gi|156937117|ref|YP_001434913.1| - 3e-08 33.9 4.3 7.9e-08 32.6 1.1 2.9 3 0 0 3 3 3 1 Elongation factor Tu domain 2 RsgA_GTPase PF03193.16 gi|156937117|ref|YP_001434913.1| - 3.1e-05 24.0 0.3 0.0012 18.8 0.1 2.2 2 0 0 2 2 2 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|156937117|ref|YP_001434913.1| - 3.6e-05 23.8 0.0 0.00012 22.2 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 gi|156937117|ref|YP_001434913.1| - 0.00024 20.8 0.3 0.83 9.4 0.0 2.4 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 gi|156937117|ref|YP_001434913.1| - 0.002 18.1 0.1 0.0035 17.3 0.1 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|156937117|ref|YP_001434913.1| - 0.0035 16.9 1.3 1.2 8.6 0.3 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B Spore_IV_A PF09547.10 gi|156937117|ref|YP_001434913.1| - 0.13 11.1 0.0 6.2 5.6 0.0 2.1 2 0 0 2 2 2 0 Stage IV sporulation protein A (spore_IV_A) ALAD PF00490.21 gi|156937118|ref|YP_001434914.1| - 3.4e-147 489.7 0.0 3.9e-147 489.5 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase AIM24 PF01987.17 gi|156937119|ref|YP_001434915.1| - 4e-43 147.6 0.0 4.4e-43 147.4 0.0 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 Cas_DxTHG PF09455.10 gi|156937120|ref|YP_001434916.1| - 1.7e-44 152.9 11.4 2.2e-44 152.5 11.4 1.1 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family Arfaptin PF06456.13 gi|156937120|ref|YP_001434916.1| - 0.0044 16.6 2.2 0.0044 16.6 2.2 2.0 2 0 0 2 2 2 1 Arfaptin-like domain RAMPs PF03787.15 gi|156937121|ref|YP_001434917.1| - 2.2e-26 93.2 0.0 2.7e-26 92.9 0.0 1.1 1 0 0 1 1 1 1 RAMP superfamily DUF3692 PF12469.8 gi|156937122|ref|YP_001434918.1| - 9.3e-29 99.9 0.0 2.9e-28 98.3 0.0 1.9 1 0 0 1 1 1 1 CRISPR-associated protein Cas_Cmr3 PF09700.10 gi|156937123|ref|YP_001434919.1| - 0.0025 17.3 0.0 0.48 9.8 0.0 2.2 2 0 0 2 2 2 2 CRISPR-associated protein (Cas_Cmr3) CTP_synth_N PF06418.14 gi|156937125|ref|YP_001434921.1| - 6.7e-109 363.3 0.0 1e-108 362.6 0.0 1.3 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|156937125|ref|YP_001434921.1| - 2.2e-47 161.3 0.0 3.6e-47 160.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|156937125|ref|YP_001434921.1| - 1.1e-09 38.4 0.0 2.6e-09 37.1 0.0 1.6 1 0 0 1 1 1 1 Peptidase C26 GATase_3 PF07685.14 gi|156937125|ref|YP_001434921.1| - 0.033 13.8 0.0 0.065 12.8 0.0 1.5 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain SDH_beta PF03315.15 gi|156937125|ref|YP_001434921.1| - 0.18 12.2 0.0 0.66 10.3 0.0 1.8 2 0 0 2 2 2 0 Serine dehydratase beta chain Radical_SAM PF04055.21 gi|156937126|ref|YP_001434922.1| - 2.8e-13 50.6 0.0 5.7e-13 49.6 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|156937126|ref|YP_001434922.1| - 3.4e-08 33.8 0.0 6.1e-08 33.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156937126|ref|YP_001434922.1| - 0.00026 21.1 0.0 0.00065 19.8 0.0 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain DNA_ligase_C PF17879.1 gi|156937126|ref|YP_001434922.1| - 0.056 13.5 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 DNA ligase C-terminal domain Ribosomal_L12 PF00542.19 gi|156937127|ref|YP_001434923.1| - 0.07 13.5 0.8 12 6.3 0.3 2.4 1 1 1 2 2 2 0 Ribosomal protein L7/L12 C-terminal domain AIRC PF00731.20 gi|156937128|ref|YP_001434924.1| - 9.6e-50 168.0 0.5 1.2e-49 167.8 0.5 1.0 1 0 0 1 1 1 1 AIR carboxylase KaiB PF07689.12 gi|156937128|ref|YP_001434924.1| - 0.09 12.5 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 KaiB domain Endonuclease_5 PF04493.14 gi|156937131|ref|YP_001434927.1| - 2.9e-56 190.3 0.0 3.4e-56 190.1 0.0 1.0 1 0 0 1 1 1 1 Endonuclease V DUF99 PF01949.16 gi|156937131|ref|YP_001434927.1| - 0.015 14.7 0.1 0.021 14.2 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function DUF99 polyprenyl_synt PF00348.17 gi|156937132|ref|YP_001434928.1| - 4.1e-40 137.4 0.0 5.2e-40 137.1 0.0 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase Thioredoxin PF00085.20 gi|156937133|ref|YP_001434929.1| - 6.6e-10 38.9 0.0 8.5e-10 38.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|156937133|ref|YP_001434929.1| - 3.2e-06 27.6 0.2 6.8e-06 26.5 0.2 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 gi|156937133|ref|YP_001434929.1| - 0.00076 19.4 0.0 0.001 19.0 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 gi|156937133|ref|YP_001434929.1| - 0.0055 17.0 0.0 0.79 10.1 0.0 2.2 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_3 PF13192.6 gi|156937133|ref|YP_001434929.1| - 0.008 16.2 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin domain OST3_OST6 PF04756.13 gi|156937133|ref|YP_001434929.1| - 0.14 11.5 0.0 0.16 11.3 0.0 1.1 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Thioredoxin_9 PF14595.6 gi|156937133|ref|YP_001434929.1| - 0.15 11.8 0.0 0.17 11.6 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin CBS PF00571.28 gi|156937133|ref|YP_001434929.1| - 0.15 12.5 0.0 0.23 12.0 0.0 1.3 1 0 0 1 1 1 0 CBS domain Radical_SAM PF04055.21 gi|156937134|ref|YP_001434930.1| - 7e-12 46.0 0.0 3.1e-11 43.9 0.0 1.9 1 1 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|156937134|ref|YP_001434930.1| - 0.0043 17.3 0.0 0.095 13.0 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain PEPcase_2 PF14010.6 gi|156937135|ref|YP_001434931.1| - 1.1e-149 499.1 0.1 1.2e-149 499.0 0.1 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase PF00311.17 gi|156937135|ref|YP_001434931.1| - 0.00067 17.9 0.3 0.0022 16.1 0.0 1.9 3 0 0 3 3 3 1 Phosphoenolpyruvate carboxylase AvrE_T3Es PF11725.8 gi|156937135|ref|YP_001434931.1| - 0.014 12.7 0.0 0.018 12.3 0.0 1.0 1 0 0 1 1 1 0 AvrE-family Type-III effector proteins (T3Es) THUMP PF02926.17 gi|156937136|ref|YP_001434932.1| - 1.3e-11 44.7 1.8 1.3e-11 44.7 1.8 2.0 2 1 0 2 2 2 1 THUMP domain TFIIA_gamma_N PF02268.16 gi|156937136|ref|YP_001434932.1| - 0.00042 20.3 0.1 0.0038 17.2 0.1 2.1 2 0 0 2 2 2 1 Transcription initiation factor IIA, gamma subunit, helical domain Peptidase_M15_2 PF05951.13 gi|156937136|ref|YP_001434932.1| - 0.02 14.6 0.0 0.048 13.3 0.0 1.6 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF882) DUF3630 PF12305.8 gi|156937136|ref|YP_001434932.1| - 0.05 13.7 0.1 0.32 11.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3630) DUF2680 PF10925.8 gi|156937136|ref|YP_001434932.1| - 0.13 12.3 0.1 0.32 11.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2680) EVC2_like PF12297.8 gi|156937136|ref|YP_001434932.1| - 0.17 10.5 0.2 0.29 9.8 0.2 1.3 1 0 0 1 1 1 0 Ellis van Creveld protein 2 like protein Inositol_P PF00459.25 gi|156937137|ref|YP_001434933.1| - 2.1e-20 73.3 0.0 3.6e-20 72.6 0.0 1.3 1 1 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|156937137|ref|YP_001434933.1| - 0.02 14.4 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 Fructose-1-6-bisphosphatase, N-terminal domain B3_4 PF03483.17 gi|156937138|ref|YP_001434934.1| - 1.5e-27 96.4 0.0 2.3e-27 95.8 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain L_lactis_ph-MCP PF06673.11 gi|156937138|ref|YP_001434934.1| - 0.0031 16.6 0.1 0.0044 16.1 0.1 1.2 1 0 0 1 1 1 1 Lactococcus lactis bacteriophage major capsid protein Pyr_redox_2 PF07992.14 gi|156937139|ref|YP_001434935.1| - 6.7e-14 51.8 1.7 0.00011 21.5 0.1 3.2 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|156937139|ref|YP_001434935.1| - 1.2e-08 34.1 0.1 0.00035 19.4 0.1 2.2 2 0 0 2 2 2 2 HI0933-like protein GIDA PF01134.22 gi|156937139|ref|YP_001434935.1| - 8.5e-08 31.7 1.3 0.00016 20.9 0.0 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|156937139|ref|YP_001434935.1| - 1e-07 31.4 3.0 0.00012 21.3 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|156937139|ref|YP_001434935.1| - 2.8e-07 30.4 0.3 0.00047 19.9 0.1 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|156937139|ref|YP_001434935.1| - 8.2e-07 28.6 0.7 0.006 15.9 0.2 3.0 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|156937139|ref|YP_001434935.1| - 2.3e-05 23.8 0.1 3.8e-05 23.1 0.1 1.3 1 0 0 1 1 1 1 FAD binding domain Thi4 PF01946.17 gi|156937139|ref|YP_001434935.1| - 0.00037 19.8 0.1 0.0012 18.1 0.0 1.9 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|156937139|ref|YP_001434935.1| - 0.00076 19.7 0.3 0.0034 17.6 0.4 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 gi|156937139|ref|YP_001434935.1| - 0.0026 16.9 0.1 0.0038 16.3 0.1 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|156937139|ref|YP_001434935.1| - 0.0058 15.5 0.1 0.009 14.9 0.1 1.3 1 0 0 1 1 1 1 Tryptophan halogenase ThiF PF00899.21 gi|156937139|ref|YP_001434935.1| - 0.023 14.0 0.1 0.07 12.5 0.1 1.7 2 0 0 2 2 2 0 ThiF family Pyr_redox PF00070.27 gi|156937139|ref|YP_001434935.1| - 0.024 15.2 3.3 6.4 7.4 0.4 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|156937139|ref|YP_001434935.1| - 0.068 12.5 0.5 0.24 10.7 0.2 1.8 2 0 0 2 2 2 0 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|156937139|ref|YP_001434935.1| - 0.071 13.1 0.1 0.42 10.6 0.1 2.0 2 0 0 2 2 2 0 FAD-NAD(P)-binding DHHA2 PF02833.14 gi|156937139|ref|YP_001434935.1| - 0.11 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 DHHA2 domain Adenylsucc_synt PF00709.21 gi|156937140|ref|YP_001434936.1| - 6.6e-68 229.5 1.6 2.9e-33 115.4 0.1 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase Dehalogenase PF13486.6 gi|156937140|ref|YP_001434936.1| - 0.011 15.1 0.0 0.017 14.5 0.0 1.2 1 0 0 1 1 1 0 Reductive dehalogenase subunit tRNA-synt_1b PF00579.25 gi|156937141|ref|YP_001434937.1| - 5.1e-36 124.5 0.1 1e-34 120.2 0.1 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) MttA_Hcf106 PF02416.16 gi|156937142|ref|YP_001434938.1| - 2.9e-13 48.9 4.0 6.2e-13 47.9 4.0 1.8 1 1 0 1 1 1 1 mttA/Hcf106 family SAP PF02037.27 gi|156937142|ref|YP_001434938.1| - 0.013 15.2 1.0 0.03 14.1 1.0 1.7 1 1 0 1 1 1 0 SAP domain DUF4031 PF13223.6 gi|156937142|ref|YP_001434938.1| - 0.092 13.0 0.0 3 8.1 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF4031) SopE_GEF PF07487.13 gi|156937142|ref|YP_001434938.1| - 0.12 12.5 0.4 0.16 12.0 0.4 1.3 1 0 0 1 1 1 0 SopE GEF domain Pribosyltran PF00156.27 gi|156937143|ref|YP_001434939.1| - 4.8e-17 61.9 0.1 6.6e-17 61.5 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|156937143|ref|YP_001434939.1| - 0.023 14.1 0.1 0.066 12.6 0.1 1.6 1 1 1 2 2 2 0 Uracil phosphoribosyltransferase PNP_UDP_1 PF01048.20 gi|156937145|ref|YP_001434941.1| - 4.2e-42 144.0 0.6 5.1e-42 143.7 0.6 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Mrr_cat PF04471.12 gi|156937146|ref|YP_001434942.1| - 7.4e-06 26.0 0.0 1.1e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Restriction endonuclease NERD PF08378.11 gi|156937146|ref|YP_001434942.1| - 5.7e-05 23.5 0.0 0.00024 21.6 0.0 2.0 2 0 0 2 2 2 1 Nuclease-related domain UPF0102 PF02021.17 gi|156937146|ref|YP_001434942.1| - 0.00012 22.3 0.6 0.00017 21.7 0.2 1.5 2 0 0 2 2 2 1 Uncharacterised protein family UPF0102 Hjc PF01870.18 gi|156937146|ref|YP_001434942.1| - 0.0016 18.3 0.1 0.0027 17.7 0.1 1.4 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) YukD PF08817.10 gi|156937146|ref|YP_001434942.1| - 0.045 14.4 0.0 0.46 11.2 0.0 2.1 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein YukD MTES_1575 PF18741.1 gi|156937146|ref|YP_001434942.1| - 0.098 12.8 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 REase_MTES_1575 DUF3086 PF11285.8 gi|156937147|ref|YP_001434943.1| - 0.15 11.1 1.4 1 8.4 1.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF3086) SfsA PF03749.13 gi|156937148|ref|YP_001434944.1| - 1.6e-19 70.2 0.0 2.3e-19 69.6 0.0 1.2 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 gi|156937148|ref|YP_001434944.1| - 5.1e-11 42.6 0.0 1e-10 41.6 0.0 1.4 1 0 0 1 1 1 1 SfsA N-terminal OB domain HTH_10 PF04967.12 gi|156937148|ref|YP_001434944.1| - 0.021 14.6 0.0 0.037 13.8 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain cobW PF02492.19 gi|156937149|ref|YP_001434945.1| - 2.1e-25 89.3 0.0 2.6e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|156937149|ref|YP_001434945.1| - 3.8e-06 26.9 0.0 0.07 13.0 0.0 2.1 2 0 0 2 2 2 2 RsgA GTPase MeaB PF03308.16 gi|156937149|ref|YP_001434945.1| - 0.00018 20.6 0.0 0.17 10.9 0.0 2.1 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 gi|156937149|ref|YP_001434945.1| - 0.0045 17.4 0.0 0.013 16.0 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|156937149|ref|YP_001434945.1| - 0.01 16.0 0.0 0.015 15.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain IMPDH PF00478.25 gi|156937149|ref|YP_001434945.1| - 0.015 14.3 0.3 0.48 9.4 0.0 2.0 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain Zeta_toxin PF06414.12 gi|156937149|ref|YP_001434945.1| - 0.016 14.5 0.0 0.027 13.8 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin NTPase_1 PF03266.15 gi|156937149|ref|YP_001434945.1| - 0.03 14.2 0.3 0.42 10.5 0.0 2.4 1 1 1 2 2 2 0 NTPase AAA_16 PF13191.6 gi|156937149|ref|YP_001434945.1| - 0.039 14.3 0.0 0.058 13.8 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 gi|156937149|ref|YP_001434945.1| - 0.039 14.0 0.0 0.27 11.3 0.0 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase MobB PF03205.14 gi|156937149|ref|YP_001434945.1| - 0.045 13.6 0.0 0.09 12.7 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_5 PF07728.14 gi|156937149|ref|YP_001434945.1| - 0.049 13.6 0.0 0.14 12.2 0.0 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 gi|156937149|ref|YP_001434945.1| - 0.058 13.9 0.0 0.072 13.6 0.0 1.3 1 0 0 1 1 1 0 ABC transporter Roc PF08477.13 gi|156937149|ref|YP_001434945.1| - 0.059 13.6 0.0 0.33 11.2 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Pox_A32 PF04665.12 gi|156937149|ref|YP_001434945.1| - 0.061 12.8 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Poxvirus A32 protein ATPase_2 PF01637.18 gi|156937149|ref|YP_001434945.1| - 0.07 13.0 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea FeoB_N PF02421.18 gi|156937149|ref|YP_001434945.1| - 0.078 12.5 0.0 12 5.4 0.0 2.2 2 0 0 2 2 2 0 Ferrous iron transport protein B SRP54 PF00448.22 gi|156937149|ref|YP_001434945.1| - 0.089 12.4 0.0 0.62 9.6 0.0 2.1 1 1 0 1 1 1 0 SRP54-type protein, GTPase domain His_biosynth PF00977.21 gi|156937149|ref|YP_001434945.1| - 0.092 12.2 0.1 0.18 11.2 0.0 1.4 2 0 0 2 2 2 0 Histidine biosynthesis protein NACHT PF05729.12 gi|156937149|ref|YP_001434945.1| - 0.094 12.6 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 gi|156937149|ref|YP_001434945.1| - 0.1 12.9 0.0 0.28 11.5 0.0 1.8 2 1 1 3 3 2 0 AAA domain AAA_19 PF13245.6 gi|156937149|ref|YP_001434945.1| - 0.12 12.7 0.0 0.21 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|156937149|ref|YP_001434945.1| - 0.16 12.2 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|156937149|ref|YP_001434945.1| - 0.16 12.5 0.0 0.25 11.9 0.0 1.4 1 1 0 1 1 1 0 AAA domain DUF356 PF04009.12 gi|156937151|ref|YP_001434947.1| - 0.16 12.2 0.0 0.18 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF356) CxxCxxCC PF03692.15 gi|156937152|ref|YP_001434948.1| - 8.5e-09 36.0 0.1 1.3e-08 35.4 0.1 1.3 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain 5-FTHF_cyc-lig PF01812.20 gi|156937154|ref|YP_001434950.1| - 6.4e-29 101.1 0.0 8.1e-29 100.8 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family AbiEi_4 PF13338.6 gi|156937155|ref|YP_001434951.1| - 0.014 15.5 0.0 0.029 14.5 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_24 PF13412.6 gi|156937155|ref|YP_001434951.1| - 0.055 13.0 0.1 0.31 10.6 0.1 2.0 1 1 0 1 1 1 0 Winged helix-turn-helix DNA-binding Mrr_N PF14338.6 gi|156937155|ref|YP_001434951.1| - 0.11 12.6 0.0 0.81 9.9 0.0 2.1 1 1 0 1 1 1 0 Mrr N-terminal domain tRNA-synt_2b PF00587.25 gi|156937156|ref|YP_001434952.1| - 1.6e-24 86.9 0.0 2.3e-24 86.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|156937156|ref|YP_001434952.1| - 5.9e-21 74.4 3.4 7.4e-21 74.1 2.4 1.7 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|156937156|ref|YP_001434952.1| - 1.3e-13 50.9 0.7 3e-13 49.7 0.7 1.7 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal FBPase_3 PF01950.16 gi|156937157|ref|YP_001434953.1| - 4.4e-189 628.2 0.0 5e-189 628.0 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase ACD PF16671.5 gi|156937157|ref|YP_001434953.1| - 0.16 10.3 0.0 0.22 9.8 0.0 1.2 1 0 0 1 1 1 0 Actin cross-linking domain FlaC_arch PF05377.11 gi|156937158|ref|YP_001434954.1| - 1.1e-07 32.1 31.1 0.53 10.7 2.5 7.2 4 2 3 7 7 7 4 Flagella accessory protein C (FlaC) Baculo_PEP_C PF04513.12 gi|156937158|ref|YP_001434954.1| - 2e-06 27.9 35.4 0.00034 20.7 10.2 4.3 1 1 2 3 3 3 2 Baculovirus polyhedron envelope protein, PEP, C terminus IFT57 PF10498.9 gi|156937158|ref|YP_001434954.1| - 7.6e-06 25.1 36.1 3.6e-05 22.9 8.2 3.6 2 1 3 5 5 4 3 Intra-flagellar transport protein 57 Spc7 PF08317.11 gi|156937158|ref|YP_001434954.1| - 1.1e-05 24.5 43.1 0.0026 16.7 16.8 3.1 2 1 1 3 3 3 2 Spc7 kinetochore protein DUF1664 PF07889.12 gi|156937158|ref|YP_001434954.1| - 2.3e-05 24.4 27.4 0.0092 16.0 5.0 4.4 2 1 3 5 5 4 4 Protein of unknown function (DUF1664) DUF4407 PF14362.6 gi|156937158|ref|YP_001434954.1| - 4.3e-05 23.0 5.5 4.3e-05 23.0 5.5 2.9 2 1 1 3 3 3 2 Domain of unknown function (DUF4407) DUF713 PF05218.14 gi|156937158|ref|YP_001434954.1| - 7.6e-05 22.5 25.1 0.035 13.9 5.1 3.3 1 1 2 3 3 3 3 Protein of unknown function (DUF713) EzrA PF06160.12 gi|156937158|ref|YP_001434954.1| - 0.00014 20.2 35.5 0.0048 15.1 17.5 2.6 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA Tup_N PF08581.10 gi|156937158|ref|YP_001434954.1| - 0.00027 21.2 26.2 0.027 14.8 4.8 4.9 3 2 2 5 5 5 1 Tup N-terminal DUF3584 PF12128.8 gi|156937158|ref|YP_001434954.1| - 0.00028 18.6 32.6 0.00066 17.4 10.6 2.6 2 1 1 3 3 3 2 Protein of unknown function (DUF3584) SHE3 PF17078.5 gi|156937158|ref|YP_001434954.1| - 0.00034 20.4 14.1 0.00034 20.4 14.1 3.0 2 1 1 3 3 3 2 SWI5-dependent HO expression protein 3 Syntaxin PF00804.25 gi|156937158|ref|YP_001434954.1| - 0.0018 18.0 29.0 0.0059 16.3 4.9 3.7 3 1 1 4 4 3 3 Syntaxin HIP1_clath_bdg PF16515.5 gi|156937158|ref|YP_001434954.1| - 0.0068 17.0 6.2 0.0068 17.0 6.2 4.9 2 1 4 6 6 5 1 Clathrin-binding domain of Huntingtin-interacting protein 1 APG6_N PF17675.1 gi|156937158|ref|YP_001434954.1| - 0.0097 16.4 12.6 0.0097 16.4 12.6 4.8 2 1 3 5 5 5 2 Apg6 coiled-coil region Filament PF00038.21 gi|156937158|ref|YP_001434954.1| - 0.01 15.4 36.1 0.012 15.3 5.4 3.8 2 1 2 4 4 3 0 Intermediate filament protein DASH_Dam1 PF08653.10 gi|156937158|ref|YP_001434954.1| - 0.022 14.5 14.4 8 6.3 0.1 6.1 6 0 0 6 6 6 0 DASH complex subunit Dam1 WXG100 PF06013.12 gi|156937158|ref|YP_001434954.1| - 0.027 14.7 12.1 5.8 7.2 0.3 5.2 2 1 2 4 4 4 0 Proteins of 100 residues with WXG Erythro-docking PF09277.11 gi|156937158|ref|YP_001434954.1| - 0.035 14.0 0.0 1.8 8.5 0.0 3.2 2 0 0 2 2 2 0 Erythronolide synthase, docking COG2 PF06148.11 gi|156937158|ref|YP_001434954.1| - 0.036 14.1 24.4 6.4 6.9 1.1 5.3 1 1 3 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF948 PF06103.11 gi|156937158|ref|YP_001434954.1| - 0.037 14.3 24.1 0.071 13.4 2.3 5.2 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF948) APG17 PF04108.12 gi|156937158|ref|YP_001434954.1| - 0.066 12.3 27.5 0.072 12.2 4.3 3.3 1 1 2 3 3 3 0 Autophagy protein Apg17 WEMBL PF05701.11 gi|156937158|ref|YP_001434954.1| - 0.087 11.5 35.8 2.9 6.5 14.0 2.5 1 1 1 2 2 2 0 Weak chloroplast movement under blue light Fib_alpha PF08702.10 gi|156937158|ref|YP_001434954.1| - 0.098 12.8 27.5 0.38 10.9 7.4 3.7 1 1 1 3 3 3 0 Fibrinogen alpha/beta chain family Hydantoinase_A PF01968.18 gi|156937158|ref|YP_001434954.1| - 0.18 11.1 1.1 0.38 10.0 0.1 2.0 2 0 0 2 2 2 0 Hydantoinase/oxoprolinase Rbsn PF11464.8 gi|156937158|ref|YP_001434954.1| - 0.24 11.1 7.0 11 5.8 0.2 5.1 4 0 0 4 4 4 0 Rabenosyn Rab binding domain GCN5L1 PF06320.13 gi|156937158|ref|YP_001434954.1| - 0.26 11.4 17.9 1.1 9.5 1.5 4.3 1 1 3 5 5 5 0 GCN5-like protein 1 (GCN5L1) TraF_2 PF13729.6 gi|156937158|ref|YP_001434954.1| - 0.29 10.5 7.1 8.6 5.6 0.2 3.2 3 0 0 3 3 3 0 F plasmid transfer operon, TraF, protein PTPS PF01242.19 gi|156937158|ref|YP_001434954.1| - 0.32 11.0 1.7 0.96 9.4 0.4 2.4 2 0 0 2 2 2 0 6-pyruvoyl tetrahydropterin synthase DUF802 PF05650.11 gi|156937158|ref|YP_001434954.1| - 0.33 11.5 3.4 0.98 9.9 0.3 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF802) MscS_porin PF12795.7 gi|156937158|ref|YP_001434954.1| - 0.36 10.3 39.8 0.047 13.2 9.8 3.6 2 1 1 3 3 3 0 Mechanosensitive ion channel porin domain AAA_13 PF13166.6 gi|156937158|ref|YP_001434954.1| - 0.4 9.2 34.7 0.71 8.4 18.9 2.9 2 1 1 3 3 3 0 AAA domain DUF724 PF05266.14 gi|156937158|ref|YP_001434954.1| - 0.41 10.5 36.7 0.34 10.7 9.5 4.1 2 1 1 4 4 4 0 Protein of unknown function (DUF724) PMEI PF04043.15 gi|156937158|ref|YP_001434954.1| - 0.41 11.0 6.8 1.7 9.0 2.1 2.6 1 1 1 2 2 2 0 Plant invertase/pectin methylesterase inhibitor Mce4_CUP1 PF11887.8 gi|156937158|ref|YP_001434954.1| - 0.51 9.8 10.6 0.49 9.8 0.9 2.8 1 1 0 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative TPR_MLP1_2 PF07926.12 gi|156937158|ref|YP_001434954.1| - 0.6 10.2 47.6 2.1 8.4 14.8 5.5 2 1 3 5 5 5 0 TPR/MLP1/MLP2-like protein ApoO PF09769.9 gi|156937158|ref|YP_001434954.1| - 0.67 9.9 11.4 4.5 7.3 0.2 4.9 3 2 2 5 5 5 0 Apolipoprotein O CENP-F_leu_zip PF10473.9 gi|156937158|ref|YP_001434954.1| - 0.67 10.0 49.4 0.44 10.6 7.5 5.6 2 1 3 5 5 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Mating_N PF12731.7 gi|156937158|ref|YP_001434954.1| - 0.98 9.5 7.4 2.7 8.2 0.7 3.7 1 1 1 3 3 3 0 Mating-type protein beta 1 Spectrin PF00435.21 gi|156937158|ref|YP_001434954.1| - 1 9.9 31.4 0.18 12.3 3.7 5.3 2 1 2 5 5 5 0 Spectrin repeat Prp19 PF08606.11 gi|156937158|ref|YP_001434954.1| - 1.3 9.1 10.5 4.8 7.2 0.3 4.3 3 2 0 3 3 3 0 Prp19/Pso4-like Med9 PF07544.13 gi|156937158|ref|YP_001434954.1| - 1.6 8.9 25.1 0.38 10.9 2.8 5.0 3 2 2 5 5 5 0 RNA polymerase II transcription mediator complex subunit 9 TolA_bind_tri PF16331.5 gi|156937158|ref|YP_001434954.1| - 1.9 8.6 16.7 4.7 7.4 1.7 4.8 3 2 0 4 4 3 0 TolA binding protein trimerisation Bcr-Abl_Oligo PF09036.10 gi|156937158|ref|YP_001434954.1| - 2.3 8.3 10.0 24 5.0 0.1 4.9 2 2 4 6 6 6 0 Bcr-Abl oncoprotein oligomerisation domain DUF4530 PF15039.6 gi|156937158|ref|YP_001434954.1| - 2.3 8.4 8.3 2.4 8.3 0.5 3.6 2 1 0 3 3 3 0 Domain of unknown function (DUF4530) Bacillus_HBL PF05791.11 gi|156937158|ref|YP_001434954.1| - 2.6 7.9 26.1 2.4 8.0 6.0 3.9 1 1 3 4 4 4 0 Bacillus haemolytic enterotoxin (HBL) LANC_like PF05147.13 gi|156937158|ref|YP_001434954.1| - 3 6.3 6.0 0.43 9.1 1.7 1.7 2 0 0 2 2 2 0 Lanthionine synthetase C-like protein HTH_37 PF13744.6 gi|156937158|ref|YP_001434954.1| - 3.4 7.7 10.7 5.9 6.9 0.7 4.1 3 1 0 3 3 3 0 Helix-turn-helix domain DUF1515 PF07439.11 gi|156937158|ref|YP_001434954.1| - 3.5 7.7 11.1 30 4.7 0.2 4.4 1 1 3 4 4 4 0 Protein of unknown function (DUF1515) NPV_P10 PF05531.12 gi|156937158|ref|YP_001434954.1| - 4 8.0 26.0 1.5 9.3 0.4 5.7 2 1 4 6 6 5 0 Nucleopolyhedrovirus P10 protein CorA PF01544.18 gi|156937158|ref|YP_001434954.1| - 4.1 6.6 24.3 1.4 8.2 7.0 3.1 1 1 2 3 3 3 0 CorA-like Mg2+ transporter protein TMPIT PF07851.13 gi|156937158|ref|YP_001434954.1| - 4.9 6.3 32.1 2.2 7.5 3.2 4.0 2 1 2 4 4 4 0 TMPIT-like protein Leu_zip PF15294.6 gi|156937158|ref|YP_001434954.1| - 6.2 6.3 43.3 0.87 9.0 13.0 3.6 2 1 2 4 4 3 0 Leucine zipper HMMR_N PF15905.5 gi|156937158|ref|YP_001434954.1| - 7 6.0 49.2 0.24 10.8 20.8 2.9 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal DUF2258 PF10015.9 gi|156937158|ref|YP_001434954.1| - 7.5 6.8 10.0 4.6 7.4 0.1 3.8 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2258) Seryl_tRNA_N PF02403.22 gi|156937158|ref|YP_001434954.1| - 8.7 6.6 43.8 0.62 10.3 4.1 5.5 2 1 3 5 5 5 0 Seryl-tRNA synthetase N-terminal domain DUF2730 PF10805.8 gi|156937158|ref|YP_001434954.1| - 8.9 6.5 28.9 3.2 7.9 2.3 5.3 2 1 5 7 7 6 0 Protein of unknown function (DUF2730) GIT_CC PF16559.5 gi|156937158|ref|YP_001434954.1| - 8.9 6.3 19.6 0.054 13.4 1.1 4.3 4 1 0 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor Lectin_N PF03954.14 gi|156937158|ref|YP_001434954.1| - 9.4 6.0 28.0 0.53 10.0 1.7 4.2 1 1 1 3 3 3 0 Hepatic lectin, N-terminal domain Cep57_MT_bd PF06657.13 gi|156937158|ref|YP_001434954.1| - 9.6 6.7 20.8 1.5 9.4 0.3 4.9 3 2 2 5 5 4 0 Centrosome microtubule-binding domain of Cep57 Dimer_Tnp_Tn5 PF02281.16 gi|156937159|ref|YP_001434955.1| - 0.036 13.8 0.0 0.062 13.0 0.0 1.4 1 0 0 1 1 1 0 Transposase Tn5 dimerisation domain TPPII_N PF12583.8 gi|156937159|ref|YP_001434955.1| - 0.11 13.0 0.5 23 5.5 0.3 2.2 2 0 0 2 2 2 0 Tripeptidyl peptidase II N terminal RNA_POL_M_15KD PF02150.16 gi|156937160|ref|YP_001434956.1| - 6.9e-07 29.0 0.4 1e-06 28.5 0.4 1.3 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit zf-TFIIB PF13453.6 gi|156937160|ref|YP_001434956.1| - 0.0008 18.7 1.6 0.0012 18.1 1.6 1.3 1 0 0 1 1 1 1 Transcription factor zinc-finger zf-ribbon_3 PF13248.6 gi|156937160|ref|YP_001434956.1| - 0.0024 17.2 1.0 1 8.9 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|156937160|ref|YP_001434956.1| - 0.0028 17.3 5.2 0.24 11.2 0.4 2.3 2 0 0 2 2 2 2 zinc-ribbon domain CpXC PF14353.6 gi|156937160|ref|YP_001434956.1| - 0.0031 17.6 2.6 0.0049 16.9 0.1 1.9 1 1 1 2 2 2 1 CpXC protein DZR PF12773.7 gi|156937160|ref|YP_001434956.1| - 0.0033 17.4 0.7 0.0053 16.7 0.7 1.3 1 0 0 1 1 1 1 Double zinc ribbon IBR PF01485.21 gi|156937160|ref|YP_001434956.1| - 0.0041 17.3 0.6 0.0079 16.4 0.6 1.5 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain zf-C4_Topoisom PF01396.19 gi|156937160|ref|YP_001434956.1| - 0.0056 16.4 3.1 0.41 10.5 0.2 2.2 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger zinc-ribbons_6 PF07191.12 gi|156937160|ref|YP_001434956.1| - 0.0059 16.6 1.2 0.041 13.9 1.2 2.0 1 1 0 1 1 1 1 zinc-ribbons C1_1 PF00130.22 gi|156937160|ref|YP_001434956.1| - 0.01 15.7 0.2 0.014 15.3 0.2 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HscB_4_cys PF18256.1 gi|156937160|ref|YP_001434956.1| - 0.012 15.4 0.4 0.23 11.3 0.1 2.2 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif zf-ISL3 PF14690.6 gi|156937160|ref|YP_001434956.1| - 0.014 16.0 3.7 1.7 9.4 0.3 2.3 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF2387 PF09526.10 gi|156937160|ref|YP_001434956.1| - 0.022 14.9 1.7 0.029 14.5 1.7 1.3 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) Thioredoxin_2 PF13098.6 gi|156937160|ref|YP_001434956.1| - 0.024 15.1 0.4 0.029 14.8 0.4 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain Zn_Tnp_IS1 PF03811.13 gi|156937160|ref|YP_001434956.1| - 0.025 14.3 2.7 0.8 9.5 0.1 2.2 1 1 1 2 2 2 0 InsA N-terminal domain zf-Mss51 PF13824.6 gi|156937160|ref|YP_001434956.1| - 0.044 13.9 1.5 0.092 12.9 0.5 1.9 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-FPG_IleRS PF06827.14 gi|156937160|ref|YP_001434956.1| - 0.049 13.5 1.5 3.1 7.7 0.3 2.6 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Hormone_6 PF00236.18 gi|156937160|ref|YP_001434956.1| - 0.049 13.6 0.8 0.056 13.4 0.8 1.1 1 0 0 1 1 1 0 Glycoprotein hormone zf_UBZ PF18439.1 gi|156937160|ref|YP_001434956.1| - 0.051 13.2 1.4 8.4 6.1 0.2 2.4 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger YacG PF03884.14 gi|156937160|ref|YP_001434956.1| - 0.052 13.3 1.4 1.3 8.8 0.1 2.4 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG Peptidase_M24_C PF16188.5 gi|156937160|ref|YP_001434956.1| - 0.053 13.6 0.5 0.72 10.0 0.1 2.1 2 0 0 2 2 2 0 C-terminal region of peptidase_M24 Zn-ribbon_8 PF09723.10 gi|156937160|ref|YP_001434956.1| - 0.098 12.8 3.0 5.1 7.3 0.2 2.2 1 1 0 2 2 2 0 Zinc ribbon domain zf-ACC PF17848.1 gi|156937160|ref|YP_001434956.1| - 0.1 12.7 2.0 9.6 6.4 0.1 2.5 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain FYDLN_acid PF09538.10 gi|156937160|ref|YP_001434956.1| - 0.1 13.3 3.2 0.56 10.9 3.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (FYDLN_acid) TF_Zn_Ribbon PF08271.12 gi|156937160|ref|YP_001434956.1| - 0.11 12.1 1.9 0.26 10.9 1.9 1.8 1 1 0 1 1 1 0 TFIIB zinc-binding zf-RING_7 PF02591.15 gi|156937160|ref|YP_001434956.1| - 0.12 12.6 1.6 3.7 7.8 0.1 2.4 1 1 1 2 2 2 0 C4-type zinc ribbon domain UPF0547 PF10571.9 gi|156937160|ref|YP_001434956.1| - 0.13 12.3 2.8 1.1 9.4 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.6 gi|156937160|ref|YP_001434956.1| - 0.16 11.9 2.1 4.5 7.3 2.2 2.3 1 1 1 2 2 2 0 Nudix N-terminal zf-LITAF-like PF10601.9 gi|156937160|ref|YP_001434956.1| - 0.17 12.2 2.1 8.6 6.7 0.1 2.3 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain Mu-like_Com PF10122.9 gi|156937160|ref|YP_001434956.1| - 0.18 11.3 3.3 1 8.9 3.3 2.1 1 1 0 1 1 1 0 Mu-like prophage protein Com PhnA_Zn_Ribbon PF08274.12 gi|156937160|ref|YP_001434956.1| - 0.18 11.8 1.5 1.7 8.7 1.5 2.1 1 1 0 1 1 1 0 PhnA Zinc-Ribbon zinc_ribbon_4 PF13717.6 gi|156937160|ref|YP_001434956.1| - 0.25 11.3 5.1 1.6 8.7 5.1 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Tmemb_55A PF09788.9 gi|156937160|ref|YP_001434956.1| - 0.25 10.4 2.8 0.27 10.3 2.8 1.2 1 0 0 1 1 1 0 Transmembrane protein 55A Zn_Tnp_IS1595 PF12760.7 gi|156937160|ref|YP_001434956.1| - 0.27 11.2 4.2 0.49 10.4 1.0 2.1 1 1 0 1 1 1 0 Transposase zinc-ribbon domain DUF1451 PF07295.11 gi|156937160|ref|YP_001434956.1| - 0.62 10.1 0.0 0.62 10.1 0.0 2.6 1 1 2 3 3 3 0 Zinc-ribbon containing domain Lar_restr_allev PF14354.6 gi|156937160|ref|YP_001434956.1| - 0.69 10.3 3.4 2.7 8.5 3.4 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar DNA_ligase_ZBD PF03119.16 gi|156937160|ref|YP_001434956.1| - 0.94 9.6 9.2 0.89 9.6 3.8 3.1 2 1 1 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain zf-NADH-PPase PF09297.11 gi|156937160|ref|YP_001434956.1| - 1.1 9.0 4.3 9.2 6.0 0.2 2.2 1 1 1 2 2 2 0 NADH pyrophosphatase zinc ribbon domain VP_N-CPKC PF11475.8 gi|156937160|ref|YP_001434956.1| - 1.1 9.3 3.4 1.4 8.9 0.2 2.3 2 0 0 2 2 2 0 Virion protein N terminal domain Cys_rich_KTR PF14205.6 gi|156937160|ref|YP_001434956.1| - 1.1 9.1 6.9 1.1 9.2 1.6 2.4 1 1 1 2 2 2 0 Cysteine-rich KTR zf_C2H2_10 PF18414.1 gi|156937160|ref|YP_001434956.1| - 1.4 8.5 5.2 13 5.4 0.6 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger Radical_SAM PF04055.21 gi|156937162|ref|YP_001434958.1| - 7.8e-27 94.7 0.0 7.7e-26 91.5 0.0 2.3 3 0 0 3 3 3 1 Radical SAM superfamily B12-binding PF02310.19 gi|156937162|ref|YP_001434958.1| - 2.2e-10 40.6 0.0 1.7e-09 37.8 0.0 2.2 2 0 0 2 2 2 1 B12 binding domain MAP70 PF07058.11 gi|156937162|ref|YP_001434958.1| - 0.2 10.3 0.0 0.28 9.9 0.0 1.1 1 0 0 1 1 1 0 Microtubule-associated protein 70 CLP1_P PF16575.5 gi|156937163|ref|YP_001434959.1| - 5.9e-25 88.2 0.0 1.1e-24 87.3 0.0 1.5 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop CbiA PF01656.23 gi|156937163|ref|YP_001434959.1| - 4.7e-05 23.4 0.0 0.00019 21.5 0.0 2.0 2 1 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain DUF2341 PF10102.9 gi|156937164|ref|YP_001434960.1| - 2.4e-06 28.0 0.0 1.3e-05 25.7 0.0 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF2341) Pur_DNA_glyco PF02245.16 gi|156937166|ref|YP_001434962.1| - 0.0016 17.9 0.1 0.0025 17.3 0.1 1.3 1 0 0 1 1 1 1 Methylpurine-DNA glycosylase (MPG) Sua5_yciO_yrdC PF01300.18 gi|156937167|ref|YP_001434963.1| - 1.4e-43 148.5 0.0 1.7e-43 148.2 0.0 1.1 1 0 0 1 1 1 1 Telomere recombination TatC PF00902.18 gi|156937168|ref|YP_001434964.1| - 6.3e-40 137.2 21.7 7.7e-40 136.9 21.7 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) NTPase_I-T PF01931.18 gi|156937169|ref|YP_001434965.1| - 3.7e-41 140.6 0.0 4.2e-41 140.5 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 DUF2007 PF09413.10 gi|156937169|ref|YP_001434965.1| - 0.068 13.3 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Putative prokaryotic signal transducing protein ACP_syn_III_C PF08541.10 gi|156937170|ref|YP_001434966.1| - 1.5e-15 57.2 0.0 8.4e-15 54.7 0.0 2.1 2 1 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACP_syn_III PF08545.10 gi|156937170|ref|YP_001434966.1| - 0.0042 16.9 2.5 0.0062 16.4 0.8 2.1 2 1 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HMG_CoA_synt_C PF08540.10 gi|156937170|ref|YP_001434966.1| - 0.005 16.5 0.0 0.0067 16.1 0.0 1.2 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A synthase C terminal Thiolase_N PF00108.23 gi|156937170|ref|YP_001434966.1| - 0.023 14.1 0.2 0.08 12.3 0.3 1.8 2 0 0 2 2 2 0 Thiolase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|156937170|ref|YP_001434966.1| - 0.047 13.7 0.0 26 4.9 0.0 3.1 2 1 0 2 2 2 0 Beta-ketoacyl synthase, C-terminal domain Thiolase_N PF00108.23 gi|156937171|ref|YP_001434967.1| - 2.3e-09 37.0 0.1 6.1e-09 35.6 0.1 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 gi|156937171|ref|YP_001434967.1| - 2.9e-05 23.8 0.7 0.022 14.6 0.0 2.7 3 0 0 3 3 3 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_C PF02803.18 gi|156937171|ref|YP_001434967.1| - 4.8e-05 23.0 0.3 0.00012 21.7 0.1 1.8 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|156937171|ref|YP_001434967.1| - 0.0001 22.0 0.0 0.0003 20.5 0.0 1.7 2 0 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain OB_aCoA_assoc PF01796.17 gi|156937172|ref|YP_001434968.1| - 1.9e-12 47.0 0.0 2.7e-12 46.5 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|156937172|ref|YP_001434968.1| - 2.1e-06 27.5 5.3 3.3e-06 26.9 5.3 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.6 gi|156937172|ref|YP_001434968.1| - 2.7e-05 23.4 0.6 4.1e-05 22.8 0.6 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|156937172|ref|YP_001434968.1| - 0.00094 19.9 0.5 0.0015 19.3 0.5 1.3 1 0 0 1 1 1 1 zinc-ribbon family DZR PF12773.7 gi|156937172|ref|YP_001434968.1| - 0.0022 18.0 0.5 0.0034 17.4 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|156937172|ref|YP_001434968.1| - 0.034 14.3 0.7 0.056 13.6 0.7 1.3 1 0 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like Prok-RING_1 PF14446.6 gi|156937172|ref|YP_001434968.1| - 0.038 13.9 1.2 0.063 13.2 1.2 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 zf-TFIIB PF13453.6 gi|156937172|ref|YP_001434968.1| - 0.057 12.8 1.0 7.4 6.0 0.1 2.4 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-NADH-PPase PF09297.11 gi|156937172|ref|YP_001434968.1| - 0.059 13.0 4.1 2.2 8.0 0.3 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain NRDD PF13597.6 gi|156937172|ref|YP_001434968.1| - 0.26 10.0 0.8 0.34 9.6 0.8 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase Zn-ribbon_8 PF09723.10 gi|156937172|ref|YP_001434968.1| - 0.49 10.6 8.4 1.3 9.2 8.4 1.8 1 1 0 1 1 1 0 Zinc ribbon domain RecR PF02132.15 gi|156937172|ref|YP_001434968.1| - 0.54 9.9 5.6 0.5 10.0 0.3 2.5 2 1 1 3 3 3 0 RecR protein zinc_ribbon_2 PF13240.6 gi|156937172|ref|YP_001434968.1| - 0.56 10.0 3.6 1.3 8.9 3.6 1.6 1 1 0 1 1 1 0 zinc-ribbon domain DNA_ligase_ZBD PF03119.16 gi|156937172|ref|YP_001434968.1| - 0.62 10.1 7.7 1.1 9.3 2.9 2.7 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_Tnp_IS1595 PF12760.7 gi|156937172|ref|YP_001434968.1| - 0.72 9.9 7.9 1.6 8.8 0.9 2.3 1 1 1 2 2 2 0 Transposase zinc-ribbon domain HypA PF01155.19 gi|156937172|ref|YP_001434968.1| - 1.1 9.3 4.3 0.45 10.5 1.5 1.7 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-RING_7 PF02591.15 gi|156937172|ref|YP_001434968.1| - 6.6 7.0 9.8 11 6.3 1.3 3.0 3 1 0 3 3 3 0 C4-type zinc ribbon domain AMP-binding PF00501.28 gi|156937173|ref|YP_001434969.1| - 3.8e-79 266.3 0.0 4.5e-79 266.0 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|156937173|ref|YP_001434969.1| - 2.5e-10 41.2 2.3 8.9e-10 39.4 1.8 2.3 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain Ub-Mut7C PF14451.6 gi|156937173|ref|YP_001434969.1| - 0.13 12.1 0.1 0.13 12.1 0.1 1.9 2 0 0 2 2 2 0 Mut7-C ubiquitin EamA PF00892.20 gi|156937175|ref|YP_001434971.1| - 2.7e-33 115.0 39.3 2.2e-20 73.3 14.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|156937175|ref|YP_001434971.1| - 1.4e-05 24.6 5.9 9.2e-05 21.9 5.5 2.0 1 1 0 1 1 1 1 Triose-phosphate Transporter family PUNUT PF16913.5 gi|156937175|ref|YP_001434971.1| - 0.0032 16.7 2.9 0.0032 16.7 2.9 2.4 1 1 1 2 2 2 1 Purine nucleobase transmembrane transport DUF424 PF04242.13 gi|156937176|ref|YP_001434972.1| - 3e-24 85.1 0.2 3.4e-24 84.9 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) 2-Hacid_dh_C PF02826.19 gi|156937177|ref|YP_001434973.1| - 2.6e-60 202.8 0.0 4e-60 202.2 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|156937177|ref|YP_001434973.1| - 1.7e-36 124.9 0.0 2.9e-36 124.1 0.0 1.3 1 1 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NAD_binding_2 PF03446.15 gi|156937177|ref|YP_001434973.1| - 6.3e-09 36.2 1.5 1.2e-08 35.3 0.2 2.0 2 1 1 3 3 3 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|156937177|ref|YP_001434973.1| - 1.3e-07 31.3 2.3 6.5e-06 25.8 0.1 3.0 2 1 1 3 3 3 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AdoHcyase_NAD PF00670.21 gi|156937177|ref|YP_001434973.1| - 2e-07 31.2 0.3 6.9e-07 29.5 0.0 1.8 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain F420_oxidored PF03807.17 gi|156937177|ref|YP_001434973.1| - 3.2e-05 24.4 1.4 8e-05 23.1 0.1 2.2 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent AlaDh_PNT_C PF01262.21 gi|156937177|ref|YP_001434973.1| - 0.00021 20.6 1.3 0.00039 19.8 0.4 1.8 1 1 1 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|156937177|ref|YP_001434973.1| - 0.0015 18.8 0.9 0.31 11.3 0.0 2.8 2 0 0 2 2 2 1 TrkA-N domain DapB_N PF01113.20 gi|156937177|ref|YP_001434973.1| - 0.0021 18.2 0.7 0.0094 16.1 0.1 2.3 2 1 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus GFO_IDH_MocA PF01408.22 gi|156937177|ref|YP_001434973.1| - 0.005 17.6 0.0 0.038 14.8 0.0 2.4 3 0 0 3 3 2 1 Oxidoreductase family, NAD-binding Rossmann fold DpaA_N PF16924.5 gi|156937177|ref|YP_001434973.1| - 0.0093 16.0 0.1 0.065 13.3 0.0 2.4 3 0 0 3 3 3 1 Dipicolinate synthase subunit A N-terminal domain XdhC_C PF13478.6 gi|156937177|ref|YP_001434973.1| - 0.013 16.0 0.4 0.35 11.4 0.0 3.0 3 1 0 3 3 3 0 XdhC Rossmann domain ELFV_dehydrog PF00208.21 gi|156937177|ref|YP_001434973.1| - 0.019 14.7 0.2 0.045 13.5 0.2 1.6 1 1 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Pyr_redox_2 PF07992.14 gi|156937177|ref|YP_001434973.1| - 0.019 14.2 0.4 0.081 12.1 0.1 1.9 1 1 1 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Mur_ligase PF01225.25 gi|156937177|ref|YP_001434973.1| - 0.021 15.1 0.4 0.48 10.8 0.2 2.8 2 1 0 2 2 2 0 Mur ligase family, catalytic domain Gp_dh_N PF00044.24 gi|156937177|ref|YP_001434973.1| - 0.023 15.0 0.1 0.056 13.8 0.1 1.8 1 0 0 1 1 1 0 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|156937177|ref|YP_001434973.1| - 0.035 14.0 2.7 0.052 13.4 0.5 2.2 2 1 1 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox PF00070.27 gi|156937177|ref|YP_001434973.1| - 0.04 14.5 1.3 0.91 10.1 0.1 3.0 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_7 PF13241.6 gi|156937177|ref|YP_001434973.1| - 0.044 14.2 0.4 1.2 9.6 0.1 2.4 2 0 0 2 2 2 0 Putative NAD(P)-binding ADH_zinc_N PF00107.26 gi|156937177|ref|YP_001434973.1| - 0.085 12.8 0.5 0.48 10.4 0.0 2.5 2 2 0 2 2 2 0 Zinc-binding dehydrogenase MazG-like PF12643.7 gi|156937177|ref|YP_001434973.1| - 0.09 13.0 0.1 0.96 9.8 0.0 2.7 3 0 0 3 3 2 0 MazG-like family SASP PF00269.20 gi|156937177|ref|YP_001434973.1| - 0.1 12.6 0.1 5.7 7.0 0.0 2.6 2 0 0 2 2 2 0 Small, acid-soluble spore proteins, alpha/beta type SIS_2 PF13580.6 gi|156937177|ref|YP_001434973.1| - 0.12 12.4 1.2 10 6.2 0.0 2.9 2 1 1 3 3 3 0 SIS domain Nitro_FeMo-Co PF02579.17 gi|156937177|ref|YP_001434973.1| - 0.44 10.9 2.1 51 4.3 0.1 3.4 3 1 0 3 3 3 0 Dinitrogenase iron-molybdenum cofactor Histidinol_dh PF00815.20 gi|156937178|ref|YP_001434974.1| - 8.3e-94 314.9 0.6 1.8e-93 313.8 0.6 1.5 1 1 0 1 1 1 1 Histidinol dehydrogenase ATP-grasp_5 PF13549.6 gi|156937179|ref|YP_001434975.1| - 6.6e-21 74.8 0.1 1.6e-20 73.5 0.1 1.7 1 1 0 1 1 1 1 ATP-grasp domain RPAP1_N PF08621.10 gi|156937179|ref|YP_001434975.1| - 0.069 12.9 0.5 0.069 12.9 0.5 1.9 2 0 0 2 2 2 0 RPAP1-like, N-terminal TRCF PF03461.15 gi|156937179|ref|YP_001434975.1| - 0.11 12.9 0.1 0.19 12.1 0.1 1.3 1 0 0 1 1 1 0 TRCF domain RRN3 PF05327.11 gi|156937179|ref|YP_001434975.1| - 0.21 10.1 0.0 0.32 9.5 0.0 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Succ_CoA_lig PF13607.6 gi|156937180|ref|YP_001434976.1| - 1.7e-28 99.1 0.1 4.4e-28 97.8 0.1 1.7 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|156937180|ref|YP_001434976.1| - 5e-26 91.5 0.3 2.5e-25 89.2 0.3 2.1 2 0 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 gi|156937180|ref|YP_001434976.1| - 1.1e-15 58.1 0.0 9e-15 55.1 0.1 2.1 2 0 0 2 2 2 1 CoA binding domain NAD_Gly3P_dh_N PF01210.23 gi|156937180|ref|YP_001434976.1| - 0.0086 16.1 0.0 0.019 15.0 0.0 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFO_IDH_MocA PF01408.22 gi|156937180|ref|YP_001434976.1| - 0.087 13.6 0.0 0.21 12.4 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Ribosomal_L13e PF01294.18 gi|156937181|ref|YP_001434977.1| - 2e-12 47.3 0.1 2.6e-12 47.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L13e Flavoprotein PF02441.19 gi|156937182|ref|YP_001434978.1| - 1.7e-22 79.8 0.0 2.4e-22 79.4 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein ORF_12_N PF18042.1 gi|156937184|ref|YP_001434980.1| - 0.02 15.3 0.0 0.05 14.0 0.0 1.6 1 0 0 1 1 1 0 ORF 12 gene product N-terminal MFS_1 PF07690.16 gi|156937185|ref|YP_001434981.1| - 1.2e-34 119.8 52.3 1.9e-24 86.3 26.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|156937185|ref|YP_001434981.1| - 1.6e-08 33.8 28.1 0.00028 19.9 9.2 2.5 1 1 1 2 2 2 2 MFS_1 like family MFS_4 PF06779.14 gi|156937185|ref|YP_001434981.1| - 0.016 14.5 24.7 0.11 11.8 24.3 2.0 1 1 0 1 1 1 0 Uncharacterised MFS-type transporter YbfB Phtf-FEM1B_bdg PF12129.8 gi|156937185|ref|YP_001434981.1| - 0.1 12.4 0.4 0.29 10.9 0.4 1.9 1 0 0 1 1 1 0 Male germ-cell putative homeodomain transcription factor Pam17 PF08566.10 gi|156937185|ref|YP_001434981.1| - 0.71 9.7 1.8 5.3 6.9 0.1 2.7 2 0 0 2 2 2 0 Mitochondrial import protein Pam17 Pantoate_transf PF02548.15 gi|156937186|ref|YP_001434982.1| - 4.3e-117 390.1 0.7 4.9e-117 389.9 0.7 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|156937186|ref|YP_001434982.1| - 2.7e-09 36.8 1.6 6.3e-09 35.6 0.3 1.9 2 0 0 2 2 2 1 Phosphoenolpyruvate phosphomutase RtcB PF01139.17 gi|156937187|ref|YP_001434983.1| - 1.3e-172 574.7 0.0 1.4e-172 574.5 0.0 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Na_H_Exchanger PF00999.21 gi|156937188|ref|YP_001434984.1| - 4.8e-17 61.8 32.9 7.1e-17 61.3 32.9 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.28 gi|156937188|ref|YP_001434984.1| - 0.046 14.2 0.1 0.14 12.6 0.0 1.9 2 0 0 2 2 2 0 CBS domain DJ-1_PfpI PF01965.24 gi|156937189|ref|YP_001434985.1| - 4.5e-44 150.2 0.0 5.2e-44 150.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family Catalase_C PF18011.1 gi|156937189|ref|YP_001434985.1| - 0.00013 21.6 0.0 0.0002 21.0 0.0 1.3 1 0 0 1 1 1 1 C-terminal domain found in long catalases GATase PF00117.28 gi|156937189|ref|YP_001434985.1| - 0.00015 21.6 0.0 0.00017 21.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|156937189|ref|YP_001434985.1| - 0.00067 19.3 0.0 0.00083 19.0 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain ThiJ_like PF17124.5 gi|156937189|ref|YP_001434985.1| - 0.0065 16.2 0.1 2.9 7.5 0.0 2.4 1 1 1 2 2 2 2 ThiJ/PfpI family-like HupF_HypC PF01455.18 gi|156937189|ref|YP_001434985.1| - 0.027 14.6 0.1 7.1 6.9 0.1 2.3 2 0 0 2 2 2 0 HupF/HypC family GATase_5 PF13507.6 gi|156937189|ref|YP_001434985.1| - 0.18 10.9 0.0 0.24 10.5 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain tRNA-Thr_ED PF08915.11 gi|156937190|ref|YP_001434986.1| - 7.9e-43 145.8 0.0 8.7e-43 145.7 0.0 1.0 1 0 0 1 1 1 1 Archaea-specific editing domain of threonyl-tRNA synthetase PGM_PMM_II PF02879.16 gi|156937190|ref|YP_001434986.1| - 0.22 12.2 0.0 0.54 10.9 0.0 1.7 1 1 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Radical_SAM PF04055.21 gi|156937191|ref|YP_001434987.1| - 2.1e-14 54.3 0.1 7.1e-14 52.5 0.1 1.8 1 1 0 1 1 1 1 Radical SAM superfamily SPASM PF13186.6 gi|156937191|ref|YP_001434987.1| - 2e-09 37.8 0.0 4.6e-09 36.7 0.0 1.6 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|156937191|ref|YP_001434987.1| - 0.033 14.5 0.0 0.053 13.8 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain Dioxygenase_N PF04444.14 gi|156937191|ref|YP_001434987.1| - 0.071 13.0 0.0 0.51 10.2 0.0 2.2 2 0 0 2 2 2 0 Catechol dioxygenase N terminus Amidohydro_1 PF01979.20 gi|156937192|ref|YP_001434988.1| - 1.9e-09 37.3 0.3 1.5e-07 31.1 0.3 2.4 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|156937192|ref|YP_001434988.1| - 2.8e-06 27.1 0.1 0.00022 20.8 0.0 2.4 3 0 0 3 3 3 2 Amidohydrolase family Hexapep PF00132.24 gi|156937193|ref|YP_001434989.1| - 4.8e-06 26.1 0.0 0.087 12.6 0.1 2.6 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) Lyase_1 PF00206.20 gi|156937194|ref|YP_001434990.1| - 2.1e-47 162.0 0.0 4e-47 161.1 0.0 1.3 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|156937194|ref|YP_001434990.1| - 9.2e-13 48.6 0.2 9.2e-13 48.6 0.2 3.4 4 0 0 4 4 4 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|156937194|ref|YP_001434990.1| - 4e-07 30.1 1.6 4.3e-06 26.8 0.1 3.1 3 1 1 4 4 4 1 Adenylosuccinate lyase C-terminal Glycos_trans_3N PF02885.17 gi|156937194|ref|YP_001434990.1| - 0.07 13.0 0.0 0.59 10.0 0.0 2.6 2 0 0 2 2 2 0 Glycosyl transferase family, helical bundle domain Ribosomal_60s PF00428.19 gi|156937194|ref|YP_001434990.1| - 0.3 11.7 3.1 2.5 8.7 0.1 3.3 4 0 0 4 4 4 0 60s Acidic ribosomal protein CutA1 PF03091.15 gi|156937195|ref|YP_001434991.1| - 1.2e-33 114.9 0.7 1.4e-33 114.7 0.7 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein SPOR PF05036.13 gi|156937195|ref|YP_001434991.1| - 0.086 13.2 0.0 0.31 11.5 0.0 1.9 1 1 0 1 1 1 0 Sporulation related domain DAHP_snth_FXD PF18152.1 gi|156937195|ref|YP_001434991.1| - 0.17 11.8 0.1 0.59 10.0 0.0 1.8 2 0 0 2 2 2 0 DAHP synthase ferredoxin-like domain Glu-tRNAGln PF02686.15 gi|156937196|ref|YP_001434992.1| - 1.6e-09 37.9 0.6 2.1e-09 37.5 0.6 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit ATP_transf PF09830.9 gi|156937196|ref|YP_001434992.1| - 0.065 13.4 0.1 0.84 9.8 0.0 2.1 2 0 0 2 2 2 0 ATP adenylyltransferase NurA PF09376.10 gi|156937197|ref|YP_001434993.1| - 1.1e-07 31.8 0.0 1.9e-07 31.0 0.0 1.4 2 0 0 2 2 2 1 NurA domain Pho88 PF10032.9 gi|156937198|ref|YP_001434994.1| - 0.061 12.6 1.2 0.073 12.3 1.2 1.2 1 0 0 1 1 1 0 Phosphate transport (Pho88) Aminotran_1_2 PF00155.21 gi|156937200|ref|YP_001434996.1| - 4.6e-44 151.1 0.0 5.6e-44 150.8 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Alliinase_C PF04864.13 gi|156937200|ref|YP_001434996.1| - 0.0073 15.2 0.0 0.012 14.6 0.0 1.2 1 0 0 1 1 1 1 Allinase Cys_Met_Meta_PP PF01053.20 gi|156937200|ref|YP_001434996.1| - 0.069 11.7 0.0 0.1 11.1 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme GATase_6 PF13522.6 gi|156937201|ref|YP_001434997.1| - 8.6e-20 71.3 0.0 1.3e-19 70.7 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|156937201|ref|YP_001434997.1| - 1.8e-19 69.8 0.0 2.7e-19 69.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 gi|156937201|ref|YP_001434997.1| - 0.00013 21.0 0.0 0.00019 20.4 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_2 PF00310.21 gi|156937201|ref|YP_001434997.1| - 0.0006 18.6 0.1 0.57 8.8 0.0 3.0 1 1 2 3 3 3 2 Glutamine amidotransferases class-II DUF2914 PF11141.8 gi|156937201|ref|YP_001434997.1| - 0.13 12.1 0.0 0.27 11.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2914) Glu_synthase PF01645.17 gi|156937202|ref|YP_001434998.1| - 1.1e-117 393.3 1.7 1.6e-117 392.8 1.7 1.2 1 0 0 1 1 1 1 Conserved region in glutamate synthase GXGXG PF01493.19 gi|156937202|ref|YP_001434998.1| - 8.8e-26 90.7 9.3 1.5e-25 89.9 9.3 1.3 1 0 0 1 1 1 1 GXGXG motif Fer4 PF00037.27 gi|156937202|ref|YP_001434998.1| - 2.2e-11 43.1 28.6 1.3e-06 27.9 4.7 3.7 3 1 0 3 3 3 2 4Fe-4S binding domain FMN_dh PF01070.18 gi|156937202|ref|YP_001434998.1| - 3.4e-11 42.8 7.5 2.6e-10 39.8 4.3 2.4 2 0 0 2 2 2 1 FMN-dependent dehydrogenase Fer4_7 PF12838.7 gi|156937202|ref|YP_001434998.1| - 6.9e-10 39.4 18.3 8.4e-08 32.7 12.8 2.9 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156937202|ref|YP_001434998.1| - 3.9e-09 36.5 19.9 8.2e-08 32.3 11.9 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|156937202|ref|YP_001434998.1| - 1.1e-08 35.0 10.6 1.1e-08 35.0 10.6 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|156937202|ref|YP_001434998.1| - 2.4e-08 34.4 9.5 0.0035 17.8 0.1 3.4 3 0 0 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937202|ref|YP_001434998.1| - 3.9e-08 34.1 15.4 0.00063 20.6 2.0 3.4 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|156937202|ref|YP_001434998.1| - 1.4e-07 31.5 18.3 7.2e-05 22.8 12.4 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937202|ref|YP_001434998.1| - 1.5e-07 31.2 29.1 8.9e-07 28.7 3.6 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain NMO PF03060.15 gi|156937202|ref|YP_001434998.1| - 1.6e-06 27.7 4.0 1.6e-06 27.7 4.0 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase Fer4_2 PF12797.7 gi|156937202|ref|YP_001434998.1| - 2.1e-06 27.5 26.7 4.1e-05 23.4 1.9 3.5 3 0 0 3 3 3 2 4Fe-4S binding domain IMPDH PF00478.25 gi|156937202|ref|YP_001434998.1| - 5.5e-06 25.6 5.2 1.1e-05 24.6 4.7 1.8 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Fer4_4 PF12800.7 gi|156937202|ref|YP_001434998.1| - 4.5e-05 23.6 23.2 0.0098 16.3 2.7 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|156937202|ref|YP_001434998.1| - 5e-05 24.1 6.0 0.019 15.8 0.1 3.4 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156937202|ref|YP_001434998.1| - 0.00021 21.7 15.8 0.29 11.6 0.9 3.4 2 1 2 4 4 4 3 4Fe-4S dicluster domain His_biosynth PF00977.21 gi|156937202|ref|YP_001434998.1| - 0.00027 20.5 0.2 0.00059 19.4 0.2 1.5 1 0 0 1 1 1 1 Histidine biosynthesis protein Glu_syn_central PF04898.14 gi|156937202|ref|YP_001434998.1| - 0.00053 19.5 1.1 0.0061 16.1 0.1 2.5 2 1 0 2 2 2 1 Glutamate synthase central domain ThiG PF05690.14 gi|156937202|ref|YP_001434998.1| - 0.0047 16.3 5.4 0.0063 15.9 0.9 2.2 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG Fer4_3 PF12798.7 gi|156937202|ref|YP_001434998.1| - 0.011 16.6 4.4 0.011 16.6 4.4 3.6 3 1 0 3 3 3 0 4Fe-4S binding domain PcrB PF01884.17 gi|156937202|ref|YP_001434998.1| - 0.086 12.3 0.2 0.086 12.3 0.2 2.5 2 1 1 3 3 3 0 PcrB family Fer4_18 PF13746.6 gi|156937202|ref|YP_001434998.1| - 0.34 11.1 14.9 0.27 11.4 1.9 2.9 2 1 1 3 3 3 0 4Fe-4S dicluster domain MFS_1 PF07690.16 gi|156937203|ref|YP_001434999.1| - 7.6e-07 28.4 31.1 2.6e-05 23.3 31.1 2.5 1 1 0 1 1 1 1 Major Facilitator Superfamily Lactamase_B PF00753.27 gi|156937204|ref|YP_001435000.1| - 6.2e-26 91.6 0.5 8.6e-26 91.2 0.5 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|156937204|ref|YP_001435000.1| - 1.2e-07 31.4 0.0 1.8e-07 30.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|156937204|ref|YP_001435000.1| - 0.017 14.5 0.0 0.026 14.0 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|156937204|ref|YP_001435000.1| - 0.048 13.5 0.0 0.14 12.0 0.0 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Rnk_N PF14760.6 gi|156937204|ref|YP_001435000.1| - 0.29 11.6 2.8 1.1 9.8 0.8 2.3 2 0 0 2 2 2 0 Rnk N-terminus ThiI PF02568.14 gi|156937206|ref|YP_001435002.1| - 8.5e-12 45.1 0.0 1.4e-11 44.4 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) HypD PF01924.16 gi|156937207|ref|YP_001435003.1| - 2.2e-124 415.1 0.0 2.4e-124 415.0 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase formation hypA family zf-RING_6 PF14835.6 gi|156937207|ref|YP_001435003.1| - 0.082 12.8 0.0 0.16 11.9 0.0 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein NMD3 PF04981.13 gi|156937208|ref|YP_001435004.1| - 4e-40 137.8 0.0 5.3e-40 137.4 0.0 1.2 1 0 0 1 1 1 1 NMD3 family NfeD PF01957.18 gi|156937208|ref|YP_001435004.1| - 0.026 14.9 0.1 0.093 13.1 0.1 1.9 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding zf-Di19 PF05605.12 gi|156937208|ref|YP_001435004.1| - 0.058 13.7 0.2 0.57 10.5 0.0 2.2 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DZR PF12773.7 gi|156937208|ref|YP_001435004.1| - 0.46 10.5 3.5 3.8 7.6 1.8 2.7 2 1 0 2 2 2 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|156937208|ref|YP_001435004.1| - 1.1 9.4 5.3 2.9 8.1 0.2 3.0 3 0 0 3 3 3 0 Zinc ribbon domain GPI PF06560.11 gi|156937209|ref|YP_001435005.1| - 9.8e-23 80.4 0.0 1.2e-22 80.0 0.0 1.1 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Cupin_2 PF07883.11 gi|156937209|ref|YP_001435005.1| - 1.1e-06 28.2 0.1 2.6e-06 27.0 0.1 1.6 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|156937209|ref|YP_001435005.1| - 3.3e-06 26.8 0.0 4.8e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_6 PF12852.7 gi|156937209|ref|YP_001435005.1| - 5.7e-06 26.2 0.0 7.2e-06 25.9 0.0 1.2 1 0 0 1 1 1 1 Cupin ARD PF03079.14 gi|156937209|ref|YP_001435005.1| - 1.4e-05 25.4 0.0 2.8e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 ARD/ARD' family VP9 PF09625.10 gi|156937209|ref|YP_001435005.1| - 0.034 14.3 0.1 2.5 8.3 0.0 2.2 2 0 0 2 2 2 0 VP9 protein AraC_binding PF02311.19 gi|156937209|ref|YP_001435005.1| - 0.041 13.8 0.1 0.065 13.1 0.1 1.2 1 0 0 1 1 1 0 AraC-like ligand binding domain Cupin_3 PF05899.12 gi|156937209|ref|YP_001435005.1| - 0.069 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF861) UbiA PF01040.18 gi|156937210|ref|YP_001435006.1| - 6.6e-41 140.3 14.5 8e-41 140.0 14.5 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF1269 PF06897.12 gi|156937210|ref|YP_001435006.1| - 0.024 14.9 4.8 0.94 9.8 0.4 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Got1 PF04178.12 gi|156937210|ref|YP_001435006.1| - 3.1 8.2 8.1 0.24 11.8 1.4 2.4 3 0 0 3 3 3 0 Got1/Sft2-like family Alba PF01918.21 gi|156937211|ref|YP_001435007.1| - 2.6e-13 49.6 1.2 3.2e-13 49.3 1.2 1.1 1 0 0 1 1 1 1 Alba Topoisom_bac PF01131.20 gi|156937212|ref|YP_001435008.1| - 1.5e-69 235.0 0.0 2.2e-69 234.5 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|156937212|ref|YP_001435008.1| - 5.8e-21 74.7 0.0 6e-20 71.4 0.0 2.8 3 0 0 3 3 2 1 Toprim domain zf_Rg PF17915.1 gi|156937212|ref|YP_001435008.1| - 1.6e-12 46.6 0.5 1.6e-12 46.6 0.5 1.8 2 0 0 2 2 1 1 Reverse gyrase zinc finger DEAD PF00270.29 gi|156937212|ref|YP_001435008.1| - 1.9e-10 40.8 0.0 1.4e-09 37.9 0.0 2.5 3 1 0 3 3 3 1 DEAD/DEAH box helicase AAA_30 PF13604.6 gi|156937212|ref|YP_001435008.1| - 2.4e-06 27.4 0.0 5.3e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 gi|156937212|ref|YP_001435008.1| - 2.1e-05 24.6 0.0 8e-05 22.7 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Toprim_4 PF13662.6 gi|156937212|ref|YP_001435008.1| - 0.0018 18.7 1.0 0.056 13.9 0.0 3.4 4 0 0 4 4 2 1 Toprim domain IstB_IS21 PF01695.17 gi|156937212|ref|YP_001435008.1| - 0.0033 17.2 0.0 0.013 15.2 0.0 2.0 1 0 0 1 1 1 1 IstB-like ATP binding protein CbiA PF01656.23 gi|156937212|ref|YP_001435008.1| - 0.0049 16.9 0.0 0.025 14.6 0.2 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_10 PF12846.7 gi|156937212|ref|YP_001435008.1| - 0.0055 15.7 0.0 0.018 14.0 0.0 1.8 1 0 0 1 1 1 1 AAA-like domain AAA_11 PF13086.6 gi|156937212|ref|YP_001435008.1| - 0.0058 16.5 0.0 0.011 15.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|156937212|ref|YP_001435008.1| - 0.021 15.2 0.0 0.041 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|156937212|ref|YP_001435008.1| - 0.038 13.7 0.0 0.07 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|156937212|ref|YP_001435008.1| - 0.04 13.9 0.0 0.12 12.3 0.0 1.9 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Helicase_RecD PF05127.14 gi|156937212|ref|YP_001435008.1| - 0.041 13.7 0.0 0.68 9.8 0.0 2.4 2 0 0 2 2 2 0 Helicase ABC_tran PF00005.27 gi|156937212|ref|YP_001435008.1| - 0.051 14.1 0.0 0.12 12.9 0.0 1.6 1 0 0 1 1 1 0 ABC transporter T2SSE PF00437.20 gi|156937212|ref|YP_001435008.1| - 0.064 12.3 0.0 0.12 11.4 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_22 PF13401.6 gi|156937212|ref|YP_001435008.1| - 0.082 13.2 0.0 0.46 10.8 0.0 2.3 1 0 0 1 1 1 0 AAA domain Zn-ribbon_8 PF09723.10 gi|156937212|ref|YP_001435008.1| - 0.31 11.2 5.7 4.1 7.6 0.1 2.7 2 0 0 2 2 2 0 Zinc ribbon domain DZR PF12773.7 gi|156937212|ref|YP_001435008.1| - 0.55 10.3 4.9 6.4 6.9 0.3 2.3 2 0 0 2 2 2 0 Double zinc ribbon DNA_ligase_ZBD PF03119.16 gi|156937212|ref|YP_001435008.1| - 2.5 8.2 8.1 5.2 7.2 2.5 2.7 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-ribbon_3 PF13248.6 gi|156937212|ref|YP_001435008.1| - 2.7 7.5 7.1 17 5.0 1.7 2.6 2 0 0 2 2 2 0 zinc-ribbon domain ANAPC4_WD40 PF12894.7 gi|156937213|ref|YP_001435009.1| - 1.5e-05 25.2 0.1 0.092 13.1 0.0 3.8 2 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Coatomer_WDAD PF04053.14 gi|156937213|ref|YP_001435009.1| - 8.2e-05 21.8 0.3 0.23 10.5 0.0 3.0 1 1 2 3 3 3 2 Coatomer WD associated region PQQ_2 PF13360.6 gi|156937213|ref|YP_001435009.1| - 0.00042 20.0 0.2 0.044 13.4 0.0 2.6 1 1 2 3 3 3 2 PQQ-like domain PQQ PF01011.21 gi|156937213|ref|YP_001435009.1| - 0.0036 17.2 0.2 0.022 14.7 0.0 2.4 3 0 0 3 3 3 1 PQQ enzyme repeat PQQ_3 PF13570.6 gi|156937213|ref|YP_001435009.1| - 0.015 15.7 0.0 15 6.2 0.0 3.5 3 0 0 3 3 3 0 PQQ-like domain eIF2A PF08662.11 gi|156937213|ref|YP_001435009.1| - 0.043 13.7 0.2 0.39 10.6 0.1 2.4 1 1 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A Lgl_C PF08596.10 gi|156937213|ref|YP_001435009.1| - 0.13 10.9 0.0 0.31 9.7 0.0 1.5 1 0 0 1 1 1 0 Lethal giant larvae(Lgl) like, C-terminal CCG PF02754.16 gi|156937214|ref|YP_001435010.1| - 3.8e-24 84.7 5.6 2.4e-11 43.7 1.3 2.3 2 0 0 2 2 2 2 Cysteine-rich domain DHBP_synthase PF00926.19 gi|156937215|ref|YP_001435011.1| - 3e-43 147.6 0.0 3.4e-43 147.4 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase eRF1_2 PF03464.15 gi|156937216|ref|YP_001435012.1| - 0.11 12.8 0.1 0.15 12.3 0.1 1.3 1 1 0 1 1 1 0 eRF1 domain 2 NTP_transf_2 PF01909.23 gi|156937217|ref|YP_001435013.1| - 5.5e-08 33.0 0.1 1.2e-07 31.9 0.1 1.8 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|156937217|ref|YP_001435013.1| - 9e-06 25.7 0.0 2.7e-05 24.2 0.0 1.8 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase DUF4269 PF14091.6 gi|156937217|ref|YP_001435013.1| - 0.018 15.3 0.0 0.04 14.2 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4269) HTH_AsnC-type PF13404.6 gi|156937217|ref|YP_001435013.1| - 0.12 12.3 0.1 0.23 11.3 0.1 1.5 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain DUF294 PF03445.13 gi|156937217|ref|YP_001435013.1| - 0.16 11.8 0.0 0.36 10.6 0.0 1.7 1 1 0 1 1 1 0 Putative nucleotidyltransferase DUF294 AIRS PF00586.24 gi|156937218|ref|YP_001435014.1| - 1.4e-06 28.9 3.9 5.1e-06 27.1 3.8 2.0 1 1 1 2 2 2 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|156937218|ref|YP_001435014.1| - 0.031 14.4 0.0 0.087 12.9 0.0 1.8 1 1 0 1 1 1 0 AIR synthase related protein, C-terminal domain PcrB PF01884.17 gi|156937219|ref|YP_001435015.1| - 1.2e-47 162.2 0.0 1.5e-47 161.9 0.0 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|156937219|ref|YP_001435015.1| - 9.5e-07 28.5 0.1 1.6e-06 27.8 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein NanE PF04131.14 gi|156937219|ref|YP_001435015.1| - 0.00035 19.8 0.2 0.00064 19.0 0.2 1.4 1 0 0 1 1 1 1 Putative N-acetylmannosamine-6-phosphate epimerase ETF PF01012.21 gi|156937219|ref|YP_001435015.1| - 0.0014 18.5 1.0 0.0024 17.8 1.0 1.3 1 0 0 1 1 1 1 Electron transfer flavoprotein domain BtpA PF03437.15 gi|156937219|ref|YP_001435015.1| - 0.003 17.0 0.3 0.0067 15.9 0.1 1.5 2 0 0 2 2 2 1 BtpA family DHO_dh PF01180.21 gi|156937219|ref|YP_001435015.1| - 0.0069 15.6 0.1 0.011 15.0 0.1 1.2 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Trp_syntA PF00290.20 gi|156937219|ref|YP_001435015.1| - 0.0072 15.2 0.7 0.011 14.6 0.2 1.5 2 0 0 2 2 2 1 Tryptophan synthase alpha chain IMPDH PF00478.25 gi|156937219|ref|YP_001435015.1| - 0.018 14.1 0.5 0.093 11.7 0.4 1.8 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain Ribul_P_3_epim PF00834.19 gi|156937219|ref|YP_001435015.1| - 0.045 13.1 0.2 0.086 12.2 0.2 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family B12-binding PF02310.19 gi|156937219|ref|YP_001435015.1| - 0.094 12.8 2.1 0.24 11.5 0.4 2.6 3 1 0 3 3 3 0 B12 binding domain Elf1 PF05129.13 gi|156937220|ref|YP_001435016.1| - 5.5e-09 35.9 0.1 6.6e-09 35.7 0.1 1.1 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like TF_Zn_Ribbon PF08271.12 gi|156937220|ref|YP_001435016.1| - 2.2e-05 23.9 0.3 5.8e-05 22.5 0.3 1.8 1 1 0 1 1 1 1 TFIIB zinc-binding DNA_RNApol_7kD PF03604.13 gi|156937220|ref|YP_001435016.1| - 0.0018 17.9 1.0 0.17 11.6 0.2 2.3 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit Lar_restr_allev PF14354.6 gi|156937220|ref|YP_001435016.1| - 0.0021 18.4 0.2 0.003 17.9 0.2 1.2 1 0 0 1 1 1 1 Restriction alleviation protein Lar zf-RING_7 PF02591.15 gi|156937220|ref|YP_001435016.1| - 0.0039 17.3 1.5 0.75 10.0 0.3 2.2 2 0 0 2 2 2 1 C4-type zinc ribbon domain zf-ribbon_3 PF13248.6 gi|156937220|ref|YP_001435016.1| - 0.0082 15.5 1.6 0.19 11.2 0.2 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zf-DNA_Pol PF08996.10 gi|156937220|ref|YP_001435016.1| - 0.0094 15.7 0.0 0.01 15.6 0.0 1.0 1 0 0 1 1 1 1 DNA Polymerase alpha zinc finger TFIIS_C PF01096.18 gi|156937220|ref|YP_001435016.1| - 0.011 15.6 0.6 0.02 14.7 0.6 1.4 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) zinc_ribbon_4 PF13717.6 gi|156937220|ref|YP_001435016.1| - 0.013 15.4 2.0 2.4 8.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-C2H2_3 PF13878.6 gi|156937220|ref|YP_001435016.1| - 0.014 15.2 0.5 0.37 10.6 0.0 2.1 2 0 0 2 2 2 0 zinc-finger of acetyl-transferase ESCO DUF1610 PF07754.11 gi|156937220|ref|YP_001435016.1| - 0.02 14.9 1.6 0.02 14.9 1.6 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Zn_ribbon_SprT PF17283.2 gi|156937220|ref|YP_001435016.1| - 0.033 14.1 0.1 0.048 13.6 0.1 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain Terminase_GpA PF05876.12 gi|156937220|ref|YP_001435016.1| - 0.05 12.1 0.1 0.056 12.0 0.1 1.1 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) RNHCP PF12647.7 gi|156937220|ref|YP_001435016.1| - 0.056 13.4 2.5 0.15 12.1 0.9 1.9 1 1 1 2 2 2 0 RNHCP domain OrfB_Zn_ribbon PF07282.11 gi|156937220|ref|YP_001435016.1| - 0.063 13.2 0.2 8 6.5 0.1 2.2 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Rubredoxin PF00301.20 gi|156937220|ref|YP_001435016.1| - 0.068 13.2 0.5 0.73 9.9 0.1 2.1 2 0 0 2 2 2 0 Rubredoxin zinc_ribbon_10 PF10058.9 gi|156937220|ref|YP_001435016.1| - 0.081 12.7 1.2 3.2 7.5 0.1 2.3 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zinc_ribbon_5 PF13719.6 gi|156937220|ref|YP_001435016.1| - 0.088 12.6 3.6 0.68 9.7 3.6 2.0 1 1 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|156937220|ref|YP_001435016.1| - 0.088 12.6 2.6 0.48 10.2 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-Mss51 PF13824.6 gi|156937220|ref|YP_001435016.1| - 0.12 12.5 0.6 14 5.8 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-tcix PF14952.6 gi|156937220|ref|YP_001435016.1| - 0.13 11.9 1.6 3.3 7.4 0.1 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DUF35_N PF12172.8 gi|156937220|ref|YP_001435016.1| - 0.13 12.1 0.8 11 6.0 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-NADH-PPase PF09297.11 gi|156937220|ref|YP_001435016.1| - 0.17 11.6 3.5 4 7.2 0.4 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L32p PF01783.23 gi|156937220|ref|YP_001435016.1| - 0.2 11.9 0.7 7.1 7.0 0.1 2.2 2 0 0 2 2 2 0 Ribosomal L32p protein family Rubredoxin_2 PF18073.1 gi|156937220|ref|YP_001435016.1| - 0.2 11.4 3.1 3.2 7.5 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Zn-ribbon_8 PF09723.10 gi|156937220|ref|YP_001435016.1| - 0.25 11.5 4.0 6.5 7.0 0.4 2.2 1 1 0 2 2 2 0 Zinc ribbon domain zf-C2H2_11 PF16622.5 gi|156937220|ref|YP_001435016.1| - 0.31 10.8 1.3 11 5.9 0.1 2.2 2 0 0 2 2 2 0 zinc-finger C2H2-type zf-DNL PF05180.12 gi|156937220|ref|YP_001435016.1| - 0.36 10.8 4.7 1 9.4 0.4 2.1 1 1 1 2 2 2 0 DNL zinc finger Nudix_N_2 PF14803.6 gi|156937220|ref|YP_001435016.1| - 0.58 10.1 4.4 15 5.6 0.3 2.9 3 0 0 3 3 3 0 Nudix N-terminal SWIM PF04434.17 gi|156937221|ref|YP_001435017.1| - 0.0022 17.6 1.9 0.0044 16.6 1.9 1.5 1 1 0 1 1 1 1 SWIM zinc finger Rib_5-P_isom_A PF06026.14 gi|156937222|ref|YP_001435018.1| - 1.4e-45 155.0 0.0 1.6e-45 154.8 0.0 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|156937222|ref|YP_001435018.1| - 0.00036 20.5 0.0 0.00066 19.6 0.0 1.6 1 0 0 1 1 1 1 DeoR C terminal sensor domain Defensin_propep PF00879.18 gi|156937223|ref|YP_001435019.1| - 5.2 7.4 5.5 9.3 6.6 5.5 1.4 1 0 0 1 1 1 0 Defensin propeptide Hepar_II_III PF07940.13 gi|156937224|ref|YP_001435020.1| - 3e-08 33.6 0.3 2.7e-07 30.5 0.1 2.1 2 0 0 2 2 2 1 Heparinase II/III-like protein Hepar_II_III_N PF16889.5 gi|156937224|ref|YP_001435020.1| - 0.0062 15.8 0.0 0.0096 15.2 0.0 1.2 1 0 0 1 1 1 1 Heparinase II/III N-terminus Trp_syntA PF00290.20 gi|156937225|ref|YP_001435021.1| - 6.6e-31 107.1 0.0 8.5e-31 106.7 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain Ribul_P_3_epim PF00834.19 gi|156937225|ref|YP_001435021.1| - 5e-06 26.0 0.0 7.8e-06 25.4 0.0 1.3 1 0 0 1 1 1 1 Ribulose-phosphate 3 epimerase family PcrB PF01884.17 gi|156937225|ref|YP_001435021.1| - 0.013 15.0 0.2 0.028 13.9 0.0 1.6 2 0 0 2 2 2 0 PcrB family BtpA PF03437.15 gi|156937225|ref|YP_001435021.1| - 0.085 12.3 0.0 0.11 11.9 0.0 1.2 1 0 0 1 1 1 0 BtpA family TMP-TENI PF02581.17 gi|156937225|ref|YP_001435021.1| - 0.13 11.6 0.0 0.19 11.0 0.0 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase SRR PF07709.11 gi|156937225|ref|YP_001435021.1| - 3 8.6 9.6 8.8 7.2 2.6 3.0 3 0 0 3 3 3 0 Seven Residue Repeat LVIVD PF08309.11 gi|156937228|ref|YP_001435024.1| - 0.0013 18.0 0.2 0.0013 18.0 0.2 4.3 5 0 0 5 5 5 2 LVIVD repeat eIF2A PF08662.11 gi|156937228|ref|YP_001435024.1| - 0.029 14.2 0.2 0.11 12.4 0.0 1.9 2 0 0 2 2 2 0 Eukaryotic translation initiation factor eIF2A CHU_C PF13585.6 gi|156937228|ref|YP_001435024.1| - 0.2 11.7 0.2 0.2 11.7 0.2 2.2 2 0 0 2 2 2 0 C-terminal domain of CHU protein family PQQ_2 PF13360.6 gi|156937229|ref|YP_001435025.1| - 7e-05 22.5 0.0 0.00065 19.4 0.0 2.2 1 1 1 2 2 2 1 PQQ-like domain PQQ_3 PF13570.6 gi|156937229|ref|YP_001435025.1| - 0.005 17.3 0.0 3.8 8.1 0.0 3.2 3 0 0 3 3 3 2 PQQ-like domain LVIVD PF08309.11 gi|156937229|ref|YP_001435025.1| - 0.0087 15.4 0.4 0.13 11.6 0.1 2.3 2 0 0 2 2 2 1 LVIVD repeat Pkinase PF00069.25 gi|156937230|ref|YP_001435026.1| - 1.9e-18 66.8 0.0 3.2e-18 66.1 0.0 1.3 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|156937230|ref|YP_001435026.1| - 1.9e-11 43.8 0.0 4.4e-11 42.5 0.0 1.6 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 gi|156937230|ref|YP_001435026.1| - 0.00032 20.1 0.0 0.00047 19.6 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Seadorna_VP7 PF07387.11 gi|156937230|ref|YP_001435026.1| - 0.013 14.6 0.0 0.017 14.2 0.0 1.1 1 0 0 1 1 1 0 Seadornavirus VP7 Phe_tRNA-synt_N PF02912.18 gi|156937230|ref|YP_001435026.1| - 0.067 13.1 0.4 0.16 12.0 0.4 1.5 1 0 0 1 1 1 0 Aminoacyl tRNA synthetase class II, N-terminal domain Kdo PF06293.14 gi|156937230|ref|YP_001435026.1| - 0.2 11.0 0.0 0.31 10.4 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF4795 PF16043.5 gi|156937231|ref|YP_001435027.1| - 7.4e-09 35.5 19.0 2.7e-05 23.8 3.6 2.1 1 1 1 2 2 2 2 Domain of unknown function (DUF4795) Apolipoprotein PF01442.18 gi|156937231|ref|YP_001435027.1| - 1.6e-08 34.7 16.3 2.6e-08 34.0 14.7 2.2 2 1 0 2 2 1 1 Apolipoprotein A1/A4/E domain Baculo_PEP_C PF04513.12 gi|156937231|ref|YP_001435027.1| - 2.3e-08 34.2 2.2 0.00015 21.8 1.9 2.2 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus HSBP1 PF06825.12 gi|156937231|ref|YP_001435027.1| - 4.5e-07 29.6 21.9 0.05 13.5 1.5 4.2 1 1 3 4 4 4 3 Heat shock factor binding protein 1 DUF1664 PF07889.12 gi|156937231|ref|YP_001435027.1| - 2.5e-06 27.6 13.7 0.0056 16.7 2.5 2.7 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) DUF4164 PF13747.6 gi|156937231|ref|YP_001435027.1| - 2.3e-05 24.6 19.5 0.00064 20.0 11.1 2.3 1 1 1 2 2 2 2 Domain of unknown function (DUF4164) AAA_13 PF13166.6 gi|156937231|ref|YP_001435027.1| - 3.4e-05 22.7 8.9 4e-05 22.5 8.9 1.0 1 0 0 1 1 1 1 AAA domain Phage_Mu_Gam PF07352.12 gi|156937231|ref|YP_001435027.1| - 3.9e-05 23.6 12.9 0.0089 15.9 2.2 2.3 1 1 1 2 2 2 2 Bacteriophage Mu Gam like protein Mer2 PF09074.10 gi|156937231|ref|YP_001435027.1| - 6.4e-05 22.9 11.9 0.00013 21.9 11.9 1.5 1 0 0 1 1 1 1 Mer2 DUF948 PF06103.11 gi|156937231|ref|YP_001435027.1| - 7.1e-05 23.0 9.3 0.098 12.9 1.4 3.4 1 1 1 2 2 2 2 Bacterial protein of unknown function (DUF948) ApoLp-III PF07464.11 gi|156937231|ref|YP_001435027.1| - 0.00012 22.2 7.1 0.016 15.3 3.0 2.6 2 1 1 3 3 2 2 Apolipophorin-III precursor (apoLp-III) CdvA PF18822.1 gi|156937231|ref|YP_001435027.1| - 0.00013 21.8 21.2 0.01 15.6 4.9 3.5 2 1 2 4 4 3 3 CdvA-like coiled-coil domain Tektin PF03148.14 gi|156937231|ref|YP_001435027.1| - 0.00019 20.3 14.9 0.0012 17.7 14.8 1.9 1 1 0 1 1 1 1 Tektin family Fzo_mitofusin PF04799.13 gi|156937231|ref|YP_001435027.1| - 0.00026 20.6 12.7 0.13 11.8 3.1 2.9 1 1 2 3 3 3 3 fzo-like conserved region DUF3584 PF12128.8 gi|156937231|ref|YP_001435027.1| - 0.00029 18.5 7.1 0.00039 18.1 7.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) MafB PF06255.13 gi|156937231|ref|YP_001435027.1| - 0.00034 20.1 2.1 0.00088 18.8 0.7 1.9 1 1 1 2 2 2 1 Neisseria toxin MafB Exonuc_VII_L PF02601.15 gi|156937231|ref|YP_001435027.1| - 0.00056 19.6 4.5 0.00065 19.4 4.5 1.3 1 0 0 1 1 1 1 Exonuclease VII, large subunit DUF4407 PF14362.6 gi|156937231|ref|YP_001435027.1| - 0.00082 18.8 5.9 0.0014 18.0 5.9 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) Phasin PF05597.11 gi|156937231|ref|YP_001435027.1| - 0.00086 19.3 10.7 0.016 15.2 4.9 2.3 1 1 1 2 2 2 1 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF883 PF05957.13 gi|156937231|ref|YP_001435027.1| - 0.0014 19.2 7.5 0.024 15.2 3.0 2.5 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF883) DLP_helical PF18709.1 gi|156937231|ref|YP_001435027.1| - 0.0017 17.6 12.1 0.0031 16.8 12.1 1.3 1 1 0 1 1 1 1 Dynamin-like helical domain HrpB7 PF09486.10 gi|156937231|ref|YP_001435027.1| - 0.0026 18.2 6.2 0.019 15.4 1.0 2.5 1 1 0 2 2 2 1 Bacterial type III secretion protein (HrpB7) NPV_P10 PF05531.12 gi|156937231|ref|YP_001435027.1| - 0.0027 18.1 7.9 0.55 10.7 0.4 3.3 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein IFT57 PF10498.9 gi|156937231|ref|YP_001435027.1| - 0.0037 16.3 14.0 0.021 13.8 6.2 2.0 1 1 1 2 2 2 1 Intra-flagellar transport protein 57 SbsC_C PF18058.1 gi|156937231|ref|YP_001435027.1| - 0.0047 17.2 3.7 1.4 9.1 1.3 2.7 1 1 1 2 2 2 0 SbsC C-terminal domain AAA_32 PF13654.6 gi|156937231|ref|YP_001435027.1| - 0.0063 15.4 3.8 0.0063 15.4 3.8 2.0 1 1 1 2 2 2 2 AAA domain Prominin PF05478.11 gi|156937231|ref|YP_001435027.1| - 0.0075 14.3 7.8 0.012 13.6 7.8 1.3 1 1 0 1 1 1 1 Prominin HMMR_N PF15905.5 gi|156937231|ref|YP_001435027.1| - 0.0078 15.7 14.5 0.013 15.0 14.5 1.3 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal MCPsignal PF00015.21 gi|156937231|ref|YP_001435027.1| - 0.0084 15.9 2.0 0.013 15.3 1.5 1.6 1 1 0 1 1 1 1 Methyl-accepting chemotaxis protein (MCP) signalling domain FapA PF03961.13 gi|156937231|ref|YP_001435027.1| - 0.0089 14.7 15.4 0.0067 15.1 8.9 2.0 1 1 1 2 2 2 1 Flagellar Assembly Protein A Mt_ATP-synt_D PF05873.12 gi|156937231|ref|YP_001435027.1| - 0.009 15.9 11.7 1.9 8.3 0.7 3.0 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) Prefoldin_2 PF01920.20 gi|156937231|ref|YP_001435027.1| - 0.013 15.4 17.3 0.81 9.7 4.7 3.5 1 1 2 3 3 3 0 Prefoldin subunit COG5 PF10392.9 gi|156937231|ref|YP_001435027.1| - 0.014 15.6 9.0 0.45 10.7 8.9 2.3 1 1 0 1 1 1 0 Golgi transport complex subunit 5 SF-assemblin PF06705.11 gi|156937231|ref|YP_001435027.1| - 0.014 14.7 18.9 0.02 14.2 18.9 1.2 1 0 0 1 1 1 0 SF-assemblin/beta giardin FliD_C PF07195.12 gi|156937231|ref|YP_001435027.1| - 0.016 14.6 9.1 4.1 6.8 1.4 2.7 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus KfrA_N PF11740.8 gi|156937231|ref|YP_001435027.1| - 0.017 15.8 6.6 0.022 15.4 1.8 2.7 2 1 1 3 3 2 0 Plasmid replication region DNA-binding N-term ARGLU PF15346.6 gi|156937231|ref|YP_001435027.1| - 0.018 15.0 24.4 0.14 12.0 24.5 2.1 1 1 0 1 1 1 0 Arginine and glutamate-rich 1 OmpH PF03938.14 gi|156937231|ref|YP_001435027.1| - 0.018 15.4 6.1 0.018 15.4 6.1 2.3 1 1 1 2 2 2 0 Outer membrane protein (OmpH-like) SlyX PF04102.12 gi|156937231|ref|YP_001435027.1| - 0.021 15.4 12.0 0.11 13.1 3.2 3.9 1 1 2 3 3 3 0 SlyX Atg14 PF10186.9 gi|156937231|ref|YP_001435027.1| - 0.023 13.8 10.1 0.04 13.0 10.1 1.4 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HIP1_clath_bdg PF16515.5 gi|156937231|ref|YP_001435027.1| - 0.026 15.1 16.9 0.56 10.8 11.1 3.0 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 HalX PF08663.10 gi|156937231|ref|YP_001435027.1| - 0.027 14.8 12.6 0.38 11.1 1.7 3.7 3 1 1 4 4 3 0 HalX domain YtxH PF12732.7 gi|156937231|ref|YP_001435027.1| - 0.03 14.8 10.0 0.04 14.5 2.2 2.7 2 1 1 3 3 2 0 YtxH-like protein Carbpep_Y_N PF05388.11 gi|156937231|ref|YP_001435027.1| - 0.031 14.8 5.6 0.12 12.9 3.7 2.7 2 1 1 3 3 3 0 Carboxypeptidase Y pro-peptide TPR_MLP1_2 PF07926.12 gi|156937231|ref|YP_001435027.1| - 0.031 14.3 16.0 1.8 8.6 7.5 2.9 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein T3SS_needle_F PF09392.10 gi|156937231|ref|YP_001435027.1| - 0.034 14.4 4.2 19 5.5 2.0 3.7 1 1 1 2 2 2 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FAM184 PF15665.5 gi|156937231|ref|YP_001435027.1| - 0.034 13.9 13.4 0.055 13.2 13.4 1.3 1 0 0 1 1 1 0 Family with sequence similarity 184, A and B Med9 PF07544.13 gi|156937231|ref|YP_001435027.1| - 0.038 14.1 0.9 0.038 14.1 0.9 3.0 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 HSCB_C PF07743.13 gi|156937231|ref|YP_001435027.1| - 0.044 14.3 21.2 0.72 10.4 3.9 3.6 2 1 1 3 3 2 0 HSCB C-terminal oligomerisation domain Prefoldin PF02996.17 gi|156937231|ref|YP_001435027.1| - 0.049 13.5 12.8 2.1 8.3 0.5 3.4 1 1 1 2 2 2 0 Prefoldin subunit DUF4618 PF15397.6 gi|156937231|ref|YP_001435027.1| - 0.055 12.9 15.8 0.092 12.1 8.2 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) DUF4446 PF14584.6 gi|156937231|ref|YP_001435027.1| - 0.055 13.5 12.2 0.59 10.1 3.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) YlqD PF11068.8 gi|156937231|ref|YP_001435027.1| - 0.055 13.8 11.6 0.16 12.4 2.5 2.2 1 1 1 2 2 2 0 YlqD protein APG17 PF04108.12 gi|156937231|ref|YP_001435027.1| - 0.058 12.5 12.9 2 7.4 11.6 2.8 1 1 1 2 2 2 0 Autophagy protein Apg17 Dynamin_M PF01031.20 gi|156937231|ref|YP_001435027.1| - 0.064 12.5 7.2 0.55 9.4 0.1 2.3 1 1 1 2 2 2 0 Dynamin central region Tht1 PF04163.12 gi|156937231|ref|YP_001435027.1| - 0.072 11.9 6.4 0.083 11.6 6.4 1.1 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein Spc7 PF08317.11 gi|156937231|ref|YP_001435027.1| - 0.076 11.9 17.9 0.023 13.6 6.2 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein ApoO PF09769.9 gi|156937231|ref|YP_001435027.1| - 0.083 12.8 1.0 2.8 7.9 0.1 2.5 1 1 2 3 3 3 0 Apolipoprotein O CLZ PF16526.5 gi|156937231|ref|YP_001435027.1| - 0.089 13.2 19.3 0.34 11.3 5.6 3.7 2 1 1 4 4 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4455 PF14643.6 gi|156937231|ref|YP_001435027.1| - 0.09 11.4 14.3 0.27 9.8 14.3 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4455) PIN_8 PF18476.1 gi|156937231|ref|YP_001435027.1| - 0.096 12.5 9.7 0.3 10.9 9.7 1.9 1 1 0 1 1 1 0 PIN like domain DUF4854 PF16146.5 gi|156937231|ref|YP_001435027.1| - 0.1 12.9 2.0 5.8 7.3 0.1 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4854) DUF16 PF01519.16 gi|156937231|ref|YP_001435027.1| - 0.1 13.1 16.2 7.3 7.1 16.2 2.6 1 1 0 1 1 1 0 Protein of unknown function DUF16 COG2 PF06148.11 gi|156937231|ref|YP_001435027.1| - 0.12 12.4 14.8 1.8 8.6 0.8 3.2 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 Mitofilin PF09731.9 gi|156937231|ref|YP_001435027.1| - 0.13 11.0 12.8 0.17 10.7 12.8 1.2 1 0 0 1 1 1 0 Mitochondrial inner membrane protein Mga PF05043.13 gi|156937231|ref|YP_001435027.1| - 0.13 12.8 7.6 11 6.6 1.6 3.5 1 1 3 4 4 3 0 Mga helix-turn-helix domain LPP PF04728.13 gi|156937231|ref|YP_001435027.1| - 0.14 12.6 7.2 14 6.2 0.4 4.0 1 1 2 3 3 3 0 Lipoprotein leucine-zipper TnpV PF14198.6 gi|156937231|ref|YP_001435027.1| - 0.16 12.0 10.9 0.93 9.5 0.9 3.0 1 1 2 3 3 3 0 Transposon-encoded protein TnpV DUF4351 PF14261.6 gi|156937231|ref|YP_001435027.1| - 0.19 11.8 7.3 22 5.2 0.2 3.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4351) HisKA_3 PF07730.13 gi|156937231|ref|YP_001435027.1| - 0.2 12.2 6.0 14 6.3 1.5 3.4 1 1 1 2 2 2 0 Histidine kinase FAP206 PF12018.8 gi|156937231|ref|YP_001435027.1| - 0.2 11.2 10.1 1.3 8.5 0.6 3.2 1 1 2 3 3 3 0 Domain of unknown function Syntaxin-6_N PF09177.11 gi|156937231|ref|YP_001435027.1| - 0.2 12.2 10.9 0.23 12.1 2.3 2.5 1 1 1 2 2 2 0 Syntaxin 6, N-terminal TssO PF17561.2 gi|156937231|ref|YP_001435027.1| - 0.21 11.7 12.4 6.6 6.8 0.3 2.9 1 1 0 2 2 2 0 Type VI secretion system, TssO Myb_CC_LHEQLE PF14379.6 gi|156937231|ref|YP_001435027.1| - 0.23 11.2 12.1 0.34 10.6 2.7 3.5 2 1 1 3 3 2 0 MYB-CC type transfactor, LHEQLE motif V_ATPase_I PF01496.19 gi|156937231|ref|YP_001435027.1| - 0.24 9.3 10.7 0.09 10.7 1.3 2.0 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family WXG100 PF06013.12 gi|156937231|ref|YP_001435027.1| - 0.24 11.7 3.5 5.5 7.3 1.3 3.4 2 1 0 2 2 1 0 Proteins of 100 residues with WXG Mit_KHE1 PF10173.9 gi|156937231|ref|YP_001435027.1| - 0.25 11.4 5.1 3.2 7.8 0.5 2.1 1 1 1 2 2 2 0 Mitochondrial K+-H+ exchange-related Mt_ATP-synt_B PF05405.14 gi|156937231|ref|YP_001435027.1| - 0.25 10.9 9.0 0.8 9.3 1.3 3.2 1 1 2 3 3 3 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) BshC PF10079.9 gi|156937231|ref|YP_001435027.1| - 0.25 10.0 8.0 0.44 9.2 8.0 1.4 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC Nup54 PF13874.6 gi|156937231|ref|YP_001435027.1| - 0.26 11.4 11.4 1.1 9.4 9.5 2.7 1 1 1 2 2 2 0 Nucleoporin complex subunit 54 TMPIT PF07851.13 gi|156937231|ref|YP_001435027.1| - 0.26 10.5 9.9 0.15 11.3 6.5 1.9 1 1 1 2 2 2 0 TMPIT-like protein Histidinol_dh PF00815.20 gi|156937231|ref|YP_001435027.1| - 0.27 10.2 3.6 0.25 10.3 1.4 1.7 1 1 1 2 2 2 0 Histidinol dehydrogenase Spectrin PF00435.21 gi|156937231|ref|YP_001435027.1| - 0.29 11.6 10.8 0.71 10.4 8.7 2.3 1 1 1 2 2 2 0 Spectrin repeat DASH_Spc19 PF08287.11 gi|156937231|ref|YP_001435027.1| - 0.3 11.0 14.7 0.055 13.4 7.1 2.5 1 1 1 2 2 2 0 Spc19 AD PF09793.9 gi|156937231|ref|YP_001435027.1| - 0.32 11.1 5.6 0.45 10.7 1.8 2.3 1 1 0 2 2 2 0 Anticodon-binding domain MnmE_helical PF12631.7 gi|156937231|ref|YP_001435027.1| - 0.33 11.1 8.5 3.6 7.7 0.3 2.3 1 1 1 2 2 2 0 MnmE helical domain LprI PF07007.12 gi|156937231|ref|YP_001435027.1| - 0.33 11.6 2.4 6.9 7.4 0.3 2.9 1 1 1 2 2 2 0 Lysozyme inhibitor LprI Streptin-Immun PF11083.8 gi|156937231|ref|YP_001435027.1| - 0.34 11.3 17.1 4.5 7.7 0.7 3.5 1 1 2 3 3 3 0 Lantibiotic streptin immunity protein Rad50_zn_hook PF04423.14 gi|156937231|ref|YP_001435027.1| - 0.39 10.6 10.5 2.8 7.8 0.1 4.4 3 2 0 4 4 3 0 Rad50 zinc hook motif HAUS-augmin3 PF14932.6 gi|156937231|ref|YP_001435027.1| - 0.48 10.0 8.9 0.4 10.2 5.1 1.9 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Fib_alpha PF08702.10 gi|156937231|ref|YP_001435027.1| - 0.5 10.6 14.5 6.2 7.0 8.9 2.3 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family LXG PF04740.12 gi|156937231|ref|YP_001435027.1| - 0.52 10.0 8.7 1.7 8.3 8.7 1.9 1 1 0 1 1 1 0 LXG domain of WXG superfamily BLOC1_2 PF10046.9 gi|156937231|ref|YP_001435027.1| - 0.56 10.6 13.8 0.67 10.3 0.6 3.1 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 FlaC_arch PF05377.11 gi|156937231|ref|YP_001435027.1| - 0.56 10.6 0.1 0.56 10.6 0.1 4.6 2 1 0 2 2 1 0 Flagella accessory protein C (FlaC) DUF745 PF05335.13 gi|156937231|ref|YP_001435027.1| - 0.58 9.9 4.7 1.7 8.3 0.5 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF745) KxDL PF10241.9 gi|156937231|ref|YP_001435027.1| - 0.6 10.4 11.8 0.91 9.8 2.9 3.0 1 1 2 3 3 3 0 Uncharacterized conserved protein DUF812 PF05667.11 gi|156937231|ref|YP_001435027.1| - 0.61 8.9 19.2 1.6 7.5 19.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF812) DUF1845 PF08900.11 gi|156937231|ref|YP_001435027.1| - 0.63 9.7 6.2 18 5.0 0.3 3.0 1 1 2 3 3 3 0 Domain of unknown function (DUF1845) FlxA PF14282.6 gi|156937231|ref|YP_001435027.1| - 0.74 9.8 8.6 5.1 7.1 0.7 2.6 1 1 1 2 2 2 0 FlxA-like protein Occludin_ELL PF07303.13 gi|156937231|ref|YP_001435027.1| - 0.78 10.5 8.9 1.6 9.5 0.7 3.0 2 1 1 3 3 2 0 Occludin homology domain DUF2203 PF09969.9 gi|156937231|ref|YP_001435027.1| - 0.84 10.4 10.6 1.5 9.5 2.9 2.3 1 1 1 2 2 2 0 Uncharacterized conserved protein (DUF2203) MAP65_ASE1 PF03999.12 gi|156937231|ref|YP_001435027.1| - 0.84 8.3 18.7 3.6 6.2 0.2 1.8 1 1 1 2 2 2 0 Microtubule associated protein (MAP65/ASE1 family) Col_cuticle_N PF01484.17 gi|156937231|ref|YP_001435027.1| - 0.86 9.7 4.1 1.3 9.2 0.5 2.6 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain DUF5344 PF17279.2 gi|156937231|ref|YP_001435027.1| - 0.92 10.1 7.0 8.3 7.1 2.2 2.6 1 1 1 2 2 2 0 Family of unknown function (DUF5344) DUF1451 PF07295.11 gi|156937231|ref|YP_001435027.1| - 0.93 9.5 8.9 3.9 7.5 8.6 2.2 1 1 0 1 1 1 0 Zinc-ribbon containing domain Hemagglutinin PF00509.18 gi|156937231|ref|YP_001435027.1| - 0.94 7.8 11.7 0.79 8.1 5.7 2.0 1 1 1 2 2 2 0 Haemagglutinin Nup88 PF10168.9 gi|156937231|ref|YP_001435027.1| - 1 7.1 14.8 1.3 6.8 14.8 1.1 1 0 0 1 1 1 0 Nuclear pore component UPF0449 PF15136.6 gi|156937231|ref|YP_001435027.1| - 1 9.8 12.8 2.6 8.6 2.0 2.8 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 DUF87 PF01935.17 gi|156937231|ref|YP_001435027.1| - 1.1 9.3 7.6 1.9 8.6 7.5 1.5 1 1 0 1 1 1 0 Helicase HerA, central domain ISG65-75 PF11727.8 gi|156937231|ref|YP_001435027.1| - 1.1 8.4 7.0 0.39 9.9 1.7 1.9 1 1 1 2 2 2 0 Invariant surface glycoprotein PBECR5 PF18814.1 gi|156937231|ref|YP_001435027.1| - 1.1 9.1 10.2 3.1 7.7 9.8 1.8 1 1 1 2 2 2 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 CagA PF03507.13 gi|156937231|ref|YP_001435027.1| - 1.2 9.0 4.8 6.5 6.6 0.1 2.6 1 1 0 2 2 2 0 CagA exotoxin CorA PF01544.18 gi|156937231|ref|YP_001435027.1| - 1.2 8.4 17.7 4.2 6.6 13.5 2.4 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DUF1640 PF07798.11 gi|156937231|ref|YP_001435027.1| - 1.3 9.1 20.6 4.3 7.3 14.4 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) DUF848 PF05852.11 gi|156937231|ref|YP_001435027.1| - 1.4 9.0 17.9 4.6 7.4 1.0 2.5 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) TraF_2 PF13729.6 gi|156937231|ref|YP_001435027.1| - 1.6 8.0 7.8 6.3 6.1 3.1 2.3 1 1 1 2 2 2 0 F plasmid transfer operon, TraF, protein FAM76 PF16046.5 gi|156937231|ref|YP_001435027.1| - 1.6 8.0 15.2 1.6 8.0 5.4 2.0 1 1 1 2 2 2 0 FAM76 protein HLH PF00010.26 gi|156937231|ref|YP_001435027.1| - 1.8 8.6 8.1 7.1 6.7 0.0 4.2 2 2 2 4 4 4 0 Helix-loop-helix DNA-binding domain DUF3552 PF12072.8 gi|156937231|ref|YP_001435027.1| - 1.9 7.9 24.0 3.1 7.1 6.6 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) LMBR1 PF04791.16 gi|156937231|ref|YP_001435027.1| - 1.9 7.3 5.3 2.2 7.1 5.3 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Allexi_40kDa PF05549.11 gi|156937231|ref|YP_001435027.1| - 1.9 7.9 7.7 1.1 8.7 2.8 2.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein DUF1043 PF06295.12 gi|156937231|ref|YP_001435027.1| - 2 8.4 6.4 29 4.7 0.2 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) ABC_tran_CTD PF16326.5 gi|156937231|ref|YP_001435027.1| - 2.1 8.7 18.1 11 6.4 0.8 4.1 2 1 2 4 4 3 0 ABC transporter C-terminal domain DUF1366 PF07104.11 gi|156937231|ref|YP_001435027.1| - 2.1 8.1 9.0 0.45 10.2 1.2 2.9 2 1 2 4 4 2 0 Protein of unknown function (DUF1366) P4Ha_N PF08336.11 gi|156937231|ref|YP_001435027.1| - 2.3 8.3 10.8 33 4.5 0.6 2.3 1 1 1 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region KMP11 PF03037.16 gi|156937231|ref|YP_001435027.1| - 2.3 9.0 10.2 1.3 9.9 4.6 3.0 2 1 1 3 3 2 0 Kinetoplastid membrane protein 11 Snapin_Pallidin PF14712.6 gi|156937231|ref|YP_001435027.1| - 2.5 8.6 15.8 4.6 7.7 5.9 3.1 1 1 2 3 3 3 0 Snapin/Pallidin MerR-DNA-bind PF09278.11 gi|156937231|ref|YP_001435027.1| - 2.6 8.6 13.0 9.7 6.8 2.3 3.8 1 1 2 3 3 3 0 MerR, DNA binding Helo_like_N PF17111.5 gi|156937231|ref|YP_001435027.1| - 2.8 7.2 14.3 4.9 6.5 6.0 2.7 1 1 2 3 3 3 0 Fungal N-terminal domain of STAND proteins DUF1542 PF07564.11 gi|156937231|ref|YP_001435027.1| - 2.9 8.1 9.3 4.9 7.3 6.3 2.5 2 1 0 2 2 2 0 Domain of Unknown Function (DUF1542) SWI-SNF_Ssr4 PF08549.10 gi|156937231|ref|YP_001435027.1| - 3.2 6.3 10.8 4.1 5.9 10.8 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) UPF0061 PF02696.14 gi|156937231|ref|YP_001435027.1| - 3.3 6.4 5.6 4.8 5.8 5.6 1.4 1 1 0 1 1 1 0 Uncharacterized ACR, YdiU/UPF0061 family YojJ PF10372.9 gi|156937231|ref|YP_001435027.1| - 3.6 7.7 10.8 9.7 6.4 0.5 3.3 1 1 2 3 3 3 0 Bacterial membrane-spanning protein N-terminus Remorin_C PF03763.13 gi|156937231|ref|YP_001435027.1| - 4.4 7.2 14.5 6.6 6.7 3.3 2.4 1 1 1 2 2 2 0 Remorin, C-terminal region MtrG PF04210.13 gi|156937231|ref|YP_001435027.1| - 4.5 7.2 13.5 15 5.6 0.2 4.3 1 1 2 3 3 3 0 Tetrahydromethanopterin S-methyltransferase, subunit G Syntaxin_2 PF14523.6 gi|156937231|ref|YP_001435027.1| - 4.8 7.6 16.1 2.8 8.4 2.6 3.2 1 1 1 2 2 2 0 Syntaxin-like protein UPF0242 PF06785.11 gi|156937231|ref|YP_001435027.1| - 5.1 7.2 17.6 9.9 6.2 17.6 1.4 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus XhlA PF10779.9 gi|156937231|ref|YP_001435027.1| - 5.6 7.2 24.4 1.1 9.5 1.2 3.4 1 1 2 3 3 3 0 Haemolysin XhlA LidA_Long_CC PF18641.1 gi|156937231|ref|YP_001435027.1| - 5.7 7.0 13.8 3.7e+03 -2.2 13.8 2.8 1 1 0 1 1 0 0 LidA long coiled-coil domain FemAB PF02388.16 gi|156937231|ref|YP_001435027.1| - 5.8 5.7 8.0 5.6 5.7 6.4 1.7 1 1 1 2 2 2 0 FemAB family KID PF02524.14 gi|156937231|ref|YP_001435027.1| - 5.9 7.4 5.9 7.2 7.2 0.0 4.0 4 0 0 4 4 1 0 KID repeat DUF2205 PF10224.9 gi|156937231|ref|YP_001435027.1| - 8.7 6.4 17.2 59 3.8 2.1 3.2 1 1 2 3 3 3 0 Short coiled-coil protein ACCA PF03255.14 gi|156937231|ref|YP_001435027.1| - 8.9 6.2 10.7 5.1 7.0 1.9 2.3 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DUF5446 PF17522.2 gi|156937231|ref|YP_001435027.1| - 9.5 6.5 19.3 11 6.2 7.1 3.3 1 1 2 3 3 3 0 Family of unknown function (DUF5446) Macro PF01661.21 gi|156937232|ref|YP_001435028.1| - 1.6e-29 102.4 0.2 2.3e-29 101.8 0.2 1.2 1 0 0 1 1 1 1 Macro domain TGT PF01702.18 gi|156937232|ref|YP_001435028.1| - 0.22 10.7 0.0 0.27 10.3 0.0 1.2 1 0 0 1 1 1 0 Queuine tRNA-ribosyltransferase PEP-CTERM PF07589.11 gi|156937232|ref|YP_001435028.1| - 3.7 7.8 5.5 1.3 9.3 0.3 2.2 2 0 0 2 2 2 0 PEP-CTERM motif Exosortase_EpsH PF09721.10 gi|156937233|ref|YP_001435029.1| - 0.001 18.7 12.5 0.0015 18.1 12.5 1.3 1 0 0 1 1 1 1 Transmembrane exosortase (Exosortase_EpsH) Glycos_transf_2 PF00535.26 gi|156937234|ref|YP_001435030.1| - 4.8e-32 111.1 0.0 6.8e-32 110.6 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 GtrA PF04138.14 gi|156937234|ref|YP_001435030.1| - 2.5e-20 72.9 5.9 3.8e-20 72.3 5.9 1.3 1 0 0 1 1 1 1 GtrA-like protein Glyco_tranf_2_3 PF13641.6 gi|156937234|ref|YP_001435030.1| - 5.7e-14 52.6 0.0 8.6e-14 52.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|156937234|ref|YP_001435030.1| - 5.9e-05 22.7 0.0 7.7e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|156937234|ref|YP_001435030.1| - 0.0013 18.2 0.1 0.0046 16.5 0.0 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 21 CofC PF01983.16 gi|156937234|ref|YP_001435030.1| - 0.021 14.0 0.1 0.031 13.4 0.1 1.2 1 0 0 1 1 1 0 Guanylyl transferase CofC like Glyco_tranf_2_4 PF13704.6 gi|156937234|ref|YP_001435030.1| - 0.14 12.7 0.0 0.3 11.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyl transferase family 2 HEAT_EZ PF13513.6 gi|156937234|ref|YP_001435030.1| - 0.16 12.5 1.0 0.69 10.5 0.0 2.5 2 0 0 2 2 2 0 HEAT-like repeat Glyco_transf_7N PF13733.6 gi|156937234|ref|YP_001435030.1| - 0.22 11.2 0.0 0.35 10.5 0.0 1.3 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 SQHop_cyclase_C PF13243.6 gi|156937235|ref|YP_001435031.1| - 3.8e-14 52.5 1.0 0.0012 18.0 0.0 3.7 2 2 1 3 3 3 3 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 gi|156937235|ref|YP_001435031.1| - 3.1e-07 29.8 0.6 0.019 14.1 0.0 3.6 2 1 1 4 4 4 2 Squalene-hopene cyclase N-terminal domain Prenyltrans PF00432.21 gi|156937235|ref|YP_001435031.1| - 1.8e-06 27.5 6.7 0.017 14.9 0.1 5.4 5 0 0 5 5 5 2 Prenyltransferase and squalene oxidase repeat Pec_lyase PF09492.10 gi|156937235|ref|YP_001435031.1| - 0.00092 18.6 0.0 0.022 14.1 0.0 2.7 3 0 0 3 3 3 1 Pectic acid lyase TED_complement PF07678.14 gi|156937235|ref|YP_001435031.1| - 0.043 12.8 0.4 0.66 8.9 0.0 2.9 3 1 0 3 3 3 0 A-macroglobulin TED domain DUF1297 PF06973.12 gi|156937236|ref|YP_001435032.1| - 1.7e-67 226.6 0.0 2.4e-67 226.1 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|156937236|ref|YP_001435032.1| - 5.2e-46 155.6 0.0 7.1e-46 155.1 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) RimK PF08443.11 gi|156937236|ref|YP_001435032.1| - 0.071 12.7 0.0 0.22 11.1 0.0 1.8 1 1 0 1 1 1 0 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|156937236|ref|YP_001435032.1| - 0.16 12.0 0.0 0.35 10.9 0.0 1.5 2 0 0 2 2 2 0 ATP-grasp domain Sm_multidrug_ex PF06695.11 gi|156937237|ref|YP_001435033.1| - 2.1e-26 92.9 0.8 2.6e-26 92.6 0.8 1.1 1 0 0 1 1 1 1 Putative small multi-drug export protein CBS PF00571.28 gi|156937238|ref|YP_001435034.1| - 3.6e-11 43.3 0.2 3.8e-05 24.0 0.0 2.1 2 0 0 2 2 2 2 CBS domain Fer2_3 PF13085.6 gi|156937239|ref|YP_001435035.1| - 6.9e-34 116.1 0.0 1.3e-33 115.3 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|156937239|ref|YP_001435035.1| - 3.9e-10 40.0 4.7 3.9e-10 40.0 4.7 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|156937239|ref|YP_001435035.1| - 7.3e-06 26.4 4.4 7.3e-06 26.4 4.4 2.0 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156937239|ref|YP_001435035.1| - 1e-05 26.0 7.8 1e-05 26.0 7.8 2.6 2 2 1 3 3 2 1 4Fe-4S dicluster domain Fer2_4 PF13510.6 gi|156937239|ref|YP_001435035.1| - 1.8e-05 24.7 0.3 5.5e-05 23.1 0.3 1.8 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_9 PF13187.6 gi|156937239|ref|YP_001435035.1| - 0.00019 21.5 14.1 0.0041 17.3 12.4 2.9 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937239|ref|YP_001435035.1| - 0.00044 21.1 7.7 0.00044 21.1 7.7 2.8 2 2 2 4 4 4 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|156937239|ref|YP_001435035.1| - 0.00046 20.3 10.6 0.01 16.0 1.5 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156937239|ref|YP_001435035.1| - 0.0012 18.9 15.1 0.003 17.7 11.3 2.8 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156937239|ref|YP_001435035.1| - 0.0027 17.7 17.0 0.017 15.2 2.2 3.3 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156937239|ref|YP_001435035.1| - 0.0035 17.7 8.6 0.08 13.5 1.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer2 PF00111.27 gi|156937239|ref|YP_001435035.1| - 0.011 15.6 0.2 0.011 15.6 0.2 2.1 2 0 0 2 2 1 0 2Fe-2S iron-sulfur cluster binding domain zf-C2H2_11 PF16622.5 gi|156937239|ref|YP_001435035.1| - 0.024 14.4 2.0 0.024 14.4 2.0 2.6 2 0 0 2 2 2 0 zinc-finger C2H2-type Fer4_18 PF13746.6 gi|156937239|ref|YP_001435035.1| - 0.03 14.5 5.7 1.6 9.0 0.9 2.6 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|156937239|ref|YP_001435035.1| - 0.066 13.8 7.7 2.6 8.7 0.1 2.8 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4 PF00037.27 gi|156937239|ref|YP_001435035.1| - 0.8 9.6 22.7 0.16 11.8 3.1 3.2 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|156937239|ref|YP_001435035.1| - 0.84 10.5 10.9 2.1 9.2 0.2 2.8 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937239|ref|YP_001435035.1| - 6.9 6.9 20.2 0.13 12.4 1.5 3.4 3 0 0 3 3 3 0 4Fe-4S binding domain DUF123 PF01986.16 gi|156937240|ref|YP_001435036.1| - 2.3e-19 69.7 0.0 3.1e-19 69.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 Aldo_ket_red PF00248.21 gi|156937242|ref|YP_001435038.1| - 5.4e-37 127.6 0.0 2.5e-29 102.4 0.0 2.0 1 1 1 2 2 2 2 Aldo/keto reductase family HNH_repeat PF18780.1 gi|156937242|ref|YP_001435038.1| - 0.79 9.6 0.1 0.79 9.6 0.1 3.1 4 0 0 4 4 4 0 Homing endonuclease repeat THUMP PF02926.17 gi|156937243|ref|YP_001435039.1| - 3.7e-07 30.4 0.2 5.2e-07 29.9 0.2 1.1 1 0 0 1 1 1 1 THUMP domain GSG-1 PF07803.11 gi|156937244|ref|YP_001435040.1| - 0.014 15.3 0.0 0.015 15.2 0.0 1.1 1 0 0 1 1 1 0 GSG1-like protein Ribosomal_60s PF00428.19 gi|156937245|ref|YP_001435041.1| - 4.8e-19 68.7 22.4 5.9e-19 68.5 22.4 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein PepSY_2 PF13670.6 gi|156937245|ref|YP_001435041.1| - 0.0044 17.0 5.9 0.84 9.7 0.1 2.2 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain PhetRS_B1 PF18262.1 gi|156937245|ref|YP_001435041.1| - 0.017 15.3 1.2 0.042 14.1 0.0 1.9 2 0 0 2 2 2 0 Phe-tRNA synthetase beta subunit B1 domain TetR_C_31 PF17940.1 gi|156937245|ref|YP_001435041.1| - 0.028 14.6 1.5 0.041 14.1 1.5 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain PI31_Prot_N PF11566.8 gi|156937245|ref|YP_001435041.1| - 0.11 12.3 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 PI31 proteasome regulator N-terminal PPS_PS PF02006.16 gi|156937246|ref|YP_001435042.1| - 6.9e-73 243.9 0.7 8.9e-73 243.6 0.7 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase TPP_enzyme_M PF00205.22 gi|156937246|ref|YP_001435042.1| - 0.0002 21.1 0.6 0.011 15.4 0.2 2.6 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain DNA_photolyase PF00875.18 gi|156937246|ref|YP_001435042.1| - 0.017 15.2 0.0 0.028 14.4 0.0 1.4 1 0 0 1 1 1 0 DNA photolyase HEM4 PF02602.15 gi|156937246|ref|YP_001435042.1| - 0.035 13.5 0.4 0.072 12.4 0.4 1.5 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Met_10 PF02475.16 gi|156937246|ref|YP_001435042.1| - 0.077 12.7 0.1 0.22 11.2 0.0 1.8 2 0 0 2 2 2 0 Met-10+ like-protein Proteasome PF00227.26 gi|156937247|ref|YP_001435043.1| - 4.2e-57 192.7 0.0 5.4e-57 192.4 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|156937247|ref|YP_001435043.1| - 2.1e-14 52.8 2.6 5e-14 51.6 0.2 2.6 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SSF PF00474.17 gi|156937248|ref|YP_001435044.1| - 6e-70 236.2 27.1 1.5e-69 234.8 27.1 1.7 1 1 0 1 1 1 1 Sodium:solute symporter family Phage_holin_2_3 PF16080.5 gi|156937248|ref|YP_001435044.1| - 0.99 9.2 6.3 0.61 9.9 0.5 3.4 3 0 0 3 3 3 0 Bacteriophage holin family HP1 DUF485 PF04341.12 gi|156937249|ref|YP_001435045.1| - 2.3e-09 37.1 4.3 2.7e-09 36.9 4.3 1.0 1 0 0 1 1 1 1 Protein of unknown function, DUF485 Usp PF00582.26 gi|156937250|ref|YP_001435046.1| - 3.3e-33 115.2 2.2 4e-33 114.9 2.2 1.0 1 0 0 1 1 1 1 Universal stress protein family AP_endonuc_2 PF01261.24 gi|156937250|ref|YP_001435046.1| - 0.014 14.8 0.1 0.021 14.3 0.1 1.4 1 1 0 1 1 1 0 Xylose isomerase-like TIM barrel DXP_reductoisom PF02670.16 gi|156937250|ref|YP_001435046.1| - 0.016 16.0 1.5 0.021 15.5 1.3 1.3 1 1 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase DNA_photolyase PF00875.18 gi|156937250|ref|YP_001435046.1| - 0.12 12.4 0.0 0.17 11.9 0.0 1.1 1 0 0 1 1 1 0 DNA photolyase UbiA PF01040.18 gi|156937251|ref|YP_001435047.1| - 4.8e-41 140.7 17.4 4.8e-41 140.7 17.4 1.2 1 1 0 1 1 1 1 UbiA prenyltransferase family Anoctamin PF04547.12 gi|156937251|ref|YP_001435047.1| - 0.11 11.3 0.6 0.16 10.8 0.6 1.3 1 1 0 1 1 1 0 Calcium-activated chloride channel PAP2 PF01569.21 gi|156937251|ref|YP_001435047.1| - 0.23 11.2 9.5 0.048 13.4 1.9 2.7 1 1 2 3 3 3 0 PAP2 superfamily Radical_SAM PF04055.21 gi|156937252|ref|YP_001435048.1| - 6.6e-19 68.9 0.0 8.9e-19 68.5 0.0 1.1 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|156937252|ref|YP_001435048.1| - 1.7e-08 34.8 0.1 2.6e-08 34.2 0.1 1.3 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156937252|ref|YP_001435048.1| - 2.8e-06 27.4 0.1 5.9e-06 26.4 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain ComA PF02679.15 gi|156937252|ref|YP_001435048.1| - 0.074 12.5 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 (2R)-phospho-3-sulfolactate synthase (ComA) AhpC-TSA PF00578.21 gi|156937253|ref|YP_001435049.1| - 5.2e-33 113.6 0.0 7.2e-33 113.1 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|156937253|ref|YP_001435049.1| - 3e-16 59.4 0.0 4.1e-16 59.0 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|156937253|ref|YP_001435049.1| - 1.3e-13 50.5 0.2 3.1e-13 49.3 0.2 1.7 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin AhpC-TSA_2 PF13911.6 gi|156937253|ref|YP_001435049.1| - 0.037 14.1 0.0 0.06 13.5 0.0 1.4 1 1 0 1 1 1 0 AhpC/TSA antioxidant enzyme DUF5478 PF17572.2 gi|156937253|ref|YP_001435049.1| - 0.082 13.0 0.0 0.15 12.2 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5478) RAMPs PF03787.15 gi|156937254|ref|YP_001435050.1| - 1.5e-29 103.6 0.0 1.8e-29 103.3 0.0 1.1 1 0 0 1 1 1 1 RAMP superfamily Cas_Cmr5 PF09701.10 gi|156937255|ref|YP_001435051.1| - 7.2e-06 26.3 0.1 1.4e-05 25.4 0.1 1.4 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cmr5) YqhG PF11079.8 gi|156937255|ref|YP_001435051.1| - 0.034 13.1 0.0 0.054 12.5 0.0 1.2 1 0 0 1 1 1 0 Bacterial protein YqhG of unknown function RAMPs PF03787.15 gi|156937256|ref|YP_001435052.1| - 4.6e-08 33.4 0.1 9.1e-07 29.1 0.0 2.2 1 1 1 2 2 2 2 RAMP superfamily DUF3692 PF12469.8 gi|156937257|ref|YP_001435053.1| - 1.8e-22 79.6 0.0 5.8e-22 78.0 0.0 1.9 2 0 0 2 2 2 1 CRISPR-associated protein Cas_Cmr3 PF09700.10 gi|156937258|ref|YP_001435054.1| - 0.049 13.1 0.7 4.4 6.6 0.1 2.2 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_Cmr3) tRNA-synt_1f PF01921.18 gi|156937259|ref|YP_001435055.1| - 2.7e-94 316.1 0.1 4.9e-94 315.2 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 gi|156937259|ref|YP_001435055.1| - 0.00014 21.3 0.0 0.52 9.6 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain eIF-5_eIF-2B PF01873.17 gi|156937259|ref|YP_001435055.1| - 0.0011 18.8 0.5 0.0077 16.1 0.5 2.4 2 1 1 3 3 3 1 Domain found in IF2B/IF5 tRNA-synt_1g PF09334.11 gi|156937259|ref|YP_001435055.1| - 0.0017 17.2 0.0 0.023 13.5 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (M) YozD PF14162.6 gi|156937259|ref|YP_001435055.1| - 0.023 15.0 0.9 0.34 11.2 0.1 2.5 2 0 0 2 2 2 0 YozD-like protein HMG_box_5 PF14887.6 gi|156937259|ref|YP_001435055.1| - 0.03 14.3 0.1 0.062 13.3 0.1 1.5 1 0 0 1 1 1 0 HMG (high mobility group) box 5 Thioredoxin_5 PF13743.6 gi|156937259|ref|YP_001435055.1| - 0.091 12.4 0.1 10 5.8 0.1 2.3 2 0 0 2 2 2 0 Thioredoxin zinc_ribbon_10 PF10058.9 gi|156937259|ref|YP_001435055.1| - 0.2 11.4 1.3 0.44 10.3 1.3 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn-ribbon_8 PF09723.10 gi|156937259|ref|YP_001435055.1| - 2.6 8.2 4.5 3.6 7.8 0.6 2.4 1 1 1 2 2 2 0 Zinc ribbon domain GATase PF00117.28 gi|156937260|ref|YP_001435056.1| - 4.1e-41 140.8 0.0 4.8e-41 140.6 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|156937260|ref|YP_001435056.1| - 7.6e-19 68.3 0.0 2.9e-18 66.4 0.0 1.8 1 1 0 1 1 1 1 Peptidase C26 SNO PF01174.19 gi|156937260|ref|YP_001435056.1| - 0.0025 17.7 0.0 0.017 15.0 0.0 2.0 1 1 0 1 1 1 1 SNO glutamine amidotransferase family Cas_Cas4 PF01930.17 gi|156937261|ref|YP_001435057.1| - 5e-10 39.7 0.0 6.8e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|156937261|ref|YP_001435057.1| - 4.4e-09 36.6 6.9 0.00059 19.8 1.5 2.9 1 1 1 2 2 2 2 PD-(D/E)XK nuclease superfamily Lactamase_B PF00753.27 gi|156937262|ref|YP_001435058.1| - 2e-10 41.0 0.1 5.7e-10 39.5 0.1 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily ABC_tran PF00005.27 gi|156937264|ref|YP_001435060.1| - 3.1e-15 56.9 0.0 4e-15 56.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156937264|ref|YP_001435060.1| - 3.8e-06 26.9 0.6 7e-05 22.8 0.1 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156937264|ref|YP_001435060.1| - 8.8e-05 22.0 0.2 0.22 10.9 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|156937264|ref|YP_001435060.1| - 0.0034 17.2 0.0 0.005 16.6 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_23 PF13476.6 gi|156937264|ref|YP_001435060.1| - 0.004 17.7 0.0 0.0071 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|156937264|ref|YP_001435060.1| - 0.0076 16.0 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|156937264|ref|YP_001435060.1| - 0.032 14.6 0.0 0.046 14.1 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain T2SSE PF00437.20 gi|156937264|ref|YP_001435060.1| - 0.045 12.8 0.0 0.083 11.9 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 gi|156937264|ref|YP_001435060.1| - 0.13 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|156937264|ref|YP_001435060.1| - 0.13 12.2 0.1 0.91 9.4 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_18 PF13238.6 gi|156937264|ref|YP_001435060.1| - 0.13 12.8 0.5 1 9.9 0.5 2.1 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|156937264|ref|YP_001435060.1| - 0.26 11.6 0.4 1.6 9.1 0.4 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit PBP_like_2 PF12849.7 gi|156937266|ref|YP_001435062.1| - 5.3e-17 62.4 0.0 6.9e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_11 PF13531.6 gi|156937266|ref|YP_001435062.1| - 2.3e-05 24.3 0.0 4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|156937266|ref|YP_001435062.1| - 0.00027 20.1 0.0 0.00043 19.5 0.0 1.3 1 0 0 1 1 1 1 PBP superfamily domain GMAP PF06540.11 gi|156937266|ref|YP_001435062.1| - 0.036 14.1 0.3 0.27 11.3 0.0 2.3 2 0 0 2 2 2 0 Galanin message associated peptide (GMAP) TGBp3 PF02495.17 gi|156937266|ref|YP_001435062.1| - 0.12 12.1 0.9 16 5.2 0.0 2.3 2 0 0 2 2 2 0 Triple gene block 3 DUF1496 PF07383.12 gi|156937267|ref|YP_001435063.1| - 0.043 13.4 0.0 0.11 12.0 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1496) DUF4157 PF13699.6 gi|156937268|ref|YP_001435064.1| - 0.097 12.9 0.1 0.26 11.6 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4157) AMP-binding_C_2 PF14535.6 gi|156937269|ref|YP_001435065.1| - 1.7e-14 53.9 0.0 3.1e-14 53.0 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|156937269|ref|YP_001435065.1| - 0.018 13.7 1.5 0.046 12.3 1.5 1.6 1 1 0 1 1 1 0 AMP-binding enzyme HMG-CoA_red PF00368.18 gi|156937270|ref|YP_001435066.1| - 1.6e-132 442.0 0.4 1.8e-132 441.8 0.4 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase Exonuc_VII_S PF02609.16 gi|156937270|ref|YP_001435066.1| - 0.063 13.4 0.6 0.17 11.9 0.6 1.8 1 0 0 1 1 1 0 Exonuclease VII small subunit SAP30_Sin3_bdg PF13867.6 gi|156937270|ref|YP_001435066.1| - 0.13 12.7 0.1 0.29 11.5 0.1 1.6 1 0 0 1 1 1 0 Sin3 binding region of histone deacetylase complex subunit SAP30 PQQ_2 PF13360.6 gi|156937271|ref|YP_001435067.1| - 0.004 16.8 0.1 0.0076 15.9 0.1 1.4 1 1 0 1 1 1 1 PQQ-like domain PQQ_3 PF13570.6 gi|156937271|ref|YP_001435067.1| - 0.035 14.6 4.9 0.43 11.1 0.1 3.6 3 0 0 3 3 3 0 PQQ-like domain TGT PF01702.18 gi|156937272|ref|YP_001435068.1| - 2.1e-55 188.3 0.0 2.9e-55 187.8 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Glyco_hydro_3 PF00933.21 gi|156937272|ref|YP_001435068.1| - 0.086 12.2 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 N terminal domain FtsX PF02687.21 gi|156937273|ref|YP_001435069.1| - 2.9e-15 56.5 0.7 2.9e-15 56.5 0.7 3.1 3 1 0 3 3 3 1 FtsX-like permease family MacB_PCD PF12704.7 gi|156937273|ref|YP_001435069.1| - 1.2e-12 48.6 1.8 1.2e-12 48.6 1.8 1.8 2 1 0 2 2 2 1 MacB-like periplasmic core domain LptF_LptG PF03739.14 gi|156937273|ref|YP_001435069.1| - 0.0021 17.0 3.5 0.0048 15.8 3.1 1.8 1 1 1 2 2 2 1 Lipopolysaccharide export system permease LptF/LptG Polysacc_synt_C PF14667.6 gi|156937273|ref|YP_001435069.1| - 0.29 11.2 12.5 0.052 13.6 7.1 2.2 2 1 0 2 2 2 0 Polysaccharide biosynthesis C-terminal domain NPCBM_assoc PF10633.9 gi|156937274|ref|YP_001435070.1| - 6.3e-15 55.2 4.4 0.0016 18.6 0.0 7.0 5 2 0 5 5 5 3 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|156937274|ref|YP_001435070.1| - 3.3e-14 53.0 0.0 0.038 14.2 0.0 5.6 5 0 0 5 5 5 3 CARDB DUF4352 PF11611.8 gi|156937274|ref|YP_001435070.1| - 0.002 18.4 0.0 0.56 10.5 0.0 3.5 3 0 0 3 3 3 1 Domain of unknown function (DUF4352) TRAP_beta PF05753.14 gi|156937274|ref|YP_001435070.1| - 0.054 12.9 0.0 3.9 6.8 0.0 3.1 3 0 0 3 3 3 0 Translocon-associated protein beta (TRAPB) BatA PF07584.11 gi|156937274|ref|YP_001435070.1| - 0.063 13.7 0.5 0.18 12.2 0.2 1.9 2 0 0 2 2 2 0 Aerotolerance regulator N-terminal Mrr_cat PF04471.12 gi|156937275|ref|YP_001435071.1| - 3e-05 24.0 0.1 0.0002 21.3 0.0 2.0 2 0 0 2 2 2 1 Restriction endonuclease UPF0102 PF02021.17 gi|156937275|ref|YP_001435071.1| - 0.0064 16.7 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 Coatomer_WDAD PF04053.14 gi|156937276|ref|YP_001435072.1| - 0.0026 16.9 0.2 0.0041 16.2 0.2 1.4 1 0 0 1 1 1 1 Coatomer WD associated region NAD_binding_7 PF13241.6 gi|156937277|ref|YP_001435073.1| - 9.7e-26 90.2 0.5 1.7e-25 89.4 0.5 1.4 1 0 0 1 1 1 1 Putative NAD(P)-binding TrkA_N PF02254.18 gi|156937277|ref|YP_001435073.1| - 4.4e-07 30.2 1.1 6.7e-07 29.6 1.1 1.3 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_10 PF13460.6 gi|156937277|ref|YP_001435073.1| - 8.5e-07 29.0 0.5 1.4e-06 28.3 0.5 1.3 1 0 0 1 1 1 1 NAD(P)H-binding 2-Hacid_dh_C PF02826.19 gi|156937277|ref|YP_001435073.1| - 2.8e-05 23.5 0.0 5.6e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NmrA PF05368.13 gi|156937277|ref|YP_001435073.1| - 3.5e-05 23.5 0.5 5.4e-05 22.9 0.5 1.2 1 0 0 1 1 1 1 NmrA-like family Shikimate_DH PF01488.20 gi|156937277|ref|YP_001435073.1| - 4.2e-05 23.6 0.1 0.00011 22.3 0.1 1.7 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase AlaDh_PNT_C PF01262.21 gi|156937277|ref|YP_001435073.1| - 8.7e-05 21.9 0.1 0.00015 21.1 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain DFP PF04127.15 gi|156937277|ref|YP_001435073.1| - 0.00047 20.0 0.1 0.00091 19.1 0.1 1.5 1 1 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein ThiF PF00899.21 gi|156937277|ref|YP_001435073.1| - 0.00099 18.5 3.3 0.005 16.2 0.4 2.6 1 1 2 3 3 3 1 ThiF family 3HCDH_N PF02737.18 gi|156937277|ref|YP_001435073.1| - 0.0034 17.3 2.2 0.017 15.0 0.2 2.3 1 1 1 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|156937277|ref|YP_001435073.1| - 0.011 16.3 0.6 0.031 14.9 0.3 1.9 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Sacchrp_dh_NADP PF03435.18 gi|156937277|ref|YP_001435073.1| - 0.015 15.6 0.5 0.037 14.3 0.3 1.7 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 gi|156937277|ref|YP_001435073.1| - 0.017 15.5 0.5 0.048 14.1 0.3 1.9 1 1 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain CysG_dimeriser PF10414.9 gi|156937277|ref|YP_001435073.1| - 0.018 14.8 0.4 0.042 13.6 0.4 1.6 1 0 0 1 1 1 0 Sirohaem synthase dimerisation region Translat_reg PF01818.17 gi|156937277|ref|YP_001435073.1| - 0.018 15.0 1.3 0.031 14.2 0.3 1.9 2 0 0 2 2 2 0 Bacteriophage translational regulator UDPG_MGDP_dh_C PF03720.15 gi|156937277|ref|YP_001435073.1| - 0.021 15.3 0.3 0.042 14.3 0.3 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AdoHcyase_NAD PF00670.21 gi|156937277|ref|YP_001435073.1| - 0.026 14.6 1.1 0.062 13.4 1.1 1.7 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|156937277|ref|YP_001435073.1| - 0.035 14.1 0.5 0.22 11.5 0.5 2.0 1 1 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|156937277|ref|YP_001435073.1| - 0.069 13.7 2.4 0.1 13.2 0.3 2.3 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase XdhC_C PF13478.6 gi|156937277|ref|YP_001435073.1| - 0.074 13.6 0.0 0.19 12.2 0.0 1.7 2 0 0 2 2 2 0 XdhC Rossmann domain Pyr_redox_2 PF07992.14 gi|156937277|ref|YP_001435073.1| - 0.076 12.2 0.2 0.15 11.2 0.2 1.4 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FGase PF05013.12 gi|156937277|ref|YP_001435073.1| - 0.076 13.2 0.1 8.8 6.5 0.0 2.2 1 1 1 2 2 2 0 N-formylglutamate amidohydrolase NAD_binding_2 PF03446.15 gi|156937277|ref|YP_001435073.1| - 0.11 12.6 0.2 0.19 11.9 0.2 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase Rossmann-like PF10727.9 gi|156937277|ref|YP_001435073.1| - 0.14 12.0 0.6 0.64 9.9 0.2 2.3 2 1 0 2 2 2 0 Rossmann-like domain GFO_IDH_MocA PF01408.22 gi|156937277|ref|YP_001435073.1| - 0.15 12.9 0.4 0.87 10.4 0.3 2.3 2 1 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold PTS_2-RNA PF01885.16 gi|156937278|ref|YP_001435074.1| - 3.2e-25 89.2 0.1 3.8e-25 89.0 0.1 1.0 1 0 0 1 1 1 1 RNA 2'-phosphotransferase, Tpt1 / KptA family OST-HTH PF12872.7 gi|156937278|ref|YP_001435074.1| - 0.0027 17.5 0.0 0.0092 15.8 0.0 1.8 1 1 1 2 2 2 1 OST-HTH/LOTUS domain PARP PF00644.20 gi|156937278|ref|YP_001435074.1| - 0.0071 15.9 0.0 0.0098 15.5 0.0 1.2 1 0 0 1 1 1 1 Poly(ADP-ribose) polymerase catalytic domain Thg1 PF04446.12 gi|156937279|ref|YP_001435075.1| - 6.1e-17 61.8 0.0 9.7e-17 61.2 0.0 1.2 1 0 0 1 1 1 1 tRNAHis guanylyltransferase HTH_3 PF01381.22 gi|156937280|ref|YP_001435076.1| - 1.2e-11 44.5 0.5 1.9e-11 43.8 0.5 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|156937280|ref|YP_001435076.1| - 1.6e-08 34.8 1.6 2.4e-08 34.2 1.6 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|156937280|ref|YP_001435076.1| - 5.9e-06 26.2 1.0 9.8e-06 25.5 1.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|156937280|ref|YP_001435076.1| - 0.0024 18.0 1.2 0.013 15.6 0.1 2.0 1 1 1 2 2 2 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA Sgf11 PF08209.11 gi|156937280|ref|YP_001435076.1| - 0.03 13.9 0.6 3.3 7.4 0.1 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) DZR PF12773.7 gi|156937280|ref|YP_001435076.1| - 0.13 12.3 0.2 0.21 11.6 0.2 1.3 1 0 0 1 1 1 0 Double zinc ribbon zf-C3HC PF07967.13 gi|156937280|ref|YP_001435076.1| - 0.13 12.3 0.3 1.6 8.8 0.0 2.1 1 1 1 2 2 2 0 C3HC zinc finger-like Radical_SAM PF04055.21 gi|156937281|ref|YP_001435077.1| - 4.4e-26 92.2 0.0 2e-25 90.1 0.0 2.0 1 1 1 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|156937281|ref|YP_001435077.1| - 1.4e-11 44.7 0.1 4.8e-11 43.0 0.1 1.9 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|156937281|ref|YP_001435077.1| - 1.1e-08 35.5 0.0 2.8e-08 34.1 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156937281|ref|YP_001435077.1| - 1.2e-08 35.1 0.0 2.6e-08 34.0 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain HMGL-like PF00682.19 gi|156937281|ref|YP_001435077.1| - 4.1e-05 23.3 0.0 8.2e-05 22.3 0.0 1.5 1 1 0 1 1 1 1 HMGL-like AP_endonuc_2 PF01261.24 gi|156937281|ref|YP_001435077.1| - 4.8e-05 22.9 0.0 0.00019 21.0 0.0 2.1 1 1 0 1 1 1 1 Xylose isomerase-like TIM barrel HTH_22 PF13309.6 gi|156937281|ref|YP_001435077.1| - 0.03 14.4 0.0 0.099 12.7 0.0 1.9 1 0 0 1 1 1 0 HTH domain Radical_SAM PF04055.21 gi|156937282|ref|YP_001435078.1| - 8.5e-13 49.0 0.0 1.5e-12 48.2 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|156937282|ref|YP_001435078.1| - 3.1e-07 30.7 0.0 6.8e-07 29.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156937282|ref|YP_001435078.1| - 0.0021 18.2 0.0 0.0047 17.1 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Hydrolase_4 PF12146.8 gi|156937283|ref|YP_001435079.1| - 1.1e-11 44.5 0.2 3.4e-07 29.8 0.0 2.2 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 gi|156937283|ref|YP_001435079.1| - 1e-08 34.9 0.0 1.3e-08 34.6 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_4 PF08386.10 gi|156937283|ref|YP_001435079.1| - 1.6e-07 31.4 0.0 2.4e-07 30.8 0.0 1.3 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_1 PF00561.20 gi|156937283|ref|YP_001435079.1| - 5.2e-07 29.6 0.0 0.002 17.8 0.0 2.1 1 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|156937283|ref|YP_001435079.1| - 6.9e-06 26.8 0.7 0.004 17.8 0.3 2.2 1 1 1 2 2 2 2 Alpha/beta hydrolase family UPF0227 PF05728.12 gi|156937283|ref|YP_001435079.1| - 3e-05 24.0 0.0 6e-05 23.1 0.0 1.4 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0227) Abhydrolase_2 PF02230.16 gi|156937283|ref|YP_001435079.1| - 0.00016 21.5 0.9 0.016 15.0 0.1 2.9 2 1 1 3 3 3 1 Phospholipase/Carboxylesterase DLH PF01738.18 gi|156937283|ref|YP_001435079.1| - 0.00045 19.8 0.0 0.0061 16.1 0.0 2.0 1 1 0 1 1 1 1 Dienelactone hydrolase family FSH1 PF03959.13 gi|156937283|ref|YP_001435079.1| - 0.0011 18.7 0.1 0.0019 17.9 0.1 1.7 1 1 0 1 1 1 1 Serine hydrolase (FSH1) Abhydrolase_5 PF12695.7 gi|156937283|ref|YP_001435079.1| - 0.0013 18.6 0.0 0.81 9.4 0.0 2.1 2 0 0 2 2 2 2 Alpha/beta hydrolase family Lipase_3 PF01764.25 gi|156937283|ref|YP_001435079.1| - 0.01 15.7 0.1 0.035 14.0 0.0 1.8 2 0 0 2 2 2 0 Lipase (class 3) DUF2048 PF09752.9 gi|156937283|ref|YP_001435079.1| - 0.12 11.5 1.5 1.5 7.8 0.0 2.0 1 1 0 2 2 2 0 Abhydrolase domain containing 18 BAAT_C PF08840.11 gi|156937283|ref|YP_001435079.1| - 0.17 11.8 0.1 0.45 10.4 0.1 1.7 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal AIRS_C PF02769.22 gi|156937284|ref|YP_001435080.1| - 9.2e-28 97.3 0.7 1.2e-27 96.9 0.7 1.2 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|156937284|ref|YP_001435080.1| - 1.7e-17 63.9 0.3 4.4e-17 62.5 0.3 1.7 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Coatomer_g_Cpla PF16381.5 gi|156937284|ref|YP_001435080.1| - 0.035 14.2 0.0 6 7.0 0.0 2.3 2 0 0 2 2 2 0 Coatomer subunit gamma-1 C-terminal appendage platform TPR_10 PF13374.6 gi|156937284|ref|YP_001435080.1| - 0.61 10.0 1.8 2.4 8.1 0.0 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat ABC_ATPase PF09818.9 gi|156937286|ref|YP_001435082.1| - 1.6e-146 488.7 0.0 2.1e-146 488.2 0.0 1.1 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 gi|156937286|ref|YP_001435082.1| - 0.0047 17.4 0.0 0.0047 17.4 0.0 1.6 2 0 0 2 2 2 1 AAA domain VitD-bind_III PF09164.10 gi|156937286|ref|YP_001435082.1| - 0.21 11.6 0.9 0.66 10.0 0.2 2.1 2 0 0 2 2 2 0 Vitamin D binding protein, domain III Lar_restr_allev PF14354.6 gi|156937287|ref|YP_001435083.1| - 0.00038 20.8 0.7 1 9.8 0.1 2.2 2 0 0 2 2 2 2 Restriction alleviation protein Lar TFIIS_C PF01096.18 gi|156937287|ref|YP_001435083.1| - 0.0029 17.4 1.7 0.7 9.8 0.1 2.2 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) HypA PF01155.19 gi|156937287|ref|YP_001435083.1| - 0.0031 17.5 0.0 0.0038 17.2 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_13 PF09855.9 gi|156937287|ref|YP_001435083.1| - 0.0071 16.5 0.8 0.11 12.7 0.1 2.2 2 0 0 2 2 2 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Gram_pos_anchor PF00746.21 gi|156937287|ref|YP_001435083.1| - 0.0075 16.2 1.1 0.01 15.7 1.1 1.2 1 0 0 1 1 1 1 LPXTG cell wall anchor motif DUF2752 PF10825.8 gi|156937287|ref|YP_001435083.1| - 0.012 15.7 6.5 0.13 12.3 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) HTH_OrfB_IS605 PF12323.8 gi|156937287|ref|YP_001435083.1| - 0.02 14.4 0.0 0.038 13.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DZR PF12773.7 gi|156937287|ref|YP_001435083.1| - 0.026 14.6 0.6 0.053 13.5 0.6 1.5 1 1 0 1 1 1 0 Double zinc ribbon zf-ISL3 PF14690.6 gi|156937287|ref|YP_001435083.1| - 0.036 14.7 0.6 6.9 7.4 0.1 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-C4_Topoisom PF01396.19 gi|156937287|ref|YP_001435083.1| - 0.039 13.7 4.6 1.4 8.8 0.3 2.5 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Zn_Tnp_IS1595 PF12760.7 gi|156937287|ref|YP_001435083.1| - 0.039 13.9 5.8 1.4 9.0 0.6 2.2 1 1 1 2 2 2 0 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|156937287|ref|YP_001435083.1| - 0.041 13.8 3.2 0.13 12.2 3.2 1.8 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Nudix_N_2 PF14803.6 gi|156937287|ref|YP_001435083.1| - 0.048 13.6 0.7 8.8 6.4 0.1 2.2 2 0 0 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.10 gi|156937287|ref|YP_001435083.1| - 0.054 13.6 4.1 0.21 11.8 3.9 1.9 1 1 1 2 2 2 0 Zinc ribbon domain DUF3797 PF12677.7 gi|156937287|ref|YP_001435083.1| - 0.06 13.2 2.6 1.5 8.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) zf-CSL PF05207.13 gi|156937287|ref|YP_001435083.1| - 0.061 13.0 0.2 2.6 7.8 0.0 2.1 2 0 0 2 2 2 0 CSL zinc finger DUF1610 PF07754.11 gi|156937287|ref|YP_001435083.1| - 0.062 13.3 7.9 0.76 9.8 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf_Rg PF17915.1 gi|156937287|ref|YP_001435083.1| - 0.072 12.5 1.9 5.4 6.5 0.1 2.2 2 0 0 2 2 2 0 Reverse gyrase zinc finger RNA_POL_M_15KD PF02150.16 gi|156937287|ref|YP_001435083.1| - 0.079 12.9 5.4 0.26 11.2 0.8 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit Mu-like_Com PF10122.9 gi|156937287|ref|YP_001435083.1| - 0.12 11.8 0.2 9.4 5.8 0.1 2.2 2 0 0 2 2 2 0 Mu-like prophage protein Com zinc_ribbon_2 PF13240.6 gi|156937287|ref|YP_001435083.1| - 0.14 11.9 8.4 0.29 10.9 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|156937287|ref|YP_001435083.1| - 0.16 11.5 5.9 6.3 6.4 2.5 2.5 2 1 0 2 2 2 0 TFIIB zinc-binding Prim_Zn_Ribbon PF08273.12 gi|156937287|ref|YP_001435083.1| - 0.17 12.2 9.1 2.7 8.4 0.3 2.2 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase zf-ribbon_3 PF13248.6 gi|156937287|ref|YP_001435083.1| - 0.24 10.9 0.3 0.24 10.9 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-RING_7 PF02591.15 gi|156937287|ref|YP_001435083.1| - 0.24 11.6 0.0 0.24 11.6 0.0 2.1 2 0 0 2 2 2 0 C4-type zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|156937287|ref|YP_001435083.1| - 0.37 10.8 3.0 7.7 6.6 0.2 2.3 2 0 0 2 2 2 0 PhnA Zinc-Ribbon UPF0547 PF10571.9 gi|156937287|ref|YP_001435083.1| - 0.56 10.3 0.1 0.56 10.3 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 Anti-TRAP PF15777.5 gi|156937287|ref|YP_001435083.1| - 0.84 9.6 5.6 8 6.5 5.7 2.1 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein zf-NADH-PPase PF09297.11 gi|156937287|ref|YP_001435083.1| - 1.3 8.7 4.3 5.3 6.8 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain zf-tcix PF14952.6 gi|156937287|ref|YP_001435083.1| - 2.5 7.8 7.1 3.7 7.2 0.1 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding zf-TFIIB PF13453.6 gi|156937287|ref|YP_001435083.1| - 4.4 6.7 6.9 28 4.1 0.6 2.0 1 1 1 2 2 2 0 Transcription factor zinc-finger HTH_24 PF13412.6 gi|156937288|ref|YP_001435084.1| - 1.4e-15 56.5 0.3 2.7e-15 55.7 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|156937288|ref|YP_001435084.1| - 3.1e-15 55.7 0.1 4.4e-15 55.2 0.1 1.2 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|156937288|ref|YP_001435084.1| - 5.1e-15 55.2 0.1 8.2e-15 54.5 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_5 PF01022.20 gi|156937288|ref|YP_001435084.1| - 6.2e-07 29.2 0.1 1.4e-06 28.0 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|156937288|ref|YP_001435084.1| - 6.4e-07 29.2 0.2 1.3e-06 28.2 0.0 1.6 2 0 0 2 2 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|156937288|ref|YP_001435084.1| - 1.7e-06 27.8 0.0 6e-06 26.0 0.0 1.9 2 0 0 2 2 2 1 MarR family HTH_23 PF13384.6 gi|156937288|ref|YP_001435084.1| - 4.1e-06 26.4 0.0 8.7e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain MarR PF01047.22 gi|156937288|ref|YP_001435084.1| - 9.2e-06 25.5 0.1 1.8e-05 24.6 0.1 1.5 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|156937288|ref|YP_001435084.1| - 1.4e-05 24.9 0.3 4.2e-05 23.4 0.0 1.9 2 0 0 2 2 1 1 HTH domain Sigma70_r4_2 PF08281.12 gi|156937288|ref|YP_001435084.1| - 1.6e-05 24.5 0.2 0.00048 19.7 0.0 2.4 2 1 0 2 2 2 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|156937288|ref|YP_001435084.1| - 3.6e-05 23.4 0.2 9.6e-05 22.1 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|156937288|ref|YP_001435084.1| - 3.8e-05 23.4 0.0 6.4e-05 22.7 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain Fe_dep_repress PF01325.19 gi|156937288|ref|YP_001435084.1| - 7.9e-05 22.8 0.3 0.00017 21.7 0.1 1.7 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain GerE PF00196.19 gi|156937288|ref|YP_001435084.1| - 0.00012 21.6 0.0 0.00021 20.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_Tnp_ISL3 PF13542.6 gi|156937288|ref|YP_001435084.1| - 0.00019 20.8 0.0 0.00041 19.7 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_20 PF12840.7 gi|156937288|ref|YP_001435084.1| - 0.00022 21.2 0.0 0.00039 20.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain LexA_DNA_bind PF01726.16 gi|156937288|ref|YP_001435084.1| - 0.0003 20.5 0.0 0.00064 19.4 0.0 1.6 1 0 0 1 1 1 1 LexA DNA binding domain HTH_10 PF04967.12 gi|156937288|ref|YP_001435084.1| - 0.00095 18.9 0.0 0.0021 17.8 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain Mga PF05043.13 gi|156937288|ref|YP_001435084.1| - 0.0014 19.2 0.1 0.016 15.7 0.0 2.2 2 0 0 2 2 2 1 Mga helix-turn-helix domain HTH_28 PF13518.6 gi|156937288|ref|YP_001435084.1| - 0.0015 18.6 0.0 0.0023 18.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|156937288|ref|YP_001435084.1| - 0.0019 18.2 0.0 0.0036 17.3 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn helix HTH_9 PF08221.11 gi|156937288|ref|YP_001435084.1| - 0.0023 18.0 0.1 0.011 15.8 0.0 2.0 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_7 PF02796.15 gi|156937288|ref|YP_001435084.1| - 0.0038 17.3 0.0 0.09 12.9 0.0 2.6 1 1 1 2 2 2 1 Helix-turn-helix domain of resolvase SpoIIID PF12116.8 gi|156937288|ref|YP_001435084.1| - 0.0039 17.2 0.7 0.012 15.7 0.0 2.1 3 0 0 3 3 2 1 Stage III sporulation protein D HTH_40 PF14493.6 gi|156937288|ref|YP_001435084.1| - 0.0067 16.9 0.5 0.019 15.4 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_8 PF02954.19 gi|156937288|ref|YP_001435084.1| - 0.0084 15.9 0.1 0.018 14.8 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_30 PF13556.6 gi|156937288|ref|YP_001435084.1| - 0.01 15.6 0.0 0.017 14.9 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_27 PF13463.6 gi|156937288|ref|YP_001435084.1| - 0.014 15.9 0.0 0.03 14.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_DeoR PF08220.12 gi|156937288|ref|YP_001435084.1| - 0.017 14.8 0.0 0.043 13.6 0.0 1.7 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_50 PF18024.1 gi|156937288|ref|YP_001435084.1| - 0.018 14.6 0.0 0.041 13.5 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain RuvB_C PF05491.13 gi|156937288|ref|YP_001435084.1| - 0.022 14.6 0.0 0.046 13.6 0.0 1.5 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain HTH_22 PF13309.6 gi|156937288|ref|YP_001435084.1| - 0.025 14.7 0.0 0.082 13.0 0.0 1.8 2 0 0 2 2 2 0 HTH domain Sigma70_r4 PF04545.16 gi|156937288|ref|YP_001435084.1| - 0.026 14.0 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 gi|156937288|ref|YP_001435084.1| - 0.028 14.7 0.0 2.3 8.6 0.0 2.2 2 0 0 2 2 2 0 Transposase IF2_N PF04760.15 gi|156937288|ref|YP_001435084.1| - 0.029 14.2 0.0 0.094 12.6 0.0 1.9 1 0 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region DUF2089 PF09862.9 gi|156937288|ref|YP_001435084.1| - 0.03 14.4 0.2 0.12 12.4 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2089) HTH_Crp_2 PF13545.6 gi|156937288|ref|YP_001435084.1| - 0.039 13.9 0.0 0.075 13.0 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain FeoC PF09012.10 gi|156937288|ref|YP_001435084.1| - 0.042 13.9 0.0 0.085 12.9 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator Dabb PF07876.12 gi|156937288|ref|YP_001435084.1| - 0.047 14.3 0.1 0.14 12.8 0.1 1.8 2 0 0 2 2 1 0 Stress responsive A/B Barrel Domain Terminase_5 PF06056.12 gi|156937288|ref|YP_001435084.1| - 0.065 13.1 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) Rrf2 PF02082.20 gi|156937288|ref|YP_001435084.1| - 0.077 13.3 0.0 0.23 11.8 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator HTH_6 PF01418.17 gi|156937288|ref|YP_001435084.1| - 0.083 12.9 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family TetR_N PF00440.23 gi|156937288|ref|YP_001435084.1| - 0.11 12.3 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, tetR family HTH_Tnp_Tc3_2 PF01498.18 gi|156937288|ref|YP_001435084.1| - 0.15 12.4 0.0 0.28 11.5 0.0 1.5 1 0 0 1 1 1 0 Transposase TnsD PF15978.5 gi|156937288|ref|YP_001435084.1| - 0.16 10.9 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D Pribosyltran PF00156.27 gi|156937289|ref|YP_001435085.1| - 8.3e-18 64.4 0.1 1.3e-17 63.8 0.1 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|156937289|ref|YP_001435085.1| - 0.0013 18.2 0.0 0.0018 17.8 0.0 1.2 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|156937289|ref|YP_001435085.1| - 0.0085 15.6 0.1 0.015 14.8 0.0 1.4 1 1 0 1 1 1 1 Phosphoribosyl transferase MTHFR PF02219.17 gi|156937290|ref|YP_001435086.1| - 9.4e-14 51.4 0.0 1.5e-13 50.7 0.0 1.3 1 0 0 1 1 1 1 Methylenetetrahydrofolate reductase MTHFR_C PF12225.8 gi|156937290|ref|YP_001435086.1| - 7e-09 35.2 0.0 1.3e-08 34.4 0.0 1.4 1 0 0 1 1 1 1 Methylene-tetrahydrofolate reductase C terminal Radical_SAM PF04055.21 gi|156937290|ref|YP_001435086.1| - 0.01 16.2 0.0 0.036 14.5 0.0 1.9 1 1 1 2 2 2 0 Radical SAM superfamily CBS PF00571.28 gi|156937291|ref|YP_001435087.1| - 1e-29 102.8 11.7 3.2e-11 43.5 0.3 4.1 4 0 0 4 4 4 4 CBS domain FlaG PF03646.15 gi|156937291|ref|YP_001435087.1| - 0.018 15.2 0.0 0.048 13.8 0.0 1.8 1 0 0 1 1 1 0 FlaG protein Lactamase_B_3 PF13483.6 gi|156937292|ref|YP_001435088.1| - 0.11 12.4 0.0 0.17 11.8 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain HTH_psq PF05225.16 gi|156937293|ref|YP_001435089.1| - 0.036 13.8 0.1 0.091 12.5 0.1 1.7 1 0 0 1 1 1 0 helix-turn-helix, Psq domain OrsD PF12013.8 gi|156937293|ref|YP_001435089.1| - 0.094 13.2 1.6 0.21 12.1 1.6 1.5 1 0 0 1 1 1 0 Orsellinic acid/F9775 biosynthesis cluster protein D Rpr2 PF04032.16 gi|156937293|ref|YP_001435089.1| - 0.12 12.7 0.8 0.27 11.5 0.8 2.0 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain DUF1028 PF06267.12 gi|156937294|ref|YP_001435090.1| - 7.6e-16 58.5 0.0 8.8e-16 58.3 0.0 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF1028) DUF4618 PF15397.6 gi|156937295|ref|YP_001435091.1| - 0.0036 16.7 0.6 0.0037 16.7 0.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4618) DUF948 PF06103.11 gi|156937295|ref|YP_001435091.1| - 0.0037 17.5 3.2 0.0049 17.1 3.2 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF948) TolA_bind_tri PF16331.5 gi|156937295|ref|YP_001435091.1| - 0.0098 15.9 2.7 0.013 15.5 2.7 1.1 1 0 0 1 1 1 1 TolA binding protein trimerisation DUF4200 PF13863.6 gi|156937295|ref|YP_001435091.1| - 0.015 15.7 0.2 0.018 15.4 0.2 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4200) BLOC1_2 PF10046.9 gi|156937295|ref|YP_001435091.1| - 0.023 15.0 0.4 0.025 14.9 0.4 1.1 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CLZ PF16526.5 gi|156937295|ref|YP_001435091.1| - 0.028 14.8 0.8 0.036 14.4 0.8 1.2 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Cadherin_C_2 PF16492.5 gi|156937295|ref|YP_001435091.1| - 0.033 14.9 0.1 0.035 14.8 0.1 1.1 1 0 0 1 1 1 0 Cadherin cytoplasmic C-terminal HALZ PF02183.18 gi|156937295|ref|YP_001435091.1| - 0.033 14.4 0.4 0.045 14.0 0.4 1.1 1 0 0 1 1 1 0 Homeobox associated leucine zipper Spectrin PF00435.21 gi|156937295|ref|YP_001435091.1| - 0.038 14.5 0.1 0.041 14.4 0.1 1.1 1 0 0 1 1 1 0 Spectrin repeat DivIC PF04977.15 gi|156937295|ref|YP_001435091.1| - 0.039 13.7 0.3 0.048 13.4 0.3 1.2 1 0 0 1 1 1 0 Septum formation initiator TAFH PF07531.14 gi|156937295|ref|YP_001435091.1| - 0.042 14.0 0.2 0.052 13.7 0.2 1.1 1 0 0 1 1 1 0 NHR1 homology to TAF FlaC_arch PF05377.11 gi|156937295|ref|YP_001435091.1| - 0.05 14.0 0.6 0.069 13.6 0.6 1.3 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) TMF_DNA_bd PF12329.8 gi|156937295|ref|YP_001435091.1| - 0.051 13.6 0.2 0.069 13.2 0.2 1.1 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding DUF2985 PF11204.8 gi|156937295|ref|YP_001435091.1| - 0.056 13.6 0.5 0.073 13.2 0.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2985) SlyX PF04102.12 gi|156937295|ref|YP_001435091.1| - 0.17 12.5 1.5 0.24 12.1 1.5 1.2 1 0 0 1 1 1 0 SlyX DASH_Hsk3 PF08227.11 gi|156937295|ref|YP_001435091.1| - 0.18 12.2 4.2 1.4 9.3 4.1 2.1 1 1 0 1 1 1 0 DASH complex subunit Hsk3 like LPP PF04728.13 gi|156937295|ref|YP_001435091.1| - 0.19 12.2 2.2 0.29 11.5 2.2 1.3 1 0 0 1 1 1 0 Lipoprotein leucine-zipper EMP24_GP25L PF01105.24 gi|156937295|ref|YP_001435091.1| - 0.2 11.6 2.2 0.22 11.5 2.0 1.2 1 1 0 1 1 1 0 emp24/gp25L/p24 family/GOLD Bap31_Bap29_C PF18035.1 gi|156937295|ref|YP_001435091.1| - 0.7 10.0 3.7 1 9.4 3.7 1.2 1 0 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF211 PF02680.14 gi|156937299|ref|YP_001435095.1| - 2.8e-22 78.7 5.7 3.2e-22 78.5 5.7 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 ATP_bind_3 PF01171.20 gi|156937300|ref|YP_001435096.1| - 6.5e-11 42.3 0.0 1.1e-10 41.5 0.0 1.4 1 1 0 1 1 1 1 PP-loop family HTH_5 PF01022.20 gi|156937300|ref|YP_001435096.1| - 0.0018 18.1 0.0 0.005 16.7 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family PAPS_reduct PF01507.19 gi|156937300|ref|YP_001435096.1| - 0.008 16.2 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family zn-ribbon_14 PF16503.5 gi|156937300|ref|YP_001435096.1| - 0.0099 15.4 0.2 0.0099 15.4 0.2 2.6 3 0 0 3 3 3 1 Zinc-ribbon QueC PF06508.13 gi|156937300|ref|YP_001435096.1| - 0.015 14.8 0.0 0.28 10.6 0.0 2.2 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC NAD_synthase PF02540.17 gi|156937300|ref|YP_001435096.1| - 0.022 13.9 0.0 0.034 13.3 0.0 1.3 1 0 0 1 1 1 0 NAD synthase Asn_synthase PF00733.21 gi|156937300|ref|YP_001435096.1| - 0.039 13.6 0.0 0.062 12.9 0.0 1.3 1 0 0 1 1 1 0 Asparagine synthase RecR PF02132.15 gi|156937300|ref|YP_001435096.1| - 0.048 13.2 4.5 0.38 10.3 0.2 3.0 3 0 0 3 3 3 0 RecR protein DZR PF12773.7 gi|156937300|ref|YP_001435096.1| - 0.052 13.6 0.3 0.052 13.6 0.3 2.8 3 0 0 3 3 3 0 Double zinc ribbon HTH_10 PF04967.12 gi|156937300|ref|YP_001435096.1| - 0.12 12.2 0.0 3.7 7.4 0.0 2.9 3 0 0 3 3 3 0 HTH DNA binding domain tRNA_Me_trans PF03054.16 gi|156937300|ref|YP_001435096.1| - 0.2 10.4 0.0 0.27 10.0 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase CYTH PF01928.21 gi|156937301|ref|YP_001435097.1| - 8.4e-30 104.0 1.3 9.7e-30 103.8 1.3 1.0 1 0 0 1 1 1 1 CYTH domain B3R PF17057.5 gi|156937301|ref|YP_001435097.1| - 0.078 13.2 0.5 0.1 12.8 0.0 1.5 2 0 0 2 2 2 0 Poxviridae B3 protein DUF1610 PF07754.11 gi|156937302|ref|YP_001435098.1| - 3.3e-09 36.5 3.9 3.3e-09 36.5 3.9 3.3 3 0 0 3 3 3 1 Domain of unknown function (DUF1610) DZR PF12773.7 gi|156937302|ref|YP_001435098.1| - 4.1e-05 23.5 10.5 0.027 14.5 4.6 2.3 1 1 1 2 2 2 2 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|156937302|ref|YP_001435098.1| - 0.00027 20.5 16.9 0.27 11.0 0.1 4.1 3 1 0 3 3 3 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|156937302|ref|YP_001435098.1| - 0.0011 18.8 9.8 0.016 15.1 0.4 2.3 2 1 0 2 2 2 1 Putative transposase DNA-binding domain zinc_ribbon_10 PF10058.9 gi|156937302|ref|YP_001435098.1| - 0.0025 17.5 15.3 0.098 12.4 1.9 3.7 1 1 2 3 3 3 2 Predicted integral membrane zinc-ribbon metal-binding protein zf-CHY PF05495.12 gi|156937302|ref|YP_001435098.1| - 0.0085 16.6 5.7 0.042 14.3 6.3 1.7 1 1 1 2 2 2 1 CHY zinc finger zf-ribbon_3 PF13248.6 gi|156937302|ref|YP_001435098.1| - 0.0089 15.4 21.3 0.026 13.9 0.2 4.1 3 1 1 4 4 4 1 zinc-ribbon domain Rubredoxin_2 PF18073.1 gi|156937302|ref|YP_001435098.1| - 0.0097 15.6 21.4 1 9.1 0.3 4.0 3 1 0 3 3 3 1 Rubredoxin metal binding domain DUF35_N PF12172.8 gi|156937302|ref|YP_001435098.1| - 0.012 15.5 16.7 1.1 9.2 0.1 3.7 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) PolC_DP2 PF03833.13 gi|156937302|ref|YP_001435098.1| - 0.012 13.5 2.9 0.012 13.5 2.9 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zinc_ribbon_4 PF13717.6 gi|156937302|ref|YP_001435098.1| - 0.015 15.2 16.0 0.2 11.6 0.2 4.0 3 1 1 4 4 4 0 zinc-ribbon domain HypA PF01155.19 gi|156937302|ref|YP_001435098.1| - 0.018 15.1 9.7 0.15 12.1 0.2 2.1 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf_C2H2_10 PF18414.1 gi|156937302|ref|YP_001435098.1| - 0.035 13.6 10.3 2.7 7.6 0.4 3.3 3 0 0 3 3 3 0 C2H2 type zinc-finger TF_Zn_Ribbon PF08271.12 gi|156937302|ref|YP_001435098.1| - 0.037 13.5 15.5 0.28 10.7 0.2 4.0 4 0 0 4 4 4 0 TFIIB zinc-binding RNA_POL_M_15KD PF02150.16 gi|156937302|ref|YP_001435098.1| - 0.043 13.7 0.4 0.043 13.7 0.4 2.9 2 1 0 2 2 2 0 RNA polymerases M/15 Kd subunit C1_2 PF03107.16 gi|156937302|ref|YP_001435098.1| - 0.044 14.1 7.5 0.62 10.4 2.2 2.3 1 1 1 2 2 2 0 C1 domain zf-RING_7 PF02591.15 gi|156937302|ref|YP_001435098.1| - 0.078 13.2 15.2 1.3 9.2 0.2 3.9 3 1 1 4 4 4 0 C4-type zinc ribbon domain zf_UBZ PF18439.1 gi|156937302|ref|YP_001435098.1| - 0.085 12.5 16.4 3.1 7.5 0.2 4.1 2 1 2 4 4 4 0 Ubiquitin-Binding Zinc Finger zinc-ribbons_6 PF07191.12 gi|156937302|ref|YP_001435098.1| - 0.089 12.8 8.6 0.51 10.4 0.1 2.3 1 1 1 2 2 2 0 zinc-ribbons zinc_ribbon_5 PF13719.6 gi|156937302|ref|YP_001435098.1| - 0.13 12.1 13.6 0.12 12.2 1.1 3.2 2 1 1 3 3 3 0 zinc-ribbon domain zf-HIT PF04438.16 gi|156937302|ref|YP_001435098.1| - 0.13 12.1 18.7 9.1 6.3 0.0 3.8 3 1 0 3 3 3 0 HIT zinc finger zf-RING_9 PF13901.6 gi|156937302|ref|YP_001435098.1| - 0.14 12.1 4.2 0.16 12.0 4.2 1.0 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-MYND PF01753.18 gi|156937302|ref|YP_001435098.1| - 0.15 12.1 11.7 0.99 9.6 0.5 2.2 2 0 0 2 2 2 0 MYND finger Zn-ribbon_8 PF09723.10 gi|156937302|ref|YP_001435098.1| - 0.16 12.1 17.4 20 5.4 0.1 3.8 2 1 0 2 2 2 0 Zinc ribbon domain zf-AN1 PF01428.16 gi|156937302|ref|YP_001435098.1| - 0.18 12.0 11.5 3.6 7.8 2.6 3.0 2 1 1 3 3 3 0 AN1-like Zinc finger Zn_ribbon_SprT PF17283.2 gi|156937302|ref|YP_001435098.1| - 0.24 11.3 21.5 1.4 8.8 7.7 3.9 1 1 1 2 2 2 0 SprT-like zinc ribbon domain DUF2321 PF10083.9 gi|156937302|ref|YP_001435098.1| - 0.26 10.9 5.2 0.16 11.6 2.7 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) Rubredoxin PF00301.20 gi|156937302|ref|YP_001435098.1| - 0.3 11.1 15.1 3.7 7.7 0.0 3.7 3 1 1 4 4 4 0 Rubredoxin zf-ACC PF17848.1 gi|156937302|ref|YP_001435098.1| - 0.32 11.1 14.8 1.4 9.0 0.1 4.1 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-C2HC5 PF06221.13 gi|156937302|ref|YP_001435098.1| - 0.49 10.4 9.1 21 5.2 9.1 2.3 1 1 0 1 1 1 0 Putative zinc finger motif, C2HC5-type zf-Mss51 PF13824.6 gi|156937302|ref|YP_001435098.1| - 0.67 10.1 14.2 3.6 7.7 3.9 2.7 2 1 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-H2C2_2 PF13465.6 gi|156937302|ref|YP_001435098.1| - 0.8 10.2 17.2 5.7 7.6 1.6 3.9 3 1 1 4 4 4 0 Zinc-finger double domain RNHCP PF12647.7 gi|156937302|ref|YP_001435098.1| - 0.98 9.4 10.4 1 9.4 0.7 2.8 1 1 2 3 3 3 0 RNHCP domain zf-ISL3 PF14690.6 gi|156937302|ref|YP_001435098.1| - 1.4 9.7 21.6 6.9 7.4 0.3 4.1 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-B_box PF00643.24 gi|156937302|ref|YP_001435098.1| - 1.4 9.1 9.1 4.4 7.6 4.7 2.7 1 1 1 2 2 2 0 B-box zinc finger PhnA_Zn_Ribbon PF08274.12 gi|156937302|ref|YP_001435098.1| - 1.4 8.9 12.2 17 5.5 0.1 4.0 3 1 1 4 4 4 0 PhnA Zinc-Ribbon zf-TFIIB PF13453.6 gi|156937302|ref|YP_001435098.1| - 1.5 8.2 16.7 17 4.9 7.6 3.2 1 1 0 2 2 2 0 Transcription factor zinc-finger Mut7-C PF01927.16 gi|156937302|ref|YP_001435098.1| - 1.6 8.8 7.2 0.12 12.4 2.1 1.7 1 1 1 2 2 2 0 Mut7-C RNAse domain Desulfoferrod_N PF06397.12 gi|156937302|ref|YP_001435098.1| - 1.9 8.2 10.9 9.2 6.0 0.5 3.5 2 1 2 4 4 4 0 Desulfoferrodoxin, N-terminal domain DNA_RNApol_7kD PF03604.13 gi|156937302|ref|YP_001435098.1| - 2 8.1 16.4 0.93 9.2 2.2 3.2 1 1 2 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit NRDD PF13597.6 gi|156937302|ref|YP_001435098.1| - 2.1 7.0 9.4 1.8 7.3 0.2 2.0 1 1 1 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-NADH-PPase PF09297.11 gi|156937302|ref|YP_001435098.1| - 2.2 8.0 18.6 0.8 9.4 3.9 3.7 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L37ae PF01780.19 gi|156937302|ref|YP_001435098.1| - 2.3 8.4 8.9 17 5.5 0.2 3.0 1 1 2 3 3 3 0 Ribosomal L37ae protein family zf-C2H2 PF00096.26 gi|156937302|ref|YP_001435098.1| - 2.7 8.6 14.4 9.7 6.9 0.1 3.9 4 0 0 4 4 4 0 Zinc finger, C2H2 type HalOD2 PF18547.1 gi|156937302|ref|YP_001435098.1| - 3.4 7.6 14.5 6.9 6.7 0.1 3.9 3 1 1 4 4 4 0 Halobacterial output domain 2 DUF1272 PF06906.11 gi|156937302|ref|YP_001435098.1| - 3.9 7.6 12.0 5.4 7.2 1.7 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1272) zf-C2H2_4 PF13894.6 gi|156937302|ref|YP_001435098.1| - 4.9 8.2 13.2 64 4.8 0.2 4.0 4 0 0 4 4 4 0 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 gi|156937302|ref|YP_001435098.1| - 5.5 7.1 25.6 25 4.9 1.6 4.0 1 1 2 3 3 3 0 Transposase zinc-ribbon domain HscB_4_cys PF18256.1 gi|156937302|ref|YP_001435098.1| - 5.9 6.8 15.2 1.3 8.9 1.4 3.4 3 1 0 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif Sgf11 PF08209.11 gi|156937302|ref|YP_001435098.1| - 7.5 6.2 18.5 0.99 9.0 0.6 4.0 2 1 2 4 4 4 0 Sgf11 (transcriptional regulation protein) Ribosomal_L32p PF01783.23 gi|156937302|ref|YP_001435098.1| - 7.7 6.9 12.6 6.8 7.0 0.2 3.1 1 1 2 3 3 3 0 Ribosomal L32p protein family EF1_GNE PF00736.19 gi|156937303|ref|YP_001435099.1| - 7.8e-19 67.7 0.4 8.8e-19 67.5 0.4 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain Lactamase_B_2 PF12706.7 gi|156937305|ref|YP_001435101.1| - 7.7e-07 28.8 0.0 1.9e-06 27.6 0.0 1.6 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156937305|ref|YP_001435101.1| - 1.4e-05 25.2 0.2 0.022 14.8 0.0 2.5 2 1 1 3 3 3 2 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|156937305|ref|YP_001435101.1| - 0.033 14.1 0.1 0.15 11.9 0.1 1.9 1 1 0 1 1 1 0 Beta-lactamase superfamily domain YAcAr PF10686.9 gi|156937305|ref|YP_001435101.1| - 0.05 13.6 0.3 0.21 11.5 0.3 2.0 1 1 0 1 1 1 0 YspA, cpYpsA-related SLOG family GlutR_N PF05201.15 gi|156937306|ref|YP_001435102.1| - 5.2e-41 139.8 0.0 1.2e-40 138.6 0.0 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|156937306|ref|YP_001435102.1| - 3.3e-24 85.5 0.9 8.6e-24 84.2 0.3 2.1 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|156937306|ref|YP_001435102.1| - 9.7e-17 61.2 2.7 2.3e-16 60.0 2.7 1.7 1 0 0 1 1 1 1 Glutamyl-tRNAGlu reductase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|156937306|ref|YP_001435102.1| - 2e-08 33.8 0.1 3.6e-08 33.0 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|156937306|ref|YP_001435102.1| - 9.3e-07 29.1 2.4 1.1e-06 28.9 0.3 2.2 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 gi|156937306|ref|YP_001435102.1| - 5.6e-06 25.8 6.2 9.6e-06 25.0 6.0 1.5 1 1 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain F420_oxidored PF03807.17 gi|156937306|ref|YP_001435102.1| - 6.3e-06 26.7 1.5 2.3e-05 24.9 1.5 2.1 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent GFO_IDH_MocA PF01408.22 gi|156937306|ref|YP_001435102.1| - 0.00011 23.1 0.4 0.00029 21.7 0.2 1.9 2 0 0 2 2 1 1 Oxidoreductase family, NAD-binding Rossmann fold IlvN PF07991.12 gi|156937306|ref|YP_001435102.1| - 0.00013 21.6 0.5 0.00026 20.6 0.5 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain GIDA PF01134.22 gi|156937306|ref|YP_001435102.1| - 0.00043 19.5 0.9 0.00083 18.5 0.9 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A NAD_binding_10 PF13460.6 gi|156937306|ref|YP_001435102.1| - 0.00049 20.0 1.6 0.001 19.0 1.6 1.5 1 0 0 1 1 1 1 NAD(P)H-binding FAD_binding_2 PF00890.24 gi|156937306|ref|YP_001435102.1| - 0.00054 19.2 4.9 0.00081 18.6 4.5 1.6 1 1 1 2 2 2 1 FAD binding domain THF_DHG_CYH_C PF02882.19 gi|156937306|ref|YP_001435102.1| - 0.00055 19.3 1.0 0.37 10.1 0.1 2.4 2 0 0 2 2 2 2 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AdoHcyase_NAD PF00670.21 gi|156937306|ref|YP_001435102.1| - 0.0022 18.1 0.3 0.005 16.9 0.3 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FAD_oxidored PF12831.7 gi|156937306|ref|YP_001435102.1| - 0.0055 16.1 2.8 0.0055 16.1 2.8 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|156937306|ref|YP_001435102.1| - 0.0068 16.8 2.0 0.012 16.0 0.8 2.1 2 0 0 2 2 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 gi|156937306|ref|YP_001435102.1| - 0.0072 16.6 1.1 0.0072 16.6 1.1 2.5 3 1 0 3 3 2 1 Saccharopine dehydrogenase NADP binding domain Pyr_redox_2 PF07992.14 gi|156937306|ref|YP_001435102.1| - 0.0072 15.6 1.7 0.0072 15.6 1.7 2.4 2 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase 3HCDH_N PF02737.18 gi|156937306|ref|YP_001435102.1| - 0.01 15.7 0.6 0.01 15.7 0.6 2.5 3 1 1 4 4 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LVIVD PF08309.11 gi|156937306|ref|YP_001435102.1| - 0.017 14.4 0.1 0.036 13.4 0.1 1.5 1 0 0 1 1 1 0 LVIVD repeat adh_short PF00106.25 gi|156937306|ref|YP_001435102.1| - 0.04 13.4 1.7 0.095 12.1 1.8 1.8 1 1 0 1 1 1 0 short chain dehydrogenase 3HCDH PF00725.22 gi|156937306|ref|YP_001435102.1| - 0.043 14.4 0.1 1.5 9.5 0.0 2.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PglD_N PF17836.1 gi|156937306|ref|YP_001435102.1| - 0.069 13.8 0.1 0.24 12.0 0.1 2.0 1 0 0 1 1 1 0 PglD N-terminal domain Peptidase_C15 PF01470.17 gi|156937306|ref|YP_001435102.1| - 0.07 13.3 0.5 0.27 11.4 0.1 2.0 2 0 0 2 2 2 0 Pyroglutamyl peptidase NAD_binding_8 PF13450.6 gi|156937306|ref|YP_001435102.1| - 0.074 13.3 0.8 0.22 11.8 0.8 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FMO-like PF00743.19 gi|156937306|ref|YP_001435102.1| - 0.093 11.1 0.7 0.2 10.1 0.0 1.7 2 0 0 2 2 2 0 Flavin-binding monooxygenase-like TrkA_N PF02254.18 gi|156937306|ref|YP_001435102.1| - 0.12 12.6 1.9 0.76 10.0 1.9 2.5 1 1 0 1 1 1 0 TrkA-N domain DAO PF01266.24 gi|156937306|ref|YP_001435102.1| - 0.19 11.2 5.0 0.39 10.2 1.7 2.2 1 1 1 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|156937306|ref|YP_001435102.1| - 0.42 11.2 3.8 0.49 11.0 1.0 2.7 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|156937306|ref|YP_001435102.1| - 5.2 5.7 11.4 0.048 12.3 1.7 2.3 3 0 0 3 3 3 0 HI0933-like protein Gp-FAR-1 PF05823.12 gi|156937308|ref|YP_001435104.1| - 0.0019 18.6 0.1 0.0036 17.7 0.1 1.4 1 0 0 1 1 1 1 Nematode fatty acid retinoid binding protein (Gp-FAR-1) Topoisom_bac PF01131.20 gi|156937309|ref|YP_001435105.1| - 9.5e-73 245.5 0.1 8.5e-70 235.8 0.0 2.3 1 1 0 2 2 2 2 DNA topoisomerase Toprim PF01751.22 gi|156937309|ref|YP_001435105.1| - 8.9e-24 83.7 2.2 2.1e-23 82.5 0.0 2.9 4 0 0 4 4 2 1 Toprim domain Helicase_C PF00271.31 gi|156937309|ref|YP_001435105.1| - 3.4e-11 43.5 0.0 4.8e-06 26.9 0.0 3.6 3 0 0 3 3 3 2 Helicase conserved C-terminal domain DEAD PF00270.29 gi|156937309|ref|YP_001435105.1| - 5.3e-11 42.6 0.1 5.3e-10 39.3 0.0 2.7 3 1 0 3 3 3 1 DEAD/DEAH box helicase zf_Rg PF17915.1 gi|156937309|ref|YP_001435105.1| - 1.7e-07 30.5 1.1 1.7e-07 30.5 1.1 2.1 2 0 0 2 2 2 1 Reverse gyrase zinc finger ResIII PF04851.15 gi|156937309|ref|YP_001435105.1| - 0.00027 21.0 0.0 0.00086 19.4 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit YhfH PF14149.6 gi|156937309|ref|YP_001435105.1| - 0.013 15.5 5.9 0.47 10.5 0.1 3.5 3 0 0 3 3 3 0 YhfH-like protein AAA_23 PF13476.6 gi|156937309|ref|YP_001435105.1| - 0.014 15.9 12.5 0.032 14.7 7.2 3.7 3 1 0 3 3 2 0 AAA domain zf-ribbon_3 PF13248.6 gi|156937309|ref|YP_001435105.1| - 0.045 13.2 7.8 0.19 11.2 2.6 2.4 2 0 0 2 2 2 0 zinc-ribbon domain DNA_ligase_ZBD PF03119.16 gi|156937309|ref|YP_001435105.1| - 0.1 12.7 2.6 4.5 7.4 0.1 2.8 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Ig_Tie2_1 PF10430.9 gi|156937309|ref|YP_001435105.1| - 0.14 12.6 0.0 0.32 11.4 0.0 1.6 1 0 0 1 1 1 0 Tie-2 Ig-like domain 1 OrfB_Zn_ribbon PF07282.11 gi|156937309|ref|YP_001435105.1| - 0.15 12.0 4.8 0.12 12.3 0.3 2.6 2 0 0 2 2 2 0 Putative transposase DNA-binding domain RasGEF PF00617.19 gi|156937309|ref|YP_001435105.1| - 0.2 11.8 0.2 4.3 7.5 0.1 2.4 2 0 0 2 2 2 0 RasGEF domain DZR PF12773.7 gi|156937309|ref|YP_001435105.1| - 0.24 11.5 6.7 0.85 9.7 2.0 2.3 2 0 0 2 2 2 0 Double zinc ribbon NRDD PF13597.6 gi|156937309|ref|YP_001435105.1| - 0.26 10.0 0.5 0.64 8.7 0.5 1.6 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase SecA_DEAD PF07517.14 gi|156937309|ref|YP_001435105.1| - 0.29 10.4 1.4 4.5 6.5 1.6 2.5 1 1 0 1 1 1 0 SecA DEAD-like domain DUF87 PF01935.17 gi|156937309|ref|YP_001435105.1| - 0.37 10.9 7.9 0.29 11.2 0.3 3.4 4 0 0 4 4 3 0 Helicase HerA, central domain Prok-RING_1 PF14446.6 gi|156937309|ref|YP_001435105.1| - 0.47 10.4 7.5 0.076 13.0 1.6 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-TFIIB PF13453.6 gi|156937309|ref|YP_001435105.1| - 0.95 8.9 4.4 4.8 6.6 1.5 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|156937309|ref|YP_001435105.1| - 1.4 9.1 10.0 1.4 9.1 3.1 2.7 2 0 0 2 2 2 0 Zinc ribbon domain TackOD1 PF18551.1 gi|156937309|ref|YP_001435105.1| - 2.2 7.9 3.4 4.3 7.0 0.4 2.7 3 0 0 3 3 3 0 Thaumarchaeal output domain 1 zinc_ribbon_15 PF17032.5 gi|156937309|ref|YP_001435105.1| - 4.8 8.0 5.3 2.1 9.1 2.2 2.0 2 0 0 2 2 1 0 zinc-ribbon family TF_Zn_Ribbon PF08271.12 gi|156937309|ref|YP_001435105.1| - 7.2 6.2 5.7 22 4.7 0.2 2.8 3 0 0 3 3 2 0 TFIIB zinc-binding DEAD PF00270.29 gi|156937310|ref|YP_001435106.1| - 5.8e-21 75.0 0.0 3.2e-20 72.6 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|156937310|ref|YP_001435106.1| - 1.5e-15 57.5 0.0 5.6e-15 55.6 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|156937310|ref|YP_001435106.1| - 0.0006 19.8 0.0 0.031 14.3 0.0 2.6 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|156937310|ref|YP_001435106.1| - 0.024 14.9 0.6 0.22 11.9 0.1 2.8 2 2 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|156937310|ref|YP_001435106.1| - 0.11 12.2 0.0 0.3 10.8 0.0 1.8 1 1 0 1 1 1 0 AAA domain LZ3wCH PF18517.1 gi|156937310|ref|YP_001435106.1| - 0.11 12.6 0.3 1.3 9.1 0.1 2.7 2 0 0 2 2 2 0 Leucine zipper with capping helix domain IF-2B PF01008.17 gi|156937312|ref|YP_001435108.1| - 8e-96 320.6 0.0 9.4e-96 320.3 0.0 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family ASH PF15780.5 gi|156937313|ref|YP_001435109.1| - 0.0044 17.2 0.1 0.007 16.5 0.1 1.3 1 0 0 1 1 1 1 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin Form-deh_trans PF09163.11 gi|156937313|ref|YP_001435109.1| - 0.12 12.2 1.3 0.23 11.2 1.3 1.4 1 0 0 1 1 1 0 Formate dehydrogenase N, transmembrane Peptidase_M20 PF01546.28 gi|156937314|ref|YP_001435110.1| - 2.1e-29 102.7 1.7 3.8e-29 101.9 1.7 1.3 1 1 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|156937314|ref|YP_001435110.1| - 4e-16 58.9 0.0 7.8e-16 58.0 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain PqqD PF05402.12 gi|156937315|ref|YP_001435111.1| - 0.022 15.0 0.0 0.025 14.9 0.0 1.2 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) Jag_N PF14804.6 gi|156937315|ref|YP_001435111.1| - 0.11 12.8 0.3 0.25 11.7 0.1 1.8 2 1 0 2 2 2 0 Jag N-terminus DUF429 PF04250.13 gi|156937316|ref|YP_001435112.1| - 2.5e-10 40.5 3.2 1.6e-06 28.1 0.1 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF429) Metallophos_3 PF14582.6 gi|156937318|ref|YP_001435114.1| - 4.2e-14 52.5 0.0 4.2e-09 36.1 0.0 3.0 3 0 0 3 3 3 2 Metallophosphoesterase, calcineurin superfamily Metallophos_2 PF12850.7 gi|156937318|ref|YP_001435114.1| - 9.8e-13 48.6 0.0 4.3e-12 46.5 0.0 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|156937318|ref|YP_001435114.1| - 1e-12 49.0 0.3 1.2e-11 45.5 0.3 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Glyco_transf_4 PF13439.6 gi|156937318|ref|YP_001435114.1| - 0.0039 17.2 0.0 0.011 15.8 0.0 1.6 1 1 1 2 2 2 1 Glycosyltransferase Family 4 LpxI_N PF17930.1 gi|156937318|ref|YP_001435114.1| - 0.031 14.1 0.0 0.05 13.5 0.0 1.3 1 0 0 1 1 1 0 LpxI N-terminal domain RNA_lig_T4_1 PF09511.10 gi|156937319|ref|YP_001435115.1| - 1.5e-07 31.5 0.0 1.3e-06 28.5 0.0 2.0 1 1 0 2 2 2 1 RNA ligase NrfD PF03916.14 gi|156937321|ref|YP_001435117.1| - 2.4e-25 89.8 31.5 1.5e-24 87.2 31.5 2.2 1 1 0 1 1 1 1 Polysulphide reductase, NrfD Fer4_11 PF13247.6 gi|156937322|ref|YP_001435118.1| - 7.4e-16 58.1 13.1 2.2e-11 43.8 6.1 3.4 2 2 2 4 4 3 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156937322|ref|YP_001435118.1| - 2.3e-12 47.3 27.9 1.2e-08 35.4 6.2 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156937322|ref|YP_001435118.1| - 8.8e-11 41.2 32.2 5.2e-07 29.2 2.7 5.3 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|156937322|ref|YP_001435118.1| - 2e-10 40.3 34.0 3.7e-06 26.8 3.4 4.6 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_2 PF12797.7 gi|156937322|ref|YP_001435118.1| - 2.1e-10 40.1 34.4 5.1e-05 23.1 3.0 4.6 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|156937322|ref|YP_001435118.1| - 1.9e-09 37.5 21.8 6.2e-07 29.5 3.4 3.4 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156937322|ref|YP_001435118.1| - 2.6e-08 33.9 39.3 1.8e-05 24.8 9.7 4.2 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|156937322|ref|YP_001435118.1| - 2.6e-05 24.7 29.5 0.0021 18.6 4.7 4.2 3 2 1 4 4 4 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156937322|ref|YP_001435118.1| - 4.9e-05 23.7 26.2 0.0018 18.6 5.6 3.8 3 2 1 4 4 4 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156937322|ref|YP_001435118.1| - 0.00013 22.2 33.6 0.026 15.0 3.6 4.9 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_15 PF13459.6 gi|156937322|ref|YP_001435118.1| - 0.00032 21.4 8.3 0.14 12.9 0.8 3.3 3 0 0 3 3 3 2 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|156937322|ref|YP_001435118.1| - 0.00034 21.4 39.0 0.026 15.4 3.8 4.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156937322|ref|YP_001435118.1| - 0.0007 19.7 30.5 0.018 15.1 0.6 4.6 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937322|ref|YP_001435118.1| - 0.007 17.3 7.5 0.007 17.3 7.5 4.5 3 2 1 4 4 3 2 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|156937322|ref|YP_001435118.1| - 0.019 15.5 15.1 0.63 10.6 1.8 4.5 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|156937322|ref|YP_001435118.1| - 0.028 15.3 5.4 0.028 15.3 5.4 3.9 3 1 1 4 4 3 0 4Fe-4S dicluster domain CP12 PF02672.15 gi|156937322|ref|YP_001435118.1| - 0.043 14.6 1.4 0.09 13.5 1.4 1.5 1 0 0 1 1 1 0 CP12 domain DisA-linker PF10635.9 gi|156937322|ref|YP_001435118.1| - 0.045 13.5 0.0 0.073 12.8 0.0 1.2 1 0 0 1 1 1 0 DisA bacterial checkpoint controller linker region Cytochrom_c3_2 PF14537.6 gi|156937323|ref|YP_001435119.1| - 1.3e-05 25.6 4.5 0.00071 20.0 1.9 2.6 2 1 0 2 2 2 1 Cytochrome c3 Cytochrome_C7 PF14522.6 gi|156937323|ref|YP_001435119.1| - 6.2e-05 22.9 7.9 0.0059 16.6 7.9 2.6 1 1 0 1 1 1 1 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 gi|156937323|ref|YP_001435119.1| - 0.0082 15.9 18.5 0.47 10.2 0.6 4.0 3 1 0 3 3 3 2 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrome_CBB3 PF13442.6 gi|156937323|ref|YP_001435119.1| - 0.028 14.7 6.4 34 4.8 0.4 4.2 3 1 1 4 4 4 0 Cytochrome C oxidase, cbb3-type, subunit III Cytochrome_C554 PF13435.6 gi|156937323|ref|YP_001435119.1| - 0.07 14.1 8.2 5.4 8.0 2.4 3.1 2 1 0 2 2 2 0 Cytochrome c554 and c-prime Cytochrome_P460 PF16694.5 gi|156937323|ref|YP_001435119.1| - 1.1 9.6 6.2 14 6.0 0.0 3.7 4 0 0 4 4 4 0 Cytochrome P460 Cytochrom_CIII PF02085.16 gi|156937323|ref|YP_001435119.1| - 3.3 8.1 14.0 0.5 10.7 2.9 3.3 1 1 2 3 3 3 0 Class III cytochrome C family zf-CHY PF05495.12 gi|156937323|ref|YP_001435119.1| - 5.3 7.6 11.7 4.4 7.9 6.7 2.9 2 1 0 2 2 2 0 CHY zinc finger Chorismate_synt PF01264.21 gi|156937324|ref|YP_001435120.1| - 9.7e-125 415.6 0.0 1.1e-124 415.4 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase RTC PF01137.21 gi|156937325|ref|YP_001435121.1| - 1.8e-78 262.8 0.0 2e-78 262.6 0.0 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|156937325|ref|YP_001435121.1| - 9.4e-27 93.5 0.0 1.9e-26 92.6 0.0 1.5 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain SDH_sah PF01972.16 gi|156937326|ref|YP_001435122.1| - 3.8e-107 357.6 0.4 4.6e-107 357.3 0.4 1.0 1 0 0 1 1 1 1 Serine dehydrogenase proteinase CLP_protease PF00574.23 gi|156937326|ref|YP_001435122.1| - 2.1e-05 24.5 0.0 8.3e-05 22.5 0.0 1.9 2 0 0 2 2 2 1 Clp protease Peptidase_S49 PF01343.18 gi|156937326|ref|YP_001435122.1| - 0.0032 17.4 0.0 0.006 16.5 0.0 1.4 1 0 0 1 1 1 1 Peptidase family S49 Dak1_2 PF13684.6 gi|156937326|ref|YP_001435122.1| - 0.0042 16.2 1.7 0.26 10.3 0.1 2.1 2 0 0 2 2 2 2 Dihydroxyacetone kinase family FliG_N PF14842.6 gi|156937326|ref|YP_001435122.1| - 0.14 12.7 1.0 0.19 12.3 0.2 1.6 2 0 0 2 2 2 0 FliG N-terminal domain Peptidase_S8 PF00082.22 gi|156937327|ref|YP_001435123.1| - 2.6e-17 63.0 0.0 6.3e-17 61.8 0.0 1.6 1 1 0 1 1 1 1 Subtilase family IncE PF17627.2 gi|156937328|ref|YP_001435124.1| - 0.045 13.8 0.1 0.23 11.5 0.0 2.1 3 0 0 3 3 3 0 Inclusion membrane protein E DUF2721 PF11026.8 gi|156937328|ref|YP_001435124.1| - 0.06 13.2 4.6 0.16 11.9 0.3 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2721) DUF4337 PF14235.6 gi|156937328|ref|YP_001435124.1| - 0.73 9.9 3.3 1.8 8.7 0.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4337) NAD_kinase PF01513.21 gi|156937329|ref|YP_001435125.1| - 1.8e-31 109.5 0.1 1.4e-30 106.6 0.1 1.9 1 1 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|156937329|ref|YP_001435125.1| - 0.014 15.0 0.0 0.027 14.1 0.0 1.5 1 0 0 1 1 1 0 Diacylglycerol kinase catalytic domain T4SS_CagC PF16943.5 gi|156937329|ref|YP_001435125.1| - 0.17 12.0 0.1 0.32 11.2 0.1 1.4 1 0 0 1 1 1 0 Cag pathogenicity island, type IV secretory system CbiX PF01903.17 gi|156937330|ref|YP_001435126.1| - 4.9e-17 62.2 0.0 5.7e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|156937330|ref|YP_001435126.1| - 9.6e-07 28.4 0.2 9.6e-07 28.4 0.2 1.1 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|156937330|ref|YP_001435126.1| - 0.0007 18.8 0.0 0.0033 16.5 0.0 1.8 1 1 0 1 1 1 1 Ferrochelatase DUF371 PF04027.13 gi|156937331|ref|YP_001435127.1| - 1e-19 70.8 0.3 8.9e-19 67.8 0.3 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF371) Herpes_UL24 PF01646.16 gi|156937331|ref|YP_001435127.1| - 0.077 13.0 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 CitMHS PF03600.16 gi|156937332|ref|YP_001435128.1| - 1.5e-30 106.5 44.3 2.2e-19 69.8 16.0 2.7 2 1 0 3 3 3 2 Citrate transporter ArsB PF02040.15 gi|156937332|ref|YP_001435128.1| - 3.2e-08 33.3 26.5 8.5e-07 28.6 7.2 2.6 2 1 0 2 2 2 2 Arsenical pump membrane protein Nudix_hydro PF18290.1 gi|156937332|ref|YP_001435128.1| - 0.012 15.6 0.1 0.026 14.5 0.1 1.5 1 0 0 1 1 1 0 Nudix hydrolase domain TadF PF16964.5 gi|156937332|ref|YP_001435128.1| - 0.03 14.1 0.2 0.082 12.7 0.2 1.7 1 0 0 1 1 1 0 Putative tight adherence pilin protein F GHMP_kinases_N PF00288.26 gi|156937333|ref|YP_001435129.1| - 3.4e-12 46.4 0.8 3.4e-12 46.4 0.8 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|156937333|ref|YP_001435129.1| - 1.2e-08 35.2 0.4 4.2e-07 30.2 0.1 2.7 2 1 1 3 3 3 1 GHMP kinases C terminal PQQ_3 PF13570.6 gi|156937334|ref|YP_001435130.1| - 0.0001 22.7 0.2 1.8 9.2 0.0 4.2 3 1 0 3 3 3 1 PQQ-like domain PQQ_2 PF13360.6 gi|156937334|ref|YP_001435130.1| - 0.00026 20.7 0.2 0.0063 16.1 0.1 3.0 1 1 1 2 2 2 1 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|156937334|ref|YP_001435130.1| - 0.0005 20.3 0.1 8 6.8 0.0 4.3 2 2 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain ATP-synt_E PF05680.12 gi|156937334|ref|YP_001435130.1| - 0.0019 18.5 7.0 0.0025 18.1 0.3 3.2 4 0 0 4 4 4 1 ATP synthase E chain WD40 PF00400.32 gi|156937334|ref|YP_001435130.1| - 0.0093 16.8 0.0 4.9 8.2 0.0 3.3 3 0 0 3 3 3 1 WD domain, G-beta repeat GPAT_N PF14829.6 gi|156937334|ref|YP_001435130.1| - 0.16 12.0 0.7 1.1 9.3 0.0 2.6 2 0 0 2 2 2 0 Glycerol-3-phosphate acyltransferase N-terminal DUF2959 PF11172.8 gi|156937334|ref|YP_001435130.1| - 0.23 11.6 2.2 0.23 11.6 0.3 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2959) Lip_prot_lig_C PF10437.9 gi|156937334|ref|YP_001435130.1| - 1.8 8.6 4.8 7.8 6.6 0.2 3.1 3 0 0 3 3 3 0 Bacterial lipoate protein ligase C-terminus DUF2730 PF10805.8 gi|156937334|ref|YP_001435130.1| - 2 8.6 4.6 2.6 8.2 0.3 2.8 2 1 0 3 3 3 0 Protein of unknown function (DUF2730) DUF4140 PF13600.6 gi|156937334|ref|YP_001435130.1| - 2.4 8.7 6.1 19 5.7 0.3 3.0 3 0 0 3 3 3 0 N-terminal domain of unknown function (DUF4140) Com_YlbF PF06133.11 gi|156937334|ref|YP_001435130.1| - 3.4 8.3 11.1 4.1 8.1 0.1 3.3 3 0 0 3 3 3 0 Control of competence regulator ComK, YlbF/YmcA Complex1_49kDa PF00346.19 gi|156937335|ref|YP_001435131.1| - 6.2e-69 232.1 0.0 7.6e-67 225.3 0.0 2.1 1 1 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Complex1_30kDa PF00329.19 gi|156937335|ref|YP_001435131.1| - 3.1e-28 98.8 0.0 7.8e-28 97.6 0.0 1.7 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NiFeSe_Hases PF00374.19 gi|156937335|ref|YP_001435131.1| - 0.021 13.8 0.0 0.032 13.2 0.0 1.3 1 0 0 1 1 1 0 Nickel-dependent hydrogenase Methyltrans_SAM PF10672.9 gi|156937335|ref|YP_001435131.1| - 0.1 11.8 0.0 0.24 10.5 0.0 1.5 1 1 0 1 1 1 0 S-adenosylmethionine-dependent methyltransferase Oxidored_q6 PF01058.22 gi|156937336|ref|YP_001435132.1| - 8.4e-18 64.5 0.0 1.2e-17 64.0 0.0 1.2 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Oxidored_q4 PF00507.19 gi|156937337|ref|YP_001435133.1| - 1e-10 41.7 0.0 1.8e-10 40.9 0.0 1.3 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YhhN PF07947.14 gi|156937337|ref|YP_001435133.1| - 0.031 13.9 0.2 0.031 13.9 0.2 1.5 2 0 0 2 2 2 0 YhhN family Proton_antipo_M PF00361.20 gi|156937338|ref|YP_001435134.1| - 1.9e-54 184.8 29.7 1.9e-54 184.8 29.7 2.5 3 0 0 3 3 3 1 Proton-conducting membrane transporter Proton_antipo_M PF00361.20 gi|156937339|ref|YP_001435135.1| - 4.7e-63 213.1 23.7 1e-62 212.0 23.7 1.5 1 0 0 1 1 1 1 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|156937339|ref|YP_001435135.1| - 1.9e-10 40.7 1.0 1.9e-10 40.7 1.0 3.1 3 0 0 3 3 3 1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CTP-dep_RFKase PF01982.16 gi|156937340|ref|YP_001435136.1| - 3.4e-42 143.3 0.0 4.6e-42 142.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF120 MazE_antitoxin PF04014.18 gi|156937340|ref|YP_001435136.1| - 0.0069 16.3 0.1 0.054 13.4 0.1 2.3 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin MerR_2 PF13591.6 gi|156937340|ref|YP_001435136.1| - 0.026 14.4 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 MerR HTH family regulatory protein Thump_like PF18096.1 gi|156937340|ref|YP_001435136.1| - 0.05 13.5 0.2 0.16 11.9 0.0 1.9 2 0 0 2 2 2 0 THUMP domain-like Phage_integrase PF00589.22 gi|156937341|ref|YP_001435137.1| - 2.8e-32 111.9 0.1 7.8e-32 110.4 0.1 1.7 1 1 0 1 1 1 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|156937341|ref|YP_001435137.1| - 1.9e-06 28.2 0.0 0.003 18.0 0.0 2.3 1 1 1 2 2 2 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|156937341|ref|YP_001435137.1| - 1.6e-05 25.1 0.5 0.00016 21.9 0.1 2.5 2 1 1 3 3 3 2 Phage integrase, N-terminal SAM-like domain DUF3435 PF11917.8 gi|156937341|ref|YP_001435137.1| - 0.082 11.8 0.0 0.12 11.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3435) ABC_tran PF00005.27 gi|156937343|ref|YP_001435139.1| - 1.7e-10 41.6 0.0 4.5e-08 33.7 0.0 2.2 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156937343|ref|YP_001435139.1| - 4.2e-07 30.1 0.0 0.00097 19.0 0.0 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156937343|ref|YP_001435139.1| - 6.2e-07 29.1 0.0 0.0005 19.6 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|156937343|ref|YP_001435139.1| - 8.8e-05 22.8 0.0 0.00013 22.3 0.0 1.3 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|156937343|ref|YP_001435139.1| - 0.0004 20.3 0.0 0.00064 19.7 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase NACHT PF05729.12 gi|156937343|ref|YP_001435139.1| - 0.00047 20.1 0.0 0.0034 17.3 0.0 2.0 2 0 0 2 2 2 1 NACHT domain AAA_33 PF13671.6 gi|156937343|ref|YP_001435139.1| - 0.0009 19.4 0.0 0.00095 19.3 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|156937343|ref|YP_001435139.1| - 0.0027 17.3 0.0 0.0078 15.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|156937343|ref|YP_001435139.1| - 0.0074 16.7 0.1 0.022 15.2 0.1 1.9 1 1 0 1 1 1 1 AAA ATPase domain AAA_5 PF07728.14 gi|156937343|ref|YP_001435139.1| - 0.012 15.6 0.0 0.025 14.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Rad17 PF03215.15 gi|156937343|ref|YP_001435139.1| - 0.017 15.0 0.0 0.029 14.3 0.0 1.4 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|156937343|ref|YP_001435139.1| - 0.02 14.6 0.0 0.035 13.8 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|156937343|ref|YP_001435139.1| - 0.022 15.2 0.0 0.038 14.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|156937343|ref|YP_001435139.1| - 0.024 14.1 0.0 0.05 13.1 0.0 1.4 2 0 0 2 2 1 0 P-loop containing dynein motor region RNA_helicase PF00910.22 gi|156937343|ref|YP_001435139.1| - 0.031 14.7 0.0 0.051 14.0 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 gi|156937343|ref|YP_001435139.1| - 0.04 13.6 0.0 0.062 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|156937343|ref|YP_001435139.1| - 0.051 13.6 0.0 0.26 11.3 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 gi|156937343|ref|YP_001435139.1| - 0.081 13.0 0.0 0.12 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain HSDR_N PF04313.14 gi|156937343|ref|YP_001435139.1| - 0.11 12.5 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) AAA_23 PF13476.6 gi|156937343|ref|YP_001435139.1| - 0.12 12.9 0.0 0.18 12.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|156937343|ref|YP_001435139.1| - 0.14 11.5 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_30 PF13604.6 gi|156937343|ref|YP_001435139.1| - 0.15 11.7 0.0 0.21 11.3 0.0 1.6 1 1 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|156937343|ref|YP_001435139.1| - 0.15 12.3 0.0 0.98 9.7 0.0 2.0 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.6 gi|156937343|ref|YP_001435139.1| - 0.21 11.9 0.0 0.91 9.9 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_15 PF13175.6 gi|156937343|ref|YP_001435139.1| - 0.32 10.7 0.0 0.76 9.4 0.0 1.5 2 0 0 2 2 2 0 AAA ATPase domain UbiD PF01977.16 gi|156937344|ref|YP_001435140.1| - 1.3e-77 261.3 0.2 1.6e-77 261.1 0.2 1.1 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IF2_N PF04760.15 gi|156937344|ref|YP_001435140.1| - 0.15 11.9 0.5 0.44 10.4 0.1 2.0 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region DUF4821 PF16092.5 gi|156937344|ref|YP_001435140.1| - 0.17 11.5 0.0 0.27 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) NTP_transf_3 PF12804.7 gi|156937345|ref|YP_001435141.1| - 7.5e-05 23.1 0.1 9.5e-05 22.8 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Acetyltransf_1 PF00583.25 gi|156937346|ref|YP_001435142.1| - 8.6e-20 71.1 0.0 1.1e-19 70.8 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|156937346|ref|YP_001435142.1| - 3.2e-10 40.3 0.0 5.5e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|156937346|ref|YP_001435142.1| - 7.1e-09 35.7 0.1 2.6e-08 33.9 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|156937346|ref|YP_001435142.1| - 9.7e-08 31.9 0.1 1.5e-07 31.3 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|156937346|ref|YP_001435142.1| - 1.2e-06 28.7 0.0 1.4e-05 25.2 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|156937346|ref|YP_001435142.1| - 0.0001 22.0 0.0 0.00015 21.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|156937346|ref|YP_001435142.1| - 0.0018 19.0 0.0 0.002 18.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|156937346|ref|YP_001435142.1| - 0.038 14.2 0.3 0.11 12.6 0.0 1.9 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DFP PF04127.15 gi|156937347|ref|YP_001435143.1| - 1.9e-53 181.1 0.0 3.6e-53 180.2 0.0 1.5 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|156937347|ref|YP_001435143.1| - 1.8e-28 99.2 0.1 4.5e-28 98.0 0.0 1.6 2 0 0 2 2 2 1 Flavoprotein F420_oxidored PF03807.17 gi|156937347|ref|YP_001435143.1| - 0.00034 21.1 0.0 0.0013 19.3 0.0 1.9 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|156937347|ref|YP_001435143.1| - 0.11 12.7 0.0 0.45 10.7 0.0 2.0 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase MFS_1 PF07690.16 gi|156937348|ref|YP_001435144.1| - 4.8e-12 45.5 29.5 4.8e-12 45.5 29.5 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily SNARE_assoc PF09335.11 gi|156937348|ref|YP_001435144.1| - 0.0067 16.9 1.6 0.0067 16.9 1.6 4.1 4 1 0 4 4 4 1 SNARE associated Golgi protein DHH PF01368.20 gi|156937350|ref|YP_001435146.1| - 0.029 14.6 0.0 0.054 13.7 0.0 1.4 1 0 0 1 1 1 0 DHH family DUF4336 PF14234.6 gi|156937350|ref|YP_001435146.1| - 0.033 13.4 0.0 0.077 12.2 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4336) Ldh_1_C PF02866.18 gi|156937350|ref|YP_001435146.1| - 0.072 13.0 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 lactate/malate dehydrogenase, alpha/beta C-terminal domain Endothelin PF00322.17 gi|156937350|ref|YP_001435146.1| - 0.63 9.7 3.0 1.3 8.7 3.0 1.5 1 0 0 1 1 1 0 Endothelin family MoCF_biosynth PF00994.24 gi|156937352|ref|YP_001435148.1| - 2.1e-31 108.5 0.3 3e-31 108.0 0.3 1.2 1 0 0 1 1 1 1 Probable molybdopterin binding domain CinA_KH PF18146.1 gi|156937352|ref|YP_001435148.1| - 0.02 15.0 0.4 0.17 12.1 0.0 2.7 2 1 0 2 2 2 0 Damage-inducible protein CinA KH domain Thi4 PF01946.17 gi|156937353|ref|YP_001435149.1| - 1.4e-63 214.3 2.1 1.6e-63 214.1 2.1 1.0 1 0 0 1 1 1 1 Thi4 family FAD_binding_2 PF00890.24 gi|156937353|ref|YP_001435149.1| - 5e-13 48.9 5.2 2e-07 30.5 0.5 3.0 2 1 1 3 3 3 3 FAD binding domain DAO PF01266.24 gi|156937353|ref|YP_001435149.1| - 2.1e-11 44.1 5.4 3.4e-07 30.2 1.3 2.1 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|156937353|ref|YP_001435149.1| - 9.7e-10 38.4 1.9 1.2e-09 38.1 1.9 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|156937353|ref|YP_001435149.1| - 2e-09 37.5 0.5 4.8e-09 36.3 0.5 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|156937353|ref|YP_001435149.1| - 1.1e-08 34.7 0.5 4.8e-08 32.6 0.4 1.9 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|156937353|ref|YP_001435149.1| - 8.6e-07 28.5 0.5 1.6e-06 27.6 0.5 1.4 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|156937353|ref|YP_001435149.1| - 6.4e-06 25.1 0.4 1e-05 24.5 0.4 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|156937353|ref|YP_001435149.1| - 9.3e-06 25.0 0.4 1.8e-05 24.0 0.4 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|156937353|ref|YP_001435149.1| - 8.1e-05 22.0 0.2 0.00013 21.3 0.2 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|156937353|ref|YP_001435149.1| - 0.0008 18.8 0.2 0.0021 17.5 0.1 1.7 2 0 0 2 2 2 1 Flavin containing amine oxidoreductase Lycopene_cycl PF05834.12 gi|156937353|ref|YP_001435149.1| - 0.0076 15.3 0.1 0.019 14.0 0.0 1.6 2 0 0 2 2 2 1 Lycopene cyclase protein Glu_dehyd_C PF16912.5 gi|156937353|ref|YP_001435149.1| - 0.015 14.8 2.2 0.22 11.0 0.0 2.6 2 1 1 3 3 3 0 Glucose dehydrogenase C-terminus THF_DHG_CYH_C PF02882.19 gi|156937353|ref|YP_001435149.1| - 0.016 14.6 0.0 0.026 13.9 0.0 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Pyr_redox PF00070.27 gi|156937353|ref|YP_001435149.1| - 0.022 15.3 0.4 0.058 14.0 0.4 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|156937353|ref|YP_001435149.1| - 0.13 12.4 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase ThiF PF00899.21 gi|156937353|ref|YP_001435149.1| - 0.16 11.3 0.0 0.27 10.5 0.0 1.3 1 0 0 1 1 1 0 ThiF family K_oxygenase PF13434.6 gi|156937353|ref|YP_001435149.1| - 0.24 10.5 0.0 0.35 9.9 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) ANAPC4_WD40 PF12894.7 gi|156937354|ref|YP_001435150.1| - 2.1e-11 44.0 0.0 3.3e-05 24.1 0.0 4.7 2 1 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 gi|156937354|ref|YP_001435150.1| - 8.3e-10 39.1 5.6 0.0092 16.8 0.0 5.1 5 0 0 5 5 5 4 WD domain, G-beta repeat Frtz PF11768.8 gi|156937354|ref|YP_001435150.1| - 0.0037 15.7 0.0 0.011 14.1 0.0 1.7 2 0 0 2 2 2 1 WD repeat-containing and planar cell polarity effector protein Fritz eIF2A PF08662.11 gi|156937354|ref|YP_001435150.1| - 0.0089 15.9 0.0 0.03 14.2 0.0 1.8 2 0 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A IKI3 PF04762.12 gi|156937354|ref|YP_001435150.1| - 0.07 11.1 0.0 1.3 6.9 0.0 2.1 1 1 0 1 1 1 0 IKI3 family DUF3892 PF13031.6 gi|156937354|ref|YP_001435150.1| - 0.099 13.3 0.0 0.97 10.1 0.0 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF3892) PQQ_3 PF13570.6 gi|156937354|ref|YP_001435150.1| - 0.12 12.9 15.2 4.1 8.0 0.1 6.2 6 1 1 7 7 7 0 PQQ-like domain PQQ PF01011.21 gi|156937354|ref|YP_001435150.1| - 3 8.0 11.1 4.9 7.3 0.0 5.3 4 2 0 5 5 5 0 PQQ enzyme repeat PRA-CH PF01502.18 gi|156937355|ref|YP_001435151.1| - 3.3e-30 103.7 0.5 4.5e-30 103.3 0.5 1.2 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase Multi-haem_cyto PF13447.6 gi|156937355|ref|YP_001435151.1| - 0.0084 15.4 0.1 0.017 14.4 0.0 1.5 1 1 0 1 1 1 1 Seven times multi-haem cytochrome CxxCH Radical_SAM PF04055.21 gi|156937356|ref|YP_001435152.1| - 4e-21 76.1 0.0 2.1e-20 73.8 0.0 1.9 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|156937356|ref|YP_001435152.1| - 2.1e-05 24.8 0.0 3.8e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156937356|ref|YP_001435152.1| - 0.01 15.9 0.0 0.026 14.7 0.0 1.7 1 0 0 1 1 1 0 4Fe-4S single cluster domain zf-ribbon_3 PF13248.6 gi|156937356|ref|YP_001435152.1| - 0.021 14.3 7.5 0.14 11.6 0.1 2.9 3 0 0 3 3 3 0 zinc-ribbon domain zf_C2H2_10 PF18414.1 gi|156937356|ref|YP_001435152.1| - 0.031 13.8 3.0 1.9 8.1 0.2 2.6 2 0 0 2 2 2 0 C2H2 type zinc-finger DZR PF12773.7 gi|156937356|ref|YP_001435152.1| - 0.1 12.6 0.1 0.1 12.6 0.1 2.5 3 0 0 3 3 3 0 Double zinc ribbon DpnI PF06044.12 gi|156937356|ref|YP_001435152.1| - 0.12 11.9 3.9 0.29 10.7 0.2 2.4 2 1 0 2 2 2 0 Dam-replacing family OrfB_Zn_ribbon PF07282.11 gi|156937356|ref|YP_001435152.1| - 0.16 11.9 0.1 0.16 11.9 0.1 1.9 2 0 0 2 2 1 0 Putative transposase DNA-binding domain zf-C4_Topoisom PF01396.19 gi|156937356|ref|YP_001435152.1| - 0.17 11.7 9.1 0.18 11.6 0.0 3.1 3 0 0 3 3 2 0 Topoisomerase DNA binding C4 zinc finger TF_Zn_Ribbon PF08271.12 gi|156937356|ref|YP_001435152.1| - 0.24 11.0 6.5 2.9 7.5 0.0 3.2 3 0 0 3 3 3 0 TFIIB zinc-binding DUF1610 PF07754.11 gi|156937356|ref|YP_001435152.1| - 0.35 10.9 8.2 3.5 7.7 1.4 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zinc_ribbon_2 PF13240.6 gi|156937356|ref|YP_001435152.1| - 0.51 10.1 11.2 1.1 9.0 0.1 3.0 3 0 0 3 3 3 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|156937356|ref|YP_001435152.1| - 0.66 10.1 6.9 3.8 7.7 0.1 3.2 3 0 0 3 3 3 0 Zinc ribbon domain DUF1272 PF06906.11 gi|156937356|ref|YP_001435152.1| - 0.88 9.7 6.0 2.1 8.5 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1272) Usp PF00582.26 gi|156937357|ref|YP_001435153.1| - 2.1e-35 122.3 1.3 2.4e-35 122.1 1.3 1.0 1 0 0 1 1 1 1 Universal stress protein family B12-binding PF02310.19 gi|156937357|ref|YP_001435153.1| - 7.1e-05 22.8 0.1 0.17 11.9 0.0 2.2 1 1 1 2 2 2 2 B12 binding domain PIN_9 PF18477.1 gi|156937357|ref|YP_001435153.1| - 0.039 14.3 0.1 0.066 13.5 0.1 1.4 1 0 0 1 1 1 0 PIN like domain CbiA PF01656.23 gi|156937358|ref|YP_001435154.1| - 4.9e-13 49.3 0.0 2.1e-12 47.2 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|156937358|ref|YP_001435154.1| - 4.1e-08 33.3 0.0 6.1e-08 32.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|156937358|ref|YP_001435154.1| - 2.6e-06 27.1 0.2 0.00012 21.6 0.0 2.8 1 1 1 3 3 3 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|156937358|ref|YP_001435154.1| - 0.0031 16.7 0.0 0.0047 16.2 0.0 1.3 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|156937358|ref|YP_001435154.1| - 0.049 12.9 0.0 0.26 10.5 0.0 1.9 2 0 0 2 2 2 0 ATPase MipZ CBP_BcsQ PF06564.12 gi|156937358|ref|YP_001435154.1| - 0.15 11.5 0.1 5.1 6.5 0.0 2.1 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ AA_kinase PF00696.28 gi|156937359|ref|YP_001435155.1| - 8.6e-24 84.4 0.1 2.8e-23 82.8 0.1 1.7 1 1 0 1 1 1 1 Amino acid kinase family Peripla_BP_6 PF13458.6 gi|156937360|ref|YP_001435156.1| - 7.3e-06 25.9 0.0 1.1e-05 25.2 0.0 1.2 1 0 0 1 1 1 1 Periplasmic binding protein ABC_sub_bind PF04392.12 gi|156937360|ref|YP_001435156.1| - 0.00097 18.5 0.1 0.0014 18.0 0.1 1.2 1 0 0 1 1 1 1 ABC transporter substrate binding protein ANF_receptor PF01094.28 gi|156937360|ref|YP_001435156.1| - 0.0039 16.3 0.0 0.0067 15.6 0.0 1.3 1 0 0 1 1 1 1 Receptor family ligand binding region B12-binding PF02310.19 gi|156937360|ref|YP_001435156.1| - 0.028 14.5 0.0 0.066 13.3 0.0 1.6 1 0 0 1 1 1 0 B12 binding domain MoCF_biosynth PF00994.24 gi|156937360|ref|YP_001435156.1| - 0.033 13.8 0.0 0.085 12.5 0.0 1.6 1 0 0 1 1 1 0 Probable molybdopterin binding domain SBP_bac_5 PF00496.22 gi|156937360|ref|YP_001435156.1| - 0.05 12.5 0.0 0.079 11.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 5 Middle Snapin_Pallidin PF14712.6 gi|156937360|ref|YP_001435156.1| - 0.11 12.9 0.1 22 5.6 0.0 2.4 2 0 0 2 2 2 0 Snapin/Pallidin Amidase_3 PF01520.18 gi|156937360|ref|YP_001435156.1| - 0.15 12.2 0.0 0.28 11.3 0.0 1.4 1 0 0 1 1 1 0 N-acetylmuramoyl-L-alanine amidase HGTP_anticodon PF03129.20 gi|156937361|ref|YP_001435157.1| - 7.6e-23 80.5 0.6 2e-22 79.1 0.1 2.0 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|156937361|ref|YP_001435157.1| - 5.7e-07 29.7 0.1 2.4e-05 24.4 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Rad50_zn_hook PF04423.14 gi|156937361|ref|YP_001435157.1| - 0.011 15.6 1.3 0.18 11.7 0.1 2.9 2 0 0 2 2 2 0 Rad50 zinc hook motif HicA_toxin PF07927.12 gi|156937361|ref|YP_001435157.1| - 0.039 14.0 0.0 0.66 10.1 0.0 2.5 2 0 0 2 2 2 0 HicA toxin of bacterial toxin-antitoxin, zf-C2HC_2 PF13913.6 gi|156937361|ref|YP_001435157.1| - 0.086 12.8 0.1 0.086 12.8 0.1 2.4 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-RING_7 PF02591.15 gi|156937361|ref|YP_001435157.1| - 0.13 12.5 0.9 17 5.7 0.1 2.5 2 0 0 2 2 2 0 C4-type zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|156937361|ref|YP_001435157.1| - 0.28 11.3 2.5 4.7 7.4 2.4 2.3 1 1 0 1 1 1 0 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|156937361|ref|YP_001435157.1| - 0.42 10.3 2.1 6.8 6.5 0.2 2.4 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit CHAD PF05235.14 gi|156937362|ref|YP_001435158.1| - 0.03 14.3 0.4 0.056 13.4 0.1 1.5 2 0 0 2 2 2 0 CHAD domain DAHP_synth_1 PF00793.20 gi|156937362|ref|YP_001435158.1| - 0.17 10.7 0.0 0.29 10.0 0.0 1.3 1 0 0 1 1 1 0 DAHP synthetase I family Asn_synthase PF00733.21 gi|156937363|ref|YP_001435159.1| - 1.6e-47 162.9 0.0 2.1e-47 162.5 0.0 1.1 1 0 0 1 1 1 1 Asparagine synthase GATase_7 PF13537.6 gi|156937363|ref|YP_001435159.1| - 1.5e-40 137.9 0.0 2.9e-40 137.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|156937363|ref|YP_001435159.1| - 1.6e-40 138.4 0.0 4.6e-40 136.9 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase domain DUF3700 PF12481.8 gi|156937363|ref|YP_001435159.1| - 1.1e-07 31.6 0.0 2.1e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 Aluminium induced protein NAD_synthase PF02540.17 gi|156937363|ref|YP_001435159.1| - 0.0067 15.6 0.0 0.011 14.9 0.0 1.3 1 0 0 1 1 1 1 NAD synthase UbiD PF01977.16 gi|156937364|ref|YP_001435160.1| - 4.3e-140 467.1 0.0 5.6e-140 466.8 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HupF_HypC PF01455.18 gi|156937365|ref|YP_001435161.1| - 8.6e-22 77.1 0.1 1.2e-21 76.6 0.1 1.2 1 0 0 1 1 1 1 HupF/HypC family Prot_ATP_ID_OB PF16450.5 gi|156937365|ref|YP_001435161.1| - 0.1 12.5 0.5 0.52 10.3 0.5 2.0 1 1 0 1 1 1 0 Proteasomal ATPase OB C-terminal domain AA_permease_2 PF13520.6 gi|156937366|ref|YP_001435162.1| - 2.8e-32 112.1 34.1 3.6e-32 111.8 34.1 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|156937366|ref|YP_001435162.1| - 2.7e-26 92.2 32.6 3.8e-26 91.7 32.6 1.2 1 0 0 1 1 1 1 Amino acid permease SpoIID PF08486.10 gi|156937366|ref|YP_001435162.1| - 0.056 14.0 0.0 0.14 12.7 0.0 1.6 1 0 0 1 1 1 0 Stage II sporulation protein RNA_pol_L_2 PF13656.6 gi|156937368|ref|YP_001435164.1| - 4.5e-16 58.4 0.0 5.6e-16 58.1 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|156937368|ref|YP_001435164.1| - 0.00021 20.7 0.0 0.0018 17.7 0.0 2.1 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Peptidase_M29 PF02073.15 gi|156937368|ref|YP_001435164.1| - 0.11 11.2 0.0 0.11 11.2 0.0 1.1 1 0 0 1 1 1 0 Thermophilic metalloprotease (M29) DUF2067 PF09840.9 gi|156937369|ref|YP_001435165.1| - 4e-52 176.5 5.3 4.6e-52 176.3 5.3 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) Zw10 PF06248.13 gi|156937369|ref|YP_001435165.1| - 0.032 12.8 0.1 0.041 12.4 0.1 1.2 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 HTH_54 PF18607.1 gi|156937369|ref|YP_001435165.1| - 0.07 13.2 0.0 0.17 11.9 0.0 1.7 1 1 1 2 2 2 0 ParA helix turn helix domain ECR1_N PF14382.6 gi|156937370|ref|YP_001435166.1| - 3.1e-12 46.1 0.7 1e-11 44.4 0.2 2.0 2 0 0 2 2 2 1 Exosome complex exonuclease RRP4 N-terminal region zinc_ribbon_2 PF13240.6 gi|156937370|ref|YP_001435166.1| - 0.0011 18.7 4.9 0.0026 17.4 4.9 1.7 1 1 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|156937370|ref|YP_001435166.1| - 0.002 18.1 0.8 0.0034 17.4 0.8 1.3 1 0 0 1 1 1 1 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|156937370|ref|YP_001435166.1| - 0.0056 16.6 0.4 0.0095 15.8 0.4 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain EXOSC1 PF10447.9 gi|156937370|ref|YP_001435166.1| - 0.013 16.1 0.1 0.027 15.1 0.1 1.6 1 0 0 1 1 1 0 Exosome component EXOSC1/CSL4 zf-RING_7 PF02591.15 gi|156937370|ref|YP_001435166.1| - 0.02 15.1 0.9 1.1 9.5 0.2 2.6 2 0 0 2 2 2 0 C4-type zinc ribbon domain Biotin_lipoyl PF00364.22 gi|156937370|ref|YP_001435166.1| - 0.023 14.5 0.1 0.18 11.7 0.0 2.4 2 0 0 2 2 2 0 Biotin-requiring enzyme PriA_CRR PF18319.1 gi|156937370|ref|YP_001435166.1| - 0.034 14.1 1.2 0.071 13.1 1.2 1.6 1 1 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain zinc-ribbons_6 PF07191.12 gi|156937370|ref|YP_001435166.1| - 0.055 13.5 0.2 0.083 12.9 0.2 1.2 1 0 0 1 1 1 0 zinc-ribbons Auto_anti-p27 PF06677.12 gi|156937370|ref|YP_001435166.1| - 0.073 13.2 1.4 0.13 12.4 1.4 1.4 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Nudix_N_2 PF14803.6 gi|156937370|ref|YP_001435166.1| - 0.098 12.6 1.8 0.66 9.9 0.3 2.3 2 0 0 2 2 2 0 Nudix N-terminal HypA PF01155.19 gi|156937370|ref|YP_001435166.1| - 0.11 12.6 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|156937370|ref|YP_001435166.1| - 0.13 11.7 10.2 0.35 10.4 7.2 2.8 2 1 1 3 3 3 0 zinc-ribbon domain Biotin_lipoyl_2 PF13533.6 gi|156937370|ref|YP_001435166.1| - 0.19 11.6 0.4 1.3 8.9 0.0 2.5 3 0 0 3 3 3 0 Biotin-lipoyl like zf-NADH-PPase PF09297.11 gi|156937370|ref|YP_001435166.1| - 1.7 8.3 4.2 12 5.7 4.2 2.0 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|156937370|ref|YP_001435166.1| - 2.1 7.9 4.3 19 4.9 4.3 2.2 1 1 0 1 1 1 0 TFIIB zinc-binding Acetyltransf_1 PF00583.25 gi|156937371|ref|YP_001435167.1| - 1.5e-24 86.5 0.0 1.9e-24 86.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|156937371|ref|YP_001435167.1| - 8.7e-18 64.5 0.0 9.7e-18 64.3 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|156937371|ref|YP_001435167.1| - 1.6e-16 60.4 0.1 2.2e-16 60.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|156937371|ref|YP_001435167.1| - 7.5e-10 39.2 0.0 3.5e-09 37.0 0.0 1.8 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|156937371|ref|YP_001435167.1| - 1.2e-06 28.4 0.1 1.8e-06 27.8 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|156937371|ref|YP_001435167.1| - 2.2e-06 28.4 0.0 2.4e-05 25.0 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|156937371|ref|YP_001435167.1| - 3.6e-05 23.5 0.0 5.4e-05 22.9 0.0 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_18 PF18014.1 gi|156937371|ref|YP_001435167.1| - 0.00012 21.9 0.0 0.13 12.1 0.0 2.1 2 0 0 2 2 2 2 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|156937371|ref|YP_001435167.1| - 0.0012 19.0 0.0 0.0018 18.3 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_9 PF13527.7 gi|156937371|ref|YP_001435167.1| - 0.0038 17.3 0.0 0.017 15.2 0.0 1.9 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_6 PF13480.7 gi|156937371|ref|YP_001435167.1| - 0.0056 16.8 0.0 0.0065 16.6 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|156937371|ref|YP_001435167.1| - 0.01 15.3 0.1 0.014 14.9 0.1 1.3 1 1 0 1 1 1 0 Putative acetyl-transferase Gly_acyl_tr_C PF08444.10 gi|156937371|ref|YP_001435167.1| - 0.035 14.3 0.0 0.047 13.9 0.0 1.2 1 0 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region PanZ PF12568.8 gi|156937371|ref|YP_001435167.1| - 0.079 12.7 0.0 0.096 12.4 0.0 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ PALP PF00291.25 gi|156937373|ref|YP_001435169.1| - 2.7e-66 224.0 4.0 3.2e-66 223.7 4.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme IMP2_C PF18591.1 gi|156937373|ref|YP_001435169.1| - 0.022 14.6 1.2 6.4 6.7 0.2 2.8 2 1 0 2 2 2 0 Immune Mapped Protein 2 (IMP2) C-terminal domain Radical_SAM PF04055.21 gi|156937373|ref|YP_001435169.1| - 0.032 14.6 0.1 0.13 12.6 0.1 1.9 1 1 1 2 2 2 0 Radical SAM superfamily V4R PF02830.18 gi|156937374|ref|YP_001435170.1| - 8.3e-13 48.2 0.0 1.6e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 V4R domain TGS PF02824.21 gi|156937375|ref|YP_001435171.1| - 5.7e-20 71.1 0.0 1.6e-19 69.7 0.0 1.8 1 0 0 1 1 1 1 TGS domain MMR_HSR1_Xtn PF16897.5 gi|156937375|ref|YP_001435171.1| - 1.1e-19 70.4 0.0 1.7e-19 69.8 0.0 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 gi|156937375|ref|YP_001435171.1| - 4.3e-15 55.8 0.0 7e-14 51.9 0.0 2.4 2 1 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 gi|156937375|ref|YP_001435171.1| - 2.2e-06 27.3 0.0 7.1e-05 22.4 0.0 2.3 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|156937375|ref|YP_001435171.1| - 0.00075 19.4 0.2 0.0062 16.5 0.0 2.3 2 1 0 2 2 2 1 RsgA GTPase MeaB PF03308.16 gi|156937375|ref|YP_001435171.1| - 0.0062 15.5 0.1 0.6 9.0 0.0 2.4 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB YchF-GTPase_C PF06071.13 gi|156937375|ref|YP_001435171.1| - 0.0085 16.3 0.3 0.84 9.9 0.3 2.7 1 1 0 1 1 1 1 Protein of unknown function (DUF933) MMR_HSR1_C PF08438.10 gi|156937375|ref|YP_001435171.1| - 0.018 15.6 0.0 0.066 13.8 0.0 2.0 1 1 1 2 2 2 0 GTPase of unknown function C-terminal Oxidored_nitro PF00148.19 gi|156937375|ref|YP_001435171.1| - 0.064 12.0 0.1 0.21 10.3 0.1 1.8 1 1 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase CHD5 PF04420.14 gi|156937375|ref|YP_001435171.1| - 0.22 11.4 0.1 0.37 10.6 0.1 1.3 1 0 0 1 1 1 0 CHD5-like protein DAO PF01266.24 gi|156937376|ref|YP_001435172.1| - 5e-08 32.9 1.9 0.00078 19.1 0.2 2.1 2 0 0 2 2 2 2 FAD dependent oxidoreductase Lycopene_cycl PF05834.12 gi|156937376|ref|YP_001435172.1| - 3.6e-05 23.0 0.5 0.0027 16.8 0.0 2.3 2 1 0 2 2 2 2 Lycopene cyclase protein NAD_binding_8 PF13450.6 gi|156937376|ref|YP_001435172.1| - 0.0008 19.6 0.1 0.0023 18.1 0.1 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|156937376|ref|YP_001435172.1| - 0.0024 17.1 0.2 0.0061 15.8 0.2 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|156937376|ref|YP_001435172.1| - 0.027 15.0 0.5 0.063 13.9 0.5 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|156937376|ref|YP_001435172.1| - 0.24 10.2 0.2 15 4.3 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|156937376|ref|YP_001435172.1| - 0.41 9.9 1.3 1.2 8.3 0.1 2.1 2 0 0 2 2 2 0 FAD binding domain dUTPase PF00692.19 gi|156937378|ref|YP_001435174.1| - 1e-33 115.7 0.0 1.2e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 dUTPase Prenyltransf PF01255.19 gi|156937379|ref|YP_001435175.1| - 5e-76 255.1 0.1 6.1e-76 254.9 0.1 1.1 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase AAA PF00004.29 gi|156937380|ref|YP_001435176.1| - 1.6e-44 151.6 0.0 3.7e-44 150.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|156937380|ref|YP_001435176.1| - 4.6e-17 61.6 0.3 9.4e-17 60.6 0.3 1.5 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 gi|156937380|ref|YP_001435176.1| - 1.5e-10 40.9 1.7 4.4e-10 39.4 1.7 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 gi|156937380|ref|YP_001435176.1| - 8.2e-07 29.3 0.1 3.1e-06 27.4 0.0 2.0 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|156937380|ref|YP_001435176.1| - 1.1e-06 28.5 0.0 3.4e-06 26.9 0.0 1.8 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|156937380|ref|YP_001435176.1| - 2.9e-05 24.1 0.2 0.00022 21.3 0.2 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|156937380|ref|YP_001435176.1| - 6.1e-05 23.5 0.1 0.0029 18.0 0.1 2.4 1 1 1 2 2 2 1 AAA ATPase domain Prot_ATP_OB_N PF17758.1 gi|156937380|ref|YP_001435176.1| - 0.00019 21.0 1.1 0.00057 19.5 1.1 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB N-terminal domain TIP49 PF06068.13 gi|156937380|ref|YP_001435176.1| - 0.0016 17.7 0.0 0.003 16.8 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_22 PF13401.6 gi|156937380|ref|YP_001435176.1| - 0.0042 17.4 0.3 0.17 12.1 0.1 2.5 1 1 0 2 2 2 1 AAA domain DUF815 PF05673.13 gi|156937380|ref|YP_001435176.1| - 0.0051 16.0 0.0 0.0097 15.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|156937380|ref|YP_001435176.1| - 0.0079 16.5 0.0 0.013 15.7 0.0 1.6 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|156937380|ref|YP_001435176.1| - 0.0087 15.5 0.1 0.019 14.4 0.1 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|156937380|ref|YP_001435176.1| - 0.022 15.1 0.0 0.052 13.9 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_33 PF13671.6 gi|156937380|ref|YP_001435176.1| - 0.026 14.7 0.0 0.053 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Bac_DnaA PF00308.18 gi|156937380|ref|YP_001435176.1| - 0.027 14.3 0.1 7.2 6.4 0.0 2.8 1 1 1 2 2 2 0 Bacterial dnaA protein AAA_14 PF13173.6 gi|156937380|ref|YP_001435176.1| - 0.031 14.3 0.0 0.066 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|156937380|ref|YP_001435176.1| - 0.032 14.6 0.2 0.11 12.9 0.2 2.1 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|156937380|ref|YP_001435176.1| - 0.037 14.6 0.0 0.39 11.2 0.0 2.4 1 1 0 2 2 2 0 ABC transporter AAA_18 PF13238.6 gi|156937380|ref|YP_001435176.1| - 0.043 14.4 0.4 0.15 12.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 gi|156937380|ref|YP_001435176.1| - 0.044 13.6 0.0 0.084 12.7 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ZapB PF06005.12 gi|156937380|ref|YP_001435176.1| - 0.047 14.1 2.4 0.22 12.0 0.2 2.7 3 0 0 3 3 3 0 Cell division protein ZapB DivIC PF04977.15 gi|156937380|ref|YP_001435176.1| - 0.07 12.9 0.1 0.24 11.2 0.1 1.9 1 0 0 1 1 1 0 Septum formation initiator IstB_IS21 PF01695.17 gi|156937380|ref|YP_001435176.1| - 0.077 12.7 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein SOGA PF11365.8 gi|156937380|ref|YP_001435176.1| - 0.087 14.0 0.2 0.23 12.6 0.2 1.7 1 0 0 1 1 1 0 Protein SOGA ATPase PF06745.13 gi|156937380|ref|YP_001435176.1| - 0.088 12.1 0.1 0.7 9.2 0.0 2.2 2 0 0 2 2 2 0 KaiC bZIP_1 PF00170.21 gi|156937380|ref|YP_001435176.1| - 0.11 12.6 0.8 0.26 11.4 0.8 1.6 1 0 0 1 1 1 0 bZIP transcription factor Rad17 PF03215.15 gi|156937380|ref|YP_001435176.1| - 0.12 12.3 0.1 0.41 10.5 0.0 1.7 1 1 1 2 2 2 0 Rad17 P-loop domain Osmo_MPGsynth PF09488.10 gi|156937380|ref|YP_001435176.1| - 0.15 10.7 0.0 0.21 10.2 0.0 1.2 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) TsaE PF02367.17 gi|156937380|ref|YP_001435176.1| - 0.16 11.9 0.0 0.36 10.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Dynamitin PF04912.14 gi|156937380|ref|YP_001435176.1| - 0.17 11.1 0.2 0.48 9.7 0.0 1.7 2 0 0 2 2 2 0 Dynamitin ATPase_2 PF01637.18 gi|156937380|ref|YP_001435176.1| - 0.19 11.6 1.6 1.2 9.0 0.3 2.5 2 1 1 3 3 2 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|156937380|ref|YP_001435176.1| - 0.22 11.5 0.1 2.1 8.2 0.1 2.2 2 0 0 2 2 2 0 NACHT domain TSC22 PF01166.18 gi|156937380|ref|YP_001435176.1| - 0.31 11.4 5.1 0.092 13.1 1.6 1.9 2 0 0 2 2 1 0 TSC-22/dip/bun family Ribosomal_S19 PF00203.21 gi|156937381|ref|YP_001435177.1| - 4.9e-32 109.6 1.1 6.4e-32 109.3 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 Sec6 PF06046.13 gi|156937381|ref|YP_001435177.1| - 0.0027 16.2 0.1 0.0034 15.8 0.1 1.1 1 0 0 1 1 1 1 Exocyst complex component Sec6 RE_MjaI PF09568.10 gi|156937381|ref|YP_001435177.1| - 0.11 12.4 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 MjaI restriction endonuclease Myb_DNA-bind_7 PF15963.5 gi|156937381|ref|YP_001435177.1| - 0.11 12.4 0.6 0.17 11.8 0.6 1.2 1 0 0 1 1 1 0 Myb DNA-binding like Peptidase_M24 PF00557.24 gi|156937381|ref|YP_001435177.1| - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase family M24 Ribosomal_L22 PF00237.19 gi|156937382|ref|YP_001435178.1| - 2.2e-29 101.7 0.2 2.7e-29 101.4 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Ribosomal_S3_C PF00189.20 gi|156937383|ref|YP_001435179.1| - 3.3e-21 75.6 2.5 6.7e-21 74.6 2.5 1.5 1 0 0 1 1 1 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|156937383|ref|YP_001435179.1| - 9.5e-13 47.8 0.3 9.5e-13 47.8 0.3 2.3 2 1 0 2 2 2 1 KH domain KH_1 PF00013.29 gi|156937383|ref|YP_001435179.1| - 0.0045 16.8 9.9 0.01 15.6 0.9 2.7 3 0 0 3 3 3 2 KH domain KH_5 PF13184.6 gi|156937383|ref|YP_001435179.1| - 0.031 14.4 3.0 0.058 13.5 0.1 2.8 4 0 0 4 4 4 0 NusA-like KH domain KH_4 PF13083.6 gi|156937383|ref|YP_001435179.1| - 0.04 13.8 0.5 0.04 13.8 0.5 2.3 2 2 1 3 3 3 0 KH domain Ribosomal_L29 PF00831.23 gi|156937384|ref|YP_001435180.1| - 9.6e-21 73.5 5.4 1.2e-20 73.2 5.4 1.1 1 0 0 1 1 1 1 Ribosomal L29 protein DUF2299 PF10061.9 gi|156937384|ref|YP_001435180.1| - 0.03 14.1 0.3 0.031 14.0 0.3 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2299) UPF0086 PF01868.16 gi|156937385|ref|YP_001435181.1| - 3.7e-16 58.8 0.1 4.1e-16 58.7 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function UPF0086 HpaB_N PF11794.8 gi|156937388|ref|YP_001435184.1| - 5.8e-94 314.8 0.4 9.4e-94 314.1 0.4 1.3 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|156937388|ref|YP_001435184.1| - 3.9e-62 208.9 0.3 5.4e-62 208.5 0.3 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Acyl-CoA_dh_1 PF00441.24 gi|156937388|ref|YP_001435184.1| - 0.00045 20.5 0.1 0.0013 19.0 0.1 1.7 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain NIBRIN_BRCT_II PF16508.5 gi|156937388|ref|YP_001435184.1| - 0.065 13.6 0.0 0.15 12.4 0.0 1.6 1 0 0 1 1 1 0 Second BRCT domain on Nijmegen syndrome breakage protein Acyl-CoA_dh_M PF02770.19 gi|156937388|ref|YP_001435184.1| - 0.12 12.5 0.2 0.36 11.0 0.0 1.9 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase, middle domain Amidohydro_1 PF01979.20 gi|156937389|ref|YP_001435185.1| - 1.2e-16 61.0 0.0 4.7e-16 59.0 0.0 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|156937389|ref|YP_001435185.1| - 2.1e-08 34.1 0.0 5.4e-05 22.8 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family CBS PF00571.28 gi|156937391|ref|YP_001435187.1| - 5.2e-35 119.7 6.7 3e-17 62.8 0.6 2.1 2 0 0 2 2 2 2 CBS domain AsmA_2 PF13502.6 gi|156937392|ref|YP_001435188.1| - 0.03 13.8 0.0 0.064 12.8 0.0 1.6 1 1 0 1 1 1 0 AsmA-like C-terminal region zf-UBP_var PF17807.1 gi|156937392|ref|YP_001435188.1| - 0.15 11.9 0.1 2.7 7.8 0.0 2.3 2 0 0 2 2 2 0 Variant UBP zinc finger Pribosyltran PF00156.27 gi|156937393|ref|YP_001435189.1| - 1.7e-07 30.9 0.2 3.1e-07 30.0 0.2 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_7 PF13537.6 gi|156937393|ref|YP_001435189.1| - 0.0053 16.7 0.0 0.0094 15.9 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain Fer4 PF00037.27 gi|156937394|ref|YP_001435190.1| - 9.8e-17 60.0 40.7 7.1e-07 28.8 3.0 5.6 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156937394|ref|YP_001435190.1| - 4.2e-15 56.1 32.0 5.6e-08 33.2 9.2 4.0 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937394|ref|YP_001435190.1| - 4.6e-13 48.6 46.8 1.6e-06 27.9 1.6 6.4 7 0 0 7 7 7 4 4Fe-4S binding domain Fer4_9 PF13187.6 gi|156937394|ref|YP_001435190.1| - 1.2e-11 44.6 32.9 1.1e-06 28.7 9.4 4.0 4 0 0 4 4 4 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156937394|ref|YP_001435190.1| - 5.8e-11 42.7 17.9 0.0029 18.0 0.1 4.7 4 0 0 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156937394|ref|YP_001435190.1| - 6.6e-11 42.2 38.0 5e-06 26.5 10.6 4.0 4 1 1 5 5 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937394|ref|YP_001435190.1| - 1.8e-09 38.4 28.9 0.057 14.3 1.5 5.4 5 0 0 5 5 5 4 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|156937394|ref|YP_001435190.1| - 3.2e-09 36.3 46.9 1.7e-05 24.7 2.9 5.4 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156937394|ref|YP_001435190.1| - 6.6e-08 32.6 36.4 0.00013 22.0 12.0 4.5 4 2 2 6 6 5 4 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156937394|ref|YP_001435190.1| - 4.4e-05 23.6 45.0 0.00072 19.9 0.9 6.5 6 0 0 6 6 6 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|156937394|ref|YP_001435190.1| - 5.4e-05 23.8 20.3 0.00097 19.8 0.1 4.6 4 1 0 4 4 4 3 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|156937394|ref|YP_001435190.1| - 0.0017 18.8 34.6 0.14 12.7 1.7 5.3 4 1 3 7 7 7 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156937394|ref|YP_001435190.1| - 0.0081 17.0 48.5 0.19 12.8 4.3 5.6 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_18 PF13746.6 gi|156937394|ref|YP_001435190.1| - 0.0087 16.2 2.0 0.0087 16.2 2.0 3.5 2 1 0 3 3 3 2 4Fe-4S dicluster domain ADD_ATRX PF17981.1 gi|156937394|ref|YP_001435190.1| - 0.026 14.4 0.4 0.026 14.4 0.4 3.5 4 0 0 4 4 3 0 Cysteine Rich ADD domain Fer4_13 PF13370.6 gi|156937394|ref|YP_001435190.1| - 0.032 14.8 2.6 0.032 14.8 2.6 4.9 4 0 0 4 4 4 0 4Fe-4S single cluster domain of Ferredoxin I HTH_3 PF01381.22 gi|156937395|ref|YP_001435191.1| - 1.8e-08 34.3 0.0 4.5e-08 33.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|156937395|ref|YP_001435191.1| - 0.00033 20.6 0.1 0.00084 19.3 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|156937395|ref|YP_001435191.1| - 0.0029 17.9 0.0 0.0057 17.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain MerR_1 PF13411.6 gi|156937395|ref|YP_001435191.1| - 0.043 13.9 0.0 0.8 9.8 0.0 2.7 2 2 0 2 2 2 0 MerR HTH family regulatory protein HTH_38 PF13936.6 gi|156937395|ref|YP_001435191.1| - 0.048 13.4 0.0 0.11 12.2 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_25 PF13413.6 gi|156937395|ref|YP_001435191.1| - 0.065 13.1 0.0 0.54 10.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain MerR PF00376.23 gi|156937395|ref|YP_001435191.1| - 0.15 11.9 0.0 0.65 9.8 0.0 2.0 2 0 0 2 2 2 0 MerR family regulatory protein NAC PF01849.18 gi|156937396|ref|YP_001435192.1| - 1.3e-06 28.3 1.5 2.7e-06 27.3 0.1 2.1 1 1 0 2 2 2 1 NAC domain HOIP-UBA PF16678.5 gi|156937396|ref|YP_001435192.1| - 0.027 14.5 0.4 0.05 13.6 0.4 1.5 1 1 0 1 1 1 0 HOIP UBA domain pair UBA_4 PF14555.6 gi|156937396|ref|YP_001435192.1| - 0.06 13.2 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 UBA-like domain RMMBL PF07521.12 gi|156937397|ref|YP_001435193.1| - 1.1e-13 50.8 0.1 2.3e-13 49.9 0.1 1.5 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Beta-Casp PF10996.8 gi|156937397|ref|YP_001435193.1| - 4.6e-12 46.2 0.0 9.3e-12 45.2 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B_6 PF16661.5 gi|156937397|ref|YP_001435193.1| - 5.1e-12 45.6 0.0 1.2e-11 44.5 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156937397|ref|YP_001435193.1| - 2.8e-10 40.5 0.3 1.5e-09 38.2 0.3 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|156937397|ref|YP_001435193.1| - 2.4e-06 27.2 0.0 6.3e-06 25.8 0.0 1.7 2 0 0 2 2 2 1 Beta-lactamase superfamily domain DUF5046 PF16465.5 gi|156937397|ref|YP_001435193.1| - 0.0068 15.9 0.0 0.0094 15.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5046) Lactamase_B_3 PF13483.6 gi|156937397|ref|YP_001435193.1| - 0.027 14.3 0.0 0.11 12.3 0.0 2.1 1 1 1 2 2 2 0 Beta-lactamase superfamily domain Rhodanese PF00581.20 gi|156937397|ref|YP_001435193.1| - 0.085 13.4 0.0 0.67 10.5 0.0 2.2 2 0 0 2 2 2 0 Rhodanese-like domain Ribosomal_L38e PF01781.18 gi|156937398|ref|YP_001435194.1| - 0.037 14.1 1.5 0.054 13.6 1.5 1.4 1 0 0 1 1 1 0 Ribosomal L38e protein family NAD_Gly3P_dh_N PF01210.23 gi|156937398|ref|YP_001435194.1| - 0.09 12.8 0.2 0.095 12.7 0.2 1.1 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AMMECR1 PF01871.17 gi|156937399|ref|YP_001435195.1| - 1.2e-48 164.8 0.0 1.4e-48 164.6 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 PhoU PF01895.19 gi|156937400|ref|YP_001435196.1| - 4.4e-19 68.7 8.0 3e-11 43.6 0.5 2.1 2 0 0 2 2 2 2 PhoU domain GAS PF13851.6 gi|156937400|ref|YP_001435196.1| - 0.022 14.1 0.9 0.036 13.4 0.9 1.4 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding COG5 PF10392.9 gi|156937400|ref|YP_001435196.1| - 0.028 14.6 0.5 0.086 13.0 0.2 1.9 2 0 0 2 2 2 0 Golgi transport complex subunit 5 hnRNP_Q_AcD PF18360.1 gi|156937400|ref|YP_001435196.1| - 0.083 12.9 0.4 10 6.2 0.0 3.5 3 1 0 3 3 3 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain IlvN PF07991.12 gi|156937401|ref|YP_001435197.1| - 1.8e-74 248.8 0.0 5.2e-74 247.3 0.0 1.8 3 0 0 3 3 3 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|156937401|ref|YP_001435197.1| - 2.9e-55 186.5 1.7 3.8e-55 186.1 1.7 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.17 gi|156937401|ref|YP_001435197.1| - 2.2e-05 24.9 0.0 6.8e-05 23.4 0.0 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|156937401|ref|YP_001435197.1| - 2.6e-05 23.7 0.0 6.1e-05 22.5 0.0 1.5 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|156937401|ref|YP_001435197.1| - 0.003 17.8 0.0 0.0065 16.6 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|156937401|ref|YP_001435197.1| - 0.062 12.9 0.1 0.15 11.7 0.0 1.7 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA AdoHcyase_NAD PF00670.21 gi|156937401|ref|YP_001435197.1| - 0.069 13.2 0.0 0.23 11.5 0.0 1.8 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DUF3961 PF13106.6 gi|156937401|ref|YP_001435197.1| - 0.088 12.5 0.1 0.18 11.4 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3961) V_ATPase_I PF01496.19 gi|156937402|ref|YP_001435198.1| - 2e-26 92.2 17.8 2e-14 52.5 0.0 4.0 3 1 0 4 4 4 4 V-type ATPase 116kDa subunit family NYD-SP28 PF14772.6 gi|156937402|ref|YP_001435198.1| - 0.18 11.8 2.0 0.26 11.3 1.5 1.5 1 1 0 1 1 1 0 Sperm tail DUF3917 PF13055.6 gi|156937402|ref|YP_001435198.1| - 1.9 9.0 6.0 9.1 6.8 2.8 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3917) PCNA_N PF00705.18 gi|156937403|ref|YP_001435199.1| - 6.1e-13 48.6 0.0 1.4e-12 47.4 0.0 1.6 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|156937403|ref|YP_001435199.1| - 1.1e-06 28.9 0.1 4.5e-06 26.9 0.0 2.1 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|156937403|ref|YP_001435199.1| - 7e-06 25.3 0.0 0.0029 16.7 0.0 2.0 1 1 0 1 1 1 1 Repair protein Rad1/Rec1/Rad17 DUF150 PF02576.17 gi|156937403|ref|YP_001435199.1| - 0.017 15.5 0.0 12 6.4 0.0 3.0 2 1 1 3 3 3 0 RimP N-terminal domain Rad9 PF04139.13 gi|156937403|ref|YP_001435199.1| - 0.045 13.2 0.0 0.065 12.7 0.0 1.4 1 0 0 1 1 1 0 Rad9 AdoMet_dc PF02675.15 gi|156937404|ref|YP_001435200.1| - 7.5e-33 113.0 0.0 8.6e-33 112.8 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase Chitin_synth_1N PF08407.11 gi|156937406|ref|YP_001435202.1| - 0.014 15.3 0.1 0.022 14.7 0.1 1.3 1 1 0 1 1 1 0 Chitin synthase N-terminal MgtE PF01769.16 gi|156937407|ref|YP_001435203.1| - 5e-25 88.3 26.0 1.3e-15 57.8 6.3 3.0 2 1 1 3 3 3 2 Divalent cation transporter DUF3481 PF11980.8 gi|156937407|ref|YP_001435203.1| - 1.1 9.0 3.5 0.65 9.7 0.1 2.4 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein Lactamase_B_2 PF12706.7 gi|156937408|ref|YP_001435204.1| - 2.3e-07 30.6 0.0 3.5e-07 29.9 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156937408|ref|YP_001435204.1| - 0.048 13.7 1.1 0.32 11.0 1.7 2.1 2 1 0 2 2 2 0 Metallo-beta-lactamase superfamily Proteasome PF00227.26 gi|156937409|ref|YP_001435205.1| - 4e-52 176.5 0.2 4.9e-52 176.2 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Pyr_redox_2 PF07992.14 gi|156937410|ref|YP_001435206.1| - 1.8e-46 158.7 3.6 2.1e-46 158.5 3.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|156937410|ref|YP_001435206.1| - 1.7e-37 129.3 0.3 1.6e-28 99.8 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|156937410|ref|YP_001435206.1| - 4.5e-19 68.8 7.0 3.7e-14 53.0 1.3 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|156937410|ref|YP_001435206.1| - 1.8e-11 43.9 2.8 1.5e-06 27.7 0.1 2.4 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|156937410|ref|YP_001435206.1| - 5.1e-10 38.6 2.1 0.00039 19.2 0.2 3.4 3 0 0 3 3 3 3 HI0933-like protein NAD_binding_8 PF13450.6 gi|156937410|ref|YP_001435206.1| - 1.5e-09 38.0 0.1 7.1e-06 26.2 0.0 2.4 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|156937410|ref|YP_001435206.1| - 2.3e-09 36.9 4.7 0.017 14.2 0.1 3.8 4 0 0 4 4 4 3 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|156937410|ref|YP_001435206.1| - 4.8e-09 35.8 4.5 2.3e-05 23.7 0.1 3.8 3 1 1 4 4 4 2 FAD binding domain NAD_binding_7 PF13241.6 gi|156937410|ref|YP_001435206.1| - 2.2e-07 31.3 3.3 0.00016 22.1 0.6 2.5 2 1 0 2 2 2 2 Putative NAD(P)-binding DAO PF01266.24 gi|156937410|ref|YP_001435206.1| - 1.6e-06 28.0 6.7 0.01 15.5 0.7 3.5 3 1 0 3 3 3 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|156937410|ref|YP_001435206.1| - 2.2e-06 27.1 3.8 0.009 15.3 0.1 3.0 2 1 1 3 3 3 2 Thi4 family XdhC_C PF13478.6 gi|156937410|ref|YP_001435206.1| - 1.9e-05 25.2 0.4 0.0086 16.6 0.1 2.3 2 0 0 2 2 2 1 XdhC Rossmann domain Shikimate_DH PF01488.20 gi|156937410|ref|YP_001435206.1| - 5.2e-05 23.3 0.3 0.014 15.4 0.1 2.5 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase FAD_oxidored PF12831.7 gi|156937410|ref|YP_001435206.1| - 8e-05 22.2 11.7 0.13 11.5 0.9 3.7 4 0 0 4 4 4 2 FAD dependent oxidoreductase K_oxygenase PF13434.6 gi|156937410|ref|YP_001435206.1| - 0.00025 20.3 0.1 0.031 13.4 0.0 2.9 3 0 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|156937410|ref|YP_001435206.1| - 0.00044 19.4 0.2 0.0077 15.3 0.0 2.2 2 0 0 2 2 2 1 Lycopene cyclase protein Oxidored_nitro PF00148.19 gi|156937410|ref|YP_001435206.1| - 0.001 17.9 0.8 0.0063 15.3 0.3 2.1 1 1 1 2 2 2 1 Nitrogenase component 1 type Oxidoreductase FMO-like PF00743.19 gi|156937410|ref|YP_001435206.1| - 0.0011 17.5 0.0 0.0049 15.3 0.1 1.8 2 0 0 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_9 PF13454.6 gi|156937410|ref|YP_001435206.1| - 0.0023 18.0 2.2 3.9 7.4 0.0 3.6 3 1 1 4 4 4 1 FAD-NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|156937410|ref|YP_001435206.1| - 0.0041 16.5 11.0 0.043 13.1 1.4 2.8 2 1 0 3 3 3 2 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|156937410|ref|YP_001435206.1| - 0.0078 16.5 1.5 5.3 7.3 0.1 2.9 3 0 0 3 3 3 1 TrkA-N domain Trp_halogenase PF04820.14 gi|156937410|ref|YP_001435206.1| - 0.02 13.8 5.2 0.25 10.2 0.3 2.5 3 0 0 3 3 3 0 Tryptophan halogenase IlvN PF07991.12 gi|156937410|ref|YP_001435206.1| - 0.025 14.1 0.1 0.4 10.2 0.1 2.2 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AdoHcyase_NAD PF00670.21 gi|156937410|ref|YP_001435206.1| - 0.03 14.4 0.9 1.4 9.0 0.1 2.4 2 0 0 2 2 2 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Amino_oxidase PF01593.24 gi|156937410|ref|YP_001435206.1| - 0.034 13.5 1.1 0.87 8.8 0.1 3.0 3 1 0 3 3 3 0 Flavin containing amine oxidoreductase 3HCDH_N PF02737.18 gi|156937410|ref|YP_001435206.1| - 0.043 13.7 1.8 0.17 11.8 0.6 2.1 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PALP PF00291.25 gi|156937410|ref|YP_001435206.1| - 0.086 12.2 1.6 0.22 10.9 0.2 2.1 2 1 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme ApbA PF02558.16 gi|156937410|ref|YP_001435206.1| - 0.11 12.2 1.4 5.9 6.5 0.1 2.2 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA 2-Hacid_dh_C PF02826.19 gi|156937410|ref|YP_001435206.1| - 0.15 11.4 0.6 3.2 7.1 0.1 2.5 3 0 0 3 3 3 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UPF0020 PF01170.18 gi|156937412|ref|YP_001435208.1| - 2.7e-32 112.1 0.0 1.6e-30 106.3 0.0 2.1 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 gi|156937412|ref|YP_001435208.1| - 1.4e-07 32.1 0.0 3.5e-07 30.8 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|156937412|ref|YP_001435208.1| - 4.1e-07 29.7 0.0 5.8e-07 29.2 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|156937412|ref|YP_001435208.1| - 7.1e-07 29.8 0.2 2.2e-06 28.2 0.0 2.0 2 1 0 2 2 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|156937412|ref|YP_001435208.1| - 1e-06 28.5 0.0 1.6e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|156937412|ref|YP_001435208.1| - 7.2e-05 22.6 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 gi|156937412|ref|YP_001435208.1| - 0.00061 19.6 0.0 0.21 11.3 0.0 2.3 2 0 0 2 2 2 2 DNA methylase PrmA PF06325.13 gi|156937412|ref|YP_001435208.1| - 0.025 14.0 0.0 0.048 13.1 0.0 1.3 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) MethyltransfD12 PF02086.15 gi|156937412|ref|YP_001435208.1| - 0.21 11.2 0.0 0.54 9.9 0.0 1.6 2 0 0 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase FMN_red PF03358.15 gi|156937413|ref|YP_001435209.1| - 5.3e-36 123.7 0.0 7.7e-36 123.2 0.0 1.2 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|156937413|ref|YP_001435209.1| - 5.7e-14 52.3 0.0 7.3e-14 51.9 0.0 1.1 1 0 0 1 1 1 1 Flavodoxin-like fold AA_kinase PF00696.28 gi|156937414|ref|YP_001435210.1| - 2.7e-37 128.7 2.6 3.1e-37 128.5 2.6 1.0 1 0 0 1 1 1 1 Amino acid kinase family UDPG_MGDP_dh_N PF03721.14 gi|156937415|ref|YP_001435211.1| - 2e-58 197.1 0.1 6.7e-58 195.4 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UDPG_MGDP_dh PF00984.19 gi|156937415|ref|YP_001435211.1| - 3e-26 91.4 0.0 9e-26 89.9 0.0 1.8 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, central domain UDPG_MGDP_dh_C PF03720.15 gi|156937415|ref|YP_001435211.1| - 2.9e-25 88.7 0.1 3.4e-24 85.3 0.0 2.4 2 0 0 2 2 2 1 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NAD_binding_2 PF03446.15 gi|156937415|ref|YP_001435211.1| - 5.2e-09 36.5 0.1 5.7e-08 33.1 0.0 2.7 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|156937415|ref|YP_001435211.1| - 4.3e-07 30.0 0.2 4e-06 26.8 0.0 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|156937415|ref|YP_001435211.1| - 9.4e-05 22.6 0.0 0.00032 20.9 0.0 1.9 1 0 0 1 1 1 1 TrkA-N domain NAD_Gly3P_dh_N PF01210.23 gi|156937415|ref|YP_001435211.1| - 0.0011 18.9 0.1 0.0082 16.1 0.0 2.3 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|156937415|ref|YP_001435211.1| - 0.0036 17.8 0.1 0.017 15.7 0.1 2.3 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent ApbA PF02558.16 gi|156937415|ref|YP_001435211.1| - 0.0051 16.5 0.0 0.012 15.2 0.0 1.6 2 0 0 2 2 2 1 Ketopantoate reductase PanE/ApbA Pyr_redox PF00070.27 gi|156937415|ref|YP_001435211.1| - 0.014 15.9 0.1 0.3 11.7 0.1 2.8 3 0 0 3 3 2 0 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|156937415|ref|YP_001435211.1| - 0.027 13.8 0.0 0.04 13.3 0.0 1.2 1 0 0 1 1 1 0 ThiF family UPF0146 PF03686.13 gi|156937415|ref|YP_001435211.1| - 0.028 14.3 0.1 0.082 12.8 0.1 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0146) 2-Hacid_dh_C PF02826.19 gi|156937415|ref|YP_001435211.1| - 0.035 13.5 0.0 0.072 12.4 0.0 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Methyltransf_31 PF13847.6 gi|156937415|ref|YP_001435211.1| - 0.045 13.5 0.0 0.97 9.2 0.0 2.9 2 1 0 2 2 2 0 Methyltransferase domain XdhC_C PF13478.6 gi|156937415|ref|YP_001435211.1| - 0.072 13.6 0.0 0.18 12.3 0.0 1.7 2 0 0 2 2 1 0 XdhC Rossmann domain Repressor_Mnt PF11423.8 gi|156937415|ref|YP_001435211.1| - 0.083 12.7 0.7 0.35 10.7 0.2 2.3 2 0 0 2 2 2 0 Regulatory protein Mnt Pyr_redox_2 PF07992.14 gi|156937415|ref|YP_001435211.1| - 0.09 12.0 0.1 0.19 10.9 0.1 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase CbiA PF01656.23 gi|156937415|ref|YP_001435211.1| - 0.11 12.5 0.0 0.25 11.4 0.0 1.6 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain TPMT PF05724.11 gi|156937415|ref|YP_001435211.1| - 0.11 12.1 0.0 0.65 9.6 0.0 2.2 2 1 0 2 2 2 0 Thiopurine S-methyltransferase (TPMT) Epimerase_2 PF02350.19 gi|156937416|ref|YP_001435212.1| - 7.7e-103 344.0 0.0 9e-103 343.8 0.0 1.0 1 0 0 1 1 1 1 UDP-N-acetylglucosamine 2-epimerase DUF4910 PF16254.5 gi|156937416|ref|YP_001435212.1| - 0.098 11.5 0.0 0.15 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4910) Glyco_trans_1_4 PF13692.6 gi|156937418|ref|YP_001435214.1| - 3.5e-08 34.0 0.1 7.5e-08 32.9 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|156937418|ref|YP_001435214.1| - 0.0048 16.9 0.1 0.12 12.4 0.1 2.2 1 1 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 gi|156937418|ref|YP_001435214.1| - 0.027 14.0 0.0 0.088 12.3 0.0 1.8 1 1 1 2 2 2 0 Glycosyl transferases group 1 CysA_C_terminal PF17850.1 gi|156937418|ref|YP_001435214.1| - 0.12 13.0 0.0 0.3 11.7 0.0 1.7 1 0 0 1 1 1 0 CysA C-terminal regulatory domain Glyco_transf_4 PF13439.6 gi|156937419|ref|YP_001435215.1| - 8.3e-05 22.6 0.1 0.00096 19.2 0.0 2.2 1 1 1 2 2 2 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|156937419|ref|YP_001435215.1| - 0.00043 20.6 0.0 0.0013 19.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|156937419|ref|YP_001435215.1| - 0.00077 19.9 0.8 0.0024 18.3 0.3 2.1 2 1 0 2 2 2 1 Glycosyl transferase 4-like domain Glyco_trans_1_4 PF13692.6 gi|156937419|ref|YP_001435215.1| - 0.0011 19.4 0.0 0.0029 18.1 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 HTH_AraC PF00165.23 gi|156937420|ref|YP_001435216.1| - 0.044 13.9 0.0 0.087 13.0 0.0 1.5 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family ADH_zinc_N PF00107.26 gi|156937421|ref|YP_001435217.1| - 4.4e-15 55.8 0.0 3.1e-14 53.1 0.0 2.2 2 0 0 2 2 2 1 Zinc-binding dehydrogenase GFO_IDH_MocA PF01408.22 gi|156937421|ref|YP_001435217.1| - 1.2e-14 55.2 0.2 1.2e-10 42.3 0.0 2.6 3 0 0 3 3 3 2 Oxidoreductase family, NAD-binding Rossmann fold ADH_zinc_N_2 PF13602.6 gi|156937421|ref|YP_001435217.1| - 1.4e-05 26.1 0.0 8.7e-05 23.6 0.0 2.3 2 0 0 2 2 2 1 Zinc-binding dehydrogenase 2-Hacid_dh_C PF02826.19 gi|156937421|ref|YP_001435217.1| - 4.6e-05 22.9 0.1 0.00025 20.4 0.1 2.1 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|156937421|ref|YP_001435217.1| - 0.00014 22.1 0.2 0.00038 20.7 0.2 1.8 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_2 PF03446.15 gi|156937421|ref|YP_001435217.1| - 0.00026 21.2 0.1 0.014 15.6 0.1 2.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 gi|156937421|ref|YP_001435217.1| - 0.0023 17.3 0.4 0.0048 16.2 0.4 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|156937421|ref|YP_001435217.1| - 0.0024 17.5 0.0 0.0058 16.2 0.0 1.7 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3HCDH_N PF02737.18 gi|156937421|ref|YP_001435217.1| - 0.0031 17.4 0.4 0.0095 15.8 0.1 2.0 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|156937421|ref|YP_001435217.1| - 0.0054 17.3 0.2 1.7 9.3 0.0 2.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Methyltransf_25 PF13649.6 gi|156937421|ref|YP_001435217.1| - 0.15 12.7 0.0 0.46 11.2 0.0 1.9 1 1 0 1 1 1 0 Methyltransferase domain DUF4190 PF13828.6 gi|156937421|ref|YP_001435217.1| - 0.84 9.4 7.2 0.29 10.9 2.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4190) ADH_N_assoc PF13823.6 gi|156937421|ref|YP_001435217.1| - 2.3 8.2 4.7 2.4 8.2 1.5 2.5 2 0 0 2 2 2 0 Alcohol dehydrogenase GroES-associated AA_permease_2 PF13520.6 gi|156937422|ref|YP_001435218.1| - 0.014 14.2 0.0 0.014 14.2 0.0 1.0 1 0 0 1 1 1 0 Amino acid permease DUF3267 PF11667.8 gi|156937422|ref|YP_001435218.1| - 0.035 14.4 2.7 0.043 14.1 2.7 1.1 1 0 0 1 1 1 0 Putative zincin peptidase Pex24p PF06398.11 gi|156937422|ref|YP_001435218.1| - 0.054 12.5 0.5 0.054 12.5 0.5 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin MARVEL PF01284.23 gi|156937422|ref|YP_001435218.1| - 0.49 10.4 4.0 0.62 10.1 4.0 1.1 1 0 0 1 1 1 0 Membrane-associating domain Radical_SAM PF04055.21 gi|156937423|ref|YP_001435219.1| - 9.2e-25 87.9 0.0 3.2e-24 86.2 0.0 1.9 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|156937423|ref|YP_001435219.1| - 7.8e-09 35.9 0.0 1.7e-08 34.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|156937423|ref|YP_001435219.1| - 6.8e-08 32.9 0.1 1.5e-07 31.8 0.1 1.5 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|156937423|ref|YP_001435219.1| - 2.6e-06 27.6 0.0 6.9e-06 26.2 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain DS PF01916.17 gi|156937424|ref|YP_001435220.1| - 4e-96 321.7 0.0 4.6e-96 321.5 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase GTP_cyclohydroI PF01227.22 gi|156937425|ref|YP_001435221.1| - 1.2e-59 200.7 0.0 1.4e-59 200.6 0.0 1.0 1 0 0 1 1 1 1 GTP cyclohydrolase I Spermine_synth PF01564.17 gi|156937426|ref|YP_001435222.1| - 3.9e-52 176.4 0.0 7.5e-52 175.5 0.0 1.4 2 0 0 2 2 2 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 gi|156937426|ref|YP_001435222.1| - 2.7e-08 33.6 0.0 5.4e-08 32.6 0.0 1.6 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_25 PF13649.6 gi|156937426|ref|YP_001435222.1| - 1e-06 29.3 0.0 1.9e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|156937426|ref|YP_001435222.1| - 1.7e-06 28.7 0.0 2.4e-05 25.0 0.0 2.4 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|156937426|ref|YP_001435222.1| - 2.5e-05 24.1 0.0 4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156937426|ref|YP_001435222.1| - 7.8e-05 23.2 0.0 0.00015 22.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_30 PF05430.11 gi|156937426|ref|YP_001435222.1| - 0.0019 18.1 0.0 0.0036 17.2 0.0 1.5 1 0 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase MTS PF05175.14 gi|156937426|ref|YP_001435222.1| - 0.01 15.4 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain DUF43 PF01861.16 gi|156937426|ref|YP_001435222.1| - 0.011 14.9 0.0 0.017 14.4 0.0 1.3 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain Methyltransf_24 PF13578.6 gi|156937426|ref|YP_001435222.1| - 0.011 16.7 0.0 0.023 15.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_2 PF00891.18 gi|156937426|ref|YP_001435222.1| - 0.032 13.5 0.0 0.072 12.4 0.0 1.6 1 1 0 1 1 1 0 O-methyltransferase domain Response_reg PF00072.24 gi|156937426|ref|YP_001435222.1| - 0.099 12.8 0.1 2.8 8.1 0.0 2.9 3 1 1 4 4 4 0 Response regulator receiver domain Metallophos PF00149.28 gi|156937427|ref|YP_001435223.1| - 4.8e-23 82.7 0.0 9.5e-23 81.8 0.0 1.4 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase Arginosuc_synth PF00764.19 gi|156937428|ref|YP_001435224.1| - 4.6e-162 539.7 0.0 5.5e-162 539.5 0.0 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|156937428|ref|YP_001435224.1| - 9e-06 25.3 0.1 3.4e-05 23.4 0.0 1.8 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|156937428|ref|YP_001435224.1| - 0.00088 19.0 0.0 0.0012 18.5 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|156937428|ref|YP_001435224.1| - 0.0039 16.0 0.0 0.0064 15.3 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase CRISPR_Cas6 PF10040.9 gi|156937429|ref|YP_001435225.1| - 1.8e-08 34.9 0.1 2.8e-08 34.3 0.1 1.3 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 Cas6b_C PF17262.2 gi|156937429|ref|YP_001435225.1| - 0.026 14.6 0.0 0.16 12.1 0.0 2.2 3 0 0 3 3 3 0 Cas6b C-terminal domain GMP_synt_C PF00958.22 gi|156937430|ref|YP_001435226.1| - 4e-21 74.9 1.0 1.5e-17 63.4 0.5 3.0 1 1 1 2 2 2 2 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|156937430|ref|YP_001435226.1| - 1.9e-12 46.8 0.1 5.9e-07 28.9 0.0 2.3 2 0 0 2 2 2 2 NAD synthase ATP_bind_3 PF01171.20 gi|156937430|ref|YP_001435226.1| - 7.8e-09 35.5 0.0 1.2e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 PP-loop family ThiI PF02568.14 gi|156937430|ref|YP_001435226.1| - 0.00051 19.7 0.0 0.0033 17.0 0.0 2.3 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|156937430|ref|YP_001435226.1| - 0.00081 18.9 0.0 0.042 13.4 0.0 2.3 1 1 1 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|156937430|ref|YP_001435226.1| - 0.0012 17.7 0.0 0.044 12.6 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase PAPS_reduct PF01507.19 gi|156937430|ref|YP_001435226.1| - 0.01 15.9 0.0 0.034 14.2 0.0 2.0 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family Asn_synthase PF00733.21 gi|156937430|ref|YP_001435226.1| - 0.025 14.2 0.1 0.12 12.0 0.0 2.0 1 1 1 2 2 2 0 Asparagine synthase LSM PF01423.22 gi|156937432|ref|YP_001435228.1| - 0.05 13.3 0.6 0.13 11.9 0.6 1.7 1 0 0 1 1 1 0 LSM domain Nop14 PF04147.12 gi|156937432|ref|YP_001435228.1| - 2.9 6.0 8.7 3.9 5.6 8.7 1.0 1 0 0 1 1 1 0 Nop14-like family DUF1152 PF06626.12 gi|156937433|ref|YP_001435229.1| - 7.3e-106 353.7 2.2 8.4e-106 353.5 2.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1152) TctC PF03401.14 gi|156937433|ref|YP_001435229.1| - 0.19 10.8 0.0 0.3 10.1 0.0 1.3 1 0 0 1 1 1 0 Tripartite tricarboxylate transporter family receptor NadA PF02445.16 gi|156937434|ref|YP_001435230.1| - 6.1e-98 327.7 0.0 6.9e-98 327.5 0.0 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein zf-ribbon_3 PF13248.6 gi|156937435|ref|YP_001435231.1| - 2.8e-10 39.2 14.3 7.3e-08 31.6 0.9 3.2 2 1 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|156937435|ref|YP_001435231.1| - 3.1e-05 23.9 8.6 0.00014 21.8 9.2 1.7 1 1 1 2 2 2 2 Double zinc ribbon zinc-ribbon_6 PF10005.9 gi|156937435|ref|YP_001435231.1| - 7.2e-05 23.4 3.4 0.0081 16.8 0.4 2.7 1 1 2 3 3 3 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|156937435|ref|YP_001435231.1| - 0.00023 20.8 16.0 0.21 11.4 4.7 3.6 2 2 1 3 3 3 3 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|156937435|ref|YP_001435231.1| - 0.0011 19.7 2.2 0.091 13.5 0.0 2.4 2 0 0 2 2 2 1 zinc-ribbon family VP_N-CPKC PF11475.8 gi|156937435|ref|YP_001435231.1| - 0.0033 17.3 0.7 0.0033 17.3 0.7 2.8 1 1 0 2 2 2 1 Virion protein N terminal domain UPF0547 PF10571.9 gi|156937435|ref|YP_001435231.1| - 0.0037 17.3 11.4 0.0049 16.9 0.9 2.5 3 0 0 3 3 2 2 Uncharacterised protein family UPF0547 TerY_C PF15616.6 gi|156937435|ref|YP_001435231.1| - 0.0093 16.1 5.8 1 9.5 0.4 2.4 1 1 1 2 2 2 2 TerY-C metal binding domain zf-C4_Topoisom PF01396.19 gi|156937435|ref|YP_001435231.1| - 0.011 15.5 11.4 1.4 8.8 0.5 4.3 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger tRNA-synt_1g PF09334.11 gi|156937435|ref|YP_001435231.1| - 0.021 13.6 0.1 0.022 13.5 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (M) Prok-RING_1 PF14446.6 gi|156937435|ref|YP_001435231.1| - 0.022 14.7 9.7 0.026 14.4 2.3 2.3 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zinc-ribbons_6 PF07191.12 gi|156937435|ref|YP_001435231.1| - 0.023 14.7 7.1 0.16 11.9 3.0 2.1 1 1 1 2 2 2 0 zinc-ribbons PolC_DP2 PF03833.13 gi|156937435|ref|YP_001435231.1| - 0.026 12.4 0.1 0.026 12.4 0.1 1.2 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zinc_ribbon_4 PF13717.6 gi|156937435|ref|YP_001435231.1| - 0.041 13.8 8.7 5 7.1 0.1 3.9 4 0 0 4 4 4 0 zinc-ribbon domain HypA PF01155.19 gi|156937435|ref|YP_001435231.1| - 0.046 13.7 9.1 0.53 10.3 1.1 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Robl_LC7 PF03259.17 gi|156937435|ref|YP_001435231.1| - 0.074 12.8 0.0 0.1 12.4 0.0 1.3 1 0 0 1 1 1 0 Roadblock/LC7 domain PADR1 PF08063.12 gi|156937435|ref|YP_001435231.1| - 0.13 12.0 11.1 2.5 7.9 0.4 3.3 1 1 2 3 3 3 0 PADR1 (NUC008) domain MCM_OB PF17207.3 gi|156937435|ref|YP_001435231.1| - 0.14 12.0 0.7 0.24 11.3 0.7 1.3 1 0 0 1 1 1 0 MCM OB domain Zn_Tnp_IS1595 PF12760.7 gi|156937435|ref|YP_001435231.1| - 0.17 11.8 16.0 12 6.0 0.2 3.3 1 1 2 3 3 3 0 Transposase zinc-ribbon domain zf-FCS PF06467.14 gi|156937435|ref|YP_001435231.1| - 0.21 11.6 5.4 3 7.9 0.9 3.3 2 1 1 3 3 3 0 MYM-type Zinc finger with FCS sequence motif RNA_POL_M_15KD PF02150.16 gi|156937435|ref|YP_001435231.1| - 0.28 11.1 0.2 0.28 11.1 0.2 3.7 2 1 1 3 3 3 0 RNA polymerases M/15 Kd subunit zf-RING_7 PF02591.15 gi|156937435|ref|YP_001435231.1| - 0.29 11.4 8.6 15 5.9 0.0 3.9 4 0 0 4 4 4 0 C4-type zinc ribbon domain YacG PF03884.14 gi|156937435|ref|YP_001435231.1| - 0.36 10.6 10.0 21 5.0 0.1 3.3 3 0 0 3 3 3 0 DNA gyrase inhibitor YacG zf-ISL3 PF14690.6 gi|156937435|ref|YP_001435231.1| - 0.37 11.5 11.4 6.5 7.5 1.1 3.8 2 1 1 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DNA_RNApol_7kD PF03604.13 gi|156937435|ref|YP_001435231.1| - 0.42 10.3 12.9 10 5.9 4.7 3.7 2 2 1 3 3 3 0 DNA directed RNA polymerase, 7 kDa subunit zf-ACC PF17848.1 gi|156937435|ref|YP_001435231.1| - 0.43 10.7 15.5 0.5 10.5 0.5 3.9 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-tcix PF14952.6 gi|156937435|ref|YP_001435231.1| - 0.45 10.2 13.1 1.4 8.6 0.2 3.9 3 1 1 4 4 4 0 Putative treble-clef, zinc-finger, Zn-binding DUF2089 PF09862.9 gi|156937435|ref|YP_001435231.1| - 0.63 10.1 2.0 5.1 7.2 1.1 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF2089) Cys_rich_CPXG PF14255.6 gi|156937435|ref|YP_001435231.1| - 0.83 9.6 9.9 17 5.4 0.1 3.5 4 0 0 4 4 3 0 Cysteine-rich CPXCG Mu-like_Com PF10122.9 gi|156937435|ref|YP_001435231.1| - 0.84 9.1 11.4 2.1 7.9 2.9 3.1 2 2 0 2 2 2 0 Mu-like prophage protein Com zf-MYND PF01753.18 gi|156937435|ref|YP_001435231.1| - 1.6 8.9 8.1 2.5 8.3 0.8 2.3 2 0 0 2 2 2 0 MYND finger YhfH PF14149.6 gi|156937435|ref|YP_001435231.1| - 1.8 8.6 11.2 0.83 9.7 0.3 3.2 1 1 2 3 3 3 0 YhfH-like protein zf-C2HC5 PF06221.13 gi|156937435|ref|YP_001435231.1| - 2.6 8.1 9.7 41 4.3 5.8 3.1 1 1 2 3 3 3 0 Putative zinc finger motif, C2HC5-type CpXC PF14353.6 gi|156937435|ref|YP_001435231.1| - 3.1 7.9 10.5 15 5.7 1.2 3.8 2 1 2 4 4 3 0 CpXC protein zf-C2HC_2 PF13913.6 gi|156937435|ref|YP_001435231.1| - 3.8 7.5 15.1 8.6 6.4 0.6 3.5 3 0 0 3 3 3 0 zinc-finger of a C2HC-type zf-LITAF-like PF10601.9 gi|156937435|ref|YP_001435231.1| - 4 7.8 12.5 10 6.5 2.2 3.5 1 1 1 2 2 2 0 LITAF-like zinc ribbon domain Nudix_N_2 PF14803.6 gi|156937435|ref|YP_001435231.1| - 4.4 7.3 7.3 40 4.2 0.2 3.6 3 1 1 4 4 4 0 Nudix N-terminal XAF1_C PF18608.1 gi|156937435|ref|YP_001435231.1| - 5.5 6.6 7.0 26 4.5 2.5 2.6 2 1 0 2 2 2 0 XIAP-associated factor 1 C-terminal domain DiS_P_DiS PF06750.13 gi|156937435|ref|YP_001435231.1| - 6 7.1 6.4 42 4.3 3.7 3.5 1 1 2 3 3 2 0 Bacterial Peptidase A24 N-terminal domain zf_UBZ PF18439.1 gi|156937435|ref|YP_001435231.1| - 6.5 6.4 9.4 1.6 8.4 0.1 3.5 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger Sigma70_r4 PF04545.16 gi|156937436|ref|YP_001435232.1| - 0.05 13.1 1.2 0.066 12.8 0.2 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 AbiEi_1 PF09407.10 gi|156937436|ref|YP_001435232.1| - 0.087 13.1 0.2 27 5.1 0.0 2.7 3 0 0 3 3 3 0 AbiEi antitoxin C-terminal domain APG6_N PF17675.1 gi|156937437|ref|YP_001435233.1| - 0.0001 22.8 2.5 0.00013 22.4 2.5 1.1 1 0 0 1 1 1 1 Apg6 coiled-coil region Apolipoprotein PF01442.18 gi|156937437|ref|YP_001435233.1| - 0.0041 17.0 0.2 0.0059 16.5 0.2 1.2 1 0 0 1 1 1 1 Apolipoprotein A1/A4/E domain HisK_sensor PF18698.1 gi|156937437|ref|YP_001435233.1| - 0.0042 17.5 1.3 0.0086 16.4 0.5 1.7 2 0 0 2 2 2 1 Histidine kinase sensor domain HIP1_clath_bdg PF16515.5 gi|156937437|ref|YP_001435233.1| - 0.0059 17.2 3.3 0.28 11.8 0.2 2.1 2 0 0 2 2 2 1 Clathrin-binding domain of Huntingtin-interacting protein 1 Mod_r PF07200.13 gi|156937437|ref|YP_001435233.1| - 0.01 16.0 1.9 0.59 10.2 0.2 2.1 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Fib_alpha PF08702.10 gi|156937437|ref|YP_001435233.1| - 0.011 15.9 0.0 0.015 15.4 0.0 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family BLOC1_2 PF10046.9 gi|156937437|ref|YP_001435233.1| - 0.013 15.8 1.5 0.48 10.8 0.4 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Arm-DNA-bind_5 PF17293.2 gi|156937437|ref|YP_001435233.1| - 0.035 14.5 0.8 0.058 13.8 0.4 1.5 1 1 0 1 1 1 0 Arm DNA-binding domain DHR10 PF18595.1 gi|156937437|ref|YP_001435233.1| - 0.04 14.0 4.8 2.7 8.1 0.2 2.2 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain adh_short PF00106.25 gi|156937437|ref|YP_001435233.1| - 0.049 13.1 0.0 0.37 10.2 0.0 1.9 2 0 0 2 2 2 0 short chain dehydrogenase SlyX PF04102.12 gi|156937437|ref|YP_001435233.1| - 0.051 14.2 0.5 3.7 8.3 0.1 2.2 2 0 0 2 2 2 0 SlyX NPV_P10 PF05531.12 gi|156937437|ref|YP_001435233.1| - 0.099 13.1 0.2 6.2 7.4 0.0 2.2 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein COG2 PF06148.11 gi|156937437|ref|YP_001435233.1| - 0.1 12.7 1.3 0.39 10.8 0.2 2.0 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Spc24 PF08286.11 gi|156937437|ref|YP_001435233.1| - 0.13 12.5 2.4 7.4 6.9 0.8 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 ARTD15_N PF18084.1 gi|156937437|ref|YP_001435233.1| - 0.15 12.3 0.2 0.33 11.2 0.0 1.6 2 0 0 2 2 2 0 ARTD15 N-terminal domain Prefoldin PF02996.17 gi|156937437|ref|YP_001435233.1| - 0.17 11.8 5.0 0.64 9.9 1.1 2.1 2 0 0 2 2 2 0 Prefoldin subunit sCache_like PF16736.5 gi|156937437|ref|YP_001435233.1| - 0.19 11.8 2.4 1.8 8.7 1.0 2.1 2 0 0 2 2 2 0 Single Cache-like RecG_N PF17190.4 gi|156937437|ref|YP_001435233.1| - 0.21 12.3 3.1 0.4 11.5 1.7 2.2 1 1 1 2 2 2 0 RecG N-terminal helical domain Prefoldin_2 PF01920.20 gi|156937437|ref|YP_001435233.1| - 0.22 11.5 3.9 1.4 8.9 0.5 2.4 2 0 0 2 2 2 0 Prefoldin subunit DUF4404 PF14357.6 gi|156937437|ref|YP_001435233.1| - 1.2 9.8 5.9 10 6.8 0.5 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) HMGL-like PF00682.19 gi|156937438|ref|YP_001435234.1| - 9.2e-53 179.5 0.0 1.3e-52 178.9 0.0 1.3 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|156937438|ref|YP_001435234.1| - 5.4e-26 91.1 0.0 1.1e-25 90.1 0.0 1.5 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain URO-D PF01208.17 gi|156937438|ref|YP_001435234.1| - 0.16 11.1 0.0 0.31 10.1 0.0 1.5 1 0 0 1 1 1 0 Uroporphyrinogen decarboxylase (URO-D) AAA_31 PF13614.6 gi|156937439|ref|YP_001435235.1| - 2.9e-09 37.1 0.0 4.3e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|156937439|ref|YP_001435235.1| - 6.2e-06 26.3 0.0 1.5e-05 25.0 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|156937439|ref|YP_001435235.1| - 7.8e-05 22.2 0.1 0.0002 20.9 0.0 1.6 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|156937439|ref|YP_001435235.1| - 0.0035 16.6 0.0 0.028 13.7 0.0 2.0 2 0 0 2 2 2 1 ATPase MipZ DUF4070 PF13282.6 gi|156937439|ref|YP_001435235.1| - 0.026 14.6 0.0 0.044 13.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4070) VirC1 PF07015.11 gi|156937439|ref|YP_001435235.1| - 0.026 13.8 0.0 0.045 13.0 0.0 1.3 1 0 0 1 1 1 0 VirC1 protein DnaB_C PF03796.15 gi|156937439|ref|YP_001435235.1| - 0.088 12.1 0.0 0.16 11.3 0.0 1.5 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain DUF4287 PF14117.6 gi|156937439|ref|YP_001435235.1| - 0.091 12.9 0.0 0.36 11.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4287) CBP_BcsQ PF06564.12 gi|156937439|ref|YP_001435235.1| - 0.14 11.6 0.0 0.77 9.2 0.0 2.0 1 1 0 1 1 1 0 Cellulose biosynthesis protein BcsQ TrkA_C PF02080.21 gi|156937440|ref|YP_001435236.1| - 1.4e-12 47.2 0.9 2.8e-08 33.5 2.1 2.3 2 0 0 2 2 2 2 TrkA-C domain PhoU PF01895.19 gi|156937440|ref|YP_001435236.1| - 2.5e-09 37.5 14.5 8.5e-05 22.9 3.5 2.8 3 0 0 3 3 3 2 PhoU domain CBS PF00571.28 gi|156937441|ref|YP_001435237.1| - 6e-35 119.5 2.1 2.4e-11 43.9 0.0 4.3 4 0 0 4 4 4 4 CBS domain Hydrolase_like PF13242.6 gi|156937442|ref|YP_001435238.1| - 3.9e-13 49.3 0.6 1.1e-12 47.8 0.1 2.0 2 0 0 2 2 2 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|156937442|ref|YP_001435238.1| - 1.2e-12 47.8 0.0 5.1e-12 45.8 0.0 2.0 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Oxidored_nitro PF00148.19 gi|156937442|ref|YP_001435238.1| - 0.0022 16.8 0.2 0.003 16.4 0.2 1.4 1 1 0 1 1 1 1 Nitrogenase component 1 type Oxidoreductase PGP_phosphatase PF09419.10 gi|156937442|ref|YP_001435238.1| - 0.0038 16.9 0.1 0.0063 16.2 0.1 1.3 1 0 0 1 1 1 1 Mitochondrial PGP phosphatase DUF3903 PF13043.6 gi|156937443|ref|YP_001435239.1| - 0.12 12.1 0.3 0.25 11.1 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3903) RNA_pol_Rpb2_6 PF00562.28 gi|156937444|ref|YP_001435240.1| - 3.7e-129 431.2 0.1 7.4e-129 430.2 0.0 1.5 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|156937444|ref|YP_001435240.1| - 3.6e-51 173.6 0.0 5.3e-51 173.0 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|156937444|ref|YP_001435240.1| - 6.5e-33 114.0 0.0 1.5e-32 112.8 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 gi|156937444|ref|YP_001435240.1| - 6.1e-28 97.0 0.0 1.3e-27 96.0 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 gi|156937444|ref|YP_001435240.1| - 9e-27 93.1 0.0 1.8e-26 92.1 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_4 PF04566.13 gi|156937444|ref|YP_001435240.1| - 2.5e-21 75.7 0.2 6.1e-21 74.5 0.2 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|156937444|ref|YP_001435240.1| - 3.4e-09 37.1 0.0 8.4e-09 35.9 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 RNA_pol_Rpa2_4 PF06883.12 gi|156937444|ref|YP_001435240.1| - 0.056 13.5 0.1 0.19 11.8 0.0 2.0 2 0 0 2 2 2 0 RNA polymerase I, Rpa2 specific domain zf-UBP PF02148.19 gi|156937444|ref|YP_001435240.1| - 0.11 12.8 0.8 0.22 11.9 0.8 1.4 1 0 0 1 1 1 0 Zn-finger in ubiquitin-hydrolases and other protein RNA_pol_Rpb5_C PF01191.19 gi|156937445|ref|YP_001435241.1| - 8.8e-25 86.4 0.1 9.7e-25 86.2 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain SH3_1 PF00018.28 gi|156937445|ref|YP_001435241.1| - 0.0033 17.0 0.0 0.005 16.4 0.0 1.3 1 0 0 1 1 1 1 SH3 domain MazE_antitoxin PF04014.18 gi|156937445|ref|YP_001435241.1| - 0.033 14.1 0.1 0.063 13.2 0.1 1.5 1 0 0 1 1 1 0 Antidote-toxin recognition MazE, bacterial antitoxin Maf_N PF08383.11 gi|156937445|ref|YP_001435241.1| - 0.17 11.7 0.1 0.34 10.7 0.1 1.5 1 0 0 1 1 1 0 Maf N-terminal region DUF58 PF01882.18 gi|156937446|ref|YP_001435242.1| - 5.8e-05 23.3 0.0 0.00016 21.9 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function DUF58 CBS PF00571.28 gi|156937448|ref|YP_001435244.1| - 1.3e-26 92.8 1.5 7.9e-15 55.0 0.2 2.1 2 0 0 2 2 2 2 CBS domain Epiglycanin_C PF14654.6 gi|156937449|ref|YP_001435245.1| - 0.15 12.1 1.0 0.14 12.2 1.0 1.1 1 0 0 1 1 1 0 Mucin, catalytic, TM and cytoplasmic tail region BNIP3 PF06553.12 gi|156937449|ref|YP_001435245.1| - 0.21 11.2 0.1 0.21 11.2 0.1 1.0 1 0 0 1 1 1 0 BNIP3 TP_methylase PF00590.20 gi|156937450|ref|YP_001435246.1| - 3.5e-24 85.9 0.0 4.7e-24 85.5 0.0 1.2 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases RHH_1 PF01402.21 gi|156937451|ref|YP_001435247.1| - 4.1e-13 48.8 1.0 4.1e-13 48.8 1.0 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family ParD_antitoxin PF03693.14 gi|156937451|ref|YP_001435247.1| - 0.0001 22.6 0.1 0.00012 22.4 0.1 1.1 1 0 0 1 1 1 1 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH RHH_8 PF17723.1 gi|156937451|ref|YP_001435247.1| - 0.00033 20.8 0.0 0.00035 20.7 0.0 1.1 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family VapB_antitoxin PF09957.9 gi|156937451|ref|YP_001435247.1| - 0.0027 17.6 1.7 0.0037 17.1 1.3 1.5 1 1 1 2 2 2 1 Bacterial antitoxin of type II TA system, VapB P5CR_dimer PF14748.6 gi|156937452|ref|YP_001435248.1| - 1.6e-18 66.8 0.0 3e-18 66.0 0.0 1.4 1 0 0 1 1 1 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|156937452|ref|YP_001435248.1| - 7.3e-10 39.3 0.0 1.9e-09 37.9 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent IlvN PF07991.12 gi|156937452|ref|YP_001435248.1| - 6.5e-09 35.6 0.0 1.1e-08 34.9 0.0 1.5 1 1 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain 2-Hacid_dh_C PF02826.19 gi|156937452|ref|YP_001435248.1| - 5.2e-05 22.7 0.0 8.8e-05 21.9 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|156937452|ref|YP_001435248.1| - 7.1e-05 23.0 0.0 0.00013 22.1 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|156937452|ref|YP_001435248.1| - 0.00026 21.1 0.1 0.00043 20.4 0.1 1.5 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|156937452|ref|YP_001435248.1| - 0.00038 20.5 1.2 0.94 9.4 0.1 2.9 3 0 0 3 3 3 2 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Rossmann-like PF10727.9 gi|156937452|ref|YP_001435248.1| - 0.0078 16.1 0.2 0.017 14.9 0.2 1.6 1 0 0 1 1 1 1 Rossmann-like domain PDH PF02153.17 gi|156937452|ref|YP_001435248.1| - 0.02 13.9 0.1 0.027 13.5 0.1 1.2 1 0 0 1 1 1 0 Prephenate dehydrogenase 3HCDH_N PF02737.18 gi|156937452|ref|YP_001435248.1| - 0.022 14.6 0.0 0.2 11.5 0.0 2.3 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Glyco_trans_4_4 PF13579.6 gi|156937452|ref|YP_001435248.1| - 0.025 15.0 0.6 0.094 13.2 0.6 2.1 1 1 0 1 1 1 0 Glycosyl transferase 4-like domain CoA_binding_2 PF13380.6 gi|156937452|ref|YP_001435248.1| - 0.044 14.3 0.3 0.092 13.2 0.2 1.8 1 1 0 1 1 1 0 CoA binding domain TrkA_N PF02254.18 gi|156937452|ref|YP_001435248.1| - 0.052 13.8 0.0 0.12 12.7 0.0 1.7 1 0 0 1 1 1 0 TrkA-N domain Glyco_trans_1_4 PF13692.6 gi|156937452|ref|YP_001435248.1| - 0.061 13.8 0.7 0.31 11.5 0.2 2.0 2 0 0 2 2 2 0 Glycosyl transferases group 1 Shikimate_DH PF01488.20 gi|156937452|ref|YP_001435248.1| - 0.15 12.1 0.2 0.4 10.7 0.1 1.8 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 gi|156937452|ref|YP_001435248.1| - 0.15 12.5 0.0 0.34 11.4 0.0 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding PIN_6 PF17146.4 gi|156937454|ref|YP_001435250.1| - 1.4e-12 47.9 0.0 2e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 PIN domain of ribonuclease PIN_5 PF08745.11 gi|156937454|ref|YP_001435250.1| - 0.00015 21.3 0.3 0.00025 20.5 0.2 1.4 1 1 0 1 1 1 1 PINc domain ribonuclease DZR PF12773.7 gi|156937454|ref|YP_001435250.1| - 0.0037 17.2 0.8 0.0083 16.1 0.7 1.6 2 0 0 2 2 2 1 Double zinc ribbon PIN_2 PF10130.9 gi|156937454|ref|YP_001435250.1| - 0.0067 16.7 0.0 0.0083 16.4 0.0 1.1 1 0 0 1 1 1 1 PIN domain zinc_ribbon_2 PF13240.6 gi|156937454|ref|YP_001435250.1| - 0.0098 15.6 1.2 0.02 14.6 1.2 1.6 1 0 0 1 1 1 1 zinc-ribbon domain DUF1272 PF06906.11 gi|156937454|ref|YP_001435250.1| - 0.019 15.1 2.8 0.052 13.7 1.7 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1272) zinc_ribbon_15 PF17032.5 gi|156937454|ref|YP_001435250.1| - 0.019 15.7 0.2 0.034 14.9 0.2 1.6 1 1 0 1 1 1 0 zinc-ribbon family DUF16 PF01519.16 gi|156937454|ref|YP_001435250.1| - 0.037 14.5 0.0 0.048 14.1 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 TackOD1 PF18551.1 gi|156937454|ref|YP_001435250.1| - 0.14 11.8 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Prok-RING_1 PF14446.6 gi|156937454|ref|YP_001435250.1| - 0.15 12.0 1.5 0.25 11.3 0.5 1.8 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 zf-ribbon_3 PF13248.6 gi|156937454|ref|YP_001435250.1| - 0.23 10.9 4.4 0.67 9.4 4.4 1.8 1 1 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|156937454|ref|YP_001435250.1| - 0.23 11.6 2.3 0.73 10.0 2.3 1.8 1 1 0 1 1 1 0 Zinc ribbon domain CYTH PF01928.21 gi|156937455|ref|YP_001435251.1| - 1.4e-05 25.1 0.1 1.9e-05 24.7 0.1 1.1 1 0 0 1 1 1 1 CYTH domain Peptidase_M20 PF01546.28 gi|156937457|ref|YP_001435253.1| - 1.8e-22 80.1 0.1 3.3e-22 79.2 0.0 1.4 2 0 0 2 2 2 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|156937457|ref|YP_001435253.1| - 1.1e-15 57.5 0.0 8.9e-15 54.6 0.0 2.2 3 0 0 3 3 3 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|156937457|ref|YP_001435253.1| - 0.00099 18.8 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 Cas_APE2256 PF09651.10 gi|156937458|ref|YP_001435254.1| - 1.2e-37 128.8 0.1 4.7e-37 126.9 0.0 1.8 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) HrpJ PF07201.11 gi|156937458|ref|YP_001435254.1| - 0.094 13.0 0.9 0.18 12.1 0.9 1.4 1 0 0 1 1 1 0 HrpJ-like domain CHIPS PF11434.8 gi|156937458|ref|YP_001435254.1| - 0.12 12.3 0.0 0.25 11.2 0.0 1.6 1 0 0 1 1 1 0 Chemotaxis-inhibiting protein CHIPS FlgN PF05130.12 gi|156937459|ref|YP_001435255.1| - 0.0038 17.8 1.0 0.004 17.7 1.0 1.2 1 0 0 1 1 1 1 FlgN protein Cluap1 PF10234.9 gi|156937459|ref|YP_001435255.1| - 0.0094 15.4 2.6 0.011 15.1 2.6 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 Bacillus_HBL PF05791.11 gi|156937459|ref|YP_001435255.1| - 0.015 15.1 1.7 0.024 14.5 1.4 1.4 1 1 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Cytochrom_C552 PF02335.15 gi|156937459|ref|YP_001435255.1| - 0.018 14.0 0.2 0.02 13.8 0.2 1.0 1 0 0 1 1 1 0 Cytochrome c552 GatB_Yqey PF02637.18 gi|156937459|ref|YP_001435255.1| - 0.022 14.6 2.8 0.054 13.4 2.4 1.8 1 1 1 2 2 2 0 GatB domain Apolipoprotein PF01442.18 gi|156937459|ref|YP_001435255.1| - 0.029 14.2 4.0 0.069 13.0 4.0 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Spc7 PF08317.11 gi|156937459|ref|YP_001435255.1| - 0.045 12.6 2.7 0.052 12.4 2.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein DUF4795 PF16043.5 gi|156937459|ref|YP_001435255.1| - 0.055 13.1 2.8 0.061 12.9 2.8 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) CENP-H PF05837.12 gi|156937459|ref|YP_001435255.1| - 0.079 13.4 2.5 0.18 12.3 2.5 1.6 1 1 0 1 1 1 0 Centromere protein H (CENP-H) FapA PF03961.13 gi|156937459|ref|YP_001435255.1| - 0.097 11.3 2.3 0.096 11.3 2.3 1.0 1 0 0 1 1 1 0 Flagellar Assembly Protein A DMPK_coil PF08826.10 gi|156937459|ref|YP_001435255.1| - 0.15 12.2 3.8 4.1 7.6 2.2 2.9 2 1 0 2 2 2 0 DMPK coiled coil domain like DUF2536 PF10750.9 gi|156937459|ref|YP_001435255.1| - 0.22 11.4 2.0 1.3 9.0 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2536) DUF3800 PF12686.7 gi|156937460|ref|YP_001435256.1| - 7.9e-06 26.5 0.0 1.7e-05 25.5 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF3800) Pox_Ag35 PF03286.14 gi|156937460|ref|YP_001435256.1| - 0.051 13.4 0.3 0.073 12.8 0.3 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein PP2C_C PF07830.13 gi|156937460|ref|YP_001435256.1| - 0.13 12.7 0.4 0.43 11.1 0.1 2.1 2 1 1 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain OppC_N PF12911.7 gi|156937462|ref|YP_001435258.1| - 0.064 13.2 0.6 0.064 13.2 0.6 3.3 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C Pilin_N PF07790.11 gi|156937463|ref|YP_001435259.1| - 0.14 13.1 5.2 0.4 11.6 5.2 2.0 1 1 0 1 1 1 0 Archaeal Type IV pilin, N-terminal MacB_PCD PF12704.7 gi|156937463|ref|YP_001435259.1| - 0.19 12.1 3.0 0.18 12.1 1.9 1.6 1 1 1 2 2 2 0 MacB-like periplasmic core domain Pyr_redox_2 PF07992.14 gi|156937464|ref|YP_001435260.1| - 8e-66 222.3 5.2 1.1e-65 221.8 5.2 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|156937464|ref|YP_001435260.1| - 1e-24 87.3 4.8 1.3e-23 83.8 0.2 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|156937464|ref|YP_001435260.1| - 3.6e-23 81.9 10.9 1.2e-18 67.5 2.2 3.5 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|156937464|ref|YP_001435260.1| - 4.5e-18 65.5 0.1 1.7e-17 63.7 0.0 2.0 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DAO PF01266.24 gi|156937464|ref|YP_001435260.1| - 6.9e-11 42.3 7.8 0.027 14.1 0.2 4.3 4 0 0 4 4 4 4 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|156937464|ref|YP_001435260.1| - 8.1e-11 41.3 3.7 0.012 14.3 0.2 4.1 4 0 0 4 4 4 4 HI0933-like protein NAD_binding_9 PF13454.6 gi|156937464|ref|YP_001435260.1| - 3.3e-09 36.9 6.3 0.068 13.1 0.4 4.2 3 1 0 4 4 4 4 FAD-NAD(P)-binding FAD_binding_2 PF00890.24 gi|156937464|ref|YP_001435260.1| - 6e-09 35.5 14.3 0.0052 15.9 0.3 5.6 4 1 2 6 6 6 3 FAD binding domain K_oxygenase PF13434.6 gi|156937464|ref|YP_001435260.1| - 2.4e-08 33.5 1.5 3.5e-07 29.7 0.1 2.8 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|156937464|ref|YP_001435260.1| - 3.2e-08 33.0 3.6 0.033 13.2 0.0 3.3 2 1 1 3 3 3 3 Lycopene cyclase protein GIDA PF01134.22 gi|156937464|ref|YP_001435260.1| - 8.2e-08 31.7 10.4 0.04 13.0 0.2 4.2 3 1 1 4 4 4 3 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|156937464|ref|YP_001435260.1| - 2.3e-06 27.7 4.1 0.0028 17.8 0.2 3.1 4 0 0 4 4 2 2 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|156937464|ref|YP_001435260.1| - 0.0017 17.7 2.9 0.13 11.5 0.0 3.1 2 1 1 3 3 3 1 Thi4 family TrkA_N PF02254.18 gi|156937464|ref|YP_001435260.1| - 0.0029 17.8 0.3 0.84 9.9 0.1 2.8 2 0 0 2 2 2 1 TrkA-N domain Amino_oxidase PF01593.24 gi|156937464|ref|YP_001435260.1| - 0.0031 16.9 1.3 0.14 11.4 0.1 2.8 3 0 0 3 3 3 1 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 gi|156937464|ref|YP_001435260.1| - 0.0092 15.3 0.7 1.4 8.1 0.1 2.4 2 0 0 2 2 2 1 FAD binding domain DUF1188 PF06690.11 gi|156937464|ref|YP_001435260.1| - 0.01 15.4 0.0 0.018 14.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) Trp_halogenase PF04820.14 gi|156937464|ref|YP_001435260.1| - 0.012 14.5 5.2 0.073 11.9 0.2 3.0 3 0 0 3 3 3 0 Tryptophan halogenase ApbA PF02558.16 gi|156937464|ref|YP_001435260.1| - 0.032 13.9 0.2 0.094 12.3 0.0 1.9 2 1 0 2 2 2 0 Ketopantoate reductase PanE/ApbA DUF5397 PF17375.2 gi|156937464|ref|YP_001435260.1| - 0.032 13.9 0.0 0.087 12.6 0.0 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5397) IlvN PF07991.12 gi|156937464|ref|YP_001435260.1| - 0.034 13.7 0.2 0.24 11.0 0.0 2.4 3 0 0 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 gi|156937464|ref|YP_001435260.1| - 0.041 13.2 0.6 0.041 13.2 0.6 2.8 3 1 0 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.20 gi|156937464|ref|YP_001435260.1| - 0.092 12.8 1.8 0.12 12.5 0.2 2.1 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DUF2380 PF09533.10 gi|156937464|ref|YP_001435260.1| - 0.21 11.2 0.0 0.38 10.4 0.0 1.3 1 0 0 1 1 1 0 Predicted lipoprotein of unknown function (DUF2380) FAD_oxidored PF12831.7 gi|156937464|ref|YP_001435260.1| - 1.2 8.4 11.2 0.57 9.5 0.5 3.3 3 1 1 4 4 4 0 FAD dependent oxidoreductase NAD_binding_7 PF13241.6 gi|156937464|ref|YP_001435260.1| - 3.6 8.1 7.2 4.3 7.8 0.5 2.6 2 1 0 2 2 2 0 Putative NAD(P)-binding Malic_M PF03949.15 gi|156937464|ref|YP_001435260.1| - 4.3 6.5 6.1 7 5.8 0.1 3.3 4 0 0 4 4 4 0 Malic enzyme, NAD binding domain DUF1641 PF07849.11 gi|156937465|ref|YP_001435261.1| - 3.5e-14 52.4 5.8 3.9e-14 52.2 2.4 2.6 2 1 1 3 3 3 1 Protein of unknown function (DUF1641) SSPI PF14098.6 gi|156937465|ref|YP_001435261.1| - 0.1 12.8 0.3 1.4 9.2 0.1 2.2 2 0 0 2 2 2 0 Small, acid-soluble spore protein I PilX_N PF14341.6 gi|156937465|ref|YP_001435261.1| - 0.12 12.3 0.2 0.23 11.4 0.2 1.5 1 0 0 1 1 1 0 PilX N-terminal Ldh_1_C PF02866.18 gi|156937465|ref|YP_001435261.1| - 0.15 12.0 0.5 0.32 10.9 0.2 1.4 1 1 1 2 2 2 0 lactate/malate dehydrogenase, alpha/beta C-terminal domain Pyr_redox_2 PF07992.14 gi|156937466|ref|YP_001435262.1| - 2.4e-14 53.3 0.0 3.4e-14 52.8 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|156937466|ref|YP_001435262.1| - 0.036 14.0 0.0 15 5.5 0.0 3.0 3 0 0 3 3 3 0 FAD-NAD(P)-binding Sua5_yciO_yrdC PF01300.18 gi|156937467|ref|YP_001435263.1| - 4.3e-39 133.9 0.0 6.4e-39 133.3 0.0 1.3 1 0 0 1 1 1 1 Telomere recombination zf-HYPF PF07503.12 gi|156937467|ref|YP_001435263.1| - 2.9e-27 94.1 12.2 1.5e-14 53.5 2.2 2.3 2 0 0 2 2 2 2 HypF finger HypF_C PF17788.1 gi|156937467|ref|YP_001435263.1| - 3.6e-27 95.0 0.1 6.5e-27 94.2 0.1 1.4 1 0 0 1 1 1 1 HypF Kae1-like domain Acylphosphatase PF00708.18 gi|156937467|ref|YP_001435263.1| - 1e-21 77.1 0.0 1.8e-21 76.3 0.0 1.4 1 0 0 1 1 1 1 Acylphosphatase Peptidase_M22 PF00814.25 gi|156937467|ref|YP_001435263.1| - 0.025 14.3 0.0 3.3 7.3 0.0 2.2 2 0 0 2 2 2 0 Glycoprotease family DUF1408 PF07193.11 gi|156937467|ref|YP_001435263.1| - 0.087 13.0 0.0 0.26 11.5 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1408) Carbam_trans_N PF02543.15 gi|156937467|ref|YP_001435263.1| - 0.13 11.9 0.0 0.2 11.3 0.0 1.2 1 0 0 1 1 1 0 Carbamoyltransferase N-terminus RIO1 PF01163.22 gi|156937468|ref|YP_001435264.1| - 1.7e-59 200.6 0.1 3e-59 199.8 0.1 1.4 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 gi|156937468|ref|YP_001435264.1| - 6.5e-07 28.9 0.1 1.6e-06 27.6 0.1 1.7 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 gi|156937468|ref|YP_001435264.1| - 9.7e-05 22.4 0.1 0.075 12.9 0.0 2.8 1 1 1 2 2 2 2 Phosphotransferase enzyme family Ribonuc_red_lgN PF00317.21 gi|156937468|ref|YP_001435264.1| - 0.0081 16.1 0.0 0.033 14.2 0.0 2.0 1 1 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain eIF-1a PF01176.19 gi|156937469|ref|YP_001435265.1| - 4.2e-18 64.9 0.5 5.9e-18 64.4 0.5 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Ribosomal_S6e PF01092.19 gi|156937470|ref|YP_001435266.1| - 2.5e-36 124.4 0.3 8.1e-36 122.8 0.0 1.9 2 0 0 2 2 2 1 Ribosomal protein S6e Fumerase PF05681.14 gi|156937471|ref|YP_001435267.1| - 4.7e-81 272.2 0.0 6.5e-81 271.7 0.0 1.2 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Fumerase_C PF05683.12 gi|156937471|ref|YP_001435267.1| - 1.9e-46 158.0 0.0 2.7e-46 157.5 0.0 1.2 1 0 0 1 1 1 1 Fumarase C-terminus ATP-synt_ab PF00006.25 gi|156937472|ref|YP_001435268.1| - 2.8e-68 229.8 0.0 3.7e-68 229.4 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|156937472|ref|YP_001435268.1| - 2.2e-12 47.3 3.0 2.2e-12 47.3 3.0 2.3 3 0 0 3 3 3 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|156937472|ref|YP_001435268.1| - 0.006 16.7 1.5 0.029 14.5 1.7 2.0 2 0 0 2 2 2 1 HAS barrel domain ATP-synt_D PF01813.17 gi|156937473|ref|YP_001435269.1| - 5e-43 147.2 9.4 5.7e-43 147.0 9.4 1.0 1 0 0 1 1 1 1 ATP synthase subunit D DUF2524 PF10732.9 gi|156937473|ref|YP_001435269.1| - 0.73 10.2 9.5 1.1 9.7 0.4 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2524) ATP-synt_C PF00137.21 gi|156937475|ref|YP_001435271.1| - 5.9e-11 42.6 13.6 5.9e-11 42.6 13.6 2.3 1 1 2 3 3 3 2 ATP synthase subunit C Yip1 PF04893.17 gi|156937475|ref|YP_001435271.1| - 0.0068 16.1 9.6 0.0072 16.1 9.6 1.0 1 0 0 1 1 1 1 Yip1 domain Aminotran_3 PF00202.21 gi|156937476|ref|YP_001435272.1| - 1e-73 248.4 0.0 1.2e-73 248.1 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|156937476|ref|YP_001435272.1| - 0.00033 19.9 0.0 0.00092 18.5 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Porphobil_deam PF01379.20 gi|156937477|ref|YP_001435273.1| - 8.4e-64 214.8 0.0 1.2e-63 214.3 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|156937477|ref|YP_001435273.1| - 6.5e-12 45.7 0.3 1.4e-11 44.6 0.3 1.5 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain ASCH PF04266.14 gi|156937478|ref|YP_001435274.1| - 2.8e-16 60.0 0.1 5.1e-16 59.2 0.1 1.4 1 0 0 1 1 1 1 ASCH domain EF-G-binding_N PF07299.11 gi|156937478|ref|YP_001435274.1| - 0.15 12.6 0.1 0.37 11.4 0.0 1.7 1 1 1 2 2 2 0 Elongation factor G-binding protein, N-terminal AdoMet_dc PF02675.15 gi|156937479|ref|YP_001435275.1| - 9.9e-35 119.0 0.0 1.2e-34 118.8 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase SpoVIF PF14069.6 gi|156937479|ref|YP_001435275.1| - 0.034 13.9 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 Stage VI sporulation protein F VitK2_biosynth PF02621.14 gi|156937480|ref|YP_001435276.1| - 6e-12 45.6 0.0 1e-11 44.9 0.0 1.3 1 1 0 1 1 1 1 Menaquinone biosynthesis DUF2911 PF11138.8 gi|156937481|ref|YP_001435277.1| - 0.055 13.3 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2911) LppX_LprAFG PF07161.13 gi|156937481|ref|YP_001435277.1| - 0.099 12.5 0.2 0.49 10.2 0.0 2.2 3 0 0 3 3 3 0 LppX_LprAFG lipoprotein Creatininase PF02633.14 gi|156937482|ref|YP_001435278.1| - 4.1e-55 186.9 0.0 5.1e-55 186.6 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase YcgL PF05166.13 gi|156937482|ref|YP_001435278.1| - 0.2 12.0 0.0 0.87 10.0 0.0 2.0 2 0 0 2 2 2 0 YcgL domain DNA_pol_B PF00136.21 gi|156937483|ref|YP_001435279.1| - 1.1e-53 182.6 3.9 2.7e-53 181.3 3.9 1.6 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|156937483|ref|YP_001435279.1| - 3.5e-35 121.7 1.1 7.9e-35 120.6 1.1 1.5 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|156937483|ref|YP_001435279.1| - 1.6e-05 25.0 0.6 6.2e-05 23.1 0.6 2.0 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_exo2 PF10108.9 gi|156937483|ref|YP_001435279.1| - 0.00042 20.1 0.0 0.00093 18.9 0.0 1.5 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNA_pol_Rpb5_C PF01191.19 gi|156937483|ref|YP_001435279.1| - 0.011 15.5 4.4 6.9 6.6 0.0 4.5 4 0 0 4 4 4 0 RNA polymerase Rpb5, C-terminal domain XPG_I PF00867.18 gi|156937484|ref|YP_001435280.1| - 2e-28 98.6 0.0 5.2e-28 97.2 0.0 1.7 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 gi|156937484|ref|YP_001435280.1| - 4.7e-21 75.1 0.0 9.2e-21 74.2 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|156937484|ref|YP_001435280.1| - 6.9e-07 29.8 2.4 2.3e-06 28.1 0.0 2.7 3 0 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 gi|156937484|ref|YP_001435280.1| - 0.0005 20.6 0.3 0.062 13.9 0.0 3.0 3 0 0 3 3 3 1 Helix-hairpin-helix domain EMC3_TMCO1 PF01956.16 gi|156937484|ref|YP_001435280.1| - 0.061 13.1 0.3 0.11 12.2 0.3 1.3 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like GIDA PF01134.22 gi|156937484|ref|YP_001435280.1| - 0.094 11.8 0.2 0.2 10.7 0.0 1.5 2 0 0 2 2 2 0 Glucose inhibited division protein A ApbA_C PF08546.11 gi|156937484|ref|YP_001435280.1| - 0.14 12.4 0.2 1.6 9.0 0.1 2.1 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA C terminal TPR_2 PF07719.17 gi|156937484|ref|YP_001435280.1| - 1.5 9.1 4.5 37 4.8 0.1 3.2 1 1 1 2 2 2 0 Tetratricopeptide repeat DUF1771 PF08590.10 gi|156937484|ref|YP_001435280.1| - 2.4 8.6 11.3 0.11 12.9 4.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1771) DUF4355 PF14265.6 gi|156937484|ref|YP_001435280.1| - 3.1 8.1 10.4 1.3 9.2 5.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4355) RNA_pol_Rpc34 PF05158.12 gi|156937485|ref|YP_001435281.1| - 0.025 13.9 0.1 0.026 13.9 0.1 1.1 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit FUR PF01475.19 gi|156937485|ref|YP_001435281.1| - 0.035 14.3 0.1 0.051 13.7 0.1 1.3 1 1 0 1 1 1 0 Ferric uptake regulator family AAA PF00004.29 gi|156937486|ref|YP_001435282.1| - 4e-98 325.0 0.0 5.6e-49 165.9 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|156937486|ref|YP_001435282.1| - 3e-38 129.4 0.1 6.9e-19 67.4 0.0 2.8 2 1 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|156937486|ref|YP_001435282.1| - 5.4e-32 109.8 3.4 1.2e-31 108.7 1.3 2.5 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.17 gi|156937486|ref|YP_001435282.1| - 2.3e-17 62.5 2.9 2.9e-17 62.2 0.7 2.4 2 1 1 3 3 2 1 Cell division protein 48 (CDC48), domain 2 AAA_2 PF07724.14 gi|156937486|ref|YP_001435282.1| - 6.2e-16 59.0 0.0 4.6e-08 33.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 gi|156937486|ref|YP_001435282.1| - 4.9e-15 55.6 0.0 6.2e-08 32.5 0.0 2.7 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|156937486|ref|YP_001435282.1| - 9.8e-14 52.1 0.0 7.2e-06 26.5 0.0 3.5 2 1 1 3 3 3 2 AAA ATPase domain AAA_5 PF07728.14 gi|156937486|ref|YP_001435282.1| - 1.2e-12 48.1 0.7 2.6e-05 24.3 0.1 3.7 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|156937486|ref|YP_001435282.1| - 4.8e-12 46.3 0.1 0.0006 20.1 0.0 3.9 2 2 1 3 3 3 2 AAA domain AAA_14 PF13173.6 gi|156937486|ref|YP_001435282.1| - 3.1e-11 43.4 0.0 2.4e-05 24.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|156937486|ref|YP_001435282.1| - 4.4e-11 42.6 0.0 0.00012 21.4 0.0 2.8 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 gi|156937486|ref|YP_001435282.1| - 5.8e-11 42.7 0.0 5.7e-05 23.3 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|156937486|ref|YP_001435282.1| - 1.7e-08 35.1 0.0 0.0045 17.5 0.0 3.4 4 0 0 4 4 2 2 AAA domain IstB_IS21 PF01695.17 gi|156937486|ref|YP_001435282.1| - 1.8e-08 34.3 0.2 0.0054 16.5 0.0 2.9 3 0 0 3 3 2 2 IstB-like ATP binding protein Vps4_C PF09336.10 gi|156937486|ref|YP_001435282.1| - 3.5e-08 33.3 0.1 9.2e-05 22.4 0.0 3.0 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain Mg_chelatase PF01078.21 gi|156937486|ref|YP_001435282.1| - 1.1e-07 31.5 0.4 0.0044 16.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|156937486|ref|YP_001435282.1| - 1.3e-07 32.0 0.0 0.00085 19.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|156937486|ref|YP_001435282.1| - 4.2e-07 30.3 0.0 0.0075 16.6 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 gi|156937486|ref|YP_001435282.1| - 1.7e-06 27.9 0.0 0.026 14.2 0.0 2.6 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|156937486|ref|YP_001435282.1| - 2.2e-06 28.2 0.0 0.06 13.9 0.0 2.4 2 0 0 2 2 2 2 ABC transporter AAA_7 PF12775.7 gi|156937486|ref|YP_001435282.1| - 3.8e-06 26.6 0.0 0.019 14.5 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region Sigma54_activat PF00158.26 gi|156937486|ref|YP_001435282.1| - 6e-06 26.1 0.1 0.18 11.5 0.0 3.6 2 2 0 2 2 2 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|156937486|ref|YP_001435282.1| - 1.3e-05 24.5 0.1 0.2 10.9 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin TsaE PF02367.17 gi|156937486|ref|YP_001435282.1| - 1.4e-05 25.1 0.0 0.094 12.7 0.0 3.0 3 0 0 3 3 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE PhoH PF02562.16 gi|156937486|ref|YP_001435282.1| - 2.2e-05 24.0 0.2 0.17 11.3 0.1 2.7 2 0 0 2 2 2 2 PhoH-like protein AAA_3 PF07726.11 gi|156937486|ref|YP_001435282.1| - 5e-05 23.2 0.0 0.053 13.4 0.0 2.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 gi|156937486|ref|YP_001435282.1| - 5.2e-05 22.5 0.0 0.2 10.8 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|156937486|ref|YP_001435282.1| - 0.00015 21.4 8.1 0.33 10.5 0.1 4.3 2 2 1 4 4 4 2 AAA domain Bac_DnaA PF00308.18 gi|156937486|ref|YP_001435282.1| - 0.00019 21.4 0.0 0.056 13.3 0.0 3.1 2 2 0 2 2 2 1 Bacterial dnaA protein ATPase PF06745.13 gi|156937486|ref|YP_001435282.1| - 0.00022 20.7 3.6 0.97 8.7 0.1 4.1 3 1 0 4 4 4 2 KaiC ATPase_2 PF01637.18 gi|156937486|ref|YP_001435282.1| - 0.00024 21.1 0.1 0.29 11.0 0.0 3.4 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|156937486|ref|YP_001435282.1| - 0.00024 21.0 0.3 0.17 11.8 0.0 3.3 4 0 0 4 4 3 1 NACHT domain Parvo_NS1 PF01057.17 gi|156937486|ref|YP_001435282.1| - 0.00041 19.5 0.1 0.13 11.3 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AAA_30 PF13604.6 gi|156937486|ref|YP_001435282.1| - 0.0005 19.8 0.1 0.93 9.2 0.0 2.8 3 0 0 3 3 2 2 AAA domain AAA_19 PF13245.6 gi|156937486|ref|YP_001435282.1| - 0.00071 19.9 0.8 1.9 8.8 0.0 2.9 2 1 0 3 3 2 1 AAA domain DUF2075 PF09848.9 gi|156937486|ref|YP_001435282.1| - 0.001 18.4 0.0 0.45 9.7 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 gi|156937486|ref|YP_001435282.1| - 0.002 18.0 0.0 1.7 8.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain AFG1_ATPase PF03969.16 gi|156937486|ref|YP_001435282.1| - 0.0031 16.5 0.0 0.94 8.3 0.0 2.6 3 0 0 3 3 3 1 AFG1-like ATPase NTPase_1 PF03266.15 gi|156937486|ref|YP_001435282.1| - 0.0043 17.0 1.5 3.8 7.4 0.0 3.8 3 2 1 4 4 3 0 NTPase Sigma54_activ_2 PF14532.6 gi|156937486|ref|YP_001435282.1| - 0.0053 16.9 0.0 0.78 9.9 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain NB-ARC PF00931.22 gi|156937486|ref|YP_001435282.1| - 0.0055 15.9 0.0 5.2 6.2 0.0 3.0 3 0 0 3 3 3 0 NB-ARC domain UFD1 PF03152.14 gi|156937486|ref|YP_001435282.1| - 0.0059 16.1 0.1 0.15 11.5 0.0 2.6 1 1 1 2 2 2 1 Ubiquitin fusion degradation protein UFD1 Guanylate_kin PF00625.21 gi|156937486|ref|YP_001435282.1| - 0.0079 15.9 0.5 8.4 6.0 0.0 3.9 2 2 2 4 4 4 0 Guanylate kinase AAA_17 PF13207.6 gi|156937486|ref|YP_001435282.1| - 0.0087 16.5 0.0 2.7 8.4 0.0 2.9 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|156937486|ref|YP_001435282.1| - 0.013 14.6 0.0 2.3 7.2 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein Viral_helicase1 PF01443.18 gi|156937486|ref|YP_001435282.1| - 0.015 15.0 0.0 1.5 8.5 0.0 2.5 3 0 0 3 3 2 0 Viral (Superfamily 1) RNA helicase TniB PF05621.11 gi|156937486|ref|YP_001435282.1| - 0.021 14.3 0.0 5 6.5 0.0 3.2 4 0 0 4 4 3 0 Bacterial TniB protein PduV-EutP PF10662.9 gi|156937486|ref|YP_001435282.1| - 0.03 14.1 0.0 2.7 7.7 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ResIII PF04851.15 gi|156937486|ref|YP_001435282.1| - 0.033 14.2 0.0 13 5.8 0.0 2.6 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Cytidylate_kin PF02224.18 gi|156937486|ref|YP_001435282.1| - 0.049 13.4 0.0 2.7 7.7 0.0 2.5 2 0 0 2 2 2 0 Cytidylate kinase AAA_29 PF13555.6 gi|156937486|ref|YP_001435282.1| - 0.084 12.6 0.0 14 5.5 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Rad17 PF03215.15 gi|156937486|ref|YP_001435282.1| - 0.084 12.8 0.0 11 5.9 0.0 2.9 2 1 1 3 3 3 0 Rad17 P-loop domain KTI12 PF08433.10 gi|156937486|ref|YP_001435282.1| - 0.088 12.2 0.0 2 7.8 0.0 2.4 2 0 0 2 2 2 0 Chromatin associated protein KTI12 SRP54 PF00448.22 gi|156937486|ref|YP_001435282.1| - 0.094 12.3 0.3 32 4.1 0.0 3.3 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain SKI PF01202.22 gi|156937486|ref|YP_001435282.1| - 0.16 12.0 0.0 5.9 7.0 0.0 2.5 2 0 0 2 2 2 0 Shikimate kinase DUF126 PF01989.16 gi|156937487|ref|YP_001435283.1| - 2.2e-24 85.1 0.1 4e-24 84.2 0.1 1.5 1 0 0 1 1 1 1 Aconitase X swivel domain DUF521 PF04412.13 gi|156937488|ref|YP_001435284.1| - 3.3e-126 421.3 0.0 3.6e-126 421.1 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF521) CbiK PF06180.11 gi|156937488|ref|YP_001435284.1| - 0.021 14.1 0.0 0.032 13.5 0.0 1.2 1 0 0 1 1 1 0 Cobalt chelatase (CbiK) Glu_cys_ligase PF04262.14 gi|156937488|ref|YP_001435284.1| - 0.23 10.0 0.0 0.34 9.5 0.0 1.2 1 0 0 1 1 1 0 Glutamate-cysteine ligase TIM PF00121.18 gi|156937489|ref|YP_001435285.1| - 7e-12 45.2 0.0 1e-09 38.2 0.0 2.1 2 0 0 2 2 2 2 Triosephosphate isomerase ThiG PF05690.14 gi|156937489|ref|YP_001435285.1| - 6e-09 35.6 1.0 7.5e-09 35.2 0.5 1.4 1 1 0 1 1 1 1 Thiazole biosynthesis protein ThiG Trp_syntA PF00290.20 gi|156937489|ref|YP_001435285.1| - 6.3e-07 28.5 2.3 1.4e-06 27.4 0.5 2.1 2 0 0 2 2 2 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|156937489|ref|YP_001435285.1| - 1.8e-05 24.3 0.2 4.7e-05 23.0 0.1 1.7 2 0 0 2 2 2 1 Histidine biosynthesis protein FMN_dh PF01070.18 gi|156937489|ref|YP_001435285.1| - 2e-05 23.8 2.1 3.2e-05 23.1 2.1 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase PcrB PF01884.17 gi|156937489|ref|YP_001435285.1| - 0.0016 17.9 1.4 0.0058 16.1 0.3 2.0 1 1 1 2 2 2 1 PcrB family NMO PF03060.15 gi|156937489|ref|YP_001435285.1| - 0.024 14.1 0.4 0.032 13.6 0.4 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase NanE PF04131.14 gi|156937489|ref|YP_001435285.1| - 0.059 12.6 0.2 0.075 12.2 0.2 1.4 1 1 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase SBDS PF01172.18 gi|156937490|ref|YP_001435286.1| - 1e-25 89.6 0.1 2.1e-25 88.6 0.1 1.5 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|156937490|ref|YP_001435286.1| - 3.5e-21 75.4 0.9 6.5e-21 74.5 0.9 1.4 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|156937490|ref|YP_001435286.1| - 0.00011 22.1 0.0 0.0003 20.8 0.0 1.7 2 0 0 2 2 2 1 Elongation factor G C-terminus Radical_SAM PF04055.21 gi|156937491|ref|YP_001435287.1| - 6.1e-29 101.5 0.1 6.1e-29 101.5 0.1 1.6 2 0 0 2 2 2 1 Radical SAM superfamily Mob_synth_C PF06463.13 gi|156937491|ref|YP_001435287.1| - 2e-20 73.0 0.0 3.4e-20 72.3 0.0 1.3 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Fer4_12 PF13353.6 gi|156937491|ref|YP_001435287.1| - 1.6e-08 34.9 0.0 2.9e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|156937491|ref|YP_001435287.1| - 6.3e-06 26.3 0.0 1.4e-05 25.2 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SpoIIM PF01944.17 gi|156937492|ref|YP_001435288.1| - 0.0079 16.2 2.4 0.026 14.6 2.4 2.0 1 1 0 1 1 1 1 Stage II sporulation protein M 7TM-7TMR_HD PF07698.11 gi|156937492|ref|YP_001435288.1| - 0.025 14.3 4.9 0.031 14.1 4.9 1.1 1 0 0 1 1 1 0 7TM receptor with intracellular HD hydrolase V4R PF02830.18 gi|156937494|ref|YP_001435290.1| - 1.2e-07 31.6 0.1 2e-07 30.9 0.1 1.3 1 0 0 1 1 1 1 V4R domain HAMP_N3 PF18575.1 gi|156937494|ref|YP_001435290.1| - 0.088 12.4 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 HAMP N-terminal domain 3 Fe_dep_repress PF01325.19 gi|156937495|ref|YP_001435291.1| - 2.7e-15 56.3 0.6 6.1e-15 55.2 0.1 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Fe_dep_repr_C PF02742.15 gi|156937495|ref|YP_001435291.1| - 1.1e-13 51.1 2.9 1.7e-13 50.4 2.9 1.4 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_IclR PF09339.10 gi|156937495|ref|YP_001435291.1| - 6.6e-06 25.8 0.0 1.1e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|156937495|ref|YP_001435291.1| - 7e-06 25.8 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|156937495|ref|YP_001435291.1| - 1.3e-05 24.7 0.0 2.2e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|156937495|ref|YP_001435291.1| - 9.5e-05 22.2 0.0 0.00023 21.0 0.0 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family AAA_assoc_C PF09821.9 gi|156937495|ref|YP_001435291.1| - 0.00045 20.7 0.2 0.0009 19.8 0.1 1.6 1 1 1 2 2 2 1 C-terminal AAA-associated domain HTH_45 PF14947.6 gi|156937495|ref|YP_001435291.1| - 0.0017 18.3 0.4 0.0031 17.4 0.4 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_40 PF14493.6 gi|156937495|ref|YP_001435291.1| - 0.0024 18.3 0.1 0.0076 16.7 0.1 1.8 1 1 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|156937495|ref|YP_001435291.1| - 0.0035 17.7 0.0 0.0059 16.9 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator TnsD PF15978.5 gi|156937495|ref|YP_001435291.1| - 0.0058 15.7 0.0 0.014 14.4 0.0 1.5 1 1 0 1 1 1 1 Tn7-like transposition protein D HTH_Crp_2 PF13545.6 gi|156937495|ref|YP_001435291.1| - 0.0066 16.4 0.0 0.011 15.7 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_28 PF13518.6 gi|156937495|ref|YP_001435291.1| - 0.007 16.5 0.0 0.014 15.5 0.0 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|156937495|ref|YP_001435291.1| - 0.0074 16.1 0.6 0.034 14.0 0.1 2.1 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF2250 PF10007.9 gi|156937495|ref|YP_001435291.1| - 0.011 15.8 0.2 0.028 14.5 0.1 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_29 PF13551.6 gi|156937495|ref|YP_001435291.1| - 0.013 15.5 0.0 0.022 14.8 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_10 PF04967.12 gi|156937495|ref|YP_001435291.1| - 0.014 15.2 0.0 0.037 13.8 0.0 1.7 2 0 0 2 2 1 0 HTH DNA binding domain HTH_1 PF00126.27 gi|156937495|ref|YP_001435291.1| - 0.023 14.6 0.0 0.13 12.2 0.0 2.2 1 1 0 1 1 1 0 Bacterial regulatory helix-turn-helix protein, lysR family HTH_23 PF13384.6 gi|156937495|ref|YP_001435291.1| - 0.023 14.5 0.0 0.057 13.2 0.0 1.7 2 0 0 2 2 2 0 Homeodomain-like domain HTH_27 PF13463.6 gi|156937495|ref|YP_001435291.1| - 0.03 14.8 0.3 0.087 13.3 0.0 1.9 2 1 0 2 2 2 0 Winged helix DNA-binding domain MarR PF01047.22 gi|156937495|ref|YP_001435291.1| - 0.033 14.1 0.0 0.064 13.2 0.0 1.5 1 0 0 1 1 1 0 MarR family Terminase_5 PF06056.12 gi|156937495|ref|YP_001435291.1| - 0.048 13.5 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_30 PF13556.6 gi|156937495|ref|YP_001435291.1| - 0.088 12.6 0.0 0.2 11.5 0.0 1.6 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HTH_20 PF12840.7 gi|156937495|ref|YP_001435291.1| - 0.091 12.8 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain ScdA_N PF04405.14 gi|156937495|ref|YP_001435291.1| - 0.093 12.4 0.0 0.24 11.1 0.0 1.7 1 0 0 1 1 1 0 Domain of Unknown function (DUF542) HTH_36 PF13730.6 gi|156937495|ref|YP_001435291.1| - 0.099 12.6 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain IF2_N PF04760.15 gi|156937495|ref|YP_001435291.1| - 0.11 12.3 0.8 0.87 9.5 0.0 2.7 3 1 1 4 4 4 0 Translation initiation factor IF-2, N-terminal region HTH_Tnp_1 PF01527.20 gi|156937495|ref|YP_001435291.1| - 0.12 12.7 0.3 0.27 11.6 0.0 1.7 2 0 0 2 2 2 0 Transposase Thiamine_BP PF01910.17 gi|156937496|ref|YP_001435292.1| - 1.2e-23 82.8 0.4 1.3e-23 82.7 0.4 1.0 1 0 0 1 1 1 1 Thiamine-binding protein DUF294_C PF10335.9 gi|156937496|ref|YP_001435292.1| - 0.087 12.6 0.0 0.11 12.3 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase substrate binding domain Pribosyltran PF00156.27 gi|156937497|ref|YP_001435293.1| - 2.9e-17 62.7 0.0 3.9e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|156937497|ref|YP_001435293.1| - 5.8e-05 22.6 0.0 0.00011 21.7 0.0 1.4 1 1 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|156937497|ref|YP_001435293.1| - 0.076 12.5 0.0 0.12 11.9 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Pyr_redox_2 PF07992.14 gi|156937498|ref|YP_001435294.1| - 7.6e-10 38.5 0.0 1.2e-09 37.8 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|156937498|ref|YP_001435294.1| - 4e-09 36.6 0.0 9.3e-09 35.4 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|156937498|ref|YP_001435294.1| - 1.6e-08 34.3 0.0 2e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|156937498|ref|YP_001435294.1| - 2.1e-07 30.0 0.1 2.2e-06 26.6 0.0 2.4 2 1 1 3 3 3 1 HI0933-like protein Lycopene_cycl PF05834.12 gi|156937498|ref|YP_001435294.1| - 1.6e-06 27.4 0.0 0.0099 15.0 0.0 2.7 3 0 0 3 3 3 2 Lycopene cyclase protein Thi4 PF01946.17 gi|156937498|ref|YP_001435294.1| - 2.2e-06 27.1 0.0 4.4e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|156937498|ref|YP_001435294.1| - 7.6e-06 25.7 0.0 7.4e-05 22.5 0.1 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|156937498|ref|YP_001435294.1| - 2.6e-05 23.5 0.2 7e-05 22.1 0.2 1.8 1 1 0 1 1 1 1 Glucose inhibited division protein A FAD_binding_3 PF01494.19 gi|156937498|ref|YP_001435294.1| - 5.6e-05 22.5 0.0 0.00022 20.6 0.0 1.8 2 0 0 2 2 2 1 FAD binding domain FAD_binding_2 PF00890.24 gi|156937498|ref|YP_001435294.1| - 7.8e-05 21.9 0.0 0.00012 21.4 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|156937498|ref|YP_001435294.1| - 0.0013 19.3 0.0 0.0047 17.4 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|156937498|ref|YP_001435294.1| - 0.0022 17.3 0.3 0.034 13.4 0.0 2.1 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Phage_Gp17 PF17549.2 gi|156937498|ref|YP_001435294.1| - 0.013 15.5 0.0 0.086 12.9 0.0 2.0 2 0 0 2 2 2 0 Gene Product 17 Amino_oxidase PF01593.24 gi|156937498|ref|YP_001435294.1| - 0.049 12.9 0.0 0.075 12.3 0.0 1.2 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Trp_halogenase PF04820.14 gi|156937498|ref|YP_001435294.1| - 0.079 11.8 0.0 0.75 8.6 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase HTH_AsnC-type PF13404.6 gi|156937499|ref|YP_001435295.1| - 3.2e-15 55.7 0.5 3.2e-15 55.7 0.5 1.7 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|156937499|ref|YP_001435295.1| - 8.2e-15 54.5 0.5 1.4e-14 53.8 0.5 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|156937499|ref|YP_001435295.1| - 6.9e-14 51.1 0.6 1.2e-13 50.3 0.6 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|156937499|ref|YP_001435295.1| - 3.6e-07 30.0 2.0 5.2e-07 29.5 0.2 2.1 3 0 0 3 3 3 1 HTH domain HTH_20 PF12840.7 gi|156937499|ref|YP_001435295.1| - 0.00017 21.6 0.2 0.0056 16.7 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|156937499|ref|YP_001435295.1| - 0.00061 19.5 0.9 0.0033 17.1 0.1 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|156937499|ref|YP_001435295.1| - 0.0018 18.7 0.7 0.014 15.9 0.1 2.4 2 1 1 3 3 3 1 Winged helix DNA-binding domain zf-H3C2 PF16721.5 gi|156937499|ref|YP_001435295.1| - 0.0022 18.3 0.1 0.21 12.0 0.0 2.2 2 0 0 2 2 2 1 Zinc-finger like, probable DNA-binding HTH_5 PF01022.20 gi|156937499|ref|YP_001435295.1| - 0.008 16.0 0.1 0.021 14.7 0.1 1.7 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family DUF4777 PF16007.5 gi|156937499|ref|YP_001435295.1| - 0.027 14.7 0.8 0.24 11.7 0.0 2.7 4 0 0 4 4 4 0 Domain of unknown function (DUF4777) HTH_DeoR PF08220.12 gi|156937499|ref|YP_001435295.1| - 0.027 14.2 0.3 0.23 11.2 0.1 2.2 2 1 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_6 PF01418.17 gi|156937499|ref|YP_001435295.1| - 0.04 13.9 0.0 0.07 13.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family Caleosin PF05042.13 gi|156937499|ref|YP_001435295.1| - 0.052 13.5 0.0 0.08 12.9 0.0 1.3 1 0 0 1 1 1 0 Caleosin related protein HTH_23 PF13384.6 gi|156937499|ref|YP_001435295.1| - 0.056 13.3 0.0 0.15 11.9 0.0 1.7 1 0 0 1 1 1 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|156937499|ref|YP_001435295.1| - 0.068 12.7 0.2 0.16 11.5 0.2 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HrcA_DNA-bdg PF03444.15 gi|156937499|ref|YP_001435295.1| - 0.11 12.2 1.4 0.33 10.6 0.1 2.2 3 0 0 3 3 3 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AsnC_trans_reg2 PF17805.1 gi|156937499|ref|YP_001435295.1| - 0.13 12.4 0.1 0.27 11.4 0.0 1.5 2 0 0 2 2 2 0 AsnC-like ligand binding domain ATP_bind_3 PF01171.20 gi|156937500|ref|YP_001435296.1| - 1.4e-13 51.0 0.0 2.2e-13 50.4 0.0 1.2 1 0 0 1 1 1 1 PP-loop family QueC PF06508.13 gi|156937500|ref|YP_001435296.1| - 1.2e-06 28.2 0.0 6.4e-06 25.8 0.0 2.1 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|156937500|ref|YP_001435296.1| - 1.3e-06 27.5 0.0 1.8e-06 27.0 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|156937500|ref|YP_001435296.1| - 3.5e-06 26.3 0.0 4.6e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|156937500|ref|YP_001435296.1| - 1.5e-05 24.8 0.0 2.2e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase PAPS_reduct PF01507.19 gi|156937500|ref|YP_001435296.1| - 0.0019 18.2 0.0 0.0083 16.2 0.0 1.9 1 1 1 2 2 2 1 Phosphoadenosine phosphosulfate reductase family ThiI PF02568.14 gi|156937500|ref|YP_001435296.1| - 0.011 15.3 0.0 0.02 14.5 0.0 1.4 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) Arginosuc_synth PF00764.19 gi|156937500|ref|YP_001435296.1| - 0.019 14.3 0.0 0.027 13.8 0.0 1.1 1 0 0 1 1 1 0 Arginosuccinate synthase HTH_22 PF13309.6 gi|156937500|ref|YP_001435296.1| - 0.068 13.3 0.1 0.4 10.8 0.1 2.2 2 0 0 2 2 2 0 HTH domain YyzF PF14116.6 gi|156937500|ref|YP_001435296.1| - 0.41 10.7 3.3 27 4.9 0.0 3.5 4 0 0 4 4 4 0 YyzF-like protein Med27 PF11571.8 gi|156937500|ref|YP_001435296.1| - 0.72 10.3 2.0 0.98 9.8 0.1 2.2 2 0 0 2 2 2 0 Mediator complex subunit 27 RecR PF02132.15 gi|156937500|ref|YP_001435296.1| - 4.1 7.0 10.7 1.6 8.4 0.3 2.8 3 0 0 3 3 3 0 RecR protein Radical_SAM PF04055.21 gi|156937501|ref|YP_001435297.1| - 4.4e-11 43.4 0.0 1.2e-10 42.1 0.0 1.8 2 0 0 2 2 2 1 Radical SAM superfamily TrmB PF01978.19 gi|156937503|ref|YP_001435299.1| - 1.7e-07 31.0 0.1 2.5e-07 30.5 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|156937503|ref|YP_001435299.1| - 4.9e-07 29.5 0.0 9.2e-07 28.7 0.0 1.4 1 0 0 1 1 1 1 MarR family DUF4423 PF14394.6 gi|156937503|ref|YP_001435299.1| - 8.3e-07 28.9 0.1 1.1e-06 28.4 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_27 PF13463.6 gi|156937503|ref|YP_001435299.1| - 2.3e-06 28.0 0.0 4.2e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|156937503|ref|YP_001435299.1| - 2.2e-05 24.4 0.0 4.5e-05 23.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|156937503|ref|YP_001435299.1| - 5.1e-05 23.4 0.2 0.0001 22.4 0.0 1.6 2 0 0 2 2 1 1 Iron dependent repressor, N-terminal DNA binding domain GntR PF00392.21 gi|156937503|ref|YP_001435299.1| - 0.00019 21.0 0.1 0.00054 19.6 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|156937503|ref|YP_001435299.1| - 0.0011 18.9 0.0 0.0017 18.3 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|156937503|ref|YP_001435299.1| - 0.0012 18.8 0.4 0.0048 16.9 0.1 2.1 2 1 1 3 3 3 1 Crp-like helix-turn-helix domain DUF2250 PF10007.9 gi|156937503|ref|YP_001435299.1| - 0.0017 18.4 0.5 0.0031 17.6 0.5 1.4 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) GPP34 PF05719.11 gi|156937503|ref|YP_001435299.1| - 0.0028 17.7 0.6 0.0039 17.2 0.4 1.3 1 1 0 1 1 1 1 Golgi phosphoprotein 3 (GPP34) DUF2508 PF10704.9 gi|156937503|ref|YP_001435299.1| - 0.0035 17.5 0.2 0.0069 16.5 0.2 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2508) HTH_29 PF13551.6 gi|156937503|ref|YP_001435299.1| - 0.0055 16.7 0.0 0.03 14.4 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn helix HTH_24 PF13412.6 gi|156937503|ref|YP_001435299.1| - 0.0063 16.1 0.1 0.014 14.9 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_36 PF13730.6 gi|156937503|ref|YP_001435299.1| - 0.0067 16.4 0.0 0.017 15.1 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|156937503|ref|YP_001435299.1| - 0.008 16.0 0.6 0.013 15.4 0.4 1.4 1 1 0 1 1 1 1 TFIIE alpha subunit Phage_rep_org_N PF09681.10 gi|156937503|ref|YP_001435299.1| - 0.0086 16.0 0.1 0.011 15.7 0.1 1.2 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_45 PF14947.6 gi|156937503|ref|YP_001435299.1| - 0.058 13.4 0.1 0.11 12.5 0.1 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix Skp1 PF01466.19 gi|156937503|ref|YP_001435299.1| - 0.062 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Skp1 family, dimerisation domain HU-CCDC81_euk_2 PF18289.1 gi|156937503|ref|YP_001435299.1| - 0.076 13.2 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 HTH_IclR PF09339.10 gi|156937503|ref|YP_001435299.1| - 0.087 12.6 0.0 0.19 11.6 0.0 1.6 1 0 0 1 1 1 0 IclR helix-turn-helix domain EAP30 PF04157.16 gi|156937503|ref|YP_001435299.1| - 0.11 11.8 0.3 0.63 9.3 0.0 1.9 2 0 0 2 2 2 0 EAP30/Vps36 family Rrf2 PF02082.20 gi|156937503|ref|YP_001435299.1| - 0.14 12.5 0.0 0.26 11.6 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator Phage_rep_O PF04492.13 gi|156937503|ref|YP_001435299.1| - 0.19 12.3 0.1 0.4 11.3 0.1 1.5 1 1 1 2 2 2 0 Bacteriophage replication protein O GreA_GreB_N PF03449.15 gi|156937503|ref|YP_001435299.1| - 0.54 10.4 3.8 1.7 8.9 0.5 2.1 2 0 0 2 2 2 0 Transcription elongation factor, N-terminal DUF4199 PF13858.6 gi|156937504|ref|YP_001435300.1| - 0.11 13.0 0.1 0.16 12.3 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) DUF5409 PF17421.2 gi|156937504|ref|YP_001435300.1| - 0.23 12.2 2.5 0.41 11.4 0.6 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5409) ALG3 PF05208.13 gi|156937505|ref|YP_001435301.1| - 0.0011 18.4 2.7 0.0011 18.4 2.7 2.0 2 1 0 2 2 2 1 ALG3 protein PCNA_N PF00705.18 gi|156937506|ref|YP_001435302.1| - 1.4e-11 44.2 0.2 7e-11 41.9 0.0 2.1 2 1 1 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain Hus1 PF04005.12 gi|156937506|ref|YP_001435302.1| - 7.7e-06 25.2 0.3 9.4e-06 24.9 0.3 1.2 1 0 0 1 1 1 1 Hus1-like protein PCNA_C PF02747.15 gi|156937506|ref|YP_001435302.1| - 8.3e-06 26.0 2.2 0.0063 16.7 0.3 3.6 2 2 1 3 3 3 2 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 gi|156937506|ref|YP_001435302.1| - 0.00071 19.1 0.9 0.001 18.6 0.9 1.3 1 0 0 1 1 1 1 Rad9 NTF-like PF14540.6 gi|156937506|ref|YP_001435302.1| - 0.033 14.0 0.2 1 9.1 0.1 2.3 2 0 0 2 2 2 0 Nucleotidyltransferase-like Hen1_L PF12623.7 gi|156937507|ref|YP_001435303.1| - 0.023 13.8 0.1 0.2 10.7 0.0 1.9 2 0 0 2 2 2 0 RNA repair, ligase-Pnkp-associating, region of Hen1 HTH_37 PF13744.6 gi|156937507|ref|YP_001435303.1| - 0.029 14.3 0.0 0.064 13.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain PX PF00787.24 gi|156937507|ref|YP_001435303.1| - 0.065 13.2 0.0 0.082 12.9 0.0 1.3 1 0 0 1 1 1 0 PX domain DUF677 PF05055.12 gi|156937507|ref|YP_001435303.1| - 0.1 11.5 2.9 1.7 7.4 0.3 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF677) AAA_10 PF12846.7 gi|156937508|ref|YP_001435304.1| - 2.9e-10 39.6 0.2 1.1e-05 24.6 0.0 2.4 1 1 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 gi|156937508|ref|YP_001435304.1| - 2.2e-08 34.5 2.7 4.8e-08 33.4 0.1 2.7 2 2 0 2 2 2 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 gi|156937508|ref|YP_001435304.1| - 7.3e-07 28.4 0.7 0.002 17.1 0.0 2.3 1 1 1 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain DUF853 PF05872.12 gi|156937508|ref|YP_001435304.1| - 9.5e-07 27.8 0.0 0.0021 16.7 0.0 2.4 3 0 0 3 3 3 2 Bacterial protein of unknown function (DUF853) FtsK_SpoIIIE PF01580.18 gi|156937508|ref|YP_001435304.1| - 4.6e-05 22.9 0.0 0.00013 21.4 0.0 1.7 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|156937508|ref|YP_001435304.1| - 0.00019 21.7 0.3 0.00077 19.7 0.1 2.1 2 1 0 2 2 1 1 AAA domain NB-ARC PF00931.22 gi|156937508|ref|YP_001435304.1| - 0.00077 18.7 0.7 0.68 9.1 0.0 3.0 3 0 0 3 3 3 1 NB-ARC domain TraG-D_C PF12696.7 gi|156937508|ref|YP_001435304.1| - 0.00099 19.1 0.0 0.0029 17.6 0.0 1.8 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG AAA_30 PF13604.6 gi|156937508|ref|YP_001435304.1| - 0.0011 18.7 0.1 0.0025 17.5 0.1 1.5 1 1 0 1 1 1 1 AAA domain T4SS-DNA_transf PF02534.14 gi|156937508|ref|YP_001435304.1| - 0.0034 16.2 0.2 0.0063 15.4 0.0 1.4 2 0 0 2 2 2 1 Type IV secretory system Conjugative DNA transfer T2SSE PF00437.20 gi|156937508|ref|YP_001435304.1| - 0.004 16.3 0.0 0.0073 15.4 0.0 1.4 1 1 0 1 1 1 1 Type II/IV secretion system protein Helicase_RecD PF05127.14 gi|156937508|ref|YP_001435304.1| - 0.0061 16.4 0.0 0.014 15.3 0.0 1.6 1 0 0 1 1 1 1 Helicase AAA_29 PF13555.6 gi|156937508|ref|YP_001435304.1| - 0.0089 15.8 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 gi|156937508|ref|YP_001435304.1| - 0.0091 15.9 0.1 0.024 14.5 0.1 1.7 2 0 0 2 2 1 1 NACHT domain AAA_16 PF13191.6 gi|156937508|ref|YP_001435304.1| - 0.0097 16.3 0.0 0.023 15.1 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain DUF2075 PF09848.9 gi|156937508|ref|YP_001435304.1| - 0.018 14.3 0.0 0.23 10.6 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ABC_tran PF00005.27 gi|156937508|ref|YP_001435304.1| - 0.021 15.4 0.6 0.064 13.8 0.5 1.8 1 1 0 1 1 1 0 ABC transporter AAA_18 PF13238.6 gi|156937508|ref|YP_001435304.1| - 0.022 15.3 0.0 0.064 13.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 gi|156937508|ref|YP_001435304.1| - 0.032 14.2 0.1 0.3 11.1 0.1 2.6 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|156937508|ref|YP_001435304.1| - 0.045 13.7 0.5 0.29 11.0 0.0 2.4 3 0 0 3 3 3 0 RsgA GTPase DUF815 PF05673.13 gi|156937508|ref|YP_001435304.1| - 0.088 12.0 0.5 1.2 8.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) RsgI_N PF12791.7 gi|156937508|ref|YP_001435304.1| - 0.11 12.4 0.4 0.93 9.4 0.0 2.5 3 0 0 3 3 2 0 Anti-sigma factor N-terminus cobW PF02492.19 gi|156937508|ref|YP_001435304.1| - 0.12 12.0 0.3 0.26 10.9 0.3 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|156937508|ref|YP_001435304.1| - 0.14 12.3 0.1 0.4 10.8 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|156937508|ref|YP_001435304.1| - 0.15 12.2 0.0 0.47 10.6 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|156937508|ref|YP_001435304.1| - 0.3 11.6 4.6 1 9.8 0.0 2.6 3 0 0 3 3 2 0 AAA domain Nmad4 PF18756.1 gi|156937509|ref|YP_001435305.1| - 0.14 12.5 0.1 0.31 11.4 0.1 1.5 1 0 0 1 1 1 0 Nucleotide modification associated domain 4 PAPS_reduct PF01507.19 gi|156937510|ref|YP_001435306.1| - 4.3e-42 144.1 0.0 7.4e-42 143.3 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family Fer4_8 PF13183.6 gi|156937510|ref|YP_001435306.1| - 5e-07 30.1 2.0 0.036 14.5 0.2 2.9 3 0 0 3 3 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|156937510|ref|YP_001435306.1| - 2e-06 27.8 10.0 4.1e-06 26.8 7.4 2.4 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156937510|ref|YP_001435306.1| - 3.3e-06 26.7 15.8 0.00028 20.6 4.1 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156937510|ref|YP_001435306.1| - 4.5e-06 27.2 11.7 4.5e-06 27.2 11.7 2.0 2 0 0 2 2 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|156937510|ref|YP_001435306.1| - 7.2e-06 26.5 2.2 0.094 13.3 0.2 2.8 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937510|ref|YP_001435306.1| - 8.8e-05 22.4 12.4 0.00049 20.1 3.3 2.8 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|156937510|ref|YP_001435306.1| - 0.00013 21.8 11.9 0.0013 18.7 4.3 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|156937510|ref|YP_001435306.1| - 0.00017 21.7 16.3 0.00019 21.5 11.4 2.9 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937510|ref|YP_001435306.1| - 0.00045 21.1 4.1 0.00045 21.1 4.1 2.9 2 1 1 3 3 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|156937510|ref|YP_001435306.1| - 0.00062 19.8 11.4 0.00062 19.8 11.4 2.1 3 0 0 3 3 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156937510|ref|YP_001435306.1| - 0.019 15.7 0.2 0.019 15.7 0.2 3.0 3 0 0 3 3 3 0 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|156937510|ref|YP_001435306.1| - 0.035 14.6 5.8 0.1 13.1 0.1 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Diphthami_syn_2 PF01902.17 gi|156937510|ref|YP_001435306.1| - 0.074 12.6 0.0 4.9 6.6 0.0 2.3 2 0 0 2 2 2 0 Diphthamide synthase UPF0113 PF03657.13 gi|156937510|ref|YP_001435306.1| - 0.1 12.9 0.0 0.26 11.6 0.0 1.6 1 0 0 1 1 1 0 UPF0113 PUA domain Peptidase_M28 PF04389.17 gi|156937512|ref|YP_001435308.1| - 0.014 15.0 0.5 0.33 10.6 0.0 2.2 1 1 1 2 2 2 0 Peptidase family M28 PTH2 PF01981.16 gi|156937513|ref|YP_001435309.1| - 3.2e-38 130.6 0.1 3.5e-38 130.5 0.1 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 RNA_Me_trans PF04252.13 gi|156937514|ref|YP_001435310.1| - 9.3e-09 35.1 0.0 1.4e-08 34.5 0.0 1.2 1 0 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase AAA_31 PF13614.6 gi|156937515|ref|YP_001435311.1| - 6.3e-13 49.0 0.0 2.3e-12 47.2 0.0 1.7 1 1 0 2 2 2 1 AAA domain CBP_BcsQ PF06564.12 gi|156937515|ref|YP_001435311.1| - 8.4e-11 41.8 0.0 1.2e-10 41.3 0.0 1.2 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ CbiA PF01656.23 gi|156937515|ref|YP_001435311.1| - 2.2e-07 31.0 0.0 3e-07 30.5 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|156937515|ref|YP_001435311.1| - 4.5e-05 23.0 2.0 7.9e-05 22.2 2.0 1.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|156937515|ref|YP_001435311.1| - 0.00019 20.7 2.8 0.00091 18.5 0.1 2.2 2 1 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|156937515|ref|YP_001435311.1| - 0.00086 18.7 0.8 0.012 14.9 0.8 2.1 1 1 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.6 gi|156937515|ref|YP_001435311.1| - 0.015 15.1 1.3 0.43 10.4 0.1 2.2 2 1 0 2 2 2 0 AAA domain Fer4_NifH PF00142.18 gi|156937515|ref|YP_001435311.1| - 0.033 13.6 0.1 0.06 12.8 0.1 1.6 1 1 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Ribosomal_S28e PF01200.18 gi|156937516|ref|YP_001435312.1| - 7.2e-30 102.8 4.3 8.9e-30 102.5 4.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S28e Ribosomal_L24e PF01246.20 gi|156937517|ref|YP_001435313.1| - 3.7e-24 84.7 1.3 3.9e-24 84.7 1.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|156937517|ref|YP_001435313.1| - 1.7e-07 31.0 1.2 2.2e-07 30.7 1.2 1.1 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-FLZ PF04570.14 gi|156937517|ref|YP_001435313.1| - 0.0023 17.3 1.2 0.0032 16.9 1.2 1.3 1 0 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 YHS PF04945.13 gi|156937517|ref|YP_001435313.1| - 0.0073 16.4 0.2 0.0099 16.0 0.2 1.2 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|156937517|ref|YP_001435313.1| - 0.054 13.8 0.2 0.097 13.0 0.2 1.5 1 0 0 1 1 1 0 Archaeal TRASH domain VATC PF18716.1 gi|156937517|ref|YP_001435313.1| - 0.16 11.9 4.2 0.6 10.0 4.2 1.8 1 1 0 1 1 1 0 Vms1-associating treble clef domain NosL PF05573.12 gi|156937517|ref|YP_001435313.1| - 0.17 12.2 0.0 0.18 12.1 0.0 1.1 1 0 0 1 1 1 0 NosL zf-HIT PF04438.16 gi|156937517|ref|YP_001435313.1| - 0.44 10.5 5.0 25 4.8 5.0 2.3 1 1 0 1 1 1 0 HIT zinc finger NDK PF00334.19 gi|156937518|ref|YP_001435314.1| - 3.2e-57 192.3 0.0 3.6e-57 192.1 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase HTH_28 PF13518.6 gi|156937519|ref|YP_001435315.1| - 0.041 14.0 1.3 35 4.6 0.0 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain PrpR_N PF06506.11 gi|156937519|ref|YP_001435315.1| - 0.13 11.8 0.0 0.19 11.3 0.0 1.2 1 0 0 1 1 1 0 Propionate catabolism activator AP_endonuc_2 PF01261.24 gi|156937519|ref|YP_001435315.1| - 0.14 11.5 0.0 0.2 11.1 0.0 1.1 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel SDH_sah PF01972.16 gi|156937520|ref|YP_001435316.1| - 6.7e-05 22.0 0.5 0.12 11.3 0.0 2.0 2 0 0 2 2 2 2 Serine dehydrogenase proteinase RRM_5 PF13893.6 gi|156937520|ref|YP_001435316.1| - 0.025 14.2 0.2 0.065 12.8 0.0 1.7 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Rad10 PF03834.14 gi|156937520|ref|YP_001435316.1| - 0.085 12.9 1.8 6.3 6.9 0.0 2.5 2 1 0 2 2 2 0 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) Semialdhyde_dh PF01118.24 gi|156937521|ref|YP_001435317.1| - 8.8e-31 106.9 0.0 2.4e-30 105.4 0.0 1.7 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|156937521|ref|YP_001435317.1| - 8e-12 45.6 0.0 1.1e-11 45.1 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Sacchrp_dh_NADP PF03435.18 gi|156937521|ref|YP_001435317.1| - 0.0043 17.3 0.0 0.0076 16.5 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NmrA PF05368.13 gi|156937521|ref|YP_001435317.1| - 0.091 12.3 0.0 0.17 11.4 0.0 1.4 1 1 0 1 1 1 0 NmrA-like family BPD_transp_2 PF02653.16 gi|156937522|ref|YP_001435318.1| - 3e-25 88.9 62.5 7.5e-25 87.6 55.4 2.7 2 1 0 2 2 2 1 Branched-chain amino acid transport system / permease component BPD_transp_2 PF02653.16 gi|156937523|ref|YP_001435319.1| - 1.6e-47 161.9 28.4 1.6e-47 161.9 28.4 1.3 2 0 0 2 2 2 1 Branched-chain amino acid transport system / permease component DUF1294 PF06961.13 gi|156937523|ref|YP_001435319.1| - 0.44 10.8 1.8 16 5.8 0.6 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1294) LapA_dom PF06305.11 gi|156937523|ref|YP_001435319.1| - 3.4 7.5 16.6 0.18 11.7 1.0 4.7 4 0 0 4 4 4 0 Lipopolysaccharide assembly protein A domain ABC_tran PF00005.27 gi|156937524|ref|YP_001435320.1| - 1.9e-31 109.4 0.0 2.4e-31 109.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156937524|ref|YP_001435320.1| - 7.1e-10 39.2 0.4 3.3e-05 23.9 0.1 2.1 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system BCA_ABC_TP_C PF12399.8 gi|156937524|ref|YP_001435320.1| - 4.3e-08 32.9 0.0 9.6e-08 31.8 0.0 1.6 1 0 0 1 1 1 1 Branched-chain amino acid ATP-binding cassette transporter AAA_29 PF13555.6 gi|156937524|ref|YP_001435320.1| - 8.3e-06 25.5 0.2 1.4e-05 24.7 0.2 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain SMC_N PF02463.19 gi|156937524|ref|YP_001435320.1| - 4.5e-05 23.0 0.5 0.0069 15.8 0.2 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|156937524|ref|YP_001435320.1| - 0.00024 21.7 0.1 0.00039 21.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|156937524|ref|YP_001435320.1| - 0.0017 18.2 0.0 0.0096 15.7 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|156937524|ref|YP_001435320.1| - 0.0077 16.5 0.2 0.062 13.6 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156937524|ref|YP_001435320.1| - 0.015 15.1 0.0 0.027 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|156937524|ref|YP_001435320.1| - 0.018 14.9 0.4 0.034 14.0 0.1 1.6 2 0 0 2 2 2 0 RsgA GTPase SRP54 PF00448.22 gi|156937524|ref|YP_001435320.1| - 0.03 14.0 0.1 0.05 13.2 0.1 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ABC_ATPase PF09818.9 gi|156937524|ref|YP_001435320.1| - 0.053 12.3 0.4 0.27 10.0 0.1 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class FeoB_N PF02421.18 gi|156937524|ref|YP_001435320.1| - 0.074 12.6 0.2 0.23 11.0 0.1 1.8 2 0 0 2 2 2 0 Ferrous iron transport protein B MMR_HSR1 PF01926.23 gi|156937524|ref|YP_001435320.1| - 0.11 12.5 0.0 0.7 10.0 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_25 PF13481.6 gi|156937524|ref|YP_001435320.1| - 0.13 11.8 0.0 0.23 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|156937524|ref|YP_001435320.1| - 0.14 12.5 0.0 0.18 12.2 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain AAA_5 PF07728.14 gi|156937524|ref|YP_001435320.1| - 0.14 12.1 0.0 1.4 8.9 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|156937524|ref|YP_001435320.1| - 0.16 12.4 0.1 0.36 11.3 0.1 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ABC_tran PF00005.27 gi|156937525|ref|YP_001435321.1| - 4.8e-35 121.1 0.0 6.6e-35 120.6 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156937525|ref|YP_001435321.1| - 5.2e-13 49.5 0.3 6.4e-07 29.5 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156937525|ref|YP_001435321.1| - 3.4e-09 36.5 1.0 8.8e-08 31.9 1.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|156937525|ref|YP_001435321.1| - 7.6e-05 22.4 0.0 0.00025 20.7 0.0 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain ABC_ATPase PF09818.9 gi|156937525|ref|YP_001435321.1| - 7.8e-05 21.6 0.9 0.076 11.8 0.2 2.6 2 1 0 2 2 2 2 Predicted ATPase of the ABC class AAA_23 PF13476.6 gi|156937525|ref|YP_001435321.1| - 0.0001 22.9 0.2 0.00026 21.5 0.1 1.6 2 0 0 2 2 2 1 AAA domain Dynamin_N PF00350.23 gi|156937525|ref|YP_001435321.1| - 0.0002 21.5 0.1 0.0004 20.5 0.1 1.6 1 1 0 1 1 1 1 Dynamin family AAA_15 PF13175.6 gi|156937525|ref|YP_001435321.1| - 0.0003 20.6 0.1 0.0005 19.9 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|156937525|ref|YP_001435321.1| - 0.00068 19.8 0.1 0.0028 17.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 gi|156937525|ref|YP_001435321.1| - 0.0024 17.9 0.0 0.0052 16.8 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase ATPase_2 PF01637.18 gi|156937525|ref|YP_001435321.1| - 0.0026 17.7 0.4 0.0069 16.3 0.4 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea RsgA_GTPase PF03193.16 gi|156937525|ref|YP_001435321.1| - 0.0043 17.0 0.1 0.01 15.7 0.1 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA_27 PF13514.6 gi|156937525|ref|YP_001435321.1| - 0.0058 16.2 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|156937525|ref|YP_001435321.1| - 0.0063 16.8 0.2 0.059 13.7 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|156937525|ref|YP_001435321.1| - 0.0067 16.8 0.2 0.011 16.1 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_25 PF13481.6 gi|156937525|ref|YP_001435321.1| - 0.015 14.9 0.2 0.22 11.0 0.2 2.7 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|156937525|ref|YP_001435321.1| - 0.02 13.9 0.9 0.038 13.0 0.3 1.7 1 1 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 gi|156937525|ref|YP_001435321.1| - 0.021 14.5 0.2 0.047 13.4 0.0 1.7 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|156937525|ref|YP_001435321.1| - 0.025 13.8 0.2 0.058 12.6 0.2 1.6 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|156937525|ref|YP_001435321.1| - 0.039 13.9 0.1 0.082 12.8 0.1 1.5 1 0 0 1 1 1 0 NACHT domain cobW PF02492.19 gi|156937525|ref|YP_001435321.1| - 0.048 13.3 0.2 0.1 12.2 0.1 1.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_14 PF13173.6 gi|156937525|ref|YP_001435321.1| - 0.06 13.4 0.1 0.18 11.9 0.1 1.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 gi|156937525|ref|YP_001435321.1| - 0.066 13.6 0.2 0.13 12.7 0.2 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DLIC PF05783.11 gi|156937525|ref|YP_001435321.1| - 0.11 11.3 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) IstB_IS21 PF01695.17 gi|156937525|ref|YP_001435321.1| - 0.11 12.2 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|156937525|ref|YP_001435321.1| - 0.14 12.7 0.7 0.35 11.4 0.7 1.8 1 1 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|156937525|ref|YP_001435321.1| - 0.15 11.8 0.1 0.31 10.8 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AA_kinase PF00696.28 gi|156937526|ref|YP_001435322.1| - 3.5e-21 75.9 0.0 7.4e-20 71.6 0.0 2.0 1 1 0 1 1 1 1 Amino acid kinase family DUF87 PF01935.17 gi|156937528|ref|YP_001435324.1| - 4.5e-37 128.3 1.5 8.2e-37 127.5 1.5 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|156937528|ref|YP_001435324.1| - 4.6e-08 32.1 0.5 6.2e-05 21.8 0.0 2.5 2 1 1 3 3 3 2 Bacterial protein of unknown function (DUF853) HAS-barrel PF09378.10 gi|156937528|ref|YP_001435324.1| - 0.00025 21.1 0.0 0.00069 19.7 0.0 1.8 1 0 0 1 1 1 1 HAS barrel domain TrwB_AAD_bind PF10412.9 gi|156937528|ref|YP_001435324.1| - 0.0064 15.4 0.1 0.014 14.3 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.15 gi|156937528|ref|YP_001435324.1| - 0.016 15.2 0.3 0.19 11.7 0.0 2.3 1 1 1 2 2 2 0 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 gi|156937528|ref|YP_001435324.1| - 0.13 11.6 0.3 7.1 5.9 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family NurA PF09376.10 gi|156937529|ref|YP_001435325.1| - 7.7e-15 55.2 0.1 6.1e-14 52.3 0.1 2.0 1 1 0 1 1 1 1 NurA domain DUF600 PF04634.12 gi|156937530|ref|YP_001435326.1| - 0.0076 16.3 0.0 0.0095 16.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF600 Peptidase_M17 PF00883.21 gi|156937531|ref|YP_001435327.1| - 6.8e-107 357.3 0.0 9.3e-107 356.9 0.0 1.2 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain CbiA PF01656.23 gi|156937534|ref|YP_001435330.1| - 1.4e-10 41.3 0.0 2.8e-10 40.4 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|156937534|ref|YP_001435330.1| - 5.3e-10 39.2 0.0 1.1e-09 38.2 0.0 1.5 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|156937534|ref|YP_001435330.1| - 7.8e-08 32.4 0.0 1.3e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|156937534|ref|YP_001435330.1| - 0.0032 16.7 0.0 0.0074 15.5 0.0 1.5 1 0 0 1 1 1 1 Anion-transporting ATPase DnaB_C PF03796.15 gi|156937534|ref|YP_001435330.1| - 0.012 15.0 0.0 0.016 14.5 0.0 1.2 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain MipZ PF09140.11 gi|156937534|ref|YP_001435330.1| - 0.029 13.6 0.0 0.076 12.3 0.0 1.6 2 0 0 2 2 2 0 ATPase MipZ Ribonuclease_P PF00825.18 gi|156937535|ref|YP_001435331.1| - 0.097 12.8 0.3 16 5.6 0.1 2.2 2 0 0 2 2 2 0 Ribonuclease P E3_UbLigase_EDD PF11547.8 gi|156937535|ref|YP_001435331.1| - 0.89 9.3 3.4 11 5.8 0.0 3.1 3 0 0 3 3 3 0 E3 ubiquitin ligase EDD DUF4032 PF13224.6 gi|156937536|ref|YP_001435332.1| - 0.045 13.6 0.0 0.076 12.9 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4032) SP24 PF16504.5 gi|156937536|ref|YP_001435332.1| - 0.17 11.9 0.0 0.27 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative virion membrane protein of plant and insect virus DmpG_comm PF07836.11 gi|156937537|ref|YP_001435333.1| - 0.19 11.3 0.0 0.32 10.6 0.0 1.3 1 0 0 1 1 1 0 DmpG-like communication domain APG6_N PF17675.1 gi|156937538|ref|YP_001435334.1| - 0.0026 18.3 0.9 0.0048 17.4 0.9 1.4 1 1 0 1 1 1 1 Apg6 coiled-coil region Apolipoprotein PF01442.18 gi|156937538|ref|YP_001435334.1| - 0.013 15.4 0.9 1.5 8.7 0.1 2.1 2 0 0 2 2 2 0 Apolipoprotein A1/A4/E domain SIKE PF05769.11 gi|156937538|ref|YP_001435334.1| - 0.014 15.4 0.7 0.065 13.2 0.6 1.9 1 1 0 1 1 1 0 SIKE family DUF3786 PF12654.7 gi|156937538|ref|YP_001435334.1| - 0.016 14.8 0.0 0.018 14.7 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3786) ApoLp-III PF07464.11 gi|156937538|ref|YP_001435334.1| - 0.016 15.3 0.1 5.8 7.0 0.0 2.1 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) OmpH PF03938.14 gi|156937538|ref|YP_001435334.1| - 0.017 15.4 0.3 0.21 11.9 0.1 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Vps53_N PF04100.12 gi|156937538|ref|YP_001435334.1| - 0.025 13.6 2.4 2.3 7.1 0.4 2.0 2 0 0 2 2 2 0 Vps53-like, N-terminal CdvA PF18822.1 gi|156937538|ref|YP_001435334.1| - 0.049 13.4 1.4 1.5 8.7 0.2 2.2 2 0 0 2 2 2 0 CdvA-like coiled-coil domain Swi5 PF07061.11 gi|156937538|ref|YP_001435334.1| - 0.07 13.2 0.6 4.7 7.4 0.1 2.2 2 0 0 2 2 2 0 Swi5 Fungal_TACC PF12709.7 gi|156937538|ref|YP_001435334.1| - 0.077 13.5 0.8 0.7 10.4 0.1 2.1 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF2058 PF09831.9 gi|156937538|ref|YP_001435334.1| - 0.097 12.8 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2058) WXG100 PF06013.12 gi|156937538|ref|YP_001435334.1| - 0.1 12.8 0.1 3.2 8.1 0.0 2.2 2 0 0 2 2 2 0 Proteins of 100 residues with WXG DUF4140 PF13600.6 gi|156937538|ref|YP_001435334.1| - 0.13 12.7 1.3 24 5.4 0.0 2.9 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) BST2 PF16716.5 gi|156937538|ref|YP_001435334.1| - 0.26 11.9 0.8 3.7 8.2 0.1 2.1 2 0 0 2 2 2 0 Bone marrow stromal antigen 2 Cep57_CLD_2 PF14197.6 gi|156937538|ref|YP_001435334.1| - 0.66 10.1 5.1 1.5 8.9 0.2 2.6 3 0 0 3 3 3 0 Centrosome localisation domain of PPC89 Pox_A_type_inc PF04508.12 gi|156937538|ref|YP_001435334.1| - 1.3 9.0 3.8 1.3 9.0 0.4 2.5 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat Meth_synt_2 PF01717.18 gi|156937540|ref|YP_001435336.1| - 8.1e-67 225.8 0.0 9.5e-67 225.6 0.0 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|156937540|ref|YP_001435336.1| - 4.2e-20 72.5 0.8 7e-16 58.6 0.1 2.1 1 1 1 2 2 2 2 Cobalamin-independent synthase, N-terminal domain Proteasome PF00227.26 gi|156937540|ref|YP_001435336.1| - 0.012 15.1 0.0 0.029 13.9 0.0 1.6 1 0 0 1 1 1 0 Proteasome subunit SHOCT PF09851.9 gi|156937540|ref|YP_001435336.1| - 0.019 14.7 5.5 0.41 10.5 1.0 2.7 2 0 0 2 2 2 0 Short C-terminal domain Meth_synt_1 PF08267.12 gi|156937541|ref|YP_001435337.1| - 4e-14 52.9 0.0 2.8e-11 43.5 0.1 2.1 2 0 0 2 2 2 2 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 gi|156937541|ref|YP_001435337.1| - 1.2e-05 24.8 0.0 1.8e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Methyltransf_25 PF13649.6 gi|156937542|ref|YP_001435338.1| - 9.8e-19 67.9 0.0 1.6e-18 67.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156937542|ref|YP_001435338.1| - 1.1e-17 64.4 0.0 2.1e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|156937542|ref|YP_001435338.1| - 8.2e-11 41.9 0.0 1.2e-10 41.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|156937542|ref|YP_001435338.1| - 1.5e-08 34.3 0.0 3.7e-08 33.0 0.0 1.6 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|156937542|ref|YP_001435338.1| - 2.5e-08 34.6 0.0 3.8e-08 34.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|156937542|ref|YP_001435338.1| - 2.8e-07 30.5 0.0 4.1e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|156937542|ref|YP_001435338.1| - 7.6e-05 22.1 0.0 0.00011 21.6 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 gi|156937542|ref|YP_001435338.1| - 0.0001 22.0 0.0 0.00017 21.3 0.0 1.3 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW PCMT PF01135.19 gi|156937542|ref|YP_001435338.1| - 0.00011 22.0 0.0 0.00019 21.3 0.0 1.4 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) NodS PF05401.11 gi|156937542|ref|YP_001435338.1| - 0.086 12.4 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Nodulation protein S (NodS) HTH_12 PF08461.10 gi|156937543|ref|YP_001435339.1| - 2.8e-05 24.0 0.2 0.00019 21.3 0.1 2.2 2 0 0 2 2 2 1 Ribonuclease R winged-helix domain AAA_22 PF13401.6 gi|156937543|ref|YP_001435339.1| - 0.016 15.4 0.0 0.43 10.9 0.0 2.6 2 1 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|156937543|ref|YP_001435339.1| - 0.048 13.6 0.3 6.5 6.6 0.0 2.5 3 0 0 3 3 3 0 NACHT domain Methyltrn_RNA_3 PF02598.17 gi|156937544|ref|YP_001435340.1| - 1.6e-27 96.8 0.0 3.4e-27 95.7 0.0 1.5 1 1 0 1 1 1 1 Putative RNA methyltransferase Semialdhyde_dhC PF02774.18 gi|156937545|ref|YP_001435341.1| - 5.9e-36 124.3 0.1 8e-36 123.8 0.1 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Semialdhyde_dh PF01118.24 gi|156937545|ref|YP_001435341.1| - 2.5e-32 111.9 0.0 4.7e-32 111.0 0.0 1.5 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Gp_dh_C PF02800.20 gi|156937545|ref|YP_001435341.1| - 0.00043 19.9 1.5 0.05 13.2 1.5 2.4 1 1 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFO_IDH_MocA PF01408.22 gi|156937545|ref|YP_001435341.1| - 0.00066 20.5 0.0 0.002 19.0 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold DapB_N PF01113.20 gi|156937545|ref|YP_001435341.1| - 0.044 13.9 0.0 0.14 12.3 0.0 1.9 2 1 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus DUF969 PF06149.12 gi|156937545|ref|YP_001435341.1| - 0.074 12.5 0.0 0.12 11.8 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF969) Phage_T4_gp19 PF06841.12 gi|156937545|ref|YP_001435341.1| - 0.15 11.9 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 T4-like virus tail tube protein gp19 FlpD PF02662.16 gi|156937545|ref|YP_001435341.1| - 0.2 11.7 0.0 5.1 7.1 0.0 2.3 2 0 0 2 2 2 0 Methyl-viologen-reducing hydrogenase, delta subunit RNase_Zc3h12a PF11977.8 gi|156937546|ref|YP_001435342.1| - 4.6e-27 94.7 0.0 7e-27 94.1 0.0 1.3 1 0 0 1 1 1 1 Zc3h12a-like Ribonuclease NYN domain Gas_vesicle PF00741.18 gi|156937546|ref|YP_001435342.1| - 0.024 14.8 0.1 0.063 13.4 0.0 1.8 2 0 0 2 2 2 0 Gas vesicle protein DUF5615 PF18480.1 gi|156937546|ref|YP_001435342.1| - 0.058 13.2 0.1 1.1 9.1 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5615) HisG PF01634.18 gi|156937547|ref|YP_001435343.1| - 7.5e-48 162.5 0.1 1.3e-47 161.7 0.0 1.4 2 0 0 2 2 2 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|156937547|ref|YP_001435343.1| - 2.3e-23 82.1 1.0 4e-23 81.4 1.0 1.4 1 0 0 1 1 1 1 HisG, C-terminal domain NMT1 PF09084.11 gi|156937547|ref|YP_001435343.1| - 4e-05 23.7 0.0 0.22 11.5 0.0 2.4 1 1 1 2 2 2 2 NMT1/THI5 like AsnC_trans_reg2 PF17805.1 gi|156937547|ref|YP_001435343.1| - 0.066 13.4 0.0 0.16 12.1 0.0 1.6 1 1 0 1 1 1 0 AsnC-like ligand binding domain FeoA PF04023.14 gi|156937548|ref|YP_001435344.1| - 0.071 13.4 0.1 0.22 11.8 0.0 1.9 2 0 0 2 2 2 0 FeoA domain Cytidylate_kin2 PF13189.6 gi|156937549|ref|YP_001435345.1| - 4.2e-22 79.1 0.1 9.6e-12 45.4 0.0 2.0 1 1 1 2 2 2 2 Cytidylate kinase-like family AAA_18 PF13238.6 gi|156937549|ref|YP_001435345.1| - 5.4e-17 62.6 0.0 7.1e-17 62.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|156937549|ref|YP_001435345.1| - 3.1e-16 59.8 0.1 9.8e-09 35.3 0.1 2.1 1 1 1 2 2 2 2 Cytidylate kinase AAA_17 PF13207.6 gi|156937549|ref|YP_001435345.1| - 1.6e-14 54.5 0.0 3.7e-14 53.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|156937549|ref|YP_001435345.1| - 2.5e-08 34.2 0.1 1.2e-06 28.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|156937549|ref|YP_001435345.1| - 1.8e-06 28.2 0.4 1.2e-05 25.5 0.4 2.1 1 1 0 1 1 1 1 Shikimate kinase AAA_28 PF13521.6 gi|156937549|ref|YP_001435345.1| - 4.7e-06 26.9 0.0 8.3e-06 26.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|156937549|ref|YP_001435345.1| - 8.7e-06 26.2 0.1 2.4e-05 24.7 0.1 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) dNK PF01712.19 gi|156937549|ref|YP_001435345.1| - 1.4e-05 25.0 0.1 0.04 13.8 0.0 2.2 1 1 0 2 2 2 2 Deoxynucleoside kinase CoaE PF01121.20 gi|156937549|ref|YP_001435345.1| - 1.8e-05 24.5 0.0 0.0088 15.7 0.0 2.1 2 0 0 2 2 2 2 Dephospho-CoA kinase ADK PF00406.22 gi|156937549|ref|YP_001435345.1| - 1.9e-05 24.8 0.0 3.4e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Adenylate kinase KTI12 PF08433.10 gi|156937549|ref|YP_001435345.1| - 0.00021 20.9 0.1 0.00028 20.4 0.1 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_22 PF13401.6 gi|156937549|ref|YP_001435345.1| - 0.00032 21.0 0.1 0.00064 20.0 0.1 1.7 1 1 0 1 1 1 1 AAA domain Rad17 PF03215.15 gi|156937549|ref|YP_001435345.1| - 0.00042 20.3 0.1 0.0016 18.4 0.1 1.9 1 1 1 2 2 2 1 Rad17 P-loop domain AAA_16 PF13191.6 gi|156937549|ref|YP_001435345.1| - 0.00064 20.2 0.2 0.00089 19.7 0.2 1.5 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 gi|156937549|ref|YP_001435345.1| - 0.0009 19.0 0.0 0.0016 18.2 0.0 1.5 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 gi|156937549|ref|YP_001435345.1| - 0.0011 19.3 0.0 0.0017 18.7 0.0 1.3 1 0 0 1 1 1 1 RNA helicase NTPase_1 PF03266.15 gi|156937549|ref|YP_001435345.1| - 0.0017 18.3 0.1 0.0039 17.1 0.0 1.7 2 1 0 1 1 1 1 NTPase AAA_30 PF13604.6 gi|156937549|ref|YP_001435345.1| - 0.0021 17.8 0.5 0.084 12.6 0.2 2.6 1 1 2 3 3 3 1 AAA domain NACHT PF05729.12 gi|156937549|ref|YP_001435345.1| - 0.0023 17.8 0.0 0.0036 17.2 0.0 1.3 1 0 0 1 1 1 1 NACHT domain Zeta_toxin PF06414.12 gi|156937549|ref|YP_001435345.1| - 0.0033 16.7 0.2 0.0082 15.4 0.1 1.7 2 0 0 2 2 2 1 Zeta toxin Guanylate_kin PF00625.21 gi|156937549|ref|YP_001435345.1| - 0.0045 16.7 0.1 0.027 14.2 0.0 1.9 2 0 0 2 2 2 1 Guanylate kinase AAA_5 PF07728.14 gi|156937549|ref|YP_001435345.1| - 0.007 16.4 0.1 0.011 15.7 0.1 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Viral_helicase1 PF01443.18 gi|156937549|ref|YP_001435345.1| - 0.012 15.3 0.0 0.016 14.9 0.0 1.2 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_24 PF13479.6 gi|156937549|ref|YP_001435345.1| - 0.014 15.2 0.1 0.044 13.5 0.1 1.8 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 gi|156937549|ref|YP_001435345.1| - 0.014 14.6 0.1 0.019 14.3 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Thymidylate_kin PF02223.17 gi|156937549|ref|YP_001435345.1| - 0.015 14.9 0.2 3.5 7.3 0.0 2.4 1 1 0 2 2 2 0 Thymidylate kinase APS_kinase PF01583.20 gi|156937549|ref|YP_001435345.1| - 0.016 15.1 0.0 0.063 13.2 0.0 1.9 2 0 0 2 2 2 0 Adenylylsulphate kinase ABC_tran PF00005.27 gi|156937549|ref|YP_001435345.1| - 0.018 15.6 0.0 0.022 15.3 0.0 1.3 1 0 0 1 1 1 0 ABC transporter PRK PF00485.18 gi|156937549|ref|YP_001435345.1| - 0.031 14.0 0.0 0.11 12.2 0.0 1.8 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family Mg_chelatase PF01078.21 gi|156937549|ref|YP_001435345.1| - 0.036 13.4 0.2 0.082 12.3 0.1 1.6 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI ParA PF10609.9 gi|156937549|ref|YP_001435345.1| - 0.038 13.4 0.6 0.057 12.9 0.6 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase AAA_14 PF13173.6 gi|156937549|ref|YP_001435345.1| - 0.039 14.0 0.0 0.061 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|156937549|ref|YP_001435345.1| - 0.047 12.9 0.0 0.067 12.4 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain cobW PF02492.19 gi|156937549|ref|YP_001435345.1| - 0.08 12.5 0.1 0.16 11.6 0.1 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 gi|156937549|ref|YP_001435345.1| - 0.086 12.4 0.1 0.13 11.8 0.1 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|156937549|ref|YP_001435345.1| - 0.087 12.6 0.1 0.18 11.6 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain MeaB PF03308.16 gi|156937549|ref|YP_001435345.1| - 0.1 11.5 0.2 0.16 10.9 0.2 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ATPase_2 PF01637.18 gi|156937549|ref|YP_001435345.1| - 0.11 12.4 0.0 0.16 11.8 0.0 1.5 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_11 PF13086.6 gi|156937549|ref|YP_001435345.1| - 0.13 12.1 0.0 0.16 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 gi|156937549|ref|YP_001435345.1| - 0.13 12.3 0.1 0.29 11.1 0.0 1.6 1 1 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 gi|156937549|ref|YP_001435345.1| - 0.14 12.1 0.2 0.37 10.7 0.1 1.8 2 0 0 2 2 2 0 RsgA GTPase ParA PF10609.9 gi|156937550|ref|YP_001435346.1| - 2.5e-95 318.6 0.0 2.9e-95 318.4 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|156937550|ref|YP_001435346.1| - 7.6e-17 61.6 0.0 5.1e-14 52.4 0.0 2.6 2 1 0 2 2 2 2 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|156937550|ref|YP_001435346.1| - 8.3e-10 38.9 0.5 5e-08 33.1 0.1 2.2 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 gi|156937550|ref|YP_001435346.1| - 2e-09 37.3 0.0 2.8e-06 27.0 0.1 2.4 2 1 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|156937550|ref|YP_001435346.1| - 2.4e-06 27.0 0.1 4.7e-06 26.0 0.1 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|156937550|ref|YP_001435346.1| - 9.6e-05 21.8 0.0 0.00017 20.9 0.0 1.5 1 1 0 1 1 1 1 ATPase MipZ Zeta_toxin PF06414.12 gi|156937550|ref|YP_001435346.1| - 0.00062 19.1 0.0 0.00095 18.5 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 gi|156937550|ref|YP_001435346.1| - 0.0036 16.9 0.0 0.0058 16.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain CBP_BcsQ PF06564.12 gi|156937550|ref|YP_001435346.1| - 0.0044 16.5 0.0 0.023 14.2 0.0 1.9 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ MeaB PF03308.16 gi|156937550|ref|YP_001435346.1| - 0.019 13.9 0.1 0.031 13.3 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB PhoH PF02562.16 gi|156937550|ref|YP_001435346.1| - 0.023 14.1 0.0 0.045 13.2 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_30 PF13604.6 gi|156937550|ref|YP_001435346.1| - 0.024 14.3 0.0 0.042 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|156937550|ref|YP_001435346.1| - 0.048 13.3 0.1 0.085 12.5 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_26 PF13500.6 gi|156937550|ref|YP_001435346.1| - 0.056 13.3 0.4 7.7 6.3 0.0 2.3 2 1 0 2 2 2 0 AAA domain PIF1 PF05970.14 gi|156937550|ref|YP_001435346.1| - 0.19 10.9 0.1 0.29 10.3 0.1 1.2 1 0 0 1 1 1 0 PIF1-like helicase GHMP_kinases_N PF00288.26 gi|156937551|ref|YP_001435347.1| - 1.5e-14 53.9 0.3 1.5e-14 53.9 0.3 2.5 2 1 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|156937551|ref|YP_001435347.1| - 1.3e-13 51.1 5.3 1.5e-13 50.9 3.5 2.1 3 0 0 3 3 3 1 GHMP kinases C terminal FlgN PF05130.12 gi|156937551|ref|YP_001435347.1| - 0.0018 18.8 0.2 0.0028 18.2 0.2 1.2 1 0 0 1 1 1 1 FlgN protein DUF1002 PF06207.11 gi|156937551|ref|YP_001435347.1| - 0.27 10.8 2.8 0.26 10.8 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1002) Reeler PF02014.16 gi|156937552|ref|YP_001435348.1| - 7.2e-07 30.0 0.1 7.2e-07 30.0 0.1 1.6 2 0 0 2 2 2 1 Reeler domain MG4 PF17789.1 gi|156937552|ref|YP_001435348.1| - 0.065 13.4 0.1 1.3 9.2 0.0 2.5 2 1 0 2 2 2 0 Macroglobulin domain MG4 UPF0147 PF03685.13 gi|156937553|ref|YP_001435349.1| - 3.4e-34 116.7 2.1 3.8e-34 116.6 2.1 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) TEX13 PF15186.6 gi|156937553|ref|YP_001435349.1| - 0.083 12.6 0.0 0.38 10.4 0.0 1.9 1 1 1 2 2 2 0 Testis-expressed sequence 13 protein family DUF402 PF04167.13 gi|156937554|ref|YP_001435350.1| - 3.2e-15 56.0 3.6 6.5e-15 55.1 1.1 2.7 3 0 0 3 3 3 1 Protein of unknown function (DUF402) RNase_E_G PF10150.9 gi|156937554|ref|YP_001435350.1| - 0.0003 20.3 0.0 0.00066 19.2 0.0 1.6 1 0 0 1 1 1 1 Ribonuclease E/G family 2_5_RNA_ligase2 PF13563.6 gi|156937554|ref|YP_001435350.1| - 0.045 13.7 0.0 0.14 12.1 0.0 1.7 2 0 0 2 2 2 0 2'-5' RNA ligase superfamily CarS-like PF01864.17 gi|156937556|ref|YP_001435352.1| - 4e-42 144.1 4.1 9.3e-42 143.0 4.1 1.5 1 1 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|156937556|ref|YP_001435352.1| - 5.2e-07 29.7 3.2 5.3e-07 29.7 0.2 2.0 2 0 0 2 2 2 1 Cytidylyltransferase family Nop10p PF04135.12 gi|156937557|ref|YP_001435353.1| - 1.1e-24 86.2 2.3 1.4e-24 85.9 2.3 1.2 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|156937557|ref|YP_001435353.1| - 0.00047 19.7 0.3 0.00056 19.4 0.3 1.2 1 0 0 1 1 1 1 RecR protein DUF1272 PF06906.11 gi|156937557|ref|YP_001435353.1| - 0.015 15.4 1.4 0.02 15.0 1.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1272) PolC_DP2 PF03833.13 gi|156937557|ref|YP_001435353.1| - 0.026 12.4 0.1 0.026 12.4 0.1 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 zf-FPG_IleRS PF06827.14 gi|156937557|ref|YP_001435353.1| - 0.15 11.9 1.2 0.15 11.9 1.2 2.2 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS DUF35_N PF12172.8 gi|156937557|ref|YP_001435353.1| - 1 9.3 7.4 0.19 11.6 3.9 1.7 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) EIF_2_alpha PF07541.12 gi|156937558|ref|YP_001435354.1| - 1.8e-21 76.4 0.1 9.4e-21 74.1 0.0 2.1 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|156937558|ref|YP_001435354.1| - 1e-10 41.8 0.6 7.7e-10 39.0 0.0 2.5 3 0 0 3 3 3 1 S1 RNA binding domain N6_N4_Mtase PF01555.18 gi|156937558|ref|YP_001435354.1| - 0.033 13.9 0.2 0.095 12.4 0.2 1.6 1 1 1 2 2 2 0 DNA methylase SLS PF14611.6 gi|156937558|ref|YP_001435354.1| - 0.038 13.8 0.0 0.092 12.6 0.0 1.6 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator DUF1048 PF06304.11 gi|156937558|ref|YP_001435354.1| - 0.084 13.3 2.7 6.3 7.3 0.9 3.1 2 1 0 2 2 2 0 Protein of unknown function (DUF1048) AAA_17 PF13207.6 gi|156937559|ref|YP_001435355.1| - 2.3e-18 66.9 0.1 3.5e-18 66.3 0.1 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|156937559|ref|YP_001435355.1| - 8.6e-13 49.0 0.2 1.2e-12 48.5 0.2 1.2 1 0 0 1 1 1 1 AAA domain ADK PF00406.22 gi|156937559|ref|YP_001435355.1| - 1.3e-07 31.9 0.1 1.7e-07 31.4 0.1 1.3 1 0 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.6 gi|156937559|ref|YP_001435355.1| - 2e-07 31.3 0.1 3.3e-07 30.6 0.1 1.4 1 1 0 1 1 1 1 AAA domain Cytidylate_kin2 PF13189.6 gi|156937559|ref|YP_001435355.1| - 0.013 15.6 2.7 0.055 13.6 2.7 1.9 1 1 0 1 1 1 0 Cytidylate kinase-like family P-mevalo_kinase PF04275.14 gi|156937559|ref|YP_001435355.1| - 0.033 14.1 0.2 0.2 11.6 0.0 2.4 2 1 0 2 2 2 0 Phosphomevalonate kinase Leucyl-specific PF14795.6 gi|156937559|ref|YP_001435355.1| - 0.18 11.9 0.9 0.33 11.1 0.1 1.9 2 0 0 2 2 2 0 Leucine-tRNA synthetase-specific domain GnsAB_toxin PF08178.11 gi|156937559|ref|YP_001435355.1| - 0.95 9.4 4.1 6.1 6.9 0.2 2.4 2 0 0 2 2 2 0 GnsA/GnsB toxin of bacterial toxin-antitoxin system Ribosomal_S8e PF01201.22 gi|156937560|ref|YP_001435356.1| - 3.3e-32 111.5 3.4 4e-32 111.2 3.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e SRP19 PF01922.17 gi|156937561|ref|YP_001435357.1| - 3.5e-19 69.5 0.0 4.3e-19 69.2 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein Gar1 PF04410.14 gi|156937562|ref|YP_001435358.1| - 0.069 12.9 0.0 0.069 12.9 0.0 1.2 1 0 0 1 1 1 0 Gar1/Naf1 RNA binding region TF_Zn_Ribbon PF08271.12 gi|156937563|ref|YP_001435359.1| - 3.4e-09 36.1 2.0 3.4e-09 36.1 2.0 1.7 2 0 0 2 2 2 1 TFIIB zinc-binding zf-RRN7 PF11781.8 gi|156937563|ref|YP_001435359.1| - 0.0032 17.1 0.3 0.0077 15.9 0.3 1.7 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 A2L_zn_ribbon PF08792.10 gi|156937563|ref|YP_001435359.1| - 0.0045 16.7 1.1 0.011 15.5 1.1 1.6 1 0 0 1 1 1 1 A2L zinc ribbon domain RPA_interact_C PF14768.6 gi|156937563|ref|YP_001435359.1| - 0.022 15.3 0.1 0.062 13.9 0.1 1.7 1 0 0 1 1 1 0 Replication protein A interacting C-terminal zf-ribbon_3 PF13248.6 gi|156937563|ref|YP_001435359.1| - 0.039 13.4 4.2 0.11 12.0 2.6 2.4 2 1 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS91 PF14319.6 gi|156937563|ref|YP_001435359.1| - 0.043 13.9 0.5 0.13 12.3 0.2 1.9 2 0 0 2 2 2 0 Transposase zinc-binding domain Peptidase_S64 PF08192.11 gi|156937563|ref|YP_001435359.1| - 0.072 11.6 0.0 0.12 10.9 0.0 1.2 1 0 0 1 1 1 0 Peptidase family S64 Nudix_N_2 PF14803.6 gi|156937563|ref|YP_001435359.1| - 0.12 12.3 0.9 0.45 10.5 0.9 2.0 1 1 0 1 1 1 0 Nudix N-terminal Ribosomal_S27e PF01667.17 gi|156937563|ref|YP_001435359.1| - 0.14 11.8 1.3 0.31 10.8 1.3 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 DZR PF12773.7 gi|156937563|ref|YP_001435359.1| - 0.16 12.0 0.3 0.42 10.7 0.3 1.6 1 0 0 1 1 1 0 Double zinc ribbon OrfB_Zn_ribbon PF07282.11 gi|156937563|ref|YP_001435359.1| - 0.19 11.7 0.5 0.5 10.3 0.5 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain MqsA_antitoxin PF15731.5 gi|156937563|ref|YP_001435359.1| - 0.22 11.6 1.1 17 5.5 0.0 2.9 2 1 0 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Auto_anti-p27 PF06677.12 gi|156937563|ref|YP_001435359.1| - 0.29 11.3 2.1 0.55 10.4 2.1 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zinc_ribbon_2 PF13240.6 gi|156937563|ref|YP_001435359.1| - 0.73 9.6 2.4 59 3.6 0.1 3.1 2 1 1 3 3 3 0 zinc-ribbon domain Zn_ribbon_recom PF13408.6 gi|156937563|ref|YP_001435359.1| - 1 9.9 4.1 8.2 7.0 2.3 2.8 2 1 1 3 3 3 0 Recombinase zinc beta ribbon domain DNA_ligase_ZBD PF03119.16 gi|156937563|ref|YP_001435359.1| - 1.4 9.0 3.3 4.9 7.3 3.3 2.1 1 1 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain His_biosynth PF00977.21 gi|156937566|ref|YP_001435362.1| - 6.7e-95 316.9 0.8 7.6e-95 316.7 0.8 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|156937566|ref|YP_001435362.1| - 1.3e-08 34.7 2.4 4.8e-05 22.9 0.7 2.1 1 1 1 2 2 2 2 Nitronate monooxygenase TMP-TENI PF02581.17 gi|156937566|ref|YP_001435362.1| - 1.2e-06 28.0 0.6 0.0075 15.6 0.0 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase Dus PF01207.17 gi|156937566|ref|YP_001435362.1| - 1.3e-06 27.8 0.0 0.00063 18.9 0.0 2.1 2 0 0 2 2 2 2 Dihydrouridine synthase (Dus) G3P_antiterm PF04309.12 gi|156937566|ref|YP_001435362.1| - 2.2e-05 24.0 0.3 0.0012 18.3 0.1 2.1 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator ThiG PF05690.14 gi|156937566|ref|YP_001435362.1| - 2.2e-05 23.9 0.4 0.0083 15.5 0.1 2.2 2 0 0 2 2 2 2 Thiazole biosynthesis protein ThiG PcrB PF01884.17 gi|156937566|ref|YP_001435362.1| - 0.0012 18.3 0.5 0.0028 17.2 0.1 1.7 2 0 0 2 2 2 1 PcrB family IMPDH PF00478.25 gi|156937566|ref|YP_001435362.1| - 0.0049 15.9 1.1 0.042 12.8 0.1 2.1 2 0 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|156937566|ref|YP_001435362.1| - 0.0053 16.0 0.0 0.079 12.2 0.0 2.2 2 0 0 2 2 2 1 Dihydroorotate dehydrogenase Radical_SAM PF04055.21 gi|156937566|ref|YP_001435362.1| - 0.05 14.0 0.2 0.41 11.0 0.1 2.0 1 1 1 2 2 2 0 Radical SAM superfamily PEP_mutase PF13714.6 gi|156937566|ref|YP_001435362.1| - 0.054 12.9 1.2 16 4.8 0.1 3.2 2 1 1 3 3 3 0 Phosphoenolpyruvate phosphomutase DUF561 PF04481.12 gi|156937566|ref|YP_001435362.1| - 0.12 11.6 0.0 11 5.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF561) Tmemb_170 PF10190.9 gi|156937567|ref|YP_001435363.1| - 0.12 12.8 6.9 0.1 13.0 5.7 1.5 1 1 0 1 1 1 0 Putative transmembrane protein 170 ABC2_membrane_3 PF12698.7 gi|156937567|ref|YP_001435363.1| - 0.37 9.8 12.0 0.44 9.6 12.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Glycos_transf_4 PF00953.21 gi|156937568|ref|YP_001435364.1| - 2.6e-35 121.8 17.4 2.9e-35 121.6 16.5 1.6 1 1 0 1 1 1 1 Glycosyl transferase family 4 Ion_trans_N PF08412.10 gi|156937568|ref|YP_001435364.1| - 0.063 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Ion transport protein N-terminal YL1 PF05764.13 gi|156937569|ref|YP_001435365.1| - 0.0013 18.9 0.8 0.0019 18.4 0.8 1.1 1 0 0 1 1 1 1 YL1 nuclear protein Sec23_trunk PF04811.15 gi|156937569|ref|YP_001435365.1| - 0.014 14.9 0.0 0.016 14.8 0.0 1.1 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain Arabinose_Isome PF02610.15 gi|156937570|ref|YP_001435366.1| - 0.003 16.8 0.0 0.0046 16.2 0.0 1.1 1 0 0 1 1 1 1 L-arabinose isomerase Ribosomal_L21e PF01157.18 gi|156937571|ref|YP_001435367.1| - 8.7e-31 105.8 0.1 9.7e-31 105.6 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e PTPS PF01242.19 gi|156937572|ref|YP_001435368.1| - 2.8e-22 79.0 0.0 3.3e-22 78.7 0.0 1.1 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase DUF2067 PF09840.9 gi|156937574|ref|YP_001435370.1| - 0.058 13.0 0.1 0.068 12.7 0.1 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) HTH_52 PF18576.1 gi|156937574|ref|YP_001435370.1| - 0.15 12.3 0.1 0.63 10.3 0.1 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain KH_1 PF00013.29 gi|156937575|ref|YP_001435371.1| - 5.6e-06 26.1 4.2 5.6e-06 26.1 4.2 1.9 2 0 0 2 2 2 1 KH domain SPECT1 PF18680.1 gi|156937575|ref|YP_001435371.1| - 0.028 14.1 0.7 0.042 13.5 0.7 1.3 1 0 0 1 1 1 0 Plasmodium host cell traversal SPECT1 SLS PF14611.6 gi|156937575|ref|YP_001435371.1| - 0.048 13.5 4.1 0.42 10.4 1.5 2.1 1 1 1 2 2 2 0 Mitochondrial inner-membrane-bound regulator Ribosomal_L36e PF01158.18 gi|156937575|ref|YP_001435371.1| - 0.12 12.6 1.9 0.13 12.5 0.4 1.8 2 0 0 2 2 2 0 Ribosomal protein L36e NTP_transf_2 PF01909.23 gi|156937576|ref|YP_001435372.1| - 0.00065 19.9 0.0 0.0013 19.0 0.0 1.6 1 0 0 1 1 1 1 Nucleotidyltransferase domain Sigma70_r4_2 PF08281.12 gi|156937576|ref|YP_001435372.1| - 0.15 11.7 0.1 0.27 10.9 0.1 1.3 1 0 0 1 1 1 0 Sigma-70, region 4 NAD_binding_3 PF03447.16 gi|156937579|ref|YP_001435375.1| - 4.1e-05 24.2 1.5 7.4e-05 23.4 1.5 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain DUF108 PF01958.18 gi|156937579|ref|YP_001435375.1| - 0.00094 19.5 0.0 0.0019 18.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function DUF108 DUF416 PF04222.12 gi|156937579|ref|YP_001435375.1| - 0.089 12.2 0.0 0.3 10.5 0.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF416) ABATE PF07336.11 gi|156937579|ref|YP_001435375.1| - 0.14 12.9 0.0 0.29 11.8 0.0 1.4 1 0 0 1 1 1 0 Putative stress-induced transcription regulator Diphthami_syn_2 PF01902.17 gi|156937580|ref|YP_001435376.1| - 1.3e-46 158.8 0.0 1.5e-46 158.6 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|156937580|ref|YP_001435376.1| - 0.16 11.5 0.0 0.31 10.5 0.0 1.5 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC DAHP_snth_FXD PF18152.1 gi|156937580|ref|YP_001435376.1| - 0.18 11.7 0.0 0.41 10.5 0.0 1.6 1 0 0 1 1 1 0 DAHP synthase ferredoxin-like domain SIS PF01380.22 gi|156937581|ref|YP_001435377.1| - 5.9e-19 68.2 0.0 1.4e-18 67.0 0.0 1.5 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|156937581|ref|YP_001435377.1| - 1.2e-09 38.3 3.6 1.3e-07 31.7 1.2 2.3 1 1 1 2 2 2 2 SIS domain PRMT5 PF05185.16 gi|156937581|ref|YP_001435377.1| - 0.01 15.7 1.3 0.81 9.5 0.0 2.3 1 1 1 2 2 2 0 PRMT5 arginine-N-methyltransferase AlaDh_PNT_C PF01262.21 gi|156937581|ref|YP_001435377.1| - 0.017 14.4 4.7 0.06 12.6 0.0 2.1 1 1 1 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Usp PF00582.26 gi|156937581|ref|YP_001435377.1| - 0.029 14.9 0.1 0.073 13.6 0.0 1.7 2 0 0 2 2 2 0 Universal stress protein family YjeF_N PF03853.15 gi|156937581|ref|YP_001435377.1| - 0.17 11.7 0.8 2.8 7.8 1.3 2.0 1 1 1 2 2 2 0 YjeF-related protein N-terminus Radical_SAM PF04055.21 gi|156937582|ref|YP_001435378.1| - 2.9e-15 57.0 0.1 1.6e-13 51.4 0.0 2.1 1 1 1 2 2 2 2 Radical SAM superfamily DUF1848 PF08902.11 gi|156937582|ref|YP_001435378.1| - 5.4e-08 32.9 0.2 0.007 16.1 0.0 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF1848) THUMP PF02926.17 gi|156937582|ref|YP_001435378.1| - 0.093 12.8 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 THUMP domain Oxidored_nitro PF00148.19 gi|156937582|ref|YP_001435378.1| - 0.14 10.8 0.0 0.23 10.1 0.0 1.2 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase EMG1 PF03587.14 gi|156937584|ref|YP_001435380.1| - 6.3e-43 146.7 0.0 7e-43 146.5 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Asp-B-Hydro_N PF05279.11 gi|156937585|ref|YP_001435381.1| - 0.23 11.5 1.7 0.29 11.2 1.7 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region Ribosomal_L37ae PF01780.19 gi|156937586|ref|YP_001435382.1| - 8.2e-29 99.5 3.6 9.2e-29 99.4 3.6 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|156937586|ref|YP_001435382.1| - 6e-05 22.9 4.4 9.5e-05 22.3 4.1 1.5 1 1 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|156937586|ref|YP_001435382.1| - 0.00054 19.8 0.2 0.00073 19.4 0.2 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sgf11 PF08209.11 gi|156937586|ref|YP_001435382.1| - 0.0023 17.5 1.7 3.7 7.2 0.0 3.2 3 0 0 3 3 3 2 Sgf11 (transcriptional regulation protein) DUF4379 PF14311.6 gi|156937586|ref|YP_001435382.1| - 0.0027 18.0 2.5 0.97 9.8 0.1 2.3 2 0 0 2 2 2 2 Probable Zinc-ribbon domain zf-C2H2 PF00096.26 gi|156937586|ref|YP_001435382.1| - 0.012 16.1 2.6 1.9 9.1 0.1 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-ISL3 PF14690.6 gi|156937586|ref|YP_001435382.1| - 0.013 16.2 1.3 0.25 12.1 0.3 2.3 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 HalOD2 PF18547.1 gi|156937586|ref|YP_001435382.1| - 0.019 14.9 0.3 0.019 14.9 0.3 2.2 1 1 1 2 2 2 0 Halobacterial output domain 2 CpXC PF14353.6 gi|156937586|ref|YP_001435382.1| - 0.02 15.0 0.5 0.56 10.3 0.0 2.0 1 1 1 2 2 2 0 CpXC protein Zn-ribbon_8 PF09723.10 gi|156937586|ref|YP_001435382.1| - 0.02 15.0 0.1 5 7.3 0.0 2.2 2 0 0 2 2 2 0 Zinc ribbon domain zf-C2HC_2 PF13913.6 gi|156937586|ref|YP_001435382.1| - 0.027 14.4 3.6 1.1 9.2 0.1 2.3 2 0 0 2 2 2 0 zinc-finger of a C2HC-type zf-RING_7 PF02591.15 gi|156937586|ref|YP_001435382.1| - 0.033 14.4 0.3 3.7 7.8 0.0 2.2 2 0 0 2 2 2 0 C4-type zinc ribbon domain zf-CHCC PF10276.9 gi|156937586|ref|YP_001435382.1| - 0.05 13.7 1.7 0.17 12.0 0.2 2.1 2 0 0 2 2 2 0 Zinc-finger domain DUF5351 PF17302.2 gi|156937586|ref|YP_001435382.1| - 0.051 13.8 1.7 0.094 12.9 1.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5351) DUF2318 PF10080.9 gi|156937586|ref|YP_001435382.1| - 0.09 12.9 0.1 0.11 12.6 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2318) zf-H2C2_2 PF13465.6 gi|156937586|ref|YP_001435382.1| - 0.11 12.9 5.5 3.3 8.3 1.2 2.2 1 1 1 2 2 2 0 Zinc-finger double domain zf-C2H2_4 PF13894.6 gi|156937586|ref|YP_001435382.1| - 0.19 12.7 3.0 5.1 8.2 0.1 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger TF_Zn_Ribbon PF08271.12 gi|156937586|ref|YP_001435382.1| - 0.2 11.2 1.8 0.46 10.0 1.8 1.6 1 1 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|156937586|ref|YP_001435382.1| - 0.39 10.5 5.9 2.7 7.8 0.4 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-tcix PF14952.6 gi|156937586|ref|YP_001435382.1| - 0.56 9.9 4.6 2.6 7.7 0.1 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DUF35_N PF12172.8 gi|156937586|ref|YP_001435382.1| - 0.73 9.8 4.8 7.5 6.5 0.2 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf-ribbon_3 PF13248.6 gi|156937586|ref|YP_001435382.1| - 1 8.8 5.5 1.1 8.7 1.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Pcc1 PF09341.10 gi|156937588|ref|YP_001435384.1| - 1.5e-07 31.4 0.0 1.7e-07 31.3 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 ATP_bind_1 PF03029.17 gi|156937589|ref|YP_001435385.1| - 1.8e-50 172.0 0.0 2.1e-50 171.8 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein RsgA_GTPase PF03193.16 gi|156937589|ref|YP_001435385.1| - 4.5e-06 26.7 0.7 0.21 11.5 0.1 3.4 4 0 0 4 4 4 2 RsgA GTPase GTP_EFTU PF00009.27 gi|156937589|ref|YP_001435385.1| - 5.4e-05 22.8 0.0 0.00013 21.6 0.0 1.6 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_16 PF13191.6 gi|156937589|ref|YP_001435385.1| - 0.00021 21.7 0.0 0.00041 20.8 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain cobW PF02492.19 gi|156937589|ref|YP_001435385.1| - 0.00039 20.1 0.0 0.76 9.3 0.0 2.2 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|156937589|ref|YP_001435385.1| - 0.00056 19.0 0.3 0.021 13.8 0.0 2.3 2 1 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|156937589|ref|YP_001435385.1| - 0.00069 19.7 0.0 0.22 11.6 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase CbiA PF01656.23 gi|156937589|ref|YP_001435385.1| - 0.00079 19.5 0.0 0.0013 18.8 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Gtr1_RagA PF04670.12 gi|156937589|ref|YP_001435385.1| - 0.0023 17.4 0.2 0.0075 15.6 0.2 1.8 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region SRP54 PF00448.22 gi|156937589|ref|YP_001435385.1| - 0.0045 16.6 0.0 0.4 10.3 0.0 2.6 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain MMR_HSR1_Xtn PF16897.5 gi|156937589|ref|YP_001435385.1| - 0.0056 16.7 0.2 0.27 11.3 0.2 2.4 1 1 1 2 2 2 1 C-terminal region of MMR_HSR1 domain AAA_22 PF13401.6 gi|156937589|ref|YP_001435385.1| - 0.034 14.4 0.1 0.59 10.4 0.1 2.3 1 1 0 1 1 1 0 AAA domain TM1506 PF08973.10 gi|156937589|ref|YP_001435385.1| - 0.075 12.7 0.1 0.2 11.3 0.1 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF1893) NitrOD5 PF11537.8 gi|156937589|ref|YP_001435385.1| - 0.078 13.1 0.1 1.4 9.1 0.0 2.3 2 0 0 2 2 2 0 Nitrosopumilus output domain 5 AAA_31 PF13614.6 gi|156937589|ref|YP_001435385.1| - 0.083 12.8 0.0 14 5.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|156937589|ref|YP_001435385.1| - 0.13 12.2 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 NACHT domain DUF2813 PF11398.8 gi|156937589|ref|YP_001435385.1| - 0.15 11.3 0.1 0.15 11.3 0.1 1.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) Peptidase_M48 PF01435.18 gi|156937592|ref|YP_001435388.1| - 4.4e-39 134.3 0.0 7.3e-39 133.6 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|156937592|ref|YP_001435388.1| - 0.00048 19.4 0.0 0.00085 18.6 0.0 1.3 1 0 0 1 1 1 1 BlaR1 peptidase M56 DUF2892 PF11127.8 gi|156937592|ref|YP_001435388.1| - 0.025 14.6 2.8 0.025 14.6 2.8 2.9 3 1 0 3 3 3 0 Protein of unknown function (DUF2892) DUF2244 PF10003.9 gi|156937592|ref|YP_001435388.1| - 9.9 5.8 9.6 7.8 6.2 3.5 2.9 3 1 0 3 3 3 0 Integral membrane protein (DUF2244) MFS_1 PF07690.16 gi|156937593|ref|YP_001435389.1| - 1.1e-09 37.7 21.2 1.1e-09 37.7 21.2 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily HisKA_4TM PF16926.5 gi|156937593|ref|YP_001435389.1| - 0.32 10.6 5.4 1.3 8.6 0.4 2.6 2 0 0 2 2 2 0 Archaeal 4TM region of histidine kinase Fer4_11 PF13247.6 gi|156937594|ref|YP_001435390.1| - 9.9e-25 86.6 10.9 9.9e-25 86.6 10.9 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156937594|ref|YP_001435390.1| - 5.9e-21 74.8 0.0 1.5e-08 35.1 0.0 3.3 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156937594|ref|YP_001435390.1| - 3.5e-13 49.4 24.5 9.9e-07 28.8 8.5 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156937594|ref|YP_001435390.1| - 1.7e-11 43.4 34.2 7.2e-05 22.6 2.3 4.3 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4 PF00037.27 gi|156937594|ref|YP_001435390.1| - 2.6e-11 42.8 42.0 7.2e-07 28.8 4.4 5.4 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_6 PF12837.7 gi|156937594|ref|YP_001435390.1| - 1.1e-10 41.1 39.6 4.1e-06 26.6 4.4 4.9 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|156937594|ref|YP_001435390.1| - 1.3e-09 38.1 25.2 0.00037 20.6 8.5 3.5 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156937594|ref|YP_001435390.1| - 1e-06 29.1 23.2 0.0014 19.0 5.2 3.8 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156937594|ref|YP_001435390.1| - 2.1e-06 28.3 44.0 0.012 16.5 1.9 4.2 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156937594|ref|YP_001435390.1| - 6.3e-06 26.3 32.4 0.0049 17.3 2.0 4.5 4 1 0 4 4 4 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|156937594|ref|YP_001435390.1| - 4.5e-05 24.3 25.5 0.51 11.3 4.4 4.5 4 0 0 4 4 4 3 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|156937594|ref|YP_001435390.1| - 0.00017 21.7 28.2 0.079 13.1 2.4 4.2 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156937594|ref|YP_001435390.1| - 0.002 18.8 6.0 0.067 13.9 3.2 3.9 4 1 0 4 4 4 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|156937594|ref|YP_001435390.1| - 0.0022 18.5 25.0 0.048 14.2 0.2 4.5 2 1 3 5 5 5 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|156937594|ref|YP_001435390.1| - 0.16 12.8 1.4 0.16 12.8 1.4 3.7 3 1 2 5 5 4 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|156937594|ref|YP_001435390.1| - 0.57 10.0 20.3 3.1 7.6 0.0 4.2 2 1 2 4 4 4 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Molybdopterin PF00384.22 gi|156937595|ref|YP_001435391.1| - 7.2e-31 107.6 0.0 7.1e-30 104.3 0.0 2.2 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molybdop_Fe4S4 PF04879.16 gi|156937595|ref|YP_001435391.1| - 1.3e-10 41.1 0.9 2.9e-10 40.0 0.9 1.6 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain Molydop_binding PF01568.21 gi|156937595|ref|YP_001435391.1| - 4e-07 30.0 0.0 9.3e-07 28.9 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain NrfD PF03916.14 gi|156937596|ref|YP_001435392.1| - 1e-06 28.6 14.1 1e-06 28.6 14.1 2.9 2 1 2 4 4 4 1 Polysulphide reductase, NrfD FMN_dh PF01070.18 gi|156937597|ref|YP_001435393.1| - 1e-18 67.5 1.9 5.3e-15 55.3 0.6 2.1 1 1 1 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|156937597|ref|YP_001435393.1| - 0.00072 18.6 0.7 0.00072 18.6 0.7 2.2 2 1 0 2 2 2 1 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|156937597|ref|YP_001435393.1| - 0.024 13.8 0.9 0.044 12.9 0.9 1.6 1 1 0 1 1 1 0 Conserved region in glutamate synthase DUF374 PF04028.13 gi|156937597|ref|YP_001435393.1| - 0.093 12.3 0.1 0.68 9.5 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF374) IGPD PF00475.18 gi|156937598|ref|YP_001435394.1| - 7.4e-48 162.5 0.5 8.8e-48 162.3 0.5 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase tRNA-synt_His PF13393.6 gi|156937598|ref|YP_001435394.1| - 0.061 12.6 0.0 0.078 12.2 0.0 1.1 1 0 0 1 1 1 0 Histidyl-tRNA synthetase DUF2341 PF10102.9 gi|156937599|ref|YP_001435395.1| - 1.9e-27 95.7 5.4 1.3e-14 54.5 0.3 3.1 3 1 0 3 3 3 2 Domain of unknown function (DUF2341) DUF5412 PF17428.2 gi|156937599|ref|YP_001435395.1| - 0.0015 18.3 0.1 1.2 9.0 0.2 2.6 2 0 0 2 2 2 2 Family of unknown function (DUF5412) PQQ_3 PF13570.6 gi|156937601|ref|YP_001435397.1| - 0.00095 19.6 0.3 6.1 7.5 0.0 4.0 3 0 0 3 3 3 2 PQQ-like domain ANAPC4_WD40 PF12894.7 gi|156937601|ref|YP_001435397.1| - 0.001 19.3 0.0 1.6 9.1 0.0 3.3 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain LVIVD PF08309.11 gi|156937601|ref|YP_001435397.1| - 0.0024 17.1 12.5 0.033 13.5 0.1 4.3 4 0 0 4 4 4 2 LVIVD repeat PAP_fibrillin PF04755.12 gi|156937603|ref|YP_001435399.1| - 4.5 7.2 6.5 4.4 7.2 2.9 2.2 1 1 1 2 2 2 0 PAP_fibrillin Tmpp129 PF10272.9 gi|156937604|ref|YP_001435400.1| - 0.17 11.2 3.9 0.19 11.0 3.9 1.0 1 0 0 1 1 1 0 Putative transmembrane protein precursor HTH_9 PF08221.11 gi|156937604|ref|YP_001435400.1| - 0.5 10.5 4.3 0.89 9.7 4.3 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Fer4_7 PF12838.7 gi|156937605|ref|YP_001435401.1| - 2.5e-16 60.0 33.8 1.7e-09 38.1 12.4 2.0 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156937605|ref|YP_001435401.1| - 3e-14 52.2 15.0 9.5e-08 31.5 4.2 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|156937605|ref|YP_001435401.1| - 9.3e-13 48.1 18.9 2e-10 40.6 9.2 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156937605|ref|YP_001435401.1| - 4.9e-12 45.8 22.0 2e-09 37.4 11.0 1.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937605|ref|YP_001435401.1| - 4.1e-11 42.4 15.1 4.6e-06 26.5 4.3 2.1 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156937605|ref|YP_001435401.1| - 1.5e-09 37.8 14.4 1.4e-08 34.7 14.4 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156937605|ref|YP_001435401.1| - 2.4e-09 36.7 13.7 0.00018 21.4 2.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|156937605|ref|YP_001435401.1| - 1.4e-08 35.5 9.3 0.00097 20.0 3.3 2.1 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|156937605|ref|YP_001435401.1| - 1.8e-07 31.1 13.2 0.0021 18.4 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|156937605|ref|YP_001435401.1| - 4.2e-07 30.4 15.1 2.9e-06 27.7 15.1 2.4 1 1 0 1 1 1 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|156937605|ref|YP_001435401.1| - 8.8e-06 26.3 17.1 0.0041 18.0 4.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|156937605|ref|YP_001435401.1| - 1.2e-05 25.6 23.6 0.00029 21.2 11.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|156937605|ref|YP_001435401.1| - 3.4e-05 24.6 7.1 0.048 14.5 1.4 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156937605|ref|YP_001435401.1| - 5.6e-05 23.8 13.1 0.004 17.8 2.1 2.3 1 1 1 2 2 2 2 4Fe-4S single cluster domain Fer4_17 PF13534.6 gi|156937605|ref|YP_001435401.1| - 0.00082 19.9 13.7 0.16 12.6 2.7 2.1 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|156937605|ref|YP_001435401.1| - 0.0053 16.9 14.0 0.11 12.8 3.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|156937605|ref|YP_001435401.1| - 0.015 15.4 5.3 0.037 14.2 5.3 1.6 1 1 0 1 1 1 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S GCM PF03615.15 gi|156937605|ref|YP_001435401.1| - 0.13 12.1 5.2 1.9 8.4 0.7 2.1 2 0 0 2 2 2 0 GCM motif protein Prefoldin_2 PF01920.20 gi|156937606|ref|YP_001435402.1| - 6.7e-22 77.5 20.1 7.4e-22 77.3 20.1 1.0 1 0 0 1 1 1 1 Prefoldin subunit FlaC_arch PF05377.11 gi|156937606|ref|YP_001435402.1| - 0.0048 17.3 4.7 0.0048 17.3 4.7 2.5 2 1 0 2 2 2 1 Flagella accessory protein C (FlaC) DUF3825 PF12873.7 gi|156937606|ref|YP_001435402.1| - 0.022 14.2 0.1 0.026 14.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3825) Occludin_ELL PF07303.13 gi|156937606|ref|YP_001435402.1| - 0.064 14.0 10.3 0.032 15.0 7.7 1.7 1 1 0 1 1 1 0 Occludin homology domain Spc7 PF08317.11 gi|156937606|ref|YP_001435402.1| - 0.47 9.3 18.0 1.1 8.1 18.0 1.5 1 1 0 1 1 1 0 Spc7 kinetochore protein PspA_IM30 PF04012.12 gi|156937606|ref|YP_001435402.1| - 0.49 9.9 15.8 2.9 7.4 15.8 1.8 1 1 0 1 1 1 0 PspA/IM30 family YlqD PF11068.8 gi|156937606|ref|YP_001435402.1| - 0.51 10.7 19.3 2.8 8.3 10.8 2.2 1 1 1 2 2 2 0 YlqD protein FTA4 PF13093.6 gi|156937606|ref|YP_001435402.1| - 0.63 9.9 10.2 0.83 9.5 10.2 1.1 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Prefoldin PF02996.17 gi|156937606|ref|YP_001435402.1| - 0.77 9.7 14.1 1.9 8.4 3.0 2.5 2 1 0 2 2 2 0 Prefoldin subunit eIF3_N PF09440.10 gi|156937606|ref|YP_001435402.1| - 1.3 9.5 10.5 1.3 9.5 2.1 2.0 1 1 1 2 2 2 0 eIF3 subunit 6 N terminal domain CK2S PF15011.6 gi|156937606|ref|YP_001435402.1| - 1.4 8.8 12.1 0.25 11.2 3.9 2.1 1 1 1 2 2 2 0 Casein Kinase 2 substrate ZapB PF06005.12 gi|156937606|ref|YP_001435402.1| - 1.5 9.3 19.1 0.31 11.5 1.6 2.2 2 0 0 2 2 2 0 Cell division protein ZapB DUF740 PF05340.12 gi|156937606|ref|YP_001435402.1| - 1.7 7.3 2.8 2 7.1 2.8 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF740) SpoIISA_toxin PF14171.6 gi|156937606|ref|YP_001435402.1| - 2 8.0 6.2 2.7 7.6 6.2 1.1 1 0 0 1 1 1 0 Toxin SpoIISA, type II toxin-antitoxin system 5_3_exonuc PF01367.20 gi|156937606|ref|YP_001435402.1| - 2.1 9.0 8.8 11 6.7 8.8 1.9 1 1 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold DivIC PF04977.15 gi|156937606|ref|YP_001435402.1| - 2.1 8.2 20.4 0.92 9.3 8.0 2.2 2 0 0 2 2 2 0 Septum formation initiator GARP PF16731.5 gi|156937606|ref|YP_001435402.1| - 2.3 7.9 9.9 0.29 10.8 3.9 2.0 2 0 0 2 2 2 0 Glutamic acid/alanine-rich protein of Trypanosoma Syntaxin-6_N PF09177.11 gi|156937606|ref|YP_001435402.1| - 2.8 8.6 8.0 59 4.3 8.0 2.3 1 1 0 1 1 1 0 Syntaxin 6, N-terminal Sas10_Utp3 PF04000.15 gi|156937606|ref|YP_001435402.1| - 2.9 8.6 11.3 42 4.9 7.4 3.0 1 1 1 2 2 2 0 Sas10/Utp3/C1D family YojJ PF10372.9 gi|156937606|ref|YP_001435402.1| - 3.7 7.7 9.4 5.3 7.2 2.4 2.2 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus YabA PF06156.13 gi|156937606|ref|YP_001435402.1| - 4.2 8.1 13.7 4.2 8.1 5.0 2.1 1 1 1 2 2 2 0 Initiation control protein YabA DUF1640 PF07798.11 gi|156937606|ref|YP_001435402.1| - 4.3 7.4 13.4 12 5.8 13.4 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1640) Fmp27_WPPW PF10359.9 gi|156937606|ref|YP_001435402.1| - 4.4 6.1 7.4 7.8 5.2 7.4 1.4 1 1 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain DUF2408 PF10303.9 gi|156937606|ref|YP_001435402.1| - 5.6 7.5 11.2 29 5.2 11.2 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF2408) HDV_ag PF01517.18 gi|156937606|ref|YP_001435402.1| - 7.3 6.3 9.0 0.82 9.4 0.9 1.9 1 1 1 2 2 2 0 Hepatitis delta virus delta antigen DUF4510 PF14971.6 gi|156937606|ref|YP_001435402.1| - 7.3 6.9 9.1 3.1 8.1 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4510) Nas2_N PF18265.1 gi|156937606|ref|YP_001435402.1| - 7.9 6.5 10.4 1.6 8.7 0.7 2.9 2 1 1 3 3 3 0 Nas2 N_terminal domain Fib_alpha PF08702.10 gi|156937606|ref|YP_001435402.1| - 8.9 6.5 8.8 16 5.7 1.0 2.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family JMY PF15871.5 gi|156937606|ref|YP_001435402.1| - 9 5.5 17.2 17 4.6 17.2 1.4 1 1 0 1 1 1 0 Junction-mediating and -regulatory protein DHHA1 PF02272.19 gi|156937607|ref|YP_001435403.1| - 2.7e-12 47.3 0.2 1.2e-11 45.2 0.1 1.9 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|156937607|ref|YP_001435403.1| - 2e-11 44.0 0.0 3e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 DHH family FliG_M PF14841.6 gi|156937607|ref|YP_001435403.1| - 0.0032 17.7 1.0 1.9 8.7 0.0 3.2 3 0 0 3 3 3 2 FliG middle domain Glyco_tranf_2_3 PF13641.6 gi|156937608|ref|YP_001435404.1| - 8.6e-21 74.9 0.0 2.7e-20 73.3 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|156937608|ref|YP_001435404.1| - 2.9e-17 63.3 0.0 5.2e-17 62.4 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 gi|156937608|ref|YP_001435404.1| - 1.3e-12 47.9 0.0 2.3e-12 47.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|156937608|ref|YP_001435404.1| - 3.6e-06 26.6 0.0 1.7e-05 24.4 0.0 2.1 1 1 0 1 1 1 1 Glycosyl transferase family 21 baeRF_family2 PF18844.1 gi|156937608|ref|YP_001435404.1| - 0.076 13.1 0.3 0.15 12.2 0.3 1.4 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 2 CLP1_P PF16575.5 gi|156937608|ref|YP_001435404.1| - 0.18 11.6 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop TGT PF01702.18 gi|156937610|ref|YP_001435406.1| - 2.5e-10 40.1 0.0 3.7e-10 39.5 0.0 1.2 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase UPF0020 PF01170.18 gi|156937611|ref|YP_001435407.1| - 2.3e-41 141.7 0.0 2.3e-40 138.4 0.0 2.0 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 gi|156937611|ref|YP_001435407.1| - 5.8e-09 36.2 0.1 1.4e-08 35.0 0.1 1.7 1 0 0 1 1 1 1 THUMP domain MTS PF05175.14 gi|156937611|ref|YP_001435407.1| - 4.6e-05 23.0 0.0 7e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|156937611|ref|YP_001435407.1| - 0.00021 21.1 0.0 0.0003 20.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Eco57I PF07669.11 gi|156937611|ref|YP_001435407.1| - 0.0064 17.0 0.0 0.012 16.1 0.0 1.4 1 0 0 1 1 1 1 Eco57I restriction-modification methylase Cons_hypoth95 PF03602.15 gi|156937611|ref|YP_001435407.1| - 0.0096 15.6 0.0 0.019 14.6 0.0 1.4 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 gi|156937611|ref|YP_001435407.1| - 0.01 15.4 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|156937611|ref|YP_001435407.1| - 0.032 14.9 0.0 0.065 14.0 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain ThiS PF02597.20 gi|156937613|ref|YP_001435409.1| - 1.4e-08 35.3 0.0 1.8e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 ThiS family TACC_C PF05010.14 gi|156937613|ref|YP_001435409.1| - 0.026 14.3 0.2 0.028 14.2 0.2 1.1 1 0 0 1 1 1 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal FAD_binding_2 PF00890.24 gi|156937614|ref|YP_001435410.1| - 0.0081 15.3 0.0 0.011 14.9 0.0 1.1 1 0 0 1 1 1 1 FAD binding domain BtpA PF03437.15 gi|156937615|ref|YP_001435411.1| - 5.5e-76 255.4 0.1 6.2e-76 255.2 0.1 1.0 1 0 0 1 1 1 1 BtpA family Trp_syntA PF00290.20 gi|156937615|ref|YP_001435411.1| - 0.04 12.8 0.3 0.21 10.4 0.1 2.0 2 0 0 2 2 2 0 Tryptophan synthase alpha chain DUF447 PF04289.12 gi|156937617|ref|YP_001435413.1| - 2.9e-06 27.2 0.0 1.2e-05 25.2 0.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF447) PLN_propep PF16485.5 gi|156937617|ref|YP_001435413.1| - 0.081 12.7 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 Protealysin propeptide HypA PF01155.19 gi|156937618|ref|YP_001435414.1| - 1.3e-30 105.7 0.0 1.5e-30 105.5 0.0 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PhnA_Zn_Ribbon PF08274.12 gi|156937618|ref|YP_001435414.1| - 8.6e-05 22.4 2.7 0.13 12.3 0.1 2.3 2 0 0 2 2 2 2 PhnA Zinc-Ribbon TF_Zn_Ribbon PF08271.12 gi|156937618|ref|YP_001435414.1| - 0.0021 17.5 0.4 2.2 7.9 0.0 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding TFIIS_C PF01096.18 gi|156937618|ref|YP_001435414.1| - 0.008 16.0 4.7 0.98 9.3 1.4 2.2 2 0 0 2 2 2 2 Transcription factor S-II (TFIIS) zf-Dof PF02701.15 gi|156937618|ref|YP_001435414.1| - 0.0093 16.1 1.0 4.2 7.6 0.1 2.2 2 0 0 2 2 2 2 Dof domain, zinc finger Zn-ribbon_8 PF09723.10 gi|156937618|ref|YP_001435414.1| - 0.028 14.5 2.8 0.34 11.1 2.8 2.2 1 1 0 1 1 1 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|156937618|ref|YP_001435414.1| - 0.028 14.4 0.2 5.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|156937618|ref|YP_001435414.1| - 0.045 13.5 0.6 4.6 7.1 0.0 2.2 2 0 0 2 2 2 0 A2L zinc ribbon domain zf-RRN7 PF11781.8 gi|156937618|ref|YP_001435414.1| - 0.049 13.3 2.3 0.96 9.2 0.5 2.3 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF1451 PF07295.11 gi|156937618|ref|YP_001435414.1| - 0.067 13.2 0.1 1.3 9.0 0.0 2.2 2 0 0 2 2 2 0 Zinc-ribbon containing domain zinc_ribbon_4 PF13717.6 gi|156937618|ref|YP_001435414.1| - 0.1 12.5 2.9 2.9 7.9 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-TFIIB PF13453.6 gi|156937618|ref|YP_001435414.1| - 0.11 11.9 0.4 0.45 9.9 0.1 2.1 2 0 0 2 2 2 0 Transcription factor zinc-finger OrfB_Zn_ribbon PF07282.11 gi|156937618|ref|YP_001435414.1| - 0.12 12.3 0.0 3.6 7.6 0.0 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Elf1 PF05129.13 gi|156937618|ref|YP_001435414.1| - 0.14 12.2 2.0 3.6 7.7 0.1 2.2 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zf_UBZ PF18439.1 gi|156937618|ref|YP_001435414.1| - 0.19 11.4 2.4 3.7 7.2 0.2 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-trcl PF13451.6 gi|156937618|ref|YP_001435414.1| - 0.31 11.0 2.5 2 8.4 0.7 2.1 2 0 0 2 2 2 0 Probable zinc-ribbon domain zf-H2C2_2 PF13465.6 gi|156937618|ref|YP_001435414.1| - 0.71 10.4 0.3 0.71 10.4 0.3 2.1 2 0 0 2 2 2 0 Zinc-finger double domain Rubredoxin_2 PF18073.1 gi|156937618|ref|YP_001435414.1| - 3 7.7 6.5 4.1 7.2 0.5 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Radical_SAM PF04055.21 gi|156937619|ref|YP_001435415.1| - 1.2e-17 64.7 0.0 3.1e-17 63.4 0.0 1.7 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|156937619|ref|YP_001435415.1| - 3.1e-06 27.3 0.2 2.1e-05 24.6 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|156937619|ref|YP_001435415.1| - 1.8e-05 25.0 0.1 6.8e-05 23.2 0.1 1.9 1 1 0 1 1 1 1 4Fe-4S single cluster domain NolX PF05819.11 gi|156937620|ref|YP_001435416.1| - 0.33 10.3 0.4 0.44 9.8 0.4 1.1 1 0 0 1 1 1 0 NolX protein Hemopexin PF00045.19 gi|156937620|ref|YP_001435416.1| - 1.9 8.5 7.0 6.3 6.8 4.0 2.8 3 1 0 3 3 3 0 Hemopexin HTH_12 PF08461.10 gi|156937621|ref|YP_001435417.1| - 0.00086 19.2 0.1 0.0012 18.7 0.1 1.3 1 0 0 1 1 1 1 Ribonuclease R winged-helix domain Zn-ribbon_8 PF09723.10 gi|156937621|ref|YP_001435417.1| - 0.0021 18.1 0.7 0.0039 17.3 0.7 1.4 1 0 0 1 1 1 1 Zinc ribbon domain DZR PF12773.7 gi|156937621|ref|YP_001435417.1| - 0.0046 16.9 0.4 0.0066 16.5 0.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon HTH_11 PF08279.12 gi|156937621|ref|YP_001435417.1| - 0.0072 16.2 0.1 0.01 15.8 0.1 1.2 1 0 0 1 1 1 1 HTH domain TF_Zn_Ribbon PF08271.12 gi|156937621|ref|YP_001435417.1| - 0.011 15.3 0.5 1.8 8.2 0.0 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding HypA PF01155.19 gi|156937621|ref|YP_001435417.1| - 0.022 14.8 1.6 0.031 14.3 1.6 1.3 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|156937621|ref|YP_001435417.1| - 0.035 14.0 0.8 0.054 13.4 0.8 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain C1_1 PF00130.22 gi|156937621|ref|YP_001435417.1| - 0.092 12.6 2.4 0.21 11.5 2.4 1.5 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) HTH_5 PF01022.20 gi|156937621|ref|YP_001435417.1| - 0.12 12.2 0.1 0.22 11.4 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family tRNA-synt_1g PF09334.11 gi|156937621|ref|YP_001435417.1| - 0.15 10.8 0.1 0.15 10.8 0.1 1.1 1 0 0 1 1 1 0 tRNA synthetases class I (M) zinc_ribbon_4 PF13717.6 gi|156937621|ref|YP_001435417.1| - 0.45 10.5 4.9 9.8 6.2 0.4 2.5 2 0 0 2 2 2 0 zinc-ribbon domain HalOD2 PF18547.1 gi|156937621|ref|YP_001435417.1| - 0.81 9.6 3.4 4.2 7.4 1.3 2.1 2 0 0 2 2 2 0 Halobacterial output domain 2 FYDLN_acid PF09538.10 gi|156937621|ref|YP_001435417.1| - 1.4 9.7 3.5 4.3 8.1 2.6 1.9 1 1 1 2 2 2 0 Protein of unknown function (FYDLN_acid) zf_UBZ PF18439.1 gi|156937621|ref|YP_001435417.1| - 1.5 8.5 3.5 29 4.4 0.3 2.7 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger CitMHS PF03600.16 gi|156937622|ref|YP_001435418.1| - 6.5e-43 147.0 23.9 2.5e-42 145.1 23.4 1.9 1 1 1 2 2 2 2 Citrate transporter ArsB PF02040.15 gi|156937622|ref|YP_001435418.1| - 2.5e-16 60.0 18.7 3.3e-16 59.6 18.7 1.0 1 0 0 1 1 1 1 Arsenical pump membrane protein Helicase_PWI PF18149.1 gi|156937623|ref|YP_001435419.1| - 0.15 12.3 0.0 0.48 10.6 0.0 1.8 2 0 0 2 2 2 0 N-terminal helicase PWI domain CBS PF00571.28 gi|156937624|ref|YP_001435420.1| - 2.1e-05 24.9 0.1 0.061 13.8 0.0 3.8 4 1 0 4 4 4 2 CBS domain Creatininase PF02633.14 gi|156937625|ref|YP_001435421.1| - 1.3e-21 77.1 0.0 3.9e-21 75.6 0.0 1.6 1 1 0 1 1 1 1 Creatinine amidohydrolase DUF5417 PF17438.2 gi|156937626|ref|YP_001435422.1| - 0.022 15.0 0.1 0.8 10.0 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5417) UPF0113 PF03657.13 gi|156937628|ref|YP_001435424.1| - 1.5e-09 38.0 0.0 2.3e-09 37.4 0.0 1.2 1 0 0 1 1 1 1 UPF0113 PUA domain Methyltranf_PUA PF13636.6 gi|156937628|ref|YP_001435424.1| - 0.0057 16.6 0.3 0.0094 15.9 0.3 1.5 1 1 0 1 1 1 1 RNA-binding PUA-like domain of methyltransferase RsmF Translin PF01997.16 gi|156937629|ref|YP_001435425.1| - 7e-12 45.8 5.8 8.5e-11 42.2 5.8 2.4 1 1 0 1 1 1 1 Translin family Flagellar_rod PF05149.12 gi|156937629|ref|YP_001435425.1| - 0.023 14.2 4.2 2.4 7.6 0.8 2.9 2 1 0 2 2 2 0 Paraflagellar rod protein RPN7 PF10602.9 gi|156937629|ref|YP_001435425.1| - 0.054 13.2 1.7 0.1 12.3 1.7 1.5 1 0 0 1 1 1 0 26S proteasome subunit RPN7 FapA PF03961.13 gi|156937629|ref|YP_001435425.1| - 0.072 11.7 2.3 0.099 11.2 2.3 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A LUC7 PF03194.15 gi|156937629|ref|YP_001435425.1| - 0.095 12.3 0.5 0.11 12.1 0.5 1.3 1 0 0 1 1 1 0 LUC7 N_terminus Cep57_MT_bd PF06657.13 gi|156937629|ref|YP_001435425.1| - 0.14 12.6 4.3 0.27 11.7 4.3 1.5 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 DASH_Dad3 PF08656.10 gi|156937629|ref|YP_001435425.1| - 0.16 12.1 2.8 1.2 9.3 1.9 2.3 1 1 1 2 2 2 0 DASH complex subunit Dad3 Cytochrom_B562 PF07361.11 gi|156937629|ref|YP_001435425.1| - 0.2 12.4 3.0 5.3 7.8 0.6 2.9 2 1 0 2 2 2 0 Cytochrome b562 Med9 PF07544.13 gi|156937629|ref|YP_001435425.1| - 0.23 11.6 2.3 0.98 9.5 1.4 2.3 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 GldM_N PF12081.8 gi|156937629|ref|YP_001435425.1| - 0.27 11.3 2.1 0.61 10.2 0.6 2.2 1 1 0 2 2 2 0 GldM N-terminal domain bZIP_1 PF00170.21 gi|156937629|ref|YP_001435425.1| - 1 9.5 6.5 6.8 6.9 1.7 2.8 2 0 0 2 2 2 0 bZIP transcription factor YabA PF06156.13 gi|156937629|ref|YP_001435425.1| - 3.1 8.5 5.1 7.9 7.2 1.5 2.5 1 1 1 2 2 2 0 Initiation control protein YabA DUF2204 PF09970.9 gi|156937630|ref|YP_001435426.1| - 7.7e-72 240.7 0.8 8.7e-72 240.6 0.8 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF2204) NTP_transf_5 PF14907.6 gi|156937630|ref|YP_001435426.1| - 0.029 14.0 0.0 0.057 13.0 0.0 1.4 1 1 0 1 1 1 0 Uncharacterised nucleotidyltransferase B277 PF17623.2 gi|156937630|ref|YP_001435426.1| - 0.068 12.2 0.0 0.095 11.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function Ocnus PF05005.15 gi|156937630|ref|YP_001435426.1| - 0.11 12.6 0.0 21 5.3 0.0 2.2 2 0 0 2 2 2 0 Janus/Ocnus family (Ocnus) Ribosomal_L40e PF01020.17 gi|156937631|ref|YP_001435427.1| - 2.2e-09 37.0 2.8 2.6e-09 36.8 2.8 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DZR PF12773.7 gi|156937631|ref|YP_001435427.1| - 0.012 15.7 0.5 0.013 15.5 0.5 1.2 1 0 0 1 1 1 0 Double zinc ribbon Zn_ribbon_SprT PF17283.2 gi|156937631|ref|YP_001435427.1| - 0.015 15.2 3.6 1.8 8.5 0.3 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain TackOD1 PF18551.1 gi|156937631|ref|YP_001435427.1| - 0.021 14.5 0.2 0.023 14.4 0.2 1.1 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 TF_Zn_Ribbon PF08271.12 gi|156937631|ref|YP_001435427.1| - 0.039 13.5 1.9 4.5 6.9 0.2 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-RanBP PF00641.18 gi|156937631|ref|YP_001435427.1| - 0.051 12.9 4.0 0.07 12.5 4.0 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others HypA PF01155.19 gi|156937631|ref|YP_001435427.1| - 0.051 13.6 0.4 0.057 13.4 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|156937631|ref|YP_001435427.1| - 0.051 13.3 2.1 0.077 12.7 2.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|156937631|ref|YP_001435427.1| - 0.055 13.2 1.7 0.26 11.0 0.1 2.1 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein CpXC PF14353.6 gi|156937631|ref|YP_001435427.1| - 0.066 13.3 0.6 0.12 12.4 0.0 1.6 1 1 1 2 2 2 0 CpXC protein zf-IS66 PF13005.7 gi|156937631|ref|YP_001435427.1| - 0.077 13.4 3.9 0.1 13.0 0.4 2.0 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zf-ACC PF17848.1 gi|156937631|ref|YP_001435427.1| - 0.1 12.7 4.2 5.2 7.2 0.3 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Zn-ribbon_8 PF09723.10 gi|156937631|ref|YP_001435427.1| - 0.12 12.5 2.2 0.31 11.2 2.2 1.7 1 1 0 1 1 1 0 Zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|156937631|ref|YP_001435427.1| - 0.39 10.6 4.6 0.9 9.5 0.1 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit Rubredoxin_2 PF18073.1 gi|156937631|ref|YP_001435427.1| - 0.41 10.4 5.4 1.2 9.0 5.4 1.7 1 1 0 1 1 1 0 Rubredoxin metal binding domain zf-CCHC_2 PF13696.6 gi|156937631|ref|YP_001435427.1| - 3.5 7.5 7.9 7.5 6.5 1.0 2.3 2 0 0 2 2 2 0 Zinc knuckle AsnC_trans_reg2 PF17805.1 gi|156937632|ref|YP_001435428.1| - 5.6e-36 122.6 0.2 5.8e-18 64.8 0.1 3.0 3 0 0 3 3 3 2 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|156937632|ref|YP_001435428.1| - 9.3e-13 47.8 0.0 1.2e-08 34.7 0.0 2.7 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|156937632|ref|YP_001435428.1| - 2.5e-06 26.9 0.1 0.0055 16.2 0.0 2.5 2 0 0 2 2 2 2 Sigma-70, region 4 HTH_24 PF13412.6 gi|156937632|ref|YP_001435428.1| - 9.6e-05 21.9 1.7 0.0024 17.4 0.5 3.2 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding IF2_N PF04760.15 gi|156937632|ref|YP_001435428.1| - 0.011 15.5 0.2 1.9 8.4 0.0 2.8 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region mCpol PF18182.1 gi|156937632|ref|YP_001435428.1| - 0.019 15.3 0.0 0.044 14.1 0.0 1.5 1 0 0 1 1 1 0 minimal CRISPR polymerase domain Sigma70_r3 PF04539.16 gi|156937632|ref|YP_001435428.1| - 0.037 14.1 5.3 0.94 9.6 0.0 2.8 3 0 0 3 3 3 0 Sigma-70 region 3 YqeY PF09424.10 gi|156937632|ref|YP_001435428.1| - 0.056 13.5 0.3 0.14 12.2 0.3 1.7 1 0 0 1 1 1 0 Yqey-like protein HTH_Crp_2 PF13545.6 gi|156937632|ref|YP_001435428.1| - 0.077 13.0 0.0 1.9 8.5 0.0 2.4 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_50 PF18024.1 gi|156937632|ref|YP_001435428.1| - 0.1 12.2 0.0 7.7 6.2 0.0 3.3 2 1 1 3 3 3 0 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|156937632|ref|YP_001435428.1| - 0.17 11.3 0.0 17 4.9 0.0 2.7 3 0 0 3 3 3 0 Helix-turn-helix domain of transposase family ISL3 DUF4777 PF16007.5 gi|156937632|ref|YP_001435428.1| - 2.1 8.6 7.2 1.4 9.2 0.1 3.5 4 0 0 4 4 4 0 Domain of unknown function (DUF4777) DUF2795 PF11387.8 gi|156937633|ref|YP_001435429.1| - 1.7e-19 69.8 0.0 3e-09 36.9 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF2795) DUF4974 PF16344.5 gi|156937633|ref|YP_001435429.1| - 0.0051 16.8 0.0 2.2 8.4 0.0 2.5 2 1 0 2 2 2 2 Domain of unknown function (DUF4974) ABC_ATPase PF09818.9 gi|156937633|ref|YP_001435429.1| - 0.013 14.3 0.0 2.1 7.0 0.0 2.0 1 1 1 2 2 2 0 Predicted ATPase of the ABC class DUF1955 PF09205.10 gi|156937633|ref|YP_001435429.1| - 0.019 14.7 0.1 2 8.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1955) STAT_alpha PF01017.20 gi|156937633|ref|YP_001435429.1| - 0.039 13.9 0.0 6.4 6.6 0.0 2.2 1 1 0 2 2 2 0 STAT protein, all-alpha domain Lip_prot_lig_C PF10437.9 gi|156937633|ref|YP_001435429.1| - 0.067 13.2 0.0 9.5 6.3 0.0 2.5 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus Nre_N PF04894.12 gi|156937634|ref|YP_001435430.1| - 5.4e-74 249.4 0.0 6.5e-74 249.2 0.0 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|156937634|ref|YP_001435430.1| - 2e-15 56.7 0.0 3.8e-15 55.8 0.0 1.4 1 0 0 1 1 1 1 Archaeal Nre, C-terminal SAICAR_synt PF01259.18 gi|156937636|ref|YP_001435432.1| - 3.2e-52 177.6 0.3 4e-52 177.3 0.3 1.0 1 0 0 1 1 1 1 SAICAR synthetase Hydrolase_4 PF12146.8 gi|156937636|ref|YP_001435432.1| - 0.059 12.6 0.0 0.079 12.2 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 PurS PF02700.14 gi|156937637|ref|YP_001435433.1| - 9.2e-19 67.4 0.3 1.1e-18 67.1 0.3 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|156937638|ref|YP_001435434.1| - 1.8e-34 119.0 0.1 1.1e-32 113.2 0.1 2.0 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_3 PF07685.14 gi|156937638|ref|YP_001435434.1| - 2.8e-08 33.6 0.0 4e-08 33.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|156937638|ref|YP_001435434.1| - 2.5e-07 30.6 0.0 3.7e-07 30.1 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|156937638|ref|YP_001435434.1| - 4.7e-07 29.8 0.0 8.3e-07 29.0 0.0 1.6 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|156937638|ref|YP_001435434.1| - 0.0024 17.6 0.0 0.0037 17.1 0.0 1.3 1 0 0 1 1 1 1 Peptidase C26 HTH_38 PF13936.6 gi|156937639|ref|YP_001435435.1| - 1.3e-07 31.2 0.1 4.2e-07 29.6 0.1 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|156937639|ref|YP_001435435.1| - 6.2e-07 29.0 0.0 1.4e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain HTH_40 PF14493.6 gi|156937639|ref|YP_001435435.1| - 2e-06 28.1 5.9 1.2e-05 25.7 5.9 2.3 1 1 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|156937639|ref|YP_001435435.1| - 3.5e-05 23.4 1.7 0.00014 21.5 0.0 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_29 PF13551.6 gi|156937639|ref|YP_001435435.1| - 7.5e-05 22.7 0.0 0.00016 21.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix bZIP_2 PF07716.15 gi|156937639|ref|YP_001435435.1| - 0.00013 22.0 4.8 0.00013 22.0 4.8 2.6 2 1 0 3 3 2 1 Basic region leucine zipper bZIP_1 PF00170.21 gi|156937639|ref|YP_001435435.1| - 0.00017 21.6 19.0 0.00023 21.2 7.8 2.5 1 1 1 2 2 2 1 bZIP transcription factor Wtap PF17098.5 gi|156937639|ref|YP_001435435.1| - 0.00019 21.4 6.1 0.00028 20.9 6.1 1.4 1 0 0 1 1 1 1 WTAP/Mum2p family Cep57_MT_bd PF06657.13 gi|156937639|ref|YP_001435435.1| - 0.00021 21.7 12.2 0.00039 20.8 12.2 1.4 1 0 0 1 1 1 1 Centrosome microtubule-binding domain of Cep57 HTH_28 PF13518.6 gi|156937639|ref|YP_001435435.1| - 0.00024 21.2 0.1 0.00051 20.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain DUF2730 PF10805.8 gi|156937639|ref|YP_001435435.1| - 0.00025 21.1 3.4 0.00048 20.2 3.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) Atg14 PF10186.9 gi|156937639|ref|YP_001435435.1| - 0.00032 19.9 4.5 0.00043 19.5 4.5 1.2 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ABC_tran_CTD PF16326.5 gi|156937639|ref|YP_001435435.1| - 0.0005 20.3 18.6 0.0005 20.3 18.6 1.8 2 0 0 2 2 1 1 ABC transporter C-terminal domain Terminase_5 PF06056.12 gi|156937639|ref|YP_001435435.1| - 0.00057 19.7 0.0 0.0013 18.6 0.0 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) GerE PF00196.19 gi|156937639|ref|YP_001435435.1| - 0.00059 19.3 0.0 0.0013 18.2 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family Sigma70_r4 PF04545.16 gi|156937639|ref|YP_001435435.1| - 0.0007 19.1 4.0 0.0026 17.2 0.0 2.9 3 0 0 3 3 2 1 Sigma-70, region 4 TSC22 PF01166.18 gi|156937639|ref|YP_001435435.1| - 0.001 19.3 2.5 0.001 19.3 2.5 2.6 2 1 1 3 3 2 1 TSC-22/dip/bun family HTH_17 PF12728.7 gi|156937639|ref|YP_001435435.1| - 0.0011 19.2 0.2 0.031 14.5 0.0 2.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|156937639|ref|YP_001435435.1| - 0.0017 18.2 0.0 0.0067 16.3 0.0 2.0 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family UPF0242 PF06785.11 gi|156937639|ref|YP_001435435.1| - 0.0021 18.2 5.5 0.0031 17.6 5.5 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus HTH_11 PF08279.12 gi|156937639|ref|YP_001435435.1| - 0.0023 17.8 2.5 0.0033 17.3 0.0 2.5 3 0 0 3 3 1 1 HTH domain Phage_GP20 PF06810.11 gi|156937639|ref|YP_001435435.1| - 0.0025 17.6 5.1 0.0042 16.9 5.1 1.3 1 0 0 1 1 1 1 Phage minor structural protein GP20 Spc7 PF08317.11 gi|156937639|ref|YP_001435435.1| - 0.0026 16.7 11.4 0.0041 16.0 11.4 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Shugoshin_N PF07558.11 gi|156937639|ref|YP_001435435.1| - 0.0032 17.3 4.0 0.0032 17.3 4.0 2.9 2 1 0 2 2 2 1 Shugoshin N-terminal coiled-coil region Lebercilin PF15619.6 gi|156937639|ref|YP_001435435.1| - 0.0039 16.9 13.3 0.0066 16.1 13.3 1.3 1 0 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease HTH_20 PF12840.7 gi|156937639|ref|YP_001435435.1| - 0.0051 16.8 0.1 0.022 14.8 0.0 2.2 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_7 PF02796.15 gi|156937639|ref|YP_001435435.1| - 0.0064 16.5 0.0 0.018 15.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_Tnp_1 PF01527.20 gi|156937639|ref|YP_001435435.1| - 0.0069 16.7 1.0 0.0069 16.7 1.0 2.7 1 1 1 2 2 2 1 Transposase PKcGMP_CC PF16808.5 gi|156937639|ref|YP_001435435.1| - 0.0084 15.9 8.2 0.0084 15.9 8.2 3.6 3 1 1 4 4 3 1 Coiled-coil N-terminus of cGMP-dependent protein kinase AAA_23 PF13476.6 gi|156937639|ref|YP_001435435.1| - 0.0085 16.6 8.2 0.011 16.2 8.2 1.2 1 0 0 1 1 1 1 AAA domain OmpH PF03938.14 gi|156937639|ref|YP_001435435.1| - 0.0086 16.4 3.7 0.013 15.8 3.7 1.4 1 0 0 1 1 1 1 Outer membrane protein (OmpH-like) YkyA PF10368.9 gi|156937639|ref|YP_001435435.1| - 0.0088 15.7 9.6 0.016 14.9 9.6 1.4 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein ZapB PF06005.12 gi|156937639|ref|YP_001435435.1| - 0.0099 16.3 17.7 0.021 15.3 17.7 1.5 1 0 0 1 1 1 1 Cell division protein ZapB Syntaxin_2 PF14523.6 gi|156937639|ref|YP_001435435.1| - 0.011 16.1 2.8 0.022 15.1 2.8 1.5 1 0 0 1 1 1 0 Syntaxin-like protein ATG16 PF08614.11 gi|156937639|ref|YP_001435435.1| - 0.021 15.1 12.1 0.041 14.1 12.1 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) HTH_24 PF13412.6 gi|156937639|ref|YP_001435435.1| - 0.022 14.3 0.0 0.022 14.3 0.0 3.0 3 1 1 4 4 3 0 Winged helix-turn-helix DNA-binding Tropomyosin_1 PF12718.7 gi|156937639|ref|YP_001435435.1| - 0.022 14.9 14.4 0.026 14.7 13.3 1.6 2 0 0 2 2 1 0 Tropomyosin like TMF_TATA_bd PF12325.8 gi|156937639|ref|YP_001435435.1| - 0.023 14.9 11.3 0.06 13.6 11.3 1.6 1 0 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF812 PF05667.11 gi|156937639|ref|YP_001435435.1| - 0.026 13.4 7.6 0.044 12.7 7.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF812) DUF3489 PF11994.8 gi|156937639|ref|YP_001435435.1| - 0.026 14.6 0.1 0.054 13.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) HemX PF04375.14 gi|156937639|ref|YP_001435435.1| - 0.036 13.4 2.3 0.061 12.6 2.3 1.3 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase GrpE PF01025.19 gi|156937639|ref|YP_001435435.1| - 0.036 13.7 6.8 0.076 12.7 6.8 1.5 1 0 0 1 1 1 0 GrpE FapA PF03961.13 gi|156937639|ref|YP_001435435.1| - 0.036 12.7 7.2 0.046 12.3 7.2 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF4407 PF14362.6 gi|156937639|ref|YP_001435435.1| - 0.036 13.4 0.7 0.051 12.9 0.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) NPV_P10 PF05531.12 gi|156937639|ref|YP_001435435.1| - 0.04 14.4 0.6 0.092 13.2 0.6 1.6 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Bacillus_HBL PF05791.11 gi|156937639|ref|YP_001435435.1| - 0.042 13.7 0.6 0.093 12.5 0.6 1.5 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Cnn_1N PF07989.11 gi|156937639|ref|YP_001435435.1| - 0.042 14.0 16.0 3.3 7.9 16.0 2.5 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 Paralemmin PF03285.15 gi|156937639|ref|YP_001435435.1| - 0.047 13.3 9.7 0.07 12.7 9.7 1.2 1 0 0 1 1 1 0 Paralemmin AAA_13 PF13166.6 gi|156937639|ref|YP_001435435.1| - 0.05 12.2 3.2 0.058 12.0 3.2 1.1 1 0 0 1 1 1 0 AAA domain Ead_Ea22 PF13935.6 gi|156937639|ref|YP_001435435.1| - 0.054 14.1 6.8 0.12 13.0 6.8 1.5 1 0 0 1 1 1 0 Ead/Ea22-like protein Phage_GPO PF05929.11 gi|156937639|ref|YP_001435435.1| - 0.06 13.0 0.4 0.073 12.7 0.4 1.2 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase tRNA-synt_His PF13393.6 gi|156937639|ref|YP_001435435.1| - 0.061 12.6 0.3 0.12 11.6 0.4 1.5 2 0 0 2 2 1 0 Histidyl-tRNA synthetase Fmp27_WPPW PF10359.9 gi|156937639|ref|YP_001435435.1| - 0.088 11.6 6.6 0.11 11.3 6.6 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain YabA PF06156.13 gi|156937639|ref|YP_001435435.1| - 0.095 13.3 5.6 0.25 12.0 5.6 1.7 1 0 0 1 1 1 0 Initiation control protein YabA FemAB PF02388.16 gi|156937639|ref|YP_001435435.1| - 0.11 11.4 5.0 0.16 10.9 5.0 1.1 1 0 0 1 1 1 0 FemAB family HTH_IclR PF09339.10 gi|156937639|ref|YP_001435435.1| - 0.11 12.3 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain Lip_prot_lig_C PF10437.9 gi|156937639|ref|YP_001435435.1| - 0.12 12.4 1.9 3.5 7.7 0.9 2.7 2 1 0 2 2 2 0 Bacterial lipoate protein ligase C-terminus DUF1664 PF07889.12 gi|156937639|ref|YP_001435435.1| - 0.14 12.2 1.6 0.29 11.2 1.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 gi|156937639|ref|YP_001435435.1| - 0.16 12.4 13.1 2.4 8.6 6.7 3.3 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) TolA_bind_tri PF16331.5 gi|156937639|ref|YP_001435435.1| - 0.16 12.1 7.5 0.28 11.3 7.5 1.4 1 0 0 1 1 1 0 TolA binding protein trimerisation GAS PF13851.6 gi|156937639|ref|YP_001435435.1| - 0.16 11.3 13.3 0.32 10.3 13.3 1.4 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding ACCA PF03255.14 gi|156937639|ref|YP_001435435.1| - 0.17 11.8 6.5 0.35 10.8 6.5 1.5 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CCDC106 PF15794.5 gi|156937639|ref|YP_001435435.1| - 0.18 11.5 7.1 0.29 10.8 7.1 1.2 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 106 Prefoldin PF02996.17 gi|156937639|ref|YP_001435435.1| - 0.19 11.7 12.5 0.57 10.1 3.2 2.4 1 1 1 2 2 2 0 Prefoldin subunit DUF16 PF01519.16 gi|156937639|ref|YP_001435435.1| - 0.19 12.3 5.3 0.34 11.4 4.5 1.8 2 0 0 2 2 1 0 Protein of unknown function DUF16 HTH_DeoR PF08220.12 gi|156937639|ref|YP_001435435.1| - 0.24 11.2 1.2 0.4 10.5 0.0 2.0 3 0 0 3 3 1 0 DeoR-like helix-turn-helix domain PilJ PF13675.6 gi|156937639|ref|YP_001435435.1| - 0.24 11.4 2.1 0.68 10.0 1.0 1.9 1 1 1 2 2 2 0 Type IV pili methyl-accepting chemotaxis transducer N-term HAP1_N PF04849.13 gi|156937639|ref|YP_001435435.1| - 0.26 10.4 13.9 0.43 9.7 13.9 1.2 1 0 0 1 1 1 0 HAP1 N-terminal conserved region DUF4349 PF14257.6 gi|156937639|ref|YP_001435435.1| - 0.28 10.6 11.3 0.46 9.9 11.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4349) Ax_dynein_light PF10211.9 gi|156937639|ref|YP_001435435.1| - 0.28 11.1 12.1 0.62 10.0 12.1 1.6 1 1 0 1 1 1 0 Axonemal dynein light chain Swi5 PF07061.11 gi|156937639|ref|YP_001435435.1| - 0.29 11.2 14.0 38 4.5 12.6 2.7 2 1 0 2 2 1 0 Swi5 LRRFIP PF09738.9 gi|156937639|ref|YP_001435435.1| - 0.3 10.5 11.5 0.46 9.9 11.5 1.2 1 0 0 1 1 1 0 LRRFIP family Nnf1 PF03980.14 gi|156937639|ref|YP_001435435.1| - 0.34 11.3 14.7 0.3 11.5 2.8 2.5 1 1 1 2 2 2 0 Nnf1 Erp_C PF06780.11 gi|156937639|ref|YP_001435435.1| - 0.41 10.7 5.9 0.87 9.6 5.9 1.5 1 0 0 1 1 1 0 Erp protein C-terminus PCRF PF03462.18 gi|156937639|ref|YP_001435435.1| - 0.43 10.4 5.0 0.8 9.5 5.0 1.4 1 0 0 1 1 1 0 PCRF domain TMF_DNA_bd PF12329.8 gi|156937639|ref|YP_001435435.1| - 0.47 10.5 21.1 8.2 6.5 21.1 2.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 DNA binding V_ATPase_I PF01496.19 gi|156937639|ref|YP_001435435.1| - 0.47 8.3 1.7 0.53 8.1 1.7 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family DUF4988 PF16378.5 gi|156937639|ref|YP_001435435.1| - 0.51 10.0 6.1 4.4 6.9 0.6 2.3 1 1 1 2 2 2 0 Domain of unknown function Nup54 PF13874.6 gi|156937639|ref|YP_001435435.1| - 0.53 10.4 9.8 9.4 6.3 9.9 2.3 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 TMPIT PF07851.13 gi|156937639|ref|YP_001435435.1| - 0.6 9.3 4.7 0.97 8.6 4.7 1.2 1 0 0 1 1 1 0 TMPIT-like protein MIP-T3_C PF17749.1 gi|156937639|ref|YP_001435435.1| - 0.62 10.0 9.4 3.7 7.5 9.5 2.0 1 1 0 1 1 1 0 Microtubule-binding protein MIP-T3 C-terminal region Cep57_CLD_2 PF14197.6 gi|156937639|ref|YP_001435435.1| - 0.63 10.2 17.7 2.2 8.5 17.7 1.9 1 1 0 1 1 1 0 Centrosome localisation domain of PPC89 CENP-H PF05837.12 gi|156937639|ref|YP_001435435.1| - 0.78 10.2 10.8 1.5 9.3 10.8 1.4 1 0 0 1 1 1 0 Centromere protein H (CENP-H) BLOC1_2 PF10046.9 gi|156937639|ref|YP_001435435.1| - 0.78 10.1 8.3 2.8 8.3 8.3 1.9 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 HalX PF08663.10 gi|156937639|ref|YP_001435435.1| - 0.85 10.0 12.7 0.93 9.9 4.9 2.4 1 1 1 2 2 2 0 HalX domain Fib_alpha PF08702.10 gi|156937639|ref|YP_001435435.1| - 0.86 9.8 6.4 8.6 6.5 0.8 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Seryl_tRNA_N PF02403.22 gi|156937639|ref|YP_001435435.1| - 1 9.6 13.9 1.6 9.0 13.5 1.5 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain DUF4140 PF13600.6 gi|156937639|ref|YP_001435435.1| - 1.1 9.7 12.7 1.4 9.4 3.5 2.6 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Baculo_F PF12259.8 gi|156937639|ref|YP_001435435.1| - 1.1 7.6 3.9 1.6 7.2 3.9 1.1 1 0 0 1 1 1 0 Baculovirus F protein Fzo_mitofusin PF04799.13 gi|156937639|ref|YP_001435435.1| - 1.6 8.2 5.5 3.2 7.3 5.5 1.5 1 0 0 1 1 1 0 fzo-like conserved region DivIC PF04977.15 gi|156937639|ref|YP_001435435.1| - 1.7 8.5 20.0 0.047 13.5 6.3 3.0 2 1 1 3 3 2 0 Septum formation initiator Tho2 PF11262.8 gi|156937639|ref|YP_001435435.1| - 1.8 7.7 5.8 2.9 7.0 5.8 1.2 1 0 0 1 1 1 0 Transcription factor/nuclear export subunit protein 2 Med9 PF07544.13 gi|156937639|ref|YP_001435435.1| - 2 8.5 16.4 4.9 7.3 7.7 2.4 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF2203 PF09969.9 gi|156937639|ref|YP_001435435.1| - 2.1 9.1 6.9 3 8.6 6.5 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF724 PF05266.14 gi|156937639|ref|YP_001435435.1| - 2.2 8.1 10.6 0.87 9.4 8.1 1.5 2 0 0 2 2 1 0 Protein of unknown function (DUF724) Cauli_AT PF03233.13 gi|156937639|ref|YP_001435435.1| - 2.6 7.9 6.7 4.7 7.1 6.7 1.3 1 0 0 1 1 1 0 Aphid transmission protein LidA_Long_CC PF18641.1 gi|156937639|ref|YP_001435435.1| - 3.2 7.8 10.2 9.7 6.2 10.2 1.7 1 1 0 1 1 1 0 LidA long coiled-coil domain RP-C PF03428.13 gi|156937639|ref|YP_001435435.1| - 3.8 7.1 7.0 4.9 6.8 0.0 2.8 2 1 1 3 3 3 0 Replication protein C N-terminal domain CASP_C PF08172.12 gi|156937639|ref|YP_001435435.1| - 4.2 6.6 12.3 4.5 6.5 2.7 2.2 1 1 1 2 2 2 0 CASP C terminal Csm1_N PF18504.1 gi|156937639|ref|YP_001435435.1| - 5 7.5 15.6 94 3.5 15.6 2.5 1 1 0 1 1 1 0 Csm1 N-terminal domain DUF3375 PF11855.8 gi|156937639|ref|YP_001435435.1| - 6.3 5.6 10.9 7 5.5 9.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3375) DUF2076 PF09849.9 gi|156937639|ref|YP_001435435.1| - 7 6.6 6.0 2.5 8.1 0.5 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2076) DUF641 PF04859.12 gi|156937639|ref|YP_001435435.1| - 7.6 6.9 12.6 46 4.4 1.9 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) Spc24 PF08286.11 gi|156937639|ref|YP_001435435.1| - 7.8 6.8 12.4 1.3e+02 2.8 12.4 2.4 1 1 0 1 1 1 0 Spc24 subunit of Ndc80 Med4 PF10018.9 gi|156937639|ref|YP_001435435.1| - 7.9 6.1 12.4 31 4.2 11.0 2.1 1 1 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 XhlA PF10779.9 gi|156937639|ref|YP_001435435.1| - 8 6.7 16.9 0.4 10.9 2.6 2.9 2 1 1 3 3 2 0 Haemolysin XhlA NYD-SP28_assoc PF14775.6 gi|156937639|ref|YP_001435435.1| - 8.1 6.6 12.2 0.74 10.0 2.5 2.6 1 1 1 2 2 2 0 Sperm tail C-terminal domain IalB PF06776.12 gi|156937640|ref|YP_001435436.1| - 0.083 12.9 0.0 1.5 8.9 0.0 2.9 2 0 0 2 2 2 0 Invasion associated locus B (IalB) protein LEA_2 PF03168.13 gi|156937640|ref|YP_001435436.1| - 0.13 12.8 6.6 2.2 8.9 1.0 4.5 4 1 1 5 5 5 0 Late embryogenesis abundant protein Pkinase PF00069.25 gi|156937641|ref|YP_001435437.1| - 2.1e-05 24.0 0.0 0.00011 21.6 0.0 1.8 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|156937641|ref|YP_001435437.1| - 0.0025 17.2 0.0 0.013 14.8 0.0 1.8 1 1 0 1 1 1 1 Protein tyrosine kinase RIO1 PF01163.22 gi|156937641|ref|YP_001435437.1| - 0.007 16.0 0.0 0.02 14.5 0.0 1.6 1 1 1 2 2 2 1 RIO1 family CDC48_N PF02359.18 gi|156937641|ref|YP_001435437.1| - 0.095 12.9 0.0 0.2 11.8 0.0 1.6 1 1 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain ABC1 PF03109.16 gi|156937641|ref|YP_001435437.1| - 0.11 12.6 0.0 0.21 11.8 0.0 1.5 1 1 0 1 1 1 0 ABC1 family tRNA_NucTransf2 PF09249.11 gi|156937642|ref|YP_001435438.1| - 9.1e-40 135.4 0.0 1.6e-39 134.7 0.0 1.4 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|156937642|ref|YP_001435438.1| - 2.4e-10 40.5 0.1 6.3e-10 39.2 0.0 1.8 2 0 0 2 2 2 1 Nucleotidyltransferase domain LigT_PEase PF02834.16 gi|156937643|ref|YP_001435439.1| - 4.4e-35 119.7 0.4 2.8e-18 65.9 0.1 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|156937643|ref|YP_001435439.1| - 3.1e-15 56.4 0.0 4e-15 56.0 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|156937643|ref|YP_001435439.1| - 2.1e-12 47.4 0.0 2.6e-12 47.1 0.0 1.1 1 0 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain HVSL PF09749.9 gi|156937643|ref|YP_001435439.1| - 0.00017 21.2 0.0 0.00023 20.7 0.0 1.2 1 0 0 1 1 1 1 Uncharacterised conserved protein AAA_25 PF13481.6 gi|156937643|ref|YP_001435439.1| - 0.033 13.8 0.2 0.062 12.9 0.1 1.5 2 0 0 2 2 2 0 AAA domain CAP_GLY PF01302.25 gi|156937643|ref|YP_001435439.1| - 0.04 13.9 0.0 0.28 11.2 0.0 2.2 2 1 0 2 2 2 0 CAP-Gly domain TFIIS_C PF01096.18 gi|156937645|ref|YP_001435441.1| - 4.9e-22 77.5 9.3 1.2e-20 73.1 2.1 3.1 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.7 gi|156937645|ref|YP_001435441.1| - 6.1e-09 35.7 8.7 9.3e-05 22.3 1.8 2.2 2 0 0 2 2 2 2 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.16 gi|156937645|ref|YP_001435441.1| - 1e-08 34.9 6.9 1.7e-08 34.2 0.2 3.0 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.6 gi|156937645|ref|YP_001435441.1| - 8.2e-07 28.2 8.3 0.012 15.0 0.1 4.0 4 0 0 4 4 4 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|156937645|ref|YP_001435441.1| - 9.1e-07 28.4 11.8 0.22 11.3 0.1 4.2 4 0 0 4 4 4 2 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|156937645|ref|YP_001435441.1| - 5.1e-06 26.5 8.7 1.5 9.0 0.1 4.2 4 0 0 4 4 4 2 Zinc ribbon domain DZR PF12773.7 gi|156937645|ref|YP_001435441.1| - 0.00017 21.5 6.6 0.023 14.7 0.4 2.8 2 1 1 3 3 3 2 Double zinc ribbon zinc_ribbon_4 PF13717.6 gi|156937645|ref|YP_001435441.1| - 0.00023 21.0 13.8 0.14 12.1 1.2 4.2 4 0 0 4 4 4 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|156937645|ref|YP_001435441.1| - 0.00035 20.0 10.6 0.027 14.0 0.8 3.7 2 2 1 3 3 3 2 TFIIB zinc-binding DUF2387 PF09526.10 gi|156937645|ref|YP_001435441.1| - 0.00076 19.6 5.1 0.47 10.6 0.1 2.3 2 0 0 2 2 2 2 Probable metal-binding protein (DUF2387) OrfB_Zn_ribbon PF07282.11 gi|156937645|ref|YP_001435441.1| - 0.00079 19.3 8.1 0.062 13.2 1.8 2.8 2 1 0 2 2 2 2 Putative transposase DNA-binding domain UPF0547 PF10571.9 gi|156937645|ref|YP_001435441.1| - 0.001 19.1 15.0 1.2 9.3 0.3 4.2 4 0 0 4 4 4 1 Uncharacterised protein family UPF0547 Nudix_N_2 PF14803.6 gi|156937645|ref|YP_001435441.1| - 0.0028 17.5 13.8 0.14 12.1 2.1 3.7 2 2 1 3 3 3 1 Nudix N-terminal TackOD1 PF18551.1 gi|156937645|ref|YP_001435441.1| - 0.0034 17.1 4.0 0.14 11.8 0.1 2.8 1 1 0 2 2 2 1 Thaumarchaeal output domain 1 zf-TFIIB PF13453.6 gi|156937645|ref|YP_001435441.1| - 0.0043 16.3 0.6 0.0043 16.3 0.6 3.0 2 1 0 2 2 2 1 Transcription factor zinc-finger Lar_restr_allev PF14354.6 gi|156937645|ref|YP_001435441.1| - 0.0068 16.8 7.2 0.048 14.0 0.3 2.5 1 1 1 2 2 2 1 Restriction alleviation protein Lar zf_UBZ PF18439.1 gi|156937645|ref|YP_001435441.1| - 0.01 15.4 9.0 11 5.7 0.2 4.2 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger A2L_zn_ribbon PF08792.10 gi|156937645|ref|YP_001435441.1| - 0.014 15.1 9.3 6.8 6.5 0.1 4.1 4 0 0 4 4 4 0 A2L zinc ribbon domain Ogr_Delta PF04606.12 gi|156937645|ref|YP_001435441.1| - 0.021 14.8 14.2 0.15 12.1 0.0 3.9 3 1 0 3 3 3 0 Ogr/Delta-like zinc finger IBR PF01485.21 gi|156937645|ref|YP_001435441.1| - 0.025 14.8 8.9 24 5.3 8.9 3.0 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain zf-ACC PF17848.1 gi|156937645|ref|YP_001435441.1| - 0.025 14.7 8.6 8.7 6.5 0.0 4.1 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain zf-NADH-PPase PF09297.11 gi|156937645|ref|YP_001435441.1| - 0.027 14.1 13.3 0.45 10.2 3.8 4.0 3 1 1 4 4 4 0 NADH pyrophosphatase zinc ribbon domain FdhE PF04216.12 gi|156937645|ref|YP_001435441.1| - 0.029 14.3 6.4 0.31 10.9 0.5 2.1 1 1 1 2 2 2 0 Protein involved in formate dehydrogenase formation HypA PF01155.19 gi|156937645|ref|YP_001435441.1| - 0.031 14.3 6.4 0.71 9.9 2.8 3.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_13 PF09855.9 gi|156937645|ref|YP_001435441.1| - 0.044 13.9 7.7 5 7.4 0.0 4.1 4 0 0 4 4 4 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) eIF-5_eIF-2B PF01873.17 gi|156937645|ref|YP_001435441.1| - 0.057 13.3 4.0 2.6 8.0 0.3 2.5 2 1 0 2 2 2 0 Domain found in IF2B/IF5 Baculo_LEF5_C PF11792.8 gi|156937645|ref|YP_001435441.1| - 0.088 12.5 0.5 0.088 12.5 0.5 3.5 3 1 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain Ribosomal_L32p PF01783.23 gi|156937645|ref|YP_001435441.1| - 0.096 13.0 7.2 7.4 6.9 0.1 3.6 3 1 0 3 3 3 0 Ribosomal L32p protein family zf-C4_Topoisom PF01396.19 gi|156937645|ref|YP_001435441.1| - 0.21 11.4 15.4 0.083 12.7 2.7 3.2 2 2 2 4 4 4 0 Topoisomerase DNA binding C4 zinc finger DNA_RNApol_7kD PF03604.13 gi|156937645|ref|YP_001435441.1| - 0.23 11.2 14.2 2.6 7.8 0.2 4.1 3 1 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit PhnA_Zn_Ribbon PF08274.12 gi|156937645|ref|YP_001435441.1| - 0.24 11.4 9.1 12 6.0 3.3 3.6 3 1 0 3 3 3 0 PhnA Zinc-Ribbon Med16 PF11635.8 gi|156937645|ref|YP_001435441.1| - 0.26 9.2 2.0 0.37 8.6 0.1 1.8 1 1 1 2 2 2 0 Mediator complex subunit 16 zf-C2HE PF16278.5 gi|156937645|ref|YP_001435441.1| - 0.27 11.7 3.3 28 5.2 0.0 3.2 3 0 0 3 3 3 0 C2HE / C2H2 / C2HC zinc-binding finger DNA_ligase_ZBD PF03119.16 gi|156937645|ref|YP_001435441.1| - 0.27 11.3 0.5 0.27 11.3 0.5 2.9 3 0 0 3 3 2 0 NAD-dependent DNA ligase C4 zinc finger domain zf-IS66 PF13005.7 gi|156937645|ref|YP_001435441.1| - 0.28 11.6 11.1 2.8 8.4 0.1 4.1 3 1 0 4 4 4 0 zinc-finger binding domain of transposase IS66 DUF35_N PF12172.8 gi|156937645|ref|YP_001435441.1| - 0.28 11.1 11.3 9.3 6.2 0.1 3.8 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Gmx_para_CXXCG PF09535.10 gi|156937645|ref|YP_001435441.1| - 0.4 9.9 0.0 0.4 9.9 0.0 2.5 1 1 2 3 3 3 0 Protein of unknown function (Gmx_para_CXXCG) YhfH PF14149.6 gi|156937645|ref|YP_001435441.1| - 0.4 10.7 11.5 19 5.3 0.3 4.2 3 1 1 4 4 4 0 YhfH-like protein Rubredoxin PF00301.20 gi|156937645|ref|YP_001435441.1| - 0.61 10.2 11.1 5.1 7.2 0.0 4.0 4 0 0 4 4 4 0 Rubredoxin zinc-ribbons_6 PF07191.12 gi|156937645|ref|YP_001435441.1| - 0.66 10.0 7.8 9.6 6.3 3.5 3.1 1 1 1 2 2 2 0 zinc-ribbons zf-tcix PF14952.6 gi|156937645|ref|YP_001435441.1| - 0.71 9.5 12.5 7.7 6.2 0.1 4.2 4 0 0 4 4 4 0 Putative treble-clef, zinc-finger, Zn-binding GFA PF04828.14 gi|156937645|ref|YP_001435441.1| - 0.74 10.2 8.4 6.3 7.2 1.0 3.3 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme Desulfoferrod_N PF06397.12 gi|156937645|ref|YP_001435441.1| - 1 9.0 10.8 1.8 8.2 0.1 3.1 3 1 1 4 4 3 0 Desulfoferrodoxin, N-terminal domain Zn_ribbon_recom PF13408.6 gi|156937645|ref|YP_001435441.1| - 1 9.9 18.0 1.6 9.3 0.3 3.5 2 2 1 3 3 3 0 Recombinase zinc beta ribbon domain zinc_ribbon_9 PF14369.6 gi|156937645|ref|YP_001435441.1| - 1.1 9.6 0.1 1.1 9.6 0.1 3.7 3 1 1 4 4 4 0 zinc-ribbon NOB1_Zn_bind PF08772.11 gi|156937645|ref|YP_001435441.1| - 1.1 9.4 12.5 2.8e+02 1.8 8.5 3.8 2 1 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Zn_Tnp_IS91 PF14319.6 gi|156937645|ref|YP_001435441.1| - 1.1 9.3 11.2 5.7 7.1 0.1 3.9 1 1 2 4 4 4 0 Transposase zinc-binding domain Zn_ribbon_17 PF17120.5 gi|156937645|ref|YP_001435441.1| - 1.6 8.4 6.8 6.4 6.5 0.1 3.3 3 1 0 3 3 3 0 Zinc-ribbon, C4HC2 type HalOD2 PF18547.1 gi|156937645|ref|YP_001435441.1| - 1.6 8.7 11.0 1 9.4 0.5 3.6 3 1 0 3 3 3 0 Halobacterial output domain 2 Methyltransf_13 PF08421.11 gi|156937645|ref|YP_001435441.1| - 1.7 8.9 6.0 11 6.4 0.0 3.6 3 1 0 3 3 3 0 Putative zinc binding domain Terminase_GpA PF05876.12 gi|156937645|ref|YP_001435441.1| - 1.8 7.0 5.3 0.43 9.1 1.3 1.8 2 1 0 2 2 2 0 Phage terminase large subunit (GpA) zinc_ribbon_10 PF10058.9 gi|156937645|ref|YP_001435441.1| - 1.9 8.3 11.7 0.44 10.3 1.7 3.3 2 2 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Mu-like_Com PF10122.9 gi|156937645|ref|YP_001435441.1| - 2 7.9 13.0 26 4.4 0.3 4.1 3 1 1 4 4 4 0 Mu-like prophage protein Com zinc_ribbon_15 PF17032.5 gi|156937645|ref|YP_001435441.1| - 2.1 9.2 11.8 13 6.6 4.7 3.4 2 1 0 2 2 2 0 zinc-ribbon family Zn_ribbon_SprT PF17283.2 gi|156937645|ref|YP_001435441.1| - 2.1 8.3 12.6 7.3 6.6 0.7 3.5 2 1 1 3 3 3 0 SprT-like zinc ribbon domain DUF4379 PF14311.6 gi|156937645|ref|YP_001435441.1| - 2.9 8.3 12.3 3.9 7.9 0.8 3.7 3 1 1 4 4 4 0 Probable Zinc-ribbon domain Rpr2 PF04032.16 gi|156937645|ref|YP_001435441.1| - 4 7.8 11.1 24 5.3 0.2 3.3 1 1 1 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain RecR PF02132.15 gi|156937645|ref|YP_001435441.1| - 4.1 7.1 8.2 21 4.8 0.0 3.9 4 0 0 4 4 4 0 RecR protein Auto_anti-p27 PF06677.12 gi|156937645|ref|YP_001435441.1| - 6.7 7.0 12.8 1.6 9.0 2.6 2.7 3 0 0 3 3 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-HIT PF04438.16 gi|156937645|ref|YP_001435441.1| - 7.3 6.6 13.2 14 5.7 0.4 4.0 4 0 0 4 4 4 0 HIT zinc finger zf-Mss51 PF13824.6 gi|156937645|ref|YP_001435441.1| - 9 6.5 11.6 7.3 6.8 2.5 3.4 1 1 1 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1936 PF09151.10 gi|156937645|ref|YP_001435441.1| - 10 6.2 12.6 7.2 6.6 0.2 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF1936) tRNA-synt_2b PF00587.25 gi|156937646|ref|YP_001435442.1| - 2.7e-35 121.9 0.0 5.6e-35 120.9 0.0 1.5 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|156937646|ref|YP_001435442.1| - 5e-05 23.4 2.6 0.00012 22.2 2.6 1.7 1 0 0 1 1 1 1 Anticodon binding domain PCNA_N PF00705.18 gi|156937647|ref|YP_001435443.1| - 1.4e-15 57.1 0.0 2.1e-15 56.5 0.0 1.3 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|156937647|ref|YP_001435443.1| - 9.3e-13 48.5 0.0 2.3e-12 47.2 0.0 1.6 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|156937647|ref|YP_001435443.1| - 3.8e-08 32.7 0.1 4.3e-06 26.0 0.0 2.1 1 1 0 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 gi|156937647|ref|YP_001435443.1| - 0.00015 21.3 0.0 0.00033 20.2 0.0 1.5 2 0 0 2 2 2 1 Rad9 Hus1 PF04005.12 gi|156937647|ref|YP_001435443.1| - 0.097 11.8 0.0 0.16 11.0 0.0 1.4 1 1 0 1 1 1 0 Hus1-like protein DNA_primase_S PF01896.19 gi|156937648|ref|YP_001435444.1| - 7e-08 32.7 0.3 5.8e-07 29.7 0.3 2.1 1 1 0 1 1 1 1 DNA primase small subunit CxxCxxCC PF03692.15 gi|156937649|ref|YP_001435445.1| - 0.00055 20.6 3.0 0.00094 19.8 3.0 1.4 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain CN_hydrolase PF00795.22 gi|156937650|ref|YP_001435446.1| - 1.2e-21 77.2 0.0 1.8e-21 76.7 0.0 1.2 1 1 0 1 1 1 1 Carbon-nitrogen hydrolase PadR PF03551.14 gi|156937651|ref|YP_001435447.1| - 1.1e-13 50.9 0.0 2.9e-13 49.6 0.0 1.7 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|156937651|ref|YP_001435447.1| - 4.3e-07 30.6 0.1 4.2e-06 27.4 0.1 2.0 1 1 0 1 1 1 1 Replication terminator protein Mrr_N PF14338.6 gi|156937651|ref|YP_001435447.1| - 9.3e-05 22.5 0.2 0.00064 19.8 0.0 2.2 1 1 1 2 2 2 1 Mrr N-terminal domain HTH_45 PF14947.6 gi|156937651|ref|YP_001435447.1| - 0.0018 18.2 2.3 0.0033 17.4 0.0 2.5 4 0 0 4 4 4 1 Winged helix-turn-helix PqqD PF05402.12 gi|156937651|ref|YP_001435447.1| - 0.0018 18.5 0.0 0.14 12.4 0.1 2.3 1 1 1 2 2 2 1 Coenzyme PQQ synthesis protein D (PqqD) RQC PF09382.10 gi|156937651|ref|YP_001435447.1| - 0.0043 16.8 0.0 0.0079 16.0 0.0 1.5 1 1 0 1 1 1 1 RQC domain HTH_5 PF01022.20 gi|156937651|ref|YP_001435447.1| - 0.0087 15.9 0.1 38 4.2 0.0 3.2 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|156937651|ref|YP_001435447.1| - 0.0096 15.7 0.0 0.063 13.1 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain DUF4364 PF14277.6 gi|156937651|ref|YP_001435447.1| - 0.023 14.4 0.1 0.042 13.6 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) TrmB PF01978.19 gi|156937651|ref|YP_001435447.1| - 0.038 13.9 0.0 0.13 12.2 0.0 1.9 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HemN_C PF06969.16 gi|156937651|ref|YP_001435447.1| - 0.049 13.7 0.0 0.081 13.0 0.0 1.5 1 0 0 1 1 1 0 HemN C-terminal domain Rotavirus_VP3 PF06929.11 gi|156937651|ref|YP_001435447.1| - 0.06 11.6 0.0 0.067 11.4 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP3 protein Aminotran_1_2 PF00155.21 gi|156937652|ref|YP_001435448.1| - 1.3e-41 143.0 0.0 1.4e-41 142.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|156937652|ref|YP_001435448.1| - 1.7e-13 50.2 0.0 2.4e-13 49.7 0.0 1.2 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Aminotran_5 PF00266.19 gi|156937652|ref|YP_001435448.1| - 3.6e-05 22.9 0.0 5.3e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|156937652|ref|YP_001435448.1| - 0.0092 15.3 0.0 0.016 14.5 0.0 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_3 PF00202.21 gi|156937652|ref|YP_001435448.1| - 0.18 10.4 0.0 0.39 9.3 0.0 1.5 2 0 0 2 2 2 0 Aminotransferase class-III Ribosomal_S13_N PF08069.12 gi|156937653|ref|YP_001435449.1| - 1.3e-23 82.7 0.1 2.6e-23 81.8 0.1 1.5 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|156937653|ref|YP_001435449.1| - 1.6e-17 63.5 0.0 2.3e-17 62.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S15 Pcc1 PF09341.10 gi|156937655|ref|YP_001435451.1| - 0.004 17.3 0.0 0.005 16.9 0.0 1.1 1 0 0 1 1 1 1 Transcription factor Pcc1 Ribosomal_S3Ae PF01015.18 gi|156937656|ref|YP_001435452.1| - 5.5e-65 218.7 2.1 6.2e-65 218.6 2.1 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family Band_7 PF01145.25 gi|156937656|ref|YP_001435452.1| - 0.016 15.2 0.6 0.057 13.4 0.6 2.0 1 1 0 1 1 1 0 SPFH domain / Band 7 family TAFII28 PF04719.14 gi|156937656|ref|YP_001435452.1| - 0.071 13.2 0.6 5.5 7.1 0.1 2.3 2 0 0 2 2 2 0 hTAFII28-like protein conserved region DHC_N2 PF08393.13 gi|156937656|ref|YP_001435452.1| - 0.13 11.3 0.0 0.15 11.1 0.0 1.1 1 0 0 1 1 1 0 Dynein heavy chain, N-terminal region 2 ZnuA PF01297.17 gi|156937656|ref|YP_001435452.1| - 0.15 11.4 0.0 0.19 11.1 0.0 1.2 1 0 0 1 1 1 0 Zinc-uptake complex component A periplasmic HhH-GPD PF00730.25 gi|156937657|ref|YP_001435453.1| - 1.7e-21 76.7 0.0 2.2e-21 76.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.9 gi|156937657|ref|YP_001435453.1| - 3e-06 27.4 5.7 4.6e-06 26.8 5.7 1.3 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH_5 PF14520.6 gi|156937657|ref|YP_001435453.1| - 1.3e-05 25.7 1.3 0.0073 16.9 0.1 2.3 2 0 0 2 2 2 2 Helix-hairpin-helix domain HHH_8 PF14716.6 gi|156937657|ref|YP_001435453.1| - 0.00085 19.6 0.8 0.002 18.5 0.3 1.8 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH PF00633.23 gi|156937657|ref|YP_001435453.1| - 0.0087 15.9 0.1 0.026 14.4 0.1 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix motif DUF2400 PF09674.10 gi|156937657|ref|YP_001435453.1| - 0.041 13.9 0.0 0.093 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) Haem_oxygenas_2 PF14518.6 gi|156937657|ref|YP_001435453.1| - 0.12 12.2 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Iron-containing redox enzyme RSN1_7TM PF02714.15 gi|156937658|ref|YP_001435454.1| - 0.021 14.1 0.5 0.062 12.6 0.1 1.7 2 0 0 2 2 2 0 Calcium-dependent channel, 7TM region, putative phosphate Vut_1 PF02592.15 gi|156937659|ref|YP_001435455.1| - 0.024 14.9 0.9 0.031 14.6 0.9 1.1 1 0 0 1 1 1 0 Putative vitamin uptake transporter QueC PF06508.13 gi|156937660|ref|YP_001435456.1| - 1e-48 165.6 0.0 1.2e-48 165.4 0.0 1.0 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 gi|156937660|ref|YP_001435456.1| - 0.00055 19.7 0.0 0.0011 18.7 0.0 1.4 2 0 0 2 2 2 1 Asparagine synthase NAD_synthase PF02540.17 gi|156937660|ref|YP_001435456.1| - 0.0042 16.2 0.2 0.021 14.0 0.0 1.9 2 0 0 2 2 2 1 NAD synthase KDGP_aldolase PF07071.11 gi|156937660|ref|YP_001435456.1| - 0.016 15.0 0.0 0.022 14.6 0.0 1.2 1 0 0 1 1 1 0 KDGP aldolase Radical_SAM PF04055.21 gi|156937661|ref|YP_001435457.1| - 3.5e-17 63.3 0.1 6.3e-17 62.5 0.1 1.4 1 0 0 1 1 1 1 Radical SAM superfamily AP_endonuc_2 PF01261.24 gi|156937661|ref|YP_001435457.1| - 0.01 15.3 0.0 0.034 13.6 0.0 1.8 1 1 1 2 2 2 0 Xylose isomerase-like TIM barrel IF2_N PF04760.15 gi|156937661|ref|YP_001435457.1| - 0.018 14.8 0.1 0.13 12.1 0.1 2.4 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HD PF01966.22 gi|156937662|ref|YP_001435458.1| - 0.00024 21.3 0.1 0.0011 19.1 0.1 2.1 1 1 0 1 1 1 1 HD domain Glyco_hydro_130 PF04041.13 gi|156937663|ref|YP_001435459.1| - 6.8e-51 173.1 0.2 1e-50 172.5 0.2 1.2 1 0 0 1 1 1 1 beta-1,4-mannooligosaccharide phosphorylase Inos-1-P_synth PF01658.17 gi|156937664|ref|YP_001435460.1| - 1.9e-21 76.4 0.0 4.2e-21 75.2 0.0 1.6 2 0 0 2 2 2 1 Myo-inositol-1-phosphate synthase PhoH PF02562.16 gi|156937665|ref|YP_001435461.1| - 8.3e-56 188.7 0.1 1.2e-55 188.2 0.1 1.2 1 0 0 1 1 1 1 PhoH-like protein KH_2 PF07650.17 gi|156937665|ref|YP_001435461.1| - 6.7e-07 29.0 0.2 5.8e-05 22.8 0.1 2.7 1 1 1 2 2 2 1 KH domain KH_1 PF00013.29 gi|156937665|ref|YP_001435461.1| - 0.00012 21.9 0.0 0.0033 17.2 0.0 2.7 2 0 0 2 2 2 1 KH domain KH_5 PF13184.6 gi|156937665|ref|YP_001435461.1| - 0.00048 20.2 0.0 2.8 8.1 0.0 3.6 3 0 0 3 3 3 1 NusA-like KH domain AAA_22 PF13401.6 gi|156937665|ref|YP_001435461.1| - 0.0056 17.0 0.1 0.023 15.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156937665|ref|YP_001435461.1| - 0.042 13.6 0.1 0.13 11.9 0.1 1.8 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|156937665|ref|YP_001435461.1| - 0.14 11.9 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Zot PF05707.12 gi|156937665|ref|YP_001435461.1| - 0.2 11.3 0.4 23 4.6 0.1 2.6 1 1 1 2 2 2 0 Zonular occludens toxin (Zot) AAA_15 PF13175.6 gi|156937665|ref|YP_001435461.1| - 0.23 11.1 0.0 0.48 10.1 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain NTP_transferase PF00483.23 gi|156937666|ref|YP_001435462.1| - 1.2e-25 90.5 0.0 1.6e-25 90.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|156937666|ref|YP_001435462.1| - 6.9e-15 55.8 0.1 9.6e-15 55.3 0.1 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|156937666|ref|YP_001435462.1| - 8.9e-11 41.1 4.5 0.0012 18.5 0.0 3.6 3 0 0 3 3 3 3 Bacterial transferase hexapeptide (six repeats) IspD PF01128.19 gi|156937666|ref|YP_001435462.1| - 5.3e-05 23.1 0.0 7.6e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Hexapep_2 PF14602.6 gi|156937666|ref|YP_001435462.1| - 0.0015 18.3 1.2 0.13 12.0 0.8 3.0 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase DUF4346 PF14251.6 gi|156937667|ref|YP_001435463.1| - 0.00076 19.5 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) VitK2_biosynth PF02621.14 gi|156937668|ref|YP_001435464.1| - 2.7e-85 286.1 0.1 3.1e-85 285.9 0.1 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis YhfZ_C PF14503.6 gi|156937668|ref|YP_001435464.1| - 0.00016 21.3 0.0 0.00023 20.8 0.0 1.2 1 0 0 1 1 1 1 YhfZ C-terminal domain NMT1 PF09084.11 gi|156937668|ref|YP_001435464.1| - 0.011 15.7 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 0 NMT1/THI5 like DUF2201_N PF13203.6 gi|156937669|ref|YP_001435465.1| - 5.1e-16 59.1 0.0 8.8e-16 58.3 0.0 1.3 1 1 0 1 1 1 1 Putative metallopeptidase domain DUF2201 PF09967.9 gi|156937669|ref|YP_001435465.1| - 1.2e-09 38.3 0.0 2.1e-09 37.6 0.0 1.5 1 0 0 1 1 1 1 VWA-like domain (DUF2201) VWA PF00092.28 gi|156937669|ref|YP_001435465.1| - 7.5e-06 26.3 0.1 1.6e-05 25.2 0.1 1.5 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|156937669|ref|YP_001435465.1| - 0.00011 22.8 0.0 0.00028 21.5 0.0 1.7 1 0 0 1 1 1 1 von Willebrand factor type A domain Peptidase_M48 PF01435.18 gi|156937669|ref|YP_001435465.1| - 0.046 13.5 0.0 0.12 12.1 0.0 1.6 2 0 0 2 2 2 0 Peptidase family M48 PCMT PF01135.19 gi|156937670|ref|YP_001435466.1| - 3.3e-77 259.0 0.1 4e-77 258.7 0.1 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|156937670|ref|YP_001435466.1| - 1.7e-14 53.8 0.0 2.5e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|156937670|ref|YP_001435466.1| - 1.7e-08 35.0 0.0 3.3e-08 34.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|156937670|ref|YP_001435466.1| - 1.2e-07 31.6 0.0 1.8e-07 31.1 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit RrnaAD PF00398.20 gi|156937670|ref|YP_001435466.1| - 6.1e-06 25.5 0.0 9.8e-06 24.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Ubie_methyltran PF01209.18 gi|156937670|ref|YP_001435466.1| - 7.4e-06 25.5 0.0 1.1e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Fibrillarin PF01269.17 gi|156937670|ref|YP_001435466.1| - 9.7e-06 24.9 0.0 1.4e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_11 PF08241.12 gi|156937670|ref|YP_001435466.1| - 1.4e-05 25.7 0.0 6.5e-05 23.5 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|156937670|ref|YP_001435466.1| - 2.8e-05 23.4 0.0 8.1e-05 21.9 0.0 1.7 1 1 0 1 1 1 1 O-methyltransferase Methyltr_RsmB-F PF01189.17 gi|156937670|ref|YP_001435466.1| - 0.00016 21.4 0.0 0.00023 20.9 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_23 PF13489.6 gi|156937670|ref|YP_001435466.1| - 0.00023 21.0 0.0 0.00036 20.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|156937670|ref|YP_001435466.1| - 0.0011 18.4 0.0 0.002 17.6 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.6 gi|156937670|ref|YP_001435466.1| - 0.0023 18.0 0.0 0.0031 17.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|156937670|ref|YP_001435466.1| - 0.0026 18.8 0.0 0.0052 17.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|156937670|ref|YP_001435466.1| - 0.0029 18.3 0.0 0.0044 17.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|156937670|ref|YP_001435466.1| - 0.0059 16.0 0.0 0.0085 15.4 0.0 1.1 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G DUF938 PF06080.12 gi|156937670|ref|YP_001435466.1| - 0.01 15.6 0.0 0.015 15.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) CMAS PF02353.20 gi|156937670|ref|YP_001435466.1| - 0.014 14.7 0.0 0.019 14.3 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ACP_syn_III_C PF08541.10 gi|156937670|ref|YP_001435466.1| - 0.015 15.5 0.0 0.034 14.3 0.0 1.7 2 0 0 2 2 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LytR_C PF13399.6 gi|156937670|ref|YP_001435466.1| - 0.029 15.4 0.0 0.056 14.4 0.0 1.5 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator MTS PF05175.14 gi|156937670|ref|YP_001435466.1| - 0.085 12.4 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_21 PF05050.12 gi|156937670|ref|YP_001435466.1| - 0.1 12.6 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase FkbM domain DREV PF05219.12 gi|156937670|ref|YP_001435466.1| - 0.25 10.4 0.0 0.37 9.9 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase IMD PF08397.11 gi|156937671|ref|YP_001435467.1| - 0.023 14.1 3.5 0.026 13.9 3.5 1.1 1 0 0 1 1 1 0 IRSp53/MIM homology domain IKKbetaNEMObind PF12179.8 gi|156937671|ref|YP_001435467.1| - 0.046 13.8 0.9 0.046 13.8 0.9 2.3 1 1 2 3 3 3 0 I-kappa-kinase-beta NEMO binding domain TraG_N PF07916.11 gi|156937671|ref|YP_001435467.1| - 0.092 11.6 7.3 0.1 11.4 7.3 1.0 1 0 0 1 1 1 0 TraG-like protein, N-terminal region DUF4199 PF13858.6 gi|156937671|ref|YP_001435467.1| - 0.76 10.2 8.7 1.1 9.7 8.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) tRNA-synt_His PF13393.6 gi|156937672|ref|YP_001435468.1| - 1.2e-50 172.6 0.1 1.6e-50 172.1 0.1 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|156937672|ref|YP_001435468.1| - 9.6e-13 48.1 0.6 2.2e-12 46.9 0.4 1.8 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|156937672|ref|YP_001435468.1| - 8.3e-11 42.2 0.0 3e-10 40.4 0.0 2.1 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 gi|156937672|ref|YP_001435468.1| - 2.1e-05 24.1 0.1 0.00013 21.6 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 gi|156937672|ref|YP_001435468.1| - 0.01 14.9 1.2 1.4 8.0 0.1 2.4 2 0 0 2 2 2 0 tRNA synthetases class II (D, K and N) Phycobilisome PF00502.19 gi|156937672|ref|YP_001435468.1| - 0.1 12.6 0.0 0.28 11.1 0.0 1.7 1 1 0 1 1 1 0 Phycobilisome protein Pyrophosphatase PF00719.19 gi|156937673|ref|YP_001435469.1| - 1.6e-57 193.8 1.4 1.9e-57 193.6 1.4 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase InPase PF18823.1 gi|156937673|ref|YP_001435469.1| - 0.053 13.2 0.8 0.59 9.8 0.0 2.2 2 0 0 2 2 2 0 Inorganic Pyrophosphatase KORA PF16509.5 gi|156937673|ref|YP_001435469.1| - 0.073 13.4 0.0 0.12 12.7 0.0 1.3 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor TrmB PF01978.19 gi|156937675|ref|YP_001435471.1| - 8.8e-05 22.3 2.1 0.0004 20.2 0.5 2.3 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB GPP34 PF05719.11 gi|156937675|ref|YP_001435471.1| - 0.00045 20.3 0.0 0.00053 20.1 0.0 1.2 1 0 0 1 1 1 1 Golgi phosphoprotein 3 (GPP34) HTH_27 PF13463.6 gi|156937675|ref|YP_001435471.1| - 0.00094 19.6 0.4 0.0043 17.5 0.1 2.2 3 0 0 3 3 2 1 Winged helix DNA-binding domain HTH_29 PF13551.6 gi|156937675|ref|YP_001435471.1| - 0.0022 18.0 0.0 0.0042 17.1 0.0 1.5 1 1 0 1 1 1 1 Winged helix-turn helix HTH_23 PF13384.6 gi|156937675|ref|YP_001435471.1| - 0.0027 17.5 0.0 0.0066 16.2 0.0 1.7 1 0 0 1 1 1 1 Homeodomain-like domain GerE PF00196.19 gi|156937675|ref|YP_001435471.1| - 0.0027 17.2 0.1 0.0061 16.1 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family FeoC PF09012.10 gi|156937675|ref|YP_001435471.1| - 0.0075 16.3 0.4 0.024 14.7 0.2 1.9 2 0 0 2 2 2 1 FeoC like transcriptional regulator HTH_28 PF13518.6 gi|156937675|ref|YP_001435471.1| - 0.0079 16.3 0.0 0.028 14.5 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|156937675|ref|YP_001435471.1| - 0.0097 15.6 1.3 0.017 14.8 0.1 2.0 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_45 PF14947.6 gi|156937675|ref|YP_001435471.1| - 0.014 15.4 1.2 0.042 13.8 0.4 2.1 1 1 1 2 2 2 0 Winged helix-turn-helix MarR PF01047.22 gi|156937675|ref|YP_001435471.1| - 0.023 14.6 0.1 0.043 13.8 0.1 1.5 1 0 0 1 1 1 0 MarR family PWI PF01480.17 gi|156937675|ref|YP_001435471.1| - 0.04 14.2 0.2 0.088 13.1 0.2 1.5 1 0 0 1 1 1 0 PWI domain HTH_7 PF02796.15 gi|156937675|ref|YP_001435471.1| - 0.056 13.5 0.1 0.39 10.8 0.0 2.4 3 0 0 3 3 3 0 Helix-turn-helix domain of resolvase SMC_ScpB PF04079.16 gi|156937675|ref|YP_001435471.1| - 0.06 13.0 0.3 0.41 10.2 0.1 1.9 1 1 1 2 2 2 0 Segregation and condensation complex subunit ScpB Rrf2 PF02082.20 gi|156937675|ref|YP_001435471.1| - 0.062 13.7 0.1 0.16 12.4 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_38 PF13936.6 gi|156937675|ref|YP_001435471.1| - 0.065 13.0 0.1 0.3 10.9 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_40 PF14493.6 gi|156937675|ref|YP_001435471.1| - 0.068 13.6 0.2 0.11 13.0 0.2 1.4 1 1 0 1 1 1 0 Helix-turn-helix domain RuvB_C PF05491.13 gi|156937675|ref|YP_001435471.1| - 0.082 12.8 0.2 0.16 11.9 0.2 1.6 1 1 0 1 1 1 0 RuvB C-terminal winged helix domain PH_3 PF14593.6 gi|156937675|ref|YP_001435471.1| - 0.16 12.1 0.4 0.35 11.0 0.4 1.7 1 1 0 1 1 1 0 PH domain MazE_antitoxin PF04014.18 gi|156937676|ref|YP_001435472.1| - 5.2e-06 26.3 0.1 1.9e-05 24.5 0.1 2.0 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin Glyco_transf_52 PF07922.11 gi|156937676|ref|YP_001435472.1| - 0.0048 16.2 0.2 0.0048 16.2 0.2 1.7 2 0 0 2 2 2 1 Glycosyltransferase family 52 SIN1_PH PF16979.5 gi|156937676|ref|YP_001435472.1| - 0.026 14.8 0.0 8.8 6.6 0.0 2.4 2 0 0 2 2 2 0 SAPK-interacting protein 1 (Sin1), Pleckstrin-homology PRD PF00874.20 gi|156937676|ref|YP_001435472.1| - 0.52 10.6 6.2 3.9 7.8 0.4 3.4 3 1 1 4 4 4 0 PRD domain PGM_PMM_I PF02878.16 gi|156937678|ref|YP_001435474.1| - 5.8e-44 149.2 0.0 1e-43 148.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|156937678|ref|YP_001435474.1| - 3.4e-24 85.4 0.1 7.3e-24 84.4 0.1 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|156937678|ref|YP_001435474.1| - 1e-18 67.6 0.0 2.1e-18 66.6 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|156937678|ref|YP_001435474.1| - 1.1e-11 44.8 0.0 3.5e-11 43.1 0.0 1.8 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Ion_trans_2 PF07885.16 gi|156937679|ref|YP_001435475.1| - 4.4e-17 61.8 5.7 1e-16 60.7 5.7 1.6 1 0 0 1 1 1 1 Ion channel TrkA_N PF02254.18 gi|156937679|ref|YP_001435475.1| - 4.3e-07 30.2 0.1 8.5e-07 29.2 0.1 1.5 1 0 0 1 1 1 1 TrkA-N domain Ion_trans PF00520.31 gi|156937679|ref|YP_001435475.1| - 0.011 15.0 4.1 0.025 13.8 4.1 1.5 1 1 0 1 1 1 0 Ion transport protein ArAE_2_N PF10337.9 gi|156937679|ref|YP_001435475.1| - 0.59 9.1 4.4 0.81 8.7 4.4 1.1 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal ANAPC4_WD40 PF12894.7 gi|156937680|ref|YP_001435476.1| - 0.024 14.9 1.0 0.12 12.6 0.1 2.6 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain FtsQ PF03799.15 gi|156937680|ref|YP_001435476.1| - 0.096 13.5 0.1 0.17 12.7 0.1 1.4 1 0 0 1 1 1 0 Cell division protein FtsQ Phos_pyr_kin PF08543.12 gi|156937681|ref|YP_001435477.1| - 3.7e-45 154.2 0.3 5.2e-45 153.8 0.3 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|156937681|ref|YP_001435477.1| - 2.3e-42 144.4 0.0 5e-42 143.3 0.0 1.5 1 0 0 1 1 1 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|156937681|ref|YP_001435477.1| - 5e-09 35.9 0.3 7.3e-09 35.3 0.3 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|156937681|ref|YP_001435477.1| - 0.036 13.5 0.0 0.052 13.0 0.0 1.2 1 0 0 1 1 1 0 Carbohydrate kinase HK PF02110.15 gi|156937681|ref|YP_001435477.1| - 0.045 13.1 0.1 0.068 12.5 0.1 1.3 1 0 0 1 1 1 0 Hydroxyethylthiazole kinase family Lon_C PF05362.13 gi|156937682|ref|YP_001435478.1| - 2.1e-14 53.6 0.4 3.3e-14 52.9 0.4 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain ChlI PF13541.6 gi|156937682|ref|YP_001435478.1| - 0.0014 18.5 0.0 0.0036 17.2 0.0 1.7 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase Ribonuc_2-5A PF06479.12 gi|156937682|ref|YP_001435478.1| - 0.15 12.2 0.1 3.1 8.0 0.0 2.2 2 0 0 2 2 2 0 Ribonuclease 2-5A DUF72 PF01904.18 gi|156937683|ref|YP_001435479.1| - 4.9e-42 144.5 0.1 5.9e-42 144.2 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 Transket_pyr PF02779.24 gi|156937684|ref|YP_001435480.1| - 3.9e-35 121.1 0.0 6.1e-35 120.5 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|156937684|ref|YP_001435480.1| - 4.7e-23 81.4 0.1 2.1e-22 79.3 0.1 2.1 1 1 1 2 2 2 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|156937684|ref|YP_001435480.1| - 0.0086 16.4 0.0 0.019 15.2 0.0 1.7 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II PDH PF02153.17 gi|156937685|ref|YP_001435481.1| - 6.7e-31 107.2 0.0 9.1e-31 106.8 0.0 1.2 1 0 0 1 1 1 1 Prephenate dehydrogenase CM_2 PF01817.21 gi|156937685|ref|YP_001435481.1| - 6.4e-18 64.9 1.6 6.4e-18 64.9 1.6 2.1 2 0 0 2 2 2 1 Chorismate mutase type II F420_oxidored PF03807.17 gi|156937685|ref|YP_001435481.1| - 1e-14 54.8 0.1 6.3e-14 52.3 0.0 2.4 2 1 1 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|156937685|ref|YP_001435481.1| - 3e-11 43.8 0.0 7.9e-11 42.4 0.0 1.7 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Rossmann-like PF10727.9 gi|156937685|ref|YP_001435481.1| - 1.2e-08 34.9 0.0 2.1e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Rossmann-like domain Shikimate_DH PF01488.20 gi|156937685|ref|YP_001435481.1| - 1.1e-06 28.7 0.2 3.5e-05 23.9 0.0 2.3 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 gi|156937685|ref|YP_001435481.1| - 5.1e-06 26.0 0.0 2.6e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 3HCDH_N PF02737.18 gi|156937685|ref|YP_001435481.1| - 0.00032 20.6 1.0 0.0018 18.2 0.0 2.6 2 1 1 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|156937685|ref|YP_001435481.1| - 0.0012 18.9 0.8 0.51 10.3 0.0 3.0 2 1 1 3 3 3 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IlvN PF07991.12 gi|156937685|ref|YP_001435481.1| - 0.0049 16.5 0.0 0.0097 15.5 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain GARP PF16731.5 gi|156937685|ref|YP_001435481.1| - 0.007 16.1 0.7 0.015 15.0 0.7 1.5 1 0 0 1 1 1 1 Glutamic acid/alanine-rich protein of Trypanosoma adh_short PF00106.25 gi|156937685|ref|YP_001435481.1| - 0.012 15.0 0.0 0.036 13.5 0.0 1.8 1 0 0 1 1 1 0 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|156937685|ref|YP_001435481.1| - 0.035 14.4 0.3 0.11 12.8 0.0 2.0 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA PF01408.22 gi|156937685|ref|YP_001435481.1| - 0.035 14.9 0.1 0.17 12.7 0.0 2.1 2 1 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold Wx5_PLAF3D7 PF09688.10 gi|156937685|ref|YP_001435481.1| - 0.051 13.6 0.3 0.12 12.4 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) SNF2_N PF00176.23 gi|156937685|ref|YP_001435481.1| - 0.091 11.5 0.1 0.095 11.4 0.1 1.1 1 0 0 1 1 1 0 SNF2 family N-terminal domain TrkA_N PF02254.18 gi|156937685|ref|YP_001435481.1| - 0.13 12.6 0.4 0.54 10.5 0.1 2.1 2 0 0 2 2 2 0 TrkA-N domain DrrA_P4M PF14860.6 gi|156937685|ref|YP_001435481.1| - 0.2 11.5 0.2 0.2 11.5 0.2 2.4 2 1 0 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain DUF4974 PF16344.5 gi|156937685|ref|YP_001435481.1| - 0.26 11.3 1.6 1.2 9.1 0.1 2.6 3 0 0 3 3 2 0 Domain of unknown function (DUF4974) DUF1700 PF08006.11 gi|156937687|ref|YP_001435483.1| - 0.11 12.0 4.0 0.11 12.1 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) EVI2A PF05399.11 gi|156937687|ref|YP_001435483.1| - 2 7.9 5.8 2.6 7.6 5.8 1.2 1 0 0 1 1 1 0 Ectropic viral integration site 2A protein (EVI2A) Cpn60_TCP1 PF00118.24 gi|156937688|ref|YP_001435484.1| - 3.2e-172 573.6 13.5 3.7e-172 573.3 13.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dak2 PF02734.17 gi|156937688|ref|YP_001435484.1| - 2.5e-05 24.3 1.8 0.00055 19.9 0.2 2.7 2 0 0 2 2 2 1 DAK2 domain Sulfotransfer_3 PF13469.6 gi|156937689|ref|YP_001435485.1| - 0.0014 19.1 0.0 0.0082 16.5 0.0 2.3 1 1 0 1 1 1 1 Sulfotransferase family Sulfotransfer_1 PF00685.27 gi|156937689|ref|YP_001435485.1| - 0.055 12.9 0.2 2.2 7.7 0.2 2.4 1 1 0 1 1 1 0 Sulfotransferase domain Pyr_redox_2 PF07992.14 gi|156937690|ref|YP_001435486.1| - 9e-20 71.1 0.1 2.7e-11 43.2 0.0 2.3 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|156937690|ref|YP_001435486.1| - 5.6e-08 33.2 2.0 0.0015 19.1 1.0 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|156937690|ref|YP_001435486.1| - 4.9e-05 23.1 1.4 0.00055 19.6 0.8 2.4 3 0 0 3 3 3 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|156937690|ref|YP_001435486.1| - 0.00013 21.4 1.9 0.00039 19.8 0.6 2.1 2 0 0 2 2 2 1 FAD binding domain NAD_binding_8 PF13450.6 gi|156937690|ref|YP_001435486.1| - 0.00015 21.9 0.2 0.00042 20.5 0.2 1.8 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|156937690|ref|YP_001435486.1| - 0.00035 19.8 1.2 0.00054 19.2 1.2 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|156937690|ref|YP_001435486.1| - 0.0037 16.0 0.5 0.36 9.5 0.3 2.6 3 0 0 3 3 3 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|156937690|ref|YP_001435486.1| - 0.01 15.1 1.2 0.18 11.0 0.8 2.6 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|156937690|ref|YP_001435486.1| - 0.012 14.7 0.2 0.061 12.4 0.1 2.1 3 0 0 3 3 3 0 Lycopene cyclase protein NAD_binding_9 PF13454.6 gi|156937690|ref|YP_001435486.1| - 0.017 15.1 1.3 6.2 6.8 0.3 2.9 2 1 1 3 3 3 0 FAD-NAD(P)-binding FAD_oxidored PF12831.7 gi|156937690|ref|YP_001435486.1| - 0.023 14.1 1.1 3.2 7.0 0.5 2.3 2 0 0 2 2 2 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|156937690|ref|YP_001435486.1| - 0.042 13.1 0.7 0.067 12.5 0.7 1.3 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|156937690|ref|YP_001435486.1| - 0.08 11.8 0.0 0.11 11.3 0.0 1.3 1 0 0 1 1 1 0 Tryptophan halogenase Thi4 PF01946.17 gi|156937690|ref|YP_001435486.1| - 0.094 11.9 0.3 0.21 10.8 0.3 1.6 1 0 0 1 1 1 0 Thi4 family Amino_oxidase PF01593.24 gi|156937690|ref|YP_001435486.1| - 0.12 11.7 0.4 25 4.0 0.0 3.0 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase GIDA PF01134.22 gi|156937690|ref|YP_001435486.1| - 0.61 9.1 4.7 0.29 10.1 2.0 1.9 2 1 0 2 2 2 0 Glucose inhibited division protein A Methyltr_RsmB-F PF01189.17 gi|156937691|ref|YP_001435487.1| - 3e-36 125.0 0.0 4.5e-36 124.4 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F PUA PF01472.20 gi|156937691|ref|YP_001435487.1| - 1e-08 35.0 0.2 3.2e-08 33.4 0.2 1.9 2 0 0 2 2 2 1 PUA domain Methyltransf_31 PF13847.6 gi|156937691|ref|YP_001435487.1| - 4.5e-07 29.8 0.0 7.9e-07 29.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain FtsJ PF01728.19 gi|156937691|ref|YP_001435487.1| - 0.00044 20.4 0.0 0.00098 19.3 0.0 1.5 1 1 0 1 1 1 1 FtsJ-like methyltransferase UPF0113 PF03657.13 gi|156937691|ref|YP_001435487.1| - 0.00082 19.6 0.0 0.0041 17.4 0.0 2.1 2 0 0 2 2 2 1 UPF0113 PUA domain Methyltransf_25 PF13649.6 gi|156937691|ref|YP_001435487.1| - 0.0011 19.6 0.0 0.0067 17.1 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156937691|ref|YP_001435487.1| - 0.019 15.6 0.0 9.4 7.0 0.0 2.8 3 0 0 3 3 3 0 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|156937691|ref|YP_001435487.1| - 0.089 12.4 0.0 0.24 11.0 0.0 1.5 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Pribosyltran PF00156.27 gi|156937693|ref|YP_001435489.1| - 2.1e-11 43.6 0.4 4.1e-11 42.7 0.4 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GATase_6 PF13522.6 gi|156937693|ref|YP_001435489.1| - 1.7e-09 38.0 0.0 3.7e-09 36.9 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|156937693|ref|YP_001435489.1| - 2.1e-09 37.4 0.0 3.9e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain Pribosyl_synth PF14572.6 gi|156937693|ref|YP_001435489.1| - 0.079 13.0 0.1 1.6 8.7 0.0 2.1 2 0 0 2 2 2 0 Phosphoribosyl synthetase-associated domain PRTase_2 PF15609.6 gi|156937693|ref|YP_001435489.1| - 0.12 11.8 0.1 0.2 11.2 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Metallophos_2 PF12850.7 gi|156937694|ref|YP_001435490.1| - 3e-23 82.8 0.0 3.4e-23 82.6 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|156937694|ref|YP_001435490.1| - 0.037 14.5 1.2 6.4 7.2 0.0 2.2 1 1 1 2 2 2 0 Calcineurin-like phosphoesterase THUMP PF02926.17 gi|156937695|ref|YP_001435491.1| - 3.1e-08 33.8 0.2 4.7e-08 33.2 0.2 1.3 1 0 0 1 1 1 1 THUMP domain DUF1013 PF06242.11 gi|156937696|ref|YP_001435492.1| - 0.00095 19.2 0.0 0.0013 18.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1013) HTH_3 PF01381.22 gi|156937696|ref|YP_001435492.1| - 0.0047 16.9 0.3 0.0099 15.9 0.1 1.6 2 0 0 2 2 2 1 Helix-turn-helix HTH_38 PF13936.6 gi|156937696|ref|YP_001435492.1| - 0.011 15.5 0.0 0.022 14.5 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|156937696|ref|YP_001435492.1| - 0.018 14.9 0.0 0.094 12.6 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|156937696|ref|YP_001435492.1| - 0.022 14.3 0.0 0.045 13.3 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|156937696|ref|YP_001435492.1| - 0.023 14.5 0.0 0.049 13.4 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain RelB PF04221.12 gi|156937696|ref|YP_001435492.1| - 0.025 14.5 0.0 0.19 11.7 0.0 2.0 2 0 0 2 2 2 0 RelB antitoxin Peptidase_C101 PF16218.5 gi|156937696|ref|YP_001435492.1| - 0.072 12.3 0.1 0.079 12.2 0.1 1.1 1 0 0 1 1 1 0 Peptidase family C101 HTH_Crp_2 PF13545.6 gi|156937696|ref|YP_001435492.1| - 0.086 12.8 0.0 0.25 11.3 0.0 1.8 3 0 0 3 3 3 0 Crp-like helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|156937696|ref|YP_001435492.1| - 0.11 12.2 0.1 0.2 11.4 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 Thioredoxin_3 PF13192.6 gi|156937697|ref|YP_001435493.1| - 2.2e-27 94.9 1.3 3.3e-16 59.1 0.2 2.3 2 0 0 2 2 2 2 Thioredoxin domain Glutaredoxin PF00462.24 gi|156937697|ref|YP_001435493.1| - 1.8e-05 24.8 1.3 0.0052 17.0 0.1 3.3 2 1 1 3 3 3 1 Glutaredoxin TraF PF13728.6 gi|156937697|ref|YP_001435493.1| - 0.00032 20.6 0.0 0.38 10.5 0.0 2.4 2 1 0 2 2 2 2 F plasmid transfer operon protein Thioredoxin_9 PF14595.6 gi|156937697|ref|YP_001435493.1| - 0.00094 19.0 0.1 0.023 14.5 0.0 2.1 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_8 PF13905.6 gi|156937697|ref|YP_001435493.1| - 0.0014 18.9 0.1 13 6.2 0.0 3.4 2 2 1 3 3 3 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|156937697|ref|YP_001435493.1| - 0.0039 17.6 4.3 0.17 12.3 0.0 3.1 2 1 0 2 2 2 1 Thioredoxin-like domain Thioredoxin PF00085.20 gi|156937697|ref|YP_001435493.1| - 0.0062 16.5 0.9 0.021 14.8 0.1 2.1 2 1 0 2 2 2 1 Thioredoxin DUF836 PF05768.14 gi|156937697|ref|YP_001435493.1| - 0.034 14.6 0.0 11 6.5 0.0 2.3 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) Thioredoxin_4 PF13462.6 gi|156937697|ref|YP_001435493.1| - 0.089 12.9 0.9 2.6 8.2 0.0 2.7 2 1 1 3 3 3 0 Thioredoxin TrbC_Ftype PF09673.10 gi|156937697|ref|YP_001435493.1| - 0.12 12.4 0.1 5.1 7.2 0.0 2.4 2 1 0 2 2 2 0 Type-F conjugative transfer system pilin assembly protein Ribosomal_L15e PF00827.17 gi|156937698|ref|YP_001435494.1| - 2e-81 272.3 4.2 2e-81 272.3 4.2 1.6 1 1 1 2 2 2 1 Ribosomal L15 zf-ZPR1 PF03367.13 gi|156937699|ref|YP_001435495.1| - 0.00056 19.8 0.0 0.0008 19.3 0.0 1.3 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Zn_ribbon_SprT PF17283.2 gi|156937699|ref|YP_001435495.1| - 0.0084 16.0 2.0 0.78 9.7 0.0 2.1 1 1 0 2 2 2 1 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 gi|156937699|ref|YP_001435495.1| - 0.019 15.1 0.2 2.2 8.4 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain PHD PF00628.29 gi|156937699|ref|YP_001435495.1| - 0.023 14.6 0.3 7.6 6.5 0.1 2.2 2 0 0 2 2 2 0 PHD-finger TF_Zn_Ribbon PF08271.12 gi|156937699|ref|YP_001435495.1| - 0.058 12.9 0.7 8.8 5.9 0.0 2.4 2 0 0 2 2 2 0 TFIIB zinc-binding Gin PF10764.9 gi|156937699|ref|YP_001435495.1| - 0.11 12.5 0.7 13 5.9 0.1 2.3 1 1 1 2 2 2 0 Inhibitor of sigma-G Gin zf_C2H2_10 PF18414.1 gi|156937699|ref|YP_001435495.1| - 1.3 8.6 3.1 5.2 6.7 0.3 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger PmbA_TldD PF01523.16 gi|156937700|ref|YP_001435496.1| - 6.8e-42 144.2 0.1 8.4e-42 143.9 0.1 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Creatininase PF02633.14 gi|156937701|ref|YP_001435497.1| - 8.1e-25 87.7 0.0 1e-24 87.3 0.0 1.2 1 0 0 1 1 1 1 Creatinine amidohydrolase Pyr_redox_2 PF07992.14 gi|156937702|ref|YP_001435498.1| - 2.6e-50 171.3 6.0 3.3e-50 171.0 6.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|156937702|ref|YP_001435498.1| - 3.1e-22 79.2 4.9 2.1e-16 60.1 0.5 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|156937702|ref|YP_001435498.1| - 9.7e-14 51.7 7.1 1.1e-08 35.5 0.1 3.7 3 1 1 4 4 4 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|156937702|ref|YP_001435498.1| - 1e-13 51.6 5.9 2e-06 27.7 0.1 3.7 2 1 1 3 3 3 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|156937702|ref|YP_001435498.1| - 6.5e-13 48.5 6.0 2.8e-08 33.3 0.4 3.9 1 1 2 4 4 4 3 FAD binding domain FAD_oxidored PF12831.7 gi|156937702|ref|YP_001435498.1| - 3.4e-11 43.1 5.0 4.9e-10 39.3 0.9 3.0 2 1 1 3 3 3 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|156937702|ref|YP_001435498.1| - 1e-10 40.9 0.6 2e-06 26.8 0.2 2.5 2 0 0 2 2 2 2 HI0933-like protein GIDA PF01134.22 gi|156937702|ref|YP_001435498.1| - 1.4e-09 37.6 12.5 4.4e-05 22.7 0.6 4.0 2 2 1 4 4 4 2 Glucose inhibited division protein A Thi4 PF01946.17 gi|156937702|ref|YP_001435498.1| - 2.8e-09 36.6 1.2 9.5e-08 31.6 0.2 2.5 2 0 0 2 2 2 1 Thi4 family NAD_binding_8 PF13450.6 gi|156937702|ref|YP_001435498.1| - 2.1e-08 34.3 0.4 4.3e-08 33.3 0.1 1.8 2 0 0 2 2 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 gi|156937702|ref|YP_001435498.1| - 3.5e-06 26.5 2.6 5.1e-05 22.7 0.3 2.6 2 1 1 3 3 3 1 FAD binding domain GMC_oxred_N PF00732.19 gi|156937702|ref|YP_001435498.1| - 8.2e-05 22.1 0.0 0.00018 21.0 0.0 1.5 1 0 0 1 1 1 1 GMC oxidoreductase Amino_oxidase PF01593.24 gi|156937702|ref|YP_001435498.1| - 0.00027 20.3 0.4 0.35 10.1 0.0 2.9 3 0 0 3 3 3 2 Flavin containing amine oxidoreductase NAD_binding_9 PF13454.6 gi|156937702|ref|YP_001435498.1| - 0.00032 20.7 1.4 0.031 14.2 0.1 2.8 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|156937702|ref|YP_001435498.1| - 0.0024 17.0 2.7 0.04 13.0 0.1 2.8 2 1 1 3 3 3 1 Lycopene cyclase protein K_oxygenase PF13434.6 gi|156937702|ref|YP_001435498.1| - 0.0048 16.1 0.5 3.8 6.6 0.0 2.8 3 0 0 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 gi|156937702|ref|YP_001435498.1| - 0.0069 15.7 0.1 0.0069 15.7 0.1 2.1 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain DUF5591 PF17884.1 gi|156937703|ref|YP_001435499.1| - 5.2e-17 62.1 0.9 6.8e-17 61.7 0.9 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) ABC-3 PF00950.17 gi|156937704|ref|YP_001435500.1| - 0.031 13.8 25.6 0.046 13.2 25.6 1.2 1 0 0 1 1 1 0 ABC 3 transport family ZnuA PF01297.17 gi|156937705|ref|YP_001435501.1| - 9.5e-10 38.3 0.0 1.7e-09 37.5 0.0 1.5 1 1 0 1 1 1 1 Zinc-uptake complex component A periplasmic HEV_ORF1 PF02444.16 gi|156937705|ref|YP_001435501.1| - 0.15 12.6 0.9 1.5 9.4 0.5 2.2 1 1 1 2 2 2 0 Hepatitis E virus ORF-2 (Putative capsid protein) DUF3954 PF13128.6 gi|156937705|ref|YP_001435501.1| - 0.18 11.7 1.2 6 6.7 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3954) NUDIX PF00293.28 gi|156937706|ref|YP_001435502.1| - 1.5e-28 99.4 0.9 1.8e-28 99.2 0.9 1.0 1 0 0 1 1 1 1 NUDIX domain DUF4916 PF16262.5 gi|156937706|ref|YP_001435502.1| - 2.5e-05 23.9 0.0 0.00055 19.5 0.0 2.0 1 1 0 1 1 1 1 Domain of unknown function (DUF4916) NUDIX_4 PF14815.6 gi|156937706|ref|YP_001435502.1| - 8.2e-05 22.6 0.1 0.00012 22.1 0.1 1.3 1 1 0 1 1 1 1 NUDIX domain Amidase PF01425.21 gi|156937707|ref|YP_001435503.1| - 1.6e-111 373.5 0.0 1.8e-111 373.3 0.0 1.0 1 0 0 1 1 1 1 Amidase Jag_N PF14804.6 gi|156937708|ref|YP_001435504.1| - 0.17 12.2 0.4 2.2 8.7 0.0 2.7 3 0 0 3 3 3 0 Jag N-terminus DUF2208 PF09973.9 gi|156937709|ref|YP_001435505.1| - 7.8e-59 199.1 2.9 9e-59 198.9 2.9 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) DUF2933 PF11666.8 gi|156937709|ref|YP_001435505.1| - 1.5 8.9 6.9 2.8 8.0 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2933) RseC_MucC PF04246.12 gi|156937709|ref|YP_001435505.1| - 3.2 7.7 4.1 31 4.5 0.7 2.1 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC EMG1 PF03587.14 gi|156937710|ref|YP_001435506.1| - 2.8e-44 151.1 0.0 3.2e-44 150.9 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Glyco_transf_4 PF13439.6 gi|156937710|ref|YP_001435506.1| - 0.038 14.0 0.1 0.059 13.4 0.1 1.3 1 0 0 1 1 1 0 Glycosyltransferase Family 4 GGACT PF06094.12 gi|156937711|ref|YP_001435507.1| - 2.7e-22 79.6 0.4 3.2e-22 79.4 0.4 1.0 1 0 0 1 1 1 1 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 gi|156937711|ref|YP_001435507.1| - 2.8e-09 37.2 0.1 4.9e-09 36.5 0.1 1.3 1 0 0 1 1 1 1 AIG2-like family CRCB PF02537.15 gi|156937712|ref|YP_001435508.1| - 7.8e-25 87.0 6.9 8.9e-25 86.8 6.9 1.0 1 0 0 1 1 1 1 CrcB-like protein, Camphor Resistance (CrcB) WCOR413 PF05562.11 gi|156937712|ref|YP_001435508.1| - 0.038 13.9 2.2 0.04 13.9 1.0 1.6 1 1 1 2 2 2 0 Cold acclimation protein WCOR413 ThrE_2 PF12821.7 gi|156937712|ref|YP_001435508.1| - 0.14 12.3 7.9 7.2 6.8 7.9 2.1 1 1 0 1 1 1 0 Threonine/Serine exporter, ThrE VIT1 PF01988.19 gi|156937712|ref|YP_001435508.1| - 1.6 8.6 8.1 2 8.2 8.1 1.4 1 1 0 1 1 1 0 VIT family DUF2628 PF10947.8 gi|156937712|ref|YP_001435508.1| - 3.8 7.9 7.2 1.5 9.2 0.2 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF2628) DUF4148 PF13663.6 gi|156937713|ref|YP_001435509.1| - 0.13 12.4 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4148) DUF2192 PF09958.9 gi|156937714|ref|YP_001435510.1| - 4.8e-83 278.2 3.1 5.3e-83 278.0 3.1 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2192) TPR_14 PF13428.6 gi|156937714|ref|YP_001435510.1| - 0.018 15.8 1.6 0.45 11.5 0.0 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat 60KD_IMP PF02096.20 gi|156937714|ref|YP_001435510.1| - 0.24 11.3 0.0 0.42 10.5 0.0 1.3 1 0 0 1 1 1 0 60Kd inner membrane protein TruB_N PF01509.18 gi|156937715|ref|YP_001435511.1| - 3.9e-22 79.2 0.2 5.2e-19 69.1 0.2 3.1 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|156937715|ref|YP_001435511.1| - 2.2e-19 69.4 0.0 4.3e-19 68.4 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|156937715|ref|YP_001435511.1| - 6.5e-18 64.5 3.2 1.2e-17 63.7 3.2 1.4 1 0 0 1 1 1 1 PUA domain DKCLD PF08068.12 gi|156937715|ref|YP_001435511.1| - 1.3e-17 63.6 0.0 2.6e-17 62.6 0.0 1.5 1 0 0 1 1 1 1 DKCLD (NUC011) domain UPF0113 PF03657.13 gi|156937715|ref|YP_001435511.1| - 0.021 15.1 0.1 0.057 13.7 0.1 1.7 1 0 0 1 1 1 0 UPF0113 PUA domain Chorismate_bind PF00425.18 gi|156937716|ref|YP_001435512.1| - 2.3e-84 283.0 0.0 2.9e-84 282.7 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|156937716|ref|YP_001435512.1| - 3.5e-10 40.3 0.0 1.8e-08 34.7 0.0 2.7 1 1 0 1 1 1 1 Anthranilate synthase component I, N terminal region Phytochelatin_C PF09328.10 gi|156937716|ref|YP_001435512.1| - 0.25 10.7 0.2 0.37 10.1 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1984) PRAI PF00697.22 gi|156937717|ref|YP_001435513.1| - 1.5e-23 83.6 0.0 2.4e-23 82.9 0.0 1.3 1 1 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Lactamase_B_2 PF12706.7 gi|156937718|ref|YP_001435514.1| - 4.2e-09 36.2 0.0 2e-08 34.0 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|156937718|ref|YP_001435514.1| - 8.4e-08 32.0 0.1 1.8e-07 31.0 0.1 1.5 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|156937718|ref|YP_001435514.1| - 1.7e-06 28.2 6.7 2e-05 24.7 4.0 2.9 2 2 1 3 3 3 1 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|156937718|ref|YP_001435514.1| - 0.0058 16.1 0.0 0.017 14.6 0.0 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Beta-Casp PF10996.8 gi|156937718|ref|YP_001435514.1| - 0.011 16.0 0.0 0.033 14.5 0.0 1.8 2 0 0 2 2 2 0 Beta-Casp domain Lactamase_B_3 PF13483.6 gi|156937718|ref|YP_001435514.1| - 0.037 13.9 0.0 0.086 12.7 0.0 1.6 1 1 0 1 1 1 0 Beta-lactamase superfamily domain tRNA-synt_1d PF00750.19 gi|156937719|ref|YP_001435515.1| - 6.8e-42 143.7 1.0 1.1e-31 110.0 0.5 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|156937719|ref|YP_001435515.1| - 4.2e-30 104.4 0.5 3.2e-29 101.5 0.0 2.4 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 gi|156937719|ref|YP_001435515.1| - 2.7e-13 50.3 0.0 1.1e-12 48.3 0.0 2.2 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain Cep57_MT_bd PF06657.13 gi|156937719|ref|YP_001435515.1| - 0.0083 16.6 0.4 14 6.2 0.1 3.4 3 0 0 3 3 3 1 Centrosome microtubule-binding domain of Cep57 DUF2240 PF09999.9 gi|156937719|ref|YP_001435515.1| - 0.038 13.6 0.0 0.078 12.6 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2240) DegS PF05384.11 gi|156937719|ref|YP_001435515.1| - 0.06 12.8 0.2 0.06 12.8 0.2 2.0 2 0 0 2 2 2 0 Sensor protein DegS tRNA-synt_1e PF01406.19 gi|156937719|ref|YP_001435515.1| - 0.15 11.4 0.0 0.98 8.7 0.0 2.4 3 1 0 3 3 3 0 tRNA synthetases class I (C) catalytic domain Unstab_antitox PF09720.10 gi|156937719|ref|YP_001435515.1| - 0.17 12.0 3.8 0.27 11.3 1.9 2.4 2 0 0 2 2 2 0 Putative addiction module component Histidinol_dh PF00815.20 gi|156937719|ref|YP_001435515.1| - 0.21 10.5 0.1 0.41 9.6 0.1 1.4 1 0 0 1 1 1 0 Histidinol dehydrogenase YtxH PF12732.7 gi|156937719|ref|YP_001435515.1| - 0.45 11.1 3.2 2.7 8.6 2.0 2.8 2 0 0 2 2 2 0 YtxH-like protein Robl_LC7 PF03259.17 gi|156937720|ref|YP_001435516.1| - 1.8e-11 43.7 0.6 2.7e-11 43.1 0.6 1.1 1 0 0 1 1 1 1 Roadblock/LC7 domain MAPKK1_Int PF08923.10 gi|156937720|ref|YP_001435516.1| - 0.0021 17.8 0.0 0.0027 17.5 0.0 1.1 1 0 0 1 1 1 1 Mitogen-activated protein kinase kinase 1 interacting RNA_pol_Rpo13 PF12136.8 gi|156937721|ref|YP_001435517.1| - 4.9e-18 64.8 3.5 8.7e-18 64.0 3.5 1.4 1 0 0 1 1 1 1 RNA polymerase Rpo13 subunit HTH domain Aconitase PF00330.20 gi|156937722|ref|YP_001435518.1| - 2e-102 343.6 7.6 3.1e-100 336.4 7.6 2.5 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|156937722|ref|YP_001435518.1| - 0.012 14.4 0.0 0.02 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF521) Herpes_U44 PF04533.13 gi|156937722|ref|YP_001435518.1| - 0.12 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 Herpes virus U44 protein Flavoprotein PF02441.19 gi|156937723|ref|YP_001435519.1| - 2.2e-15 56.8 0.0 2.9e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 Flavoprotein Fer4 PF00037.27 gi|156937723|ref|YP_001435519.1| - 7.4e-08 31.9 16.9 5.9e-07 29.0 2.6 3.3 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_9 PF13187.6 gi|156937723|ref|YP_001435519.1| - 1.1e-07 31.9 9.5 1.8e-07 31.2 9.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937723|ref|YP_001435519.1| - 1.2e-05 26.1 7.2 0.0034 18.3 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|156937723|ref|YP_001435519.1| - 0.00013 22.4 6.8 0.084 13.4 1.4 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937723|ref|YP_001435519.1| - 0.00015 21.7 15.5 0.0023 17.9 2.6 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156937723|ref|YP_001435519.1| - 0.00019 21.9 15.0 0.00021 21.8 13.1 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156937723|ref|YP_001435519.1| - 0.0003 20.8 15.2 0.00048 20.2 15.2 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|156937723|ref|YP_001435519.1| - 0.0018 18.4 17.0 0.011 15.9 14.4 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156937723|ref|YP_001435519.1| - 0.0078 16.2 1.9 0.0078 16.2 1.9 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156937723|ref|YP_001435519.1| - 0.008 16.6 3.2 0.008 16.6 3.2 2.8 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|156937723|ref|YP_001435519.1| - 0.1 13.1 1.7 0.1 13.1 1.7 2.3 1 1 2 3 3 2 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156937723|ref|YP_001435519.1| - 0.27 12.3 18.1 0.7 11.0 6.8 3.4 2 1 0 2 2 2 0 4Fe-4S binding domain AAA PF00004.29 gi|156937725|ref|YP_001435521.1| - 2e-22 80.0 0.0 4.9e-22 78.8 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|156937725|ref|YP_001435521.1| - 8.3e-05 22.6 2.1 0.00067 19.6 0.1 2.8 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 gi|156937725|ref|YP_001435521.1| - 9e-05 22.8 0.3 0.34 11.2 0.1 2.8 1 1 1 2 2 2 2 AAA domain Bac_DnaA PF00308.18 gi|156937725|ref|YP_001435521.1| - 0.00016 21.6 0.0 0.00041 20.3 0.0 1.6 1 1 0 1 1 1 1 Bacterial dnaA protein AAA_16 PF13191.6 gi|156937725|ref|YP_001435521.1| - 0.00025 21.5 0.5 0.0059 17.0 0.5 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|156937725|ref|YP_001435521.1| - 0.0027 17.9 0.0 0.015 15.5 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|156937725|ref|YP_001435521.1| - 0.0031 17.5 1.2 0.013 15.5 1.2 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 gi|156937725|ref|YP_001435521.1| - 0.0051 16.7 0.1 1.6 8.6 0.0 2.5 2 1 0 2 2 2 1 Rad17 P-loop domain AAA_28 PF13521.6 gi|156937725|ref|YP_001435521.1| - 0.019 15.2 0.2 0.22 11.8 0.1 2.5 2 1 0 2 2 1 0 AAA domain DUF815 PF05673.13 gi|156937725|ref|YP_001435521.1| - 0.021 14.0 0.1 0.067 12.3 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF815) AAA_14 PF13173.6 gi|156937725|ref|YP_001435521.1| - 0.027 14.5 0.0 0.42 10.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain RuvB_N PF05496.12 gi|156937725|ref|YP_001435521.1| - 0.029 14.1 0.0 0.091 12.5 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 gi|156937725|ref|YP_001435521.1| - 0.031 13.8 0.0 0.06 12.8 0.0 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_18 PF13238.6 gi|156937725|ref|YP_001435521.1| - 0.035 14.7 0.0 0.13 12.8 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|156937725|ref|YP_001435521.1| - 0.039 13.7 0.0 0.085 12.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain GlutR_dimer PF00745.20 gi|156937725|ref|YP_001435521.1| - 0.048 14.1 0.7 0.17 12.4 0.2 2.2 1 1 1 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain IstB_IS21 PF01695.17 gi|156937725|ref|YP_001435521.1| - 0.073 12.8 0.0 0.18 11.5 0.0 1.8 1 0 0 1 1 1 0 IstB-like ATP binding protein NACHT PF05729.12 gi|156937725|ref|YP_001435521.1| - 0.11 12.4 0.5 0.5 10.3 0.1 2.1 2 0 0 2 2 2 0 NACHT domain Zeta_toxin PF06414.12 gi|156937725|ref|YP_001435521.1| - 0.11 11.7 0.0 0.31 10.3 0.0 1.7 1 0 0 1 1 1 0 Zeta toxin FeoB_N PF02421.18 gi|156937725|ref|YP_001435521.1| - 0.12 11.9 0.1 11 5.5 0.1 2.5 1 1 1 2 2 2 0 Ferrous iron transport protein B Mg_chelatase PF01078.21 gi|156937725|ref|YP_001435521.1| - 0.12 11.7 0.3 0.24 10.7 0.3 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 gi|156937725|ref|YP_001435521.1| - 0.12 11.5 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 TIP49 P-loop domain DMRL_synthase PF00885.19 gi|156937727|ref|YP_001435523.1| - 1.2e-40 138.6 0.1 1.4e-40 138.4 0.1 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase ADSL_C PF10397.9 gi|156937727|ref|YP_001435523.1| - 0.037 14.6 0.1 0.28 11.8 0.1 2.4 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminus Methyltransf_24 PF13578.6 gi|156937728|ref|YP_001435524.1| - 5.1e-11 43.5 0.0 8.9e-11 42.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|156937728|ref|YP_001435524.1| - 4.2e-08 32.6 0.0 5.1e-08 32.3 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_25 PF13649.6 gi|156937728|ref|YP_001435524.1| - 0.0018 18.9 0.0 0.0028 18.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|156937728|ref|YP_001435524.1| - 0.14 11.5 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase tRNA-synt_1 PF00133.22 gi|156937729|ref|YP_001435525.1| - 1.8e-27 95.8 0.0 3.6e-25 88.3 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|156937729|ref|YP_001435525.1| - 5.1e-07 28.8 0.0 4.6e-05 22.3 0.0 2.9 2 1 0 2 2 2 1 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|156937729|ref|YP_001435525.1| - 6.3e-05 22.6 0.0 0.00012 21.7 0.0 1.4 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 Anticodon_1 PF08264.13 gi|156937729|ref|YP_001435525.1| - 0.00024 21.1 0.0 0.0022 18.0 0.0 2.3 1 1 1 2 2 2 1 Anticodon-binding domain of tRNA 7TMR-HDED PF07697.11 gi|156937729|ref|YP_001435525.1| - 0.0051 17.0 0.7 0.018 15.2 0.4 2.0 2 1 0 2 2 2 1 7TM-HD extracellular HEAT_PBS PF03130.16 gi|156937729|ref|YP_001435525.1| - 0.14 12.9 0.3 1.7 9.5 0.1 3.0 2 0 0 2 2 2 0 PBS lyase HEAT-like repeat Ku_C PF03730.14 gi|156937729|ref|YP_001435525.1| - 0.16 12.7 1.8 27 5.6 0.2 3.6 3 0 0 3 3 3 0 Ku70/Ku80 C-terminal arm Dynein_light PF01221.18 gi|156937729|ref|YP_001435525.1| - 0.19 12.0 0.0 0.69 10.3 0.0 1.9 1 0 0 1 1 1 0 Dynein light chain type 1 FUSC PF04632.12 gi|156937729|ref|YP_001435525.1| - 0.7 8.4 1.9 1 7.8 1.9 1.1 1 0 0 1 1 1 0 Fusaric acid resistance protein family Isy1 PF06246.12 gi|156937730|ref|YP_001435526.1| - 0.035 13.7 0.1 0.037 13.6 0.1 1.1 1 0 0 1 1 1 0 Isy1-like splicing family DSPc PF00782.20 gi|156937731|ref|YP_001435527.1| - 0.17 11.7 0.0 0.95 9.3 0.0 1.9 2 0 0 2 2 2 0 Dual specificity phosphatase, catalytic domain Met_10 PF02475.16 gi|156937732|ref|YP_001435528.1| - 4.2e-44 150.7 0.0 8.6e-44 149.7 0.0 1.4 2 0 0 2 2 2 1 Met-10+ like-protein PrmA PF06325.13 gi|156937732|ref|YP_001435528.1| - 2.5e-05 23.8 0.0 3.5e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_15 PF09445.10 gi|156937732|ref|YP_001435528.1| - 0.00054 19.6 0.0 0.00074 19.1 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase TRM PF02005.16 gi|156937732|ref|YP_001435528.1| - 0.0034 16.6 0.0 0.0046 16.2 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltr_RsmB-F PF01189.17 gi|156937732|ref|YP_001435528.1| - 0.006 16.3 0.0 0.0091 15.6 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F MTS PF05175.14 gi|156937732|ref|YP_001435528.1| - 0.013 15.0 0.0 0.02 14.5 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|156937732|ref|YP_001435528.1| - 0.076 13.7 0.0 0.14 12.9 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain ADH_zinc_N PF00107.26 gi|156937732|ref|YP_001435528.1| - 0.15 12.0 0.0 0.33 10.9 0.0 1.7 2 1 0 2 2 2 0 Zinc-binding dehydrogenase MethyltransfD12 PF02086.15 gi|156937732|ref|YP_001435528.1| - 0.23 11.1 0.0 0.33 10.6 0.0 1.1 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase DNA_ligase_A_M PF01068.21 gi|156937733|ref|YP_001435529.1| - 9.9e-62 208.2 0.0 1.6e-61 207.5 0.0 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|156937733|ref|YP_001435529.1| - 4.9e-43 147.5 0.2 6.1e-42 143.9 0.2 1.9 1 1 1 2 2 2 2 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|156937733|ref|YP_001435529.1| - 5.7e-26 91.0 0.0 1.2e-25 90.0 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.6 gi|156937733|ref|YP_001435529.1| - 0.00033 20.6 0.1 0.017 15.1 0.0 2.5 2 0 0 2 2 2 1 DNA ligase OB-like domain DUF5591 PF17884.1 gi|156937733|ref|YP_001435529.1| - 0.1 12.5 0.0 3.2 7.6 0.0 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5591) DUF1297 PF06973.12 gi|156937734|ref|YP_001435530.1| - 7.9e-81 270.1 0.0 1.1e-80 269.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|156937734|ref|YP_001435530.1| - 3.6e-50 169.0 0.0 5.5e-50 168.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) Aminotran_3 PF00202.21 gi|156937735|ref|YP_001435531.1| - 1.7e-94 316.7 0.0 2.3e-94 316.3 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_5 PF00266.19 gi|156937735|ref|YP_001435531.1| - 0.037 13.0 0.0 0.13 11.2 0.0 1.8 2 0 0 2 2 2 0 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|156937735|ref|YP_001435531.1| - 0.084 11.4 0.0 0.11 11.0 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme DUF3198 PF11433.8 gi|156937735|ref|YP_001435531.1| - 0.1 12.5 0.5 0.74 9.7 0.2 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3198) Aminotran_5 PF00266.19 gi|156937737|ref|YP_001435533.1| - 6.3e-39 134.0 0.0 8.1e-39 133.6 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|156937737|ref|YP_001435533.1| - 2e-07 30.6 0.9 3.2e-07 29.9 0.9 1.3 1 1 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|156937737|ref|YP_001435533.1| - 9.7e-07 28.3 0.0 1.4e-06 27.7 0.0 1.2 1 0 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|156937737|ref|YP_001435533.1| - 1.4e-05 23.8 0.2 2e-05 23.3 0.2 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme 2-Hacid_dh_C PF02826.19 gi|156937737|ref|YP_001435533.1| - 0.034 13.5 0.2 0.17 11.2 0.1 2.0 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Oxidored_nitro PF00148.19 gi|156937737|ref|YP_001435533.1| - 0.039 12.7 0.5 0.062 12.0 0.5 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase Pyridoxal_deC PF00282.19 gi|156937737|ref|YP_001435533.1| - 0.11 11.2 0.0 0.16 10.7 0.0 1.4 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain DUF3496 PF12001.8 gi|156937737|ref|YP_001435533.1| - 0.14 12.6 0.4 0.26 11.7 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3496) SAM_adeno_trans PF01887.16 gi|156937738|ref|YP_001435534.1| - 5.4e-70 235.5 0.0 6.1e-70 235.3 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase CTP_transf_like PF01467.26 gi|156937739|ref|YP_001435535.1| - 8.6e-15 55.2 0.0 1.4e-14 54.5 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|156937739|ref|YP_001435535.1| - 0.18 11.0 0.0 2.1 7.5 0.0 2.0 2 0 0 2 2 2 0 HIGH Nucleotidyl Transferase FeS_assembly_P PF01883.19 gi|156937740|ref|YP_001435536.1| - 5.7e-19 68.1 0.2 7.1e-19 67.8 0.2 1.1 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein Germane PF10646.9 gi|156937740|ref|YP_001435536.1| - 0.14 13.0 0.0 0.23 12.3 0.0 1.2 1 0 0 1 1 1 0 Sporulation and spore germination BON PF04972.17 gi|156937740|ref|YP_001435536.1| - 0.18 12.2 0.7 0.76 10.1 0.0 2.2 3 0 0 3 3 3 0 BON domain DUF2518 PF10726.9 gi|156937741|ref|YP_001435537.1| - 0.11 12.2 0.1 0.11 12.2 0.1 1.7 2 0 0 2 2 2 0 Protein of function (DUF2518) DUF2953 PF11167.8 gi|156937741|ref|YP_001435537.1| - 0.76 9.9 3.2 2.9 8.1 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) tRNA_anti-codon PF01336.25 gi|156937744|ref|YP_001435540.1| - 2e-10 40.5 2.9 4.3e-10 39.4 2.5 1.7 1 1 1 2 2 2 2 OB-fold nucleic acid binding domain GTP_EFTU_D2 PF03144.25 gi|156937744|ref|YP_001435540.1| - 0.0032 17.8 0.8 0.1 13.0 0.0 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 2 REPA_OB_2 PF16900.5 gi|156937744|ref|YP_001435540.1| - 0.0072 16.2 0.9 0.0094 15.9 0.9 1.2 1 0 0 1 1 1 1 Replication protein A OB domain CDC24_OB3 PF17244.2 gi|156937744|ref|YP_001435540.1| - 0.033 13.9 0.0 0.038 13.7 0.0 1.1 1 0 0 1 1 1 0 Cell division control protein 24, OB domain 3 DUF4131 PF13567.6 gi|156937744|ref|YP_001435540.1| - 0.034 13.8 0.9 0.055 13.1 0.6 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4131) POT1 PF02765.17 gi|156937744|ref|YP_001435540.1| - 0.061 13.2 0.0 0.35 10.7 0.0 1.9 1 1 0 1 1 1 0 Telomeric single stranded DNA binding POT1/CDC13 HTH_45 PF14947.6 gi|156937745|ref|YP_001435541.1| - 1.8e-06 27.8 0.0 2.2e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix Mrr_N PF14338.6 gi|156937745|ref|YP_001435541.1| - 0.031 14.4 0.2 0.087 13.0 0.2 1.7 2 0 0 2 2 2 0 Mrr N-terminal domain DUF3116 PF11313.8 gi|156937745|ref|YP_001435541.1| - 0.032 14.1 0.6 0.048 13.5 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Topoisom_bac PF01131.20 gi|156937745|ref|YP_001435541.1| - 0.075 12.0 0.1 0.088 11.8 0.1 1.0 1 0 0 1 1 1 0 DNA topoisomerase MarR_2 PF12802.7 gi|156937745|ref|YP_001435541.1| - 0.092 12.6 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 MarR family Multi-haem_cyto PF13447.6 gi|156937746|ref|YP_001435542.1| - 5.7e-17 61.8 16.6 7.2e-14 51.7 2.1 4.1 3 1 1 4 4 4 2 Seven times multi-haem cytochrome CxxCH Cytochrome_C7 PF14522.6 gi|156937746|ref|YP_001435542.1| - 7e-11 42.0 17.2 0.004 17.1 0.4 5.5 2 1 2 4 4 4 4 Cytochrome c7 and related cytochrome c Cytochrome_C554 PF13435.6 gi|156937746|ref|YP_001435542.1| - 2.8e-10 41.0 28.5 0.00012 23.0 0.5 6.0 5 1 0 5 5 5 3 Cytochrome c554 and c-prime Cytochrom_c3_2 PF14537.6 gi|156937746|ref|YP_001435542.1| - 8.8e-08 32.5 18.7 0.00086 19.7 4.8 5.6 3 1 1 4 4 4 1 Cytochrome c3 Paired_CXXCH_1 PF09699.10 gi|156937746|ref|YP_001435542.1| - 0.00013 21.6 31.7 4.8 7.0 0.0 7.5 6 2 0 6 6 6 3 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_C552 PF02335.15 gi|156937746|ref|YP_001435542.1| - 0.0021 17.1 0.2 0.0021 17.1 0.2 4.4 2 1 2 4 4 4 1 Cytochrome c552 Cytochrom_CIII PF02085.16 gi|156937746|ref|YP_001435542.1| - 0.024 15.0 27.0 0.88 9.9 2.4 5.3 3 2 0 4 4 4 0 Class III cytochrome C family Cytochrome_CBB3 PF13442.6 gi|156937746|ref|YP_001435542.1| - 0.26 11.6 28.8 8.3 6.8 0.0 7.9 4 3 3 7 7 7 0 Cytochrome C oxidase, cbb3-type, subunit III RibD_C PF01872.17 gi|156937747|ref|YP_001435543.1| - 5e-34 117.9 0.0 6.2e-34 117.6 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain AAA_18 PF13238.6 gi|156937748|ref|YP_001435544.1| - 6.4e-05 23.5 0.5 0.00055 20.5 0.4 2.3 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|156937748|ref|YP_001435544.1| - 0.00013 22.1 0.0 0.00019 21.6 0.0 1.3 1 0 0 1 1 1 1 Shikimate kinase CPT PF07931.12 gi|156937748|ref|YP_001435544.1| - 0.0064 16.4 0.3 0.065 13.1 0.0 2.4 2 1 1 3 3 3 1 Chloramphenicol phosphotransferase-like protein RNA_binding PF01877.17 gi|156937749|ref|YP_001435545.1| - 7.9e-17 61.6 0.0 1.7e-16 60.6 0.0 1.6 1 1 0 1 1 1 1 RNA binding Radical_SAM PF04055.21 gi|156937750|ref|YP_001435546.1| - 2.7e-16 60.4 0.0 1.2e-15 58.3 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|156937750|ref|YP_001435546.1| - 0.027 14.5 0.0 0.063 13.3 0.0 1.6 1 0 0 1 1 1 0 B12 binding domain Prismane PF03063.20 gi|156937751|ref|YP_001435547.1| - 8.4e-113 377.8 0.0 1.8e-98 330.5 0.0 2.0 1 1 1 2 2 2 2 Prismane/CO dehydrogenase family ILVD_EDD PF00920.21 gi|156937752|ref|YP_001435548.1| - 3.7e-221 735.2 0.1 4.3e-221 735.0 0.1 1.0 1 0 0 1 1 1 1 Dehydratase family MMPL PF03176.15 gi|156937753|ref|YP_001435549.1| - 2.3e-56 191.1 14.5 1.9e-36 125.6 1.3 2.5 2 0 0 2 2 2 2 MMPL family ACR_tran PF00873.19 gi|156937753|ref|YP_001435549.1| - 1.3e-09 36.3 2.2 1.3e-09 36.3 2.2 2.0 2 0 0 2 2 2 1 AcrB/AcrD/AcrF family CnrY PF17524.2 gi|156937753|ref|YP_001435549.1| - 0.045 14.0 0.6 0.045 14.0 0.6 3.6 3 0 0 3 3 3 0 Anti-sigma factor CnrY TIP49 PF06068.13 gi|156937754|ref|YP_001435550.1| - 3.3e-131 437.7 0.3 4.2e-131 437.3 0.3 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 gi|156937754|ref|YP_001435550.1| - 3.7e-23 81.4 0.1 9.5e-23 80.1 0.1 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 gi|156937754|ref|YP_001435550.1| - 1.6e-10 41.5 0.1 5.1e-07 30.2 0.1 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|156937754|ref|YP_001435550.1| - 1.5e-09 37.8 0.3 3.9e-07 29.9 0.1 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|156937754|ref|YP_001435550.1| - 2.7e-08 34.4 0.8 3.4e-07 30.8 0.8 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|156937754|ref|YP_001435550.1| - 6.2e-07 29.8 0.1 0.039 14.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|156937754|ref|YP_001435550.1| - 0.00038 20.5 0.6 0.0034 17.4 0.1 2.6 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|156937754|ref|YP_001435550.1| - 0.00097 19.3 0.1 0.0074 16.5 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_lid_2 PF17863.1 gi|156937754|ref|YP_001435550.1| - 0.002 17.9 0.1 0.0043 16.8 0.1 1.5 1 0 0 1 1 1 1 AAA lid domain AAA_7 PF12775.7 gi|156937754|ref|YP_001435550.1| - 0.0024 17.4 0.1 0.0084 15.6 0.0 1.8 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_18 PF13238.6 gi|156937754|ref|YP_001435550.1| - 0.0026 18.3 0.1 0.0078 16.8 0.1 1.9 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|156937754|ref|YP_001435550.1| - 0.0034 17.0 0.0 0.0073 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|156937754|ref|YP_001435550.1| - 0.0052 16.2 2.3 0.0073 15.7 0.7 1.9 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|156937754|ref|YP_001435550.1| - 0.0054 16.5 0.1 0.011 15.4 0.1 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_11 PF13086.6 gi|156937754|ref|YP_001435550.1| - 0.0059 16.4 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_32 PF13654.6 gi|156937754|ref|YP_001435550.1| - 0.0068 15.2 0.4 0.54 9.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain Sigma54_activat PF00158.26 gi|156937754|ref|YP_001435550.1| - 0.012 15.3 0.3 0.12 12.0 0.1 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain NACHT PF05729.12 gi|156937754|ref|YP_001435550.1| - 0.014 15.3 0.1 0.036 14.0 0.1 1.7 1 0 0 1 1 1 0 NACHT domain AAA_28 PF13521.6 gi|156937754|ref|YP_001435550.1| - 0.015 15.6 0.3 0.065 13.5 0.1 2.1 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 gi|156937754|ref|YP_001435550.1| - 0.025 13.9 0.1 0.053 12.9 0.1 1.7 1 0 0 1 1 1 0 KaiC AAA_17 PF13207.6 gi|156937754|ref|YP_001435550.1| - 0.04 14.3 1.1 0.15 12.5 0.1 2.5 3 0 0 3 3 2 0 AAA domain PhoH PF02562.16 gi|156937754|ref|YP_001435550.1| - 0.045 13.2 0.2 0.1 12.1 0.2 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_30 PF13604.6 gi|156937754|ref|YP_001435550.1| - 0.054 13.2 0.2 0.37 10.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 gi|156937754|ref|YP_001435550.1| - 0.057 13.7 3.2 0.28 11.5 0.6 2.6 3 0 0 3 3 3 0 AAA domain DUF2075 PF09848.9 gi|156937754|ref|YP_001435550.1| - 0.077 12.2 0.1 0.15 11.3 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) IPT PF01745.16 gi|156937754|ref|YP_001435550.1| - 0.084 12.3 0.0 0.25 10.7 0.0 1.7 2 0 0 2 2 2 0 Isopentenyl transferase Mg_chelatase_C PF13335.6 gi|156937754|ref|YP_001435550.1| - 0.09 13.4 0.1 0.21 12.2 0.1 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI C-terminal TsaE PF02367.17 gi|156937754|ref|YP_001435550.1| - 0.11 12.5 0.2 0.27 11.2 0.2 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TAF PF02969.17 gi|156937754|ref|YP_001435550.1| - 0.11 12.6 1.0 0.41 10.9 0.2 2.4 2 0 0 2 2 1 0 TATA box binding protein associated factor (TAF) RNA_helicase PF00910.22 gi|156937754|ref|YP_001435550.1| - 0.15 12.5 0.0 0.26 11.7 0.0 1.4 1 0 0 1 1 1 0 RNA helicase Ribosomal_L3 PF00297.22 gi|156937755|ref|YP_001435551.1| - 1.7e-66 224.7 0.3 2.9e-66 224.0 0.3 1.4 1 1 0 1 1 1 1 Ribosomal protein L3 DUF5551 PF17705.1 gi|156937755|ref|YP_001435551.1| - 0.26 10.9 1.1 0.43 10.2 0.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5551) Ribosomal_L4 PF00573.22 gi|156937756|ref|YP_001435552.1| - 2.6e-40 138.2 0.3 3.2e-40 137.9 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L23 PF00276.20 gi|156937757|ref|YP_001435553.1| - 9.9e-22 77.1 4.1 4.2e-21 75.1 4.1 1.7 1 1 0 1 1 1 1 Ribosomal protein L23 T6SS_HCP PF05638.12 gi|156937757|ref|YP_001435553.1| - 0.12 12.8 0.2 0.14 12.5 0.2 1.1 1 0 0 1 1 1 0 Type VI secretion system effector, Hcp DUF3488 PF11992.8 gi|156937758|ref|YP_001435554.1| - 0.035 13.1 0.1 0.036 13.0 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3488) DUF3267 PF11667.8 gi|156937758|ref|YP_001435554.1| - 0.071 13.4 1.5 0.084 13.2 1.5 1.1 1 0 0 1 1 1 0 Putative zincin peptidase DUF3211 PF11485.8 gi|156937758|ref|YP_001435554.1| - 0.4 10.9 0.2 0.4 10.9 0.2 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3211) APS_kinase PF01583.20 gi|156937759|ref|YP_001435555.1| - 3.5e-62 209.0 0.0 4e-62 208.8 0.0 1.0 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_33 PF13671.6 gi|156937759|ref|YP_001435555.1| - 1.8e-10 41.1 0.0 2.5e-10 40.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain KTI12 PF08433.10 gi|156937759|ref|YP_001435555.1| - 6.7e-10 38.9 0.0 7.7e-10 38.7 0.0 1.1 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_18 PF13238.6 gi|156937759|ref|YP_001435555.1| - 4.6e-09 36.9 0.0 7.4e-09 36.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|156937759|ref|YP_001435555.1| - 8.4e-06 25.8 0.0 1.6e-05 24.9 0.0 1.5 1 0 0 1 1 1 1 NTPase AAA_17 PF13207.6 gi|156937759|ref|YP_001435555.1| - 9.9e-06 26.0 0.0 1.9e-05 25.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|156937759|ref|YP_001435555.1| - 2.9e-05 23.2 0.0 4.3e-05 22.6 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA PF00004.29 gi|156937759|ref|YP_001435555.1| - 0.00027 21.4 0.0 0.0004 20.8 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|156937759|ref|YP_001435555.1| - 0.00051 20.0 0.1 0.001 19.0 0.1 1.5 1 0 0 1 1 1 1 NACHT domain AAA_22 PF13401.6 gi|156937759|ref|YP_001435555.1| - 0.00052 20.3 0.1 0.00085 19.6 0.1 1.5 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 gi|156937759|ref|YP_001435555.1| - 0.00053 19.6 0.0 0.00063 19.4 0.0 1.2 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|156937759|ref|YP_001435555.1| - 0.00069 20.0 0.0 0.0012 19.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 gi|156937759|ref|YP_001435555.1| - 0.0007 19.4 0.0 0.0009 19.0 0.0 1.2 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|156937759|ref|YP_001435555.1| - 0.00071 19.3 0.0 0.0011 18.6 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain CbiA PF01656.23 gi|156937759|ref|YP_001435555.1| - 0.0015 18.6 0.1 0.0027 17.7 0.1 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Zeta_toxin PF06414.12 gi|156937759|ref|YP_001435555.1| - 0.0015 17.9 0.0 0.0021 17.4 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin MobB PF03205.14 gi|156937759|ref|YP_001435555.1| - 0.0015 18.4 0.0 0.0023 17.8 0.0 1.3 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B Thymidylate_kin PF02223.17 gi|156937759|ref|YP_001435555.1| - 0.0018 18.0 0.1 0.0043 16.8 0.1 1.6 1 0 0 1 1 1 1 Thymidylate kinase NB-ARC PF00931.22 gi|156937759|ref|YP_001435555.1| - 0.0018 17.5 0.0 0.0023 17.1 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain ParA PF10609.9 gi|156937759|ref|YP_001435555.1| - 0.0046 16.4 0.0 0.006 16.1 0.0 1.2 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_5 PF07728.14 gi|156937759|ref|YP_001435555.1| - 0.009 16.0 0.1 0.018 15.0 0.1 1.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 gi|156937759|ref|YP_001435555.1| - 0.0091 16.0 0.0 0.022 14.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|156937759|ref|YP_001435555.1| - 0.0099 16.4 0.0 0.013 16.0 0.0 1.4 1 1 0 1 1 1 1 ABC transporter dNK PF01712.19 gi|156937759|ref|YP_001435555.1| - 0.01 15.7 0.7 2.2 8.1 0.0 2.8 2 1 0 2 2 2 0 Deoxynucleoside kinase SKI PF01202.22 gi|156937759|ref|YP_001435555.1| - 0.011 15.9 0.4 0.023 14.8 0.4 1.8 1 1 0 1 1 1 0 Shikimate kinase AAA_28 PF13521.6 gi|156937759|ref|YP_001435555.1| - 0.011 16.0 0.0 0.017 15.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|156937759|ref|YP_001435555.1| - 0.013 14.9 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|156937759|ref|YP_001435555.1| - 0.013 15.9 0.0 0.02 15.3 0.0 1.3 1 0 0 1 1 1 0 RNA helicase AAA_31 PF13614.6 gi|156937759|ref|YP_001435555.1| - 0.013 15.4 0.0 0.016 15.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|156937759|ref|YP_001435555.1| - 0.018 14.8 0.0 0.026 14.3 0.0 1.5 1 1 0 1 1 1 0 AAA domain LytR_C PF13399.6 gi|156937759|ref|YP_001435555.1| - 0.022 15.7 0.0 0.034 15.1 0.0 1.4 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator ATPase_2 PF01637.18 gi|156937759|ref|YP_001435555.1| - 0.027 14.4 0.1 0.032 14.2 0.1 1.6 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|156937759|ref|YP_001435555.1| - 0.032 13.8 0.0 0.055 13.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|156937759|ref|YP_001435555.1| - 0.035 13.9 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein Viral_helicase1 PF01443.18 gi|156937759|ref|YP_001435555.1| - 0.044 13.5 0.0 0.085 12.6 0.0 1.5 2 0 0 2 2 1 0 Viral (Superfamily 1) RNA helicase Cytidylate_kin2 PF13189.6 gi|156937759|ref|YP_001435555.1| - 0.046 13.8 0.1 0.33 11.1 0.0 2.1 1 1 1 2 2 2 0 Cytidylate kinase-like family TsaE PF02367.17 gi|156937759|ref|YP_001435555.1| - 0.048 13.7 0.1 0.073 13.1 0.1 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MipZ PF09140.11 gi|156937759|ref|YP_001435555.1| - 0.058 12.7 0.0 0.08 12.2 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ AAA_19 PF13245.6 gi|156937759|ref|YP_001435555.1| - 0.061 13.7 0.0 0.15 12.4 0.0 1.6 2 0 0 2 2 1 0 AAA domain IstB_IS21 PF01695.17 gi|156937759|ref|YP_001435555.1| - 0.094 12.4 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein RuvB_N PF05496.12 gi|156937759|ref|YP_001435555.1| - 0.095 12.4 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ATPase PF06745.13 gi|156937759|ref|YP_001435555.1| - 0.097 12.0 0.1 0.21 10.9 0.0 1.5 2 0 0 2 2 1 0 KaiC CLP1_P PF16575.5 gi|156937759|ref|YP_001435555.1| - 0.1 12.4 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop ArsA_ATPase PF02374.15 gi|156937759|ref|YP_001435555.1| - 0.14 11.3 0.0 0.27 10.4 0.0 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase PIF1 PF05970.14 gi|156937759|ref|YP_001435555.1| - 0.15 11.2 0.0 0.26 10.4 0.0 1.3 1 0 0 1 1 1 0 PIF1-like helicase ADK PF00406.22 gi|156937759|ref|YP_001435555.1| - 0.15 12.2 0.0 0.23 11.6 0.0 1.3 1 0 0 1 1 1 0 Adenylate kinase KAP_NTPase PF07693.14 gi|156937759|ref|YP_001435555.1| - 0.16 11.1 0.0 0.16 11.1 0.0 1.1 1 0 0 1 1 1 0 KAP family P-loop domain AAA_3 PF07726.11 gi|156937759|ref|YP_001435555.1| - 0.18 11.7 0.0 0.23 11.3 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 gi|156937759|ref|YP_001435555.1| - 0.18 11.3 0.0 0.31 10.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region 6PF2K PF01591.18 gi|156937759|ref|YP_001435555.1| - 0.19 11.0 0.0 0.27 10.5 0.0 1.2 1 0 0 1 1 1 0 6-phosphofructo-2-kinase Phosphodiest PF01663.22 gi|156937760|ref|YP_001435556.1| - 1.1e-56 192.9 0.1 1.4e-56 192.6 0.1 1.0 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Sulfatase PF00884.23 gi|156937760|ref|YP_001435556.1| - 0.031 13.7 0.0 0.057 12.8 0.0 1.6 1 1 0 1 1 1 0 Sulfatase SPDY PF03771.16 gi|156937760|ref|YP_001435556.1| - 0.065 13.2 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF317) DUF229 PF02995.17 gi|156937760|ref|YP_001435556.1| - 0.21 10.2 0.0 1.4 7.4 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF229) ATP-sulfurylase PF01747.17 gi|156937761|ref|YP_001435557.1| - 3.8e-90 301.0 0.0 5.1e-90 300.6 0.0 1.2 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 gi|156937761|ref|YP_001435557.1| - 7e-52 175.3 0.0 1e-51 174.7 0.0 1.3 1 0 0 1 1 1 1 PUA-like domain Nudix_N_2 PF14803.6 gi|156937761|ref|YP_001435557.1| - 0.16 11.9 3.4 5.2 7.1 0.9 2.7 2 1 0 2 2 2 0 Nudix N-terminal RHH_1 PF01402.21 gi|156937762|ref|YP_001435558.1| - 0.0028 17.5 1.6 5.3 7.1 0.0 2.6 2 1 0 2 2 2 2 Ribbon-helix-helix protein, copG family Arg_decarbox_C PF17944.1 gi|156937762|ref|YP_001435558.1| - 0.021 15.4 2.0 0.033 14.8 1.6 1.6 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension DUF2520 PF10728.9 gi|156937762|ref|YP_001435558.1| - 0.082 12.7 0.0 0.092 12.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2520) Sulfatase PF00884.23 gi|156937764|ref|YP_001435560.1| - 0.0051 16.2 0.0 0.026 13.9 0.0 2.1 1 1 0 1 1 1 1 Sulfatase Cupin_2 PF07883.11 gi|156937765|ref|YP_001435561.1| - 2.1e-10 40.2 0.0 2.7e-10 39.8 0.0 1.2 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|156937765|ref|YP_001435561.1| - 2.5e-07 30.7 0.4 2.6e-07 30.6 0.4 1.0 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Lyx_isomer PF07385.12 gi|156937765|ref|YP_001435561.1| - 6.4e-06 25.6 0.4 0.041 13.1 0.1 2.1 1 1 1 2 2 2 2 D-lyxose isomerase AraC_binding PF02311.19 gi|156937765|ref|YP_001435561.1| - 0.00022 21.2 0.0 0.00028 20.8 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Ectoine_synth PF06339.12 gi|156937765|ref|YP_001435561.1| - 0.01 16.0 0.0 0.012 15.9 0.0 1.1 1 0 0 1 1 1 0 Ectoine synthase PBP_like_2 PF12849.7 gi|156937766|ref|YP_001435562.1| - 1.7e-50 172.3 0.4 2.1e-50 172.0 0.4 1.0 1 0 0 1 1 1 1 PBP superfamily domain SBP_bac_1 PF01547.25 gi|156937766|ref|YP_001435562.1| - 2.5e-15 57.3 3.4 8.7e-15 55.5 3.4 1.8 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein PBP_like PF12727.7 gi|156937766|ref|YP_001435562.1| - 3.7e-09 36.0 0.0 8.6e-09 34.8 0.0 1.6 1 1 0 1 1 1 1 PBP superfamily domain SBP_bac_8 PF13416.6 gi|156937766|ref|YP_001435562.1| - 2.6e-05 24.2 0.9 0.00011 22.1 0.9 1.9 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_11 PF13531.6 gi|156937766|ref|YP_001435562.1| - 0.00018 21.3 0.2 0.00041 20.2 0.2 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein Lactamase_B_2 PF12706.7 gi|156937767|ref|YP_001435563.1| - 4.9e-05 22.9 0.0 8.4e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156937767|ref|YP_001435563.1| - 8.7e-05 22.6 0.1 0.00017 21.7 0.1 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily ResIII PF04851.15 gi|156937768|ref|YP_001435564.1| - 1.3e-15 57.8 0.0 2.4e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|156937768|ref|YP_001435564.1| - 9.9e-11 42.0 0.0 2.1e-10 40.9 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|156937768|ref|YP_001435564.1| - 1e-05 25.4 0.2 0.00022 21.0 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase AAA_19 PF13245.6 gi|156937768|ref|YP_001435564.1| - 4.8e-05 23.7 0.2 0.00015 22.1 0.2 1.8 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|156937768|ref|YP_001435564.1| - 0.00033 20.1 0.2 0.00058 19.3 0.2 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain HAD_2 PF13419.6 gi|156937768|ref|YP_001435564.1| - 0.0028 17.8 0.0 0.009 16.1 0.0 1.8 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase AAA_22 PF13401.6 gi|156937768|ref|YP_001435564.1| - 0.005 17.1 0.1 0.023 15.0 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156937768|ref|YP_001435564.1| - 0.006 16.3 0.8 0.016 14.9 0.8 1.7 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 gi|156937768|ref|YP_001435564.1| - 0.011 15.5 0.1 0.047 13.5 0.1 2.1 1 0 0 1 1 1 0 Helicase IstB_IS21 PF01695.17 gi|156937768|ref|YP_001435564.1| - 0.014 15.2 0.3 1.2 8.8 0.1 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein PhoH PF02562.16 gi|156937768|ref|YP_001435564.1| - 0.019 14.4 2.3 0.091 12.2 2.3 2.0 1 1 0 1 1 1 0 PhoH-like protein EF-hand_10 PF14788.6 gi|156937768|ref|YP_001435564.1| - 4.9 7.1 5.9 1.2 9.0 0.1 2.8 3 0 0 3 3 3 0 EF hand LSM PF01423.22 gi|156937769|ref|YP_001435565.1| - 8.2e-20 70.3 0.1 9.1e-20 70.1 0.1 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|156937769|ref|YP_001435565.1| - 0.0016 18.6 0.0 0.0017 18.5 0.0 1.1 1 0 0 1 1 1 1 Ataxin 2 SM domain Ribosomal_L37e PF01907.19 gi|156937770|ref|YP_001435566.1| - 6.6e-25 87.0 13.8 7.5e-25 86.9 13.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e DUF35_N PF12172.8 gi|156937770|ref|YP_001435566.1| - 1.2 9.1 8.2 2.5 8.1 8.2 1.5 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Proteasome PF00227.26 gi|156937771|ref|YP_001435567.1| - 1.6e-54 184.3 0.4 1.8e-54 184.1 0.4 1.0 1 0 0 1 1 1 1 Proteasome subunit PsaN PF05479.11 gi|156937771|ref|YP_001435567.1| - 0.045 13.9 1.0 0.045 13.9 1.0 1.5 2 0 0 2 2 2 0 Photosystem I reaction centre subunit N (PSAN or PSI-N) Binary_toxB PF03495.14 gi|156937772|ref|YP_001435568.1| - 2.6e-23 82.0 106.0 0.00068 19.8 4.2 13.6 3 3 12 17 17 17 15 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain Spermine_synt_N PF17284.2 gi|156937772|ref|YP_001435568.1| - 1.7e-08 34.2 7.1 1.1e+02 2.7 0.0 12.6 15 0 0 15 15 15 0 Spermidine synthase tetramerisation domain V_ATPase_prox PF18274.1 gi|156937772|ref|YP_001435568.1| - 2.3e-05 24.2 0.0 17 5.5 0.0 7.3 9 0 0 9 9 9 1 Vacuolar ATPase Subunit I N-terminal proximal lobe Iso_dh PF00180.20 gi|156937773|ref|YP_001435569.1| - 3.3e-100 335.6 0.1 4.1e-100 335.3 0.1 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase PdxA PF04166.12 gi|156937773|ref|YP_001435569.1| - 0.008 15.6 0.9 0.012 15.1 0.1 1.7 2 0 0 2 2 2 1 Pyridoxal phosphate biosynthetic protein PdxA HMGL-like PF00682.19 gi|156937774|ref|YP_001435570.1| - 2.2e-91 306.1 2.1 3.5e-91 305.4 2.1 1.3 1 0 0 1 1 1 1 HMGL-like Radical_SAM PF04055.21 gi|156937774|ref|YP_001435570.1| - 0.022 15.1 0.2 0.57 10.6 0.1 2.6 2 1 0 2 2 2 0 Radical SAM superfamily DUF5486 PF17588.2 gi|156937774|ref|YP_001435570.1| - 0.083 12.8 0.1 0.16 11.9 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5486) PsiE PF06146.12 gi|156937776|ref|YP_001435572.1| - 9.5e-06 25.9 5.5 9.5e-06 25.9 5.5 1.7 2 0 0 2 2 2 1 Phosphate-starvation-inducible E HAD PF12710.7 gi|156937777|ref|YP_001435573.1| - 7.5e-12 46.0 0.0 1e-11 45.6 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|156937777|ref|YP_001435573.1| - 1.4e-11 45.1 0.1 1.2e-10 42.0 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|156937777|ref|YP_001435573.1| - 3.1e-07 30.6 0.0 5.2e-07 29.9 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|156937777|ref|YP_001435573.1| - 1.5e-05 24.9 0.0 3.9e-05 23.5 0.0 1.7 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase EnY2 PF10163.9 gi|156937777|ref|YP_001435573.1| - 0.012 16.0 0.1 0.022 15.1 0.1 1.4 1 0 0 1 1 1 0 Transcription factor e(y)2 S6PP PF05116.13 gi|156937777|ref|YP_001435573.1| - 0.035 13.6 0.1 0.42 10.1 0.0 2.1 1 1 1 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase DUF2608 PF11019.8 gi|156937777|ref|YP_001435573.1| - 0.11 11.9 0.5 6.1 6.3 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF2608) DUF3140 PF11338.8 gi|156937777|ref|YP_001435573.1| - 0.14 12.6 0.1 0.31 11.5 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3140) Hydrolase_6 PF13344.6 gi|156937777|ref|YP_001435573.1| - 0.14 12.3 0.0 5.5 7.2 0.0 2.3 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase RNA_pol_Rpb4 PF03874.16 gi|156937778|ref|YP_001435574.1| - 6.6e-05 23.2 3.0 0.00033 21.0 3.0 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb4 cwf21 PF08312.12 gi|156937778|ref|YP_001435574.1| - 0.54 10.5 6.5 0.17 12.1 3.2 2.0 2 2 0 2 2 2 0 cwf21 domain TBP PF00352.21 gi|156937779|ref|YP_001435575.1| - 1.3e-63 210.9 0.5 1.3e-30 105.1 0.1 2.1 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|156937779|ref|YP_001435575.1| - 2.4e-08 34.0 0.0 0.0045 17.1 0.0 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF3378) Spore_YhaL PF14147.6 gi|156937779|ref|YP_001435575.1| - 0.045 13.5 2.2 5.8 6.7 0.0 3.2 3 0 0 3 3 3 0 Sporulation protein YhaL tRNA-synt_2b PF00587.25 gi|156937780|ref|YP_001435576.1| - 2.6e-34 118.8 0.0 6.1e-34 117.5 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|156937780|ref|YP_001435576.1| - 1.5e-20 73.4 12.0 2.9e-20 72.5 12.0 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain Syntaxin PF00804.25 gi|156937780|ref|YP_001435576.1| - 0.0057 16.3 2.3 0.01 15.5 2.3 1.4 1 0 0 1 1 1 1 Syntaxin GrpE PF01025.19 gi|156937780|ref|YP_001435576.1| - 0.012 15.3 2.8 0.024 14.3 2.8 1.4 1 0 0 1 1 1 0 GrpE DUF4294 PF14127.6 gi|156937780|ref|YP_001435576.1| - 0.027 14.4 4.1 0.049 13.6 4.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4294) UPF0228 PF05727.11 gi|156937780|ref|YP_001435576.1| - 0.11 12.4 0.4 0.31 10.9 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0228) tRNA-synt_2 PF00152.20 gi|156937780|ref|YP_001435576.1| - 0.15 11.1 0.0 1.1 8.3 0.0 2.2 1 1 0 1 1 1 0 tRNA synthetases class II (D, K and N) TPR_MLP1_2 PF07926.12 gi|156937780|ref|YP_001435576.1| - 0.23 11.5 10.9 0.49 10.4 10.9 1.5 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein PikAIV_N PF18605.1 gi|156937780|ref|YP_001435576.1| - 0.23 11.1 3.4 0.36 10.4 1.1 2.4 2 0 0 2 2 2 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain UPF0449 PF15136.6 gi|156937780|ref|YP_001435576.1| - 0.27 11.7 5.8 0.74 10.3 5.8 1.8 1 1 0 1 1 1 0 Uncharacterised protein family UPF0449 Borrelia_P83 PF05262.11 gi|156937780|ref|YP_001435576.1| - 0.41 9.1 4.5 0.6 8.5 4.5 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein PCRF PF03462.18 gi|156937780|ref|YP_001435576.1| - 0.44 10.4 6.3 0.29 11.0 3.8 1.9 2 0 0 2 2 2 0 PCRF domain tRNA-synt_His PF13393.6 gi|156937780|ref|YP_001435576.1| - 1.3 8.2 3.7 11 5.2 2.0 2.2 2 0 0 2 2 2 0 Histidyl-tRNA synthetase FapA PF03961.13 gi|156937780|ref|YP_001435576.1| - 4.9 5.7 7.0 7.5 5.0 7.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A APG6_N PF17675.1 gi|156937780|ref|YP_001435576.1| - 5.3 7.6 16.2 16 6.0 16.2 1.8 1 1 0 1 1 1 0 Apg6 coiled-coil region tRNA-synt_1e PF01406.19 gi|156937781|ref|YP_001435577.1| - 2.4e-127 424.4 0.3 3.2e-127 424.0 0.3 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|156937781|ref|YP_001435577.1| - 3.7e-22 78.6 1.1 2.5e-10 39.7 0.4 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|156937781|ref|YP_001435577.1| - 1.3e-09 36.9 0.0 9.9e-07 27.4 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) DALR_2 PF09190.11 gi|156937781|ref|YP_001435577.1| - 2e-08 34.6 0.1 4.1e-08 33.6 0.1 1.6 1 0 0 1 1 1 1 DALR domain tRNA-synt_1f PF01921.18 gi|156937781|ref|YP_001435577.1| - 3.3e-06 26.3 0.4 7.6e-05 21.8 0.1 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) SH3BP5 PF05276.14 gi|156937781|ref|YP_001435577.1| - 0.016 15.1 0.1 0.11 12.3 0.0 2.1 2 1 0 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) Tweety PF04906.13 gi|156937781|ref|YP_001435577.1| - 0.22 10.1 0.0 0.42 9.2 0.0 1.4 1 0 0 1 1 1 0 Tweety Memo PF01875.17 gi|156937782|ref|YP_001435578.1| - 4.6e-81 271.9 0.0 5.2e-81 271.7 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein LigB PF02900.18 gi|156937782|ref|YP_001435578.1| - 0.029 13.4 0.1 0.31 10.1 0.1 2.0 1 1 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase Epimerase PF01370.21 gi|156937783|ref|YP_001435579.1| - 3.6e-52 177.2 0.0 4.3e-52 177.0 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|156937783|ref|YP_001435579.1| - 4e-50 171.1 0.0 1.8e-44 152.5 0.0 2.6 2 1 0 2 2 2 2 GDP-mannose 4,6 dehydratase RmlD_sub_bind PF04321.17 gi|156937783|ref|YP_001435579.1| - 5.1e-24 84.9 0.0 6.3e-24 84.6 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|156937783|ref|YP_001435579.1| - 6.7e-19 67.9 0.0 9.2e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NAD_binding_4 PF07993.12 gi|156937783|ref|YP_001435579.1| - 1.9e-18 66.6 0.1 2e-13 50.1 0.0 2.5 2 1 0 2 2 2 2 Male sterility protein Polysacc_synt_2 PF02719.15 gi|156937783|ref|YP_001435579.1| - 2.7e-15 56.3 0.2 7.9e-11 41.6 0.0 2.9 2 1 0 2 2 2 2 Polysaccharide biosynthesis protein KR PF08659.10 gi|156937783|ref|YP_001435579.1| - 0.00066 19.6 0.1 0.56 10.1 0.0 2.3 1 1 1 2 2 2 2 KR domain NAD_binding_10 PF13460.6 gi|156937783|ref|YP_001435579.1| - 0.00095 19.1 0.0 0.0017 18.2 0.0 1.5 1 0 0 1 1 1 1 NAD(P)H-binding adh_short PF00106.25 gi|156937783|ref|YP_001435579.1| - 0.002 17.6 0.1 0.78 9.2 0.0 2.7 2 1 0 2 2 2 2 short chain dehydrogenase Semialdhyde_dh PF01118.24 gi|156937783|ref|YP_001435579.1| - 0.11 12.9 0.8 2.9 8.3 0.0 2.7 2 1 0 2 2 2 0 Semialdehyde dehydrogenase, NAD binding domain AAA PF00004.29 gi|156937784|ref|YP_001435580.1| - 5.1e-40 137.0 0.0 9.3e-40 136.1 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|156937784|ref|YP_001435580.1| - 3e-12 46.1 0.0 9.6e-12 44.5 0.0 1.9 2 0 0 2 2 1 1 AAA+ lid domain AAA_14 PF13173.6 gi|156937784|ref|YP_001435580.1| - 1.1e-08 35.2 0.0 8.3e-08 32.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|156937784|ref|YP_001435580.1| - 6.4e-08 33.0 0.0 4.9e-06 26.9 0.0 2.9 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|156937784|ref|YP_001435580.1| - 2.8e-07 30.6 0.0 1.2e-06 28.6 0.0 2.1 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 gi|156937784|ref|YP_001435580.1| - 3e-07 30.7 0.0 6.1e-07 29.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Vps4_C PF09336.10 gi|156937784|ref|YP_001435580.1| - 3.4e-07 30.2 0.1 5.9e-06 26.2 0.0 2.3 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_16 PF13191.6 gi|156937784|ref|YP_001435580.1| - 1.1e-06 29.1 0.0 0.00092 19.6 0.0 2.7 1 1 1 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|156937784|ref|YP_001435580.1| - 4.8e-06 26.4 0.0 2.9e-05 23.9 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain ATPase_2 PF01637.18 gi|156937784|ref|YP_001435580.1| - 5.3e-05 23.2 0.3 0.16 11.8 0.0 3.2 2 1 1 3 3 3 2 ATPase domain predominantly from Archaea AAA_33 PF13671.6 gi|156937784|ref|YP_001435580.1| - 0.00018 21.7 0.0 0.00071 19.7 0.0 2.1 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|156937784|ref|YP_001435580.1| - 0.00041 19.6 0.0 0.00097 18.4 0.0 1.6 1 1 0 1 1 1 1 TIP49 P-loop domain AAA_7 PF12775.7 gi|156937784|ref|YP_001435580.1| - 0.0012 18.4 0.0 0.0037 16.8 0.0 1.7 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_25 PF13481.6 gi|156937784|ref|YP_001435580.1| - 0.0018 17.9 0.2 0.14 11.8 0.1 2.4 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|156937784|ref|YP_001435580.1| - 0.0025 18.3 0.0 0.012 16.2 0.0 2.3 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|156937784|ref|YP_001435580.1| - 0.0028 17.4 0.0 0.0051 16.6 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein MIT PF04212.18 gi|156937784|ref|YP_001435580.1| - 0.0041 17.1 2.9 0.013 15.5 2.9 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain Mg_chelatase PF01078.21 gi|156937784|ref|YP_001435580.1| - 0.0043 16.4 0.1 0.016 14.6 0.1 1.8 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 gi|156937784|ref|YP_001435580.1| - 0.0044 17.4 0.0 0.013 15.9 0.0 2.0 1 1 0 1 1 1 1 RNA helicase Bac_DnaA PF00308.18 gi|156937784|ref|YP_001435580.1| - 0.0074 16.2 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 Bacterial dnaA protein ATPase PF06745.13 gi|156937784|ref|YP_001435580.1| - 0.0077 15.6 0.1 2.2 7.6 0.0 2.8 2 1 1 3 3 3 1 KaiC TPR_10 PF13374.6 gi|156937784|ref|YP_001435580.1| - 0.014 15.3 0.1 0.038 13.9 0.1 1.8 1 0 0 1 1 1 0 Tetratricopeptide repeat ABC_tran PF00005.27 gi|156937784|ref|YP_001435580.1| - 0.018 15.6 0.0 0.032 14.8 0.0 1.6 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 gi|156937784|ref|YP_001435580.1| - 0.02 14.2 0.0 0.12 11.7 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin AAA_28 PF13521.6 gi|156937784|ref|YP_001435580.1| - 0.033 14.5 0.0 0.18 12.1 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 gi|156937784|ref|YP_001435580.1| - 0.034 13.3 0.0 0.54 9.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) SKI PF01202.22 gi|156937784|ref|YP_001435580.1| - 0.043 14.0 0.0 0.22 11.6 0.0 2.1 2 0 0 2 2 2 0 Shikimate kinase NACHT PF05729.12 gi|156937784|ref|YP_001435580.1| - 0.052 13.5 0.0 0.16 11.9 0.0 1.8 2 1 0 2 2 1 0 NACHT domain ATP-synt_ab PF00006.25 gi|156937784|ref|YP_001435580.1| - 0.056 13.1 0.0 0.091 12.4 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_17 PF13207.6 gi|156937784|ref|YP_001435580.1| - 0.062 13.7 0.0 0.4 11.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain Sigma54_activat PF00158.26 gi|156937784|ref|YP_001435580.1| - 0.073 12.8 0.0 0.29 10.8 0.0 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_24 PF13479.6 gi|156937784|ref|YP_001435580.1| - 0.11 12.2 0.0 0.28 10.9 0.0 1.8 1 1 0 1 1 1 0 AAA domain AAA_3 PF07726.11 gi|156937784|ref|YP_001435580.1| - 0.15 11.9 0.0 0.35 10.7 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Viral_helicase1 PF01443.18 gi|156937784|ref|YP_001435580.1| - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TPR_2 PF07719.17 gi|156937784|ref|YP_001435580.1| - 1.4 9.2 5.4 1.3 9.3 0.4 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat GntR PF00392.21 gi|156937785|ref|YP_001435581.1| - 1.5e-06 27.8 0.5 5.4e-06 26.0 0.1 2.2 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 gi|156937785|ref|YP_001435581.1| - 5.5e-05 23.0 3.3 0.0036 17.2 0.1 2.9 3 0 0 3 3 3 1 HTH domain HTH_DeoR PF08220.12 gi|156937785|ref|YP_001435581.1| - 7.3e-05 22.4 0.0 0.00018 21.2 0.0 1.7 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|156937785|ref|YP_001435581.1| - 0.00017 21.5 1.4 0.00083 19.3 0.0 2.5 2 1 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|156937785|ref|YP_001435581.1| - 0.00018 21.4 0.0 0.00046 20.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|156937785|ref|YP_001435581.1| - 0.00021 20.8 0.2 0.00021 20.8 0.2 1.9 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|156937785|ref|YP_001435581.1| - 0.00039 20.2 2.9 0.00084 19.2 1.0 2.7 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB FaeA PF04703.12 gi|156937785|ref|YP_001435581.1| - 0.00062 20.1 0.1 0.0013 19.0 0.1 1.6 1 0 0 1 1 1 1 FaeA-like protein Rrf2 PF02082.20 gi|156937785|ref|YP_001435581.1| - 0.00098 19.4 0.1 0.0025 18.1 0.1 1.7 1 0 0 1 1 1 1 Transcriptional regulator RPA_C PF08784.11 gi|156937785|ref|YP_001435581.1| - 0.0018 18.9 0.0 0.0043 17.7 0.0 1.6 1 0 0 1 1 1 1 Replication protein A C terminal PaaX PF07848.12 gi|156937785|ref|YP_001435581.1| - 0.0063 16.7 0.1 0.015 15.5 0.1 1.6 1 0 0 1 1 1 1 PaaX-like protein HTH_AsnC-type PF13404.6 gi|156937785|ref|YP_001435581.1| - 0.0075 16.1 0.1 0.019 14.8 0.1 1.7 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain PCI PF01399.27 gi|156937785|ref|YP_001435581.1| - 0.019 15.5 1.8 0.09 13.3 0.1 2.4 2 1 0 2 2 2 0 PCI domain LexA_DNA_bind PF01726.16 gi|156937785|ref|YP_001435581.1| - 0.024 14.4 0.1 0.056 13.2 0.1 1.7 1 0 0 1 1 1 0 LexA DNA binding domain Phage_antitermQ PF06530.12 gi|156937785|ref|YP_001435581.1| - 0.025 14.5 0.1 0.06 13.3 0.1 1.6 1 0 0 1 1 1 0 Phage antitermination protein Q MarR_2 PF12802.7 gi|156937785|ref|YP_001435581.1| - 0.033 14.1 0.0 0.067 13.1 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_9 PF08221.11 gi|156937785|ref|YP_001435581.1| - 0.054 13.6 0.1 0.16 12.1 0.1 1.8 1 1 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain SKA2 PF16740.5 gi|156937785|ref|YP_001435581.1| - 0.057 13.2 2.0 0.13 12.0 2.0 1.7 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 HAUS6_N PF14661.6 gi|156937785|ref|YP_001435581.1| - 0.072 12.7 4.0 0.16 11.6 2.9 1.9 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus MIP-T3 PF10243.9 gi|156937785|ref|YP_001435581.1| - 0.076 13.0 0.3 0.16 11.9 0.3 1.5 1 0 0 1 1 1 0 Microtubule-binding protein MIP-T3 CH-like domain FeoC PF09012.10 gi|156937785|ref|YP_001435581.1| - 0.11 12.6 0.0 0.28 11.3 0.0 1.8 2 0 0 2 2 1 0 FeoC like transcriptional regulator Rbsn PF11464.8 gi|156937785|ref|YP_001435581.1| - 0.12 12.1 3.3 0.27 11.0 2.2 2.2 1 1 1 2 2 2 0 Rabenosyn Rab binding domain HTH_40 PF14493.6 gi|156937785|ref|YP_001435581.1| - 0.2 12.1 3.7 0.32 11.5 0.0 2.7 2 1 0 2 2 2 0 Helix-turn-helix domain CorA PF01544.18 gi|156937785|ref|YP_001435581.1| - 0.43 9.9 4.6 0.73 9.1 4.6 1.5 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DivIC PF04977.15 gi|156937785|ref|YP_001435581.1| - 2.8 7.8 8.7 2 8.2 3.3 2.6 1 1 1 2 2 2 0 Septum formation initiator KIP1 PF07765.12 gi|156937785|ref|YP_001435581.1| - 7.8 6.7 10.7 0.25 11.5 0.5 3.1 4 0 0 4 4 3 0 KIP1-like protein CdvA PF18822.1 gi|156937786|ref|YP_001435582.1| - 2e-34 118.0 15.2 3e-34 117.5 15.2 1.2 1 0 0 1 1 1 1 CdvA-like coiled-coil domain FapA PF03961.13 gi|156937786|ref|YP_001435582.1| - 0.0025 16.5 3.3 0.0029 16.3 3.3 1.2 1 0 0 1 1 1 1 Flagellar Assembly Protein A PRC PF05239.16 gi|156937786|ref|YP_001435582.1| - 0.0062 16.6 0.1 0.01 15.9 0.1 1.4 1 0 0 1 1 1 1 PRC-barrel domain SKA2 PF16740.5 gi|156937786|ref|YP_001435582.1| - 0.012 15.4 7.7 0.012 15.4 7.7 2.0 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 FliD_C PF07195.12 gi|156937786|ref|YP_001435582.1| - 0.013 15.0 1.4 0.015 14.8 0.3 1.7 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 C-terminus Telomere_reg-2 PF10193.9 gi|156937786|ref|YP_001435582.1| - 0.015 15.8 1.7 0.027 14.9 1.7 1.5 1 0 0 1 1 1 0 Telomere length regulation protein DUF1664 PF07889.12 gi|156937786|ref|YP_001435582.1| - 0.015 15.3 7.9 0.3 11.1 8.4 2.4 2 1 1 3 3 2 0 Protein of unknown function (DUF1664) IL15 PF02372.15 gi|156937786|ref|YP_001435582.1| - 0.019 15.0 1.3 0.028 14.4 1.3 1.2 1 0 0 1 1 1 0 Interleukin 15 Rsd_AlgQ PF04353.13 gi|156937786|ref|YP_001435582.1| - 0.032 14.2 0.8 0.032 14.2 0.8 1.9 2 0 0 2 2 2 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Fmp27_WPPW PF10359.9 gi|156937786|ref|YP_001435582.1| - 0.044 12.6 10.5 0.31 9.8 9.3 1.9 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain SKA1 PF07160.12 gi|156937786|ref|YP_001435582.1| - 0.046 13.6 7.9 0.066 13.1 7.9 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 DUF3578 PF12102.8 gi|156937786|ref|YP_001435582.1| - 0.052 13.1 2.7 0.089 12.4 2.7 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3578) Med11 PF10280.9 gi|156937786|ref|YP_001435582.1| - 0.053 14.0 2.6 0.092 13.2 2.6 1.5 1 1 0 1 1 1 0 Mediator complex protein Baculo_PEP_C PF04513.12 gi|156937786|ref|YP_001435582.1| - 0.062 13.3 0.9 0.17 11.9 0.9 1.9 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Spectrin PF00435.21 gi|156937786|ref|YP_001435582.1| - 0.074 13.5 8.1 0.23 12.0 1.5 2.5 2 1 0 2 2 2 0 Spectrin repeat ALIX_LYPXL_bnd PF13949.6 gi|156937786|ref|YP_001435582.1| - 0.081 12.2 12.6 1.5 8.1 5.9 2.2 1 1 1 2 2 2 0 ALIX V-shaped domain binding to HIV Npa1 PF11707.8 gi|156937786|ref|YP_001435582.1| - 0.099 12.0 2.0 0.57 9.5 0.4 2.0 1 1 1 2 2 2 0 Ribosome 60S biogenesis N-terminal BLOC1_2 PF10046.9 gi|156937786|ref|YP_001435582.1| - 0.11 12.8 10.6 0.24 11.7 4.5 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF5082 PF16888.5 gi|156937786|ref|YP_001435582.1| - 0.18 12.1 8.5 0.097 12.9 2.2 3.1 3 1 0 3 3 2 0 Domain of unknown function (DUF5082) Prefoldin_2 PF01920.20 gi|156937786|ref|YP_001435582.1| - 0.29 11.1 15.6 0.34 10.9 3.5 2.7 3 0 0 3 3 2 0 Prefoldin subunit Uds1 PF15456.6 gi|156937786|ref|YP_001435582.1| - 0.33 11.1 13.9 3 8.0 3.0 2.1 1 1 1 2 2 2 0 Up-regulated During Septation KxDL PF10241.9 gi|156937786|ref|YP_001435582.1| - 0.34 11.2 8.1 1.4 9.2 0.2 2.9 3 0 0 3 3 3 0 Uncharacterized conserved protein DUF1319 PF07028.11 gi|156937786|ref|YP_001435582.1| - 0.35 11.1 10.9 6 7.1 8.8 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) DUF883 PF05957.13 gi|156937786|ref|YP_001435582.1| - 0.37 11.4 7.7 0.054 14.1 2.0 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) PRP1_N PF06424.12 gi|156937786|ref|YP_001435582.1| - 0.51 10.7 11.0 0.064 13.7 3.5 2.1 2 0 0 2 2 2 0 PRP1 splicing factor, N-terminal YlqD PF11068.8 gi|156937786|ref|YP_001435582.1| - 0.55 10.6 15.6 0.83 10.0 8.7 2.2 1 1 1 2 2 2 0 YlqD protein DUF4375 PF14300.6 gi|156937786|ref|YP_001435582.1| - 0.62 10.3 4.6 0.15 12.3 0.7 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4375) YtxH PF12732.7 gi|156937786|ref|YP_001435582.1| - 1.1 9.9 4.0 6.7 7.3 4.0 2.3 1 1 0 1 1 1 0 YtxH-like protein ISG65-75 PF11727.8 gi|156937786|ref|YP_001435582.1| - 1.2 8.3 7.9 4 6.6 0.7 2.1 1 1 1 2 2 2 0 Invariant surface glycoprotein GvpG PF05120.12 gi|156937786|ref|YP_001435582.1| - 1.4 9.0 7.5 4.6 7.3 5.3 2.7 1 1 1 2 2 2 0 Gas vesicle protein G DUF919 PF06034.11 gi|156937786|ref|YP_001435582.1| - 1.8 8.4 10.8 0.4 10.5 1.5 2.6 2 0 0 2 2 2 0 Nucleopolyhedrovirus protein of unknown function (DUF919) DUF3560 PF12083.8 gi|156937786|ref|YP_001435582.1| - 2.1 8.5 11.4 5.1 7.3 3.2 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF3560) Spc7 PF08317.11 gi|156937786|ref|YP_001435582.1| - 2.3 7.0 17.3 2.8 6.7 5.5 1.9 1 1 1 2 2 2 0 Spc7 kinetochore protein WXG100 PF06013.12 gi|156937786|ref|YP_001435582.1| - 2.4 8.5 6.6 15 5.9 0.2 3.4 3 1 1 4 4 4 0 Proteins of 100 residues with WXG DUF2802 PF10975.8 gi|156937786|ref|YP_001435582.1| - 2.4 8.3 14.5 16 5.7 8.1 3.5 2 1 1 3 3 2 0 Protein of unknown function (DUF2802) AAA_13 PF13166.6 gi|156937786|ref|YP_001435582.1| - 2.6 6.6 10.9 7.5 5.1 11.1 1.5 1 1 0 1 1 1 0 AAA domain Fib_alpha PF08702.10 gi|156937786|ref|YP_001435582.1| - 3.6 7.8 10.5 5.3 7.2 7.5 2.2 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family EAP30 PF04157.16 gi|156937786|ref|YP_001435582.1| - 4 6.7 7.6 15 4.7 7.1 2.2 1 1 1 2 2 2 0 EAP30/Vps36 family DUF2175 PF09943.9 gi|156937786|ref|YP_001435582.1| - 6.9 7.0 6.9 3.4 8.0 0.3 2.8 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2175) Mt_ATP-synt_D PF05873.12 gi|156937786|ref|YP_001435582.1| - 7.8 6.3 11.4 0.89 9.4 3.7 2.2 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) Phage_Mu_Gam PF07352.12 gi|156937786|ref|YP_001435582.1| - 7.9 6.4 14.4 30 4.5 11.8 2.3 2 1 1 3 3 2 0 Bacteriophage Mu Gam like protein V_ATPase_I PF01496.19 gi|156937786|ref|YP_001435582.1| - 8.4 4.2 9.2 12 3.7 9.2 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CCDC-167 PF15188.6 gi|156937786|ref|YP_001435582.1| - 9.9 6.6 15.1 69 3.9 1.5 2.6 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Diphthamide_syn PF01866.17 gi|156937788|ref|YP_001435584.1| - 9.8e-40 136.9 0.0 1.2e-39 136.5 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein AIRS_C PF02769.22 gi|156937788|ref|YP_001435584.1| - 0.0061 16.7 0.0 0.013 15.7 0.0 1.5 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain Ribosomal_L16 PF00252.18 gi|156937789|ref|YP_001435585.1| - 2.7e-30 105.1 0.1 3.1e-30 104.9 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e TYW3 PF02676.14 gi|156937790|ref|YP_001435586.1| - 7e-24 84.4 0.0 1.3e-23 83.5 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase TYW3 Gp_dh_C PF02800.20 gi|156937791|ref|YP_001435587.1| - 1.3e-26 93.1 0.1 1.8e-26 92.6 0.1 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|156937791|ref|YP_001435587.1| - 7.4e-13 48.7 0.2 1.9e-12 47.4 0.2 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|156937791|ref|YP_001435587.1| - 3e-07 30.7 0.4 2.3e-06 27.9 0.1 2.6 2 2 1 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|156937791|ref|YP_001435587.1| - 0.00045 20.5 0.2 0.0013 19.0 0.1 1.9 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Semialdhyde_dh PF01118.24 gi|156937791|ref|YP_001435587.1| - 0.002 18.6 0.0 0.033 14.6 0.0 2.4 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|156937791|ref|YP_001435587.1| - 0.01 16.5 0.1 0.033 14.9 0.1 1.9 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|156937791|ref|YP_001435587.1| - 0.026 13.9 0.3 0.68 9.3 0.3 2.9 2 1 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FeoB_N PF02421.18 gi|156937792|ref|YP_001435588.1| - 1.8e-49 167.3 0.0 3.6e-49 166.3 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Gate PF07670.14 gi|156937792|ref|YP_001435588.1| - 1.1e-24 86.9 30.3 3.3e-18 66.0 5.7 3.6 4 0 0 4 4 4 2 Nucleoside recognition MMR_HSR1 PF01926.23 gi|156937792|ref|YP_001435588.1| - 2e-18 66.5 0.0 5.1e-18 65.2 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_C PF07664.12 gi|156937792|ref|YP_001435588.1| - 3.4e-11 42.6 2.2 3.4e-11 42.6 2.2 3.3 3 0 0 3 3 3 1 Ferrous iron transport protein B C terminus FeoB_Cyto PF17910.1 gi|156937792|ref|YP_001435588.1| - 1.9e-09 37.9 0.0 4e-09 36.9 0.0 1.5 1 0 0 1 1 1 1 FeoB cytosolic helical domain AIG1 PF04548.16 gi|156937792|ref|YP_001435588.1| - 0.00031 20.1 0.0 0.00053 19.4 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Dynamin_N PF00350.23 gi|156937792|ref|YP_001435588.1| - 0.00087 19.4 0.1 0.0061 16.6 0.1 1.9 1 1 1 2 2 2 1 Dynamin family IIGP PF05049.13 gi|156937792|ref|YP_001435588.1| - 0.0017 17.5 0.0 0.022 13.9 0.0 2.1 2 0 0 2 2 2 1 Interferon-inducible GTPase (IIGP) RsgA_GTPase PF03193.16 gi|156937792|ref|YP_001435588.1| - 0.0077 16.2 0.0 0.18 11.7 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase Ras PF00071.22 gi|156937792|ref|YP_001435588.1| - 0.12 11.9 0.1 0.33 10.5 0.1 1.8 1 1 0 1 1 1 0 Ras family Fimbrial_K88 PF02432.15 gi|156937792|ref|YP_001435588.1| - 0.15 12.1 0.2 0.32 11.0 0.2 1.5 1 0 0 1 1 1 0 Fimbrial, major and minor subunit Roc PF08477.13 gi|156937792|ref|YP_001435588.1| - 0.16 12.2 0.0 0.34 11.2 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase UvsW PF11637.8 gi|156937792|ref|YP_001435588.1| - 0.52 10.5 2.2 8.3 6.6 0.2 2.5 2 0 0 2 2 2 0 ATP-dependant DNA helicase UvsW Zincin_2 PF10103.9 gi|156937793|ref|YP_001435589.1| - 0.1 11.9 0.0 0.1 11.9 0.0 1.0 1 0 0 1 1 1 0 Zincin-like metallopeptidase Peptidase_S8 PF00082.22 gi|156937795|ref|YP_001435591.1| - 4.2e-22 78.8 0.0 9.2e-21 74.4 0.0 2.0 1 1 0 1 1 1 1 Subtilase family MDM10 PF12519.8 gi|156937795|ref|YP_001435591.1| - 0.074 11.9 0.0 0.13 11.1 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 PhageMin_Tail PF10145.9 gi|156937795|ref|YP_001435591.1| - 0.14 12.0 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Phage-related minor tail protein Rad51 PF08423.11 gi|156937796|ref|YP_001435592.1| - 2.4e-90 302.2 0.0 2.9e-90 302.0 0.0 1.0 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|156937796|ref|YP_001435592.1| - 5.9e-14 52.2 0.1 8.5e-14 51.7 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein HHH_5 PF14520.6 gi|156937796|ref|YP_001435592.1| - 9e-12 45.4 0.3 2.7e-11 43.9 0.3 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain ATPase PF06745.13 gi|156937796|ref|YP_001435592.1| - 4.5e-10 39.3 0.1 9e-10 38.3 0.1 1.6 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|156937796|ref|YP_001435592.1| - 7.3e-07 29.0 0.0 1.1e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain HHH_2 PF12826.7 gi|156937796|ref|YP_001435592.1| - 0.00014 21.9 0.0 0.00051 20.1 0.0 2.0 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|156937796|ref|YP_001435592.1| - 0.0002 21.1 0.5 0.058 13.3 0.1 2.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|156937796|ref|YP_001435592.1| - 0.00021 21.1 0.1 0.0011 18.7 0.0 2.3 2 2 1 3 3 3 1 Fingers domain of DNA polymerase lambda 5_3_exonuc PF01367.20 gi|156937796|ref|YP_001435592.1| - 0.00044 20.8 0.2 0.0021 18.6 0.0 2.1 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold Cdd1 PF11731.8 gi|156937796|ref|YP_001435592.1| - 0.00051 20.2 0.0 0.0011 19.1 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus IMS_HHH PF11798.8 gi|156937796|ref|YP_001435592.1| - 0.0055 17.0 0.0 0.022 15.1 0.0 2.1 2 0 0 2 2 1 1 IMS family HHH motif AAA_18 PF13238.6 gi|156937796|ref|YP_001435592.1| - 0.0055 17.2 0.5 0.056 14.0 0.0 2.8 3 1 0 3 3 3 1 AAA domain DUF3173 PF11372.8 gi|156937796|ref|YP_001435592.1| - 0.0065 16.3 0.0 0.032 14.1 0.0 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF3173) SAM_2 PF07647.17 gi|156937796|ref|YP_001435592.1| - 0.012 15.7 0.0 0.029 14.5 0.0 1.6 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) DUF4332 PF14229.6 gi|156937796|ref|YP_001435592.1| - 0.067 13.4 0.0 0.15 12.3 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4332) FtsA PF14450.6 gi|156937796|ref|YP_001435592.1| - 0.076 13.4 0.0 0.099 13.1 0.0 1.4 1 1 0 1 1 1 0 Cell division protein FtsA SAM_1 PF00536.30 gi|156937796|ref|YP_001435592.1| - 0.1 13.1 0.0 0.23 11.9 0.0 1.6 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Enolase_C PF00113.22 gi|156937797|ref|YP_001435593.1| - 4.4e-116 387.3 0.0 6.1e-116 386.8 0.0 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|156937797|ref|YP_001435593.1| - 5.6e-54 181.8 0.1 1.1e-53 181.0 0.1 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 gi|156937797|ref|YP_001435593.1| - 2.7e-10 40.2 0.1 4.4e-10 39.5 0.1 1.3 1 0 0 1 1 1 1 Enolase C-terminal domain-like MFS_1 PF07690.16 gi|156937798|ref|YP_001435594.1| - 9.6e-22 77.4 37.9 9.6e-22 77.4 37.9 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|156937798|ref|YP_001435594.1| - 7.7e-06 25.0 8.9 7.7e-06 25.0 8.9 2.3 2 1 0 2 2 2 1 Sugar (and other) transporter T2SSE PF00437.20 gi|156937799|ref|YP_001435595.1| - 2.9e-48 164.3 0.0 6.2e-48 163.2 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_29 PF13555.6 gi|156937799|ref|YP_001435595.1| - 0.0048 16.6 0.1 0.011 15.5 0.1 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain Dynamin_N PF00350.23 gi|156937799|ref|YP_001435595.1| - 0.016 15.2 0.0 0.03 14.4 0.0 1.4 1 0 0 1 1 1 0 Dynamin family FtsK_SpoIIIE PF01580.18 gi|156937799|ref|YP_001435595.1| - 0.15 11.4 0.3 0.34 10.2 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family ABC_tran PF00005.27 gi|156937799|ref|YP_001435595.1| - 0.15 12.6 0.0 0.57 10.7 0.0 1.9 2 0 0 2 2 2 0 ABC transporter T2SSF PF00482.23 gi|156937800|ref|YP_001435596.1| - 1.3e-05 25.1 0.8 1.3e-05 25.1 0.8 3.4 5 0 0 5 5 5 1 Type II secretion system (T2SS), protein F Popeye PF04831.13 gi|156937800|ref|YP_001435596.1| - 0.046 13.9 0.7 0.11 12.7 0.7 1.6 1 0 0 1 1 1 0 Popeye protein conserved region protein_MS5 PF04776.12 gi|156937800|ref|YP_001435596.1| - 0.12 12.4 0.2 0.23 11.5 0.2 1.4 1 0 0 1 1 1 0 Protein MS5 DUF2207 PF09972.9 gi|156937800|ref|YP_001435596.1| - 2 7.1 7.8 1.9 7.1 2.4 2.1 2 0 0 2 2 2 0 Predicted membrane protein (DUF2207) EMC3_TMCO1 PF01956.16 gi|156937800|ref|YP_001435596.1| - 5 6.8 10.4 0.81 9.4 5.3 1.9 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like T2SSF PF00482.23 gi|156937801|ref|YP_001435597.1| - 9.8e-10 38.5 1.3 9.8e-10 38.5 1.3 2.5 3 0 0 3 3 3 1 Type II secretion system (T2SS), protein F Wzz PF02706.15 gi|156937801|ref|YP_001435597.1| - 0.49 10.7 0.1 0.49 10.7 0.1 2.2 3 0 0 3 3 3 0 Chain length determinant protein MFS_1 PF07690.16 gi|156937802|ref|YP_001435598.1| - 7.9e-06 25.0 45.5 0.014 14.3 2.9 3.8 1 1 0 2 2 2 2 Major Facilitator Superfamily DUF1358 PF07096.11 gi|156937802|ref|YP_001435598.1| - 0.17 11.9 0.2 0.17 11.9 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1358) Ribosomal_S30 PF04758.14 gi|156937803|ref|YP_001435599.1| - 2.8e-11 43.4 1.7 3.1e-11 43.3 1.7 1.1 1 0 0 1 1 1 1 Ribosomal protein S30 Nudix_N PF12535.8 gi|156937804|ref|YP_001435600.1| - 0.1 12.2 0.5 11 5.7 0.0 2.2 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal MazG PF03819.17 gi|156937805|ref|YP_001435601.1| - 2.2e-10 40.5 0.4 2.9e-10 40.2 0.4 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.7 gi|156937805|ref|YP_001435601.1| - 0.068 13.4 0.0 0.099 12.9 0.0 1.3 1 0 0 1 1 1 0 MazG-like family PRA-PH PF01503.17 gi|156937805|ref|YP_001435601.1| - 0.19 12.2 0.8 0.23 11.9 0.8 1.2 1 0 0 1 1 1 0 Phosphoribosyl-ATP pyrophosphohydrolase YesK PF14150.6 gi|156937806|ref|YP_001435602.1| - 0.062 13.5 2.9 0.072 13.3 2.9 1.1 1 0 0 1 1 1 0 YesK-like protein Herpes_LMP1 PF05297.11 gi|156937806|ref|YP_001435602.1| - 0.12 11.5 2.5 0.12 11.6 2.5 1.0 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) tRNA-synt_1 PF00133.22 gi|156937807|ref|YP_001435603.1| - 1.9e-172 574.6 12.8 2.5e-172 574.3 12.8 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|156937807|ref|YP_001435603.1| - 5.4e-28 97.9 1.5 5.4e-28 97.9 1.5 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|156937807|ref|YP_001435603.1| - 1e-22 80.4 4.4 6.8e-09 34.9 0.4 4.1 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|156937807|ref|YP_001435603.1| - 4.8e-07 29.4 0.4 0.00075 18.9 0.0 3.3 3 1 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|156937807|ref|YP_001435603.1| - 1.2e-05 24.4 0.1 0.00013 21.0 0.0 2.7 3 0 0 3 3 3 1 tRNA synthetases class I (K) DUF5387 PF17361.2 gi|156937807|ref|YP_001435603.1| - 0.012 15.3 0.9 0.039 13.6 0.1 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5387) tRNA-synt_1_2 PF13603.6 gi|156937807|ref|YP_001435603.1| - 0.072 12.6 0.0 0.2 11.2 0.0 1.7 1 0 0 1 1 1 0 Leucyl-tRNA synthetase, Domain 2 Jag_N PF14804.6 gi|156937807|ref|YP_001435603.1| - 0.076 13.4 0.3 0.076 13.4 0.3 2.5 2 0 0 2 2 2 0 Jag N-terminus E6 PF00518.17 gi|156937807|ref|YP_001435603.1| - 0.082 13.4 0.0 3.6 8.1 0.0 2.6 2 0 0 2 2 2 0 Early Protein (E6) Mu-like_Com PF10122.9 gi|156937807|ref|YP_001435603.1| - 0.11 12.0 1.0 0.62 9.6 0.1 2.3 2 0 0 2 2 2 0 Mu-like prophage protein Com Auto_anti-p27 PF06677.12 gi|156937807|ref|YP_001435603.1| - 0.11 12.7 2.1 16 5.7 0.1 3.3 3 0 0 3 3 3 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 gi|156937807|ref|YP_001435603.1| - 0.13 12.3 0.7 7.8 6.6 0.1 2.9 3 0 0 3 3 3 0 Double zinc ribbon zf_UBZ PF18439.1 gi|156937807|ref|YP_001435603.1| - 0.22 11.1 2.3 16 5.2 0.0 3.3 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger zf-TFIIB PF13453.6 gi|156937807|ref|YP_001435603.1| - 0.3 10.4 4.6 6.9 6.1 0.1 3.9 4 0 0 4 4 4 0 Transcription factor zinc-finger Zn-ribbon_8 PF09723.10 gi|156937807|ref|YP_001435603.1| - 0.57 10.4 3.4 7.7 6.7 1.3 3.2 2 1 0 2 2 2 0 Zinc ribbon domain zf-ACC PF17848.1 gi|156937807|ref|YP_001435603.1| - 0.57 10.3 4.3 13 5.9 0.2 3.6 3 0 0 3 3 3 0 Acetyl-coA carboxylase zinc finger domain TF_Zn_Ribbon PF08271.12 gi|156937807|ref|YP_001435603.1| - 2.2 7.9 3.8 24 4.5 0.2 3.3 3 0 0 3 3 3 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|156937807|ref|YP_001435603.1| - 7.5 6.1 8.0 14 5.2 0.1 3.8 4 0 0 4 4 4 0 zinc-ribbon domain Methyltransf_11 PF08241.12 gi|156937808|ref|YP_001435604.1| - 0.044 14.4 0.1 0.088 13.5 0.1 1.6 1 1 0 1 1 1 0 Methyltransferase domain PrmA PF06325.13 gi|156937808|ref|YP_001435604.1| - 0.093 12.1 0.1 0.12 11.7 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PHD_Oberon PF07227.11 gi|156937808|ref|YP_001435604.1| - 8.1 6.3 10.6 0.044 13.7 1.8 1.7 2 0 0 2 2 2 0 PHD - plant homeodomain finger protein BPD_transp_1 PF00528.22 gi|156937809|ref|YP_001435605.1| - 3.3e-06 27.0 3.6 4.8e-06 26.4 3.6 1.3 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|156937810|ref|YP_001435606.1| - 0.0023 17.7 6.5 0.031 14.0 0.9 2.8 2 2 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|156937811|ref|YP_001435607.1| - 4e-69 233.4 0.0 5.2e-69 233.0 0.0 1.1 1 0 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle Nitro_FeMo-Co PF02579.17 gi|156937812|ref|YP_001435608.1| - 4.7e-11 42.9 0.0 6.2e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Dinitrogenase iron-molybdenum cofactor VanZ PF04892.12 gi|156937813|ref|YP_001435609.1| - 1.7e-08 35.1 0.4 2.2e-08 34.8 0.4 1.3 1 1 0 1 1 1 1 VanZ like family POTRA_2 PF08479.11 gi|156937815|ref|YP_001435611.1| - 0.14 12.0 0.0 0.18 11.7 0.0 1.3 1 1 0 1 1 1 0 POTRA domain, ShlB-type AsnC_trans_reg PF01037.21 gi|156937817|ref|YP_001435613.1| - 2.2e-15 56.3 0.1 2.5e-15 56.2 0.1 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|156937817|ref|YP_001435613.1| - 0.00021 21.3 0.1 0.00026 21.0 0.1 1.1 1 0 0 1 1 1 1 NapD protein GYD PF08734.11 gi|156937817|ref|YP_001435613.1| - 0.0016 18.4 0.0 0.002 18.1 0.0 1.3 1 0 0 1 1 1 1 GYD domain AsnC_trans_reg2 PF17805.1 gi|156937817|ref|YP_001435613.1| - 0.045 13.9 0.0 0.049 13.8 0.0 1.1 1 0 0 1 1 1 0 AsnC-like ligand binding domain Thioredoxin_4 PF13462.6 gi|156937818|ref|YP_001435614.1| - 9.5e-08 32.4 0.0 1.6e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin TSP_3 PF02412.18 gi|156937819|ref|YP_001435615.1| - 1e-05 25.1 2.3 1e-05 25.1 2.3 17.1 17 3 0 17 17 17 8 Thrombospondin type 3 repeat Laminin_G_3 PF13385.6 gi|156937820|ref|YP_001435616.1| - 9.8e-20 71.2 0.0 2e-19 70.3 0.0 1.5 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Phage_CI_C PF16452.5 gi|156937820|ref|YP_001435616.1| - 0.17 12.2 0.0 0.34 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage CI repressor C-terminal domain Virul_fac_BrkB PF03631.15 gi|156937821|ref|YP_001435617.1| - 0.00045 19.9 2.5 0.00045 19.9 2.5 3.4 3 1 1 4 4 4 1 Virulence factor BrkB DUF1622 PF07784.11 gi|156937821|ref|YP_001435617.1| - 0.072 13.0 1.5 2.2 8.2 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1622) Na_Pi_cotrans PF02690.15 gi|156937821|ref|YP_001435617.1| - 0.41 10.8 6.9 0.69 10.0 3.0 2.2 2 0 0 2 2 2 0 Na+/Pi-cotransporter AFOR_C PF01314.18 gi|156937822|ref|YP_001435618.1| - 7.4e-134 446.5 0.1 8.9e-134 446.3 0.1 1.1 1 0 0 1 1 1 1 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AFOR_N PF02730.15 gi|156937822|ref|YP_001435618.1| - 1.9e-73 246.5 1.7 2.2e-73 246.3 0.3 1.8 2 0 0 2 2 2 1 Aldehyde ferredoxin oxidoreductase, N-terminal domain PALP PF00291.25 gi|156937824|ref|YP_001435620.1| - 1.3e-80 271.0 4.1 1.5e-80 270.7 4.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme HypA PF01155.19 gi|156937824|ref|YP_001435620.1| - 0.0052 16.8 0.2 0.0097 15.9 0.2 1.5 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-ribbon_3 PF13248.6 gi|156937824|ref|YP_001435620.1| - 0.0066 15.8 0.8 0.011 15.1 0.8 1.4 1 0 0 1 1 1 1 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|156937824|ref|YP_001435620.1| - 0.016 15.3 0.6 0.035 14.2 0.6 1.6 1 0 0 1 1 1 0 Zinc ribbon domain PK_C PF02887.16 gi|156937824|ref|YP_001435620.1| - 0.039 14.2 1.7 0.045 14.0 0.1 1.9 2 1 0 2 2 2 0 Pyruvate kinase, alpha/beta domain TetR_C_33 PF13305.6 gi|156937824|ref|YP_001435620.1| - 0.05 14.3 1.1 0.36 11.6 0.3 2.2 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain TF_Zn_Ribbon PF08271.12 gi|156937824|ref|YP_001435620.1| - 0.08 12.5 1.6 0.15 11.6 1.6 1.4 1 0 0 1 1 1 0 TFIIB zinc-binding DZR PF12773.7 gi|156937824|ref|YP_001435620.1| - 0.23 11.5 0.7 0.36 10.9 0.7 1.3 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|156937824|ref|YP_001435620.1| - 0.4 10.5 3.1 0.85 9.4 3.1 1.5 1 0 0 1 1 1 0 zinc-ribbon domain adh_short_C2 PF13561.6 gi|156937826|ref|YP_001435622.1| - 1.8e-48 165.2 0.0 2.5e-48 164.7 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|156937826|ref|YP_001435622.1| - 1.2e-43 148.9 0.0 1.4e-43 148.6 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|156937826|ref|YP_001435622.1| - 9e-07 29.0 0.0 1.5e-06 28.3 0.0 1.3 1 0 0 1 1 1 1 KR domain Lactamase_B_2 PF12706.7 gi|156937827|ref|YP_001435623.1| - 6e-24 84.7 0.1 2.6e-11 43.4 0.1 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156937827|ref|YP_001435623.1| - 1.6e-08 34.8 0.0 6.2e-08 32.9 0.0 1.8 1 1 1 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|156937827|ref|YP_001435623.1| - 0.0028 17.3 0.0 0.005 16.5 0.0 1.4 1 0 0 1 1 1 1 tRNase Z endonuclease NAD_binding_10 PF13460.6 gi|156937827|ref|YP_001435623.1| - 0.004 17.1 0.1 0.0067 16.3 0.1 1.3 1 0 0 1 1 1 1 NAD(P)H-binding RAMPs PF03787.15 gi|156937828|ref|YP_001435624.1| - 0.22 11.5 1.6 0.54 10.3 1.6 1.7 1 0 0 1 1 1 0 RAMP superfamily DUF357 PF04010.13 gi|156937829|ref|YP_001435625.1| - 2.1e-17 63.0 0.4 3.6e-17 62.2 0.4 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF357) CTP_transf_like PF01467.26 gi|156937829|ref|YP_001435625.1| - 1e-15 58.2 0.0 1.9e-15 57.3 0.0 1.4 2 0 0 2 2 2 1 Cytidylyltransferase-like Peripla_BP_2 PF01497.18 gi|156937829|ref|YP_001435625.1| - 5.6e-05 22.8 0.0 0.0004 20.0 0.0 2.0 2 0 0 2 2 2 1 Periplasmic binding protein FAD_syn PF06574.12 gi|156937829|ref|YP_001435625.1| - 0.014 15.3 0.0 0.052 13.4 0.0 1.8 2 0 0 2 2 2 0 FAD synthetase Ish1 PF10281.9 gi|156937829|ref|YP_001435625.1| - 0.028 14.7 0.1 0.077 13.3 0.0 1.9 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein SAP PF02037.27 gi|156937829|ref|YP_001435625.1| - 0.053 13.3 0.7 0.13 12.1 0.7 1.7 1 0 0 1 1 1 0 SAP domain zf-CCCH_6 PF18585.1 gi|156937829|ref|YP_001435625.1| - 0.066 13.1 0.1 0.35 10.8 0.0 2.2 1 1 1 2 2 2 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 2 DUF498 PF04430.14 gi|156937829|ref|YP_001435625.1| - 0.076 13.1 0.0 0.16 12.1 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF498/DUF598) Pantoate_ligase PF02569.15 gi|156937829|ref|YP_001435625.1| - 0.17 11.1 0.0 0.3 10.3 0.0 1.4 1 0 0 1 1 1 0 Pantoate-beta-alanine ligase ACT_4 PF13291.6 gi|156937830|ref|YP_001435626.1| - 1.5e-05 25.5 0.0 2.3e-05 24.9 0.0 1.3 1 0 0 1 1 1 1 ACT domain MazE_antitoxin PF04014.18 gi|156937830|ref|YP_001435626.1| - 3.5e-05 23.6 0.5 0.00015 21.6 0.1 2.3 2 1 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|156937830|ref|YP_001435626.1| - 0.0013 19.2 0.0 0.0018 18.7 0.0 1.3 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin MraZ PF02381.18 gi|156937830|ref|YP_001435626.1| - 0.0028 17.6 0.0 0.0054 16.7 0.0 1.4 1 0 0 1 1 1 1 MraZ protein, putative antitoxin-like ACT PF01842.25 gi|156937830|ref|YP_001435626.1| - 0.0033 17.2 0.1 0.0077 16.0 0.1 1.7 1 1 0 1 1 1 1 ACT domain Radical_SAM PF04055.21 gi|156937830|ref|YP_001435626.1| - 0.031 14.7 0.1 0.033 14.6 0.1 1.1 1 0 0 1 1 1 0 Radical SAM superfamily DNA_pol_A PF00476.20 gi|156937830|ref|YP_001435626.1| - 0.13 11.2 0.0 0.17 10.9 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase family A DUF2286 PF10051.9 gi|156937831|ref|YP_001435627.1| - 7.2e-40 135.9 1.2 8.1e-40 135.8 1.2 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2286) PDDEXK_10 PF07788.11 gi|156937831|ref|YP_001435627.1| - 0.11 12.5 0.0 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 PD-(D/E)XK nuclease superfamily PHP_C PF13263.6 gi|156937832|ref|YP_001435628.1| - 1.4e-13 50.4 0.1 2.5e-13 49.6 0.1 1.4 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|156937832|ref|YP_001435628.1| - 3e-10 40.7 0.0 4.1e-10 40.2 0.0 1.4 1 1 0 1 1 1 1 PHP domain IF3_N PF05198.16 gi|156937832|ref|YP_001435628.1| - 0.049 13.9 0.1 3.4 8.0 0.0 2.6 3 0 0 3 3 3 0 Translation initiation factor IF-3, N-terminal domain SRP54 PF00448.22 gi|156937833|ref|YP_001435629.1| - 2.5e-72 242.7 0.6 3.8e-72 242.1 0.6 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|156937833|ref|YP_001435629.1| - 1.8e-29 102.2 0.9 1.6e-28 99.2 0.1 2.6 3 0 0 3 3 2 1 Signal peptide binding domain SRP54_N PF02881.19 gi|156937833|ref|YP_001435629.1| - 1.7e-13 50.6 0.1 1.7e-13 50.6 0.1 2.8 3 0 0 3 3 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|156937833|ref|YP_001435629.1| - 2.3e-06 27.7 0.0 6.9e-06 26.1 0.0 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_33 PF13671.6 gi|156937833|ref|YP_001435629.1| - 2.6e-06 27.7 0.0 6.2e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 gi|156937833|ref|YP_001435629.1| - 1.4e-05 24.5 0.0 2.7e-05 23.5 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_17 PF13207.6 gi|156937833|ref|YP_001435629.1| - 2.7e-05 24.6 1.5 5.2e-05 23.7 0.2 2.2 2 0 0 2 2 1 1 AAA domain AAA_30 PF13604.6 gi|156937833|ref|YP_001435629.1| - 0.00023 21.0 1.7 0.00056 19.7 1.7 1.7 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|156937833|ref|YP_001435629.1| - 0.00028 20.0 0.0 0.00065 18.8 0.0 1.6 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|156937833|ref|YP_001435629.1| - 0.00056 19.5 1.1 0.012 15.2 1.1 2.3 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|156937833|ref|YP_001435629.1| - 0.00079 19.5 1.1 0.0032 17.5 0.4 2.4 2 1 0 2 2 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|156937833|ref|YP_001435629.1| - 0.0016 18.7 0.0 0.0073 16.6 0.0 2.1 1 0 0 1 1 1 1 AAA domain MobB PF03205.14 gi|156937833|ref|YP_001435629.1| - 0.0019 18.1 0.0 0.0057 16.5 0.0 1.8 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B 6PF2K PF01591.18 gi|156937833|ref|YP_001435629.1| - 0.0026 17.1 0.0 0.0048 16.2 0.0 1.4 1 0 0 1 1 1 1 6-phosphofructo-2-kinase APS_kinase PF01583.20 gi|156937833|ref|YP_001435629.1| - 0.0076 16.2 0.0 0.018 14.9 0.0 1.6 1 0 0 1 1 1 1 Adenylylsulphate kinase AAA_18 PF13238.6 gi|156937833|ref|YP_001435629.1| - 0.022 15.3 0.1 0.089 13.3 0.0 2.2 2 0 0 2 2 1 0 AAA domain AAA_28 PF13521.6 gi|156937833|ref|YP_001435629.1| - 0.024 14.9 0.0 0.049 13.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 gi|156937833|ref|YP_001435629.1| - 0.027 14.3 1.2 0.063 13.0 0.1 2.1 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein AAA_31 PF13614.6 gi|156937833|ref|YP_001435629.1| - 0.028 14.3 0.0 0.069 13.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 gi|156937833|ref|YP_001435629.1| - 0.042 14.3 1.5 0.17 12.3 0.0 2.7 4 0 0 4 4 2 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|156937833|ref|YP_001435629.1| - 0.07 13.1 0.0 0.22 11.5 0.0 1.9 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Thymidylate_kin PF02223.17 gi|156937833|ref|YP_001435629.1| - 0.078 12.7 2.2 0.29 10.8 0.1 3.0 4 1 0 4 4 3 0 Thymidylate kinase AAA_16 PF13191.6 gi|156937833|ref|YP_001435629.1| - 0.13 12.6 0.0 0.34 11.3 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain adh_short_C2 PF13561.6 gi|156937833|ref|YP_001435629.1| - 0.17 11.4 1.2 0.3 10.6 0.4 1.7 2 0 0 2 2 2 0 Enoyl-(Acyl carrier protein) reductase NTPase_1 PF03266.15 gi|156937833|ref|YP_001435629.1| - 1.1 9.1 6.6 1.6 8.7 2.4 2.7 2 1 0 2 2 2 0 NTPase Amidohydro_1 PF01979.20 gi|156937835|ref|YP_001435631.1| - 7e-15 55.2 0.2 1.6e-11 44.1 0.1 2.2 1 1 0 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 gi|156937835|ref|YP_001435631.1| - 1.1e-08 35.0 0.3 2.7e-08 33.7 0.1 1.6 2 0 0 2 2 2 1 Amidohydrolase family PucR PF07905.11 gi|156937835|ref|YP_001435631.1| - 0.0069 16.6 0.3 0.23 11.8 0.1 2.8 2 1 0 2 2 2 1 Purine catabolism regulatory protein-like family NOG1_N PF17835.1 gi|156937836|ref|YP_001435632.1| - 4.1e-21 75.6 1.3 6.5e-21 75.0 0.2 1.8 2 0 0 2 2 2 1 NOG1 N-terminal helical domain MMR_HSR1 PF01926.23 gi|156937836|ref|YP_001435632.1| - 7.4e-18 64.7 0.0 1.2e-17 64.0 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.14 gi|156937836|ref|YP_001435632.1| - 5.1e-16 58.2 0.1 9.4e-16 57.3 0.1 1.5 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 gi|156937836|ref|YP_001435632.1| - 4.7e-14 52.2 0.0 7.9e-14 51.5 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 gi|156937836|ref|YP_001435632.1| - 1.7e-07 31.3 0.8 0.00044 20.2 0.1 2.7 2 1 0 2 2 2 2 RsgA GTPase Ras PF00071.22 gi|156937836|ref|YP_001435632.1| - 5.5e-06 26.1 0.0 1.2e-05 25.0 0.0 1.6 1 1 0 1 1 1 1 Ras family GTP_EFTU PF00009.27 gi|156937836|ref|YP_001435632.1| - 8.1e-05 22.2 0.1 0.00031 20.3 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 gi|156937836|ref|YP_001435632.1| - 0.00039 19.8 0.0 0.00057 19.3 0.0 1.2 1 0 0 1 1 1 1 AIG1 family Arf PF00025.21 gi|156937836|ref|YP_001435632.1| - 0.0014 18.1 0.2 0.025 14.0 0.0 2.6 2 1 0 2 2 2 1 ADP-ribosylation factor family SRPRB PF09439.10 gi|156937836|ref|YP_001435632.1| - 0.0023 17.4 0.0 0.0056 16.1 0.0 1.6 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Dynamin_N PF00350.23 gi|156937836|ref|YP_001435632.1| - 0.0023 18.0 1.1 0.026 14.6 0.2 2.4 1 1 1 2 2 2 1 Dynamin family Gtr1_RagA PF04670.12 gi|156937836|ref|YP_001435632.1| - 0.0034 16.8 0.0 0.0055 16.1 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1_Xtn PF16897.5 gi|156937836|ref|YP_001435632.1| - 0.0072 16.3 0.0 0.021 14.8 0.0 1.7 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain ATP_bind_1 PF03029.17 gi|156937836|ref|YP_001435632.1| - 0.018 14.8 0.3 0.93 9.2 0.1 2.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein PduV-EutP PF10662.9 gi|156937836|ref|YP_001435632.1| - 0.023 14.5 0.0 0.14 11.9 0.0 2.1 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation KTI12 PF08433.10 gi|156937836|ref|YP_001435632.1| - 0.078 12.4 1.2 0.33 10.3 0.0 2.4 3 0 0 3 3 3 0 Chromatin associated protein KTI12 Roc PF08477.13 gi|156937836|ref|YP_001435632.1| - 0.12 12.6 0.2 1.3 9.2 0.1 2.3 2 1 0 2 2 1 0 Ras of Complex, Roc, domain of DAPkinase DUF3086 PF11285.8 gi|156937838|ref|YP_001435634.1| - 0.0049 16.0 0.4 0.0061 15.7 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3086) ATP-synt_D PF01813.17 gi|156937838|ref|YP_001435634.1| - 0.0088 15.9 1.6 0.012 15.5 1.6 1.4 1 1 0 1 1 1 1 ATP synthase subunit D YabA PF06156.13 gi|156937838|ref|YP_001435634.1| - 0.049 14.3 1.9 0.21 12.2 0.4 2.0 2 0 0 2 2 2 0 Initiation control protein YabA MIT PF04212.18 gi|156937838|ref|YP_001435634.1| - 0.055 13.6 4.0 0.055 13.6 4.0 1.8 2 1 0 2 2 2 0 MIT (microtubule interacting and transport) domain GHMP_kinases_C PF08544.13 gi|156937838|ref|YP_001435634.1| - 0.27 11.6 1.1 4.1 7.8 0.2 2.2 2 0 0 2 2 2 0 GHMP kinases C terminal DivIC PF04977.15 gi|156937838|ref|YP_001435634.1| - 0.36 10.6 4.4 0.1 12.4 1.6 1.6 2 0 0 2 2 2 0 Septum formation initiator UPF0184 PF03670.13 gi|156937838|ref|YP_001435634.1| - 2.2 8.7 6.6 0.48 10.9 1.4 2.1 2 1 0 2 2 2 0 Uncharacterised protein family (UPF0184) TYW3 PF02676.14 gi|156937839|ref|YP_001435635.1| - 3.8e-29 101.6 0.0 5.6e-29 101.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase TYW3 Reeler PF02014.16 gi|156937841|ref|YP_001435637.1| - 0.18 12.6 0.1 0.53 11.0 0.1 2.0 1 1 0 1 1 1 0 Reeler domain TP6A_N PF04406.14 gi|156937842|ref|YP_001435638.1| - 2.8e-20 72.1 0.2 4.5e-20 71.4 0.2 1.3 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF2399 PF09664.10 gi|156937842|ref|YP_001435638.1| - 0.00048 20.1 0.0 0.00086 19.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function C-terminus (DUF2399) GTP_EFTU_D4 PF14578.6 gi|156937842|ref|YP_001435638.1| - 0.0035 17.2 0.2 0.0087 15.9 0.2 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Methyltrn_RNA_2 PF04013.12 gi|156937843|ref|YP_001435639.1| - 0.00099 18.9 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Putative SAM-dependent RNA methyltransferase RHH_1 PF01402.21 gi|156937844|ref|YP_001435640.1| - 0.071 13.1 0.1 0.59 10.2 0.0 2.4 2 0 0 2 2 2 0 Ribbon-helix-helix protein, copG family DUF4325 PF14213.6 gi|156937844|ref|YP_001435640.1| - 0.27 11.0 1.6 0.41 10.4 0.2 2.0 3 0 0 3 3 3 0 STAS-like domain of unknown function (DUF4325) Carb_kinase PF01256.17 gi|156937845|ref|YP_001435641.1| - 1.1e-45 156.0 0.0 1.7e-45 155.4 0.0 1.3 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|156937845|ref|YP_001435641.1| - 7e-36 123.7 0.0 1.5e-35 122.6 0.0 1.6 1 0 0 1 1 1 1 YjeF-related protein N-terminus Phos_pyr_kin PF08543.12 gi|156937845|ref|YP_001435641.1| - 2.6e-06 27.0 0.0 4.2e-06 26.3 0.0 1.4 1 1 0 1 1 1 1 Phosphomethylpyrimidine kinase HK PF02110.15 gi|156937845|ref|YP_001435641.1| - 4.4e-06 26.3 0.1 1.7e-05 24.4 0.0 1.8 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family Peptidase_C97 PF05903.14 gi|156937846|ref|YP_001435642.1| - 0.14 12.0 0.0 0.3 10.9 0.0 1.6 1 0 0 1 1 1 0 PPPDE putative peptidase domain 3HCDH_N PF02737.18 gi|156937847|ref|YP_001435643.1| - 3.9e-67 225.6 2.0 6.9e-67 224.8 2.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ECH_1 PF00378.20 gi|156937847|ref|YP_001435643.1| - 2.9e-60 203.7 0.0 5.1e-60 202.9 0.0 1.4 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH PF00725.22 gi|156937847|ref|YP_001435643.1| - 7.7e-53 177.1 0.9 4.9e-30 104.0 0.1 3.0 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|156937847|ref|YP_001435643.1| - 1.1e-32 113.9 0.6 9e-31 107.6 0.1 2.9 2 1 0 2 2 2 1 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|156937847|ref|YP_001435643.1| - 4.3e-06 27.0 0.4 4.7e-05 23.6 0.4 2.5 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AlaDh_PNT_C PF01262.21 gi|156937847|ref|YP_001435643.1| - 3.6e-05 23.2 0.2 7.8e-05 22.1 0.2 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Sacchrp_dh_NADP PF03435.18 gi|156937847|ref|YP_001435643.1| - 5.8e-05 23.4 0.0 0.00093 19.5 0.0 2.4 2 0 0 2 2 2 1 Saccharopine dehydrogenase NADP binding domain Pyr_redox_2 PF07992.14 gi|156937847|ref|YP_001435643.1| - 0.00022 20.6 0.1 0.00061 19.1 0.1 1.7 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|156937847|ref|YP_001435643.1| - 0.0033 17.4 0.3 0.02 14.8 0.1 2.4 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Pyr_redox PF00070.27 gi|156937847|ref|YP_001435643.1| - 0.004 17.7 0.6 0.018 15.6 0.2 2.4 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase DFP PF04127.15 gi|156937847|ref|YP_001435643.1| - 0.012 15.4 0.2 1.1 9.0 0.0 2.5 2 0 0 2 2 2 0 DNA / pantothenate metabolism flavoprotein Phage_CI_C PF16452.5 gi|156937847|ref|YP_001435643.1| - 0.041 14.2 0.0 0.43 10.9 0.0 2.2 2 0 0 2 2 2 0 Bacteriophage CI repressor C-terminal domain ThiF PF00899.21 gi|156937847|ref|YP_001435643.1| - 0.069 12.5 0.5 0.23 10.8 0.3 1.9 2 0 0 2 2 2 0 ThiF family NAD_binding_7 PF13241.6 gi|156937847|ref|YP_001435643.1| - 0.078 13.4 0.1 0.18 12.3 0.1 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding 2-Hacid_dh_C PF02826.19 gi|156937847|ref|YP_001435643.1| - 0.09 12.1 0.1 0.19 11.1 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|156937847|ref|YP_001435643.1| - 0.1 13.2 0.7 0.71 10.5 0.7 2.4 1 1 0 1 1 1 0 NADP oxidoreductase coenzyme F420-dependent FAD_binding_3 PF01494.19 gi|156937847|ref|YP_001435643.1| - 0.19 11.0 0.0 0.31 10.2 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain RrnaAD PF00398.20 gi|156937848|ref|YP_001435644.1| - 1.8e-36 125.6 0.0 2.4e-36 125.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Met_10 PF02475.16 gi|156937848|ref|YP_001435644.1| - 0.00015 21.6 0.0 0.0013 18.6 0.0 1.9 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_4 PF02390.17 gi|156937848|ref|YP_001435644.1| - 0.0018 17.8 0.0 0.0029 17.1 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase PCMT PF01135.19 gi|156937848|ref|YP_001435644.1| - 0.0025 17.6 0.0 0.0033 17.2 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_25 PF13649.6 gi|156937848|ref|YP_001435644.1| - 0.0083 16.8 0.0 0.013 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GidB PF02527.15 gi|156937848|ref|YP_001435644.1| - 0.0092 15.3 0.1 0.014 14.7 0.1 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_11 PF08241.12 gi|156937848|ref|YP_001435644.1| - 0.11 13.2 0.0 0.18 12.4 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DUF655 PF04919.12 gi|156937849|ref|YP_001435645.1| - 1.2e-56 191.5 0.3 1.5e-56 191.2 0.3 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|156937849|ref|YP_001435645.1| - 3.5e-06 27.2 0.0 5.7e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|156937849|ref|YP_001435645.1| - 8.4e-06 26.0 0.0 2.2e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH PF00633.23 gi|156937849|ref|YP_001435645.1| - 0.0023 17.7 0.2 0.022 14.6 0.0 2.5 3 0 0 3 3 3 1 Helix-hairpin-helix motif Sec61_beta PF03911.16 gi|156937850|ref|YP_001435646.1| - 2e-11 43.7 0.3 2.3e-11 43.6 0.3 1.1 1 0 0 1 1 1 1 Sec61beta family ERCC4 PF02732.15 gi|156937851|ref|YP_001435647.1| - 4e-24 85.6 0.0 5.4e-24 85.2 0.0 1.2 1 0 0 1 1 1 1 ERCC4 domain HHH_5 PF14520.6 gi|156937851|ref|YP_001435647.1| - 5.9e-11 42.8 0.0 1.3e-10 41.8 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 gi|156937851|ref|YP_001435647.1| - 6e-11 42.3 0.0 2.7e-10 40.2 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH PF00633.23 gi|156937851|ref|YP_001435647.1| - 3e-08 33.1 0.2 0.0044 16.8 0.0 2.6 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH_3 PF12836.7 gi|156937851|ref|YP_001435647.1| - 4.9e-06 26.7 0.0 0.0029 17.8 0.0 2.5 2 0 0 2 2 2 2 Helix-hairpin-helix motif 5_3_exonuc PF01367.20 gi|156937851|ref|YP_001435647.1| - 0.0013 19.3 0.0 0.0056 17.3 0.0 2.0 2 1 1 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold TrmB PF01978.19 gi|156937851|ref|YP_001435647.1| - 0.011 15.6 0.1 0.16 11.9 0.0 2.4 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB IMS_HHH PF11798.8 gi|156937851|ref|YP_001435647.1| - 0.02 15.2 0.1 0.16 12.3 0.0 2.6 2 0 0 2 2 2 0 IMS family HHH motif ChaC PF04752.12 gi|156937851|ref|YP_001435647.1| - 0.037 14.1 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 ChaC-like protein YcgL PF05166.13 gi|156937851|ref|YP_001435647.1| - 0.1 13.0 0.1 28 5.2 0.0 2.6 3 0 0 3 3 3 0 YcgL domain YqaH PF17448.2 gi|156937852|ref|YP_001435648.1| - 0.042 14.2 0.3 0.061 13.6 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized YqaH-like DUF5448 PF17526.2 gi|156937852|ref|YP_001435648.1| - 0.087 13.0 0.2 3.6 7.8 0.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5448) UVR PF02151.19 gi|156937852|ref|YP_001435648.1| - 0.26 11.1 3.6 5.4 6.9 0.2 2.4 2 0 0 2 2 2 0 UvrB/uvrC motif Iso_dh PF00180.20 gi|156937853|ref|YP_001435649.1| - 8.5e-107 357.3 0.0 9.9e-107 357.1 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase NTPase_1 PF03266.15 gi|156937855|ref|YP_001435651.1| - 1.1e-48 165.4 0.0 1.2e-48 165.2 0.0 1.0 1 0 0 1 1 1 1 NTPase AAA PF00004.29 gi|156937855|ref|YP_001435651.1| - 9.7e-06 26.0 0.0 1.8e-05 25.2 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|156937855|ref|YP_001435651.1| - 1.2e-05 25.6 0.1 2.3e-05 24.7 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156937855|ref|YP_001435651.1| - 3.6e-05 23.6 0.1 0.00011 22.0 0.1 1.8 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|156937855|ref|YP_001435651.1| - 7.1e-05 21.9 0.3 0.00012 21.2 0.2 1.4 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|156937855|ref|YP_001435651.1| - 0.00011 22.6 0.2 0.00031 21.2 0.0 1.7 2 1 0 2 2 1 1 AAA ATPase domain AAA_18 PF13238.6 gi|156937855|ref|YP_001435651.1| - 0.00038 21.0 0.1 0.00073 20.1 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|156937855|ref|YP_001435651.1| - 0.0007 20.0 0.6 0.0026 18.2 0.4 1.8 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|156937855|ref|YP_001435651.1| - 0.00073 19.5 0.1 0.0014 18.5 0.1 1.4 1 0 0 1 1 1 1 NACHT domain APS_kinase PF01583.20 gi|156937855|ref|YP_001435651.1| - 0.00077 19.4 0.0 0.0022 17.9 0.0 1.7 2 0 0 2 2 2 1 Adenylylsulphate kinase AAA_33 PF13671.6 gi|156937855|ref|YP_001435651.1| - 0.00087 19.5 0.3 0.0017 18.5 0.1 1.5 2 0 0 2 2 1 1 AAA domain AAA_24 PF13479.6 gi|156937855|ref|YP_001435651.1| - 0.0021 17.8 0.0 0.0049 16.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|156937855|ref|YP_001435651.1| - 0.0026 17.5 0.0 0.01 15.6 0.0 1.8 2 0 0 2 2 2 1 IstB-like ATP binding protein MobB PF03205.14 gi|156937855|ref|YP_001435651.1| - 0.0032 17.3 0.1 0.0077 16.1 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.27 gi|156937855|ref|YP_001435651.1| - 0.0032 18.0 0.2 0.011 16.2 0.0 1.8 2 0 0 2 2 2 1 ABC transporter MMR_HSR1 PF01926.23 gi|156937855|ref|YP_001435651.1| - 0.0052 16.9 0.0 0.012 15.7 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase RuvB_N PF05496.12 gi|156937855|ref|YP_001435651.1| - 0.0067 16.2 0.0 0.024 14.4 0.0 1.8 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain NB-ARC PF00931.22 gi|156937855|ref|YP_001435651.1| - 0.0084 15.3 0.1 0.016 14.4 0.0 1.5 2 0 0 2 2 2 1 NB-ARC domain Thymidylate_kin PF02223.17 gi|156937855|ref|YP_001435651.1| - 0.0093 15.7 0.0 0.016 14.9 0.0 1.4 1 0 0 1 1 1 1 Thymidylate kinase cobW PF02492.19 gi|156937855|ref|YP_001435651.1| - 0.013 15.1 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_28 PF13521.6 gi|156937855|ref|YP_001435651.1| - 0.013 15.7 0.3 0.023 15.0 0.0 1.6 2 0 0 2 2 1 0 AAA domain DUF2478 PF10649.9 gi|156937855|ref|YP_001435651.1| - 0.014 15.0 0.0 0.03 13.9 0.0 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF2478) Zeta_toxin PF06414.12 gi|156937855|ref|YP_001435651.1| - 0.014 14.7 0.0 0.025 13.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin Cytidylate_kin PF02224.18 gi|156937855|ref|YP_001435651.1| - 0.015 15.1 0.1 0.021 14.6 0.1 1.2 1 0 0 1 1 1 0 Cytidylate kinase KTI12 PF08433.10 gi|156937855|ref|YP_001435651.1| - 0.015 14.7 0.0 0.028 13.9 0.0 1.4 2 0 0 2 2 1 0 Chromatin associated protein KTI12 RNA_helicase PF00910.22 gi|156937855|ref|YP_001435651.1| - 0.019 15.4 0.0 0.046 14.1 0.0 1.6 2 0 0 2 2 1 0 RNA helicase AAA_25 PF13481.6 gi|156937855|ref|YP_001435651.1| - 0.021 14.4 0.1 0.025 14.2 0.1 1.4 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|156937855|ref|YP_001435651.1| - 0.025 14.3 0.3 0.089 12.5 0.1 1.9 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase Rad17 PF03215.15 gi|156937855|ref|YP_001435651.1| - 0.025 14.5 0.1 1.2 9.0 0.2 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain ATPase_2 PF01637.18 gi|156937855|ref|YP_001435651.1| - 0.029 14.3 0.0 0.051 13.5 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF2075 PF09848.9 gi|156937855|ref|YP_001435651.1| - 0.033 13.5 0.0 0.12 11.6 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) PRK PF00485.18 gi|156937855|ref|YP_001435651.1| - 0.044 13.5 0.0 0.061 13.0 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_19 PF13245.6 gi|156937855|ref|YP_001435651.1| - 0.068 13.5 0.2 0.14 12.5 0.1 1.5 2 0 0 2 2 1 0 AAA domain AAA_29 PF13555.6 gi|156937855|ref|YP_001435651.1| - 0.071 12.9 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 gi|156937855|ref|YP_001435651.1| - 0.095 12.7 0.3 0.32 11.0 0.1 1.8 2 1 1 3 3 2 0 AAA domain (dynein-related subfamily) Nitro_FeMo-Co PF02579.17 gi|156937855|ref|YP_001435651.1| - 0.11 12.8 0.0 0.82 10.0 0.0 2.2 1 1 1 2 2 2 0 Dinitrogenase iron-molybdenum cofactor AAA_14 PF13173.6 gi|156937855|ref|YP_001435651.1| - 0.12 12.4 0.0 0.37 10.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 gi|156937855|ref|YP_001435651.1| - 0.13 12.0 0.1 0.22 11.3 0.1 1.3 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein SRP54 PF00448.22 gi|156937855|ref|YP_001435651.1| - 0.14 11.7 0.0 0.45 10.1 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Mg_chelatase PF01078.21 gi|156937855|ref|YP_001435651.1| - 0.16 11.4 0.0 0.24 10.7 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF815 PF05673.13 gi|156937855|ref|YP_001435651.1| - 0.17 11.0 0.0 0.28 10.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) ADK PF00406.22 gi|156937855|ref|YP_001435651.1| - 0.19 11.8 0.1 0.3 11.2 0.1 1.3 1 0 0 1 1 1 0 Adenylate kinase Sigma54_activat PF00158.26 gi|156937855|ref|YP_001435651.1| - 0.22 11.2 0.0 1.1 9.0 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain PhoH PF02562.16 gi|156937855|ref|YP_001435651.1| - 0.25 10.8 0.0 0.4 10.1 0.0 1.2 1 0 0 1 1 1 0 PhoH-like protein DUF87 PF01935.17 gi|156937855|ref|YP_001435651.1| - 0.25 11.4 0.0 0.4 10.7 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain DUF433 PF04255.14 gi|156937856|ref|YP_001435652.1| - 1.2e-27 95.5 0.0 1.5e-27 95.2 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF433) DUF5615 PF18480.1 gi|156937857|ref|YP_001435653.1| - 2.5e-21 75.2 0.0 3.5e-21 74.7 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) Mut7-C PF01927.16 gi|156937857|ref|YP_001435653.1| - 0.00016 21.8 0.0 0.00016 21.8 0.0 1.1 1 0 0 1 1 1 1 Mut7-C RNAse domain PIN_10 PF18478.1 gi|156937857|ref|YP_001435653.1| - 0.00067 19.8 0.0 0.00095 19.3 0.0 1.2 1 0 0 1 1 1 1 PIN like domain CRISPR_Cas6 PF10040.9 gi|156937858|ref|YP_001435654.1| - 2.4e-09 37.7 0.0 4.1e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 Cas6_N PF17952.1 gi|156937858|ref|YP_001435654.1| - 0.0064 16.8 0.0 0.011 16.0 0.0 1.3 1 0 0 1 1 1 1 Cas6 N-terminal domain CstA PF02554.14 gi|156937860|ref|YP_001435656.1| - 0.038 12.9 0.0 0.044 12.7 0.0 1.0 1 0 0 1 1 1 0 Carbon starvation protein CstA Cas_Cas1 PF01867.16 gi|156937861|ref|YP_001435657.1| - 1.4e-38 132.7 0.0 1.7e-38 132.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 BLOC1_2 PF10046.9 gi|156937862|ref|YP_001435658.1| - 0.013 15.7 1.0 0.023 15.0 1.0 1.3 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SKA2 PF16740.5 gi|156937862|ref|YP_001435658.1| - 0.073 12.9 0.9 0.11 12.3 0.9 1.2 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 2 NPV_P10 PF05531.12 gi|156937862|ref|YP_001435658.1| - 0.14 12.7 0.2 0.26 11.8 0.2 1.4 1 0 0 1 1 1 0 Nucleopolyhedrovirus P10 protein Fer4_21 PF14697.6 gi|156937863|ref|YP_001435659.1| - 5.1e-12 45.7 7.1 6.6e-07 29.4 0.9 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156937863|ref|YP_001435659.1| - 1.9e-10 40.1 15.4 2.7e-05 23.8 2.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156937863|ref|YP_001435659.1| - 3.3e-09 37.2 18.6 7.4e-08 32.9 8.6 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156937863|ref|YP_001435659.1| - 2.5e-08 33.5 13.5 5.4e-05 23.0 1.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156937863|ref|YP_001435659.1| - 4.9e-07 29.8 11.4 5.9e-06 26.3 11.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156937863|ref|YP_001435659.1| - 1.1e-06 28.4 11.6 7.7e-05 22.6 1.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|156937863|ref|YP_001435659.1| - 1.3e-06 28.9 6.6 2.8e-06 27.8 6.6 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156937863|ref|YP_001435659.1| - 9.4e-06 25.7 31.3 0.00017 21.7 10.7 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937863|ref|YP_001435659.1| - 2.9e-05 24.9 8.9 0.0001 23.2 9.2 1.7 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|156937863|ref|YP_001435659.1| - 0.00014 22.1 8.0 0.023 15.2 0.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|156937863|ref|YP_001435659.1| - 0.0002 22.2 2.8 0.15 12.9 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156937863|ref|YP_001435659.1| - 0.0002 22.1 14.0 0.0014 19.4 2.7 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|156937863|ref|YP_001435659.1| - 0.0002 21.7 9.0 0.00059 20.2 9.0 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|156937863|ref|YP_001435659.1| - 0.00032 21.2 9.3 0.04 14.5 2.5 2.2 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|156937863|ref|YP_001435659.1| - 0.0015 19.3 8.8 0.38 11.5 0.3 2.4 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_18 PF13746.6 gi|156937863|ref|YP_001435659.1| - 1.4 9.1 11.8 0.55 10.5 2.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain POR PF01558.18 gi|156937864|ref|YP_001435660.1| - 3.4e-41 141.2 0.2 4e-41 141.0 0.2 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase TPP_enzyme_C PF02775.21 gi|156937865|ref|YP_001435661.1| - 3.2e-28 98.4 0.0 4.9e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACP_syn_III_C PF08541.10 gi|156937865|ref|YP_001435661.1| - 0.18 12.0 0.1 0.54 10.5 0.0 1.9 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal POR_N PF01855.19 gi|156937866|ref|YP_001435662.1| - 9.1e-66 221.9 1.6 1.1e-65 221.6 1.6 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|156937866|ref|YP_001435662.1| - 1.1e-19 70.6 0.0 2.2e-19 69.7 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|156937866|ref|YP_001435662.1| - 2.5e-08 33.8 0.0 5.3e-07 29.6 0.0 2.6 2 1 1 3 3 3 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|156937866|ref|YP_001435662.1| - 1.1e-06 28.3 0.5 1.8e-06 27.6 0.5 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DeoC PF01791.9 gi|156937867|ref|YP_001435663.1| - 2.5e-09 37.1 0.4 3.6e-09 36.6 0.4 1.3 1 1 0 1 1 1 1 DeoC/LacD family aldolase DUF4253 PF14062.6 gi|156937867|ref|YP_001435663.1| - 0.057 13.6 0.0 0.13 12.4 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4253) HMGL-like PF00682.19 gi|156937867|ref|YP_001435663.1| - 0.11 12.1 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 HMGL-like DHO_dh PF01180.21 gi|156937867|ref|YP_001435663.1| - 0.16 11.2 0.2 0.3 10.3 0.1 1.5 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase vATP-synt_E PF01991.18 gi|156937868|ref|YP_001435664.1| - 7e-16 58.2 19.3 8.8e-16 57.9 19.3 1.0 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit ATP-synt_B PF00430.18 gi|156937868|ref|YP_001435664.1| - 0.014 15.5 8.8 0.014 15.5 8.8 2.2 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) RNA_GG_bind PF10258.9 gi|156937868|ref|YP_001435664.1| - 0.028 14.5 5.5 1.4 9.0 0.9 2.9 2 0 0 2 2 2 0 PHAX RNA-binding domain Arc_C PF18162.1 gi|156937868|ref|YP_001435664.1| - 0.042 13.7 1.0 0.4 10.6 0.2 2.6 3 0 0 3 3 3 0 Arc C-lobe GRDP-like PF07173.12 gi|156937868|ref|YP_001435664.1| - 0.069 13.8 2.7 0.1 13.3 2.7 1.2 1 0 0 1 1 1 0 Glycine-rich domain-containing protein-like Amidase PF01425.21 gi|156937868|ref|YP_001435664.1| - 0.084 11.8 3.9 0.097 11.6 3.1 1.4 1 1 0 1 1 1 0 Amidase Propep_M14 PF02244.16 gi|156937868|ref|YP_001435664.1| - 0.086 13.2 0.6 1 9.8 0.0 2.5 2 0 0 2 2 2 0 Carboxypeptidase activation peptide DUF1800 PF08811.11 gi|156937868|ref|YP_001435664.1| - 0.11 11.5 1.2 0.14 11.1 1.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1800) DUF4890 PF16231.5 gi|156937868|ref|YP_001435664.1| - 0.31 11.5 8.1 0.7 10.4 8.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4890) DUF2621 PF11084.8 gi|156937868|ref|YP_001435664.1| - 0.36 10.8 2.9 0.69 9.9 2.9 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2621) DUF29 PF01724.16 gi|156937868|ref|YP_001435664.1| - 0.38 11.0 7.5 1.3 9.2 7.5 1.9 1 1 0 1 1 1 0 Domain of unknown function DUF29 B12-binding_2 PF02607.17 gi|156937868|ref|YP_001435664.1| - 0.83 10.1 6.0 1.3 9.5 0.3 2.8 2 1 0 2 2 2 0 B12 binding domain DUF2433 PF10360.9 gi|156937868|ref|YP_001435664.1| - 1.2 9.2 3.7 3.1 7.9 3.7 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2433) BshC PF10079.9 gi|156937868|ref|YP_001435664.1| - 1.3 7.6 10.3 1.8 7.2 10.3 1.1 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC Peptidase_M3_N PF08439.10 gi|156937868|ref|YP_001435664.1| - 1.7 9.0 13.3 11 6.4 0.5 3.5 3 1 0 3 3 3 0 Oligopeptidase F Vps39_2 PF10367.9 gi|156937868|ref|YP_001435664.1| - 1.9 8.9 4.5 1.8 9.1 0.1 2.4 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 RRF PF01765.19 gi|156937868|ref|YP_001435664.1| - 2.8 7.9 18.9 0.61 10.0 2.4 2.6 2 1 0 2 2 2 0 Ribosome recycling factor Mrpl_C PF18502.1 gi|156937868|ref|YP_001435664.1| - 3.7 7.9 10.4 12 6.2 7.9 2.6 2 1 1 3 3 3 0 54S ribosomal protein L8 C-terminal domain Peptidase_M41 PF01434.18 gi|156937868|ref|YP_001435664.1| - 7.3 6.4 14.1 2.3 8.0 2.6 2.9 1 1 2 3 3 3 0 Peptidase family M41 ATP-synt_F PF01990.17 gi|156937869|ref|YP_001435665.1| - 6.4e-16 58.5 0.1 7.2e-16 58.3 0.1 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit CobU PF02283.16 gi|156937869|ref|YP_001435665.1| - 0.042 13.4 0.1 0.052 13.1 0.1 1.1 1 0 0 1 1 1 0 Cobinamide kinase / cobinamide phosphate guanyltransferase TPP_enzyme_M PF00205.22 gi|156937869|ref|YP_001435665.1| - 0.07 12.9 0.0 0.089 12.5 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain SNARE_assoc PF09335.11 gi|156937871|ref|YP_001435667.1| - 1.8e-08 34.9 6.7 1.8e-08 34.9 6.7 2.5 2 1 1 3 3 3 1 SNARE associated Golgi protein UPF0016 PF01169.19 gi|156937871|ref|YP_001435667.1| - 1.2 9.5 12.6 0.33 11.3 0.6 3.5 2 2 2 4 4 4 0 Uncharacterized protein family UPF0016 ABC2_membrane_3 PF12698.7 gi|156937872|ref|YP_001435668.1| - 3e-22 79.2 13.9 3.4e-22 79.0 13.9 1.0 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|156937872|ref|YP_001435668.1| - 1.4e-20 73.8 28.9 3.3e-20 72.6 28.9 1.6 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane PF01061.24 gi|156937872|ref|YP_001435668.1| - 4.4e-07 29.5 17.2 2e-05 24.1 11.7 2.9 2 1 0 2 2 2 2 ABC-2 type transporter ABC2_membrane_4 PF12730.7 gi|156937872|ref|YP_001435668.1| - 1.7e-05 24.9 5.4 1.7e-05 24.9 5.4 3.4 2 1 0 3 3 3 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|156937872|ref|YP_001435668.1| - 0.16 11.5 12.5 0.028 14.0 5.4 2.9 2 1 1 3 3 3 0 ABC-2 family transporter protein DUF2830 PF11125.8 gi|156937872|ref|YP_001435668.1| - 0.35 10.9 4.2 3.5 7.7 0.6 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2830) ABC_tran PF00005.27 gi|156937873|ref|YP_001435669.1| - 6.4e-32 110.9 0.0 8.5e-32 110.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156937873|ref|YP_001435669.1| - 1.2e-10 41.7 0.5 0.00016 21.6 0.0 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|156937873|ref|YP_001435669.1| - 2.4e-05 24.9 0.4 4.2e-05 24.2 0.4 1.5 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156937873|ref|YP_001435669.1| - 0.0033 17.2 0.1 0.0088 15.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|156937873|ref|YP_001435669.1| - 0.021 14.6 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SMC_N PF02463.19 gi|156937873|ref|YP_001435669.1| - 0.03 13.8 0.0 6.9 6.0 0.0 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|156937873|ref|YP_001435669.1| - 0.12 12.1 0.0 0.17 11.6 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain SRP54 PF00448.22 gi|156937873|ref|YP_001435669.1| - 0.14 11.8 0.1 0.44 10.2 0.1 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Radical_SAM PF04055.21 gi|156937874|ref|YP_001435670.1| - 1.5e-16 61.3 0.1 2.3e-16 60.7 0.1 1.3 1 0 0 1 1 1 1 Radical SAM superfamily AP_endonuc_2 PF01261.24 gi|156937874|ref|YP_001435670.1| - 0.0059 16.1 0.1 0.015 14.7 0.0 1.7 1 1 1 2 2 2 1 Xylose isomerase-like TIM barrel TrmB PF01978.19 gi|156937874|ref|YP_001435670.1| - 0.023 14.6 0.0 0.11 12.4 0.0 2.0 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Aconitase PF00330.20 gi|156937875|ref|YP_001435671.1| - 1.3e-97 327.7 2.6 1.6e-95 320.9 2.6 2.3 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|156937875|ref|YP_001435671.1| - 3.9e-06 25.8 0.0 6.1e-06 25.2 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF521) Caudo_bapla_RBP PF08931.10 gi|156937877|ref|YP_001435673.1| - 0.015 14.7 0.0 0.024 14.1 0.0 1.3 1 1 0 1 1 1 0 Receptor-binding protein of phage tail base-plate Siphoviridae, head Topo-VIb_trans PF09239.11 gi|156937878|ref|YP_001435674.1| - 1.1e-64 217.1 0.1 2e-64 216.2 0.1 1.5 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c_3 PF13589.6 gi|156937878|ref|YP_001435674.1| - 5.4e-11 42.5 0.1 1.2e-10 41.4 0.1 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 gi|156937878|ref|YP_001435674.1| - 5e-10 39.9 0.0 1.1e-09 38.8 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.11 gi|156937878|ref|YP_001435674.1| - 2.6e-06 26.5 0.1 5.1e-06 25.5 0.1 1.4 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_S13 PF00416.22 gi|156937878|ref|YP_001435674.1| - 0.00035 21.0 0.5 0.0018 18.6 0.0 2.4 2 0 0 2 2 2 1 Ribosomal protein S13/S18 cwf21 PF08312.12 gi|156937878|ref|YP_001435674.1| - 0.021 15.0 0.1 5.4 7.2 0.0 2.9 2 1 0 2 2 2 0 cwf21 domain IMS_C PF11799.8 gi|156937878|ref|YP_001435674.1| - 0.025 15.3 0.1 0.48 11.1 0.1 2.3 2 0 0 2 2 2 0 impB/mucB/samB family C-terminal domain SHMT PF00464.19 gi|156937879|ref|YP_001435675.1| - 1.1e-67 228.3 0.3 1.3e-67 228.1 0.3 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Beta_elim_lyase PF01212.21 gi|156937879|ref|YP_001435675.1| - 7e-10 38.7 0.0 1.1e-09 38.0 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|156937879|ref|YP_001435675.1| - 8.1e-07 28.3 0.1 1.3e-06 27.6 0.1 1.4 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|156937879|ref|YP_001435675.1| - 1.4e-06 27.9 0.1 8e-06 25.4 0.0 2.0 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_1_2 PF00155.21 gi|156937879|ref|YP_001435675.1| - 8.5e-06 25.2 0.0 1.8e-05 24.1 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II SelA PF03841.13 gi|156937879|ref|YP_001435675.1| - 0.0056 15.7 0.0 0.013 14.6 0.0 1.5 1 1 0 1 1 1 1 L-seryl-tRNA selenium transferase Cys_Met_Meta_PP PF01053.20 gi|156937879|ref|YP_001435675.1| - 0.008 14.8 0.0 0.012 14.1 0.0 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Cytochrom_B562 PF07361.11 gi|156937879|ref|YP_001435675.1| - 0.085 13.5 0.7 0.23 12.1 0.1 2.0 2 0 0 2 2 2 0 Cytochrome b562 AP_endonuc_2 PF01261.24 gi|156937880|ref|YP_001435676.1| - 2.2e-23 82.8 0.1 3.3e-23 82.2 0.1 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|156937880|ref|YP_001435676.1| - 0.00024 20.4 0.1 0.00061 19.1 0.0 1.8 1 1 0 1 1 1 1 UV-endonuclease UvdE Ribosomal_L35Ae PF01247.18 gi|156937881|ref|YP_001435677.1| - 9.5e-13 48.1 0.2 1e-11 44.8 0.2 1.9 1 1 0 1 1 1 1 Ribosomal protein L35Ae Cren7 PF11520.8 gi|156937881|ref|YP_001435677.1| - 0.011 15.7 0.3 0.018 15.0 0.3 1.4 1 0 0 1 1 1 0 Chromatin protein Cren7 CBS PF00571.28 gi|156937882|ref|YP_001435678.1| - 4.2e-31 107.2 9.0 3.6e-15 56.2 0.5 2.1 2 0 0 2 2 2 2 CBS domain Transketolase_C PF02780.20 gi|156937882|ref|YP_001435678.1| - 0.019 14.9 0.2 0.037 13.9 0.1 1.5 1 1 0 1 1 1 0 Transketolase, C-terminal domain Acetyltransf_10 PF13673.7 gi|156937882|ref|YP_001435678.1| - 0.062 13.2 0.0 3.2 7.7 0.0 2.1 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Mem_trans PF03547.18 gi|156937883|ref|YP_001435679.1| - 2.7e-06 26.1 3.8 0.0025 16.3 1.1 2.2 1 1 1 2 2 2 2 Membrane transport protein Zn_Tnp_IS1595 PF12760.7 gi|156937884|ref|YP_001435680.1| - 0.078 13.0 0.6 0.15 12.1 0.6 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain TPP_enzyme_M PF00205.22 gi|156937885|ref|YP_001435681.1| - 9.7e-49 164.6 0.1 1.9e-48 163.7 0.1 1.5 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 gi|156937885|ref|YP_001435681.1| - 1.2e-48 165.0 0.2 2.9e-48 163.7 0.2 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|156937885|ref|YP_001435681.1| - 3.3e-44 150.3 0.1 2e-43 147.8 0.0 2.2 2 1 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACT_5 PF13710.6 gi|156937886|ref|YP_001435682.1| - 6.4e-07 29.1 0.1 9.9e-07 28.5 0.1 1.3 1 0 0 1 1 1 1 ACT domain CLZ PF16526.5 gi|156937886|ref|YP_001435682.1| - 0.12 12.7 0.0 0.17 12.2 0.0 1.2 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels HIT PF01230.23 gi|156937887|ref|YP_001435683.1| - 6.7e-29 100.5 0.3 1e-28 100.0 0.1 1.4 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.8 gi|156937887|ref|YP_001435683.1| - 2.7e-15 56.9 0.0 3.8e-15 56.4 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding F-box-like_2 PF13013.6 gi|156937887|ref|YP_001435683.1| - 0.015 15.3 0.0 0.018 15.0 0.0 1.2 1 0 0 1 1 1 0 F-box-like domain CwfJ_C_1 PF04677.15 gi|156937887|ref|YP_001435683.1| - 0.016 15.1 0.1 0.022 14.6 0.1 1.4 1 1 0 1 1 1 0 Protein similar to CwfJ C-terminus 1 PALP PF00291.25 gi|156937888|ref|YP_001435684.1| - 2.6e-42 145.2 0.0 3.4e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Molybdopterin PF00384.22 gi|156937889|ref|YP_001435685.1| - 4e-06 26.0 0.0 0.00017 20.7 0.0 2.3 2 1 0 2 2 2 2 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|156937889|ref|YP_001435685.1| - 0.029 14.4 0.0 0.067 13.2 0.0 1.6 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|156937889|ref|YP_001435685.1| - 0.22 11.5 3.5 0.33 11.0 1.6 2.2 1 1 1 2 2 2 0 Molybdopterin oxidoreductase Fe4S4 domain Cys_Met_Meta_PP PF01053.20 gi|156937890|ref|YP_001435686.1| - 4.3e-122 407.3 0.0 4.9e-122 407.2 0.0 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|156937890|ref|YP_001435686.1| - 4.3e-06 26.1 0.0 7.3e-06 25.4 0.0 1.4 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|156937890|ref|YP_001435686.1| - 4.6e-05 22.5 0.0 9.8e-05 21.5 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 gi|156937890|ref|YP_001435686.1| - 0.00052 19.4 1.2 0.0041 16.5 0.8 2.2 1 1 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family PNP_UDP_1 PF01048.20 gi|156937891|ref|YP_001435687.1| - 2.1e-54 184.3 0.0 2.3e-54 184.1 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Tmemb_cc2 PF10267.9 gi|156937892|ref|YP_001435688.1| - 0.00015 21.0 5.9 0.00018 20.8 5.9 1.0 1 0 0 1 1 1 1 Predicted transmembrane and coiled-coil 2 protein Laminin_II PF06009.12 gi|156937892|ref|YP_001435688.1| - 0.019 15.0 0.4 0.031 14.3 0.4 1.4 1 0 0 1 1 1 0 Laminin Domain II NPV_P10 PF05531.12 gi|156937892|ref|YP_001435688.1| - 0.025 15.0 0.7 0.083 13.4 0.7 1.9 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein ApoLp-III PF07464.11 gi|156937892|ref|YP_001435688.1| - 0.053 13.6 0.5 0.07 13.2 0.5 1.2 1 0 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) DUF4446 PF14584.6 gi|156937892|ref|YP_001435688.1| - 0.089 12.8 1.8 0.094 12.7 0.5 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF4446) DUF4988 PF16378.5 gi|156937892|ref|YP_001435688.1| - 0.093 12.4 0.3 0.17 11.6 0.2 1.5 1 1 1 2 2 2 0 Domain of unknown function CLZ PF16526.5 gi|156937892|ref|YP_001435688.1| - 0.094 13.1 4.0 0.2 12.0 0.4 2.4 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels XhlA PF10779.9 gi|156937892|ref|YP_001435688.1| - 0.18 12.0 2.5 1.1 9.5 2.5 2.3 1 1 0 1 1 1 0 Haemolysin XhlA Prefoldin PF02996.17 gi|156937892|ref|YP_001435688.1| - 0.2 11.6 0.2 0.2 11.6 0.2 2.4 2 1 1 3 3 3 0 Prefoldin subunit Prefoldin_2 PF01920.20 gi|156937892|ref|YP_001435688.1| - 0.21 11.6 0.3 0.21 11.6 0.3 2.6 2 1 1 3 3 3 0 Prefoldin subunit DUF1664 PF07889.12 gi|156937892|ref|YP_001435688.1| - 0.24 11.5 3.0 0.14 12.2 1.0 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF5082 PF16888.5 gi|156937892|ref|YP_001435688.1| - 0.38 11.0 5.1 0.13 12.6 1.8 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) Bcr-Abl_Oligo PF09036.10 gi|156937892|ref|YP_001435688.1| - 0.66 10.0 5.0 0.33 11.0 0.6 2.3 1 1 2 3 3 3 0 Bcr-Abl oncoprotein oligomerisation domain Enkurin PF13864.6 gi|156937892|ref|YP_001435688.1| - 6.1 7.3 10.9 1.7e+02 2.7 10.9 2.4 1 1 0 1 1 1 0 Calmodulin-binding zf-ZPR1 PF03367.13 gi|156937893|ref|YP_001435689.1| - 8.3e-40 136.2 0.3 9.8e-40 136.0 0.3 1.1 1 0 0 1 1 1 1 ZPR1 zinc-finger domain DNA_RNApol_7kD PF03604.13 gi|156937893|ref|YP_001435689.1| - 0.0055 16.3 3.6 0.39 10.4 0.1 3.0 3 0 0 3 3 3 2 DNA directed RNA polymerase, 7 kDa subunit zf-H2C2_2 PF13465.6 gi|156937893|ref|YP_001435689.1| - 0.011 16.1 0.4 4.5 7.9 0.0 2.6 2 0 0 2 2 2 0 Zinc-finger double domain Zn-ribbon_8 PF09723.10 gi|156937893|ref|YP_001435689.1| - 0.016 15.3 3.7 3.8 7.7 0.1 3.7 3 1 0 3 3 3 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|156937893|ref|YP_001435689.1| - 0.025 14.0 0.9 1.8 8.1 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain UPF0547 PF10571.9 gi|156937893|ref|YP_001435689.1| - 0.025 14.6 3.6 0.22 11.7 0.3 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 PTH2 PF01981.16 gi|156937893|ref|YP_001435689.1| - 0.039 14.2 0.2 0.18 12.1 0.0 1.9 1 1 1 2 2 2 0 Peptidyl-tRNA hydrolase PTH2 zinc_ribbon_2 PF13240.6 gi|156937893|ref|YP_001435689.1| - 0.076 12.8 3.1 3.4 7.5 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain Lar_restr_allev PF14354.6 gi|156937893|ref|YP_001435689.1| - 0.097 13.1 0.2 0.23 11.9 0.2 1.7 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-C2H2 PF00096.26 gi|156937893|ref|YP_001435689.1| - 0.83 10.2 2.7 22 5.7 0.2 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type Ribosomal_L44 PF00935.19 gi|156937894|ref|YP_001435690.1| - 4.3e-28 97.6 6.3 4.3e-28 97.6 6.3 1.4 1 1 1 2 2 2 1 Ribosomal protein L44 zinc_ribbon_4 PF13717.6 gi|156937894|ref|YP_001435690.1| - 0.0024 17.8 2.4 0.063 13.2 0.2 2.3 2 0 0 2 2 2 1 zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|156937894|ref|YP_001435690.1| - 0.0028 17.3 1.5 0.0085 15.8 0.1 2.3 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit zinc_ribbon_13 PF09855.9 gi|156937894|ref|YP_001435690.1| - 0.0034 17.5 1.6 0.012 15.7 0.1 2.0 2 0 0 2 2 2 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zinc_ribbon_2 PF13240.6 gi|156937894|ref|YP_001435690.1| - 0.017 14.8 2.0 2.8 7.8 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|156937894|ref|YP_001435690.1| - 0.023 14.3 0.8 1.5 8.6 0.1 2.4 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Ribosomal_L33 PF00471.20 gi|156937894|ref|YP_001435690.1| - 0.026 15.0 0.5 0.026 15.0 0.5 2.7 2 1 1 3 3 3 0 Ribosomal protein L33 CpXC PF14353.6 gi|156937894|ref|YP_001435690.1| - 0.032 14.3 2.0 0.36 10.9 0.1 2.1 1 1 1 2 2 2 0 CpXC protein TF_Zn_Ribbon PF08271.12 gi|156937894|ref|YP_001435690.1| - 0.048 13.2 0.6 2.8 7.5 0.0 2.2 2 0 0 2 2 2 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|156937894|ref|YP_001435690.1| - 0.071 12.5 3.0 2.1 7.9 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-LITAF-like PF10601.9 gi|156937894|ref|YP_001435690.1| - 0.11 12.8 2.5 6.2 7.2 0.2 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain DZR PF12773.7 gi|156937894|ref|YP_001435690.1| - 0.11 12.5 3.3 0.28 11.2 3.3 1.6 1 1 0 1 1 1 0 Double zinc ribbon UPF0547 PF10571.9 gi|156937894|ref|YP_001435690.1| - 0.16 12.1 2.0 2.3 8.4 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_15 PF17032.5 gi|156937894|ref|YP_001435690.1| - 0.18 12.6 3.2 1.4 9.7 3.2 2.0 1 1 0 1 1 1 0 zinc-ribbon family Rubredoxin_2 PF18073.1 gi|156937894|ref|YP_001435690.1| - 0.34 10.7 4.2 0.72 9.6 0.2 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-C2H2 PF00096.26 gi|156937894|ref|YP_001435690.1| - 0.78 10.3 5.4 9.2 6.9 1.7 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type Radical_SAM PF04055.21 gi|156937895|ref|YP_001435691.1| - 3.3e-16 60.1 0.0 7.4e-16 59.0 0.0 1.6 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|156937895|ref|YP_001435691.1| - 3.2e-07 30.5 0.0 5.8e-07 29.7 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|156937895|ref|YP_001435691.1| - 9.7e-06 25.9 0.0 2.2e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|156937895|ref|YP_001435691.1| - 0.022 15.3 0.1 0.07 13.7 0.1 1.9 1 1 1 2 2 2 0 Iron-sulfur cluster-binding domain FAD_binding_3 PF01494.19 gi|156937896|ref|YP_001435692.1| - 1.5e-15 57.3 2.9 9.2e-12 44.9 0.3 2.9 2 1 0 2 2 2 2 FAD binding domain FAD_binding_2 PF00890.24 gi|156937896|ref|YP_001435692.1| - 1e-10 41.3 3.1 2.8e-05 23.4 2.6 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_oxidored PF12831.7 gi|156937896|ref|YP_001435692.1| - 6.7e-10 38.9 1.8 1.6e-09 37.6 1.8 1.6 1 1 0 1 1 1 1 FAD dependent oxidoreductase DAO PF01266.24 gi|156937896|ref|YP_001435692.1| - 4e-09 36.5 6.9 5e-05 23.0 0.9 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|156937896|ref|YP_001435692.1| - 7.8e-08 31.6 0.2 0.0021 17.0 0.0 2.3 2 0 0 2 2 2 2 Tryptophan halogenase NAD_binding_8 PF13450.6 gi|156937896|ref|YP_001435692.1| - 1.1e-06 28.8 1.7 9.6e-06 25.7 0.1 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|156937896|ref|YP_001435692.1| - 1.4e-05 24.5 3.8 0.00015 21.1 3.7 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|156937896|ref|YP_001435692.1| - 2.1e-05 23.8 0.7 4.7e-05 22.6 0.2 1.7 2 0 0 2 2 2 1 Lycopene cyclase protein Thi4 PF01946.17 gi|156937896|ref|YP_001435692.1| - 2.8e-05 23.5 1.7 4.5e-05 22.8 0.1 2.1 3 0 0 3 3 3 1 Thi4 family Pyr_redox PF00070.27 gi|156937896|ref|YP_001435692.1| - 8.7e-05 23.0 2.4 0.00029 21.4 0.7 2.4 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|156937896|ref|YP_001435692.1| - 0.0005 19.3 0.3 0.0008 18.6 0.3 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A HI0933_like PF03486.14 gi|156937896|ref|YP_001435692.1| - 0.00079 18.2 1.0 0.0014 17.4 0.7 1.6 2 0 0 2 2 2 1 HI0933-like protein 3HCDH_N PF02737.18 gi|156937896|ref|YP_001435692.1| - 0.0089 15.9 0.2 0.02 14.8 0.2 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|156937896|ref|YP_001435692.1| - 0.016 15.5 0.1 0.036 14.3 0.1 1.6 1 0 0 1 1 1 0 TrkA-N domain YjeF_N PF03853.15 gi|156937896|ref|YP_001435692.1| - 0.049 13.5 0.0 0.14 12.0 0.0 1.8 2 0 0 2 2 2 0 YjeF-related protein N-terminus AlaDh_PNT_C PF01262.21 gi|156937896|ref|YP_001435692.1| - 0.1 11.8 0.5 0.23 10.7 0.1 1.7 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain 2-Hacid_dh_C PF02826.19 gi|156937896|ref|YP_001435692.1| - 0.12 11.7 0.4 1.8 7.9 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_7 PF13241.6 gi|156937896|ref|YP_001435692.1| - 0.16 12.5 0.0 0.35 11.3 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding UDPG_MGDP_dh_N PF03721.14 gi|156937896|ref|YP_001435692.1| - 0.17 11.4 0.2 0.33 10.5 0.2 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HTH_51 PF18558.1 gi|156937896|ref|YP_001435692.1| - 0.19 11.6 0.0 0.87 9.5 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain Glyco_tran_28_C PF04101.16 gi|156937897|ref|YP_001435693.1| - 0.00093 19.2 0.0 0.0017 18.4 0.0 1.4 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain Glyco_transf_4 PF13439.6 gi|156937897|ref|YP_001435693.1| - 0.0024 17.9 0.0 0.42 10.6 0.0 2.2 2 0 0 2 2 2 2 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|156937897|ref|YP_001435693.1| - 0.02 15.3 0.1 0.87 10.0 0.0 2.2 2 0 0 2 2 2 0 Glycosyl transferase 4-like domain Metalloenzyme PF01676.18 gi|156937897|ref|YP_001435693.1| - 0.11 11.9 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 Metalloenzyme superfamily Alg14 PF08660.11 gi|156937897|ref|YP_001435693.1| - 0.17 11.8 0.3 0.57 10.1 0.0 2.0 3 0 0 3 3 3 0 Oligosaccharide biosynthesis protein Alg14 like tRNA-synt_1c PF00749.21 gi|156937898|ref|YP_001435694.1| - 1.4e-77 260.7 0.0 2.1e-77 260.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|156937898|ref|YP_001435694.1| - 4.5e-18 65.7 0.0 1.1e-17 64.4 0.0 1.7 1 1 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain DUF2573 PF10835.8 gi|156937898|ref|YP_001435694.1| - 0.032 14.5 0.1 1.4 9.3 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2573) DUF2281 PF10047.9 gi|156937898|ref|YP_001435694.1| - 0.47 11.2 2.2 2.9 8.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2281) Thioredoxin PF00085.20 gi|156937899|ref|YP_001435695.1| - 3.3e-10 39.9 0.1 3.6e-10 39.7 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Glutaredoxin PF00462.24 gi|156937899|ref|YP_001435695.1| - 0.0012 19.0 0.6 0.12 12.6 0.3 2.5 2 1 0 2 2 2 1 Glutaredoxin DUF3670 PF12419.8 gi|156937899|ref|YP_001435695.1| - 0.062 13.1 0.4 1.3 8.9 0.0 2.0 2 0 0 2 2 2 0 SNF2 Helicase protein KaiB PF07689.12 gi|156937899|ref|YP_001435695.1| - 0.086 12.6 0.1 0.13 12.0 0.1 1.3 1 0 0 1 1 1 0 KaiB domain Thioredoxin_8 PF13905.6 gi|156937899|ref|YP_001435695.1| - 0.097 13.0 0.1 0.14 12.5 0.1 1.7 1 1 0 1 1 1 0 Thioredoxin-like PPDK_N PF01326.19 gi|156937901|ref|YP_001435697.1| - 1.1e-127 425.9 0.1 1.7e-127 425.3 0.1 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|156937901|ref|YP_001435697.1| - 2.2e-83 279.8 0.0 3.6e-83 279.1 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|156937901|ref|YP_001435697.1| - 1.7e-29 101.3 0.8 4.6e-29 100.0 0.3 2.0 2 0 0 2 2 2 1 PEP-utilising enzyme, mobile domain HpcH_HpaI PF03328.14 gi|156937901|ref|YP_001435697.1| - 0.059 12.5 0.0 0.13 11.4 0.0 1.5 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family TrmB PF01978.19 gi|156937902|ref|YP_001435698.1| - 0.00092 19.0 0.6 0.0025 17.7 0.4 1.9 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF1421 PF07223.11 gi|156937902|ref|YP_001435698.1| - 0.0034 17.2 0.1 0.0071 16.1 0.1 1.5 1 0 0 1 1 1 1 UBA-like domain (DUF1421) Cas_Cas02710 PF09670.10 gi|156937902|ref|YP_001435698.1| - 0.058 12.2 0.0 0.078 11.8 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) Penicillinase_R PF03965.16 gi|156937902|ref|YP_001435698.1| - 0.08 13.3 0.0 0.17 12.2 0.0 1.5 1 0 0 1 1 1 0 Penicillinase repressor UBA PF00627.31 gi|156937902|ref|YP_001435698.1| - 0.15 12.0 0.0 2.5 8.1 0.0 2.8 3 0 0 3 3 3 0 UBA/TS-N domain 3A PF00803.18 gi|156937902|ref|YP_001435698.1| - 0.17 11.1 0.0 0.27 10.5 0.0 1.3 1 1 0 1 1 1 0 3A/RNA2 movement protein family Methyltransf_11 PF08241.12 gi|156937903|ref|YP_001435699.1| - 1.8e-11 44.5 0.1 2.5e-11 44.0 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|156937903|ref|YP_001435699.1| - 2.3e-06 28.2 0.0 4.1e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|156937903|ref|YP_001435699.1| - 0.00092 18.6 0.0 0.0018 17.6 0.0 1.4 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|156937903|ref|YP_001435699.1| - 0.0031 17.4 0.0 0.0062 16.4 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|156937903|ref|YP_001435699.1| - 0.031 13.9 0.0 0.13 11.8 0.0 1.8 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_12 PF08242.12 gi|156937903|ref|YP_001435699.1| - 0.035 14.8 0.1 0.21 12.4 0.1 2.0 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_31 PF13847.6 gi|156937903|ref|YP_001435699.1| - 0.12 12.1 0.1 0.46 10.3 0.1 1.8 1 1 0 1 1 1 0 Methyltransferase domain DUF1512 PF07431.12 gi|156937904|ref|YP_001435700.1| - 1.4e-141 471.6 5.6 1.6e-141 471.4 5.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) KH_2 PF07650.17 gi|156937904|ref|YP_001435700.1| - 0.0032 17.3 0.4 0.0032 17.3 0.4 2.8 4 0 0 4 4 4 1 KH domain KH_5 PF13184.6 gi|156937904|ref|YP_001435700.1| - 0.043 13.9 0.2 0.1 12.7 0.2 1.7 1 0 0 1 1 1 0 NusA-like KH domain FTH PF01827.27 gi|156937904|ref|YP_001435700.1| - 0.06 13.1 0.1 0.11 12.3 0.1 1.4 1 0 0 1 1 1 0 FTH domain Anthrax-tox_M PF09156.10 gi|156937904|ref|YP_001435700.1| - 0.097 12.0 0.1 0.13 11.5 0.1 1.2 1 0 0 1 1 1 0 Anthrax toxin lethal factor, middle domain DUF883 PF05957.13 gi|156937904|ref|YP_001435700.1| - 0.15 12.7 0.5 1.4 9.6 0.2 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) Helicase_RecD PF05127.14 gi|156937905|ref|YP_001435701.1| - 1.4e-39 135.7 0.0 2.5e-39 134.9 0.0 1.4 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|156937905|ref|YP_001435701.1| - 1.5e-12 47.4 0.4 0.00016 21.2 0.0 3.2 2 1 1 3 3 3 3 GNAT acetyltransferase 2 Acetyltransf_7 PF13508.7 gi|156937905|ref|YP_001435701.1| - 8e-06 26.2 0.0 3.3e-05 24.2 0.0 2.0 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain AAA_30 PF13604.6 gi|156937905|ref|YP_001435701.1| - 9.3e-05 22.2 0.1 0.00019 21.2 0.1 1.5 1 0 0 1 1 1 1 AAA domain Acetyltransf_10 PF13673.7 gi|156937905|ref|YP_001435701.1| - 0.0003 20.7 0.0 0.0025 17.8 0.0 2.1 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|156937905|ref|YP_001435701.1| - 0.00031 20.9 0.0 0.00088 19.5 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family DUF1726 PF08351.11 gi|156937905|ref|YP_001435701.1| - 0.00034 20.5 0.0 0.00084 19.2 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) AAA_16 PF13191.6 gi|156937905|ref|YP_001435701.1| - 0.0058 17.0 0.0 0.059 13.8 0.0 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|156937905|ref|YP_001435701.1| - 0.0061 16.3 0.5 0.054 13.2 0.2 2.2 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|156937905|ref|YP_001435701.1| - 0.049 13.9 0.0 0.28 11.5 0.0 2.1 1 1 0 2 2 2 0 AAA domain ANAPC2 PF08672.11 gi|156937905|ref|YP_001435701.1| - 0.076 13.5 0.1 8.8 6.9 0.0 2.9 3 0 0 3 3 3 0 Anaphase promoting complex (APC) subunit 2 PhoH PF02562.16 gi|156937905|ref|YP_001435701.1| - 0.12 11.8 0.0 0.23 10.9 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein DUF815 PF05673.13 gi|156937905|ref|YP_001435701.1| - 0.14 11.3 0.0 0.26 10.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) ABC_tran PF00005.27 gi|156937905|ref|YP_001435701.1| - 0.21 12.1 0.0 0.41 11.1 0.0 1.4 1 0 0 1 1 1 0 ABC transporter DUF5066 PF16728.5 gi|156937906|ref|YP_001435702.1| - 0.026 13.8 0.5 0.031 13.6 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF5066) HHA PF05321.11 gi|156937906|ref|YP_001435702.1| - 0.042 14.2 0.2 0.08 13.3 0.2 1.4 1 0 0 1 1 1 0 Haemolysin expression modulating protein HicB_lk_antitox PF15919.5 gi|156937906|ref|YP_001435702.1| - 0.043 13.9 0.1 0.049 13.8 0.1 1.2 1 0 0 1 1 1 0 HicB_like antitoxin of bacterial toxin-antitoxin system DUF1450 PF07293.11 gi|156937906|ref|YP_001435702.1| - 0.066 13.0 0.2 0.3 10.9 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1450) DUF5327 PF17261.2 gi|156937906|ref|YP_001435702.1| - 0.069 13.9 0.8 0.098 13.4 0.8 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5327) DUF5076 PF16826.5 gi|156937909|ref|YP_001435705.1| - 0.044 13.7 0.0 0.088 12.8 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5076) CT_C_D PF02682.16 gi|156937909|ref|YP_001435705.1| - 0.16 11.7 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 Carboxyltransferase domain, subdomain C and D FMN_bind_2 PF04299.12 gi|156937910|ref|YP_001435706.1| - 0.0097 15.6 0.0 0.013 15.3 0.0 1.1 1 0 0 1 1 1 1 Putative FMN-binding domain CM_2 PF01817.21 gi|156937910|ref|YP_001435706.1| - 0.027 14.8 1.6 0.21 12.0 0.1 2.6 3 0 0 3 3 3 0 Chorismate mutase type II SapB_1 PF05184.15 gi|156937910|ref|YP_001435706.1| - 0.058 13.4 0.6 0.13 12.3 0.6 1.7 1 0 0 1 1 1 0 Saposin-like type B, region 1 MatP_C PF17414.2 gi|156937910|ref|YP_001435706.1| - 0.65 10.2 3.1 0.63 10.3 0.5 2.0 1 1 1 2 2 2 0 MatP C-terminal ribbon-helix-helix domain Trm56 PF01994.16 gi|156937911|ref|YP_001435707.1| - 4.6e-44 149.1 0.0 5.8e-44 148.8 0.0 1.1 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 TFIIE_alpha PF02002.17 gi|156937912|ref|YP_001435708.1| - 1.3e-16 60.4 4.6 1.3e-16 60.4 4.6 2.0 2 0 0 2 2 2 1 TFIIE alpha subunit TF_Zn_Ribbon PF08271.12 gi|156937912|ref|YP_001435708.1| - 0.00014 21.3 1.9 0.00042 19.8 1.8 1.9 1 1 0 1 1 1 1 TFIIB zinc-binding TrmB PF01978.19 gi|156937912|ref|YP_001435708.1| - 0.00023 21.0 0.3 0.00054 19.8 0.3 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|156937912|ref|YP_001435708.1| - 0.00082 19.4 0.0 0.0016 18.4 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|156937912|ref|YP_001435708.1| - 0.001 19.0 0.3 0.015 15.3 0.0 2.2 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain DpnI PF06044.12 gi|156937912|ref|YP_001435708.1| - 0.0012 18.6 0.1 0.0016 18.1 0.1 1.2 1 0 0 1 1 1 1 Dam-replacing family HypA PF01155.19 gi|156937912|ref|YP_001435708.1| - 0.0015 18.5 0.2 0.003 17.6 0.0 1.5 2 0 0 2 2 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GntR PF00392.21 gi|156937912|ref|YP_001435708.1| - 0.0017 18.0 1.5 0.0035 16.9 0.0 2.3 3 0 0 3 3 3 1 Bacterial regulatory proteins, gntR family DZR PF12773.7 gi|156937912|ref|YP_001435708.1| - 0.0018 18.3 0.3 0.003 17.6 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|156937912|ref|YP_001435708.1| - 0.0021 17.4 1.2 0.77 9.3 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain zf-Mss51 PF13824.6 gi|156937912|ref|YP_001435708.1| - 0.0031 17.6 1.6 1.2 9.3 0.1 2.4 1 1 1 2 2 2 1 Zinc-finger of mitochondrial splicing suppressor 51 zf_UBZ PF18439.1 gi|156937912|ref|YP_001435708.1| - 0.004 16.7 0.6 0.33 10.6 0.1 2.4 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger Zn-ribbon_8 PF09723.10 gi|156937912|ref|YP_001435708.1| - 0.008 16.3 2.1 0.052 13.7 2.1 2.1 1 1 2 3 3 3 2 Zinc ribbon domain zf-NADH-PPase PF09297.11 gi|156937912|ref|YP_001435708.1| - 0.0083 15.8 1.8 0.41 10.4 0.1 2.5 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain HTH_36 PF13730.6 gi|156937912|ref|YP_001435708.1| - 0.009 15.9 0.0 0.022 14.7 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain Lar_restr_allev PF14354.6 gi|156937912|ref|YP_001435708.1| - 0.0099 16.2 0.2 3.1 8.2 0.0 2.3 2 0 0 2 2 2 1 Restriction alleviation protein Lar zinc_ribbon_2 PF13240.6 gi|156937912|ref|YP_001435708.1| - 0.011 15.5 2.2 0.83 9.5 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain IBR PF01485.21 gi|156937912|ref|YP_001435708.1| - 0.013 15.7 0.2 0.023 14.9 0.2 1.4 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain Stk19 PF10494.9 gi|156937912|ref|YP_001435708.1| - 0.014 15.1 0.0 0.36 10.5 0.0 2.1 1 1 1 2 2 2 0 Serine-threonine protein kinase 19 Nudix_N_2 PF14803.6 gi|156937912|ref|YP_001435708.1| - 0.014 15.3 1.2 3.6 7.6 0.2 2.5 2 0 0 2 2 2 0 Nudix N-terminal CpXC PF14353.6 gi|156937912|ref|YP_001435708.1| - 0.018 15.1 1.6 1.5 8.9 0.1 2.4 1 1 1 2 2 2 0 CpXC protein YacG PF03884.14 gi|156937912|ref|YP_001435708.1| - 0.019 14.7 0.3 1.8 8.4 0.2 2.3 2 0 0 2 2 2 0 DNA gyrase inhibitor YacG HOIP-UBA PF16678.5 gi|156937912|ref|YP_001435708.1| - 0.026 14.5 0.2 0.086 12.9 0.0 1.9 2 0 0 2 2 2 0 HOIP UBA domain pair DprA_WH PF17782.1 gi|156937912|ref|YP_001435708.1| - 0.031 14.4 0.0 0.064 13.4 0.0 1.6 1 0 0 1 1 1 0 DprA winged helix domain Rrf2 PF02082.20 gi|156937912|ref|YP_001435708.1| - 0.036 14.4 1.3 0.24 11.8 0.0 2.7 3 1 0 3 3 3 0 Transcriptional regulator AnfG_VnfG PF03139.15 gi|156937912|ref|YP_001435708.1| - 0.036 14.1 0.1 0.087 12.9 0.1 1.7 1 1 0 1 1 1 0 Vanadium/alternative nitrogenase delta subunit zf-TFIIB PF13453.6 gi|156937912|ref|YP_001435708.1| - 0.036 13.4 1.1 2.2 7.7 0.3 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger Fe_dep_repr_C PF02742.15 gi|156937912|ref|YP_001435708.1| - 0.049 13.7 2.1 0.059 13.5 0.1 2.1 3 0 0 3 3 2 0 Iron dependent repressor, metal binding and dimerisation domain DUF1610 PF07754.11 gi|156937912|ref|YP_001435708.1| - 0.049 13.6 6.2 1.2 9.2 0.5 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zinc-ribbons_6 PF07191.12 gi|156937912|ref|YP_001435708.1| - 0.05 13.6 0.4 0.1 12.6 0.4 1.4 1 0 0 1 1 1 0 zinc-ribbons Fe_dep_repress PF01325.19 gi|156937912|ref|YP_001435708.1| - 0.067 13.4 0.0 0.22 11.8 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|156937912|ref|YP_001435708.1| - 0.098 12.6 0.1 0.26 11.2 0.0 1.8 2 0 0 2 2 1 0 MarR family zf-FPG_IleRS PF06827.14 gi|156937912|ref|YP_001435708.1| - 0.099 12.5 0.9 1.5 8.8 0.0 2.3 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Rota_VP4_MID PF17477.2 gi|156937912|ref|YP_001435708.1| - 0.1 11.9 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Rotavirus VP4 membrane interaction domain Zn_Tnp_IS1595 PF12760.7 gi|156937912|ref|YP_001435708.1| - 0.14 12.2 3.5 3.5 7.7 0.4 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Elf1 PF05129.13 gi|156937912|ref|YP_001435708.1| - 0.16 12.0 1.3 7.8 6.6 0.1 2.3 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like zinc_ribbon_4 PF13717.6 gi|156937912|ref|YP_001435708.1| - 0.17 11.8 1.2 1.4 8.9 1.3 2.3 1 1 1 2 2 2 0 zinc-ribbon domain zf-C2H2_4 PF13894.6 gi|156937912|ref|YP_001435708.1| - 0.21 12.5 1.3 12 7.1 0.1 2.5 2 0 0 2 2 2 0 C2H2-type zinc finger MarR PF01047.22 gi|156937912|ref|YP_001435708.1| - 0.23 11.4 0.0 0.23 11.4 0.0 2.1 3 0 0 3 3 2 0 MarR family OrfB_Zn_ribbon PF07282.11 gi|156937912|ref|YP_001435708.1| - 0.27 11.2 2.2 1.6 8.7 0.8 2.6 2 1 2 4 4 3 0 Putative transposase DNA-binding domain DUF4187 PF13821.6 gi|156937912|ref|YP_001435708.1| - 0.32 10.8 6.2 0.18 11.6 1.6 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4187) zf-CSL PF05207.13 gi|156937912|ref|YP_001435708.1| - 0.35 10.6 3.1 1.6 8.5 0.1 2.5 1 1 1 2 2 2 0 CSL zinc finger DNA_ligase_ZBD PF03119.16 gi|156937912|ref|YP_001435708.1| - 0.45 10.6 6.1 1.9 8.5 1.3 2.7 2 1 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain DUF3797 PF12677.7 gi|156937912|ref|YP_001435708.1| - 0.74 9.7 3.8 1.2 9.1 0.1 2.5 3 0 0 3 3 2 0 Domain of unknown function (DUF3797) zf_C2H2_10 PF18414.1 gi|156937912|ref|YP_001435708.1| - 1.1 8.8 3.0 2.6 7.7 0.1 2.1 2 0 0 2 2 2 0 C2H2 type zinc-finger zf-Di19 PF05605.12 gi|156937912|ref|YP_001435708.1| - 1.2 9.5 3.2 18 5.7 0.1 2.3 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding zinc_ribbon_9 PF14369.6 gi|156937912|ref|YP_001435708.1| - 1.5 9.1 4.6 9.2 6.6 0.2 2.3 1 1 1 2 2 2 0 zinc-ribbon Trm112p PF03966.16 gi|156937912|ref|YP_001435708.1| - 4 8.1 5.1 15 6.2 1.2 2.7 2 1 0 2 2 2 0 Trm112p-like protein DNA_methylase PF00145.17 gi|156937913|ref|YP_001435709.1| - 1.2e-50 172.7 0.0 3.4e-33 115.4 0.0 2.1 1 1 0 2 2 2 2 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|156937913|ref|YP_001435709.1| - 0.0053 16.4 0.0 0.01 15.4 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Multi_ubiq PF14452.6 gi|156937914|ref|YP_001435710.1| - 0.081 13.2 0.0 3.1 8.1 0.0 2.3 2 0 0 2 2 2 0 Multiubiquitin Hjc PF01870.18 gi|156937915|ref|YP_001435711.1| - 4.1e-22 78.0 0.0 5.3e-22 77.6 0.0 1.1 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 gi|156937915|ref|YP_001435711.1| - 0.018 14.6 0.0 0.027 14.0 0.0 1.3 1 0 0 1 1 1 0 REase_AHJR-like RecU PF03838.14 gi|156937915|ref|YP_001435711.1| - 0.031 14.3 0.0 0.033 14.2 0.0 1.2 1 0 0 1 1 1 0 Recombination protein U DUF3883 PF13020.6 gi|156937915|ref|YP_001435711.1| - 0.047 13.7 0.0 0.069 13.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3883) eIF-5a PF01287.20 gi|156937916|ref|YP_001435712.1| - 8.5e-09 35.4 0.0 1.3e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|156937916|ref|YP_001435712.1| - 2.1e-07 30.9 0.1 5e-07 29.6 0.1 1.7 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 gi|156937916|ref|YP_001435712.1| - 0.0019 18.2 0.0 0.0036 17.3 0.0 1.5 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain Cytochrom_D1 PF02239.16 gi|156937916|ref|YP_001435712.1| - 0.11 11.0 0.0 0.23 10.0 0.0 1.4 1 1 0 1 1 1 0 Cytochrome D1 heme domain RNA_lig_T4_1 PF09511.10 gi|156937917|ref|YP_001435713.1| - 7.7e-27 94.6 0.0 1.2e-26 94.0 0.0 1.3 1 0 0 1 1 1 1 RNA ligase CorA PF01544.18 gi|156937917|ref|YP_001435713.1| - 0.014 14.7 0.1 0.034 13.5 0.1 1.5 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein TPPII PF12580.8 gi|156937917|ref|YP_001435713.1| - 0.12 11.8 0.6 0.59 9.6 0.6 2.0 1 1 0 1 1 1 0 Tripeptidyl peptidase II NUMOD4 PF07463.11 gi|156937917|ref|YP_001435713.1| - 0.13 12.5 0.2 0.34 11.1 0.0 1.8 2 0 0 2 2 2 0 NUMOD4 motif Cytochrome_cB PF11783.8 gi|156937918|ref|YP_001435714.1| - 6.8e-20 71.7 0.8 6.8e-20 71.7 0.8 4.4 4 1 0 4 4 4 1 Cytochrome c bacterial Cytochrome_C7 PF14522.6 gi|156937918|ref|YP_001435714.1| - 6.2e-15 54.9 14.9 4e-06 26.7 5.0 4.6 4 1 0 4 4 4 4 Cytochrome c7 and related cytochrome c Cytochrom_c3_2 PF14537.6 gi|156937918|ref|YP_001435714.1| - 6.5e-06 26.5 27.4 0.036 14.5 10.7 5.7 4 2 0 4 4 4 2 Cytochrome c3 Cytochrome_C554 PF13435.6 gi|156937918|ref|YP_001435714.1| - 2e-05 25.4 26.1 0.37 11.8 2.2 6.1 3 2 3 6 6 6 4 Cytochrome c554 and c-prime Paired_CXXCH_1 PF09699.10 gi|156937918|ref|YP_001435714.1| - 0.00015 21.4 37.5 0.51 10.1 0.2 7.1 5 2 1 6 6 6 3 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_CIII PF02085.16 gi|156937918|ref|YP_001435714.1| - 0.00022 21.5 22.5 0.0097 16.2 7.0 4.9 3 1 1 4 4 4 1 Class III cytochrome C family Cytochrome_CBB3 PF13442.6 gi|156937918|ref|YP_001435714.1| - 0.0066 16.7 24.9 2.1 8.7 0.3 7.7 4 1 3 7 7 7 2 Cytochrome C oxidase, cbb3-type, subunit III Neuropep_like PF15161.6 gi|156937918|ref|YP_001435714.1| - 9.7 5.9 17.4 2.3 8.0 0.2 4.8 5 0 0 5 5 5 0 Neuropeptide-like GCD14 PF08704.10 gi|156937919|ref|YP_001435715.1| - 1.6e-11 44.4 0.0 2.4e-11 43.8 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_11 PF08241.12 gi|156937919|ref|YP_001435715.1| - 1.9e-05 25.2 0.0 3.6e-05 24.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|156937919|ref|YP_001435715.1| - 0.00037 20.3 0.0 0.00047 20.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|156937919|ref|YP_001435715.1| - 0.00044 20.9 0.0 0.00084 20.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain GCD14_N PF14801.6 gi|156937919|ref|YP_001435715.1| - 0.0012 18.7 0.1 0.0019 18.0 0.1 1.3 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit N-term PCMT PF01135.19 gi|156937919|ref|YP_001435715.1| - 0.017 14.8 0.0 0.024 14.4 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Csa1 PF06023.12 gi|156937920|ref|YP_001435716.1| - 6.3e-56 189.9 0.0 1.3e-36 126.4 0.0 2.0 1 1 1 2 2 2 2 CRISPR-associated exonuclease Csa1 PDDEXK_1 PF12705.7 gi|156937920|ref|YP_001435716.1| - 0.0097 15.8 0.0 2.7 7.8 0.0 2.1 2 0 0 2 2 2 2 PD-(D/E)XK nuclease superfamily Exo5 PF09810.9 gi|156937920|ref|YP_001435716.1| - 0.054 13.0 0.0 0.089 12.3 0.0 1.3 1 0 0 1 1 1 0 Exonuclease V - a 5' deoxyribonuclease Cas_Cas1 PF01867.16 gi|156937921|ref|YP_001435717.1| - 2.8e-49 167.8 0.0 3.6e-49 167.4 0.0 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.9 gi|156937922|ref|YP_001435718.1| - 1.5e-15 57.1 0.8 1.7e-15 56.9 0.8 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas2 PB1 PF00564.24 gi|156937922|ref|YP_001435718.1| - 0.079 12.9 0.0 0.097 12.6 0.0 1.1 1 0 0 1 1 1 0 PB1 domain eIF3g PF12353.8 gi|156937922|ref|YP_001435718.1| - 0.13 12.7 0.1 0.15 12.5 0.1 1.3 1 1 0 1 1 1 0 Eukaryotic translation initiation factor 3 subunit G Cas_Cas4 PF01930.17 gi|156937923|ref|YP_001435719.1| - 9.7e-09 35.5 0.0 1.1e-08 35.3 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|156937923|ref|YP_001435719.1| - 2e-06 27.9 1.3 3e-06 27.3 0.3 1.8 1 1 1 2 2 2 1 PD-(D/E)XK nuclease superfamily DUF2800 PF10926.8 gi|156937923|ref|YP_001435719.1| - 0.01 15.1 0.0 0.03 13.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2800) HSDR_N_2 PF13588.6 gi|156937923|ref|YP_001435719.1| - 0.077 13.0 0.0 0.12 12.3 0.0 1.2 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) HD PF01966.22 gi|156937924|ref|YP_001435720.1| - 5.2e-08 33.2 1.2 1e-07 32.2 1.2 1.7 1 1 0 1 1 1 1 HD domain HDOD PF08668.12 gi|156937924|ref|YP_001435720.1| - 0.0011 18.4 0.0 0.012 15.1 0.0 2.2 2 0 0 2 2 2 1 HDOD domain HD_6 PF18019.1 gi|156937924|ref|YP_001435720.1| - 0.0014 18.7 0.3 0.0036 17.5 0.3 1.6 1 1 0 1 1 1 1 HD domain TAL_effector PF03377.13 gi|156937924|ref|YP_001435720.1| - 1.5 9.2 5.1 2.3 8.6 0.1 3.6 5 0 0 5 5 5 0 TAL effector repeat Helicase_C PF00271.31 gi|156937925|ref|YP_001435721.1| - 5.8e-12 45.9 0.0 2.1e-11 44.1 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|156937925|ref|YP_001435721.1| - 4.2e-07 29.9 0.0 0.00033 20.5 0.0 3.7 3 1 0 3 3 3 1 DEAD/DEAH box helicase Ago_PAZ PF18309.1 gi|156937925|ref|YP_001435721.1| - 0.11 13.1 0.1 4.2 8.1 0.0 2.5 2 0 0 2 2 2 0 Argonaute PAZ domain Ribosomal_S30AE PF02482.19 gi|156937926|ref|YP_001435722.1| - 0.0069 17.2 0.2 0.016 16.0 0.2 1.6 1 0 0 1 1 1 1 Sigma 54 modulation protein / S30EA ribosomal protein Cas_Cas5d PF09704.10 gi|156937927|ref|YP_001435723.1| - 0.00088 19.2 0.4 0.005 16.8 0.4 2.0 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DevR PF01905.16 gi|156937928|ref|YP_001435724.1| - 9.7e-83 277.3 0.0 1.2e-82 277.0 0.0 1.1 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 Cas_Csa5 PF09702.10 gi|156937929|ref|YP_001435725.1| - 3.8e-06 27.1 0.0 5.8e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csa5) IL5 PF02025.15 gi|156937929|ref|YP_001435725.1| - 0.097 13.0 0.7 0.32 11.3 0.2 2.0 2 0 0 2 2 2 0 Interleukin 5 TrmB PF01978.19 gi|156937930|ref|YP_001435726.1| - 5e-11 42.3 0.1 8.2e-11 41.6 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|156937930|ref|YP_001435726.1| - 3.7e-06 26.4 0.1 6e-06 25.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|156937930|ref|YP_001435726.1| - 0.00011 22.1 0.0 0.00018 21.4 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|156937930|ref|YP_001435726.1| - 0.00016 21.5 0.0 0.00027 20.8 0.0 1.3 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|156937930|ref|YP_001435726.1| - 0.00031 20.6 0.1 0.00075 19.3 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|156937930|ref|YP_001435726.1| - 0.00032 20.3 0.0 0.00052 19.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family FeoC PF09012.10 gi|156937930|ref|YP_001435726.1| - 0.00076 19.5 0.0 0.0028 17.7 0.0 1.8 2 0 0 2 2 2 1 FeoC like transcriptional regulator Fe_dep_repress PF01325.19 gi|156937930|ref|YP_001435726.1| - 0.0008 19.6 0.0 0.0015 18.7 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.6 gi|156937930|ref|YP_001435726.1| - 0.0012 18.6 0.1 0.0035 17.1 0.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4423) TFIIE_alpha PF02002.17 gi|156937930|ref|YP_001435726.1| - 0.0013 18.6 0.0 0.0021 17.9 0.0 1.3 1 0 0 1 1 1 1 TFIIE alpha subunit PaaX PF07848.12 gi|156937930|ref|YP_001435726.1| - 0.0018 18.5 0.0 0.0031 17.7 0.0 1.3 1 0 0 1 1 1 1 PaaX-like protein HTH_10 PF04967.12 gi|156937930|ref|YP_001435726.1| - 0.0022 17.7 0.0 0.004 16.9 0.0 1.3 1 0 0 1 1 1 1 HTH DNA binding domain AbiEi_4 PF13338.6 gi|156937930|ref|YP_001435726.1| - 0.0023 18.0 0.0 0.0037 17.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin MarR_2 PF12802.7 gi|156937930|ref|YP_001435726.1| - 0.0027 17.5 0.0 0.005 16.7 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|156937930|ref|YP_001435726.1| - 0.0042 17.1 0.1 0.008 16.2 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|156937930|ref|YP_001435726.1| - 0.0053 17.2 0.0 0.011 16.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Tnp_ISL3 PF13542.6 gi|156937930|ref|YP_001435726.1| - 0.0072 15.7 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 gi|156937930|ref|YP_001435726.1| - 0.0089 16.0 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|156937930|ref|YP_001435726.1| - 0.0096 16.0 0.0 0.021 15.0 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|156937930|ref|YP_001435726.1| - 0.01 16.2 0.0 0.018 15.4 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_23 PF13384.6 gi|156937930|ref|YP_001435726.1| - 0.018 14.9 0.0 0.038 13.8 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|156937930|ref|YP_001435726.1| - 0.031 14.3 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain PadR PF03551.14 gi|156937930|ref|YP_001435726.1| - 0.06 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_AsnC-type PF13404.6 gi|156937930|ref|YP_001435726.1| - 0.12 12.2 0.1 0.21 11.4 0.1 1.4 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HxlR PF01638.17 gi|156937930|ref|YP_001435726.1| - 0.16 11.8 0.0 0.34 10.8 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_psq PF05225.16 gi|156937930|ref|YP_001435726.1| - 0.17 11.7 0.0 0.32 10.8 0.0 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain Lon_C PF05362.13 gi|156937931|ref|YP_001435727.1| - 1.3e-06 28.1 0.5 2.4e-06 27.3 0.5 1.4 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain UME PF08064.13 gi|156937931|ref|YP_001435727.1| - 0.04 13.8 0.0 0.073 13.0 0.0 1.4 1 0 0 1 1 1 0 UME (NUC010) domain NADHdh PF00146.21 gi|156937932|ref|YP_001435728.1| - 3.8e-71 239.8 17.1 5e-71 239.5 17.1 1.2 1 0 0 1 1 1 1 NADH dehydrogenase DUF1118 PF06549.12 gi|156937932|ref|YP_001435728.1| - 0.028 14.7 1.3 0.058 13.7 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1118) Fer4 PF00037.27 gi|156937933|ref|YP_001435729.1| - 6.4e-13 47.9 17.1 3.9e-08 32.8 6.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156937933|ref|YP_001435729.1| - 4.4e-11 43.2 11.0 9.1e-11 42.2 11.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156937933|ref|YP_001435729.1| - 2.3e-10 40.5 21.1 3.2e-08 33.6 9.6 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156937933|ref|YP_001435729.1| - 1.7e-09 37.2 11.4 2.4e-06 27.3 1.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156937933|ref|YP_001435729.1| - 1.7e-09 37.6 19.4 9.5e-08 32.0 11.5 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156937933|ref|YP_001435729.1| - 1.8e-08 35.2 3.3 0.00093 20.1 0.2 2.6 2 1 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|156937933|ref|YP_001435729.1| - 1.9e-07 30.9 14.4 2.1e-05 24.4 5.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|156937933|ref|YP_001435729.1| - 4.2e-07 30.4 1.4 0.0039 17.7 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156937933|ref|YP_001435729.1| - 8.9e-07 29.3 8.4 0.0038 17.7 1.5 2.4 2 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156937933|ref|YP_001435729.1| - 3.9e-06 26.9 13.1 0.001 19.4 4.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156937933|ref|YP_001435729.1| - 8.5e-06 25.8 10.6 2.3e-05 24.4 10.6 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|156937933|ref|YP_001435729.1| - 7.6e-05 23.5 2.6 0.16 12.8 1.3 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|156937933|ref|YP_001435729.1| - 0.00012 22.8 23.3 0.049 14.6 10.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|156937933|ref|YP_001435729.1| - 0.00093 19.4 7.0 0.072 13.3 0.2 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156937933|ref|YP_001435729.1| - 0.0024 18.6 14.8 0.028 15.1 1.8 3.0 2 1 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|156937933|ref|YP_001435729.1| - 0.015 15.8 13.5 0.032 14.8 2.7 2.6 3 0 0 3 3 2 0 4Fe-4S single cluster domain of Ferredoxin I Oxidored_q3 PF00499.20 gi|156937934|ref|YP_001435730.1| - 5.1e-13 49.0 14.1 6.8e-13 48.6 14.1 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 7tm_3 PF00003.22 gi|156937934|ref|YP_001435730.1| - 0.0029 17.4 7.6 0.0083 15.9 7.6 1.6 1 1 0 1 1 1 1 7 transmembrane sweet-taste receptor of 3 GCPR DUF4536 PF15055.6 gi|156937934|ref|YP_001435730.1| - 0.13 12.5 7.2 0.16 12.3 0.9 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4536) DUF1616 PF07760.11 gi|156937934|ref|YP_001435730.1| - 1.4 8.3 11.5 63 2.8 11.5 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1616) Oxidored_q2 PF00420.24 gi|156937935|ref|YP_001435731.1| - 2.4e-06 27.1 4.7 3.5e-06 26.6 4.7 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DUF4231 PF14015.6 gi|156937935|ref|YP_001435731.1| - 0.17 12.4 3.7 0.17 12.3 3.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF4231) Proton_antipo_M PF00361.20 gi|156937936|ref|YP_001435732.1| - 2.5e-27 95.8 34.5 6.4e-27 94.5 34.5 1.7 1 0 0 1 1 1 1 Proton-conducting membrane transporter DUF1435 PF07256.12 gi|156937936|ref|YP_001435732.1| - 0.065 13.3 8.9 0.079 13.1 1.6 3.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1435) Arv1 PF04161.13 gi|156937936|ref|YP_001435732.1| - 0.096 12.8 6.2 0.17 12.0 5.6 1.6 1 1 0 1 1 1 0 Arv1-like family APH PF01636.23 gi|156937937|ref|YP_001435733.1| - 0.063 13.2 0.1 0.16 11.8 0.1 1.9 1 1 0 1 1 1 0 Phosphotransferase enzyme family GTP_EFTU PF00009.27 gi|156937938|ref|YP_001435734.1| - 9.2e-55 185.2 0.0 1.3e-54 184.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|156937938|ref|YP_001435734.1| - 2.2e-36 124.6 0.3 2.2e-35 121.4 0.1 2.5 3 0 0 3 3 3 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|156937938|ref|YP_001435734.1| - 2.2e-16 60.0 3.4 4.4e-16 59.0 2.0 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|156937938|ref|YP_001435734.1| - 1.9e-05 24.7 0.0 0.00019 21.5 0.0 2.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|156937938|ref|YP_001435734.1| - 0.0021 17.9 1.8 0.0071 16.2 1.8 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 Septin PF00735.18 gi|156937938|ref|YP_001435734.1| - 0.052 12.8 0.0 0.14 11.4 0.0 1.6 1 1 0 1 1 1 0 Septin FlpD PF02662.16 gi|156937938|ref|YP_001435734.1| - 0.085 12.9 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Methyl-viologen-reducing hydrogenase, delta subunit SRPRB PF09439.10 gi|156937938|ref|YP_001435734.1| - 0.13 11.7 0.1 2.5 7.5 0.0 2.2 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit Dynamin_N PF00350.23 gi|156937938|ref|YP_001435734.1| - 0.15 12.1 0.1 3.8 7.6 0.0 2.5 2 1 0 2 2 2 0 Dynamin family CRISPR_Cas6 PF10040.9 gi|156937939|ref|YP_001435735.1| - 0.00047 20.8 0.1 0.00075 20.1 0.1 1.3 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 tRNA_deacylase PF04414.12 gi|156937940|ref|YP_001435736.1| - 2.4e-66 223.2 0.0 3e-66 222.9 0.0 1.0 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase RVT_3 PF13456.6 gi|156937941|ref|YP_001435737.1| - 2.7e-18 66.0 0.0 3.3e-18 65.7 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|156937941|ref|YP_001435737.1| - 9.6e-08 32.3 0.0 2e-07 31.3 0.0 1.5 1 1 0 1 1 1 1 RNase H tRNA-synt_1g PF09334.11 gi|156937943|ref|YP_001435739.1| - 1.5e-149 498.1 0.0 1.8e-149 497.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|156937943|ref|YP_001435739.1| - 1.3e-11 43.5 0.6 5.1e-10 38.2 0.0 3.0 2 2 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|156937943|ref|YP_001435739.1| - 9.1e-10 38.7 0.0 1.8e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|156937943|ref|YP_001435739.1| - 0.0058 16.0 0.0 0.037 13.4 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain DZR PF12773.7 gi|156937943|ref|YP_001435739.1| - 0.14 12.2 4.2 0.28 11.2 4.2 1.5 1 0 0 1 1 1 0 Double zinc ribbon zf-C2HC5 PF06221.13 gi|156937943|ref|YP_001435739.1| - 0.48 10.4 1.9 2 8.5 0.1 2.2 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-ribbon_3 PF13248.6 gi|156937943|ref|YP_001435739.1| - 1.3 8.6 9.6 1.2 8.7 3.8 2.8 1 1 1 2 2 2 0 zinc-ribbon domain GvpK PF05121.12 gi|156937944|ref|YP_001435740.1| - 0.0056 16.7 1.0 3.1 7.9 0.0 3.3 3 1 0 3 3 3 1 Gas vesicle protein K IFT57 PF10498.9 gi|156937944|ref|YP_001435740.1| - 0.066 12.2 1.8 0.9 8.4 0.7 2.1 2 0 0 2 2 2 0 Intra-flagellar transport protein 57 Snf7 PF03357.21 gi|156937944|ref|YP_001435740.1| - 0.088 12.4 2.9 0.15 11.7 2.9 1.4 1 1 0 1 1 1 0 Snf7 Osmo_CC PF08946.10 gi|156937944|ref|YP_001435740.1| - 1.1 9.6 8.7 1.1 9.6 0.2 3.2 3 0 0 3 3 3 0 Osmosensory transporter coiled coil DUF1624 PF07786.12 gi|156937946|ref|YP_001435742.1| - 0.026 14.1 0.4 0.026 14.1 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1624) NTP_transferase PF00483.23 gi|156937947|ref|YP_001435743.1| - 4.6e-38 131.2 0.0 5.6e-38 130.9 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|156937947|ref|YP_001435743.1| - 5.6e-14 52.8 0.0 8.2e-14 52.3 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|156937947|ref|YP_001435743.1| - 0.00058 19.7 0.0 0.00074 19.3 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NiFe_hyd_3_EhaA PF17367.2 gi|156937948|ref|YP_001435744.1| - 0.04 14.0 0.8 0.043 14.0 0.8 1.1 1 0 0 1 1 1 0 NiFe-hydrogenase-type-3 Eha complex subunit A DUF2244 PF10003.9 gi|156937949|ref|YP_001435745.1| - 1.6 8.4 5.9 1.8 8.3 5.9 1.0 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) MS_channel PF00924.18 gi|156937949|ref|YP_001435745.1| - 2.4 7.7 7.6 2.8 7.4 7.6 1.1 1 0 0 1 1 1 0 Mechanosensitive ion channel TGT_C2 PF14810.6 gi|156937950|ref|YP_001435746.1| - 2.8e-16 59.4 0.0 4.2e-16 58.8 0.0 1.2 1 0 0 1 1 1 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|156937950|ref|YP_001435746.1| - 1.7e-09 37.5 0.4 2.8e-09 36.8 0.4 1.4 1 0 0 1 1 1 1 PUA domain PAC2 PF09754.9 gi|156937951|ref|YP_001435747.1| - 1.5e-34 119.9 0.0 1.8e-34 119.7 0.0 1.0 1 0 0 1 1 1 1 PAC2 family RNA_pol_RpbG PF16992.5 gi|156937953|ref|YP_001435749.1| - 4.3e-21 75.2 1.0 4.9e-21 75.0 1.0 1.0 1 0 0 1 1 1 1 DNA-directed RNA polymerase, subunit G LPG_synthase_TM PF03706.13 gi|156937954|ref|YP_001435750.1| - 3.9e-16 59.5 24.6 3.9e-16 59.5 24.6 1.4 1 1 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF2118 PF09891.9 gi|156937955|ref|YP_001435751.1| - 1.3e-52 177.7 4.9 1.5e-52 177.6 4.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2118) polyprenyl_synt PF00348.17 gi|156937956|ref|YP_001435752.1| - 1.1e-70 237.7 0.0 1.6e-70 237.1 0.0 1.3 1 0 0 1 1 1 1 Polyprenyl synthetase TackOD1 PF18551.1 gi|156937957|ref|YP_001435753.1| - 5e-36 124.1 0.5 6.6e-36 123.7 0.5 1.2 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 zinc-ribbons_6 PF07191.12 gi|156937957|ref|YP_001435753.1| - 8.4e-05 22.5 4.1 0.016 15.2 1.0 2.3 2 0 0 2 2 2 2 zinc-ribbons zf-ribbon_3 PF13248.6 gi|156937957|ref|YP_001435753.1| - 9.3e-05 21.7 10.2 0.0016 17.7 0.6 3.6 3 0 0 3 3 3 1 zinc-ribbon domain DZR PF12773.7 gi|156937957|ref|YP_001435753.1| - 0.00023 21.1 7.1 0.0082 16.1 1.1 2.5 1 1 2 3 3 3 2 Double zinc ribbon PhnA_Zn_Ribbon PF08274.12 gi|156937957|ref|YP_001435753.1| - 0.00045 20.1 4.1 2 8.4 2.3 3.9 2 1 0 2 2 2 1 PhnA Zinc-Ribbon Zn-ribbon_8 PF09723.10 gi|156937957|ref|YP_001435753.1| - 0.00052 20.1 16.8 0.2 11.8 0.5 5.1 4 1 1 5 5 5 3 Zinc ribbon domain DUF35_N PF12172.8 gi|156937957|ref|YP_001435753.1| - 0.039 13.8 8.9 0.049 13.5 0.9 3.3 3 0 0 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) OrfB_Zn_ribbon PF07282.11 gi|156937957|ref|YP_001435753.1| - 0.087 12.8 10.9 1.6 8.7 1.0 3.5 3 0 0 3 3 3 0 Putative transposase DNA-binding domain HypA PF01155.19 gi|156937957|ref|YP_001435753.1| - 0.11 12.5 8.7 2.7 8.0 0.2 3.3 1 1 2 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Sgf11 PF08209.11 gi|156937957|ref|YP_001435753.1| - 0.14 11.7 12.2 2.1 8.0 0.5 4.2 4 0 0 4 4 4 0 Sgf11 (transcriptional regulation protein) DUF2757 PF10955.8 gi|156937957|ref|YP_001435753.1| - 0.17 12.1 0.7 3 8.2 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2757) Trm112p PF03966.16 gi|156937957|ref|YP_001435753.1| - 0.25 12.0 6.9 7.5 7.2 0.6 3.9 2 1 1 3 3 3 0 Trm112p-like protein TF_Zn_Ribbon PF08271.12 gi|156937957|ref|YP_001435753.1| - 0.28 10.7 15.7 0.15 11.6 1.4 4.1 3 2 0 3 3 3 0 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 gi|156937957|ref|YP_001435753.1| - 0.58 9.9 4.9 50 3.8 0.5 3.7 3 0 0 3 3 3 0 A2L zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|156937957|ref|YP_001435753.1| - 1.3 9.1 15.3 0.92 9.5 0.7 3.9 3 1 1 4 4 4 0 Transposase zinc-ribbon domain zf-CHY PF05495.12 gi|156937957|ref|YP_001435753.1| - 2.4 8.7 6.5 5.4 7.6 2.3 2.4 1 1 1 2 2 2 0 CHY zinc finger zf-RRN7 PF11781.8 gi|156937957|ref|YP_001435753.1| - 3.7 7.3 9.2 2.6 7.8 1.6 3.2 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Nudix_N_2 PF14803.6 gi|156937957|ref|YP_001435753.1| - 4.3 7.4 12.5 18 5.4 0.3 4.4 4 0 0 4 4 4 0 Nudix N-terminal FYVE PF01363.21 gi|156937957|ref|YP_001435753.1| - 6.6 7.0 9.6 15 5.8 0.1 2.5 2 1 0 2 2 2 0 FYVE zinc finger zinc_ribbon_2 PF13240.6 gi|156937957|ref|YP_001435753.1| - 9.1 6.1 17.9 0.98 9.2 0.3 3.8 4 0 0 4 4 4 0 zinc-ribbon domain DUF87 PF01935.17 gi|156937958|ref|YP_001435754.1| - 6.3e-32 111.5 0.0 1.2e-31 110.6 0.0 1.4 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|156937958|ref|YP_001435754.1| - 8.6e-08 31.2 0.0 0.00056 18.6 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|156937958|ref|YP_001435754.1| - 1.3e-07 30.9 0.0 2e-05 23.7 0.0 2.2 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.15 gi|156937958|ref|YP_001435754.1| - 5.3e-06 26.5 0.0 4.9e-05 23.4 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit T4SS-DNA_transf PF02534.14 gi|156937958|ref|YP_001435754.1| - 0.00012 21.0 0.0 0.00018 20.4 0.0 1.2 1 0 0 1 1 1 1 Type IV secretory system Conjugative DNA transfer FtsK_SpoIIIE PF01580.18 gi|156937958|ref|YP_001435754.1| - 0.0063 15.9 0.2 4.3 6.6 0.0 2.6 3 0 0 3 3 3 2 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|156937958|ref|YP_001435754.1| - 0.041 14.1 0.0 2.2 8.6 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|156937958|ref|YP_001435754.1| - 0.048 12.6 0.1 0.12 11.3 0.0 1.6 2 0 0 2 2 2 0 AAA-like domain HAS-barrel PF09378.10 gi|156937958|ref|YP_001435754.1| - 0.05 13.7 0.1 0.2 11.8 0.1 2.1 1 0 0 1 1 1 0 HAS barrel domain DEAD PF00270.29 gi|156937958|ref|YP_001435754.1| - 0.056 13.2 0.0 0.24 11.1 0.0 2.0 2 0 0 2 2 2 0 DEAD/DEAH box helicase CbiA PF01656.23 gi|156937958|ref|YP_001435754.1| - 0.1 12.7 0.0 0.33 11.0 0.0 1.9 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_19 PF13245.6 gi|156937958|ref|YP_001435754.1| - 0.13 12.6 0.1 1.1 9.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain Lactamase_B_2 PF12706.7 gi|156937959|ref|YP_001435755.1| - 2.3e-19 69.7 0.0 3.1e-19 69.3 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156937959|ref|YP_001435755.1| - 6.6e-06 26.3 0.0 1.3e-05 25.4 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|156937959|ref|YP_001435755.1| - 0.0017 18.2 0.0 0.0049 16.8 0.0 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|156937959|ref|YP_001435755.1| - 0.021 14.2 0.0 0.04 13.4 0.0 1.4 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain DEAD_assoc PF08494.11 gi|156937960|ref|YP_001435756.1| - 2.6e-54 183.9 0.0 5e-54 183.0 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|156937960|ref|YP_001435756.1| - 2.8e-30 105.4 0.0 9.8e-29 100.3 0.0 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|156937960|ref|YP_001435756.1| - 8e-21 74.5 0.2 7.8e-20 71.3 0.1 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|156937960|ref|YP_001435756.1| - 2.9e-09 37.2 0.0 9.8e-09 35.4 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 gi|156937960|ref|YP_001435756.1| - 0.0071 15.1 0.0 0.014 14.2 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Transketolase_C PF02780.20 gi|156937960|ref|YP_001435756.1| - 0.011 15.6 0.0 0.055 13.4 0.0 2.2 1 0 0 1 1 1 0 Transketolase, C-terminal domain GTP_cyclohydro2 PF00925.20 gi|156937960|ref|YP_001435756.1| - 0.016 14.9 0.0 0.04 13.5 0.0 1.6 1 0 0 1 1 1 0 GTP cyclohydrolase II AAA_11 PF13086.6 gi|156937960|ref|YP_001435756.1| - 0.053 13.3 0.0 0.34 10.6 0.0 2.2 1 1 1 2 2 2 0 AAA domain PhoH PF02562.16 gi|156937960|ref|YP_001435756.1| - 0.072 12.5 0.1 0.33 10.4 0.0 2.1 2 0 0 2 2 2 0 PhoH-like protein AAA_19 PF13245.6 gi|156937960|ref|YP_001435756.1| - 0.2 12.0 1.9 4.6 7.6 0.4 3.2 2 1 0 2 2 2 0 AAA domain RNR_Alpha PF17975.1 gi|156937960|ref|YP_001435756.1| - 0.41 11.2 2.1 1 9.9 0.4 2.5 2 1 0 2 2 2 0 Ribonucleotide reductase alpha domain Fe-ADH_2 PF13685.6 gi|156937962|ref|YP_001435758.1| - 2e-68 230.8 0.0 2.5e-68 230.5 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|156937962|ref|YP_001435758.1| - 1.2e-27 96.7 0.4 3.5e-26 91.9 0.4 2.1 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|156937962|ref|YP_001435758.1| - 2.5e-08 33.4 1.7 2.7e-06 26.7 1.7 2.9 1 1 0 1 1 1 1 3-dehydroquinate synthase Ribosomal_L18A PF01775.17 gi|156937963|ref|YP_001435759.1| - 5.3e-09 36.2 0.0 9.6e-09 35.4 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Vsr PF03852.15 gi|156937963|ref|YP_001435759.1| - 0.048 13.5 0.0 0.071 13.0 0.0 1.3 1 0 0 1 1 1 0 DNA mismatch endonuclease Vsr Prefoldin PF02996.17 gi|156937964|ref|YP_001435760.1| - 3.1e-14 52.9 9.6 4.7e-14 52.3 9.6 1.3 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_2 PF01920.20 gi|156937964|ref|YP_001435760.1| - 7.3e-09 35.5 12.1 9.4e-06 25.5 1.0 2.2 1 1 1 2 2 2 2 Prefoldin subunit Seryl_tRNA_N PF02403.22 gi|156937964|ref|YP_001435760.1| - 0.00075 19.7 12.1 0.039 14.2 1.4 2.1 2 0 0 2 2 2 2 Seryl-tRNA synthetase N-terminal domain SKI PF01202.22 gi|156937964|ref|YP_001435760.1| - 0.0016 18.5 0.1 0.0023 18.1 0.1 1.3 1 1 0 1 1 1 1 Shikimate kinase GAS PF13851.6 gi|156937964|ref|YP_001435760.1| - 0.0024 17.3 12.2 0.064 12.6 0.3 2.0 2 0 0 2 2 2 2 Growth-arrest specific micro-tubule binding Cortex-I_coil PF09304.10 gi|156937964|ref|YP_001435760.1| - 0.0092 16.2 0.6 0.0092 16.2 0.6 2.2 2 0 0 2 2 2 1 Cortexillin I, coiled coil Nsp1_C PF05064.13 gi|156937964|ref|YP_001435760.1| - 0.012 15.4 1.0 0.012 15.4 1.0 2.0 2 0 0 2 2 2 0 Nsp1-like C-terminal region FbpA PF05833.11 gi|156937964|ref|YP_001435760.1| - 0.018 13.8 2.2 0.018 13.8 2.2 2.0 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) APG6_N PF17675.1 gi|156937964|ref|YP_001435760.1| - 0.028 15.0 3.1 0.028 15.0 3.1 2.7 2 1 0 2 2 2 0 Apg6 coiled-coil region NPV_P10 PF05531.12 gi|156937964|ref|YP_001435760.1| - 0.029 14.8 2.1 0.15 12.5 0.2 2.3 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein TMF_TATA_bd PF12325.8 gi|156937964|ref|YP_001435760.1| - 0.029 14.6 10.8 1.1 9.5 4.7 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding TPD52 PF04201.15 gi|156937964|ref|YP_001435760.1| - 0.029 14.0 0.6 0.029 14.0 0.6 2.1 2 1 0 2 2 2 0 Tumour protein D52 family DUF3287 PF11690.8 gi|156937964|ref|YP_001435760.1| - 0.034 13.9 0.2 0.058 13.1 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF3287) TLE_N PF03920.15 gi|156937964|ref|YP_001435760.1| - 0.034 14.2 4.3 2.6 8.1 0.9 2.2 2 0 0 2 2 2 0 Groucho/TLE N-terminal Q-rich domain DUF1043 PF06295.12 gi|156937964|ref|YP_001435760.1| - 0.042 13.8 3.9 0.058 13.4 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) TPR_MLP1_2 PF07926.12 gi|156937964|ref|YP_001435760.1| - 0.043 13.9 16.9 0.22 11.6 2.2 2.2 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 gi|156937964|ref|YP_001435760.1| - 0.044 13.8 4.4 1.7 8.6 0.4 2.1 2 0 0 2 2 2 0 Laminin Domain II DUF1664 PF07889.12 gi|156937964|ref|YP_001435760.1| - 0.046 13.8 1.9 0.32 11.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF4407 PF14362.6 gi|156937964|ref|YP_001435760.1| - 0.055 12.8 6.4 0.064 12.6 0.9 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) DUF4140 PF13600.6 gi|156937964|ref|YP_001435760.1| - 0.057 13.8 0.3 0.057 13.8 0.3 2.8 2 1 1 3 3 3 0 N-terminal domain of unknown function (DUF4140) ZapB PF06005.12 gi|156937964|ref|YP_001435760.1| - 0.066 13.7 22.1 0.99 9.9 4.4 2.5 2 0 0 2 2 2 0 Cell division protein ZapB Fib_alpha PF08702.10 gi|156937964|ref|YP_001435760.1| - 0.078 13.2 2.3 0.46 10.7 0.1 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family DUF3450 PF11932.8 gi|156937964|ref|YP_001435760.1| - 0.078 12.3 9.8 1.1 8.5 2.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) Spc7 PF08317.11 gi|156937964|ref|YP_001435760.1| - 0.11 11.4 15.0 0.18 10.6 1.4 2.0 2 0 0 2 2 2 0 Spc7 kinetochore protein DUF4201 PF13870.6 gi|156937964|ref|YP_001435760.1| - 0.15 11.8 10.5 0.15 11.8 0.9 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4201) DUF16 PF01519.16 gi|156937964|ref|YP_001435760.1| - 0.17 12.4 9.1 0.26 11.8 1.9 2.2 1 1 1 2 2 2 0 Protein of unknown function DUF16 Uds1 PF15456.6 gi|156937964|ref|YP_001435760.1| - 0.21 11.8 6.6 0.48 10.6 6.6 1.7 1 1 0 1 1 1 0 Up-regulated During Septation Lectin_N PF03954.14 gi|156937964|ref|YP_001435760.1| - 0.26 11.0 2.9 0.48 10.2 0.2 2.1 2 0 0 2 2 2 0 Hepatic lectin, N-terminal domain DUF812 PF05667.11 gi|156937964|ref|YP_001435760.1| - 0.32 9.8 8.2 1.2 7.9 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF812) DUF5082 PF16888.5 gi|156937964|ref|YP_001435760.1| - 0.36 11.1 6.0 4.2 7.7 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) DUF3251 PF11622.8 gi|156937964|ref|YP_001435760.1| - 0.42 10.2 2.5 0.46 10.1 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3251) YlqD PF11068.8 gi|156937964|ref|YP_001435760.1| - 0.46 10.9 9.5 0.6 10.5 0.6 2.2 2 0 0 2 2 2 0 YlqD protein DUF4446 PF14584.6 gi|156937964|ref|YP_001435760.1| - 0.53 10.3 3.2 2.6 8.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) zf-C4H2 PF10146.9 gi|156937964|ref|YP_001435760.1| - 0.65 10.3 7.4 0.9 9.8 1.8 2.1 2 0 0 2 2 2 0 Zinc finger-containing protein YabA PF06156.13 gi|156937964|ref|YP_001435760.1| - 0.65 10.7 8.3 2.9 8.6 0.2 2.5 2 1 0 2 2 2 0 Initiation control protein YabA DivIC PF04977.15 gi|156937964|ref|YP_001435760.1| - 0.69 9.7 17.7 0.49 10.2 4.5 3.0 2 1 1 3 3 3 0 Septum formation initiator DUF724 PF05266.14 gi|156937964|ref|YP_001435760.1| - 0.84 9.4 7.2 0.74 9.6 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DLP_helical PF18709.1 gi|156937964|ref|YP_001435760.1| - 0.94 8.6 6.4 0.2 10.8 0.2 2.0 2 0 0 2 2 2 0 Dynamin-like helical domain AAA_13 PF13166.6 gi|156937964|ref|YP_001435760.1| - 1.1 7.9 10.7 4 6.0 10.7 1.7 1 1 0 1 1 1 0 AAA domain NTP_transf_5 PF14907.6 gi|156937964|ref|YP_001435760.1| - 1.5 8.4 4.5 1.3 8.6 0.2 2.0 2 0 0 2 2 2 0 Uncharacterised nucleotidyltransferase CpxA_peri PF16527.5 gi|156937964|ref|YP_001435760.1| - 1.5 9.2 3.7 7 7.0 0.3 2.2 2 0 0 2 2 2 0 Two-component sensor protein CpxA, periplasmic domain FapA PF03961.13 gi|156937964|ref|YP_001435760.1| - 1.7 7.1 11.2 4.6 5.7 4.2 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A Med30 PF11315.8 gi|156937964|ref|YP_001435760.1| - 2.2 8.5 8.2 27 5.0 8.2 2.4 1 1 0 1 1 1 0 Mediator complex subunit 30 FlaC_arch PF05377.11 gi|156937964|ref|YP_001435760.1| - 2.3 8.7 6.3 5.9 7.4 0.8 2.7 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) THOC7 PF05615.13 gi|156937964|ref|YP_001435760.1| - 2.5 8.4 10.4 1.3 9.3 0.6 2.1 2 0 0 2 2 2 0 Tho complex subunit 7 DUF3782 PF12644.7 gi|156937964|ref|YP_001435760.1| - 3.1 8.0 5.9 2.7 8.2 1.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3782) ADIP PF11559.8 gi|156937964|ref|YP_001435760.1| - 3.2 7.8 12.6 0.44 10.6 1.7 2.1 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding CENP-H PF05837.12 gi|156937964|ref|YP_001435760.1| - 3.9 7.9 14.6 1.4 9.4 4.5 2.2 1 1 0 2 2 2 0 Centromere protein H (CENP-H) HIP1_clath_bdg PF16515.5 gi|156937964|ref|YP_001435760.1| - 4.2 8.0 16.3 9.2 6.9 1.4 2.2 2 0 0 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DUF4795 PF16043.5 gi|156937964|ref|YP_001435760.1| - 6 6.4 9.8 78 2.8 9.8 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) DUF4164 PF13747.6 gi|156937964|ref|YP_001435760.1| - 6.5 7.1 16.3 0.26 11.6 4.3 2.8 2 2 0 2 2 2 0 Domain of unknown function (DUF4164) 5_nucleotid PF05761.14 gi|156937964|ref|YP_001435760.1| - 8.2 5.2 6.1 1.8e+02 0.8 6.1 2.0 1 1 0 1 1 1 0 5' nucleotidase family SRP54 PF00448.22 gi|156937965|ref|YP_001435761.1| - 2.5e-77 259.0 0.5 3.6e-77 258.4 0.5 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|156937965|ref|YP_001435761.1| - 9.4e-08 32.2 4.8 9.4e-08 32.2 4.8 2.1 2 0 0 2 2 2 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 gi|156937965|ref|YP_001435761.1| - 3.7e-05 23.5 2.3 5.7e-05 22.9 2.3 1.3 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|156937965|ref|YP_001435761.1| - 0.00011 21.3 2.5 0.00022 20.3 1.3 2.1 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|156937965|ref|YP_001435761.1| - 0.00098 19.2 0.1 0.0038 17.3 0.0 2.0 2 2 0 2 2 2 1 50S ribosome-binding GTPase cobW PF02492.19 gi|156937965|ref|YP_001435761.1| - 0.0012 18.4 1.0 0.0048 16.5 1.0 1.9 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 gi|156937965|ref|YP_001435761.1| - 0.0024 18.3 0.1 0.01 16.3 0.1 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 gi|156937965|ref|YP_001435761.1| - 0.0052 16.5 2.1 0.021 14.5 0.3 2.6 2 1 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|156937965|ref|YP_001435761.1| - 0.0076 16.2 0.9 0.13 12.1 0.3 2.4 1 1 1 2 2 2 1 NTPase AAA PF00004.29 gi|156937965|ref|YP_001435761.1| - 0.0081 16.6 0.0 0.022 15.2 0.0 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|156937965|ref|YP_001435761.1| - 0.011 16.1 1.4 0.015 15.7 0.2 1.8 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 gi|156937965|ref|YP_001435761.1| - 0.012 15.7 0.0 0.023 14.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 gi|156937965|ref|YP_001435761.1| - 0.016 15.5 0.0 0.042 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|156937965|ref|YP_001435761.1| - 0.022 15.2 2.0 0.033 14.6 0.0 2.4 2 1 0 2 2 2 0 AAA domain CbiA PF01656.23 gi|156937965|ref|YP_001435761.1| - 0.023 14.7 6.5 0.13 12.3 1.6 3.3 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain DAP3 PF10236.9 gi|156937965|ref|YP_001435761.1| - 0.034 13.3 0.0 0.062 12.4 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 SL4P PF17618.2 gi|156937965|ref|YP_001435761.1| - 0.1 12.6 0.0 0.3 11.1 0.0 1.7 1 0 0 1 1 1 0 Uncharacterized Strongylid L4 protein AAA_18 PF13238.6 gi|156937965|ref|YP_001435761.1| - 0.16 12.5 0.5 6.6 7.3 0.0 3.1 3 1 0 3 3 3 0 AAA domain Spc7 PF08317.11 gi|156937965|ref|YP_001435761.1| - 0.38 9.6 5.7 0.52 9.1 5.7 1.1 1 0 0 1 1 1 0 Spc7 kinetochore protein SecE PF00584.20 gi|156937966|ref|YP_001435762.1| - 0.00021 21.2 0.1 0.00025 20.9 0.1 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Spt5-NGN PF03439.13 gi|156937967|ref|YP_001435763.1| - 2.5e-19 68.9 0.3 6.8e-19 67.5 0.0 1.8 2 1 1 3 3 3 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|156937967|ref|YP_001435763.1| - 0.015 15.2 0.5 0.039 13.9 0.5 1.7 1 0 0 1 1 1 0 KOW motif Ribosomal_L11_N PF03946.14 gi|156937968|ref|YP_001435764.1| - 6.9e-17 61.1 1.6 1.7e-16 59.8 0.7 1.9 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|156937968|ref|YP_001435764.1| - 7.3e-15 55.2 0.1 1.2e-14 54.6 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain P22_AR_N PF10547.9 gi|156937968|ref|YP_001435764.1| - 0.057 13.8 0.0 0.091 13.1 0.0 1.3 1 0 0 1 1 1 0 P22_AR N-terminal domain Flavi_glycop_C PF02832.16 gi|156937968|ref|YP_001435764.1| - 0.094 12.9 0.4 0.26 11.5 0.1 1.8 2 0 0 2 2 2 0 Flavivirus glycoprotein, immunoglobulin-like domain Ribosomal_L1 PF00687.21 gi|156937969|ref|YP_001435765.1| - 7.8e-38 130.3 0.2 9.5e-38 130.0 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L10 PF00466.20 gi|156937970|ref|YP_001435766.1| - 1.7e-23 82.7 1.9 1.7e-23 82.7 1.9 1.9 2 0 0 2 2 2 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|156937970|ref|YP_001435766.1| - 4.8e-22 77.7 0.2 1.1e-21 76.6 0.2 1.6 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|156937970|ref|YP_001435766.1| - 8.5e-05 23.1 16.7 0.00012 22.5 14.6 2.2 1 1 1 2 2 2 1 60s Acidic ribosomal protein mIF3 PF14877.6 gi|156937970|ref|YP_001435766.1| - 0.045 13.4 0.2 0.1 12.3 0.2 1.5 1 0 0 1 1 1 0 Mitochondrial translation initiation factor RNA_Me_trans PF04252.13 gi|156937971|ref|YP_001435767.1| - 2.9e-40 138.0 0.0 3.4e-40 137.8 0.0 1.0 1 0 0 1 1 1 1 Predicted SAM-dependent RNA methyltransferase TRM PF02005.16 gi|156937972|ref|YP_001435768.1| - 9.5e-85 285.0 0.0 1.2e-84 284.7 0.0 1.1 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 gi|156937972|ref|YP_001435768.1| - 2e-09 37.5 0.0 2.9e-09 37.0 0.0 1.2 1 0 0 1 1 1 1 Met-10+ like-protein Cons_hypoth95 PF03602.15 gi|156937972|ref|YP_001435768.1| - 1.2e-08 34.8 0.0 2.2e-08 34.0 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 PrmA PF06325.13 gi|156937972|ref|YP_001435768.1| - 4.3e-07 29.6 0.0 6.4e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DUF2067 PF09840.9 gi|156937972|ref|YP_001435768.1| - 0.00015 21.4 0.1 0.00033 20.3 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) Methyltransf_16 PF10294.9 gi|156937972|ref|YP_001435768.1| - 0.0058 16.4 0.0 0.0087 15.8 0.0 1.2 1 0 0 1 1 1 1 Lysine methyltransferase MTS PF05175.14 gi|156937972|ref|YP_001435768.1| - 0.011 15.3 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_15 PF09445.10 gi|156937972|ref|YP_001435768.1| - 0.012 15.2 0.0 0.034 13.7 0.0 1.6 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|156937972|ref|YP_001435768.1| - 0.026 15.2 0.0 0.088 13.5 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_3 PF01596.17 gi|156937972|ref|YP_001435768.1| - 0.1 11.8 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 O-methyltransferase Methyltransf_31 PF13847.6 gi|156937972|ref|YP_001435768.1| - 0.12 12.2 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Lactamase_B PF00753.27 gi|156937974|ref|YP_001435770.1| - 3.2e-07 30.6 0.1 5.2e-07 29.9 0.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Flavodoxin_1 PF00258.25 gi|156937974|ref|YP_001435770.1| - 8.1e-06 26.1 0.1 2e-05 24.9 0.1 1.7 1 1 0 1 1 1 1 Flavodoxin Lactamase_B_2 PF12706.7 gi|156937974|ref|YP_001435770.1| - 1.2e-05 24.9 0.0 2.5e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Peripla_BP_6 PF13458.6 gi|156937974|ref|YP_001435770.1| - 0.001 18.8 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 Periplasmic binding protein FMN_red PF03358.15 gi|156937974|ref|YP_001435770.1| - 0.15 11.8 0.0 0.42 10.3 0.0 1.8 2 0 0 2 2 2 0 NADPH-dependent FMN reductase CheB_methylest PF01339.17 gi|156937974|ref|YP_001435770.1| - 0.18 11.5 0.0 0.38 10.5 0.0 1.5 1 0 0 1 1 1 0 CheB methylesterase Epimerase PF01370.21 gi|156937975|ref|YP_001435771.1| - 1e-07 31.7 0.0 1.4e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|156937975|ref|YP_001435771.1| - 0.0024 17.0 0.1 0.019 14.0 0.1 2.3 1 1 0 1 1 1 1 RmlD substrate binding domain NAD_binding_4 PF07993.12 gi|156937975|ref|YP_001435771.1| - 0.015 14.5 0.0 0.036 13.2 0.0 1.7 2 0 0 2 2 2 0 Male sterility protein NAD_binding_10 PF13460.6 gi|156937975|ref|YP_001435771.1| - 0.015 15.2 0.0 0.019 14.8 0.0 1.4 1 1 0 1 1 1 0 NAD(P)H-binding DUF799 PF05643.11 gi|156937975|ref|YP_001435771.1| - 0.067 12.8 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Putative bacterial lipoprotein (DUF799) FmdE PF02663.14 gi|156937975|ref|YP_001435771.1| - 0.079 13.0 0.0 0.11 12.5 0.0 1.3 1 0 0 1 1 1 0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Sigma70_r4 PF04545.16 gi|156937976|ref|YP_001435772.1| - 0.073 12.6 0.2 0.14 11.7 0.2 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 MR_MLE_C PF13378.6 gi|156937977|ref|YP_001435773.1| - 4.6e-28 98.3 0.0 7.3e-28 97.6 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MTS PF05175.14 gi|156937978|ref|YP_001435774.1| - 0.0026 17.3 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 gi|156937978|ref|YP_001435774.1| - 0.015 15.1 0.0 0.039 13.7 0.0 1.6 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_25 PF13649.6 gi|156937978|ref|YP_001435774.1| - 0.019 15.6 0.0 0.043 14.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_21 PF05050.12 gi|156937978|ref|YP_001435774.1| - 0.045 13.8 0.0 0.083 12.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase FkbM domain DOT1 PF08123.13 gi|156937978|ref|YP_001435774.1| - 0.082 12.4 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Histone methylation protein DOT1 Methyltransf_11 PF08241.12 gi|156937978|ref|YP_001435774.1| - 0.14 12.9 0.0 0.33 11.6 0.0 1.7 1 0 0 1 1 1 0 Methyltransferase domain GDPD PF03009.17 gi|156937979|ref|YP_001435775.1| - 1.2e-22 81.0 0.0 1.6e-13 51.0 0.0 2.1 1 1 1 2 2 2 2 Glycerophosphoryl diester phosphodiesterase family PI-PLC-X PF00388.19 gi|156937979|ref|YP_001435775.1| - 0.02 14.5 0.0 0.029 13.9 0.0 1.3 1 0 0 1 1 1 0 Phosphatidylinositol-specific phospholipase C, X domain TPR_2 PF07719.17 gi|156937979|ref|YP_001435775.1| - 0.067 13.3 0.5 0.88 9.8 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Metallophos_2 PF12850.7 gi|156937980|ref|YP_001435776.1| - 4e-24 85.7 0.0 4.6e-24 85.5 0.0 1.0 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|156937980|ref|YP_001435776.1| - 8.1e-18 64.7 0.1 7.9e-15 54.9 0.0 2.9 2 1 1 3 3 3 1 Metallophosphoesterase, calcineurin superfamily Metallophos PF00149.28 gi|156937980|ref|YP_001435776.1| - 3.5e-07 30.9 0.8 1.2e-05 25.9 0.8 2.2 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase baeRF_family2 PF18844.1 gi|156937980|ref|YP_001435776.1| - 0.042 13.9 1.9 6.1 6.9 0.1 2.8 2 1 1 3 3 3 0 Bacterial archaeo-eukaryotic release factor family 2 HEM4 PF02602.15 gi|156937980|ref|YP_001435776.1| - 0.083 12.2 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Uroporphyrinogen-III synthase HemD Methyltransf_25 PF13649.6 gi|156937981|ref|YP_001435777.1| - 1.5e-19 70.4 0.0 3.1e-19 69.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|156937981|ref|YP_001435777.1| - 7e-16 58.7 0.0 1.6e-15 57.5 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|156937981|ref|YP_001435777.1| - 1.2e-13 51.1 0.0 1.6e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|156937981|ref|YP_001435777.1| - 3.9e-10 39.8 0.0 9.6e-10 38.5 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|156937981|ref|YP_001435777.1| - 1.1e-09 38.9 0.0 2e-09 38.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|156937981|ref|YP_001435777.1| - 7.6e-08 32.0 0.0 1.4e-07 31.1 0.0 1.4 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|156937981|ref|YP_001435777.1| - 3.7e-06 26.5 0.0 5.6e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_32 PF13679.6 gi|156937981|ref|YP_001435777.1| - 4.5e-06 26.7 0.0 6.6e-06 26.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|156937981|ref|YP_001435777.1| - 5.7e-05 22.6 0.0 7.1e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|156937981|ref|YP_001435777.1| - 0.00016 21.3 0.0 0.00025 20.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain PCMT PF01135.19 gi|156937981|ref|YP_001435777.1| - 0.00017 21.4 0.0 0.00026 20.8 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) TPMT PF05724.11 gi|156937981|ref|YP_001435777.1| - 0.00044 20.0 0.0 0.00065 19.4 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_18 PF12847.7 gi|156937981|ref|YP_001435777.1| - 0.00046 20.2 0.0 0.00097 19.1 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|156937981|ref|YP_001435777.1| - 0.00047 19.6 0.0 0.00072 19.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) N6_N4_Mtase PF01555.18 gi|156937981|ref|YP_001435777.1| - 0.0012 18.6 0.0 0.0021 17.8 0.0 1.4 1 0 0 1 1 1 1 DNA methylase TehB PF03848.14 gi|156937981|ref|YP_001435777.1| - 0.0014 18.1 0.0 0.0021 17.5 0.0 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_15 PF09445.10 gi|156937981|ref|YP_001435777.1| - 0.0017 18.0 0.0 0.0024 17.4 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase NodS PF05401.11 gi|156937981|ref|YP_001435777.1| - 0.0019 17.8 0.0 0.0026 17.4 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) UPF0020 PF01170.18 gi|156937981|ref|YP_001435777.1| - 0.0084 15.8 0.0 0.019 14.7 0.0 1.6 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 Met_10 PF02475.16 gi|156937981|ref|YP_001435777.1| - 0.011 15.5 0.0 0.013 15.3 0.0 1.2 1 0 0 1 1 1 0 Met-10+ like-protein tRNA_U5-meth_tr PF05958.11 gi|156937981|ref|YP_001435777.1| - 0.049 12.6 0.0 0.087 11.8 0.0 1.3 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase Methyltransf_33 PF10017.9 gi|156937981|ref|YP_001435777.1| - 0.065 12.4 0.0 0.17 11.0 0.0 1.7 2 1 0 2 2 2 0 Histidine-specific methyltransferase, SAM-dependent N2227 PF07942.12 gi|156937981|ref|YP_001435777.1| - 0.088 12.0 0.0 0.15 11.2 0.0 1.3 1 0 0 1 1 1 0 N2227-like protein UDPG_MGDP_dh_N PF03721.14 gi|156937981|ref|YP_001435777.1| - 0.12 11.9 0.0 1.4 8.4 0.0 2.0 2 0 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Methyltr_RsmB-F PF01189.17 gi|156937981|ref|YP_001435777.1| - 0.14 11.8 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F TUG-UBL1 PF11470.8 gi|156937981|ref|YP_001435777.1| - 0.18 12.1 0.0 8.4 6.7 0.0 2.2 2 0 0 2 2 2 0 TUG ubiquitin-like domain DUF11 PF01345.18 gi|156937982|ref|YP_001435778.1| - 0.051 13.9 0.1 0.072 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF11 SIT PF15330.6 gi|156937982|ref|YP_001435778.1| - 0.082 13.4 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 SHP2-interacting transmembrane adaptor protein, SIT Kdo PF06293.14 gi|156937983|ref|YP_001435779.1| - 0.17 11.2 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Ribosomal_L34e PF01199.18 gi|156937984|ref|YP_001435780.1| - 4.1e-28 97.5 4.6 4.4e-28 97.4 4.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L34e DUF4428 PF14471.6 gi|156937984|ref|YP_001435780.1| - 0.0027 17.6 0.8 0.27 11.2 0.2 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4428) zf-C4_ClpX PF06689.13 gi|156937984|ref|YP_001435780.1| - 0.086 12.7 0.1 5.8 6.9 0.0 2.2 2 0 0 2 2 2 0 ClpX C4-type zinc finger zf-CCHC_2 PF13696.6 gi|156937984|ref|YP_001435780.1| - 4.6 7.1 7.1 1.3 9.0 1.2 2.2 2 0 0 2 2 2 0 Zinc knuckle AAA_17 PF13207.6 gi|156937985|ref|YP_001435781.1| - 6.9e-35 120.4 0.1 9.3e-35 120.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|156937985|ref|YP_001435781.1| - 1e-10 42.2 0.0 1.3e-10 41.9 0.0 1.2 1 0 0 1 1 1 1 AAA domain 6PF2K PF01591.18 gi|156937985|ref|YP_001435781.1| - 1.4e-06 27.8 0.0 1.6e-06 27.6 0.0 1.1 1 0 0 1 1 1 1 6-phosphofructo-2-kinase Thymidylate_kin PF02223.17 gi|156937985|ref|YP_001435781.1| - 4.6e-06 26.4 0.4 3.7e-05 23.5 0.4 2.1 1 1 0 1 1 1 1 Thymidylate kinase NTPase_1 PF03266.15 gi|156937985|ref|YP_001435781.1| - 7.5e-06 25.9 5.1 2e-05 24.6 3.3 2.5 1 1 1 2 2 2 1 NTPase SRP54 PF00448.22 gi|156937985|ref|YP_001435781.1| - 8.3e-06 25.6 0.0 1.5e-05 24.7 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 gi|156937985|ref|YP_001435781.1| - 2.1e-05 24.3 0.9 2.1e-05 24.3 0.9 1.7 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 gi|156937985|ref|YP_001435781.1| - 3e-05 23.2 0.8 5.1e-05 22.4 0.8 1.4 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB KTI12 PF08433.10 gi|156937985|ref|YP_001435781.1| - 5.1e-05 22.9 0.2 8.9e-05 22.1 0.2 1.4 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_28 PF13521.6 gi|156937985|ref|YP_001435781.1| - 9.8e-05 22.6 0.2 0.00021 21.6 0.1 1.5 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 gi|156937985|ref|YP_001435781.1| - 0.0011 18.8 0.0 0.0018 18.1 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_33 PF13671.6 gi|156937985|ref|YP_001435781.1| - 0.0013 18.9 0.8 0.0067 16.6 0.7 2.1 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|156937985|ref|YP_001435781.1| - 0.0038 17.3 0.0 0.0041 17.2 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_16 PF13191.6 gi|156937985|ref|YP_001435781.1| - 0.0055 17.1 0.0 0.0071 16.8 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_26 PF13500.6 gi|156937985|ref|YP_001435781.1| - 0.0059 16.5 2.8 0.24 11.2 0.4 2.8 2 1 1 3 3 3 1 AAA domain AAA_19 PF13245.6 gi|156937985|ref|YP_001435781.1| - 0.0067 16.8 1.9 0.018 15.4 1.9 1.8 1 1 0 1 1 1 1 AAA domain DUF2075 PF09848.9 gi|156937985|ref|YP_001435781.1| - 0.0072 15.6 0.0 0.0072 15.6 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) MobB PF03205.14 gi|156937985|ref|YP_001435781.1| - 0.0075 16.2 0.1 0.016 15.1 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 gi|156937985|ref|YP_001435781.1| - 0.011 15.4 0.0 0.023 14.4 0.0 1.5 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|156937985|ref|YP_001435781.1| - 0.015 15.6 0.1 0.027 14.8 0.1 1.4 1 1 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|156937985|ref|YP_001435781.1| - 0.018 14.9 0.3 0.034 14.0 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase Lipoprotein_9 PF03180.14 gi|156937985|ref|YP_001435781.1| - 0.018 14.1 0.1 0.04 13.0 0.1 1.5 1 0 0 1 1 1 0 NLPA lipoprotein ATPase_2 PF01637.18 gi|156937985|ref|YP_001435781.1| - 0.019 14.9 0.0 0.042 13.8 0.0 1.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 gi|156937985|ref|YP_001435781.1| - 0.026 14.1 0.2 0.041 13.4 0.2 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 gi|156937985|ref|YP_001435781.1| - 0.028 14.8 1.5 0.081 13.3 1.5 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ParA PF10609.9 gi|156937985|ref|YP_001435781.1| - 0.029 13.8 1.1 0.06 12.8 0.9 1.4 1 1 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Glyco_trans_4_2 PF13477.6 gi|156937985|ref|YP_001435781.1| - 0.052 13.6 0.2 0.58 10.2 0.0 2.4 3 0 0 3 3 3 0 Glycosyl transferase 4-like PepSY_2 PF13670.6 gi|156937985|ref|YP_001435781.1| - 0.15 12.0 0.1 0.15 12.0 0.1 2.0 2 0 0 2 2 2 0 Peptidase propeptide and YPEB domain Viral_helicase1 PF01443.18 gi|156937985|ref|YP_001435781.1| - 0.19 11.4 0.2 0.32 10.7 0.2 1.4 1 1 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_31 PF13614.6 gi|156937985|ref|YP_001435781.1| - 0.21 11.5 1.1 0.57 10.1 1.2 1.7 1 1 1 2 2 2 0 AAA domain SecY PF00344.20 gi|156937986|ref|YP_001435782.1| - 2.8e-56 191.0 13.9 2.8e-56 191.0 13.9 1.4 2 0 0 2 2 2 1 SecY translocase Plug_translocon PF10559.9 gi|156937986|ref|YP_001435782.1| - 1.3e-08 34.5 0.6 4.2e-08 32.9 0.6 2.0 1 0 0 1 1 1 1 Plug domain of Sec61p DUF4191 PF13829.6 gi|156937986|ref|YP_001435782.1| - 0.12 11.7 3.4 6 6.1 0.3 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4191) Hist_deacetyl PF00850.19 gi|156937987|ref|YP_001435783.1| - 9.5e-77 258.5 0.0 1.5e-76 257.8 0.0 1.3 1 1 0 1 1 1 1 Histone deacetylase domain SBP_bac_5 PF00496.22 gi|156937988|ref|YP_001435784.1| - 1.9e-30 106.1 8.4 1.2e-25 90.3 0.5 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle MG2 PF01835.19 gi|156937988|ref|YP_001435784.1| - 2.1e-07 31.3 0.0 6.1e-07 29.8 0.0 1.8 1 0 0 1 1 1 1 MG2 domain YtkA PF13115.6 gi|156937988|ref|YP_001435784.1| - 0.00097 19.7 0.7 0.0034 17.9 0.7 2.0 1 0 0 1 1 1 1 YtkA-like MoaC PF01967.21 gi|156937989|ref|YP_001435785.1| - 5.4e-46 156.1 0.7 6e-46 155.9 0.7 1.0 1 0 0 1 1 1 1 MoaC family FecCD PF01032.18 gi|156937990|ref|YP_001435786.1| - 3e-34 118.4 24.2 3.6e-34 118.2 24.2 1.0 1 0 0 1 1 1 1 FecCD transport family Peripla_BP_2 PF01497.18 gi|156937991|ref|YP_001435787.1| - 8.6e-20 71.3 0.0 1.1e-19 71.0 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein CbiA PF01656.23 gi|156937992|ref|YP_001435788.1| - 5.5e-13 49.1 0.0 8.6e-13 48.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|156937992|ref|YP_001435788.1| - 1.3e-08 34.6 0.0 4.1e-06 26.4 0.0 2.2 2 0 0 2 2 2 2 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|156937992|ref|YP_001435788.1| - 1.1e-07 31.9 0.0 3.2e-07 30.4 0.0 1.8 2 0 0 2 2 2 1 AAA domain ArsA_ATPase PF02374.15 gi|156937992|ref|YP_001435788.1| - 0.0029 16.8 0.2 0.016 14.4 0.0 1.9 2 0 0 2 2 2 1 Anion-transporting ATPase SRP54 PF00448.22 gi|156937992|ref|YP_001435788.1| - 0.008 15.8 0.0 0.11 12.1 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain CBP_BcsQ PF06564.12 gi|156937992|ref|YP_001435788.1| - 0.042 13.3 0.0 0.097 12.1 0.0 1.5 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|156937992|ref|YP_001435788.1| - 0.047 13.1 0.1 4 6.8 0.0 2.3 2 1 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VirC1 PF07015.11 gi|156937992|ref|YP_001435788.1| - 0.053 12.8 0.4 0.34 10.2 0.1 2.0 2 0 0 2 2 2 0 VirC1 protein MipZ PF09140.11 gi|156937992|ref|YP_001435788.1| - 0.056 12.7 0.1 0.16 11.2 0.0 1.7 2 0 0 2 2 2 0 ATPase MipZ MeaB PF03308.16 gi|156937992|ref|YP_001435788.1| - 0.09 11.7 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Auto_anti-p27 PF06677.12 gi|156937993|ref|YP_001435789.1| - 2e-12 47.1 0.2 2.9e-12 46.5 0.2 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DNA_ligase_ZBD PF03119.16 gi|156937993|ref|YP_001435789.1| - 0.0029 17.6 0.2 0.0082 16.1 0.2 1.8 1 0 0 1 1 1 1 NAD-dependent DNA ligase C4 zinc finger domain FYDLN_acid PF09538.10 gi|156937993|ref|YP_001435789.1| - 0.028 15.1 0.0 0.038 14.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (FYDLN_acid) zf-ribbon_3 PF13248.6 gi|156937993|ref|YP_001435789.1| - 0.036 13.5 1.4 0.11 12.0 1.4 1.7 1 1 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|156937993|ref|YP_001435789.1| - 0.043 13.3 0.1 0.069 12.7 0.1 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|156937993|ref|YP_001435789.1| - 0.11 12.5 0.1 0.29 11.1 0.0 1.7 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Isochorismatase PF00857.20 gi|156937994|ref|YP_001435790.1| - 4.4e-52 176.8 0.0 4.9e-52 176.6 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family GHMP_kinases_N PF00288.26 gi|156937995|ref|YP_001435791.1| - 3.4e-14 52.8 3.9 3.4e-14 52.8 3.9 1.9 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|156937995|ref|YP_001435791.1| - 0.00011 22.4 1.7 0.00015 22.0 0.1 2.0 2 0 0 2 2 2 1 GHMP kinases C terminal DUF373 PF04123.13 gi|156937996|ref|YP_001435792.1| - 2.6e-79 267.1 9.6 3.2e-79 266.8 9.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF373) TMEM43 PF07787.12 gi|156937996|ref|YP_001435792.1| - 0.79 9.1 2.5 1.5 8.2 2.5 1.4 1 0 0 1 1 1 0 Transmembrane protein 43 EzrA PF06160.12 gi|156937997|ref|YP_001435793.1| - 5.4e-07 28.2 41.3 0.00017 19.9 18.2 2.0 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA ATG16 PF08614.11 gi|156937997|ref|YP_001435793.1| - 8e-07 29.5 47.3 0.00022 21.5 21.5 2.4 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) Spc7 PF08317.11 gi|156937997|ref|YP_001435793.1| - 4.3e-06 25.8 51.6 0.00024 20.1 23.5 3.2 1 1 1 2 2 2 2 Spc7 kinetochore protein NPV_P10 PF05531.12 gi|156937997|ref|YP_001435793.1| - 8.4e-05 23.0 1.0 8.4e-05 23.0 1.0 4.2 2 2 1 3 3 3 1 Nucleopolyhedrovirus P10 protein T3SSipB PF16535.5 gi|156937997|ref|YP_001435793.1| - 9.3e-05 22.9 17.1 0.00019 22.0 2.8 2.7 1 1 0 2 2 2 1 Type III cell invasion protein SipB Seryl_tRNA_N PF02403.22 gi|156937997|ref|YP_001435793.1| - 0.00025 21.2 51.2 0.00076 19.7 11.1 4.2 1 1 3 4 4 4 3 Seryl-tRNA synthetase N-terminal domain Occludin_ELL PF07303.13 gi|156937997|ref|YP_001435793.1| - 0.00027 21.6 28.9 0.0093 16.7 3.0 4.4 2 2 1 3 3 3 1 Occludin homology domain DUF1664 PF07889.12 gi|156937997|ref|YP_001435793.1| - 0.00029 20.8 15.8 0.0021 18.1 4.5 4.2 1 1 4 5 5 5 2 Protein of unknown function (DUF1664) DUF3584 PF12128.8 gi|156937997|ref|YP_001435793.1| - 0.0006 17.5 37.9 0.021 12.3 5.9 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF3584) AAA_13 PF13166.6 gi|156937997|ref|YP_001435793.1| - 0.00061 18.6 16.4 0.00061 18.6 16.4 2.1 1 1 1 2 2 2 1 AAA domain Atg14 PF10186.9 gi|156937997|ref|YP_001435793.1| - 0.00074 18.7 47.8 0.0059 15.7 8.7 3.1 1 1 2 3 3 3 2 Vacuolar sorting 38 and autophagy-related subunit 14 Laminin_II PF06009.12 gi|156937997|ref|YP_001435793.1| - 0.00078 19.5 7.0 0.00078 19.5 7.0 3.5 1 1 2 3 3 3 1 Laminin Domain II TPR_MLP1_2 PF07926.12 gi|156937997|ref|YP_001435793.1| - 0.00087 19.4 46.8 0.016 15.2 12.2 4.3 1 1 3 4 4 4 1 TPR/MLP1/MLP2-like protein Lebercilin PF15619.6 gi|156937997|ref|YP_001435793.1| - 0.0012 18.5 19.4 0.0012 18.5 19.4 2.7 1 1 1 2 2 2 1 Ciliary protein causing Leber congenital amaurosis disease DUF3450 PF11932.8 gi|156937997|ref|YP_001435793.1| - 0.0026 17.1 33.2 0.083 12.2 4.0 2.8 1 1 1 2 2 2 2 Protein of unknown function (DUF3450) HsbA PF12296.8 gi|156937997|ref|YP_001435793.1| - 0.0031 17.9 0.2 6 7.3 0.0 3.9 1 1 2 3 3 2 0 Hydrophobic surface binding protein A APG6_N PF17675.1 gi|156937997|ref|YP_001435793.1| - 0.0033 18.0 60.9 0.047 14.2 9.8 3.9 1 1 2 3 3 3 2 Apg6 coiled-coil region MCPsignal PF00015.21 gi|156937997|ref|YP_001435793.1| - 0.0072 16.2 10.6 0.011 15.5 1.1 2.7 1 1 0 2 2 2 1 Methyl-accepting chemotaxis protein (MCP) signalling domain DUF4763 PF15960.5 gi|156937997|ref|YP_001435793.1| - 0.0081 15.5 35.7 0.27 10.5 15.4 2.6 1 1 0 2 2 2 2 Domain of unknown function (DUF4763) Snapin_Pallidin PF14712.6 gi|156937997|ref|YP_001435793.1| - 0.0092 16.4 36.5 4.5 7.8 4.9 5.1 2 2 0 3 3 3 0 Snapin/Pallidin LXG PF04740.12 gi|156937997|ref|YP_001435793.1| - 0.014 15.1 18.8 0.078 12.7 2.3 3.7 2 2 2 4 4 4 0 LXG domain of WXG superfamily DUF948 PF06103.11 gi|156937997|ref|YP_001435793.1| - 0.014 15.6 13.3 1.2 9.5 2.5 4.2 2 2 1 3 3 3 0 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 gi|156937997|ref|YP_001435793.1| - 0.014 15.7 1.6 0.014 15.7 1.6 5.8 3 2 3 6 6 6 0 Flagella accessory protein C (FlaC) DUF4407 PF14362.6 gi|156937997|ref|YP_001435793.1| - 0.015 14.7 28.2 0.38 10.1 8.4 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) Baculo_PEP_C PF04513.12 gi|156937997|ref|YP_001435793.1| - 0.015 15.3 13.5 0.15 12.1 0.5 3.5 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DASH_Dad2 PF08654.10 gi|156937997|ref|YP_001435793.1| - 0.017 15.5 5.2 0.017 15.5 5.2 3.9 1 1 1 3 3 2 0 DASH complex subunit Dad2 NAPRTase_C PF17956.1 gi|156937997|ref|YP_001435793.1| - 0.018 15.4 3.5 0.018 15.4 3.5 3.0 2 1 1 3 3 2 0 Nicotinate phosphoribosyltransferase C-terminal domain DUF211 PF02680.14 gi|156937997|ref|YP_001435793.1| - 0.019 15.1 1.7 0.05 13.8 0.1 2.4 2 1 1 3 3 2 0 Uncharacterized ArCR, COG1888 ZapB PF06005.12 gi|156937997|ref|YP_001435793.1| - 0.021 15.3 4.5 0.021 15.3 4.5 5.1 2 1 2 4 4 2 0 Cell division protein ZapB Laminin_I PF06008.14 gi|156937997|ref|YP_001435793.1| - 0.022 14.5 32.0 0.049 13.3 13.5 2.3 2 0 0 2 2 2 0 Laminin Domain I Sec34 PF04136.15 gi|156937997|ref|YP_001435793.1| - 0.028 14.3 0.5 0.028 14.3 0.5 3.9 2 2 3 5 5 5 0 Sec34-like family Taxilin PF09728.9 gi|156937997|ref|YP_001435793.1| - 0.042 13.0 43.3 0.35 10.0 42.3 2.4 1 1 0 1 1 1 0 Myosin-like coiled-coil protein DUF4686 PF15742.5 gi|156937997|ref|YP_001435793.1| - 0.046 12.9 45.2 0.083 12.0 45.2 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4686) LPP PF04728.13 gi|156937997|ref|YP_001435793.1| - 0.05 14.0 17.1 2.1 8.8 0.2 5.1 2 2 3 5 5 5 0 Lipoprotein leucine-zipper CENP-F_leu_zip PF10473.9 gi|156937997|ref|YP_001435793.1| - 0.057 13.4 54.3 0.63 10.1 7.6 3.6 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IFT57 PF10498.9 gi|156937997|ref|YP_001435793.1| - 0.058 12.4 35.0 0.28 10.1 14.1 2.6 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 FUSC PF04632.12 gi|156937997|ref|YP_001435793.1| - 0.067 11.7 15.2 1.5 7.2 14.3 2.1 1 1 1 2 2 2 0 Fusaric acid resistance protein family Golgin_A5 PF09787.9 gi|156937997|ref|YP_001435793.1| - 0.07 12.6 41.8 0.77 9.2 12.4 2.3 1 1 1 2 2 2 0 Golgin subfamily A member 5 YlqD PF11068.8 gi|156937997|ref|YP_001435793.1| - 0.1 12.9 33.9 0.25 11.7 4.1 3.7 2 1 0 3 3 3 0 YlqD protein PspA_IM30 PF04012.12 gi|156937997|ref|YP_001435793.1| - 0.12 11.9 43.9 0.81 9.2 6.8 4.3 1 1 0 2 2 2 0 PspA/IM30 family DUF4201 PF13870.6 gi|156937997|ref|YP_001435793.1| - 0.12 12.0 47.9 0.28 10.9 19.8 3.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4201) zf-C4H2 PF10146.9 gi|156937997|ref|YP_001435793.1| - 0.12 12.6 42.1 0.075 13.3 18.9 2.6 1 1 1 2 2 2 0 Zinc finger-containing protein MtrB PF05440.12 gi|156937997|ref|YP_001435793.1| - 0.14 12.6 3.3 32 5.0 0.1 4.1 3 1 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase subunit B TACC_C PF05010.14 gi|156937997|ref|YP_001435793.1| - 0.14 11.9 39.6 1.1 9.0 9.2 2.6 1 1 1 2 2 2 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal DUF724 PF05266.14 gi|156937997|ref|YP_001435793.1| - 0.14 12.0 39.8 1.8 8.4 9.3 3.7 1 1 3 4 4 4 0 Protein of unknown function (DUF724) STAT_alpha PF01017.20 gi|156937997|ref|YP_001435793.1| - 0.22 11.4 28.9 0.38 10.6 3.9 3.2 2 1 1 3 3 3 0 STAT protein, all-alpha domain Dor1 PF04124.12 gi|156937997|ref|YP_001435793.1| - 0.25 10.0 27.5 9.3 4.8 20.2 2.7 1 1 2 3 3 3 0 Dor1-like family MscS_porin PF12795.7 gi|156937997|ref|YP_001435793.1| - 0.26 10.8 41.2 0.045 13.3 2.9 3.9 1 1 1 3 3 2 0 Mechanosensitive ion channel porin domain XhlA PF10779.9 gi|156937997|ref|YP_001435793.1| - 0.29 11.4 44.1 0.054 13.7 3.0 5.3 3 1 3 6 6 6 0 Haemolysin XhlA HIP1_clath_bdg PF16515.5 gi|156937997|ref|YP_001435793.1| - 0.29 11.8 41.4 0.68 10.6 16.2 3.7 2 1 2 4 4 4 0 Clathrin-binding domain of Huntingtin-interacting protein 1 TMPIT PF07851.13 gi|156937997|ref|YP_001435793.1| - 0.3 10.3 28.4 0.18 11.0 6.2 3.2 1 1 2 3 3 3 0 TMPIT-like protein LOH1CR12 PF10158.9 gi|156937997|ref|YP_001435793.1| - 0.34 10.9 16.0 0.22 11.5 2.2 3.2 2 1 1 3 3 3 0 Tumour suppressor protein Surfac_D-trimer PF09006.11 gi|156937997|ref|YP_001435793.1| - 0.35 10.8 2.3 11 6.0 0.0 3.5 4 0 0 4 4 3 0 Lung surfactant protein D coiled-coil trimerisation BLOC1_2 PF10046.9 gi|156937997|ref|YP_001435793.1| - 0.36 11.1 31.8 2.8 8.3 4.6 4.8 2 2 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Fez1 PF06818.15 gi|156937997|ref|YP_001435793.1| - 0.38 11.2 42.7 0.11 13.0 12.4 2.8 1 1 1 2 2 2 0 Fez1 HAP1_N PF04849.13 gi|156937997|ref|YP_001435793.1| - 0.45 9.7 51.2 0.91 8.7 24.6 2.5 1 1 1 2 2 2 0 HAP1 N-terminal conserved region MAD PF05557.13 gi|156937997|ref|YP_001435793.1| - 0.48 8.7 47.4 0.0045 15.4 21.2 2.3 1 1 1 2 2 2 0 Mitotic checkpoint protein Jnk-SapK_ap_N PF09744.9 gi|156937997|ref|YP_001435793.1| - 0.67 10.2 53.1 5.1 7.3 6.2 3.6 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 Med10 PF09748.9 gi|156937997|ref|YP_001435793.1| - 0.72 9.8 9.9 1.2 9.1 0.9 4.2 1 1 2 3 3 3 0 Transcription factor subunit Med10 of Mediator complex DUF4618 PF15397.6 gi|156937997|ref|YP_001435793.1| - 0.79 9.1 34.9 1.2 8.5 0.3 4.1 1 1 2 4 4 4 0 Domain of unknown function (DUF4618) HOOK PF05622.12 gi|156937997|ref|YP_001435793.1| - 0.81 7.8 47.2 0.12 10.5 22.2 2.3 1 1 0 2 2 2 0 HOOK protein YabA PF06156.13 gi|156937997|ref|YP_001435793.1| - 0.86 10.3 38.8 1.3 9.7 5.7 4.3 1 1 2 4 4 4 0 Initiation control protein YabA Mod_r PF07200.13 gi|156937997|ref|YP_001435793.1| - 0.99 9.5 38.3 0.55 10.3 13.4 3.5 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein DUF5082 PF16888.5 gi|156937997|ref|YP_001435793.1| - 1 9.6 45.0 0.88 9.9 10.0 5.2 2 2 2 4 4 4 0 Domain of unknown function (DUF5082) HSBP1 PF06825.12 gi|156937997|ref|YP_001435793.1| - 1.3 9.0 7.1 3.9 7.4 0.5 3.9 3 1 0 3 3 2 0 Heat shock factor binding protein 1 DUF2730 PF10805.8 gi|156937997|ref|YP_001435793.1| - 1.3 9.2 25.2 0.1 12.7 1.9 4.5 2 2 1 4 4 4 0 Protein of unknown function (DUF2730) THOC7 PF05615.13 gi|156937997|ref|YP_001435793.1| - 1.7 8.9 49.5 0.032 14.5 9.1 4.6 2 2 2 4 4 4 0 Tho complex subunit 7 HMMR_N PF15905.5 gi|156937997|ref|YP_001435793.1| - 1.7 8.0 50.1 16 4.9 22.6 2.5 1 1 1 2 2 2 0 Hyaluronan mediated motility receptor N-terminal TraF_2 PF13729.6 gi|156937997|ref|YP_001435793.1| - 1.7 7.9 7.9 1.3 8.4 0.6 3.0 1 1 3 4 4 4 0 F plasmid transfer operon, TraF, protein Phage_GPO PF05929.11 gi|156937997|ref|YP_001435793.1| - 1.8 8.1 21.1 3.1 7.3 7.9 2.6 1 1 1 2 2 2 0 Phage capsid scaffolding protein (GPO) serine peptidase DUF812 PF05667.11 gi|156937997|ref|YP_001435793.1| - 1.9 7.3 49.5 0.12 11.2 10.1 3.7 1 1 1 3 3 3 0 Protein of unknown function (DUF812) AKNA PF12443.8 gi|156937997|ref|YP_001435793.1| - 1.9 9.2 15.6 1.3 9.7 0.4 4.3 1 1 4 6 6 4 0 AT-hook-containing transcription factor Prominin PF05478.11 gi|156937997|ref|YP_001435793.1| - 2.1 6.2 20.9 4.6 5.1 20.0 1.9 1 1 0 1 1 1 0 Prominin CENP-H PF05837.12 gi|156937997|ref|YP_001435793.1| - 3 8.3 51.5 0.65 10.4 3.7 4.8 1 1 4 5 5 5 0 Centromere protein H (CENP-H) GAS PF13851.6 gi|156937997|ref|YP_001435793.1| - 3 7.1 56.0 1.3 8.3 21.7 3.5 1 1 3 4 4 4 0 Growth-arrest specific micro-tubule binding FlgN PF05130.12 gi|156937997|ref|YP_001435793.1| - 3.1 8.3 43.4 0.29 11.6 17.6 3.6 1 1 2 3 3 3 0 FlgN protein KxDL PF10241.9 gi|156937997|ref|YP_001435793.1| - 3.2 8.1 26.1 1 9.7 1.0 4.3 2 2 1 3 3 3 0 Uncharacterized conserved protein ADIP PF11559.8 gi|156937997|ref|YP_001435793.1| - 3.3 7.8 43.1 1.3 9.1 4.0 3.6 1 1 2 3 3 3 0 Afadin- and alpha -actinin-Binding Sigma70_ECF PF07638.11 gi|156937997|ref|YP_001435793.1| - 3.6 7.4 22.9 11 5.9 0.1 3.4 3 1 0 3 3 2 0 ECF sigma factor Filament PF00038.21 gi|156937997|ref|YP_001435793.1| - 3.8 7.0 48.3 4.8e+02 0.1 48.3 3.2 1 1 0 1 1 1 0 Intermediate filament protein Allexi_40kDa PF05549.11 gi|156937997|ref|YP_001435793.1| - 3.9 6.9 15.9 0.57 9.7 2.3 3.0 1 1 1 2 2 2 0 Allexivirus 40kDa protein Syntaxin PF00804.25 gi|156937997|ref|YP_001435793.1| - 4 7.1 37.3 5 6.7 8.5 3.9 1 1 2 3 3 3 0 Syntaxin Fib_alpha PF08702.10 gi|156937997|ref|YP_001435793.1| - 4 7.6 30.6 0.3 11.3 11.4 3.2 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 gi|156937997|ref|YP_001435793.1| - 4.3 6.8 30.6 0.23 11.0 11.6 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit HAUS-augmin3 PF14932.6 gi|156937997|ref|YP_001435793.1| - 4.6 6.8 41.1 0.33 10.5 16.6 3.0 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Bacillus_HBL PF05791.11 gi|156937997|ref|YP_001435793.1| - 4.9 6.9 22.1 0.67 9.7 2.9 3.8 2 2 2 4 4 4 0 Bacillus haemolytic enterotoxin (HBL) FliT PF05400.13 gi|156937997|ref|YP_001435793.1| - 5.2 8.0 47.5 0.39 11.6 10.3 4.9 3 2 1 4 4 3 0 Flagellar protein FliT HrpB7 PF09486.10 gi|156937997|ref|YP_001435793.1| - 5.7 7.3 34.5 31 4.9 12.6 4.3 1 1 3 4 4 3 0 Bacterial type III secretion protein (HrpB7) YscO PF07321.12 gi|156937997|ref|YP_001435793.1| - 6.3 6.7 53.7 0.87 9.5 20.4 3.2 2 1 1 3 3 3 0 Type III secretion protein YscO KASH_CCD PF14662.6 gi|156937997|ref|YP_001435793.1| - 7 6.4 49.3 9.9 5.9 16.8 3.5 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH FapA PF03961.13 gi|156937997|ref|YP_001435793.1| - 8.7 4.8 47.6 1.3 7.5 15.8 3.2 1 1 2 3 3 3 0 Flagellar Assembly Protein A PI3K_P85_iSH2 PF16454.5 gi|156937997|ref|YP_001435793.1| - 9.1 5.8 39.4 4.1 7.0 12.6 3.4 1 1 2 3 3 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain ATP_bind_1 PF03029.17 gi|156937998|ref|YP_001435794.1| - 1.4e-52 178.9 0.0 1.6e-52 178.7 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein PduV-EutP PF10662.9 gi|156937998|ref|YP_001435794.1| - 2e-06 27.6 0.1 1.1 9.1 0.0 3.9 2 1 1 3 3 3 3 Ethanolamine utilisation - propanediol utilisation SRP54 PF00448.22 gi|156937998|ref|YP_001435794.1| - 0.00012 21.8 0.0 0.39 10.3 0.0 2.2 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain GTP_EFTU PF00009.27 gi|156937998|ref|YP_001435794.1| - 0.00038 20.1 0.0 0.0022 17.5 0.0 2.1 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 gi|156937998|ref|YP_001435794.1| - 0.0034 16.8 0.0 0.042 13.2 0.0 2.1 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 gi|156937998|ref|YP_001435794.1| - 0.0047 17.0 0.0 0.21 11.6 0.0 2.4 2 1 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 gi|156937998|ref|YP_001435794.1| - 0.0048 17.2 0.0 0.0092 16.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|156937998|ref|YP_001435794.1| - 0.014 15.3 0.0 14 5.6 0.0 3.3 3 1 0 3 3 3 0 RsgA GTPase AAA_18 PF13238.6 gi|156937998|ref|YP_001435794.1| - 0.029 14.9 0.0 0.051 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|156937998|ref|YP_001435794.1| - 0.058 13.1 0.0 0.097 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 gi|156937998|ref|YP_001435794.1| - 0.066 13.0 0.0 5.9 6.6 0.0 2.3 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_16 PF13191.6 gi|156937998|ref|YP_001435794.1| - 0.07 13.5 0.0 0.13 12.6 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 gi|156937998|ref|YP_001435794.1| - 0.13 12.6 0.0 0.66 10.4 0.0 2.0 2 0 0 2 2 2 0 RNA helicase AAA_28 PF13521.6 gi|156937998|ref|YP_001435794.1| - 0.17 12.1 0.2 0.78 10.0 0.2 2.0 1 1 0 1 1 1 0 AAA domain TrwB_AAD_bind PF10412.9 gi|156937998|ref|YP_001435794.1| - 0.21 10.4 0.0 0.39 9.6 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain CBS PF00571.28 gi|156937999|ref|YP_001435795.1| - 4.3e-23 81.5 11.4 1.4e-11 44.7 0.1 3.9 4 0 0 4 4 4 3 CBS domain AsnC_trans_reg PF01037.21 gi|156937999|ref|YP_001435795.1| - 0.0019 18.1 0.0 0.0035 17.3 0.0 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain GerE PF00196.19 gi|156937999|ref|YP_001435795.1| - 0.0035 16.9 0.0 0.01 15.3 0.0 1.8 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family XdhC_CoxI PF02625.16 gi|156937999|ref|YP_001435795.1| - 0.075 13.2 0.3 18 5.6 0.0 2.5 2 0 0 2 2 2 0 XdhC and CoxI family CREPT PF16566.5 gi|156938000|ref|YP_001435796.1| - 0.0014 18.8 0.4 0.013 15.7 0.2 2.2 2 0 0 2 2 2 1 Cell-cycle alteration and expression-elevated protein in tumour Fib_alpha PF08702.10 gi|156938000|ref|YP_001435796.1| - 0.015 15.5 1.1 0.21 11.7 0.2 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Fzo_mitofusin PF04799.13 gi|156938000|ref|YP_001435796.1| - 0.037 13.6 1.7 5.8 6.4 0.0 2.0 2 0 0 2 2 2 0 fzo-like conserved region DUF4214 PF13946.6 gi|156938000|ref|YP_001435796.1| - 0.038 14.0 0.2 0.092 12.8 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4214) DUF5052 PF16475.5 gi|156938000|ref|YP_001435796.1| - 0.042 13.5 0.1 1.2 8.8 0.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5052) CdvA PF18822.1 gi|156938000|ref|YP_001435796.1| - 0.052 13.4 6.2 1.2 8.9 2.2 2.2 2 0 0 2 2 2 0 CdvA-like coiled-coil domain ArsR PF09824.9 gi|156938000|ref|YP_001435796.1| - 0.065 12.8 1.0 0.18 11.4 0.3 1.9 2 0 0 2 2 2 0 ArsR transcriptional regulator YliH PF10799.8 gi|156938000|ref|YP_001435796.1| - 0.067 13.1 0.0 0.085 12.8 0.0 1.1 1 0 0 1 1 1 0 Biofilm formation protein (YliH/bssR) BLOC1_2 PF10046.9 gi|156938000|ref|YP_001435796.1| - 0.12 12.6 4.2 0.98 9.8 0.1 2.3 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF2508 PF10704.9 gi|156938000|ref|YP_001435796.1| - 0.17 12.1 4.6 1.4 9.2 2.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2508) DUF641 PF04859.12 gi|156938000|ref|YP_001435796.1| - 0.18 12.1 2.6 5.7 7.3 1.5 2.1 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) Mei4 PF13971.6 gi|156938000|ref|YP_001435796.1| - 0.29 10.6 2.8 0.37 10.3 2.6 1.2 1 1 0 1 1 1 0 Meiosis-specific protein Mei4 TPR_MLP1_2 PF07926.12 gi|156938000|ref|YP_001435796.1| - 0.29 11.2 6.3 1.1 9.3 1.7 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein XLF PF09302.11 gi|156938000|ref|YP_001435796.1| - 0.39 10.9 2.7 0.22 11.7 0.6 1.7 2 0 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component TFA2_Winged_2 PF18121.1 gi|156938000|ref|YP_001435796.1| - 0.58 9.9 4.3 1.3 8.7 2.2 2.1 2 0 0 2 2 2 0 TFA2 Winged helix domain 2 Cep57_CLD_2 PF14197.6 gi|156938000|ref|YP_001435796.1| - 1.3 9.1 7.7 5.6 7.1 1.3 2.8 2 1 1 3 3 3 0 Centrosome localisation domain of PPC89 Tup_N PF08581.10 gi|156938000|ref|YP_001435796.1| - 1.8 8.9 8.6 23 5.4 4.6 2.6 2 1 0 2 2 2 0 Tup N-terminal Cas_Csn2 PF09711.10 gi|156938000|ref|YP_001435796.1| - 2.3 7.8 10.8 0.64 9.7 4.4 2.0 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_Csn2) vATP-synt_AC39 PF01992.16 gi|156938001|ref|YP_001435797.1| - 1.5e-39 136.5 0.0 1.7e-39 136.3 0.0 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit VbhA PF18495.1 gi|156938001|ref|YP_001435797.1| - 0.19 11.6 0.7 0.47 10.4 0.7 1.7 1 0 0 1 1 1 0 Antitoxin VbhA V-ATPase_G_2 PF16999.5 gi|156938002|ref|YP_001435798.1| - 8.8e-06 26.1 15.0 0.00014 22.2 15.0 2.0 1 1 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit YusW PF14039.6 gi|156938002|ref|YP_001435798.1| - 0.00011 22.7 3.1 0.00011 22.7 3.1 1.6 2 0 0 2 2 1 1 YusW-like protein Apolipoprotein PF01442.18 gi|156938002|ref|YP_001435798.1| - 0.0002 21.3 15.2 0.00036 20.5 15.2 1.4 1 1 0 1 1 1 1 Apolipoprotein A1/A4/E domain STAT_alpha PF01017.20 gi|156938002|ref|YP_001435798.1| - 0.00072 19.5 5.2 0.00086 19.2 5.2 1.1 1 0 0 1 1 1 1 STAT protein, all-alpha domain DUF948 PF06103.11 gi|156938002|ref|YP_001435798.1| - 0.0021 18.3 0.9 0.0076 16.5 0.3 2.0 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF948) Phage_min_cap2 PF06152.11 gi|156938002|ref|YP_001435798.1| - 0.0023 16.9 2.5 0.0024 16.8 2.5 1.0 1 0 0 1 1 1 1 Phage minor capsid protein 2 ApoLp-III PF07464.11 gi|156938002|ref|YP_001435798.1| - 0.0081 16.3 9.1 0.018 15.1 9.1 1.6 1 1 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) GvpL_GvpF PF06386.11 gi|156938002|ref|YP_001435798.1| - 0.011 15.6 9.7 0.013 15.4 9.7 1.0 1 0 0 1 1 1 0 Gas vesicle synthesis protein GvpL/GvpF Taxilin PF09728.9 gi|156938002|ref|YP_001435798.1| - 0.012 14.8 12.9 0.016 14.4 12.9 1.1 1 0 0 1 1 1 0 Myosin-like coiled-coil protein Baculo_PEP_C PF04513.12 gi|156938002|ref|YP_001435798.1| - 0.02 14.9 2.9 0.62 10.1 0.8 2.2 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus TelA PF05816.11 gi|156938002|ref|YP_001435798.1| - 0.02 13.9 8.6 0.024 13.7 8.6 1.0 1 0 0 1 1 1 0 Toxic anion resistance protein (TelA) Pex19 PF04614.12 gi|156938002|ref|YP_001435798.1| - 0.024 14.4 7.8 0.03 14.1 7.8 1.1 1 0 0 1 1 1 0 Pex19 protein family DUF4709 PF15821.5 gi|156938002|ref|YP_001435798.1| - 0.03 14.6 7.1 0.16 12.2 3.6 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4709) DUF883 PF05957.13 gi|156938002|ref|YP_001435798.1| - 0.031 14.9 12.2 1.7 9.3 7.0 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) ImcF-related_N PF14331.6 gi|156938002|ref|YP_001435798.1| - 0.035 13.5 4.0 0.042 13.2 3.7 1.4 1 1 0 1 1 1 0 ImcF-related N-terminal domain BAR_3 PF16746.5 gi|156938002|ref|YP_001435798.1| - 0.039 13.6 6.1 0.051 13.3 6.1 1.2 1 0 0 1 1 1 0 BAR domain of APPL family Mitofilin PF09731.9 gi|156938002|ref|YP_001435798.1| - 0.048 12.5 17.4 0.059 12.2 17.4 1.1 1 0 0 1 1 1 0 Mitochondrial inner membrane protein PIN_8 PF18476.1 gi|156938002|ref|YP_001435798.1| - 0.052 13.4 5.4 0.086 12.7 5.4 1.3 1 0 0 1 1 1 0 PIN like domain ATP-synt_B PF00430.18 gi|156938002|ref|YP_001435798.1| - 0.058 13.5 14.0 0.045 13.8 12.3 1.6 1 1 1 2 2 2 0 ATP synthase B/B' CF(0) Cep57_MT_bd PF06657.13 gi|156938002|ref|YP_001435798.1| - 0.063 13.7 12.5 0.087 13.3 7.3 2.4 1 1 1 2 2 2 0 Centrosome microtubule-binding domain of Cep57 V-ATPase_G PF03179.15 gi|156938002|ref|YP_001435798.1| - 0.073 13.6 13.1 0.11 13.1 13.1 1.4 1 1 0 1 1 1 0 Vacuolar (H+)-ATPase G subunit Cas_DxTHG PF09455.10 gi|156938002|ref|YP_001435798.1| - 0.074 12.6 6.3 0.095 12.3 6.3 1.1 1 0 0 1 1 1 0 CRISPR-associated (Cas) DxTHG family DUF3510 PF12022.8 gi|156938002|ref|YP_001435798.1| - 0.076 13.4 1.3 0.09 13.2 1.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3510) LPP PF04728.13 gi|156938002|ref|YP_001435798.1| - 0.082 13.3 4.5 6.5 7.2 1.8 2.7 2 1 1 3 3 2 0 Lipoprotein leucine-zipper PaaX_C PF08223.11 gi|156938002|ref|YP_001435798.1| - 0.084 13.1 4.5 0.74 10.1 0.1 2.2 1 1 1 2 2 2 0 PaaX-like protein C-terminal domain BLOC1_2 PF10046.9 gi|156938002|ref|YP_001435798.1| - 0.096 13.0 12.0 1 9.7 0.5 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Alb1 PF09135.11 gi|156938002|ref|YP_001435798.1| - 0.1 13.5 5.3 0.14 13.0 5.3 1.2 1 0 0 1 1 1 0 Alb1 Exonuc_VII_L PF02601.15 gi|156938002|ref|YP_001435798.1| - 0.11 12.1 6.2 0.12 11.9 6.2 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF5129 PF17173.4 gi|156938002|ref|YP_001435798.1| - 0.11 11.6 4.3 0.12 11.5 2.7 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF5129) LUC7 PF03194.15 gi|156938002|ref|YP_001435798.1| - 0.13 11.9 11.8 0.42 10.2 1.0 2.0 1 1 1 2 2 2 0 LUC7 N_terminus DUF2218 PF09981.9 gi|156938002|ref|YP_001435798.1| - 0.13 12.6 1.1 5.3 7.5 0.4 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2218) Fungal_trans_2 PF11951.8 gi|156938002|ref|YP_001435798.1| - 0.14 10.9 1.7 0.1 11.4 0.6 1.4 2 0 0 2 2 1 0 Fungal specific transcription factor domain Tweety PF04906.13 gi|156938002|ref|YP_001435798.1| - 0.14 10.8 0.8 0.17 10.5 0.8 1.3 1 0 0 1 1 1 0 Tweety CorA PF01544.18 gi|156938002|ref|YP_001435798.1| - 0.15 11.3 4.0 0.18 11.1 4.0 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein ECH_1 PF00378.20 gi|156938002|ref|YP_001435798.1| - 0.15 11.3 3.6 0.21 10.8 3.1 1.4 1 1 0 1 1 1 0 Enoyl-CoA hydratase/isomerase Phasin PF05597.11 gi|156938002|ref|YP_001435798.1| - 0.16 12.0 8.7 0.35 10.9 8.0 1.7 1 1 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) UvrD_C PF13361.6 gi|156938002|ref|YP_001435798.1| - 0.18 11.1 5.1 0.2 11.0 5.1 1.0 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain RRP7 PF12923.7 gi|156938002|ref|YP_001435798.1| - 0.2 11.8 8.7 0.27 11.4 8.7 1.1 1 0 0 1 1 1 0 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain SpmSyn_N PF17950.1 gi|156938002|ref|YP_001435798.1| - 0.2 11.9 4.5 0.31 11.3 0.1 2.5 1 1 2 3 3 2 0 S-adenosylmethionine decarboxylase N -terminal Fib_alpha PF08702.10 gi|156938002|ref|YP_001435798.1| - 0.23 11.7 5.6 1.1 9.5 5.6 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family DUF1525 PF07511.11 gi|156938002|ref|YP_001435798.1| - 0.23 11.6 4.4 0.31 11.2 2.8 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1525) AAA_13 PF13166.6 gi|156938002|ref|YP_001435798.1| - 0.23 10.0 8.2 0.3 9.7 8.2 1.1 1 0 0 1 1 1 0 AAA domain 7TMR-HDED PF07697.11 gi|156938002|ref|YP_001435798.1| - 0.24 11.5 6.5 0.32 11.1 6.5 1.1 1 0 0 1 1 1 0 7TM-HD extracellular ZYG-11_interact PF05884.12 gi|156938002|ref|YP_001435798.1| - 0.25 10.7 1.5 0.34 10.3 1.3 1.3 1 1 0 1 1 1 0 Interactor of ZYG-11 Vps16_N PF04841.13 gi|156938002|ref|YP_001435798.1| - 0.26 10.0 2.2 0.29 9.8 2.2 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region Drf_FH3 PF06367.16 gi|156938002|ref|YP_001435798.1| - 0.28 10.8 9.3 0.1 12.2 3.4 2.0 1 1 0 2 2 2 0 Diaphanous FH3 Domain GldM_N PF12081.8 gi|156938002|ref|YP_001435798.1| - 0.28 11.3 9.5 1.9 8.6 0.4 2.0 1 1 1 2 2 2 0 GldM N-terminal domain DUF445 PF04286.12 gi|156938002|ref|YP_001435798.1| - 0.29 10.9 5.8 0.39 10.5 5.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) RHD3 PF05879.12 gi|156938002|ref|YP_001435798.1| - 0.32 9.1 7.4 0.35 8.9 7.4 1.0 1 0 0 1 1 1 0 Root hair defective 3 GTP-binding protein (RHD3) RmuC PF02646.16 gi|156938002|ref|YP_001435798.1| - 0.32 10.1 10.0 0.21 10.7 0.9 2.1 1 1 1 2 2 2 0 RmuC family BshC PF10079.9 gi|156938002|ref|YP_001435798.1| - 0.36 9.5 8.9 0.47 9.1 8.9 1.2 1 0 0 1 1 1 0 Bacillithiol biosynthesis BshC AAA_32 PF13654.6 gi|156938002|ref|YP_001435798.1| - 0.36 9.6 11.8 0.75 8.5 3.1 1.9 1 1 1 2 2 2 0 AAA domain Carbpep_Y_N PF05388.11 gi|156938002|ref|YP_001435798.1| - 0.4 11.2 3.3 0.6 10.7 1.8 1.8 1 1 1 2 2 2 0 Carboxypeptidase Y pro-peptide Cor1 PF04803.12 gi|156938002|ref|YP_001435798.1| - 0.46 10.7 11.6 0.25 11.6 0.9 2.3 1 1 1 2 2 2 0 Cor1/Xlr/Xmr conserved region Leptin PF02024.15 gi|156938002|ref|YP_001435798.1| - 0.46 10.2 2.4 0.51 10.1 0.7 1.7 2 0 0 2 2 2 0 Leptin TMPIT PF07851.13 gi|156938002|ref|YP_001435798.1| - 0.47 9.6 8.6 1.3 8.2 8.6 1.7 1 1 0 1 1 1 0 TMPIT-like protein FAM184 PF15665.5 gi|156938002|ref|YP_001435798.1| - 0.49 10.1 16.5 0.79 9.5 16.5 1.3 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B YtxH PF12732.7 gi|156938002|ref|YP_001435798.1| - 0.58 10.7 11.4 6.5 7.4 6.4 2.4 1 1 1 2 2 2 0 YtxH-like protein CdvA PF18822.1 gi|156938002|ref|YP_001435798.1| - 0.6 9.9 15.2 0.57 10.0 1.3 2.5 1 1 1 2 2 2 0 CdvA-like coiled-coil domain HSCB_C PF07743.13 gi|156938002|ref|YP_001435798.1| - 0.61 10.6 17.6 2.5 8.6 4.6 2.9 1 1 1 2 2 2 0 HSCB C-terminal oligomerisation domain DUF4407 PF14362.6 gi|156938002|ref|YP_001435798.1| - 0.63 9.3 8.3 0.83 8.9 8.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) FUSC PF04632.12 gi|156938002|ref|YP_001435798.1| - 0.64 8.5 2.6 0.7 8.4 2.6 1.0 1 0 0 1 1 1 0 Fusaric acid resistance protein family DNA_primase_lrg PF04104.14 gi|156938002|ref|YP_001435798.1| - 0.7 9.3 5.1 1.1 8.6 4.8 1.5 1 1 0 1 1 1 0 Eukaryotic and archaeal DNA primase, large subunit Prominin PF05478.11 gi|156938002|ref|YP_001435798.1| - 0.77 7.6 4.6 0.91 7.4 4.6 1.2 1 0 0 1 1 1 0 Prominin DUF2570 PF10828.8 gi|156938002|ref|YP_001435798.1| - 0.87 9.4 9.9 0.16 11.8 4.7 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF2570) ING PF12998.7 gi|156938002|ref|YP_001435798.1| - 1 10.0 7.6 3.9 8.1 3.0 2.1 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding COG2 PF06148.11 gi|156938002|ref|YP_001435798.1| - 1.1 9.4 9.7 5.7 7.0 4.2 2.3 1 1 2 3 3 3 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF4618 PF15397.6 gi|156938002|ref|YP_001435798.1| - 1.1 8.6 13.0 3.5 7.0 13.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) T2SSF PF00482.23 gi|156938002|ref|YP_001435798.1| - 1.2 9.1 5.1 0.68 9.9 1.0 2.0 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein F FapA PF03961.13 gi|156938002|ref|YP_001435798.1| - 1.3 7.6 10.6 1.7 7.2 10.6 1.3 1 1 0 1 1 1 0 Flagellar Assembly Protein A Ku_C PF03730.14 gi|156938002|ref|YP_001435798.1| - 1.5 9.6 8.4 2.9 8.6 0.4 2.3 1 1 1 2 2 2 0 Ku70/Ku80 C-terminal arm TipAS PF07739.13 gi|156938002|ref|YP_001435798.1| - 1.5 9.4 8.2 2.2 8.8 6.2 2.0 1 1 1 2 2 2 0 TipAS antibiotic-recognition domain RRF PF01765.19 gi|156938002|ref|YP_001435798.1| - 1.5 8.8 10.7 1.1 9.2 6.2 1.9 1 1 1 2 2 2 0 Ribosome recycling factor OmpH PF03938.14 gi|156938002|ref|YP_001435798.1| - 1.5 9.2 18.1 4.7 7.5 18.1 1.7 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) SICA_alpha PF12887.7 gi|156938002|ref|YP_001435798.1| - 1.5 8.6 8.8 7.9 6.3 7.5 2.4 1 1 2 3 3 3 0 SICA extracellular alpha domain Atg14 PF10186.9 gi|156938002|ref|YP_001435798.1| - 1.9 7.5 7.9 2.4 7.2 7.9 1.2 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 HSP70 PF00012.20 gi|156938002|ref|YP_001435798.1| - 2 6.5 7.7 2.5 6.2 7.7 1.2 1 0 0 1 1 1 0 Hsp70 protein EAP30 PF04157.16 gi|156938002|ref|YP_001435798.1| - 2.5 7.3 10.2 1.3 8.2 0.3 2.1 1 1 1 2 2 2 0 EAP30/Vps36 family ZnuA PF01297.17 gi|156938002|ref|YP_001435798.1| - 2.6 7.4 8.3 7 6.0 0.2 2.6 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic PRKCSH-like PF12999.7 gi|156938002|ref|YP_001435798.1| - 2.7 7.7 6.4 2.7 7.8 1.9 1.9 1 1 1 2 2 2 0 Glucosidase II beta subunit-like SAM_Exu PF18609.1 gi|156938002|ref|YP_001435798.1| - 3.4 7.8 8.5 2.9 8.0 1.2 2.9 1 1 2 3 3 3 0 Exuperantia SAM-like domain CdiI_2 PF18593.1 gi|156938002|ref|YP_001435798.1| - 3.4 8.4 7.2 1.5 9.5 0.5 2.7 1 1 1 2 2 2 0 CdiI immunity protein CLZ PF16526.5 gi|156938002|ref|YP_001435798.1| - 3.8 7.9 14.5 2.1 8.8 0.4 2.6 2 1 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels POTRA_TamA_1 PF17243.2 gi|156938002|ref|YP_001435798.1| - 4.1 7.6 6.7 6.8 6.9 2.5 2.1 2 0 0 2 2 2 0 POTRA domain TamA domain 1 DUF2203 PF09969.9 gi|156938002|ref|YP_001435798.1| - 4.1 8.1 9.5 1.2e+02 3.4 9.5 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) CemA PF03040.14 gi|156938002|ref|YP_001435798.1| - 4.2 7.2 8.3 7.8 6.4 8.2 1.6 1 1 0 1 1 1 0 CemA family Frataxin_Cyay PF01491.16 gi|156938002|ref|YP_001435798.1| - 4.5 7.4 7.6 6.1 7.0 0.3 2.9 1 1 2 3 3 3 0 Frataxin-like domain YlqD PF11068.8 gi|156938002|ref|YP_001435798.1| - 5.6 7.3 11.0 5.4 7.4 4.9 2.0 1 1 1 2 2 2 0 YlqD protein ACCA PF03255.14 gi|156938002|ref|YP_001435798.1| - 6.1 6.7 8.4 76 3.2 8.1 2.0 1 1 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FlaC_arch PF05377.11 gi|156938002|ref|YP_001435798.1| - 6.2 7.3 8.3 3.3 8.2 0.6 2.9 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) MCM_N PF14551.6 gi|156938002|ref|YP_001435798.1| - 6.9 7.3 7.5 44 4.7 7.5 2.0 1 1 0 1 1 1 0 MCM N-terminal domain KfrA_N PF11740.8 gi|156938002|ref|YP_001435798.1| - 7.3 7.3 13.1 28 5.4 13.1 1.9 1 1 0 1 1 1 0 Plasmid replication region DNA-binding N-term DUF190 PF02641.15 gi|156938004|ref|YP_001435800.1| - 2.6e-22 79.0 0.1 3e-22 78.8 0.1 1.0 1 0 0 1 1 1 1 Uncharacterized ACR, COG1993 DUF2179 PF10035.9 gi|156938004|ref|YP_001435800.1| - 6.9e-05 22.5 0.1 0.00013 21.7 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2179) RTT107_BRCT_6 PF16771.5 gi|156938004|ref|YP_001435800.1| - 0.035 14.3 0.1 0.047 13.8 0.1 1.2 1 1 0 1 1 1 0 Regulator of Ty1 transposition protein 107 BRCT domain ABC_tran PF00005.27 gi|156938006|ref|YP_001435802.1| - 1.4e-25 90.4 0.0 1.8e-25 90.0 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|156938006|ref|YP_001435802.1| - 4.7e-09 36.0 0.0 0.00011 21.7 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|156938006|ref|YP_001435802.1| - 2.6e-08 34.0 0.0 0.0067 16.3 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 gi|156938006|ref|YP_001435802.1| - 0.00013 21.7 0.1 0.00035 20.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 gi|156938006|ref|YP_001435802.1| - 0.00032 20.9 0.0 0.00054 20.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|156938006|ref|YP_001435802.1| - 0.0012 18.5 0.1 0.0023 17.6 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|156938006|ref|YP_001435802.1| - 0.0093 16.4 0.1 0.82 10.1 0.1 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|156938006|ref|YP_001435802.1| - 0.012 15.5 0.0 0.017 15.0 0.0 1.2 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|156938006|ref|YP_001435802.1| - 0.014 14.1 0.1 1.8 7.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|156938006|ref|YP_001435802.1| - 0.016 14.8 0.0 0.027 14.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|156938006|ref|YP_001435802.1| - 0.035 14.5 0.1 0.077 13.4 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|156938006|ref|YP_001435802.1| - 0.038 14.5 0.1 0.066 13.7 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|156938006|ref|YP_001435802.1| - 0.047 13.9 0.0 0.072 13.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain KdpD PF02702.17 gi|156938006|ref|YP_001435802.1| - 0.066 12.7 0.0 0.1 12.1 0.0 1.2 1 0 0 1 1 1 0 Osmosensitive K+ channel His kinase sensor domain AAA_5 PF07728.14 gi|156938006|ref|YP_001435802.1| - 0.17 11.9 0.1 0.42 10.6 0.1 1.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Cytidylate_kin PF02224.18 gi|156938006|ref|YP_001435802.1| - 0.23 11.2 0.1 0.35 10.6 0.1 1.3 1 0 0 1 1 1 0 Cytidylate kinase AAA_15 PF13175.6 gi|156938006|ref|YP_001435802.1| - 0.24 11.1 0.0 0.54 9.9 0.0 1.5 2 0 0 2 2 2 0 AAA ATPase domain UPF0051 PF01458.17 gi|156938007|ref|YP_001435803.1| - 2e-55 187.9 0.0 2.5e-55 187.6 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) Molydop_binding PF01568.21 gi|156938008|ref|YP_001435804.1| - 4.8e-05 23.4 0.4 0.075 13.1 0.0 2.2 1 1 1 2 2 2 2 Molydopterin dinucleotide binding domain DUF4165 PF13752.6 gi|156938008|ref|YP_001435804.1| - 0.054 13.5 0.0 0.066 13.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4165) Voltage_CLC PF00654.20 gi|156938009|ref|YP_001435805.1| - 6.4e-42 144.1 35.3 8.8e-41 140.3 27.9 2.1 1 1 1 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|156938009|ref|YP_001435805.1| - 7e-16 58.4 3.0 1e-07 32.3 0.1 2.5 2 0 0 2 2 2 2 CBS domain ATPase_gene1 PF09527.10 gi|156938009|ref|YP_001435805.1| - 0.025 14.7 2.4 0.025 14.7 2.4 3.7 2 0 0 2 2 2 0 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter DUF1847 PF08901.11 gi|156938009|ref|YP_001435805.1| - 0.064 12.9 0.1 0.15 11.7 0.1 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF1847) PSI_PsaF PF02507.15 gi|156938009|ref|YP_001435805.1| - 0.079 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Photosystem I reaction centre subunit III Proteasome PF00227.26 gi|156938010|ref|YP_001435806.1| - 0.089 12.3 0.5 0.096 12.2 0.5 1.0 1 0 0 1 1 1 0 Proteasome subunit Y_phosphatase PF00102.27 gi|156938012|ref|YP_001435808.1| - 0.0049 16.5 0.0 0.0061 16.2 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase tRNA_synthFbeta PF17759.1 gi|156938013|ref|YP_001435809.1| - 2.7e-33 115.2 0.0 5.1e-33 114.3 0.0 1.4 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|156938013|ref|YP_001435809.1| - 5.1e-11 42.7 0.1 3.3e-07 30.5 0.1 3.5 3 0 0 3 3 3 2 tRNA synthetase B5 domain B3_4 PF03483.17 gi|156938013|ref|YP_001435809.1| - 1.4e-08 34.6 0.0 2.3e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 gi|156938013|ref|YP_001435809.1| - 0.021 15.0 0.0 0.083 13.1 0.0 2.2 1 1 0 1 1 1 0 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|156938014|ref|YP_001435810.1| - 5.6e-79 265.1 0.0 7.1e-79 264.7 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2 PF00152.20 gi|156938014|ref|YP_001435810.1| - 9.4e-06 24.9 0.2 0.12 11.5 0.1 2.4 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 gi|156938014|ref|YP_001435810.1| - 2e-05 24.1 0.0 0.00098 18.6 0.0 2.3 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain HTH_20 PF12840.7 gi|156938014|ref|YP_001435810.1| - 0.0057 16.7 3.5 0.017 15.1 0.4 3.2 2 1 1 3 3 3 1 Helix-turn-helix domain TrmB PF01978.19 gi|156938014|ref|YP_001435810.1| - 0.0083 16.0 2.7 0.022 14.6 0.8 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB Sulfolobus_pRN PF05584.11 gi|156938014|ref|YP_001435810.1| - 0.052 13.6 1.8 0.075 13.1 0.2 2.1 2 0 0 2 2 2 0 Sulfolobus plasmid regulatory protein MarR_2 PF12802.7 gi|156938014|ref|YP_001435810.1| - 0.076 12.9 0.1 0.25 11.3 0.1 1.9 1 0 0 1 1 1 0 MarR family DUF374 PF04028.13 gi|156938014|ref|YP_001435810.1| - 0.12 12.0 0.0 0.26 10.9 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF374) PadR PF03551.14 gi|156938014|ref|YP_001435810.1| - 0.13 12.3 0.7 1.7 8.7 0.2 2.6 2 0 0 2 2 2 0 Transcriptional regulator PadR-like family HTH_36 PF13730.6 gi|156938014|ref|YP_001435810.1| - 0.14 12.2 0.0 0.3 11.1 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|156938014|ref|YP_001435810.1| - 0.32 11.2 2.6 2.1 8.5 0.5 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Gln-synt_C PF00120.24 gi|156938015|ref|YP_001435811.1| - 1.8e-126 421.8 0.0 2.3e-126 421.5 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|156938015|ref|YP_001435811.1| - 1.3e-22 79.3 0.0 2.7e-22 78.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain FeoA PF04023.14 gi|156938016|ref|YP_001435812.1| - 1.8e-19 69.7 0.4 2e-19 69.6 0.4 1.0 1 0 0 1 1 1 1 FeoA domain Phage_holin_3_6 PF07332.11 gi|156938017|ref|YP_001435813.1| - 1.3e-05 25.1 0.4 1.8e-05 24.7 0.4 1.2 1 0 0 1 1 1 1 Putative Actinobacterial Holin-X, holin superfamily III His_Phos_1 PF00300.22 gi|156938018|ref|YP_001435814.1| - 1.1e-12 48.1 0.0 1.3e-12 47.9 0.0 1.2 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) Baculo_PEP_C PF04513.12 gi|156938020|ref|YP_001435816.1| - 0.012 15.6 0.8 0.017 15.2 0.8 1.2 1 0 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Drf_FH3 PF06367.16 gi|156938020|ref|YP_001435816.1| - 0.027 14.1 0.8 0.26 10.9 0.1 2.0 2 0 0 2 2 2 0 Diaphanous FH3 Domain Flavin_Reduct PF01613.18 gi|156938022|ref|YP_001435818.1| - 1.2e-22 80.6 0.0 1.6e-22 80.2 0.0 1.1 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|156938022|ref|YP_001435818.1| - 0.22 11.3 0.0 0.3 10.8 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF447) Aldolase_II PF00596.21 gi|156938023|ref|YP_001435819.1| - 1.1e-33 116.7 0.0 1.3e-33 116.5 0.0 1.0 1 0 0 1 1 1 1 Class II Aldolase and Adducin N-terminal domain CxxCxxCC PF03692.15 gi|156938024|ref|YP_001435820.1| - 1.3e-07 32.2 0.1 1.7e-07 31.8 0.1 1.2 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain DUF3109 PF11307.8 gi|156938024|ref|YP_001435820.1| - 0.0031 17.3 0.1 0.0037 17.1 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3109) MCR_D PF02505.14 gi|156938024|ref|YP_001435820.1| - 0.17 11.7 0.0 0.19 11.6 0.0 1.1 1 0 0 1 1 1 0 Methyl-coenzyme M reductase operon protein D Fer4 PF00037.27 gi|156938025|ref|YP_001435821.1| - 5e-09 35.6 1.8 5e-09 35.6 1.8 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156938025|ref|YP_001435821.1| - 3.7e-08 33.8 3.1 1.6e-05 25.4 0.1 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156938025|ref|YP_001435821.1| - 5.4e-07 29.4 1.4 5.4e-07 29.4 1.4 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156938025|ref|YP_001435821.1| - 8.4e-07 29.0 7.1 1.2e-06 28.5 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156938025|ref|YP_001435821.1| - 4.9e-06 26.6 17.9 0.00068 19.7 10.0 1.9 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156938025|ref|YP_001435821.1| - 6.4e-06 25.9 2.3 6.4e-06 25.9 2.3 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_15 PF13459.6 gi|156938025|ref|YP_001435821.1| - 0.00015 22.4 0.5 0.00015 22.4 0.5 2.0 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|156938025|ref|YP_001435821.1| - 0.00019 21.5 5.7 0.00038 20.5 0.6 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156938025|ref|YP_001435821.1| - 0.00079 20.3 10.6 0.021 15.8 1.6 2.1 1 1 3 4 4 4 2 4Fe-4S double cluster binding domain Fer4_3 PF12798.7 gi|156938025|ref|YP_001435821.1| - 0.0012 19.6 3.5 0.0012 19.6 3.5 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156938025|ref|YP_001435821.1| - 0.0028 18.0 10.9 0.0063 16.9 2.5 2.2 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_13 PF13370.6 gi|156938025|ref|YP_001435821.1| - 0.02 15.4 1.3 0.02 15.4 1.3 2.1 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|156938025|ref|YP_001435821.1| - 0.026 15.1 11.5 0.15 12.6 2.1 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156938025|ref|YP_001435821.1| - 0.052 14.0 10.4 0.33 11.4 1.8 2.1 1 1 3 4 4 3 0 4Fe-4S dicluster domain Stig1 PF04885.13 gi|156938025|ref|YP_001435821.1| - 0.57 10.7 6.1 0.74 10.3 6.1 1.1 1 0 0 1 1 1 0 Stigma-specific protein, Stig1 Fer4_22 PF17179.4 gi|156938025|ref|YP_001435821.1| - 1 10.2 8.7 1.2 10.0 1.1 2.1 2 0 0 2 2 2 0 4Fe-4S dicluster domain DUF3079 PF11278.8 gi|156938025|ref|YP_001435821.1| - 2.4 8.1 7.6 2 8.3 3.3 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3079) UPF0180 PF03698.13 gi|156938026|ref|YP_001435822.1| - 0.0036 17.4 0.0 0.0081 16.3 0.0 1.6 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0180) V4R PF02830.18 gi|156938026|ref|YP_001435822.1| - 0.045 13.8 0.2 0.13 12.3 0.1 1.8 1 1 1 2 2 2 0 V4R domain UCH PF00443.29 gi|156938027|ref|YP_001435823.1| - 0.0055 16.2 0.1 0.0062 16.0 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase DUF3106 PF11304.8 gi|156938027|ref|YP_001435823.1| - 0.19 12.2 0.0 0.34 11.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3106) Uteroglobin PF01099.17 gi|156938027|ref|YP_001435823.1| - 6.5 7.2 7.7 9.3 6.7 0.1 3.1 4 0 0 4 4 4 0 Uteroglobin family MetOD1 PF18546.1 gi|156938030|ref|YP_001435826.1| - 1.4e-07 31.6 0.5 7e-05 22.8 0.5 2.9 1 1 0 1 1 1 1 Metanogen output domain 1 ATC_hydrolase PF14196.6 gi|156938030|ref|YP_001435826.1| - 1e-05 26.3 3.9 4.2e-05 24.3 3.9 2.0 1 1 0 1 1 1 1 L-2-amino-thiazoline-4-carboxylic acid hydrolase T2SSE PF00437.20 gi|156938032|ref|YP_001435828.1| - 6.7e-11 41.8 0.2 1.3e-10 40.8 0.0 1.6 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_18 PF13238.6 gi|156938032|ref|YP_001435828.1| - 6.7e-05 23.4 0.2 0.001 19.6 0.0 2.8 3 0 0 3 3 2 1 AAA domain Zeta_toxin PF06414.12 gi|156938032|ref|YP_001435828.1| - 0.0004 19.7 0.0 0.00093 18.5 0.0 1.6 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 gi|156938032|ref|YP_001435828.1| - 0.00077 19.9 0.0 0.0023 18.4 0.0 1.7 2 0 0 2 2 1 1 AAA ATPase domain PIN_9 PF18477.1 gi|156938032|ref|YP_001435828.1| - 0.00091 19.5 0.5 0.0032 17.8 0.5 1.9 1 0 0 1 1 1 1 PIN like domain IstB_IS21 PF01695.17 gi|156938032|ref|YP_001435828.1| - 0.0021 17.8 0.0 0.0038 17.0 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein MeaB PF03308.16 gi|156938032|ref|YP_001435828.1| - 0.0025 16.8 0.0 0.0057 15.7 0.0 1.5 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|156938032|ref|YP_001435828.1| - 0.0033 17.0 0.0 0.0079 15.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|156938032|ref|YP_001435828.1| - 0.0044 16.7 0.1 0.017 14.8 0.0 1.9 1 1 1 2 2 2 1 Thymidylate kinase AAA_28 PF13521.6 gi|156938032|ref|YP_001435828.1| - 0.0046 17.2 0.1 0.014 15.7 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_30 PF13604.6 gi|156938032|ref|YP_001435828.1| - 0.0058 16.4 1.9 0.015 15.1 0.0 2.3 2 1 1 3 3 3 1 AAA domain KTI12 PF08433.10 gi|156938032|ref|YP_001435828.1| - 0.0072 15.8 0.0 0.012 15.1 0.0 1.3 1 0 0 1 1 1 1 Chromatin associated protein KTI12 ATP_bind_1 PF03029.17 gi|156938032|ref|YP_001435828.1| - 0.0076 16.1 0.1 0.016 15.0 0.1 1.5 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_14 PF13173.6 gi|156938032|ref|YP_001435828.1| - 0.0092 16.0 0.0 0.034 14.2 0.0 1.9 2 0 0 2 2 1 1 AAA domain TsaE PF02367.17 gi|156938032|ref|YP_001435828.1| - 0.01 15.9 0.0 0.028 14.4 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PRK PF00485.18 gi|156938032|ref|YP_001435828.1| - 0.016 14.9 0.0 0.034 13.9 0.0 1.5 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family ResIII PF04851.15 gi|156938032|ref|YP_001435828.1| - 0.02 14.9 0.0 0.038 14.0 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit ABC_tran PF00005.27 gi|156938032|ref|YP_001435828.1| - 0.021 15.3 0.0 0.069 13.7 0.0 1.9 2 0 0 2 2 1 0 ABC transporter RuvB_N PF05496.12 gi|156938032|ref|YP_001435828.1| - 0.023 14.4 0.1 0.27 11.0 0.0 2.4 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|156938032|ref|YP_001435828.1| - 0.027 14.6 0.0 0.087 13.0 0.0 1.9 2 0 0 2 2 1 0 AAA domain AAA_22 PF13401.6 gi|156938032|ref|YP_001435828.1| - 0.028 14.7 0.0 0.078 13.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 gi|156938032|ref|YP_001435828.1| - 0.035 13.8 0.0 0.097 12.4 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain DnaB_C PF03796.15 gi|156938032|ref|YP_001435828.1| - 0.035 13.4 0.1 0.14 11.5 0.0 1.9 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain MMR_HSR1 PF01926.23 gi|156938032|ref|YP_001435828.1| - 0.037 14.1 0.0 0.12 12.5 0.0 1.9 1 0 0 1 1 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|156938032|ref|YP_001435828.1| - 0.042 13.8 1.5 0.16 11.9 0.1 2.7 3 0 0 3 3 2 0 NTPase NACHT PF05729.12 gi|156938032|ref|YP_001435828.1| - 0.044 13.7 0.1 0.11 12.3 0.0 1.7 2 0 0 2 2 2 0 NACHT domain FtsK_SpoIIIE PF01580.18 gi|156938032|ref|YP_001435828.1| - 0.048 13.0 0.0 0.16 11.3 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA PF00004.29 gi|156938032|ref|YP_001435828.1| - 0.049 14.1 0.3 0.19 12.1 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|156938032|ref|YP_001435828.1| - 0.057 13.4 0.1 0.29 11.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) ATPase PF06745.13 gi|156938032|ref|YP_001435828.1| - 0.057 12.7 0.1 0.18 11.1 0.0 1.8 2 0 0 2 2 2 0 KaiC AAA_24 PF13479.6 gi|156938032|ref|YP_001435828.1| - 0.059 13.1 0.3 0.19 11.4 0.1 1.9 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|156938032|ref|YP_001435828.1| - 0.061 12.9 0.0 0.12 12.0 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 gi|156938032|ref|YP_001435828.1| - 0.095 13.0 0.2 0.39 11.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain Ploopntkinase3 PF18751.1 gi|156938032|ref|YP_001435828.1| - 0.1 12.5 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 AAA_29 PF13555.6 gi|156938032|ref|YP_001435828.1| - 0.11 12.2 0.0 0.58 9.9 0.0 2.1 2 0 0 2 2 1 0 P-loop containing region of AAA domain DUF815 PF05673.13 gi|156938032|ref|YP_001435828.1| - 0.14 11.3 0.1 0.35 10.0 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF815) RNA_helicase PF00910.22 gi|156938032|ref|YP_001435828.1| - 0.18 12.2 0.0 0.4 11.1 0.0 1.7 1 1 0 1 1 1 0 RNA helicase Amidohydro_3 PF07969.11 gi|156938033|ref|YP_001435829.1| - 5e-33 115.3 0.0 6.9e-33 114.8 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_1 PF01979.20 gi|156938033|ref|YP_001435829.1| - 0.0047 16.3 0.0 0.27 10.5 0.0 2.3 2 1 0 2 2 2 2 Amidohydrolase family Radical_SAM PF04055.21 gi|156938033|ref|YP_001435829.1| - 0.029 14.7 0.1 0.14 12.5 0.1 2.0 2 0 0 2 2 2 0 Radical SAM superfamily ADH_N PF08240.12 gi|156938034|ref|YP_001435830.1| - 7.9e-06 25.7 0.1 0.028 14.3 0.0 2.5 1 1 1 2 2 2 2 Alcohol dehydrogenase GroES-like domain ADH_N_2 PF16884.5 gi|156938034|ref|YP_001435830.1| - 0.081 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 N-terminal domain of oxidoreductase Aconitase_C PF00694.19 gi|156938035|ref|YP_001435831.1| - 4e-20 72.5 0.0 5.6e-20 72.0 0.0 1.3 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|156938035|ref|YP_001435831.1| - 0.0039 16.8 0.1 0.13 11.9 0.1 2.1 1 1 0 1 1 1 1 Aconitate hydratase 2 N-terminus Neurokinin_B PF03823.14 gi|156938035|ref|YP_001435831.1| - 0.031 14.3 0.0 0.071 13.2 0.0 1.6 1 0 0 1 1 1 0 Neurokinin B HMGL-like PF00682.19 gi|156938036|ref|YP_001435832.1| - 8.1e-72 241.9 5.6 1.2e-71 241.4 5.6 1.2 1 0 0 1 1 1 1 HMGL-like AsnC_trans_reg PF01037.21 gi|156938036|ref|YP_001435832.1| - 7.5e-15 54.7 0.1 2.6e-14 53.0 0.1 2.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain AP_endonuc_2 PF01261.24 gi|156938036|ref|YP_001435832.1| - 0.013 15.0 1.7 0.11 11.9 1.1 2.5 2 1 1 3 3 3 0 Xylose isomerase-like TIM barrel GYD PF08734.11 gi|156938036|ref|YP_001435832.1| - 0.018 15.0 0.0 0.22 11.5 0.0 2.7 2 0 0 2 2 2 0 GYD domain FtsK_SpoIIIE PF01580.18 gi|156938036|ref|YP_001435832.1| - 0.034 13.5 0.3 0.057 12.8 0.3 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family NapD PF03927.13 gi|156938036|ref|YP_001435832.1| - 0.039 14.0 0.0 0.16 12.0 0.0 2.0 1 0 0 1 1 1 0 NapD protein CinA_KH PF18146.1 gi|156938036|ref|YP_001435832.1| - 0.12 12.5 0.9 2.1 8.5 0.1 2.8 1 1 1 2 2 2 0 Damage-inducible protein CinA KH domain SurA_N_2 PF13623.6 gi|156938036|ref|YP_001435832.1| - 0.13 12.1 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 SurA N-terminal domain DUF3077 PF11275.8 gi|156938037|ref|YP_001435833.1| - 0.13 12.5 0.1 24 5.2 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3077) Lig_C PF18330.1 gi|156938038|ref|YP_001435834.1| - 9.8e-27 93.4 0.0 1.5e-26 92.8 0.0 1.3 1 0 0 1 1 1 1 Ligase Pab1020 C-terminal region RNA_ligase PF09414.10 gi|156938038|ref|YP_001435834.1| - 1.3e-15 58.1 0.0 2e-15 57.4 0.0 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_A_M PF01068.21 gi|156938038|ref|YP_001435834.1| - 1.4e-05 24.8 0.0 0.00049 19.8 0.0 2.2 1 1 0 1 1 1 1 ATP dependent DNA ligase domain Chlor_dismutase PF06778.12 gi|156938038|ref|YP_001435834.1| - 0.012 15.2 0.0 0.02 14.5 0.0 1.3 1 0 0 1 1 1 0 Chlorite dismutase RraB PF06877.11 gi|156938038|ref|YP_001435834.1| - 0.035 14.8 0.0 0.067 13.9 0.0 1.4 1 0 0 1 1 1 0 Regulator of ribonuclease activity B AIRS_C PF02769.22 gi|156938039|ref|YP_001435835.1| - 9.3e-45 152.6 1.7 4e-25 88.8 0.0 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|156938039|ref|YP_001435835.1| - 1.6e-44 150.5 0.3 6.5e-24 84.4 0.2 2.6 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain FGAR-AT_linker PF18072.1 gi|156938039|ref|YP_001435835.1| - 2.2e-12 47.3 0.3 4.1e-12 46.4 0.3 1.5 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain Histidinol_dh PF00815.20 gi|156938039|ref|YP_001435835.1| - 0.074 12.1 0.1 0.11 11.4 0.1 1.2 1 0 0 1 1 1 0 Histidinol dehydrogenase TatD_DNase PF01026.21 gi|156938040|ref|YP_001435836.1| - 2.1e-19 69.9 0.0 2.6e-19 69.6 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase MIX PF18529.1 gi|156938040|ref|YP_001435836.1| - 0.095 12.4 0.1 0.16 11.7 0.1 1.3 1 0 0 1 1 1 0 Mitochondrial membrane-anchored proteins Lactamase_B_3 PF13483.6 gi|156938041|ref|YP_001435837.1| - 1.9e-24 86.4 0.3 3.6e-24 85.5 0.3 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|156938041|ref|YP_001435837.1| - 2.9e-17 62.9 0.2 4.8e-17 62.1 0.2 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|156938041|ref|YP_001435837.1| - 1.9e-09 37.8 3.9 3e-09 37.2 3.9 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Inhibitor_I78 PF11720.8 gi|156938041|ref|YP_001435837.1| - 0.058 13.5 0.0 1.3 9.1 0.0 2.4 2 0 0 2 2 2 0 Peptidase inhibitor I78 family Lactamase_B_6 PF16661.5 gi|156938041|ref|YP_001435837.1| - 0.069 12.6 0.0 0.097 12.1 0.0 1.2 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain POR PF01558.18 gi|156938043|ref|YP_001435839.1| - 1.8e-44 151.9 0.3 2.1e-44 151.7 0.3 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase DUF2525 PF10733.9 gi|156938043|ref|YP_001435839.1| - 0.33 11.3 1.1 7.4 6.9 0.3 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF2525) Fer4 PF00037.27 gi|156938044|ref|YP_001435840.1| - 4.8e-14 51.5 16.8 1.3e-07 31.2 4.5 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156938044|ref|YP_001435840.1| - 2.8e-12 46.6 17.7 2.4e-09 37.2 9.2 1.5 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156938044|ref|YP_001435840.1| - 8.5e-09 35.9 9.6 2e-08 34.7 9.8 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156938044|ref|YP_001435840.1| - 9e-09 35.3 9.5 1.2e-08 34.9 9.5 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156938044|ref|YP_001435840.1| - 1.2e-08 35.0 16.9 3.7e-06 27.0 10.4 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156938044|ref|YP_001435840.1| - 3.4e-08 33.2 14.8 0.00054 19.9 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|156938044|ref|YP_001435840.1| - 5.5e-08 33.6 8.1 0.0012 19.8 1.9 2.2 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|156938044|ref|YP_001435840.1| - 1e-06 28.5 11.5 0.00069 19.6 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156938044|ref|YP_001435840.1| - 0.00011 22.4 12.7 0.058 13.9 3.1 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|156938044|ref|YP_001435840.1| - 0.0037 17.8 12.3 0.06 13.9 2.0 2.7 2 1 1 3 3 3 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_17 PF13534.6 gi|156938044|ref|YP_001435840.1| - 0.0057 17.2 12.1 0.57 10.8 3.2 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156938044|ref|YP_001435840.1| - 0.0079 16.6 11.7 0.42 11.1 3.8 2.1 1 1 0 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|156938044|ref|YP_001435840.1| - 0.011 15.9 2.6 0.011 15.9 2.6 1.7 1 1 1 2 2 2 0 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_22 PF17179.4 gi|156938044|ref|YP_001435840.1| - 0.042 14.7 9.0 0.35 11.8 2.2 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156938044|ref|YP_001435840.1| - 0.049 14.4 10.3 0.82 10.5 2.7 2.9 2 1 1 3 3 3 0 4Fe-4S single cluster domain Fer4_3 PF12798.7 gi|156938044|ref|YP_001435840.1| - 5.4 8.2 15.3 3.3 8.8 5.6 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain POR_N PF01855.19 gi|156938045|ref|YP_001435841.1| - 2e-67 227.4 1.6 3e-67 226.7 1.6 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|156938045|ref|YP_001435841.1| - 6.2e-27 93.9 0.2 1.1e-26 93.1 0.2 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|156938045|ref|YP_001435841.1| - 6.4e-05 22.6 4.6 0.00052 19.7 2.2 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|156938045|ref|YP_001435841.1| - 0.00046 20.1 0.1 0.003 17.4 0.0 2.3 1 1 1 2 2 2 1 Transketolase, C-terminal domain TPP_enzyme_C PF02775.21 gi|156938046|ref|YP_001435842.1| - 5.8e-26 91.1 0.2 9.1e-26 90.5 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TruD PF01142.18 gi|156938047|ref|YP_001435843.1| - 1.5e-49 168.9 0.0 5.5e-41 140.8 0.0 2.1 2 0 0 2 2 2 2 tRNA pseudouridine synthase D (TruD) KOW PF00467.29 gi|156938048|ref|YP_001435844.1| - 4.6e-05 23.2 1.5 0.0001 22.1 1.5 1.6 1 0 0 1 1 1 1 KOW motif Ribosomal_L14e PF01929.17 gi|156938048|ref|YP_001435844.1| - 0.082 13.4 0.0 0.11 13.0 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L14 Peptidase_M50 PF02163.22 gi|156938049|ref|YP_001435845.1| - 3.1e-19 69.2 2.1 5.3e-17 61.9 2.1 2.6 1 1 0 1 1 1 1 Peptidase family M50 PDZ_6 PF17820.1 gi|156938049|ref|YP_001435845.1| - 6.5e-13 48.3 1.6 1.1e-12 47.5 0.3 2.2 2 0 0 2 2 2 1 PDZ domain PDZ_2 PF13180.6 gi|156938049|ref|YP_001435845.1| - 1.1e-12 48.0 0.5 3.8e-12 46.4 0.5 1.9 1 1 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|156938049|ref|YP_001435845.1| - 2.5e-10 40.6 0.5 5.1e-10 39.6 0.4 1.6 1 1 0 1 1 1 1 PDZ domain PDZ_1 PF12812.7 gi|156938049|ref|YP_001435845.1| - 0.0045 17.0 0.0 0.0091 16.0 0.0 1.4 1 0 0 1 1 1 1 PDZ-like domain Tricorn_PDZ PF14685.6 gi|156938049|ref|YP_001435845.1| - 0.0046 16.9 0.1 0.0098 15.8 0.1 1.6 1 1 0 1 1 1 1 Tricorn protease PDZ domain GRASP55_65 PF04495.14 gi|156938049|ref|YP_001435845.1| - 0.0067 16.7 0.4 0.014 15.7 0.0 1.7 2 0 0 2 2 2 1 GRASP55/65 PDZ-like domain MTABC_N PF16185.5 gi|156938049|ref|YP_001435845.1| - 0.03 13.8 0.6 0.055 13.0 0.6 1.4 1 0 0 1 1 1 0 Mitochondrial ABC-transporter N-terminal five TM region DUF4083 PF13314.6 gi|156938049|ref|YP_001435845.1| - 0.11 12.4 0.2 0.11 12.4 0.2 2.9 4 0 0 4 4 4 0 Domain of unknown function (DUF4083) Ldh_1_N PF00056.23 gi|156938050|ref|YP_001435846.1| - 1.3e-31 109.5 2.3 2.1e-31 108.9 2.3 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 gi|156938050|ref|YP_001435846.1| - 2.1e-12 47.3 0.0 3.8e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|156938050|ref|YP_001435846.1| - 6.1e-05 22.7 2.3 0.00026 20.6 2.3 2.2 1 1 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DUF4147 PF13660.6 gi|156938050|ref|YP_001435846.1| - 0.0035 16.9 0.3 0.0091 15.6 0.0 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4147) GFO_IDH_MocA PF01408.22 gi|156938050|ref|YP_001435846.1| - 0.011 16.5 0.2 0.028 15.3 0.2 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold Glyco_hydro_4 PF02056.16 gi|156938050|ref|YP_001435846.1| - 0.034 13.7 0.0 0.12 11.9 0.0 2.0 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase EKR PF10371.9 gi|156938050|ref|YP_001435846.1| - 0.074 12.9 0.2 5.2 6.9 0.0 3.2 2 1 1 3 3 3 0 Domain of unknown function Aldolase_II PF00596.21 gi|156938050|ref|YP_001435846.1| - 0.12 12.3 0.1 6.4 6.7 0.0 2.3 2 0 0 2 2 2 0 Class II Aldolase and Adducin N-terminal domain 3HCDH_N PF02737.18 gi|156938050|ref|YP_001435846.1| - 3.6 7.4 5.6 0.58 10.0 0.5 2.4 4 0 0 4 4 4 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RNase_P_p30 PF01876.16 gi|156938051|ref|YP_001435847.1| - 0.00032 20.2 0.0 0.00052 19.5 0.0 1.3 1 0 0 1 1 1 1 RNase P subunit p30 Methyltrans_SAM PF10672.9 gi|156938052|ref|YP_001435848.1| - 7e-18 64.8 0.0 8.7e-18 64.5 0.0 1.1 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase Cons_hypoth95 PF03602.15 gi|156938052|ref|YP_001435848.1| - 5.6e-13 48.9 0.0 1.3e-12 47.7 0.0 1.5 1 1 1 2 2 2 1 Conserved hypothetical protein 95 Met_10 PF02475.16 gi|156938052|ref|YP_001435848.1| - 4.4e-11 42.9 0.0 1.2e-10 41.5 0.0 1.6 2 0 0 2 2 2 1 Met-10+ like-protein PrmA PF06325.13 gi|156938052|ref|YP_001435848.1| - 0.0018 17.7 0.0 0.003 17.0 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) TRM PF02005.16 gi|156938052|ref|YP_001435848.1| - 0.0028 16.9 0.0 0.0034 16.6 0.0 1.2 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Adeno_E4_34 PF04528.13 gi|156938052|ref|YP_001435848.1| - 0.012 15.4 0.0 0.87 9.4 0.0 2.3 2 0 0 2 2 2 0 Adenovirus early E4 34 kDa protein conserved region MTS PF05175.14 gi|156938052|ref|YP_001435848.1| - 0.019 14.6 0.0 0.032 13.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|156938052|ref|YP_001435848.1| - 0.1 13.3 0.0 0.38 11.5 0.0 2.0 3 0 0 3 3 3 0 Methyltransferase domain DNA_methylase PF00145.17 gi|156938052|ref|YP_001435848.1| - 0.1 11.9 0.0 0.14 11.5 0.0 1.2 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase MscS_TM PF12794.7 gi|156938053|ref|YP_001435849.1| - 0.02 13.8 0.3 0.023 13.5 0.3 1.0 1 0 0 1 1 1 0 Mechanosensitive ion channel inner membrane domain 1 GspL_C PF12693.7 gi|156938053|ref|YP_001435849.1| - 0.1 12.5 0.0 0.13 12.1 0.0 1.1 1 0 0 1 1 1 0 GspL periplasmic domain Transketolase_N PF00456.21 gi|156938054|ref|YP_001435850.1| - 6.4e-41 140.4 0.0 1.3e-40 139.4 0.0 1.3 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|156938054|ref|YP_001435850.1| - 2.6e-12 46.5 1.1 0.00034 19.9 0.1 3.0 2 1 1 3 3 3 3 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 gi|156938054|ref|YP_001435850.1| - 7.5e-07 28.4 0.0 1.1e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|156938054|ref|YP_001435850.1| - 4e-05 23.4 0.1 0.00081 19.2 0.1 2.3 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain eIF-5_eIF-2B PF01873.17 gi|156938055|ref|YP_001435851.1| - 1.2e-35 121.9 0.0 1.4e-35 121.7 0.0 1.0 1 0 0 1 1 1 1 Domain found in IF2B/IF5 Lar_restr_allev PF14354.6 gi|156938055|ref|YP_001435851.1| - 0.018 15.4 0.3 0.063 13.7 0.4 1.8 2 0 0 2 2 2 0 Restriction alleviation protein Lar PriA_CRR PF18319.1 gi|156938055|ref|YP_001435851.1| - 0.026 14.5 1.6 0.04 13.9 0.1 2.0 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain DUF3797 PF12677.7 gi|156938055|ref|YP_001435851.1| - 0.032 14.1 0.0 0.46 10.4 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) Zn-ribbon_8 PF09723.10 gi|156938055|ref|YP_001435851.1| - 0.045 13.9 0.1 1.2 9.4 0.0 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DpnI PF06044.12 gi|156938055|ref|YP_001435851.1| - 0.047 13.3 0.0 0.085 12.5 0.0 1.4 1 0 0 1 1 1 0 Dam-replacing family RNA_POL_M_15KD PF02150.16 gi|156938055|ref|YP_001435851.1| - 0.053 13.4 0.2 0.27 11.2 0.2 2.0 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit Elf1 PF05129.13 gi|156938055|ref|YP_001435851.1| - 0.054 13.5 0.0 0.091 12.8 0.0 1.3 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like zf-NADH-PPase PF09297.11 gi|156938055|ref|YP_001435851.1| - 1.5 8.5 7.1 49 3.7 7.1 2.3 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain NOB1_Zn_bind PF08772.11 gi|156938055|ref|YP_001435851.1| - 1.6 8.9 4.9 2.8 8.2 0.4 2.7 2 1 1 3 3 3 0 Nin one binding (NOB1) Zn-ribbon like FtsX PF02687.21 gi|156938056|ref|YP_001435852.1| - 1.2e-08 35.3 6.1 1.2e-08 35.3 6.1 4.6 6 0 0 6 6 6 2 FtsX-like permease family LRR19-TM PF15176.6 gi|156938056|ref|YP_001435852.1| - 4.5 7.3 5.3 0.59 10.2 0.2 2.2 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain ABC_tran PF00005.27 gi|156938057|ref|YP_001435853.1| - 1.4e-31 109.8 0.0 1.8e-31 109.5 0.0 1.1 1 0 0 1 1 1 1 ABC transporter SMC_N PF02463.19 gi|156938057|ref|YP_001435853.1| - 2.2e-09 37.1 0.0 1.1e-05 25.0 0.0 2.1 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|156938057|ref|YP_001435853.1| - 1.3e-07 31.7 0.0 0.0087 15.9 0.0 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|156938057|ref|YP_001435853.1| - 0.00014 21.6 0.0 0.00024 20.8 0.0 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|156938057|ref|YP_001435853.1| - 0.00033 21.1 0.3 0.00056 20.3 0.3 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 gi|156938057|ref|YP_001435853.1| - 0.0023 18.1 0.1 0.011 15.9 0.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|156938057|ref|YP_001435853.1| - 0.0046 17.2 0.1 0.12 12.7 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|156938057|ref|YP_001435853.1| - 0.015 15.0 0.0 0.62 9.7 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|156938057|ref|YP_001435853.1| - 0.016 15.1 0.0 0.025 14.5 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 gi|156938057|ref|YP_001435853.1| - 0.034 13.9 0.1 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 gi|156938057|ref|YP_001435853.1| - 0.037 13.9 0.0 0.066 13.1 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_23 PF13476.6 gi|156938057|ref|YP_001435853.1| - 0.039 14.4 0.0 0.056 13.9 0.0 1.2 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|156938057|ref|YP_001435853.1| - 0.051 13.7 0.0 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase MeaB PF03308.16 gi|156938057|ref|YP_001435853.1| - 0.087 11.8 0.2 0.17 10.8 0.0 1.5 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|156938057|ref|YP_001435853.1| - 0.088 12.4 0.1 0.3 10.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 gi|156938057|ref|YP_001435853.1| - 0.1 11.7 0.0 0.19 10.9 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_18 PF13238.6 gi|156938057|ref|YP_001435853.1| - 0.11 13.1 0.0 0.24 12.0 0.0 1.6 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 gi|156938057|ref|YP_001435853.1| - 0.21 11.7 0.0 0.38 10.8 0.0 1.3 1 0 0 1 1 1 0 Helicase HerA, central domain Isochorismatase PF00857.20 gi|156938058|ref|YP_001435854.1| - 0.01 16.0 0.1 0.028 14.6 0.1 1.7 1 1 0 1 1 1 0 Isochorismatase family RHH_5 PF07878.11 gi|156938058|ref|YP_001435854.1| - 0.011 15.6 0.7 0.25 11.3 0.0 3.3 3 0 0 3 3 3 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 HeLo PF14479.6 gi|156938058|ref|YP_001435854.1| - 0.013 15.4 1.3 0.017 15.0 1.3 1.4 1 0 0 1 1 1 0 Prion-inhibition and propagation YabA PF06156.13 gi|156938058|ref|YP_001435854.1| - 0.014 16.0 1.1 0.037 14.6 0.6 2.0 1 1 1 2 2 2 0 Initiation control protein YabA DUF1778 PF08681.11 gi|156938058|ref|YP_001435854.1| - 0.033 14.1 0.5 10 6.2 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1778) LPP PF04728.13 gi|156938058|ref|YP_001435854.1| - 0.054 13.9 0.0 0.16 12.4 0.0 1.8 1 0 0 1 1 1 0 Lipoprotein leucine-zipper KfrA_N PF11740.8 gi|156938058|ref|YP_001435854.1| - 0.059 14.1 3.2 2.3 8.9 1.2 3.2 2 1 0 2 2 2 0 Plasmid replication region DNA-binding N-term Barstar PF01337.18 gi|156938058|ref|YP_001435854.1| - 0.067 13.2 0.0 0.28 11.2 0.0 2.1 2 0 0 2 2 2 0 Barstar (barnase inhibitor) GrpE PF01025.19 gi|156938058|ref|YP_001435854.1| - 0.068 12.8 8.1 0.048 13.3 4.2 2.4 1 1 1 2 2 2 0 GrpE Rod_C PF10493.9 gi|156938058|ref|YP_001435854.1| - 0.094 11.1 1.0 0.13 10.6 1.0 1.2 1 0 0 1 1 1 0 Rough deal protein C-terminal region SlyX PF04102.12 gi|156938058|ref|YP_001435854.1| - 0.12 13.1 0.2 0.12 13.1 0.2 3.1 4 0 0 4 4 3 0 SlyX CorA PF01544.18 gi|156938058|ref|YP_001435854.1| - 0.28 10.5 2.1 0.51 9.6 2.1 1.3 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein FapA PF03961.13 gi|156938058|ref|YP_001435854.1| - 0.6 8.6 4.4 0.84 8.2 4.4 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A PRESAN PF09687.10 gi|156938058|ref|YP_001435854.1| - 1.3 9.6 4.8 2.8 8.5 2.9 2.3 2 0 0 2 2 2 0 Plasmodium RESA N-terminal FlaC_arch PF05377.11 gi|156938058|ref|YP_001435854.1| - 2.9 8.4 6.0 19 5.8 1.1 3.1 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) ABC_tran_CTD PF16326.5 gi|156938058|ref|YP_001435854.1| - 3.7 7.9 13.1 1.8 8.9 2.0 3.8 3 1 0 4 4 4 0 ABC transporter C-terminal domain ZapB PF06005.12 gi|156938058|ref|YP_001435854.1| - 4.6 7.8 12.2 1.9 9.0 5.8 3.4 1 1 1 2 2 2 0 Cell division protein ZapB ParB_C PF18064.1 gi|156938058|ref|YP_001435854.1| - 6.9 6.9 10.2 17 5.7 0.0 3.9 3 1 1 4 4 4 0 Centromere-binding protein ParB C-terminal UPF0179 PF03684.13 gi|156938059|ref|YP_001435855.1| - 4.3e-20 72.0 0.4 6.1e-20 71.5 0.4 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0179) DDE_Tnp_1_6 PF13751.6 gi|156938059|ref|YP_001435855.1| - 0.31 11.3 2.7 1.9 8.8 0.1 2.3 2 0 0 2 2 2 0 Transposase DDE domain PAP2 PF01569.21 gi|156938060|ref|YP_001435856.1| - 4.7e-10 39.4 5.2 2e-08 34.1 4.9 2.7 1 1 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 gi|156938060|ref|YP_001435856.1| - 8.4e-08 32.1 6.3 2e-07 30.9 6.5 1.5 1 1 0 1 1 1 1 PAP2 superfamily Ribosomal_L27A PF00828.19 gi|156938061|ref|YP_001435857.1| - 1.9e-19 70.6 1.1 2e-19 70.5 0.3 1.4 1 1 1 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L30 PF00327.20 gi|156938062|ref|YP_001435858.1| - 1.7e-11 43.8 0.0 3.6e-11 42.8 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Integrase_H2C2 PF17921.1 gi|156938062|ref|YP_001435858.1| - 0.22 11.7 0.0 22 5.2 0.0 2.3 2 0 0 2 2 2 0 Integrase zinc binding domain Ribosomal_S5_C PF03719.15 gi|156938063|ref|YP_001435859.1| - 2.6e-27 94.1 0.0 4.5e-27 93.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Ribosomal_S5 PF00333.20 gi|156938063|ref|YP_001435859.1| - 1.3e-26 92.4 1.2 1e-24 86.3 0.7 2.4 2 0 0 2 2 2 2 Ribosomal protein S5, N-terminal domain Ribosomal_L5e PF17144.4 gi|156938064|ref|YP_001435860.1| - 5e-27 94.9 2.3 5.4e-19 68.8 1.1 2.7 2 1 1 3 3 3 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 gi|156938064|ref|YP_001435860.1| - 6.3e-10 39.9 0.4 6.3e-10 39.9 0.4 1.6 2 0 0 2 2 2 1 Ribosomal L18 C-terminal region Ribosomal_L18p PF00861.22 gi|156938064|ref|YP_001435860.1| - 6.9e-09 36.1 0.1 1e-08 35.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Cgr1 PF03879.14 gi|156938064|ref|YP_001435860.1| - 8.7 6.8 7.5 1 9.7 0.3 2.2 2 0 0 2 2 2 0 Cgr1 family Ribosomal_L19e PF01280.20 gi|156938065|ref|YP_001435861.1| - 2.2e-56 189.9 9.5 2.6e-56 189.7 9.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e S4 PF01479.25 gi|156938065|ref|YP_001435861.1| - 0.0099 15.6 0.1 0.036 13.8 0.2 2.0 1 1 0 1 1 1 1 S4 domain HTH_17 PF12728.7 gi|156938065|ref|YP_001435861.1| - 0.023 14.8 1.6 0.95 9.7 0.2 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain Vps35 PF03635.17 gi|156938065|ref|YP_001435861.1| - 0.094 11.2 0.0 0.12 10.8 0.0 1.1 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 35 HSR PF03172.13 gi|156938065|ref|YP_001435861.1| - 0.11 12.7 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 HSR domain Ribosomal_L32e PF01655.18 gi|156938066|ref|YP_001435862.1| - 1.4e-40 138.0 0.3 1.4e-40 138.0 0.3 1.6 2 0 0 2 2 2 1 Ribosomal protein L32 MCD_N PF17408.2 gi|156938066|ref|YP_001435862.1| - 0.15 12.2 0.2 0.32 11.2 0.1 1.6 2 0 0 2 2 2 0 Malonyl-CoA decarboxylase N-terminal domain Ribosomal_L6 PF00347.23 gi|156938067|ref|YP_001435863.1| - 3.4e-29 101.3 14.1 3e-15 56.7 4.9 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 DNA_pol3_beta PF00712.19 gi|156938067|ref|YP_001435863.1| - 0.041 14.0 0.0 0.38 10.9 0.0 2.2 2 0 0 2 2 2 0 DNA polymerase III beta subunit, N-terminal domain SUI1 PF01253.22 gi|156938068|ref|YP_001435864.1| - 6.8e-22 77.8 0.5 8.2e-22 77.5 0.5 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|156938068|ref|YP_001435864.1| - 0.0042 17.3 0.5 0.0053 17.0 0.5 1.3 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) DUF3387 PF11867.8 gi|156938068|ref|YP_001435864.1| - 0.012 15.0 0.0 0.018 14.4 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3387) Zn_Tnp_IS1595 PF12760.7 gi|156938069|ref|YP_001435865.1| - 2.2e-06 27.5 0.2 0.00074 19.4 0.1 2.1 2 0 0 2 2 2 1 Transposase zinc-ribbon domain DNA_RNApol_7kD PF03604.13 gi|156938069|ref|YP_001435865.1| - 8e-05 22.2 11.0 0.00053 19.6 11.0 2.0 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit NOB1_Zn_bind PF08772.11 gi|156938069|ref|YP_001435865.1| - 0.00071 19.7 0.2 0.00094 19.3 0.2 1.1 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zf-ribbon_3 PF13248.6 gi|156938069|ref|YP_001435865.1| - 0.0024 17.2 1.1 0.42 10.1 0.1 2.2 2 0 0 2 2 2 1 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|156938069|ref|YP_001435865.1| - 0.0033 17.3 0.3 0.35 10.8 0.0 2.3 2 0 0 2 2 2 1 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|156938069|ref|YP_001435865.1| - 0.0039 17.1 0.8 0.015 15.2 0.8 1.8 1 1 2 3 3 3 2 Putative transposase DNA-binding domain zf-ACC PF17848.1 gi|156938069|ref|YP_001435865.1| - 0.0061 16.6 2.2 0.86 9.7 0.2 2.3 2 0 0 2 2 2 1 Acetyl-coA carboxylase zinc finger domain zinc_ribbon_13 PF09855.9 gi|156938069|ref|YP_001435865.1| - 0.0077 16.4 1.8 0.1 12.8 0.0 2.1 1 1 1 2 2 2 1 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) zn-ribbon_14 PF16503.5 gi|156938069|ref|YP_001435865.1| - 0.013 15.0 4.6 0.28 10.7 0.2 2.3 2 0 0 2 2 2 0 Zinc-ribbon zinc_ribbon_2 PF13240.6 gi|156938069|ref|YP_001435865.1| - 0.013 15.2 2.2 0.24 11.2 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain HypA PF01155.19 gi|156938069|ref|YP_001435865.1| - 0.015 15.3 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-Mss51 PF13824.6 gi|156938069|ref|YP_001435865.1| - 0.018 15.2 2.0 1 9.5 0.1 2.1 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 TFIIS_C PF01096.18 gi|156938069|ref|YP_001435865.1| - 0.02 14.7 1.3 3.9 7.4 0.1 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Ribosomal_L37e PF01907.19 gi|156938069|ref|YP_001435865.1| - 0.024 14.8 1.8 2.3 8.5 0.1 2.1 2 0 0 2 2 2 0 Ribosomal protein L37e DZR PF12773.7 gi|156938069|ref|YP_001435865.1| - 0.024 14.6 0.9 0.47 10.5 1.3 1.9 1 1 1 2 2 2 0 Double zinc ribbon UPF0547 PF10571.9 gi|156938069|ref|YP_001435865.1| - 0.026 14.6 4.0 2.3 8.4 0.3 2.1 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 TF_Zn_Ribbon PF08271.12 gi|156938069|ref|YP_001435865.1| - 0.027 14.0 0.2 3.4 7.2 0.0 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|156938069|ref|YP_001435865.1| - 0.028 14.5 2.4 0.057 13.5 2.4 1.6 1 1 0 1 1 1 0 Zinc ribbon domain Cys_rich_CPCC PF14206.6 gi|156938069|ref|YP_001435865.1| - 0.032 14.0 0.9 4.5 7.2 0.1 2.1 2 0 0 2 2 2 0 Cysteine-rich CPCC IBR PF01485.21 gi|156938069|ref|YP_001435865.1| - 0.035 14.3 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain TackOD1 PF18551.1 gi|156938069|ref|YP_001435865.1| - 0.036 13.7 0.1 0.036 13.7 0.1 1.0 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Rubredoxin_2 PF18073.1 gi|156938069|ref|YP_001435865.1| - 0.04 13.6 5.1 0.43 10.3 0.7 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf_UBZ PF18439.1 gi|156938069|ref|YP_001435865.1| - 0.068 12.8 0.5 3.7 7.2 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Nudix_N_2 PF14803.6 gi|156938069|ref|YP_001435865.1| - 0.098 12.6 3.4 5.8 6.9 0.1 2.5 1 1 0 2 2 2 0 Nudix N-terminal zf-H2C2_2 PF13465.6 gi|156938069|ref|YP_001435865.1| - 0.1 13.1 0.7 6.1 7.5 0.1 2.2 2 0 0 2 2 2 0 Zinc-finger double domain He_PIG_assoc PF10632.9 gi|156938069|ref|YP_001435865.1| - 0.14 11.9 0.0 7.3 6.4 0.0 2.1 2 0 0 2 2 2 0 He_PIG associated, NEW1 domain of bacterial glycohydrolase DUF2072 PF09845.9 gi|156938069|ref|YP_001435865.1| - 0.15 12.3 0.2 0.16 12.2 0.2 1.1 1 0 0 1 1 1 0 Zn-ribbon containing protein RNA_POL_M_15KD PF02150.16 gi|156938069|ref|YP_001435865.1| - 0.17 11.8 3.8 1.1 9.2 0.3 2.1 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit C1_1 PF00130.22 gi|156938069|ref|YP_001435865.1| - 0.19 11.6 1.3 4.2 7.3 1.5 2.0 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF35_N PF12172.8 gi|156938069|ref|YP_001435865.1| - 0.22 11.4 3.3 7.6 6.5 0.5 2.3 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Mu-like_Com PF10122.9 gi|156938069|ref|YP_001435865.1| - 0.3 10.5 3.5 1.7 8.1 3.7 1.9 1 1 1 2 2 2 0 Mu-like prophage protein Com zinc_ribbon_5 PF13719.6 gi|156938069|ref|YP_001435865.1| - 0.53 10.1 4.5 3.7 7.4 0.1 2.4 1 1 2 3 3 3 0 zinc-ribbon domain Rubredoxin PF00301.20 gi|156938069|ref|YP_001435865.1| - 1.4 9.0 5.2 4.7 7.3 0.4 2.2 1 1 1 2 2 2 0 Rubredoxin Hydrolase_3 PF08282.12 gi|156938071|ref|YP_001435867.1| - 6.8e-28 98.1 0.1 3.9e-20 72.7 0.1 2.1 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|156938071|ref|YP_001435867.1| - 1.3e-10 41.9 3.1 1.9e-05 25.0 0.2 3.2 2 1 1 3 3 3 3 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|156938071|ref|YP_001435867.1| - 7.1e-10 38.8 0.1 8.4e-09 35.3 0.0 2.0 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD PF12710.7 gi|156938071|ref|YP_001435867.1| - 2.1e-06 28.3 0.5 0.013 15.9 0.0 3.1 2 1 1 3 3 3 2 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|156938071|ref|YP_001435867.1| - 0.0002 21.5 1.0 0.0043 17.2 0.2 2.6 2 2 1 3 3 3 1 Haloacid dehalogenase-like hydrolase Trehalose_PPase PF02358.16 gi|156938071|ref|YP_001435867.1| - 0.0007 18.8 0.1 0.019 14.1 0.1 2.1 2 0 0 2 2 2 1 Trehalose-phosphatase Hydrolase_6 PF13344.6 gi|156938071|ref|YP_001435867.1| - 0.0032 17.5 0.1 0.018 15.2 0.0 2.1 2 1 0 2 2 2 1 Haloacid dehalogenase-like hydrolase DEAD PF00270.29 gi|156938074|ref|YP_001435870.1| - 7.1e-26 91.0 0.0 8.5e-25 87.5 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|156938074|ref|YP_001435870.1| - 2.2e-10 40.9 0.0 8.5e-10 39.0 0.0 2.0 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|156938074|ref|YP_001435870.1| - 2.1e-09 37.6 0.0 3.7e-09 36.8 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|156938074|ref|YP_001435870.1| - 0.0012 19.1 0.0 0.0055 17.0 0.0 2.0 2 0 0 2 2 2 1 AAA domain HHH_5 PF14520.6 gi|156938074|ref|YP_001435870.1| - 0.0014 19.2 0.1 0.0077 16.8 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain ATPase_2 PF01637.18 gi|156938074|ref|YP_001435870.1| - 0.0021 18.0 0.0 0.0052 16.7 0.0 1.6 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea T2SSE PF00437.20 gi|156938074|ref|YP_001435870.1| - 0.012 14.7 0.0 0.023 13.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ATPase PF06745.13 gi|156938074|ref|YP_001435870.1| - 0.029 13.7 0.0 0.059 12.7 0.0 1.4 1 0 0 1 1 1 0 KaiC AAA_19 PF13245.6 gi|156938074|ref|YP_001435870.1| - 0.032 14.6 0.1 0.11 12.8 0.0 2.0 2 1 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|156938074|ref|YP_001435870.1| - 0.045 14.1 0.3 0.38 11.1 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain DNA_pol_lambd_f PF10391.9 gi|156938074|ref|YP_001435870.1| - 0.048 13.5 0.0 0.15 11.9 0.0 1.9 1 0 0 1 1 1 0 Fingers domain of DNA polymerase lambda IstB_IS21 PF01695.17 gi|156938074|ref|YP_001435870.1| - 0.072 12.8 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein EPSP_synthase PF00275.20 gi|156938075|ref|YP_001435871.1| - 1.6e-84 284.1 0.0 1.8e-84 283.9 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PAP2 PF01569.21 gi|156938077|ref|YP_001435873.1| - 0.0061 16.3 11.1 0.035 13.9 11.1 2.2 1 1 0 1 1 1 1 PAP2 superfamily DUF2542 PF10808.8 gi|156938077|ref|YP_001435873.1| - 0.041 14.4 0.0 0.11 13.0 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2542) NitrOD5 PF11537.8 gi|156938078|ref|YP_001435874.1| - 0.02 15.0 0.1 0.021 15.0 0.1 1.2 1 0 0 1 1 1 0 Nitrosopumilus output domain 5 RmuC PF02646.16 gi|156938078|ref|YP_001435874.1| - 0.089 11.9 0.1 0.11 11.6 0.1 1.1 1 0 0 1 1 1 0 RmuC family GCN5L1 PF06320.13 gi|156938078|ref|YP_001435874.1| - 0.12 12.5 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 GCN5-like protein 1 (GCN5L1) Ammonium_transp PF00909.21 gi|156938080|ref|YP_001435876.1| - 6.7e-115 384.0 29.1 7.6e-115 383.8 29.1 1.0 1 0 0 1 1 1 1 Ammonium Transporter Family Ost5 PF05251.12 gi|156938080|ref|YP_001435876.1| - 0.039 14.2 0.5 0.039 14.2 0.5 4.9 5 1 0 5 5 5 0 Oligosaccharyltransferase subunit 5 P-II PF00543.22 gi|156938081|ref|YP_001435877.1| - 1.9e-32 111.9 0.9 2.1e-32 111.7 0.9 1.0 1 0 0 1 1 1 1 Nitrogen regulatory protein P-II ABC_ATPase PF09818.9 gi|156938081|ref|YP_001435877.1| - 0.034 12.9 0.2 0.077 11.8 0.0 1.5 2 0 0 2 2 2 0 Predicted ATPase of the ABC class Nit_Regul_Hom PF10126.9 gi|156938081|ref|YP_001435877.1| - 0.093 12.8 0.0 2.9 8.0 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII Cdc6_C PF09079.11 gi|156938082|ref|YP_001435878.1| - 8.8e-19 67.3 0.0 9.9e-18 63.9 0.0 2.3 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|156938082|ref|YP_001435878.1| - 1.3e-08 35.2 0.0 3.7e-08 33.7 0.0 1.8 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|156938082|ref|YP_001435878.1| - 2.8e-06 27.4 0.7 7.8e-06 26.0 0.7 1.7 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|156938082|ref|YP_001435878.1| - 3e-06 27.7 0.4 0.00029 21.3 0.0 3.1 1 1 1 2 2 2 1 AAA ATPase domain NB-ARC PF00931.22 gi|156938082|ref|YP_001435878.1| - 0.0026 17.0 0.0 0.0057 15.9 0.0 1.5 1 1 0 1 1 1 1 NB-ARC domain NACHT PF05729.12 gi|156938082|ref|YP_001435878.1| - 0.025 14.5 0.0 0.044 13.7 0.0 1.4 1 0 0 1 1 1 0 NACHT domain TrmB PF01978.19 gi|156938082|ref|YP_001435878.1| - 0.078 12.9 0.3 0.21 11.5 0.3 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Antimicrobial12 PF08107.11 gi|156938082|ref|YP_001435878.1| - 0.14 11.9 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 Pleurocidin family CbiA PF01656.23 gi|156938082|ref|YP_001435878.1| - 0.15 12.1 0.0 1.1 9.3 0.0 2.4 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain HTH_5 PF01022.20 gi|156938083|ref|YP_001435879.1| - 0.00029 20.6 0.0 0.00038 20.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|156938083|ref|YP_001435879.1| - 0.00068 19.1 0.0 0.0013 18.3 0.0 1.4 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|156938083|ref|YP_001435879.1| - 0.014 15.3 0.1 0.017 15.0 0.1 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|156938083|ref|YP_001435879.1| - 0.023 14.6 0.0 0.027 14.3 0.0 1.1 1 0 0 1 1 1 0 MarR family HTH_IclR PF09339.10 gi|156938083|ref|YP_001435879.1| - 0.03 14.1 0.0 0.049 13.4 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain FeoC PF09012.10 gi|156938083|ref|YP_001435879.1| - 0.055 13.5 0.0 0.086 12.9 0.0 1.4 1 1 0 1 1 1 0 FeoC like transcriptional regulator Rrf2 PF02082.20 gi|156938083|ref|YP_001435879.1| - 0.074 13.4 0.0 0.083 13.2 0.0 1.1 1 0 0 1 1 1 0 Transcriptional regulator MarR PF01047.22 gi|156938083|ref|YP_001435879.1| - 0.087 12.8 0.0 0.11 12.4 0.0 1.2 1 0 0 1 1 1 0 MarR family MCM PF00493.23 gi|156938084|ref|YP_001435880.1| - 3e-102 340.5 0.0 5e-102 339.8 0.0 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 gi|156938084|ref|YP_001435880.1| - 8e-37 125.9 0.0 1.5e-36 125.0 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 gi|156938084|ref|YP_001435880.1| - 9.8e-28 96.4 1.3 2.3e-27 95.2 1.3 1.7 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 gi|156938084|ref|YP_001435880.1| - 4.3e-15 56.2 2.2 1.2e-14 54.8 0.8 2.3 2 0 0 2 2 2 1 MCM N-terminal domain AAA_5 PF07728.14 gi|156938084|ref|YP_001435880.1| - 1.9e-09 37.7 0.0 5.6e-09 36.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|156938084|ref|YP_001435880.1| - 8.7e-08 31.8 0.1 2.5e-05 23.8 0.0 2.4 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|156938084|ref|YP_001435880.1| - 2.4e-06 27.5 0.0 7.1e-06 25.9 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|156938084|ref|YP_001435880.1| - 0.00053 19.7 0.1 0.0031 17.2 0.1 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_16 PF13191.6 gi|156938084|ref|YP_001435880.1| - 0.0094 16.3 0.2 0.039 14.3 0.2 2.2 1 1 0 1 1 1 1 AAA ATPase domain Mnd1 PF03962.15 gi|156938084|ref|YP_001435880.1| - 0.018 15.3 0.2 0.05 13.9 0.2 1.7 1 0 0 1 1 1 0 Mnd1 HTH domain Zn-ribbon_8 PF09723.10 gi|156938084|ref|YP_001435880.1| - 0.043 13.9 3.0 0.12 12.5 3.0 1.7 1 0 0 1 1 1 0 Zinc ribbon domain V-ATPase_H_N PF03224.14 gi|156938084|ref|YP_001435880.1| - 0.087 12.1 0.1 0.47 9.7 0.0 2.2 3 1 0 3 3 3 0 V-ATPase subunit H CMD PF02627.20 gi|156938084|ref|YP_001435880.1| - 0.09 12.8 1.6 1.8 8.7 0.1 2.6 2 0 0 2 2 2 0 Carboxymuconolactone decarboxylase family RPA_C PF08784.11 gi|156938084|ref|YP_001435880.1| - 0.12 13.0 0.1 0.35 11.6 0.1 1.7 1 0 0 1 1 1 0 Replication protein A C terminal AAA_2 PF07724.14 gi|156938084|ref|YP_001435880.1| - 0.15 12.1 1.2 3.2 7.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 gi|156938084|ref|YP_001435880.1| - 0.15 11.5 0.0 0.35 10.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region PPDK_N PF01326.19 gi|156938084|ref|YP_001435880.1| - 1.2 8.3 4.9 0.42 9.8 0.3 2.3 3 0 0 3 3 3 0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AAA_30 PF13604.6 gi|156938084|ref|YP_001435880.1| - 3.5 7.3 6.6 0.4 10.4 1.6 2.0 3 0 0 3 3 3 0 AAA domain Sld5 PF05916.11 gi|156938085|ref|YP_001435881.1| - 1.2e-08 35.4 0.7 1.8e-08 34.8 0.7 1.3 1 0 0 1 1 1 1 GINS complex protein Polysacc_syn_2C PF08485.10 gi|156938085|ref|YP_001435881.1| - 0.035 13.8 1.3 4.2 7.2 0.1 2.5 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein C-terminal Rep_fac_C PF08542.11 gi|156938086|ref|YP_001435882.1| - 5.5e-20 71.6 0.1 2e-19 69.8 0.0 2.0 2 0 0 2 2 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.6 gi|156938086|ref|YP_001435882.1| - 5.7e-15 55.5 0.0 2.4e-10 40.4 0.0 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit AAA PF00004.29 gi|156938086|ref|YP_001435882.1| - 8.5e-14 52.1 0.0 1.4e-13 51.4 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|156938086|ref|YP_001435882.1| - 6.4e-07 29.3 0.0 1.5e-06 28.0 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 gi|156938086|ref|YP_001435882.1| - 1.3e-06 28.4 0.0 6e-06 26.3 0.0 1.9 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_assoc_2 PF16193.5 gi|156938086|ref|YP_001435882.1| - 2e-06 28.1 0.0 5.6e-06 26.6 0.0 1.8 1 0 0 1 1 1 1 AAA C-terminal domain AAA_22 PF13401.6 gi|156938086|ref|YP_001435882.1| - 2.7e-06 27.7 0.1 0.084 13.1 0.0 2.7 1 1 1 2 2 2 2 AAA domain AAA_3 PF07726.11 gi|156938086|ref|YP_001435882.1| - 2.8e-06 27.2 0.0 4.8e-06 26.5 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta PF06144.13 gi|156938086|ref|YP_001435882.1| - 3e-06 27.1 0.0 6.1e-06 26.1 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_14 PF13173.6 gi|156938086|ref|YP_001435882.1| - 9.3e-06 25.7 0.1 0.00015 21.8 0.0 2.2 1 1 1 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|156938086|ref|YP_001435882.1| - 1.8e-05 25.2 0.0 0.024 15.0 0.0 2.4 1 1 1 2 2 2 2 AAA ATPase domain PhoH PF02562.16 gi|156938086|ref|YP_001435882.1| - 3.8e-05 23.2 0.1 0.035 13.5 0.0 2.4 1 1 1 2 2 2 2 PhoH-like protein AAA_18 PF13238.6 gi|156938086|ref|YP_001435882.1| - 0.00013 22.5 0.0 0.001 19.6 0.0 2.3 1 1 1 2 2 2 1 AAA domain ResIII PF04851.15 gi|156938086|ref|YP_001435882.1| - 0.00017 21.6 0.0 0.0037 17.3 0.0 2.1 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 gi|156938086|ref|YP_001435882.1| - 0.00044 20.0 0.0 0.00099 18.9 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_11 PF13086.6 gi|156938086|ref|YP_001435882.1| - 0.00046 20.1 0.0 0.0016 18.3 0.0 1.7 1 1 1 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|156938086|ref|YP_001435882.1| - 0.00095 19.2 0.1 0.0061 16.6 0.1 2.3 2 1 0 2 2 1 1 AAA domain (dynein-related subfamily) ATPase_2 PF01637.18 gi|156938086|ref|YP_001435882.1| - 0.0015 18.5 0.0 0.0087 16.0 0.0 1.9 1 1 1 2 2 2 1 ATPase domain predominantly from Archaea AAA_7 PF12775.7 gi|156938086|ref|YP_001435882.1| - 0.0015 18.0 0.0 0.0023 17.5 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_25 PF13481.6 gi|156938086|ref|YP_001435882.1| - 0.0026 17.3 0.3 0.008 15.8 0.3 1.9 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|156938086|ref|YP_001435882.1| - 0.0029 17.0 0.0 0.06 12.7 0.0 2.2 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI DEAD PF00270.29 gi|156938086|ref|YP_001435882.1| - 0.0043 16.8 0.2 1.1 9.0 0.0 2.3 1 1 0 2 2 2 1 DEAD/DEAH box helicase AAA_24 PF13479.6 gi|156938086|ref|YP_001435882.1| - 0.0054 16.5 0.0 0.0098 15.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|156938086|ref|YP_001435882.1| - 0.0073 16.0 0.2 0.039 13.7 0.1 2.2 2 1 0 2 2 1 1 AAA domain RsbU_N PF08673.10 gi|156938086|ref|YP_001435882.1| - 0.0082 16.2 0.4 0.14 12.3 0.0 2.9 3 1 1 4 4 2 1 Phosphoserine phosphatase RsbU, N-terminal domain Viral_helicase1 PF01443.18 gi|156938086|ref|YP_001435882.1| - 0.0089 15.8 0.0 0.018 14.8 0.0 1.5 2 0 0 2 2 1 1 Viral (Superfamily 1) RNA helicase TIP49 PF06068.13 gi|156938086|ref|YP_001435882.1| - 0.0092 15.2 0.0 0.015 14.6 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain DUF815 PF05673.13 gi|156938086|ref|YP_001435882.1| - 0.01 15.0 0.0 0.018 14.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_28 PF13521.6 gi|156938086|ref|YP_001435882.1| - 0.012 15.9 0.0 0.021 15.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|156938086|ref|YP_001435882.1| - 0.014 15.5 0.1 0.035 14.3 0.1 1.8 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|156938086|ref|YP_001435882.1| - 0.017 14.2 0.0 0.073 12.1 0.0 1.8 2 0 0 2 2 2 0 Type II/IV secretion system protein RNA_helicase PF00910.22 gi|156938086|ref|YP_001435882.1| - 0.019 15.4 0.0 0.07 13.5 0.0 1.9 1 1 0 1 1 1 0 RNA helicase NACHT PF05729.12 gi|156938086|ref|YP_001435882.1| - 0.032 14.2 0.0 0.37 10.7 0.0 2.2 1 1 0 1 1 1 0 NACHT domain TniB PF05621.11 gi|156938086|ref|YP_001435882.1| - 0.033 13.6 0.1 2.3 7.6 0.0 2.3 1 1 0 2 2 2 0 Bacterial TniB protein DUF2075 PF09848.9 gi|156938086|ref|YP_001435882.1| - 0.033 13.4 0.1 0.37 10.0 0.1 2.1 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 gi|156938086|ref|YP_001435882.1| - 0.037 14.4 0.2 0.77 10.1 0.1 2.2 1 1 1 2 2 2 0 AAA domain KTI12 PF08433.10 gi|156938086|ref|YP_001435882.1| - 0.045 13.2 0.0 0.066 12.7 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 Sigma54_activat PF00158.26 gi|156938086|ref|YP_001435882.1| - 0.062 13.0 0.0 1.4 8.6 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain FtsK_SpoIIIE PF01580.18 gi|156938086|ref|YP_001435882.1| - 0.073 12.4 0.0 0.16 11.3 0.0 1.6 1 0 0 1 1 1 0 FtsK/SpoIIIE family TIP49_C PF17856.1 gi|156938086|ref|YP_001435882.1| - 0.13 12.4 0.1 0.3 11.2 0.1 1.6 1 0 0 1 1 1 0 TIP49 AAA-lid domain CbiA PF01656.23 gi|156938086|ref|YP_001435882.1| - 0.15 12.1 0.0 0.39 10.8 0.0 2.0 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain RFC1 PF08519.12 gi|156938087|ref|YP_001435883.1| - 1.2e-23 84.0 0.2 1.8e-23 83.5 0.2 1.3 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain AAA PF00004.29 gi|156938087|ref|YP_001435883.1| - 5.7e-15 55.9 0.0 4e-14 53.2 0.0 2.2 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|156938087|ref|YP_001435883.1| - 1.6e-06 28.0 0.0 2.8e-06 27.2 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 gi|156938087|ref|YP_001435883.1| - 6.5e-06 25.5 0.0 1.3e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_16 PF13191.6 gi|156938087|ref|YP_001435883.1| - 5.4e-05 23.6 0.0 0.00024 21.5 0.0 2.1 2 1 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|156938087|ref|YP_001435883.1| - 0.00019 21.7 0.1 0.043 14.1 0.0 3.5 2 1 2 4 4 4 1 AAA domain AAA_23 PF13476.6 gi|156938087|ref|YP_001435883.1| - 0.00038 21.0 0.5 0.24 11.9 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|156938087|ref|YP_001435883.1| - 0.00071 19.6 0.0 0.0042 17.1 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 gi|156938087|ref|YP_001435883.1| - 0.00084 19.3 0.0 0.002 18.1 0.0 1.6 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_7 PF12775.7 gi|156938087|ref|YP_001435883.1| - 0.0025 17.4 0.1 0.028 13.9 0.0 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_14 PF13173.6 gi|156938087|ref|YP_001435883.1| - 0.0028 17.7 0.0 0.0097 15.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 gi|156938087|ref|YP_001435883.1| - 0.0042 16.9 0.5 0.074 12.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 gi|156938087|ref|YP_001435883.1| - 0.0043 17.0 0.0 0.088 12.7 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase NACHT PF05729.12 gi|156938087|ref|YP_001435883.1| - 0.0043 17.0 0.0 0.6 10.0 0.0 2.6 2 0 0 2 2 2 1 NACHT domain IstB_IS21 PF01695.17 gi|156938087|ref|YP_001435883.1| - 0.0082 15.9 0.0 0.041 13.6 0.0 2.0 1 1 0 1 1 1 1 IstB-like ATP binding protein DNA_pol3_delta PF06144.13 gi|156938087|ref|YP_001435883.1| - 0.0083 15.9 2.4 0.011 15.5 0.0 2.2 2 0 0 2 2 2 1 DNA polymerase III, delta subunit AAA_25 PF13481.6 gi|156938087|ref|YP_001435883.1| - 0.0085 15.7 0.1 0.056 13.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_assoc_2 PF16193.5 gi|156938087|ref|YP_001435883.1| - 0.016 15.5 0.0 0.059 13.7 0.0 2.0 1 0 0 1 1 1 0 AAA C-terminal domain Parvo_NS1 PF01057.17 gi|156938087|ref|YP_001435883.1| - 0.017 14.2 0.0 0.042 12.9 0.0 1.6 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 RNA_helicase PF00910.22 gi|156938087|ref|YP_001435883.1| - 0.03 14.7 0.0 0.099 13.0 0.0 1.9 2 0 0 2 2 1 0 RNA helicase ABC_tran PF00005.27 gi|156938087|ref|YP_001435883.1| - 0.034 14.7 0.0 0.12 12.9 0.0 1.9 2 0 0 2 2 1 0 ABC transporter AAA_18 PF13238.6 gi|156938087|ref|YP_001435883.1| - 0.039 14.5 0.1 0.29 11.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain Roc PF08477.13 gi|156938087|ref|YP_001435883.1| - 0.048 13.9 0.0 0.14 12.4 0.0 1.7 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase TniB PF05621.11 gi|156938087|ref|YP_001435883.1| - 0.054 12.9 0.0 0.74 9.2 0.0 2.5 2 1 1 3 3 3 0 Bacterial TniB protein AAA_19 PF13245.6 gi|156938087|ref|YP_001435883.1| - 0.066 13.5 0.0 0.18 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain DUF4287 PF14117.6 gi|156938087|ref|YP_001435883.1| - 0.1 12.8 0.2 6.8 6.9 0.1 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF4287) MMR_HSR1 PF01926.23 gi|156938087|ref|YP_001435883.1| - 0.11 12.6 0.0 0.31 11.1 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase AFG1_ATPase PF03969.16 gi|156938087|ref|YP_001435883.1| - 0.12 11.2 0.0 0.47 9.3 0.0 1.8 2 0 0 2 2 2 0 AFG1-like ATPase AAA_29 PF13555.6 gi|156938087|ref|YP_001435883.1| - 0.16 11.7 0.0 0.33 10.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain tRNA-synt_1b PF00579.25 gi|156938088|ref|YP_001435884.1| - 1.6e-25 90.0 0.0 2.3e-25 89.5 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) FTO_CTD PF12934.7 gi|156938089|ref|YP_001435885.1| - 0.063 13.0 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 FTO C-terminal domain DUF2070 PF09843.9 gi|156938091|ref|YP_001435887.1| - 4.5e-09 35.1 0.1 1.1e-08 33.8 0.0 1.7 2 1 0 2 2 2 1 Predicted membrane protein (DUF2070) ATP-synt_ab PF00006.25 gi|156938092|ref|YP_001435888.1| - 9e-88 293.5 0.0 1.2e-87 293.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|156938092|ref|YP_001435888.1| - 1.8e-44 150.5 0.0 3.3e-44 149.6 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|156938092|ref|YP_001435888.1| - 1.4e-13 51.1 7.8 2.8e-13 50.2 7.8 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|156938092|ref|YP_001435888.1| - 0.0017 18.6 0.1 0.0048 17.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain DHHA1 PF02272.19 gi|156938093|ref|YP_001435889.1| - 8.1e-10 39.3 0.3 2e-09 38.0 0.1 1.7 2 0 0 2 2 2 1 DHHA1 domain DHH PF01368.20 gi|156938093|ref|YP_001435889.1| - 0.0015 18.7 0.0 0.0025 18.0 0.0 1.3 1 0 0 1 1 1 1 DHH family Methyltransf_25 PF13649.6 gi|156938094|ref|YP_001435890.1| - 8.3e-08 32.8 0.0 6e-07 30.1 0.0 2.3 3 0 0 3 3 3 1 Methyltransferase domain MTS PF05175.14 gi|156938094|ref|YP_001435890.1| - 6.5e-07 29.1 0.0 1e-06 28.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|156938094|ref|YP_001435890.1| - 1.7e-06 28.6 0.0 2e-05 25.1 0.0 2.4 2 1 1 3 3 2 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|156938094|ref|YP_001435890.1| - 3.2e-06 26.9 0.0 5.3e-06 26.2 0.0 1.3 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Spermine_synth PF01564.17 gi|156938094|ref|YP_001435890.1| - 6.6e-06 25.7 0.0 1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Methyltransf_30 PF05430.11 gi|156938094|ref|YP_001435890.1| - 1.7e-05 24.7 0.0 3.9e-05 23.5 0.0 1.6 1 1 0 1 1 1 1 S-adenosyl-L-methionine-dependent methyltransferase Met_10 PF02475.16 gi|156938094|ref|YP_001435890.1| - 0.00021 21.1 0.0 0.00041 20.1 0.0 1.4 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_31 PF13847.6 gi|156938094|ref|YP_001435890.1| - 0.00035 20.4 0.0 0.00055 19.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|156938094|ref|YP_001435890.1| - 0.001 18.8 0.0 0.0042 16.8 0.0 1.8 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F N6_N4_Mtase PF01555.18 gi|156938094|ref|YP_001435890.1| - 0.0011 18.7 0.0 0.13 12.0 0.0 2.1 2 0 0 2 2 2 1 DNA methylase Ubie_methyltran PF01209.18 gi|156938094|ref|YP_001435890.1| - 0.02 14.2 0.1 0.37 10.1 0.1 2.6 1 1 1 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|156938094|ref|YP_001435890.1| - 0.061 13.1 0.0 0.16 11.8 0.0 1.8 1 1 1 2 2 2 0 Methyltransferase domain CMAS PF02353.20 gi|156938094|ref|YP_001435890.1| - 0.098 11.9 0.0 0.19 11.0 0.0 1.4 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|156938094|ref|YP_001435890.1| - 0.1 12.0 0.0 0.13 11.6 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) SAM_MT PF04445.13 gi|156938094|ref|YP_001435890.1| - 0.18 11.2 0.0 0.25 10.7 0.0 1.1 1 0 0 1 1 1 0 Putative SAM-dependent methyltransferase CENP-F_leu_zip PF10473.9 gi|156938095|ref|YP_001435891.1| - 0.11 12.6 0.7 0.27 11.3 0.1 1.9 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Big_6 PF17936.1 gi|156938096|ref|YP_001435892.1| - 0.039 14.2 0.5 0.068 13.5 0.5 1.4 1 0 0 1 1 1 0 Bacterial Ig domain Gram_pos_anchor PF00746.21 gi|156938096|ref|YP_001435892.1| - 0.093 12.7 0.9 0.093 12.7 0.9 2.0 2 0 0 2 2 2 0 LPXTG cell wall anchor motif LptF_LptG PF03739.14 gi|156938096|ref|YP_001435892.1| - 0.12 11.2 0.4 0.12 11.2 0.1 1.3 1 1 0 1 1 1 0 Lipopolysaccharide export system permease LptF/LptG Rubrerythrin PF02915.17 gi|156938097|ref|YP_001435893.1| - 2.3e-08 34.5 13.2 2.1e-06 28.2 1.7 2.3 2 0 0 2 2 2 2 Rubrerythrin FA_desaturase_2 PF03405.14 gi|156938097|ref|YP_001435893.1| - 0.0004 19.3 0.0 0.00077 18.4 0.0 1.4 1 1 0 1 1 1 1 Fatty acid desaturase Ferritin_2 PF13668.6 gi|156938097|ref|YP_001435893.1| - 0.00073 19.7 3.1 0.077 13.2 0.0 2.7 2 1 0 2 2 2 1 Ferritin-like domain VIT1 PF01988.19 gi|156938097|ref|YP_001435893.1| - 0.00075 19.4 18.5 0.003 17.5 4.9 2.9 2 1 1 3 3 3 2 VIT family COQ7 PF03232.13 gi|156938097|ref|YP_001435893.1| - 0.0078 16.0 2.5 0.24 11.2 2.4 2.5 1 1 0 1 1 1 1 Ubiquinone biosynthesis protein COQ7 Ferritin PF00210.24 gi|156938097|ref|YP_001435893.1| - 0.019 14.9 2.4 1 9.2 0.1 2.3 2 0 0 2 2 2 0 Ferritin-like domain Tad PF13400.6 gi|156938097|ref|YP_001435893.1| - 0.043 14.1 0.2 0.043 14.1 0.2 2.7 3 0 0 3 3 2 0 Putative Flp pilus-assembly TadE/G-like FbpA PF05833.11 gi|156938097|ref|YP_001435893.1| - 0.047 12.5 1.7 0.058 12.2 1.7 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) MARVEL PF01284.23 gi|156938097|ref|YP_001435893.1| - 0.098 12.7 4.4 0.17 11.9 4.4 1.4 1 0 0 1 1 1 0 Membrane-associating domain 5TM-5TMR_LYT PF07694.12 gi|156938097|ref|YP_001435893.1| - 0.21 11.1 12.2 0.63 9.5 2.8 2.3 2 0 0 2 2 2 0 5TMR of 5TMR-LYT MpPF26 PF07666.11 gi|156938097|ref|YP_001435893.1| - 1.2 9.2 7.1 16 5.6 7.4 2.1 1 1 1 2 2 2 0 M penetrans paralogue family 26 NHL PF01436.21 gi|156938099|ref|YP_001435895.1| - 0.02 14.9 0.8 13 6.0 0.0 3.8 4 0 0 4 4 4 0 NHL repeat Myosin_tail_1 PF01576.19 gi|156938100|ref|YP_001435896.1| - 0.082 10.7 0.1 0.091 10.6 0.1 1.0 1 0 0 1 1 1 0 Myosin tail DUF2031 PF09592.10 gi|156938100|ref|YP_001435896.1| - 0.1 12.1 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2031) UPAR_LY6_2 PF16975.5 gi|156938101|ref|YP_001435897.1| - 5.2 7.3 7.8 1.1 9.5 3.3 2.1 2 1 0 2 2 2 0 Ly6/PLAUR domain-containing protein 6, Lypd6 tRNA_bind PF01588.20 gi|156938104|ref|YP_001435900.1| - 2e-13 50.3 0.0 2.9e-13 49.7 0.0 1.3 1 0 0 1 1 1 1 Putative tRNA binding domain Alpha_Helical PF18489.1 gi|156938104|ref|YP_001435900.1| - 0.033 14.4 0.0 0.051 13.8 0.0 1.3 1 0 0 1 1 1 0 Alpha helical domain CBS PF00571.28 gi|156938106|ref|YP_001435902.1| - 3.3e-24 85.1 6.6 3.6e-11 43.3 0.3 3.7 4 0 0 4 4 4 3 CBS domain PRC PF05239.16 gi|156938106|ref|YP_001435902.1| - 0.24 11.5 6.5 0.49 10.5 0.3 3.7 4 1 0 4 4 4 0 PRC-barrel domain UPF0128 PF03673.13 gi|156938107|ref|YP_001435903.1| - 0.091 12.2 0.0 0.14 11.6 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0128) TPR_10 PF13374.6 gi|156938107|ref|YP_001435903.1| - 0.19 11.7 5.2 24 5.0 0.7 3.8 3 1 1 4 4 4 0 Tetratricopeptide repeat DUF3979 PF13141.6 gi|156938108|ref|YP_001435904.1| - 0.1 12.8 0.0 0.22 11.8 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3979) DUF2614 PF11023.8 gi|156938109|ref|YP_001435905.1| - 0.0032 17.5 4.0 0.0039 17.3 4.0 1.1 1 0 0 1 1 1 1 Zinc-ribbon containing domain DUF1129 PF06570.11 gi|156938109|ref|YP_001435905.1| - 0.026 14.0 2.1 0.027 14.0 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) CstA PF02554.14 gi|156938111|ref|YP_001435907.1| - 3.8e-106 355.2 23.4 3.8e-106 355.2 23.4 2.1 2 0 0 2 2 2 1 Carbon starvation protein CstA CstA_5TM PF13722.6 gi|156938111|ref|YP_001435907.1| - 3.9e-28 98.2 11.0 3.9e-28 98.2 11.0 3.5 3 1 0 3 3 3 1 5TM C-terminal transporter carbon starvation CstA TraQ PF09679.10 gi|156938111|ref|YP_001435907.1| - 1.7 8.6 7.9 0.42 10.6 0.1 3.4 3 0 0 3 3 3 0 Type-F conjugative transfer system pilin chaperone (TraQ) ArsA_ATPase PF02374.15 gi|156938113|ref|YP_001435909.1| - 7e-67 225.8 0.0 8e-67 225.6 0.0 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 gi|156938113|ref|YP_001435909.1| - 4.5e-12 46.1 0.0 1.3e-11 44.6 0.0 1.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|156938113|ref|YP_001435909.1| - 9.2e-10 38.7 0.0 2.4e-09 37.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|156938113|ref|YP_001435909.1| - 1.7e-06 27.6 1.8 0.019 14.4 0.6 3.1 3 0 0 3 3 3 2 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|156938113|ref|YP_001435909.1| - 0.00093 18.7 0.0 0.016 14.7 0.0 2.3 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ATP_bind_1 PF03029.17 gi|156938113|ref|YP_001435909.1| - 0.0022 17.8 1.2 0.16 11.7 0.1 2.6 3 0 0 3 3 3 1 Conserved hypothetical ATP binding protein PhoH PF02562.16 gi|156938113|ref|YP_001435909.1| - 0.005 16.3 0.0 0.0092 15.5 0.0 1.5 1 0 0 1 1 1 1 PhoH-like protein SRP54 PF00448.22 gi|156938113|ref|YP_001435909.1| - 0.016 14.9 0.2 0.038 13.6 0.2 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_24 PF13479.6 gi|156938113|ref|YP_001435909.1| - 0.093 12.4 0.0 0.19 11.4 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|156938113|ref|YP_001435909.1| - 0.4 11.1 2.1 24 5.3 0.0 2.6 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Methyltransf_31 PF13847.6 gi|156938115|ref|YP_001435911.1| - 1.7e-09 37.6 0.0 2.4e-09 37.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|156938115|ref|YP_001435911.1| - 3e-09 37.5 0.0 4.3e-09 36.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|156938115|ref|YP_001435911.1| - 2.6e-08 33.9 0.0 3.8e-08 33.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain DOT1 PF08123.13 gi|156938115|ref|YP_001435911.1| - 6.5e-08 32.4 0.0 5.2e-07 29.4 0.0 2.0 1 1 0 1 1 1 1 Histone methylation protein DOT1 RrnaAD PF00398.20 gi|156938115|ref|YP_001435911.1| - 6.2e-06 25.5 0.0 9.6e-06 24.8 0.0 1.3 1 1 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|156938115|ref|YP_001435911.1| - 6.6e-06 26.7 0.0 1.2e-05 25.8 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain TrmK PF04816.12 gi|156938115|ref|YP_001435911.1| - 2.5e-05 23.9 0.0 3e-05 23.6 0.0 1.3 1 1 0 1 1 1 1 tRNA (adenine(22)-N(1))-methyltransferase PrmA PF06325.13 gi|156938115|ref|YP_001435911.1| - 2.8e-05 23.7 0.0 3.6e-05 23.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) PCMT PF01135.19 gi|156938115|ref|YP_001435911.1| - 3e-05 23.9 0.1 4.4e-05 23.3 0.1 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CMAS PF02353.20 gi|156938115|ref|YP_001435911.1| - 0.00032 20.1 0.0 0.00034 20.0 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase UPF0020 PF01170.18 gi|156938115|ref|YP_001435911.1| - 0.00062 19.5 0.1 0.047 13.4 0.1 2.2 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 MTS PF05175.14 gi|156938115|ref|YP_001435911.1| - 0.0024 17.5 0.0 0.0032 17.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|156938115|ref|YP_001435911.1| - 0.0036 16.8 0.0 0.0046 16.4 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_2 PF00891.18 gi|156938115|ref|YP_001435911.1| - 0.026 13.8 0.0 0.032 13.5 0.0 1.2 1 0 0 1 1 1 0 O-methyltransferase domain IGPS PF00218.21 gi|156938116|ref|YP_001435912.1| - 1.1e-51 175.5 0.0 1.4e-51 175.2 0.0 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase ABC_tran PF00005.27 gi|156938117|ref|YP_001435913.1| - 3.3e-29 102.1 0.0 5.1e-29 101.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|156938117|ref|YP_001435913.1| - 2e-14 53.9 0.1 4.1e-14 52.9 0.1 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|156938117|ref|YP_001435913.1| - 4.3e-05 23.5 0.0 0.0031 17.4 0.0 2.1 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156938117|ref|YP_001435913.1| - 0.00013 21.4 0.0 0.0037 16.7 0.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|156938117|ref|YP_001435913.1| - 0.00023 21.4 0.8 0.038 14.3 0.8 2.2 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|156938117|ref|YP_001435913.1| - 0.0023 18.1 0.0 0.0052 16.9 0.0 1.7 1 1 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 gi|156938117|ref|YP_001435913.1| - 0.0032 17.4 0.0 0.0055 16.6 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA_13 PF13166.6 gi|156938117|ref|YP_001435913.1| - 0.0085 14.8 0.1 0.042 12.5 0.2 1.8 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 gi|156938117|ref|YP_001435913.1| - 0.022 15.3 0.0 0.043 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|156938117|ref|YP_001435913.1| - 0.031 13.7 0.3 0.79 9.1 0.2 2.3 2 0 0 2 2 2 0 Bacterial TniB protein AAA_29 PF13555.6 gi|156938117|ref|YP_001435913.1| - 0.045 13.5 0.0 0.082 12.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|156938117|ref|YP_001435913.1| - 0.055 13.2 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain ATPase PF06745.13 gi|156938117|ref|YP_001435913.1| - 0.056 12.8 1.9 0.6 9.4 0.0 2.4 3 0 0 3 3 3 0 KaiC NACHT PF05729.12 gi|156938117|ref|YP_001435913.1| - 0.063 13.2 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Sigma54_activ_2 PF14532.6 gi|156938117|ref|YP_001435913.1| - 0.1 12.7 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA PF00004.29 gi|156938117|ref|YP_001435913.1| - 0.12 12.7 0.4 1.4 9.3 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 gi|156938117|ref|YP_001435913.1| - 0.13 12.7 0.1 0.34 11.3 0.1 1.9 1 1 0 1 1 1 0 RNA helicase AAA_24 PF13479.6 gi|156938117|ref|YP_001435913.1| - 0.13 11.9 0.1 0.32 10.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain Methyltr_RsmB-F PF01189.17 gi|156938118|ref|YP_001435914.1| - 1.3e-12 47.8 0.0 6.9e-11 42.2 0.0 2.1 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F TRAPP PF04051.16 gi|156938119|ref|YP_001435915.1| - 1.2e-07 31.6 0.0 1.5e-07 31.2 0.0 1.1 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component V4R PF02830.18 gi|156938119|ref|YP_001435915.1| - 0.00088 19.2 0.0 0.0025 17.8 0.0 1.7 2 0 0 2 2 2 1 V4R domain DUF3800 PF12686.7 gi|156938119|ref|YP_001435915.1| - 0.018 15.6 0.0 0.022 15.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3800) DUF2507 PF10702.9 gi|156938119|ref|YP_001435915.1| - 0.06 13.3 0.0 0.079 12.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2507) Aminotran_1_2 PF00155.21 gi|156938120|ref|YP_001435916.1| - 6.1e-39 134.2 0.0 7.7e-39 133.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DUF2812 PF11193.8 gi|156938120|ref|YP_001435916.1| - 0.027 14.7 0.1 0.069 13.4 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2812) DMRL_synthase PF00885.19 gi|156938121|ref|YP_001435917.1| - 7.1e-10 38.9 0.0 9.2e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase SPOUT_MTase_2 PF14419.6 gi|156938122|ref|YP_001435918.1| - 7.2e-66 220.8 1.0 1.4e-65 219.8 1.0 1.5 1 0 0 1 1 1 1 AF2226-like SPOUT RNA Methylase fused to THUMP THUMP PF02926.17 gi|156938122|ref|YP_001435918.1| - 7.6e-24 84.5 7.3 1e-22 80.8 2.5 3.0 3 0 0 3 3 3 1 THUMP domain DUF531 PF04407.12 gi|156938122|ref|YP_001435918.1| - 0.011 15.8 0.0 0.02 15.0 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF531) UPF0086 PF01868.16 gi|156938122|ref|YP_001435918.1| - 0.03 14.2 0.2 0.063 13.2 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function UPF0086 Trm56 PF01994.16 gi|156938122|ref|YP_001435918.1| - 0.12 12.3 0.0 0.24 11.3 0.0 1.4 1 0 0 1 1 1 0 tRNA ribose 2'-O-methyltransferase, aTrm56 BPD_transp_1 PF00528.22 gi|156938123|ref|YP_001435919.1| - 3e-36 124.9 19.2 3e-36 124.9 19.2 2.0 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF3042 PF11240.8 gi|156938123|ref|YP_001435919.1| - 0.037 14.0 1.5 1.3 9.1 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3042) Coa1 PF08695.10 gi|156938123|ref|YP_001435919.1| - 0.077 12.8 0.0 0.19 11.5 0.0 1.7 1 0 0 1 1 1 0 Cytochrome oxidase complex assembly protein 1 ARGLU PF15346.6 gi|156938123|ref|YP_001435919.1| - 0.53 10.2 2.9 0.73 9.7 2.9 1.1 1 0 0 1 1 1 0 Arginine and glutamate-rich 1 DUF2149 PF09919.9 gi|156938123|ref|YP_001435919.1| - 1.4 9.2 6.5 0.16 12.2 0.5 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2149) BPD_transp_1 PF00528.22 gi|156938124|ref|YP_001435920.1| - 1.2e-24 87.1 18.5 1.2e-24 87.1 10.9 2.3 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|156938125|ref|YP_001435921.1| - 1.1e-25 90.7 0.0 1.6e-25 90.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|156938125|ref|YP_001435921.1| - 4e-19 68.9 0.1 6.8e-19 68.2 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|156938125|ref|YP_001435921.1| - 3.2e-06 27.2 0.2 2.2e-05 24.4 0.0 2.0 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156938125|ref|YP_001435921.1| - 4.1e-05 23.1 0.0 9.5e-05 21.9 0.0 1.4 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain PRK PF00485.18 gi|156938125|ref|YP_001435921.1| - 0.0005 19.9 0.0 0.00073 19.3 0.0 1.2 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|156938125|ref|YP_001435921.1| - 0.051 13.9 0.0 0.084 13.3 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|156938125|ref|YP_001435921.1| - 0.088 12.6 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|156938125|ref|YP_001435921.1| - 0.13 12.7 0.1 1 9.8 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|156938125|ref|YP_001435921.1| - 0.19 11.7 0.0 0.41 10.5 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain ABC_tran PF00005.27 gi|156938126|ref|YP_001435922.1| - 3.2e-22 79.5 0.0 4.4e-22 79.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|156938126|ref|YP_001435922.1| - 1.7e-08 34.7 0.2 1.5e-05 24.9 0.1 2.1 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|156938126|ref|YP_001435922.1| - 2.3e-07 30.5 0.0 0.018 14.5 0.0 2.1 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|156938126|ref|YP_001435922.1| - 2.8e-05 24.7 0.0 5.6e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|156938126|ref|YP_001435922.1| - 5.8e-05 23.5 0.0 9.2e-05 22.9 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|156938126|ref|YP_001435922.1| - 0.00018 21.2 0.0 0.00035 20.2 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|156938126|ref|YP_001435922.1| - 0.0013 18.5 0.0 0.0021 17.9 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 gi|156938126|ref|YP_001435922.1| - 0.0019 18.1 0.1 0.0032 17.4 0.1 1.3 1 0 0 1 1 1 1 RsgA GTPase AAA PF00004.29 gi|156938126|ref|YP_001435922.1| - 0.016 15.6 0.1 0.033 14.6 0.1 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 gi|156938126|ref|YP_001435922.1| - 0.02 14.5 0.0 0.11 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|156938126|ref|YP_001435922.1| - 0.02 15.1 0.2 0.03 14.6 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|156938126|ref|YP_001435922.1| - 0.025 14.2 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|156938126|ref|YP_001435922.1| - 0.059 13.6 0.0 0.64 10.3 0.0 2.1 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_7 PF12775.7 gi|156938126|ref|YP_001435922.1| - 0.16 11.4 0.0 0.24 10.9 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_ATPase PF09818.9 gi|156938126|ref|YP_001435922.1| - 0.21 10.4 0.0 0.32 9.7 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class DUF2813 PF11398.8 gi|156938126|ref|YP_001435922.1| - 0.26 10.5 0.0 0.4 9.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2813) BPD_transp_1 PF00528.22 gi|156938127|ref|YP_001435923.1| - 1.5e-11 44.4 11.4 1.5e-11 44.4 11.4 1.7 1 1 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 gi|156938128|ref|YP_001435924.1| - 3e-29 102.4 0.0 3.4e-29 102.2 0.0 1.0 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Phosphonate-bd PF12974.7 gi|156938128|ref|YP_001435924.1| - 6.2e-07 29.3 0.0 7.9e-07 28.9 0.0 1.1 1 0 0 1 1 1 1 ABC transporter, phosphonate, periplasmic substrate-binding protein SBP_bac_1 PF01547.25 gi|156938128|ref|YP_001435924.1| - 3.4e-06 27.2 0.1 0.0078 16.2 0.1 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding protein SBP_bac_6 PF13343.6 gi|156938128|ref|YP_001435924.1| - 0.045 13.2 0.0 0.089 12.2 0.0 1.5 1 1 0 1 1 1 0 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|156938128|ref|YP_001435924.1| - 0.07 12.9 0.0 2.7 7.7 0.0 2.6 2 1 0 2 2 2 0 Bacterial extracellular solute-binding protein TFX_C PF14601.6 gi|156938129|ref|YP_001435925.1| - 4.4e-08 33.0 0.1 8.6e-08 32.0 0.1 1.5 2 0 0 2 2 2 1 DNA_binding protein, TFX, C-term UPF0122 PF04297.14 gi|156938129|ref|YP_001435925.1| - 7.1e-05 23.0 0.3 0.00014 22.0 0.1 1.7 2 1 0 2 2 1 1 Putative helix-turn-helix protein, YlxM / p13 like Sigma70_r4_2 PF08281.12 gi|156938129|ref|YP_001435925.1| - 0.00074 19.1 0.0 0.0012 18.4 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 Sigma70_r4 PF04545.16 gi|156938129|ref|YP_001435925.1| - 0.0061 16.1 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 TcdB_N PF12918.7 gi|156938129|ref|YP_001435925.1| - 0.025 14.8 0.3 0.059 13.7 0.0 1.7 2 0 0 2 2 2 0 TcdB toxin N-terminal helical domain MarR PF01047.22 gi|156938129|ref|YP_001435925.1| - 0.03 14.3 0.1 0.067 13.1 0.1 1.5 1 0 0 1 1 1 0 MarR family HTH_29 PF13551.6 gi|156938129|ref|YP_001435925.1| - 0.038 14.0 0.0 0.065 13.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix Terminase_5 PF06056.12 gi|156938129|ref|YP_001435925.1| - 0.042 13.7 0.0 0.069 13.0 0.0 1.4 1 0 0 1 1 1 0 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.6 gi|156938129|ref|YP_001435925.1| - 0.042 13.6 0.0 0.081 12.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2774 PF11242.8 gi|156938129|ref|YP_001435925.1| - 0.044 14.0 0.0 0.089 13.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) MarR_2 PF12802.7 gi|156938129|ref|YP_001435925.1| - 0.059 13.3 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_Crp_2 PF13545.6 gi|156938129|ref|YP_001435925.1| - 0.078 13.0 0.0 5.5 7.1 0.0 2.2 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_7 PF02796.15 gi|156938129|ref|YP_001435925.1| - 0.079 13.0 0.0 0.25 11.5 0.0 1.9 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_17 PF12728.7 gi|156938129|ref|YP_001435925.1| - 0.082 13.1 0.1 0.21 11.8 0.1 1.8 2 0 0 2 2 1 0 Helix-turn-helix domain GerE PF00196.19 gi|156938129|ref|YP_001435925.1| - 0.19 11.3 2.3 0.19 11.3 0.3 1.9 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HCV_core PF01542.18 gi|156938129|ref|YP_001435925.1| - 0.19 12.1 0.0 0.29 11.5 0.0 1.3 1 0 0 1 1 1 0 Hepatitis C virus core protein SNase PF00565.17 gi|156938130|ref|YP_001435926.1| - 0.001 19.6 0.0 0.0017 18.8 0.0 1.3 1 0 0 1 1 1 1 Staphylococcal nuclease homologue eRF1_2 PF03464.15 gi|156938131|ref|YP_001435927.1| - 6.1e-35 120.4 0.0 1.1e-34 119.7 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 2 acVLRF1 PF18859.1 gi|156938131|ref|YP_001435927.1| - 9.6e-17 61.5 2.3 5.9e-16 58.9 0.1 2.5 3 0 0 3 3 3 1 Actinobacteria/chloroflexi VLRF1 release factor eRF1_3 PF03465.15 gi|156938131|ref|YP_001435927.1| - 8.3e-15 55.3 0.9 1.6e-13 51.1 0.3 2.7 2 1 0 2 2 2 1 eRF1 domain 3 baeRF_family10 PF18854.1 gi|156938131|ref|YP_001435927.1| - 9.2e-12 45.4 1.7 1.2e-11 45.0 0.1 2.1 2 1 1 3 3 3 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|156938131|ref|YP_001435927.1| - 2.9e-05 24.1 0.0 4.2e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 1 YfdX PF10938.8 gi|156938131|ref|YP_001435927.1| - 0.056 13.4 2.4 0.91 9.5 0.2 2.5 2 0 0 2 2 2 0 YfdX protein SpoU_sub_bind PF08032.12 gi|156938131|ref|YP_001435927.1| - 0.086 13.1 0.2 0.59 10.5 0.0 2.5 2 1 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding DUF3209 PF11483.8 gi|156938131|ref|YP_001435927.1| - 0.46 11.0 2.8 3.4 8.2 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3209) GATase PF00117.28 gi|156938132|ref|YP_001435928.1| - 7.7e-30 104.1 0.0 9e-30 103.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|156938132|ref|YP_001435928.1| - 2.1e-10 40.7 0.0 4e-08 33.3 0.0 2.9 2 1 0 2 2 2 1 Peptidase C26 Ribosomal_L2_C PF03947.18 gi|156938133|ref|YP_001435929.1| - 1.5e-44 151.2 1.9 2.2e-44 150.7 1.9 1.2 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|156938133|ref|YP_001435929.1| - 9.9e-11 41.5 0.0 5.8e-10 39.0 0.0 2.2 2 0 0 2 2 2 1 Ribosomal Proteins L2, RNA binding domain DEAD PF00270.29 gi|156938134|ref|YP_001435930.1| - 2.1e-33 115.6 0.0 2.2e-32 112.2 0.0 2.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|156938134|ref|YP_001435930.1| - 1.5e-26 92.9 0.2 7.6e-24 84.2 0.2 2.6 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD_assoc PF08494.11 gi|156938134|ref|YP_001435930.1| - 4.9e-15 55.8 0.0 2.2e-14 53.7 0.1 2.0 2 0 0 2 2 2 1 DEAD/H associated ResIII PF04851.15 gi|156938134|ref|YP_001435930.1| - 2.4e-09 37.4 0.0 5.6e-09 36.2 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit HypA PF01155.19 gi|156938134|ref|YP_001435930.1| - 0.019 15.0 1.2 0.09 12.8 1.2 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AAA_22 PF13401.6 gi|156938134|ref|YP_001435930.1| - 0.043 14.1 1.0 0.63 10.3 1.0 2.6 1 1 0 1 1 1 0 AAA domain SNF2_N PF00176.23 gi|156938134|ref|YP_001435930.1| - 0.072 11.8 0.4 0.14 10.8 0.1 1.6 2 0 0 2 2 2 0 SNF2 family N-terminal domain AAA_25 PF13481.6 gi|156938134|ref|YP_001435930.1| - 0.12 11.9 0.0 0.43 10.1 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|156938134|ref|YP_001435930.1| - 0.12 12.7 0.3 0.9 9.9 0.3 2.5 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|156938134|ref|YP_001435930.1| - 0.44 10.2 1.9 18 5.0 0.0 3.1 3 1 0 3 3 3 0 AAA domain Desulfoferrodox PF01880.18 gi|156938135|ref|YP_001435931.1| - 4.4e-32 110.5 0.0 5.2e-32 110.3 0.0 1.0 1 0 0 1 1 1 1 Desulfoferrodoxin SoxY PF13501.6 gi|156938135|ref|YP_001435931.1| - 2.8e-09 37.2 0.0 3.6e-09 36.8 0.0 1.2 1 0 0 1 1 1 1 Sulfur oxidation protein SoxY DUF108 PF01958.18 gi|156938136|ref|YP_001435932.1| - 1e-32 112.3 1.7 2.1e-32 111.3 1.7 1.5 1 0 0 1 1 1 1 Domain of unknown function DUF108 NAD_binding_3 PF03447.16 gi|156938136|ref|YP_001435932.1| - 5.4e-14 52.9 0.1 3.3e-13 50.3 0.1 2.3 1 1 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|156938136|ref|YP_001435932.1| - 3.3e-06 27.3 0.1 0.00019 21.7 0.0 2.4 1 1 1 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase F420_oxidored PF03807.17 gi|156938136|ref|YP_001435932.1| - 1.8e-05 25.2 0.6 0.00099 19.7 0.0 2.9 1 1 2 3 3 3 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|156938136|ref|YP_001435932.1| - 3.5e-05 23.2 0.0 0.00011 21.6 0.0 1.8 1 1 1 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DapB_N PF01113.20 gi|156938136|ref|YP_001435932.1| - 0.0029 17.7 1.5 0.018 15.2 0.1 2.6 1 1 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.16 gi|156938136|ref|YP_001435932.1| - 0.0042 16.8 0.1 0.048 13.3 0.0 2.3 2 1 1 3 3 3 1 Ketopantoate reductase PanE/ApbA DUF4836 PF16120.5 gi|156938136|ref|YP_001435932.1| - 0.084 11.8 0.1 0.1 11.6 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4836) ThiF PF00899.21 gi|156938136|ref|YP_001435932.1| - 1.2 8.4 5.2 4.1 6.7 0.1 2.5 1 1 1 2 2 2 0 ThiF family QRPTase_C PF01729.19 gi|156938137|ref|YP_001435933.1| - 3.6e-46 157.0 0.1 4.6e-46 156.7 0.1 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|156938137|ref|YP_001435933.1| - 5.6e-06 26.3 0.0 1.6e-05 24.9 0.0 1.8 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain Ribul_P_3_epim PF00834.19 gi|156938137|ref|YP_001435933.1| - 0.08 12.3 0.0 0.15 11.5 0.0 1.5 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family MMPL PF03176.15 gi|156938138|ref|YP_001435934.1| - 8.2e-18 64.4 29.1 3.1e-11 42.8 6.9 2.4 2 0 0 2 2 2 2 MMPL family GCH_III PF05165.12 gi|156938139|ref|YP_001435935.1| - 2.9e-23 82.4 0.0 3.5e-13 49.4 0.0 2.1 1 1 1 2 2 2 2 GTP cyclohydrolase III R_equi_Vir PF05526.11 gi|156938139|ref|YP_001435935.1| - 0.19 11.6 0.0 0.28 11.0 0.0 1.3 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein DUF5591 PF17884.1 gi|156938140|ref|YP_001435936.1| - 5.5e-21 75.0 2.3 9.9e-21 74.2 2.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) Uteroglobin PF01099.17 gi|156938140|ref|YP_001435936.1| - 0.02 15.2 1.1 0.94 9.9 0.0 3.0 3 0 0 3 3 3 0 Uteroglobin family Siah-Interact_N PF09032.11 gi|156938140|ref|YP_001435936.1| - 0.059 13.7 0.3 0.13 12.6 0.3 1.6 1 0 0 1 1 1 0 Siah interacting protein, N terminal Sacchrp_dh_NADP PF03435.18 gi|156938140|ref|YP_001435936.1| - 0.16 12.2 0.0 0.43 10.9 0.0 1.7 2 0 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain Phage_Gp19 PF09355.10 gi|156938142|ref|YP_001435938.1| - 0.011 16.1 0.6 0.013 15.9 0.6 1.2 1 0 0 1 1 1 0 Phage protein Gp19/Gp15/Gp42 PmbA_TldD PF01523.16 gi|156938143|ref|YP_001435939.1| - 1e-42 146.9 0.5 3.8e-42 145.0 0.3 1.8 2 0 0 2 2 2 1 Putative modulator of DNA gyrase OMPdecase PF00215.24 gi|156938145|ref|YP_001435941.1| - 7.9e-21 74.7 0.0 1e-20 74.3 0.0 1.0 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family LdpA_C PF12617.8 gi|156938145|ref|YP_001435941.1| - 0.037 13.6 0.0 0.061 12.9 0.0 1.3 1 0 0 1 1 1 0 Iron-Sulfur binding protein C terminal Multi-haem_cyto PF13447.6 gi|156938146|ref|YP_001435942.1| - 3.6e-23 82.2 14.7 1.6e-18 67.0 1.6 4.2 4 0 0 4 4 4 2 Seven times multi-haem cytochrome CxxCH Cytochrome_C7 PF14522.6 gi|156938146|ref|YP_001435942.1| - 6.5e-12 45.3 13.9 0.00024 21.0 0.1 5.2 3 2 1 4 4 4 3 Cytochrome c7 and related cytochrome c Paired_CXXCH_1 PF09699.10 gi|156938146|ref|YP_001435942.1| - 3.2e-07 30.0 22.8 0.35 10.6 2.8 7.3 7 0 0 7 7 7 4 Doubled CXXCH motif (Paired_CXXCH_1) Cytochrom_c3_2 PF14537.6 gi|156938146|ref|YP_001435942.1| - 0.00022 21.6 26.1 0.024 15.1 2.6 5.7 3 2 1 4 4 4 3 Cytochrome c3 Cytochrome_C554 PF13435.6 gi|156938146|ref|YP_001435942.1| - 0.00047 21.0 28.7 0.0029 18.5 0.1 6.5 4 2 4 8 8 8 3 Cytochrome c554 and c-prime FixO PF02433.15 gi|156938146|ref|YP_001435942.1| - 0.7 9.3 4.2 0.88 9.0 0.0 3.0 2 1 1 3 3 3 0 Cytochrome C oxidase, mono-heme subunit/FixO Cytochrom_NNT PF03264.14 gi|156938146|ref|YP_001435942.1| - 0.87 9.3 0.0 0.87 9.3 0.0 5.6 5 1 1 6 6 6 0 NapC/NirT cytochrome c family, N-terminal region Cytochrom_CIII PF02085.16 gi|156938146|ref|YP_001435942.1| - 1.6 9.1 29.7 9.3 6.7 0.4 5.9 4 2 0 5 5 5 0 Class III cytochrome C family PAPS_reduct PF01507.19 gi|156938147|ref|YP_001435943.1| - 8.5e-35 120.3 0.0 2.2e-34 119.0 0.0 1.6 2 0 0 2 2 2 1 Phosphoadenosine phosphosulfate reductase family Fer4_21 PF14697.6 gi|156938147|ref|YP_001435943.1| - 5.9e-07 29.5 7.5 2.3e-06 27.7 7.6 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156938147|ref|YP_001435943.1| - 6.2e-07 29.5 7.5 1.4e-06 28.3 7.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|156938147|ref|YP_001435943.1| - 2.4e-06 28.0 8.0 5.7e-06 26.8 8.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156938147|ref|YP_001435943.1| - 7.4e-06 25.8 9.8 0.0079 16.2 1.8 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|156938147|ref|YP_001435943.1| - 9.7e-06 25.6 6.9 2.4e-05 24.4 6.9 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156938147|ref|YP_001435943.1| - 1.9e-05 24.3 10.4 0.021 14.6 1.0 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|156938147|ref|YP_001435943.1| - 2.2e-05 25.3 5.7 0.041 14.8 1.7 2.8 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|156938147|ref|YP_001435943.1| - 7.2e-05 23.2 4.1 0.15 12.6 0.3 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156938147|ref|YP_001435943.1| - 7.7e-05 23.1 2.5 0.3 11.6 0.0 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156938147|ref|YP_001435943.1| - 0.00046 20.1 11.7 0.11 12.7 1.7 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain NAD_synthase PF02540.17 gi|156938147|ref|YP_001435943.1| - 0.0077 15.4 0.0 0.013 14.6 0.0 1.3 1 0 0 1 1 1 1 NAD synthase GAF_2 PF13185.6 gi|156938147|ref|YP_001435943.1| - 0.12 12.7 0.1 0.62 10.4 0.0 2.3 3 0 0 3 3 2 0 GAF domain Fer4_22 PF17179.4 gi|156938147|ref|YP_001435943.1| - 0.16 12.8 3.2 1.7 9.5 0.2 2.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156938147|ref|YP_001435943.1| - 9.6 7.0 19.4 0.6 10.8 1.4 2.7 3 0 0 3 3 2 0 4Fe-4S binding domain ROK PF00480.20 gi|156938148|ref|YP_001435944.1| - 3.1e-40 138.5 0.0 4e-40 138.1 0.0 1.1 1 0 0 1 1 1 1 ROK family Glucokinase PF02685.16 gi|156938148|ref|YP_001435944.1| - 1.2e-05 24.5 0.0 5.2e-05 22.4 0.0 2.0 2 1 0 2 2 2 1 Glucokinase Pan_kinase PF03309.14 gi|156938148|ref|YP_001435944.1| - 0.076 12.8 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Type III pantothenate kinase DZR PF12773.7 gi|156938149|ref|YP_001435945.1| - 0.0067 16.4 0.1 0.013 15.5 0.1 1.4 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|156938149|ref|YP_001435945.1| - 0.0077 15.9 1.7 1.7 8.5 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|156938149|ref|YP_001435945.1| - 0.015 14.7 1.2 3 7.4 0.2 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|156938149|ref|YP_001435945.1| - 0.02 14.8 2.0 0.058 13.4 2.0 1.8 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|156938149|ref|YP_001435945.1| - 0.021 14.9 1.2 0.084 13.0 1.2 1.9 1 1 0 1 1 1 0 Zinc ribbon domain zf_UBZ PF18439.1 gi|156938149|ref|YP_001435945.1| - 0.033 13.8 0.7 8 6.2 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Cys_rich_CPXG PF14255.6 gi|156938149|ref|YP_001435945.1| - 0.056 13.3 2.2 2.1 8.3 0.3 2.2 2 0 0 2 2 2 0 Cysteine-rich CPXCG CpXC PF14353.6 gi|156938149|ref|YP_001435945.1| - 0.088 12.8 0.5 2.4 8.2 0.1 2.6 2 1 0 2 2 2 0 CpXC protein Zn_ribbon_recom PF13408.6 gi|156938149|ref|YP_001435945.1| - 0.1 13.1 0.4 0.21 12.1 0.4 1.5 1 0 0 1 1 1 0 Recombinase zinc beta ribbon domain ComX PF05952.12 gi|156938149|ref|YP_001435945.1| - 0.1 12.5 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Bacillus competence pheromone ComX HypA PF01155.19 gi|156938149|ref|YP_001435945.1| - 0.11 12.6 0.1 0.18 11.8 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_10 PF10058.9 gi|156938149|ref|YP_001435945.1| - 0.15 11.8 3.6 5.1 6.9 3.6 2.2 1 1 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein PhnA_Zn_Ribbon PF08274.12 gi|156938149|ref|YP_001435945.1| - 0.17 11.9 3.4 0.7 9.9 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon zinc_ribbon_4 PF13717.6 gi|156938149|ref|YP_001435945.1| - 0.18 11.8 2.5 12 5.9 0.1 2.7 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|156938149|ref|YP_001435945.1| - 0.19 11.2 1.5 6.1 6.4 0.2 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding TFIIS_C PF01096.18 gi|156938149|ref|YP_001435945.1| - 0.24 11.3 1.0 4.7 7.1 0.1 2.1 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) DUF2757 PF10955.8 gi|156938149|ref|YP_001435945.1| - 0.25 11.6 2.1 6.4 7.1 0.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF2757) Sgf11 PF08209.11 gi|156938149|ref|YP_001435945.1| - 0.47 10.1 3.2 4.6 6.9 0.2 2.3 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) Rubredoxin_2 PF18073.1 gi|156938149|ref|YP_001435945.1| - 0.58 9.9 5.6 1.4 8.7 0.5 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-CHY PF05495.12 gi|156938149|ref|YP_001435945.1| - 0.76 10.3 3.6 4.1 8.0 0.6 2.1 1 1 1 2 2 2 0 CHY zinc finger Ogr_Delta PF04606.12 gi|156938149|ref|YP_001435945.1| - 0.91 9.6 3.6 9.4 6.3 0.3 2.3 2 0 0 2 2 2 0 Ogr/Delta-like zinc finger ArsA_HSP20 PF17886.1 gi|156938150|ref|YP_001435946.1| - 1e-11 44.2 0.1 1.8e-11 43.4 0.1 1.4 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|156938150|ref|YP_001435946.1| - 1e-09 38.4 4.6 5.9e-08 32.8 4.6 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.16 gi|156938150|ref|YP_001435946.1| - 2.1e-05 25.5 0.3 3.4e-05 24.8 0.3 1.3 1 0 0 1 1 1 1 CS domain GvpH PF05455.11 gi|156938150|ref|YP_001435946.1| - 0.003 17.7 0.0 0.0062 16.6 0.0 1.4 1 1 0 1 1 1 1 GvpH PIH1_CS PF18201.1 gi|156938150|ref|YP_001435946.1| - 0.0031 17.9 0.1 0.0047 17.3 0.1 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain eIF-1a PF01176.19 gi|156938150|ref|YP_001435946.1| - 0.067 13.0 0.4 0.16 11.8 0.1 1.8 2 0 0 2 2 2 0 Translation initiation factor 1A / IF-1 TetR_N PF00440.23 gi|156938151|ref|YP_001435947.1| - 4.9e-17 61.4 0.0 7.9e-17 60.8 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family HTH_Tnp_1_2 PF13022.6 gi|156938151|ref|YP_001435947.1| - 0.0046 17.1 0.0 0.0071 16.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix of insertion element transposase LacI PF00356.21 gi|156938151|ref|YP_001435947.1| - 0.0079 16.0 0.2 1.3 8.9 0.1 2.5 2 0 0 2 2 2 2 Bacterial regulatory proteins, lacI family HAD_2 PF13419.6 gi|156938151|ref|YP_001435947.1| - 0.06 13.4 0.0 0.17 12.0 0.0 1.7 1 1 1 2 2 2 0 Haloacid dehalogenase-like hydrolase HTH_23 PF13384.6 gi|156938151|ref|YP_001435947.1| - 0.1 12.4 0.0 0.2 11.5 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain MMR_HSR1_C PF08438.10 gi|156938152|ref|YP_001435948.1| - 1.8e-34 118.7 0.1 3.2e-34 117.9 0.1 1.4 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|156938152|ref|YP_001435948.1| - 2.2e-19 69.6 0.0 2.9e-18 66.0 0.0 2.8 2 2 0 2 2 2 1 50S ribosome-binding GTPase TGS PF02824.21 gi|156938152|ref|YP_001435948.1| - 2.3e-09 37.1 0.0 4.2e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|156938152|ref|YP_001435948.1| - 0.0002 20.9 0.1 0.00092 18.8 0.1 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.13 gi|156938152|ref|YP_001435948.1| - 0.0013 18.8 0.2 0.0063 16.7 0.0 2.2 2 1 1 3 3 3 1 Protein of unknown function (DUF933) LexA_DNA_bind PF01726.16 gi|156938152|ref|YP_001435948.1| - 0.008 15.9 0.5 0.23 11.3 0.1 2.8 3 0 0 3 3 3 1 LexA DNA binding domain NiFe_hyd_SSU_C PF14720.6 gi|156938153|ref|YP_001435949.1| - 2e-24 85.7 0.8 3.6e-24 84.9 0.8 1.5 1 0 0 1 1 1 1 NiFe/NiFeSe hydrogenase small subunit C-terminal Oxidored_q6 PF01058.22 gi|156938153|ref|YP_001435949.1| - 1.9e-19 69.8 0.0 4.8e-19 68.5 0.0 1.7 1 1 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit NiFeSe_Hases PF00374.19 gi|156938154|ref|YP_001435950.1| - 5e-48 164.2 1.3 4.4e-23 82.0 0.1 3.5 2 1 0 3 3 3 3 Nickel-dependent hydrogenase Fer4_17 PF13534.6 gi|156938156|ref|YP_001435952.1| - 7.7e-08 32.8 15.3 3.3e-06 27.5 6.0 2.7 3 1 1 4 4 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156938156|ref|YP_001435952.1| - 1.2e-07 31.8 3.1 5.6e-07 29.6 1.9 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156938156|ref|YP_001435952.1| - 1.4e-07 31.8 2.8 1.4e-07 31.8 2.8 2.0 2 1 0 2 2 1 1 4Fe-4S dicluster domain CCG PF02754.16 gi|156938156|ref|YP_001435952.1| - 4.9e-07 29.9 10.8 3.9e-05 23.8 0.1 4.0 5 0 0 5 5 5 2 Cysteine-rich domain Fer4_7 PF12838.7 gi|156938156|ref|YP_001435952.1| - 7.9e-07 29.6 14.5 5.8e-06 26.8 6.4 2.2 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156938156|ref|YP_001435952.1| - 3.8e-05 23.8 8.2 0.00038 20.6 7.8 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|156938156|ref|YP_001435952.1| - 0.002 18.9 5.0 0.73 10.7 0.2 3.4 3 0 0 3 3 3 1 4Fe-4S dicluster domain HTH_56 PF18662.1 gi|156938156|ref|YP_001435952.1| - 0.0028 17.7 0.1 0.0071 16.4 0.1 1.6 1 0 0 1 1 1 1 Cch helix turn helix domain Fer4_2 PF12797.7 gi|156938156|ref|YP_001435952.1| - 0.0031 17.5 2.9 0.0031 17.5 2.9 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156938156|ref|YP_001435952.1| - 0.0039 17.3 10.4 0.057 13.6 0.7 2.9 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156938156|ref|YP_001435952.1| - 0.0042 16.9 13.8 0.0067 16.2 2.3 2.6 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 gi|156938156|ref|YP_001435952.1| - 0.0054 16.9 2.7 0.71 10.1 0.1 3.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156938156|ref|YP_001435952.1| - 0.21 12.2 16.1 0.71 10.5 2.0 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|156938156|ref|YP_001435952.1| - 0.94 10.5 12.3 2.8 8.9 10.5 2.7 2 1 2 4 4 4 0 4Fe-4S double cluster binding domain Peptidase_M54 PF07998.11 gi|156938157|ref|YP_001435953.1| - 1.3e-30 106.9 0.0 2.4e-30 106.0 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M54 Metallopep PF12044.8 gi|156938157|ref|YP_001435953.1| - 0.00076 18.2 0.1 0.00096 17.9 0.1 1.1 1 0 0 1 1 1 1 Putative peptidase family Peptidase_M10 PF00413.24 gi|156938157|ref|YP_001435953.1| - 0.0014 18.5 0.0 0.0016 18.3 0.0 1.1 1 0 0 1 1 1 1 Matrixin Peptidase_M66 PF10462.9 gi|156938157|ref|YP_001435953.1| - 0.049 12.6 0.0 0.067 12.1 0.0 1.1 1 0 0 1 1 1 0 Peptidase M66 Zincin_1 PF06262.11 gi|156938157|ref|YP_001435953.1| - 0.079 13.1 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Zincin-like metallopeptidase Peptidase_M43 PF05572.13 gi|156938157|ref|YP_001435953.1| - 0.089 12.7 0.0 0.11 12.4 0.0 1.3 1 1 0 1 1 1 0 Pregnancy-associated plasma protein-A Reprolysin_3 PF13582.6 gi|156938157|ref|YP_001435953.1| - 0.11 13.1 0.0 0.12 12.9 0.0 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like DUF4953 PF16313.5 gi|156938157|ref|YP_001435953.1| - 0.13 11.5 0.1 0.22 10.7 0.1 1.3 1 0 0 1 1 1 0 Met-zincin Arginase PF00491.21 gi|156938158|ref|YP_001435954.1| - 9.3e-52 176.3 0.0 2.2e-51 175.0 0.0 1.5 1 1 0 1 1 1 1 Arginase family TFIIB PF00382.19 gi|156938159|ref|YP_001435955.1| - 1.2e-35 121.3 3.1 6.8e-18 64.5 0.5 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|156938159|ref|YP_001435955.1| - 1.2e-17 63.2 1.1 2e-17 62.4 1.1 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding zf-RRN7 PF11781.8 gi|156938159|ref|YP_001435955.1| - 5.5e-08 32.4 1.1 8.3e-08 31.8 1.1 1.3 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Sigma70_r4 PF04545.16 gi|156938159|ref|YP_001435955.1| - 2.1e-07 30.3 4.5 7.3e-05 22.2 0.2 3.1 3 0 0 3 3 3 2 Sigma-70, region 4 HTH_AsnC-type PF13404.6 gi|156938159|ref|YP_001435955.1| - 3.1e-05 23.7 0.0 0.0027 17.5 0.0 2.6 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|156938159|ref|YP_001435955.1| - 0.00019 21.3 0.1 0.51 10.3 0.1 2.7 2 0 0 2 2 2 2 HTH domain RB_B PF01857.20 gi|156938159|ref|YP_001435955.1| - 0.00043 20.3 0.1 0.0013 18.7 0.3 1.8 2 0 0 2 2 1 1 Retinoblastoma-associated protein B domain Cyclin_C PF02984.19 gi|156938159|ref|YP_001435955.1| - 0.0005 20.1 0.0 0.3 11.2 0.0 2.2 2 0 0 2 2 2 1 Cyclin, C-terminal domain Sigma70_r4_2 PF08281.12 gi|156938159|ref|YP_001435955.1| - 0.00061 19.4 0.4 0.031 14.0 0.1 2.9 2 1 0 2 2 2 1 Sigma-70, region 4 Ribosomal_S27e PF01667.17 gi|156938159|ref|YP_001435955.1| - 0.0016 18.1 0.3 0.0029 17.3 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S27 UPF0253 PF06786.12 gi|156938159|ref|YP_001435955.1| - 0.0026 18.0 1.0 0.029 14.6 0.1 2.8 3 0 0 3 3 3 1 Uncharacterised protein family (UPF0253) Phage_TAC_12 PF12363.8 gi|156938159|ref|YP_001435955.1| - 0.0078 16.6 0.4 4.5 7.7 0.0 2.3 2 0 0 2 2 2 1 Phage tail assembly chaperone protein, TAC Zn_Tnp_IS1595 PF12760.7 gi|156938159|ref|YP_001435955.1| - 0.0095 15.9 0.6 0.02 14.9 0.6 1.5 1 0 0 1 1 1 1 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|156938159|ref|YP_001435955.1| - 0.015 15.7 0.2 0.033 14.6 0.2 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar Rrf2 PF02082.20 gi|156938159|ref|YP_001435955.1| - 0.018 15.4 0.4 5.4 7.4 0.0 2.5 2 0 0 2 2 2 0 Transcriptional regulator OrfB_Zn_ribbon PF07282.11 gi|156938159|ref|YP_001435955.1| - 0.018 15.0 0.2 0.046 13.7 0.2 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain GerE PF00196.19 gi|156938159|ref|YP_001435955.1| - 0.026 14.1 0.4 0.23 11.0 0.1 2.5 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family A2L_zn_ribbon PF08792.10 gi|156938159|ref|YP_001435955.1| - 0.036 13.8 0.7 0.072 12.8 0.7 1.5 1 1 0 1 1 1 0 A2L zinc ribbon domain DUF3562 PF12085.8 gi|156938159|ref|YP_001435955.1| - 0.05 13.2 0.1 4 7.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3562) HTH_Tnp_ISL3 PF13542.6 gi|156938159|ref|YP_001435955.1| - 0.058 12.8 0.0 1.2 8.6 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 PADR1 PF08063.12 gi|156938159|ref|YP_001435955.1| - 0.077 12.8 0.8 0.15 11.9 0.8 1.3 1 0 0 1 1 1 0 PADR1 (NUC008) domain HRDC PF00570.23 gi|156938159|ref|YP_001435955.1| - 0.083 12.9 2.2 8.4 6.5 0.0 2.8 3 0 0 3 3 3 0 HRDC domain TFIIB_C_1 PF18542.1 gi|156938159|ref|YP_001435955.1| - 0.083 12.9 4.3 0.086 12.9 1.3 2.3 1 1 2 3 3 3 0 Transcription factor IIB C-terminal module 1 TrmB PF01978.19 gi|156938159|ref|YP_001435955.1| - 0.14 12.1 1.9 12 5.9 0.0 2.7 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Zn-ribbon_8 PF09723.10 gi|156938159|ref|YP_001435955.1| - 0.17 12.0 0.7 26 5.1 0.1 2.4 2 0 0 2 2 2 0 Zinc ribbon domain Prim_Zn_Ribbon PF08273.12 gi|156938159|ref|YP_001435955.1| - 0.29 11.5 3.3 0.84 10.0 3.3 1.7 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase Auto_anti-p27 PF06677.12 gi|156938159|ref|YP_001435955.1| - 0.31 11.2 1.2 0.62 10.3 1.2 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Nudix_N_2 PF14803.6 gi|156938159|ref|YP_001435955.1| - 0.98 9.4 5.6 18 5.4 0.4 2.8 1 1 1 2 2 2 0 Nudix N-terminal AGOG PF09171.10 gi|156938160|ref|YP_001435956.1| - 4.1e-55 186.8 0.0 5.1e-55 186.5 0.0 1.0 1 0 0 1 1 1 1 N-glycosylase/DNA lyase Nif11 PF07862.11 gi|156938160|ref|YP_001435956.1| - 0.11 12.8 4.1 1.5 9.2 0.0 3.8 5 0 0 5 5 5 0 Nif11 domain Pox_A3L PF05288.11 gi|156938160|ref|YP_001435956.1| - 0.15 12.0 1.9 0.19 11.7 0.4 1.9 2 0 0 2 2 2 0 Poxvirus A3L Protein PhosphMutase PF10143.9 gi|156938161|ref|YP_001435957.1| - 1.5e-57 194.2 0.0 2.7e-57 193.3 0.0 1.4 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|156938161|ref|YP_001435957.1| - 5.4e-39 134.1 0.0 6.2e-39 133.8 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Alk_phosphatase PF00245.20 gi|156938161|ref|YP_001435957.1| - 0.18 10.7 3.8 0.4 9.6 0.2 2.5 2 1 0 2 2 2 0 Alkaline phosphatase Ribosomal_L12_N PF16320.5 gi|156938161|ref|YP_001435957.1| - 1.2 8.9 5.9 3.2 7.5 0.4 2.6 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain CBS PF00571.28 gi|156938162|ref|YP_001435958.1| - 5.3e-07 30.0 5.1 0.14 12.6 0.0 4.2 4 0 0 4 4 4 3 CBS domain Mut7-C PF01927.16 gi|156938163|ref|YP_001435959.1| - 1.2e-27 96.8 0.6 3.8e-26 91.9 0.6 2.0 1 1 0 1 1 1 1 Mut7-C RNAse domain Zn_Tnp_IS1595 PF12760.7 gi|156938163|ref|YP_001435959.1| - 0.042 13.8 0.7 0.11 12.5 0.7 1.6 1 0 0 1 1 1 0 Transposase zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|156938163|ref|YP_001435959.1| - 0.075 12.8 0.8 6.2 6.7 0.1 2.4 2 0 0 2 2 2 0 A2L zinc ribbon domain Zn_ribbon_recom PF13408.6 gi|156938163|ref|YP_001435959.1| - 0.98 10.0 4.8 2 9.0 2.2 2.4 2 1 1 3 3 3 0 Recombinase zinc beta ribbon domain Fer4_5 PF12801.7 gi|156938164|ref|YP_001435960.1| - 5.4e-13 48.7 17.6 3e-09 36.7 0.6 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4 PF00037.27 gi|156938164|ref|YP_001435960.1| - 7e-12 44.6 18.5 2.6e-06 27.0 2.1 4.1 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156938164|ref|YP_001435960.1| - 2e-11 44.3 9.8 1.6e-05 25.4 1.5 3.0 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|156938164|ref|YP_001435960.1| - 3.4e-08 33.5 9.2 3.4e-08 33.5 9.2 2.1 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156938164|ref|YP_001435960.1| - 9.1e-08 32.1 23.1 2.6e-06 27.4 12.6 3.4 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156938164|ref|YP_001435960.1| - 1.2e-07 32.6 13.5 0.00018 22.4 0.7 3.7 3 1 2 5 5 5 3 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|156938164|ref|YP_001435960.1| - 6.6e-07 29.8 13.6 0.00097 19.6 3.9 3.3 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156938164|ref|YP_001435960.1| - 2.2e-05 24.3 21.0 0.0018 18.3 2.1 3.5 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|156938164|ref|YP_001435960.1| - 4.1e-05 23.6 17.3 0.00096 19.2 12.2 3.5 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|156938164|ref|YP_001435960.1| - 7.6e-05 23.1 15.0 0.012 16.0 0.8 3.1 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|156938164|ref|YP_001435960.1| - 0.00027 21.1 16.2 0.0091 16.2 2.2 3.3 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|156938164|ref|YP_001435960.1| - 0.00034 20.5 11.4 0.0023 17.9 2.3 3.8 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|156938164|ref|YP_001435960.1| - 0.012 16.1 21.9 0.012 16.0 5.2 2.9 3 0 0 3 3 2 0 4Fe-4S binding domain Ni_hydr_CYTB PF01292.20 gi|156938164|ref|YP_001435960.1| - 0.049 13.2 0.3 0.049 13.2 0.3 2.0 1 1 0 2 2 2 0 Prokaryotic cytochrome b561 Fer4_3 PF12798.7 gi|156938164|ref|YP_001435960.1| - 0.075 14.0 5.3 0.075 14.0 5.3 4.1 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|156938164|ref|YP_001435960.1| - 0.17 12.4 11.3 2.6 8.7 1.4 2.9 3 0 0 3 3 3 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_22 PF17179.4 gi|156938164|ref|YP_001435960.1| - 6.2 7.7 17.8 0.68 10.8 2.9 2.9 2 1 3 5 5 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|156938165|ref|YP_001435961.1| - 1.1e-14 54.3 15.7 9.8e-08 32.0 3.6 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|156938165|ref|YP_001435961.1| - 1.1e-14 53.5 33.8 0.00027 20.6 1.6 5.3 5 0 0 5 5 5 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|156938165|ref|YP_001435961.1| - 7.8e-13 48.8 45.0 2.3e-06 28.1 7.9 3.4 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|156938165|ref|YP_001435961.1| - 1.2e-12 47.3 31.2 0.0033 17.4 4.0 4.5 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_8 PF13183.6 gi|156938165|ref|YP_001435961.1| - 2.1e-12 47.3 17.8 8.6e-07 29.3 7.2 3.5 3 0 0 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|156938165|ref|YP_001435961.1| - 4e-11 43.7 20.9 0.00075 20.4 1.4 4.9 5 0 0 5 5 5 4 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|156938165|ref|YP_001435961.1| - 8.8e-10 38.6 26.4 0.0022 18.1 10.6 3.6 2 1 2 4 4 4 4 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|156938165|ref|YP_001435961.1| - 2.2e-09 37.3 28.4 5.7e-05 23.1 7.7 3.8 1 1 3 4 4 4 4 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|156938165|ref|YP_001435961.1| - 2.4e-09 37.0 29.9 0.00052 20.3 1.3 4.5 4 0 0 4 4 4 4 4Fe-4S binding domain Fer4_2 PF12797.7 gi|156938165|ref|YP_001435961.1| - 1.2e-08 34.5 36.2 0.003 17.5 1.8 4.7 4 1 0 4 4 4 4 4Fe-4S binding domain Fer4_3 PF12798.7 gi|156938165|ref|YP_001435961.1| - 0.00029 21.5 42.4 0.0095 16.8 7.0 4.4 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|156938165|ref|YP_001435961.1| - 0.0074 16.8 32.2 0.25 11.9 3.1 4.4 2 2 1 4 4 4 3 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|156938165|ref|YP_001435961.1| - 0.21 11.8 19.8 2.5 8.3 0.1 4.3 3 1 1 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|156938165|ref|YP_001435961.1| - 0.7 10.7 15.1 0.59 10.9 0.3 4.2 4 0 0 4 4 4 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|156938165|ref|YP_001435961.1| - 4.8 8.1 26.0 3.2 8.7 3.3 4.2 3 1 1 4 4 4 0 4Fe-4S dicluster domain Molybdopterin PF00384.22 gi|156938166|ref|YP_001435962.1| - 1.6e-43 149.3 0.0 4.4e-43 147.8 0.0 1.8 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|156938166|ref|YP_001435962.1| - 4.9e-20 71.6 0.0 1.2e-19 70.4 0.0 1.7 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|156938166|ref|YP_001435962.1| - 1.9e-06 27.8 0.7 8.2e-06 25.7 0.4 2.1 2 0 0 2 2 2 1 Molybdopterin oxidoreductase Fe4S4 domain TAT_signal PF10518.9 gi|156938166|ref|YP_001435962.1| - 1.1 9.2 6.8 2 8.4 6.8 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence NapD PF03927.13 gi|156938167|ref|YP_001435963.1| - 0.0046 17.0 0.0 0.0082 16.2 0.0 1.3 1 0 0 1 1 1 1 NapD protein AsnC_trans_reg PF01037.21 gi|156938167|ref|YP_001435963.1| - 0.015 15.2 0.0 0.032 14.2 0.0 1.6 1 1 0 1 1 1 0 Lrp/AsnC ligand binding domain LytR_C PF13399.6 gi|156938167|ref|YP_001435963.1| - 0.12 13.3 0.0 0.19 12.7 0.0 1.5 1 1 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator DUF2129 PF09902.9 gi|156938167|ref|YP_001435963.1| - 0.17 12.0 0.0 0.26 11.4 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2129) FlgD_ig PF13860.6 gi|156938168|ref|YP_001435964.1| - 0.072 13.0 0.0 0.2 11.5 0.0 1.7 2 0 0 2 2 2 0 FlgD Ig-like domain Radical_SAM PF04055.21 gi|156938169|ref|YP_001435965.1| - 9.3e-08 32.6 0.2 4.7e-07 30.3 0.1 2.3 2 1 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|156938169|ref|YP_001435965.1| - 0.00037 20.6 0.0 0.00099 19.2 0.0 1.7 1 1 0 1 1 1 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|156938169|ref|YP_001435965.1| - 0.002 18.4 0.0 0.0067 16.7 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain AsnC_trans_reg PF01037.21 gi|156938169|ref|YP_001435965.1| - 0.026 14.5 0.0 14 5.7 0.0 3.1 2 1 0 2 2 2 0 Lrp/AsnC ligand binding domain Imm-NTF2 PF15655.6 gi|156938169|ref|YP_001435965.1| - 0.053 13.8 0.2 0.12 12.6 0.0 1.7 2 0 0 2 2 2 0 NTF2 fold immunity protein GTP_EFTU PF00009.27 gi|156938170|ref|YP_001435966.1| - 1.4e-62 210.7 0.0 2.1e-62 210.2 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|156938170|ref|YP_001435966.1| - 4.3e-29 100.7 0.3 4.1e-27 94.4 0.0 3.0 2 1 1 3 3 3 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|156938170|ref|YP_001435966.1| - 2.6e-24 85.1 0.1 7.6e-24 83.6 0.1 1.9 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|156938170|ref|YP_001435966.1| - 8.5e-23 80.2 0.0 2.6e-22 78.7 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|156938170|ref|YP_001435966.1| - 2.8e-11 43.6 0.1 8.4e-11 42.1 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|156938170|ref|YP_001435966.1| - 0.00023 21.2 0.0 0.00063 19.8 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Cadherin_2 PF08266.12 gi|156938170|ref|YP_001435966.1| - 0.098 12.5 0.1 0.37 10.6 0.0 2.0 2 0 0 2 2 2 0 Cadherin-like RF3_C PF16658.5 gi|156938170|ref|YP_001435966.1| - 0.11 12.3 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain REC1 PF18501.1 gi|156938170|ref|YP_001435966.1| - 0.23 11.3 0.0 2.2 8.1 0.0 2.1 2 0 0 2 2 2 0 Alpha helical recognition lobe domain GAT PF03127.14 gi|156938170|ref|YP_001435966.1| - 0.34 11.3 1.2 2.8 8.3 0.2 2.6 3 0 0 3 3 3 0 GAT domain SMC_N PF02463.19 gi|156938172|ref|YP_001435968.1| - 6.6e-23 81.3 23.0 4.8e-22 78.5 23.0 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|156938172|ref|YP_001435968.1| - 1e-21 78.4 3.5 1e-21 78.4 3.5 6.6 1 1 4 5 5 2 1 AAA domain AAA_15 PF13175.6 gi|156938172|ref|YP_001435968.1| - 5.4e-20 72.4 10.7 1.6e-13 51.1 0.0 3.3 2 2 0 2 2 2 2 AAA ATPase domain Rad50_zn_hook PF04423.14 gi|156938172|ref|YP_001435968.1| - 3.3e-11 42.8 0.1 3.3e-11 42.8 0.1 8.4 10 1 1 11 11 6 1 Rad50 zinc hook motif AAA_21 PF13304.6 gi|156938172|ref|YP_001435968.1| - 2.6e-09 37.3 4.4 0.0005 20.0 0.1 3.0 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|156938172|ref|YP_001435968.1| - 6.3e-08 32.2 0.0 1.3e-07 31.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|156938172|ref|YP_001435968.1| - 4.2e-07 29.0 62.9 5.1e-05 22.2 23.2 5.7 2 1 2 5 5 5 1 AAA domain ABC_tran PF00005.27 gi|156938172|ref|YP_001435968.1| - 4.6e-06 27.2 13.1 0.0037 17.8 0.0 4.9 2 1 1 3 3 3 2 ABC transporter SbcCD_C PF13558.6 gi|156938172|ref|YP_001435968.1| - 7.3e-05 22.9 0.0 0.00035 20.7 0.0 2.2 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit DUF1664 PF07889.12 gi|156938172|ref|YP_001435968.1| - 0.00058 19.9 52.4 0.17 11.9 5.1 7.9 2 2 5 8 8 8 4 Protein of unknown function (DUF1664) GAS PF13851.6 gi|156938172|ref|YP_001435968.1| - 0.00074 18.9 16.9 0.00074 18.9 16.9 6.6 2 2 3 6 6 6 3 Growth-arrest specific micro-tubule binding NPV_P10 PF05531.12 gi|156938172|ref|YP_001435968.1| - 0.00081 19.8 29.2 6.5 7.3 1.6 8.3 4 2 1 6 6 6 0 Nucleopolyhedrovirus P10 protein ERM PF00769.19 gi|156938172|ref|YP_001435968.1| - 0.0011 18.9 20.1 0.0011 18.9 20.1 4.9 2 2 1 4 4 4 2 Ezrin/radixin/moesin family AAA_27 PF13514.6 gi|156938172|ref|YP_001435968.1| - 0.0021 17.7 0.0 0.0021 17.7 0.0 5.7 4 1 1 6 6 6 1 AAA domain Spc7 PF08317.11 gi|156938172|ref|YP_001435968.1| - 0.0023 16.9 100.5 0.068 12.0 20.5 5.1 2 2 3 5 5 5 3 Spc7 kinetochore protein DUF4201 PF13870.6 gi|156938172|ref|YP_001435968.1| - 0.0039 16.9 12.8 0.0039 16.9 12.8 6.7 3 2 2 6 6 6 1 Domain of unknown function (DUF4201) Sec8_exocyst PF04048.14 gi|156938172|ref|YP_001435968.1| - 0.0044 16.9 4.0 0.0044 16.9 4.0 6.6 5 2 2 7 7 7 1 Sec8 exocyst complex component specific domain Baculo_PEP_C PF04513.12 gi|156938172|ref|YP_001435968.1| - 0.0063 16.6 30.7 3.2 7.8 4.4 6.8 2 2 6 8 8 8 2 Baculovirus polyhedron envelope protein, PEP, C terminus AAA_24 PF13479.6 gi|156938172|ref|YP_001435968.1| - 0.0065 16.2 1.8 5.7 6.6 0.0 3.7 3 1 1 4 4 4 0 AAA domain HrpB7 PF09486.10 gi|156938172|ref|YP_001435968.1| - 0.0094 16.4 16.0 0.0094 16.4 16.0 6.3 2 2 4 6 6 5 1 Bacterial type III secretion protein (HrpB7) RsgA_GTPase PF03193.16 gi|156938172|ref|YP_001435968.1| - 0.019 14.8 4.3 0.021 14.7 0.0 3.2 3 0 0 3 3 2 0 RsgA GTPase AAA_33 PF13671.6 gi|156938172|ref|YP_001435968.1| - 0.04 14.1 2.0 0.085 13.0 0.0 2.7 2 0 0 2 2 1 0 AAA domain AAA_16 PF13191.6 gi|156938172|ref|YP_001435968.1| - 0.041 14.3 0.0 0.041 14.3 0.0 4.9 2 1 2 4 4 3 0 AAA ATPase domain HsbA PF12296.8 gi|156938172|ref|YP_001435968.1| - 0.042 14.3 0.2 0.95 9.9 0.1 3.2 4 0 0 4 4 2 0 Hydrophobic surface binding protein A DUF3584 PF12128.8 gi|156938172|ref|YP_001435968.1| - 0.086 10.4 72.5 0.28 8.6 25.0 4.0 1 1 2 3 3 3 0 Protein of unknown function (DUF3584) DUF948 PF06103.11 gi|156938172|ref|YP_001435968.1| - 0.095 13.0 25.1 1.8 8.9 0.5 6.8 4 3 1 5 5 5 0 Bacterial protein of unknown function (DUF948) RNA_helicase PF00910.22 gi|156938172|ref|YP_001435968.1| - 0.16 12.4 0.1 0.49 10.8 0.0 1.9 2 0 0 2 2 1 0 RNA helicase DNA_ligase_ZBD PF03119.16 gi|156938172|ref|YP_001435968.1| - 0.21 11.7 0.3 0.62 10.1 0.3 1.9 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Syntaxin-6_N PF09177.11 gi|156938172|ref|YP_001435968.1| - 0.44 11.1 66.0 0.99 10.0 5.9 7.7 2 2 5 7 7 7 0 Syntaxin 6, N-terminal AAA PF00004.29 gi|156938172|ref|YP_001435968.1| - 0.55 10.7 0.0 0.55 10.7 0.0 4.0 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) ADIP PF11559.8 gi|156938172|ref|YP_001435968.1| - 0.68 10.0 84.5 0.087 12.9 10.1 7.3 3 2 4 7 7 6 0 Afadin- and alpha -actinin-Binding AAA_22 PF13401.6 gi|156938172|ref|YP_001435968.1| - 0.79 10.0 0.0 0.79 10.0 0.0 5.4 5 2 1 6 6 5 0 AAA domain MetOD1 PF18546.1 gi|156938172|ref|YP_001435968.1| - 1 9.3 0.0 1 9.3 0.0 3.4 3 0 0 3 3 3 0 Metanogen output domain 1 SHE3 PF17078.5 gi|156938172|ref|YP_001435968.1| - 1.2 8.8 83.3 0.12 12.1 10.8 5.1 2 2 2 4 4 4 0 SWI5-dependent HO expression protein 3 AAA_5 PF07728.14 gi|156938172|ref|YP_001435968.1| - 1.3 9.0 9.2 1.7 8.6 0.0 3.9 4 0 0 4 4 3 0 AAA domain (dynein-related subfamily) DUF3450 PF11932.8 gi|156938172|ref|YP_001435968.1| - 1.4 8.2 73.4 0.099 11.9 7.8 6.6 2 2 5 7 7 6 0 Protein of unknown function (DUF3450) AAA_25 PF13481.6 gi|156938172|ref|YP_001435968.1| - 1.4 8.4 0.0 1.4 8.4 0.0 4.2 4 1 1 5 5 5 0 AAA domain KASH_CCD PF14662.6 gi|156938172|ref|YP_001435968.1| - 1.9 8.3 104.5 0.011 15.6 31.9 4.9 3 1 2 5 5 5 0 Coiled-coil region of CCDC155 or KASH FlaC_arch PF05377.11 gi|156938172|ref|YP_001435968.1| - 2.4 8.6 64.1 0.1 13.0 3.4 11.0 5 4 5 10 10 10 0 Flagella accessory protein C (FlaC) APG6_N PF17675.1 gi|156938172|ref|YP_001435968.1| - 3.9 8.0 123.0 0.28 11.7 8.0 7.7 1 1 4 6 6 5 0 Apg6 coiled-coil region Sec34 PF04136.15 gi|156938172|ref|YP_001435968.1| - 6.6 6.6 44.7 0.32 10.9 4.7 6.8 4 2 1 7 7 7 0 Sec34-like family LPP PF04728.13 gi|156938172|ref|YP_001435968.1| - 7.2 7.1 15.5 23 5.5 0.0 6.7 6 3 0 6 6 5 0 Lipoprotein leucine-zipper TMPIT PF07851.13 gi|156938172|ref|YP_001435968.1| - 7.5 5.7 56.0 0.55 9.4 6.1 5.7 3 2 0 4 4 4 0 TMPIT-like protein CENP-B_N PF04218.13 gi|156938173|ref|YP_001435969.1| - 0.004 16.7 0.0 0.0086 15.7 0.0 1.5 1 0 0 1 1 1 1 CENP-B N-terminal DNA-binding domain HTH_28 PF13518.6 gi|156938173|ref|YP_001435969.1| - 0.0068 16.5 0.1 0.031 14.4 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|156938173|ref|YP_001435969.1| - 0.013 15.0 0.1 0.5 9.9 0.1 2.5 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|156938173|ref|YP_001435969.1| - 0.019 14.8 0.1 0.044 13.6 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain GerE PF00196.19 gi|156938173|ref|YP_001435969.1| - 0.03 13.9 0.0 0.75 9.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family PapB PF03333.13 gi|156938173|ref|YP_001435969.1| - 0.068 13.2 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Adhesin biosynthesis transcription regulatory protein DSHCT PF08148.12 gi|156938173|ref|YP_001435969.1| - 0.098 12.3 0.0 2.4 7.8 0.0 2.2 2 0 0 2 2 2 0 DSHCT (NUC185) domain OTCace PF00185.24 gi|156938174|ref|YP_001435970.1| - 1.2e-56 191.1 0.0 2.4e-56 190.2 0.0 1.5 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|156938174|ref|YP_001435970.1| - 2e-47 160.9 0.1 4.5e-47 159.8 0.0 1.6 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DUF1464 PF07318.12 gi|156938175|ref|YP_001435971.1| - 1.1e-08 34.7 0.0 1.2e-08 34.5 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1464) LpxI_N PF17930.1 gi|156938175|ref|YP_001435971.1| - 0.063 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 LpxI N-terminal domain MoeA_N PF03453.17 gi|156938177|ref|YP_001435973.1| - 3.1e-33 114.8 0.0 4.7e-33 114.2 0.0 1.2 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|156938177|ref|YP_001435973.1| - 7.2e-18 64.6 0.0 1.2e-17 63.9 0.0 1.4 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|156938177|ref|YP_001435973.1| - 4.5e-12 46.0 0.1 1.1e-11 44.8 0.1 1.7 1 0 0 1 1 1 1 MoeA C-terminal region (domain IV) PcrB PF01884.17 gi|156938177|ref|YP_001435973.1| - 0.064 12.7 0.0 0.1 12.0 0.0 1.2 1 0 0 1 1 1 0 PcrB family T2SSE PF00437.20 gi|156938177|ref|YP_001435973.1| - 0.067 12.2 0.0 0.11 11.6 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein NAD_synthase PF02540.17 gi|156938178|ref|YP_001435974.1| - 3.2e-66 222.9 0.0 3.8e-66 222.7 0.0 1.0 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|156938178|ref|YP_001435974.1| - 1.6e-09 37.1 0.0 1.3e-05 24.2 0.0 2.4 2 0 0 2 2 2 2 tRNA methyl transferase Asn_synthase PF00733.21 gi|156938178|ref|YP_001435974.1| - 5.3e-06 26.3 0.0 8.4e-06 25.7 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase QueC PF06508.13 gi|156938178|ref|YP_001435974.1| - 0.00014 21.5 0.0 0.0003 20.3 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC MarR_2 PF12802.7 gi|156938178|ref|YP_001435974.1| - 0.0024 17.7 0.0 0.0093 15.8 0.0 2.1 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|156938178|ref|YP_001435974.1| - 0.0032 17.2 0.2 0.038 13.8 0.0 2.7 3 0 0 3 3 3 1 Homeodomain-like domain DUF460 PF04312.13 gi|156938179|ref|YP_001435975.1| - 3.8e-47 159.5 0.3 1.9e-46 157.3 0.0 2.3 3 0 0 3 3 3 1 Protein of unknown function (DUF460) NPV_P10 PF05531.12 gi|156938179|ref|YP_001435975.1| - 0.019 15.4 2.9 0.35 11.4 0.5 3.7 3 0 0 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1664 PF07889.12 gi|156938179|ref|YP_001435975.1| - 0.14 12.2 6.3 0.4 10.7 2.3 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) GLE1 PF07817.13 gi|156938179|ref|YP_001435975.1| - 0.17 11.1 0.3 0.43 9.8 0.3 1.6 2 0 0 2 2 2 0 GLE1-like protein DUF3450 PF11932.8 gi|156938179|ref|YP_001435975.1| - 0.24 10.7 12.7 0.041 13.2 2.3 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF3450) Fzo_mitofusin PF04799.13 gi|156938179|ref|YP_001435975.1| - 0.24 10.9 5.7 0.11 12.0 2.4 2.2 2 0 0 2 2 2 0 fzo-like conserved region DivIC PF04977.15 gi|156938179|ref|YP_001435975.1| - 0.37 10.6 13.6 1.4 8.7 2.0 3.5 2 1 1 3 3 3 0 Septum formation initiator DUF948 PF06103.11 gi|156938179|ref|YP_001435975.1| - 0.37 11.1 2.8 5.2 7.4 0.3 3.7 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Baculo_PEP_C PF04513.12 gi|156938179|ref|YP_001435975.1| - 0.39 10.8 3.3 1.3 9.0 1.7 2.4 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Macoilin PF09726.9 gi|156938179|ref|YP_001435975.1| - 0.41 9.2 10.1 1.2 7.6 10.1 1.7 1 1 0 1 1 1 0 Macoilin family TFA2_Winged_2 PF18121.1 gi|156938179|ref|YP_001435975.1| - 0.93 9.2 3.7 6.9 6.4 0.3 3.8 3 0 0 3 3 3 0 TFA2 Winged helix domain 2 ADIP PF11559.8 gi|156938179|ref|YP_001435975.1| - 0.99 9.5 10.3 0.37 10.9 6.5 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding YlqD PF11068.8 gi|156938179|ref|YP_001435975.1| - 2 8.8 8.6 0.22 11.9 2.3 2.5 3 0 0 3 3 2 0 YlqD protein Cnn_1N PF07989.11 gi|156938179|ref|YP_001435975.1| - 2 8.6 21.1 0.031 14.4 7.8 3.7 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 DASH_Dam1 PF08653.10 gi|156938179|ref|YP_001435975.1| - 2.1 8.2 4.6 0.69 9.8 0.1 2.5 3 0 0 3 3 3 0 DASH complex subunit Dam1 IL2 PF00715.17 gi|156938179|ref|YP_001435975.1| - 2.1 8.3 5.0 13 5.7 1.0 3.0 3 0 0 3 3 3 0 Interleukin 2 SKA2 PF16740.5 gi|156938179|ref|YP_001435975.1| - 2.2 8.1 8.4 0.34 10.7 3.5 2.2 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 Tup_N PF08581.10 gi|156938179|ref|YP_001435975.1| - 3.1 8.1 13.0 0.81 10.0 7.0 2.9 2 1 0 2 2 2 0 Tup N-terminal Atg14 PF10186.9 gi|156938179|ref|YP_001435975.1| - 3.2 6.7 8.5 0.98 8.4 3.3 2.2 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 DUF5082 PF16888.5 gi|156938179|ref|YP_001435975.1| - 4.7 7.5 9.4 0.14 12.5 1.3 2.6 4 0 0 4 4 2 0 Domain of unknown function (DUF5082) BLOC1_2 PF10046.9 gi|156938179|ref|YP_001435975.1| - 8.5 6.8 14.8 1.4 9.3 3.8 3.9 3 1 1 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF1640 PF07798.11 gi|156938179|ref|YP_001435975.1| - 9 6.3 13.3 1.3 9.0 3.1 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF1640) RIO1 PF01163.22 gi|156938180|ref|YP_001435976.1| - 2.2e-43 148.1 0.0 3.2e-43 147.5 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 gi|156938180|ref|YP_001435976.1| - 7.5e-19 67.7 1.8 1.3e-18 67.0 1.3 1.7 2 0 0 2 2 2 1 Rio2, N-terminal APH PF01636.23 gi|156938180|ref|YP_001435976.1| - 2.9e-06 27.4 0.2 0.051 13.5 0.0 2.7 2 1 1 3 3 3 2 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|156938180|ref|YP_001435976.1| - 3.3e-06 26.1 0.0 1.1e-05 24.4 0.0 1.7 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 gi|156938180|ref|YP_001435976.1| - 0.00085 18.7 0.0 0.0035 16.7 0.0 2.0 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Rrf2 PF02082.20 gi|156938180|ref|YP_001435976.1| - 0.031 14.6 0.0 0.058 13.7 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator Choline_kinase PF01633.20 gi|156938180|ref|YP_001435976.1| - 0.13 11.8 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 Choline/ethanolamine kinase HTH_3 PF01381.22 gi|156938181|ref|YP_001435977.1| - 1.4e-09 37.9 0.0 3.9e-09 36.4 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|156938181|ref|YP_001435977.1| - 2e-06 27.7 0.0 6.6e-06 26.1 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|156938181|ref|YP_001435977.1| - 0.00013 22.3 0.0 0.00038 20.7 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_17 PF12728.7 gi|156938181|ref|YP_001435977.1| - 0.00017 21.7 0.6 0.00071 19.7 0.0 2.4 2 1 1 3 3 3 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|156938181|ref|YP_001435977.1| - 0.00066 20.1 0.0 0.0028 18.1 0.0 2.0 2 0 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain Phage_CI_repr PF07022.13 gi|156938181|ref|YP_001435977.1| - 0.00076 19.5 0.0 0.0021 18.1 0.0 1.8 1 0 0 1 1 1 1 Bacteriophage CI repressor helix-turn-helix domain HTH_11 PF08279.12 gi|156938181|ref|YP_001435977.1| - 0.00091 19.1 0.0 0.002 18.0 0.0 1.6 1 0 0 1 1 1 1 HTH domain HTH_22 PF13309.6 gi|156938181|ref|YP_001435977.1| - 0.0013 18.8 0.0 0.0032 17.5 0.0 1.8 1 0 0 1 1 1 1 HTH domain YdaS_antitoxin PF15943.5 gi|156938181|ref|YP_001435977.1| - 0.0027 17.6 0.0 0.018 14.9 0.0 2.1 2 0 0 2 2 2 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT NUMOD1 PF07453.13 gi|156938181|ref|YP_001435977.1| - 0.0027 17.9 0.3 0.017 15.4 0.0 2.2 2 0 0 2 2 2 1 NUMOD1 domain HTH_10 PF04967.12 gi|156938181|ref|YP_001435977.1| - 0.0074 16.1 0.0 0.38 10.6 0.0 3.0 2 1 1 3 3 3 1 HTH DNA binding domain UPF0122 PF04297.14 gi|156938181|ref|YP_001435977.1| - 0.039 14.2 0.0 0.11 12.7 0.0 1.8 1 1 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like GP3_package PF16677.5 gi|156938181|ref|YP_001435977.1| - 0.058 13.5 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 DNA-packaging protein gp3 TnsD PF15978.5 gi|156938181|ref|YP_001435977.1| - 0.084 11.8 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_Crp_2 PF13545.6 gi|156938181|ref|YP_001435977.1| - 0.12 12.3 0.0 0.27 11.3 0.0 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain Mga PF05043.13 gi|156938181|ref|YP_001435977.1| - 0.14 12.8 0.1 0.49 11.0 0.0 1.9 2 0 0 2 2 2 0 Mga helix-turn-helix domain Slx4 PF09494.10 gi|156938181|ref|YP_001435977.1| - 0.15 12.1 0.1 0.98 9.4 0.0 2.3 2 0 0 2 2 2 0 Slx4 endonuclease DUF61 PF01886.16 gi|156938182|ref|YP_001435978.1| - 1.1e-23 83.7 0.2 1.2e-23 83.5 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF61 zf-Mss51 PF13824.6 gi|156938183|ref|YP_001435979.1| - 0.00018 21.5 0.4 0.27 11.4 0.1 2.3 2 0 0 2 2 2 2 Zinc-finger of mitochondrial splicing suppressor 51 DZR PF12773.7 gi|156938183|ref|YP_001435979.1| - 0.00024 21.1 0.2 0.00038 20.4 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon FYDLN_acid PF09538.10 gi|156938183|ref|YP_001435979.1| - 0.00038 21.1 3.2 0.24 12.1 0.2 2.1 2 0 0 2 2 2 2 Protein of unknown function (FYDLN_acid) zf-H2C2_2 PF13465.6 gi|156938183|ref|YP_001435979.1| - 0.0006 20.1 2.4 0.81 10.2 0.6 2.3 2 0 0 2 2 2 2 Zinc-finger double domain CpXC PF14353.6 gi|156938183|ref|YP_001435979.1| - 0.00082 19.4 0.2 0.0017 18.4 0.1 1.5 1 1 0 1 1 1 1 CpXC protein Zn_Tnp_IS1595 PF12760.7 gi|156938183|ref|YP_001435979.1| - 0.0027 17.6 4.7 0.19 11.7 5.2 2.2 1 1 1 2 2 2 2 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|156938183|ref|YP_001435979.1| - 0.0045 16.9 0.8 3.2 7.7 0.0 2.4 2 0 0 2 2 2 2 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|156938183|ref|YP_001435979.1| - 0.0049 16.5 7.6 0.15 11.8 0.2 2.6 3 0 0 3 3 2 2 zinc-ribbon domain zf-ZPR1 PF03367.13 gi|156938183|ref|YP_001435979.1| - 0.0049 16.7 1.8 0.047 13.5 1.8 2.1 1 1 0 1 1 1 1 ZPR1 zinc-finger domain TF_Zn_Ribbon PF08271.12 gi|156938183|ref|YP_001435979.1| - 0.0061 16.1 1.7 1.2 8.7 0.1 2.6 2 0 0 2 2 2 1 TFIIB zinc-binding Zn-ribbon_8 PF09723.10 gi|156938183|ref|YP_001435979.1| - 0.0063 16.6 1.0 1.2 9.4 0.2 2.4 2 0 0 2 2 2 1 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|156938183|ref|YP_001435979.1| - 0.007 16.0 1.9 0.39 10.4 0.3 2.5 2 0 0 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit zf_UBZ PF18439.1 gi|156938183|ref|YP_001435979.1| - 0.0072 15.9 2.8 0.051 13.2 0.1 2.3 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger zf-IS66 PF13005.7 gi|156938183|ref|YP_001435979.1| - 0.008 16.6 2.0 0.0084 16.5 0.2 2.0 2 0 0 2 2 1 1 zinc-finger binding domain of transposase IS66 zf-ribbon_3 PF13248.6 gi|156938183|ref|YP_001435979.1| - 0.0081 15.5 4.8 0.85 9.1 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|156938183|ref|YP_001435979.1| - 0.011 15.6 0.9 1.9 8.5 0.0 2.5 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_5 PF13719.6 gi|156938183|ref|YP_001435979.1| - 0.014 15.2 0.4 1.1 9.1 0.0 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|156938183|ref|YP_001435979.1| - 0.016 14.9 1.3 1.4 8.7 0.1 2.3 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein UPF0547 PF10571.9 gi|156938183|ref|YP_001435979.1| - 0.017 15.2 5.9 0.41 10.8 0.7 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 TFIIS_C PF01096.18 gi|156938183|ref|YP_001435979.1| - 0.018 14.9 2.9 0.58 10.1 0.3 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) PhnA_Zn_Ribbon PF08274.12 gi|156938183|ref|YP_001435979.1| - 0.029 14.3 1.1 7.6 6.6 0.1 2.2 2 0 0 2 2 2 0 PhnA Zinc-Ribbon DUF1610 PF07754.11 gi|156938183|ref|YP_001435979.1| - 0.03 14.3 10.7 0.41 10.7 2.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) Lar_restr_allev PF14354.6 gi|156938183|ref|YP_001435979.1| - 0.036 14.4 0.1 0.087 13.2 0.1 1.7 1 1 0 1 1 1 0 Restriction alleviation protein Lar RNA_POL_M_15KD PF02150.16 gi|156938183|ref|YP_001435979.1| - 0.045 13.6 0.6 2.2 8.2 0.0 2.6 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit HypA PF01155.19 gi|156938183|ref|YP_001435979.1| - 0.048 13.7 0.3 0.12 12.4 0.2 1.8 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-3CxxC PF13695.6 gi|156938183|ref|YP_001435979.1| - 0.055 13.9 0.9 0.15 12.6 0.2 2.0 2 1 0 2 2 2 0 Zinc-binding domain zf-NADH-PPase PF09297.11 gi|156938183|ref|YP_001435979.1| - 0.061 13.0 1.3 1.8 8.3 0.1 2.2 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain Prok-RING_1 PF14446.6 gi|156938183|ref|YP_001435979.1| - 0.066 13.1 0.8 0.53 10.3 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Nudix_N_2 PF14803.6 gi|156938183|ref|YP_001435979.1| - 0.083 12.8 0.9 3.8 7.5 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal zf_C2H2_10 PF18414.1 gi|156938183|ref|YP_001435979.1| - 0.1 12.2 5.0 2.2 7.9 0.4 2.4 2 0 0 2 2 2 0 C2H2 type zinc-finger Anti-TRAP PF15777.5 gi|156938183|ref|YP_001435979.1| - 0.11 12.4 0.8 4.2 7.4 0.0 2.5 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein Rep_fac-A_C PF08646.10 gi|156938183|ref|YP_001435979.1| - 0.12 12.1 0.3 1.1 9.0 0.0 2.0 1 1 0 2 2 2 0 Replication factor-A C terminal domain zf-ISL3 PF14690.6 gi|156938183|ref|YP_001435979.1| - 0.12 13.0 4.3 2.7 8.7 0.1 2.5 2 1 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-tcix PF14952.6 gi|156938183|ref|YP_001435979.1| - 0.2 11.3 2.9 5.6 6.7 0.4 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding Sgf11 PF08209.11 gi|156938183|ref|YP_001435979.1| - 0.27 10.9 2.9 7.7 6.2 0.4 2.2 2 0 0 2 2 2 0 Sgf11 (transcriptional regulation protein) DUF4428 PF14471.6 gi|156938183|ref|YP_001435979.1| - 0.3 11.0 3.0 0.46 10.5 0.1 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4428) Rubredoxin PF00301.20 gi|156938183|ref|YP_001435979.1| - 0.35 10.9 3.9 9.4 6.3 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin zf-C2H2_4 PF13894.6 gi|156938183|ref|YP_001435979.1| - 0.58 11.1 2.3 13 7.0 0.2 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger zf-RING_7 PF02591.15 gi|156938183|ref|YP_001435979.1| - 1.2 9.4 3.9 23 5.3 0.1 3.0 3 1 0 3 3 3 0 C4-type zinc ribbon domain zf-HYPF PF07503.12 gi|156938183|ref|YP_001435979.1| - 1.3 8.9 4.1 9.4 6.1 0.2 2.5 3 0 0 3 3 2 0 HypF finger zf-3CxxC_2 PF17180.4 gi|156938183|ref|YP_001435979.1| - 1.5 9.6 5.3 2 9.2 2.0 2.5 2 1 0 2 2 2 0 Zinc-binding domain zf-C2H2 PF00096.26 gi|156938183|ref|YP_001435979.1| - 2.8 8.6 5.0 16 6.2 0.3 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type Wbp11 PF09429.10 gi|156938183|ref|YP_001435979.1| - 4.9 7.6 9.7 0.15 12.5 2.3 1.9 2 0 0 2 2 2 0 WW domain binding protein 11 Elf1 PF05129.13 gi|156938183|ref|YP_001435979.1| - 5.2 7.2 8.4 13 5.9 1.1 2.8 1 1 2 3 3 3 0 Transcription elongation factor Elf1 like Filamin PF00630.19 gi|156938184|ref|YP_001435980.1| - 0.11 13.4 0.0 0.15 12.9 0.0 1.3 1 1 0 1 1 1 0 Filamin/ABP280 repeat LysE PF01810.18 gi|156938185|ref|YP_001435981.1| - 4e-09 36.2 22.3 8.3e-09 35.2 22.3 1.6 1 1 0 1 1 1 1 LysE type translocator Strabismus PF06638.11 gi|156938185|ref|YP_001435981.1| - 0.21 10.2 2.6 0.27 9.8 2.6 1.1 1 0 0 1 1 1 0 Strabismus protein CPSase_L_D2 PF02786.17 gi|156938186|ref|YP_001435982.1| - 4.3e-103 343.3 0.0 6.3e-71 238.2 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|156938186|ref|YP_001435982.1| - 4.4e-19 68.7 0.1 9.6e-09 35.0 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|156938186|ref|YP_001435982.1| - 1.1e-18 67.5 0.3 5.6e-10 39.1 0.1 3.2 3 1 0 3 3 3 2 D-ala D-ala ligase C-terminus CPSase_L_D3 PF02787.19 gi|156938186|ref|YP_001435982.1| - 6.3e-18 65.3 0.4 2e-17 63.7 0.4 1.9 1 1 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATPgrasp_Ter PF15632.6 gi|156938186|ref|YP_001435982.1| - 4.5e-15 55.6 0.0 3.3e-07 30.1 0.0 2.8 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon GARS_A PF01071.19 gi|156938186|ref|YP_001435982.1| - 2.9e-14 53.3 0.2 3.3e-06 27.0 0.1 3.5 2 1 0 2 2 2 2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.14 gi|156938186|ref|YP_001435982.1| - 3.8e-14 53.1 0.1 8e-07 29.2 0.0 2.9 2 1 0 2 2 2 2 ATP-grasp domain RimK PF08443.11 gi|156938186|ref|YP_001435982.1| - 3.2e-08 33.4 0.0 0.0019 17.8 0.0 2.6 2 0 0 2 2 2 2 RimK-like ATP-grasp domain ATP-grasp_5 PF13549.6 gi|156938186|ref|YP_001435982.1| - 6.3e-06 25.8 0.0 0.0023 17.4 0.0 2.9 2 0 0 2 2 2 2 ATP-grasp domain ATP-grasp_2 PF08442.10 gi|156938186|ref|YP_001435982.1| - 0.0026 17.3 0.0 0.2 11.2 0.0 2.9 2 1 0 2 2 2 1 ATP-grasp domain CPSase_sm_chain PF00988.22 gi|156938187|ref|YP_001435983.1| - 9e-47 158.1 0.0 1.5e-46 157.4 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|156938187|ref|YP_001435983.1| - 5.3e-39 134.0 0.0 7.5e-39 133.5 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|156938187|ref|YP_001435983.1| - 1.1e-11 44.9 0.1 6.3e-09 35.9 0.1 2.4 1 1 0 1 1 1 1 Peptidase C26 DJ-1_PfpI PF01965.24 gi|156938187|ref|YP_001435983.1| - 0.0075 16.1 0.2 0.015 15.1 0.0 1.5 2 0 0 2 2 2 1 DJ-1/PfpI family Thiolase_N PF00108.23 gi|156938188|ref|YP_001435984.1| - 1e-85 287.3 0.0 1.3e-85 287.0 0.0 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|156938188|ref|YP_001435984.1| - 6.9e-39 132.3 0.0 1.8e-36 124.5 0.0 2.4 2 0 0 2 2 2 2 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|156938188|ref|YP_001435984.1| - 2.2e-07 30.7 1.1 0.0035 17.0 0.6 2.4 1 1 1 2 2 2 2 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|156938188|ref|YP_001435984.1| - 0.0096 15.8 0.4 0.32 10.9 0.1 2.3 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Ketoacyl-synt_C PF02801.22 gi|156938188|ref|YP_001435984.1| - 0.021 14.8 1.0 5.9 6.9 0.0 3.0 3 0 0 3 3 3 0 Beta-ketoacyl synthase, C-terminal domain Imm52 PF15579.6 gi|156938188|ref|YP_001435984.1| - 0.083 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Immunity protein 52 zf-ribbon_3 PF13248.6 gi|156938189|ref|YP_001435985.1| - 2.7e-06 26.6 0.7 0.034 13.5 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DNA_ligase_ZBD PF03119.16 gi|156938189|ref|YP_001435985.1| - 1e-05 25.5 2.7 0.035 14.1 0.1 2.2 2 0 0 2 2 2 2 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_4 PF13717.6 gi|156938189|ref|YP_001435985.1| - 1.7e-05 24.7 0.9 0.00034 20.5 0.8 2.1 1 1 1 2 2 2 2 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|156938189|ref|YP_001435985.1| - 2.6e-05 23.8 1.2 0.095 12.5 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain Prok-RING_1 PF14446.6 gi|156938189|ref|YP_001435985.1| - 9.4e-05 22.3 4.2 0.00024 20.9 4.2 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 1 zf-C4_Topoisom PF01396.19 gi|156938189|ref|YP_001435985.1| - 0.00016 21.4 3.1 0.02 14.7 0.2 2.1 2 0 0 2 2 2 1 Topoisomerase DNA binding C4 zinc finger TF_Zn_Ribbon PF08271.12 gi|156938189|ref|YP_001435985.1| - 0.00026 20.5 1.4 0.00035 20.0 1.4 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding HypA PF01155.19 gi|156938189|ref|YP_001435985.1| - 0.00026 21.0 0.6 0.00028 20.9 0.6 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|156938189|ref|YP_001435985.1| - 0.00028 20.9 2.4 0.00058 19.9 2.4 1.6 1 1 0 1 1 1 1 Zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|156938189|ref|YP_001435985.1| - 0.00047 20.1 0.5 0.00083 19.2 0.5 1.5 1 1 0 1 1 1 1 PhnA Zinc-Ribbon Lar_restr_allev PF14354.6 gi|156938189|ref|YP_001435985.1| - 0.00064 20.0 1.0 0.001 19.4 1.0 1.3 1 1 0 1 1 1 1 Restriction alleviation protein Lar Ogr_Delta PF04606.12 gi|156938189|ref|YP_001435985.1| - 0.00068 19.6 0.4 0.3 11.1 0.0 2.1 2 0 0 2 2 2 1 Ogr/Delta-like zinc finger zf-TFIIB PF13453.6 gi|156938189|ref|YP_001435985.1| - 0.0014 17.9 2.4 0.0053 16.1 2.6 1.7 1 1 1 2 2 2 2 Transcription factor zinc-finger Nudix_N_2 PF14803.6 gi|156938189|ref|YP_001435985.1| - 0.0015 18.4 0.7 0.48 10.4 0.1 2.5 2 1 0 2 2 2 1 Nudix N-terminal zf-RING_7 PF02591.15 gi|156938189|ref|YP_001435985.1| - 0.0019 18.4 0.9 0.028 14.6 0.1 2.4 2 0 0 2 2 2 1 C4-type zinc ribbon domain zf-NADH-PPase PF09297.11 gi|156938189|ref|YP_001435985.1| - 0.002 17.7 1.6 0.68 9.7 0.3 2.2 2 0 0 2 2 2 1 NADH pyrophosphatase zinc ribbon domain Cys_rich_CPXG PF14255.6 gi|156938189|ref|YP_001435985.1| - 0.0023 17.8 2.7 0.048 13.6 2.7 2.2 1 1 0 1 1 1 1 Cysteine-rich CPXCG zf-FPG_IleRS PF06827.14 gi|156938189|ref|YP_001435985.1| - 0.0024 17.7 0.3 1.1 9.2 0.1 2.3 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS zf-ISL3 PF14690.6 gi|156938189|ref|YP_001435985.1| - 0.0024 18.5 0.2 0.33 11.7 0.0 2.1 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 YacG PF03884.14 gi|156938189|ref|YP_001435985.1| - 0.0024 17.5 1.4 0.64 9.8 0.1 2.2 2 0 0 2 2 2 1 DNA gyrase inhibitor YacG DZR PF12773.7 gi|156938189|ref|YP_001435985.1| - 0.0033 17.4 0.4 0.0073 16.3 0.4 1.5 1 1 0 1 1 1 1 Double zinc ribbon zinc_ribbon_5 PF13719.6 gi|156938189|ref|YP_001435985.1| - 0.0033 17.2 4.2 0.18 11.6 1.7 2.5 1 1 1 2 2 2 2 zinc-ribbon domain Rad50_zn_hook PF04423.14 gi|156938189|ref|YP_001435985.1| - 0.0078 16.0 0.4 0.37 10.7 0.1 2.2 2 0 0 2 2 2 1 Rad50 zinc hook motif zf-RRN7 PF11781.8 gi|156938189|ref|YP_001435985.1| - 0.014 15.1 2.1 2.2 8.1 0.2 2.2 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 CpXC PF14353.6 gi|156938189|ref|YP_001435985.1| - 0.014 15.4 1.6 0.59 10.2 0.1 2.1 1 1 1 2 2 2 0 CpXC protein OrfB_Zn_ribbon PF07282.11 gi|156938189|ref|YP_001435985.1| - 0.015 15.2 0.4 0.033 14.1 0.3 1.6 1 1 1 2 2 2 0 Putative transposase DNA-binding domain zf_UBZ PF18439.1 gi|156938189|ref|YP_001435985.1| - 0.016 14.8 1.3 2.8 7.6 0.1 2.3 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-CSL PF05207.13 gi|156938189|ref|YP_001435985.1| - 0.019 14.7 0.3 0.027 14.2 0.3 1.3 1 0 0 1 1 1 0 CSL zinc finger zf-IS66 PF13005.7 gi|156938189|ref|YP_001435985.1| - 0.02 15.3 3.7 1.1 9.7 0.3 2.3 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc-ribbons_6 PF07191.12 gi|156938189|ref|YP_001435985.1| - 0.02 14.9 1.6 0.13 12.3 1.6 1.9 1 1 0 1 1 1 0 zinc-ribbons zf-Di19 PF05605.12 gi|156938189|ref|YP_001435985.1| - 0.022 15.0 0.2 4.9 7.5 0.1 2.1 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Desulfoferrod_N PF06397.12 gi|156938189|ref|YP_001435985.1| - 0.023 14.3 0.4 4.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain YhfH PF14149.6 gi|156938189|ref|YP_001435985.1| - 0.024 14.6 2.3 2.5 8.1 0.2 2.2 2 0 0 2 2 2 0 YhfH-like protein Zn_ribbon_SprT PF17283.2 gi|156938189|ref|YP_001435985.1| - 0.032 14.2 0.5 4.3 7.3 0.0 2.1 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-C3HC4_3 PF13920.6 gi|156938189|ref|YP_001435985.1| - 0.036 13.9 0.7 0.68 9.8 0.1 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-Sec23_Sec24 PF04810.15 gi|156938189|ref|YP_001435985.1| - 0.037 14.1 0.0 2.8 8.1 0.0 2.1 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger RNA_POL_M_15KD PF02150.16 gi|156938189|ref|YP_001435985.1| - 0.037 13.9 0.2 0.079 12.8 0.2 1.6 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit PADR1 PF08063.12 gi|156938189|ref|YP_001435985.1| - 0.038 13.8 2.9 0.23 11.3 0.1 2.1 1 1 1 2 2 2 0 PADR1 (NUC008) domain Zn_Tnp_IS1595 PF12760.7 gi|156938189|ref|YP_001435985.1| - 0.039 13.9 0.3 5 7.2 0.0 2.1 2 0 0 2 2 2 0 Transposase zinc-ribbon domain DUF983 PF06170.12 gi|156938189|ref|YP_001435985.1| - 0.04 14.3 1.3 6 7.4 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF983) zf-LITAF-like PF10601.9 gi|156938189|ref|YP_001435985.1| - 0.041 14.1 0.2 3.8 7.9 0.0 2.1 2 0 0 2 2 2 0 LITAF-like zinc ribbon domain zf-ACC PF17848.1 gi|156938189|ref|YP_001435985.1| - 0.046 13.8 3.4 1.1 9.3 0.2 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain zf-C2H2_4 PF13894.6 gi|156938189|ref|YP_001435985.1| - 0.059 14.2 0.5 8.5 7.5 0.1 2.2 2 0 0 2 2 2 0 C2H2-type zinc finger Zn_ribbon_recom PF13408.6 gi|156938189|ref|YP_001435985.1| - 0.068 13.7 0.1 1.3 9.6 0.0 2.1 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain zf-tcix PF14952.6 gi|156938189|ref|YP_001435985.1| - 0.073 12.7 4.3 3 7.5 0.3 2.2 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding DUF3797 PF12677.7 gi|156938189|ref|YP_001435985.1| - 0.074 13.0 3.9 0.8 9.6 0.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zf-HYPF PF07503.12 gi|156938189|ref|YP_001435985.1| - 0.074 12.8 1.8 0.91 9.4 1.8 2.0 1 1 0 1 1 1 0 HypF finger TerY_C PF15616.6 gi|156938189|ref|YP_001435985.1| - 0.086 13.0 1.6 0.69 10.0 1.6 1.9 1 1 0 1 1 1 0 TerY-C metal binding domain DNA_RNApol_7kD PF03604.13 gi|156938189|ref|YP_001435985.1| - 0.097 12.4 3.0 0.29 10.8 1.7 2.3 1 1 1 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit UPF0547 PF10571.9 gi|156938189|ref|YP_001435985.1| - 0.099 12.7 4.7 2 8.6 0.5 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 DUF3268 PF11672.8 gi|156938189|ref|YP_001435985.1| - 0.11 12.9 0.2 0.21 11.9 0.2 1.5 1 1 0 1 1 1 0 zinc-finger-containing domain Prim_Zn_Ribbon PF08273.12 gi|156938189|ref|YP_001435985.1| - 0.11 12.8 4.7 3.1 8.2 0.4 2.2 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Zn_Tnp_IS1 PF03811.13 gi|156938189|ref|YP_001435985.1| - 0.11 12.2 0.4 1.8 8.4 0.0 2.1 2 0 0 2 2 2 0 InsA N-terminal domain zf-nanos PF05741.13 gi|156938189|ref|YP_001435985.1| - 0.11 12.7 0.9 14 6.0 0.1 2.2 2 0 0 2 2 2 0 Nanos RNA binding domain Mu-like_Com PF10122.9 gi|156938189|ref|YP_001435985.1| - 0.13 11.7 3.3 2.2 7.8 0.1 2.1 1 1 1 2 2 2 0 Mu-like prophage protein Com Ribosomal_S27e PF01667.17 gi|156938189|ref|YP_001435985.1| - 0.14 11.9 2.8 0.33 10.7 2.8 1.7 1 1 0 1 1 1 0 Ribosomal protein S27 TRAF6_Z2 PF18048.1 gi|156938189|ref|YP_001435985.1| - 0.17 12.0 0.5 0.17 12.0 0.5 2.0 2 0 0 2 2 2 0 TNF receptor-associated factor 6 zinc finger 2 Nop10p PF04135.12 gi|156938189|ref|YP_001435985.1| - 0.2 11.7 0.9 8.3 6.5 0.1 2.2 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family zf-C3HC PF07967.13 gi|156938189|ref|YP_001435985.1| - 0.2 11.7 0.5 0.96 9.5 0.1 1.8 1 1 1 2 2 2 0 C3HC zinc finger-like zf-C2H2_6 PF13912.6 gi|156938189|ref|YP_001435985.1| - 0.22 11.6 1.8 8.7 6.5 0.1 2.1 2 0 0 2 2 2 0 C2H2-type zinc finger Ribosomal_L32p PF01783.23 gi|156938189|ref|YP_001435985.1| - 0.23 11.7 1.7 3.8 7.9 0.2 2.1 1 1 1 2 2 2 0 Ribosomal L32p protein family zf-H2C2_2 PF13465.6 gi|156938189|ref|YP_001435985.1| - 0.32 11.5 1.0 13 6.4 0.0 2.2 2 0 0 2 2 2 0 Zinc-finger double domain zf-Mss51 PF13824.6 gi|156938189|ref|YP_001435985.1| - 0.44 10.7 2.6 1.6 8.9 2.7 1.8 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Rubredoxin PF00301.20 gi|156938189|ref|YP_001435985.1| - 0.79 9.8 5.9 5 7.2 0.4 2.5 1 1 1 2 2 2 0 Rubredoxin RimK PF08443.11 gi|156938190|ref|YP_001435986.1| - 7.5e-37 126.8 0.0 1e-36 126.3 0.0 1.2 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|156938190|ref|YP_001435986.1| - 3.8e-13 49.2 0.0 8.5e-13 48.1 0.0 1.5 2 0 0 2 2 2 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|156938190|ref|YP_001435986.1| - 1.4e-05 25.2 0.0 3.8e-05 23.8 0.0 1.8 2 1 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|156938190|ref|YP_001435986.1| - 0.0097 15.2 0.0 0.12 11.6 0.0 2.3 3 0 0 3 3 3 1 Sugar-transfer associated ATP-grasp ATP-grasp PF02222.22 gi|156938190|ref|YP_001435986.1| - 0.015 14.9 0.0 0.028 14.0 0.0 1.6 1 1 0 1 1 1 0 ATP-grasp domain R2K_3 PF14243.6 gi|156938190|ref|YP_001435986.1| - 0.025 14.6 0.0 0.043 13.8 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 3 HIT PF01230.23 gi|156938191|ref|YP_001435987.1| - 1.2e-12 48.4 0.0 2e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 HIT domain CwfJ_C_1 PF04677.15 gi|156938191|ref|YP_001435987.1| - 2.7e-08 33.7 0.0 4.6e-08 33.0 0.0 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DcpS_C PF11969.8 gi|156938191|ref|YP_001435987.1| - 2.4e-06 28.0 0.0 3.8e-06 27.4 0.0 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding NHR2 PF08788.11 gi|156938191|ref|YP_001435987.1| - 0.098 12.4 0.2 0.25 11.1 0.0 1.8 2 0 0 2 2 2 0 NHR2 domain like Arc_PepC_II PF06847.11 gi|156938192|ref|YP_001435988.1| - 2.3e-22 79.3 0.3 4.1e-22 78.5 0.3 1.4 1 0 0 1 1 1 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|156938192|ref|YP_001435988.1| - 5.7e-10 39.6 10.0 5.7e-10 39.6 10.0 1.6 2 0 0 2 2 2 1 Type IV leader peptidase family PAPS_reduct PF01507.19 gi|156938193|ref|YP_001435989.1| - 1.5e-14 54.4 0.0 2.4e-14 53.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DFP PF04127.15 gi|156938193|ref|YP_001435989.1| - 0.0024 17.8 0.0 0.0047 16.8 0.0 1.4 1 0 0 1 1 1 1 DNA / pantothenate metabolism flavoprotein tRNA_Me_trans PF03054.16 gi|156938193|ref|YP_001435989.1| - 0.028 13.2 0.2 0.04 12.7 0.2 1.2 1 0 0 1 1 1 0 tRNA methyl transferase QueC PF06508.13 gi|156938193|ref|YP_001435989.1| - 0.029 13.8 0.0 0.047 13.2 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC Diphthami_syn_2 PF01902.17 gi|156938193|ref|YP_001435989.1| - 0.031 13.8 0.1 0.051 13.1 0.1 1.3 1 0 0 1 1 1 0 Diphthamide synthase ATP_bind_3 PF01171.20 gi|156938193|ref|YP_001435989.1| - 0.094 12.5 0.0 0.15 11.8 0.0 1.3 1 0 0 1 1 1 0 PP-loop family Ribosomal_S17 PF00366.20 gi|156938194|ref|YP_001435990.1| - 1.7e-24 85.7 0.5 2.2e-24 85.3 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S17 zf-C3H1 PF10650.9 gi|156938194|ref|YP_001435990.1| - 0.021 14.6 1.3 0.038 13.7 1.3 1.3 1 0 0 1 1 1 0 Putative zinc-finger domain Ribosomal_S17_N PF16205.5 gi|156938194|ref|YP_001435990.1| - 0.13 12.6 0.7 0.2 12.0 0.1 1.7 2 0 0 2 2 2 0 Ribosomal_S17 N-terminal Ribosomal_L14 PF00238.19 gi|156938195|ref|YP_001435991.1| - 7.5e-37 126.1 0.2 8.9e-37 125.9 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e PAS_3 PF08447.12 gi|156938195|ref|YP_001435991.1| - 0.044 14.1 0.0 0.079 13.3 0.0 1.4 1 0 0 1 1 1 0 PAS fold Ribosomal_L26 PF16906.5 gi|156938196|ref|YP_001435992.1| - 4.7e-33 113.5 0.9 6e-33 113.2 0.9 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 gi|156938196|ref|YP_001435992.1| - 1.2e-09 37.7 3.5 1.2e-09 37.7 3.5 1.7 2 0 0 2 2 2 1 KOW motif hSH3 PF14603.6 gi|156938196|ref|YP_001435992.1| - 0.023 15.1 0.0 0.041 14.3 0.0 1.5 1 1 0 1 1 1 0 Helically-extended SH3 domain GntR PF00392.21 gi|156938196|ref|YP_001435992.1| - 0.11 12.2 0.1 0.38 10.4 0.0 1.8 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Ribosomal_S4e PF00900.20 gi|156938197|ref|YP_001435993.1| - 1.8e-23 82.2 0.1 3.5e-23 81.3 0.1 1.5 1 0 0 1 1 1 1 Ribosomal family S4e RS4NT PF08071.12 gi|156938197|ref|YP_001435993.1| - 4.1e-18 65.2 5.8 6.6e-18 64.5 5.8 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 gi|156938197|ref|YP_001435993.1| - 2.3e-14 52.8 2.0 4.7e-14 51.8 0.1 2.2 2 0 0 2 2 2 1 S4 domain 40S_S4_C PF16121.5 gi|156938197|ref|YP_001435993.1| - 0.016 14.9 0.0 0.032 13.9 0.0 1.5 1 0 0 1 1 1 0 40S ribosomal protein S4 C-terminus S4_2 PF13275.6 gi|156938197|ref|YP_001435993.1| - 0.038 13.8 0.2 0.18 11.7 0.0 2.1 2 0 0 2 2 2 0 S4 domain KOW PF00467.29 gi|156938197|ref|YP_001435993.1| - 1.6 8.8 7.1 0.3 11.1 2.8 2.0 2 0 0 2 2 2 0 KOW motif Ribosomal_L5_C PF00673.21 gi|156938198|ref|YP_001435994.1| - 1.5e-23 82.7 0.1 4.1e-23 81.4 0.0 1.7 2 0 0 2 2 2 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|156938198|ref|YP_001435994.1| - 1.4e-20 73.3 0.1 4.4e-20 71.8 0.1 1.9 2 0 0 2 2 2 1 Ribosomal protein L5 Ribosomal_S14 PF00253.21 gi|156938199|ref|YP_001435995.1| - 1.6e-13 50.2 6.1 1.9e-13 50.0 6.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e DZR PF12773.7 gi|156938199|ref|YP_001435995.1| - 0.0045 17.0 0.3 0.0057 16.6 0.3 1.1 1 0 0 1 1 1 1 Double zinc ribbon Zn_Tnp_IS1595 PF12760.7 gi|156938199|ref|YP_001435995.1| - 0.016 15.2 3.9 0.02 14.8 3.9 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Ribosomal_S8 PF00410.19 gi|156938200|ref|YP_001435996.1| - 7.7e-28 97.0 0.1 9e-28 96.8 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 CBS PF00571.28 gi|156938201|ref|YP_001435997.1| - 1.3e-32 112.0 1.3 5.8e-18 65.1 0.2 2.0 2 0 0 2 2 2 2 CBS domain GAF PF01590.26 gi|156938201|ref|YP_001435997.1| - 0.059 14.0 0.1 0.74 10.4 0.1 1.9 1 1 1 2 2 2 0 GAF domain RibD_C PF01872.17 gi|156938201|ref|YP_001435997.1| - 0.12 12.2 0.1 0.48 10.2 0.0 1.8 1 1 1 2 2 2 0 RibD C-terminal domain GAF_2 PF13185.6 gi|156938201|ref|YP_001435997.1| - 0.14 12.4 0.1 0.24 11.7 0.1 1.4 1 1 0 1 1 1 0 GAF domain FbpA PF05833.11 gi|156938202|ref|YP_001435998.1| - 3.6e-46 157.9 6.7 5.3e-46 157.3 6.7 1.1 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|156938202|ref|YP_001435998.1| - 4.5e-26 91.6 0.1 1.5e-25 89.9 0.0 2.0 2 0 0 2 2 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|156938202|ref|YP_001435998.1| - 0.00011 22.4 0.0 0.0007 19.8 0.0 2.3 2 0 0 2 2 2 1 NFACT protein RNA binding domain H2TH PF06831.14 gi|156938202|ref|YP_001435998.1| - 0.00012 22.0 0.0 0.00049 20.0 0.0 2.0 1 0 0 1 1 1 1 Formamidopyrimidine-DNA glycosylase H2TH domain MCU PF04678.13 gi|156938202|ref|YP_001435998.1| - 0.026 14.6 1.4 0.026 14.6 1.4 2.5 1 1 1 2 2 2 0 Mitochondrial calcium uniporter V-ATPase_C PF03223.15 gi|156938202|ref|YP_001435998.1| - 0.032 13.6 8.1 0.058 12.8 8.1 1.4 1 0 0 1 1 1 0 V-ATPase subunit C Mitofilin PF09731.9 gi|156938202|ref|YP_001435998.1| - 0.064 12.1 24.2 0.021 13.7 20.6 1.8 1 1 1 2 2 2 0 Mitochondrial inner membrane protein DUF5340 PF17275.2 gi|156938202|ref|YP_001435998.1| - 0.15 12.2 1.3 0.48 10.6 1.3 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5340) ApoO PF09769.9 gi|156938202|ref|YP_001435998.1| - 0.27 11.2 3.5 1.8 8.5 0.3 2.6 2 0 0 2 2 2 0 Apolipoprotein O FliD_C PF07195.12 gi|156938202|ref|YP_001435998.1| - 0.64 9.4 7.5 1.7 8.0 7.5 1.6 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus AKNA PF12443.8 gi|156938202|ref|YP_001435998.1| - 0.65 10.7 2.6 1 10.0 0.2 2.5 2 0 0 2 2 2 0 AT-hook-containing transcription factor Ribosomal_S13 PF00416.22 gi|156938202|ref|YP_001435998.1| - 1.4 9.3 5.0 1.5 9.2 0.1 3.1 3 0 0 3 3 3 0 Ribosomal protein S13/S18 DUF4559 PF15112.6 gi|156938202|ref|YP_001435998.1| - 2.3 7.8 10.7 3.6 7.2 10.7 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) Dynamin_N PF00350.23 gi|156938202|ref|YP_001435998.1| - 2.3 8.2 4.3 2.1 8.4 0.1 2.3 1 1 1 2 2 2 0 Dynamin family Occludin_ELL PF07303.13 gi|156938202|ref|YP_001435998.1| - 2.4 8.9 17.0 0.69 10.7 4.1 3.2 3 0 0 3 3 3 0 Occludin homology domain DUF445 PF04286.12 gi|156938202|ref|YP_001435998.1| - 3.3 7.4 10.9 1 9.1 7.8 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF445) T3SSipB PF16535.5 gi|156938202|ref|YP_001435998.1| - 3.3 8.2 6.2 2.1 8.8 0.4 2.3 1 1 0 2 2 2 0 Type III cell invasion protein SipB APG17 PF04108.12 gi|156938202|ref|YP_001435998.1| - 4.7 6.2 16.8 8.2 5.4 16.8 1.3 1 0 0 1 1 1 0 Autophagy protein Apg17 MapZ_EC1 PF18041.1 gi|156938202|ref|YP_001435998.1| - 6.9 6.9 14.4 1.5 9.0 3.5 2.5 1 1 0 2 2 2 0 MapZ extracellular domain 1 PEP-utilisers_N PF05524.13 gi|156938202|ref|YP_001435998.1| - 7.3 6.8 12.8 3.3 7.9 2.6 3.1 2 1 1 3 3 3 0 PEP-utilising enzyme, N-terminal AAA_11 PF13086.6 gi|156938202|ref|YP_001435998.1| - 9 6.0 6.6 18 5.0 6.6 1.5 1 0 0 1 1 1 0 AAA domain ATP-grasp PF02222.22 gi|156938203|ref|YP_001435999.1| - 7.4e-46 155.8 0.0 1.2e-45 155.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|156938203|ref|YP_001435999.1| - 4.9e-13 49.1 0.0 1.1e-12 47.9 0.0 1.5 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|156938203|ref|YP_001435999.1| - 6.9e-13 48.6 0.0 1.5e-12 47.5 0.0 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus GARS_A PF01071.19 gi|156938203|ref|YP_001435999.1| - 2.3e-06 27.5 0.0 1.9e-05 24.5 0.0 2.2 3 0 0 3 3 3 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.14 gi|156938203|ref|YP_001435999.1| - 7.8e-06 26.0 0.0 1.5e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain Epimerase PF01370.21 gi|156938203|ref|YP_001435999.1| - 0.00011 21.7 0.0 0.00016 21.2 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RimK PF08443.11 gi|156938203|ref|YP_001435999.1| - 0.00012 21.7 0.0 0.031 13.9 0.0 2.3 2 0 0 2 2 2 1 RimK-like ATP-grasp domain LAL_C2 PF18603.1 gi|156938203|ref|YP_001435999.1| - 0.00084 19.4 0.3 0.021 15.0 0.0 2.8 3 0 0 3 3 2 1 L-amino acid ligase C-terminal domain 2 2-Hacid_dh_C PF02826.19 gi|156938203|ref|YP_001435999.1| - 0.002 17.5 0.0 0.0035 16.7 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ATP-grasp_5 PF13549.6 gi|156938203|ref|YP_001435999.1| - 0.002 17.6 0.0 0.016 14.7 0.0 2.4 2 0 0 2 2 2 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|156938203|ref|YP_001435999.1| - 0.013 14.8 0.0 2.8 7.1 0.0 2.5 2 1 0 2 2 2 0 Sugar-transfer associated ATP-grasp Shikimate_DH PF01488.20 gi|156938203|ref|YP_001435999.1| - 0.014 15.5 0.0 0.026 14.6 0.0 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase RmlD_sub_bind PF04321.17 gi|156938203|ref|YP_001435999.1| - 0.017 14.2 0.1 0.029 13.5 0.1 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain ATPgrasp_YheCD PF14398.6 gi|156938203|ref|YP_001435999.1| - 0.027 13.7 0.0 0.089 12.0 0.0 1.7 2 0 0 2 2 2 0 YheC/D like ATP-grasp Pyr_redox PF00070.27 gi|156938203|ref|YP_001435999.1| - 0.034 14.7 0.3 1.3 9.6 0.2 3.1 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase ATP-grasp_4 PF13535.6 gi|156938203|ref|YP_001435999.1| - 0.051 13.2 0.0 0.16 11.5 0.0 1.9 1 1 0 1 1 1 0 ATP-grasp domain Pyr_redox_2 PF07992.14 gi|156938203|ref|YP_001435999.1| - 0.062 12.5 0.2 0.29 10.3 0.1 2.1 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase PurK_C PF17769.1 gi|156938203|ref|YP_001435999.1| - 0.063 13.0 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Phosphoribosylaminoimidazole carboxylase C-terminal domain Fibrillarin PF01269.17 gi|156938204|ref|YP_001436000.1| - 4.5e-104 346.5 0.0 5.2e-104 346.3 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin PCMT PF01135.19 gi|156938204|ref|YP_001436000.1| - 0.0015 18.3 0.0 0.0026 17.5 0.0 1.4 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|156938204|ref|YP_001436000.1| - 0.12 12.4 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 FtsJ-like methyltransferase GCD14 PF08704.10 gi|156938204|ref|YP_001436000.1| - 0.15 11.7 0.0 0.21 11.2 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF2417 PF10329.9 gi|156938205|ref|YP_001436001.1| - 0.06 12.8 0.2 0.17 11.2 0.1 1.7 2 0 0 2 2 2 0 Region of unknown function (DUF2417) Radical_SAM PF04055.21 gi|156938206|ref|YP_001436002.1| - 2.2e-25 90.0 0.0 7.6e-25 88.2 0.0 1.9 1 1 1 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|156938206|ref|YP_001436002.1| - 9.3e-18 64.1 0.2 1.6e-17 63.3 0.2 1.4 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|156938206|ref|YP_001436002.1| - 0.00018 21.4 0.1 0.00038 20.4 0.1 1.6 1 0 0 1 1 1 1 TRAM domain Rep_fac-A_3 PF08661.11 gi|156938206|ref|YP_001436002.1| - 0.049 14.0 0.0 8.7 6.7 0.0 2.4 2 0 0 2 2 2 0 Replication factor A protein 3 TRAM_2 PF18693.1 gi|156938206|ref|YP_001436002.1| - 0.069 13.3 0.1 0.32 11.2 0.0 2.2 2 1 0 2 2 2 0 TRAM domain Thy1 PF02511.15 gi|156938209|ref|YP_001436005.1| - 3.1e-49 167.4 0.0 3.7e-49 167.1 0.0 1.1 1 0 0 1 1 1 1 Thymidylate synthase complementing protein DUF2615 PF11027.8 gi|156938209|ref|YP_001436005.1| - 0.031 14.4 0.2 0.054 13.6 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2615) zf-C3HC4_3 PF13920.6 gi|156938210|ref|YP_001436006.1| - 0.028 14.3 0.1 0.028 14.3 0.1 2.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 gi|156938210|ref|YP_001436006.1| - 0.05 13.4 7.7 0.36 10.6 0.5 2.2 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-TFIIB PF13453.6 gi|156938210|ref|YP_001436006.1| - 0.072 12.4 2.5 3.6 7.0 0.3 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger Zn_ribbon_SprT PF17283.2 gi|156938210|ref|YP_001436006.1| - 0.28 11.1 8.5 2.5 8.1 0.2 2.5 2 1 0 2 2 2 0 SprT-like zinc ribbon domain HypA PF01155.19 gi|156938210|ref|YP_001436006.1| - 0.48 10.5 2.2 0.8 9.7 2.2 1.4 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_5 PF13719.6 gi|156938210|ref|YP_001436006.1| - 0.5 10.2 4.5 6.5 6.6 0.0 3.0 3 0 0 3 3 3 0 zinc-ribbon domain zinc_ribbon_10 PF10058.9 gi|156938210|ref|YP_001436006.1| - 1.2 9.0 6.6 1.9 8.3 5.4 1.9 1 1 1 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein FANCL_C PF11793.8 gi|156938210|ref|YP_001436006.1| - 2.1 8.6 6.5 1.1 9.4 0.6 2.2 1 1 1 2 2 2 0 FANCL C-terminal domain Rad50_zn_hook PF04423.14 gi|156938210|ref|YP_001436006.1| - 2.4 8.0 5.7 2.3 8.1 0.9 2.1 2 0 0 2 2 2 0 Rad50 zinc hook motif RNase_P_Rpp14 PF01900.19 gi|156938212|ref|YP_001436008.1| - 5.7e-11 42.6 0.0 9.7e-11 41.8 0.0 1.3 1 0 0 1 1 1 1 Rpp14/Pop5 family SHD1 PF03983.12 gi|156938212|ref|YP_001436008.1| - 0.048 13.5 0.2 0.11 12.4 0.1 1.6 2 0 0 2 2 2 0 SLA1 homology domain 1, SHD1 HTH_34 PF13601.6 gi|156938213|ref|YP_001436009.1| - 2.2e-14 53.4 0.0 2.6e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|156938213|ref|YP_001436009.1| - 7.2e-09 35.4 0.0 1.3e-08 34.5 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|156938213|ref|YP_001436009.1| - 4.5e-07 29.3 0.0 6.9e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding PadR PF03551.14 gi|156938213|ref|YP_001436009.1| - 4e-05 23.5 0.0 6.9e-05 22.7 0.0 1.4 2 0 0 2 2 1 1 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|156938213|ref|YP_001436009.1| - 0.00011 22.0 0.0 0.00024 20.9 0.0 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|156938213|ref|YP_001436009.1| - 0.00015 21.7 0.0 0.00026 21.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|156938213|ref|YP_001436009.1| - 0.00052 19.8 0.0 0.0008 19.2 0.0 1.3 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|156938213|ref|YP_001436009.1| - 0.0017 18.2 0.0 0.0029 17.5 0.0 1.4 2 0 0 2 2 2 1 MarR family HTH_11 PF08279.12 gi|156938213|ref|YP_001436009.1| - 0.005 16.8 0.0 0.0086 16.0 0.0 1.4 1 0 0 1 1 1 1 HTH domain TFIIE_alpha PF02002.17 gi|156938213|ref|YP_001436009.1| - 0.01 15.7 0.0 0.019 14.9 0.0 1.3 1 1 0 1 1 1 0 TFIIE alpha subunit FaeA PF04703.12 gi|156938213|ref|YP_001436009.1| - 0.01 16.1 0.0 0.015 15.7 0.0 1.2 1 0 0 1 1 1 0 FaeA-like protein LexA_DNA_bind PF01726.16 gi|156938213|ref|YP_001436009.1| - 0.011 15.5 0.0 0.02 14.7 0.0 1.5 1 0 0 1 1 1 0 LexA DNA binding domain Fe_dep_repress PF01325.19 gi|156938213|ref|YP_001436009.1| - 0.015 15.5 0.0 0.028 14.6 0.0 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_DeoR PF08220.12 gi|156938213|ref|YP_001436009.1| - 0.043 13.6 0.1 1.1 9.0 0.0 2.3 2 1 0 2 2 2 0 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|156938213|ref|YP_001436009.1| - 0.049 14.0 0.0 0.091 13.1 0.0 1.4 2 0 0 2 2 1 0 Transcriptional regulator HTH_40 PF14493.6 gi|156938213|ref|YP_001436009.1| - 0.056 13.9 0.0 0.065 13.7 0.0 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain BLACT_WH PF17778.1 gi|156938213|ref|YP_001436009.1| - 0.08 12.9 0.1 0.13 12.2 0.1 1.4 1 0 0 1 1 1 0 Beta-lactamase associated winged helix domain HTH_IclR PF09339.10 gi|156938213|ref|YP_001436009.1| - 0.16 11.8 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain DUF21 PF01595.20 gi|156938214|ref|YP_001436010.1| - 0.34 10.6 7.3 1.2 8.8 2.4 2.2 2 0 0 2 2 2 0 Cyclin M transmembrane N-terminal domain HEPN PF05168.14 gi|156938216|ref|YP_001436012.1| - 0.00021 21.4 0.1 0.0045 17.1 0.1 2.0 2 0 0 2 2 2 2 HEPN domain Lyase_1 PF00206.20 gi|156938217|ref|YP_001436013.1| - 1.8e-39 136.0 0.0 4.2e-39 134.8 0.0 1.6 2 0 0 2 2 2 1 Lyase ASL_C2 PF14698.6 gi|156938217|ref|YP_001436013.1| - 2.5e-08 34.5 0.1 1.1e-07 32.5 0.1 2.1 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal Peptidase_M41 PF01434.18 gi|156938217|ref|YP_001436013.1| - 0.0082 16.0 0.0 0.021 14.7 0.0 1.6 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 gi|156938218|ref|YP_001436014.1| - 6.4e-101 334.0 0.0 2.2e-51 173.7 0.0 2.7 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|156938218|ref|YP_001436014.1| - 3.5e-40 135.6 0.3 1.3e-20 72.9 0.0 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|156938218|ref|YP_001436014.1| - 4.2e-32 110.2 0.5 3.6e-31 107.2 1.3 2.1 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.17 gi|156938218|ref|YP_001436014.1| - 2.8e-16 59.0 0.7 1.1e-15 57.1 0.4 2.3 3 0 0 3 3 1 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|156938218|ref|YP_001436014.1| - 3.9e-16 59.2 0.1 2e-08 34.1 0.0 3.0 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|156938218|ref|YP_001436014.1| - 4.7e-16 59.4 0.0 1.7e-07 31.5 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|156938218|ref|YP_001436014.1| - 5.4e-14 52.9 0.2 1.9e-06 28.4 0.0 4.0 3 1 0 4 4 3 2 AAA ATPase domain AAA_5 PF07728.14 gi|156938218|ref|YP_001436014.1| - 8.7e-14 51.7 1.3 8.2e-06 25.9 0.1 3.6 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|156938218|ref|YP_001436014.1| - 2e-11 44.3 0.6 0.0059 16.9 0.0 4.0 2 2 2 4 4 4 2 AAA domain AAA_33 PF13671.6 gi|156938218|ref|YP_001436014.1| - 3e-11 43.7 0.0 1.3e-05 25.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 gi|156938218|ref|YP_001436014.1| - 3.1e-11 43.4 0.0 5e-05 23.3 0.0 2.7 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.13 gi|156938218|ref|YP_001436014.1| - 4.3e-11 42.6 0.1 8.2e-05 22.0 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain Vps4_C PF09336.10 gi|156938218|ref|YP_001436014.1| - 4.8e-11 42.5 1.0 1.8e-05 24.6 0.0 3.1 3 0 0 3 3 2 2 Vps4 C terminal oligomerisation domain AAA_18 PF13238.6 gi|156938218|ref|YP_001436014.1| - 9.1e-09 36.0 0.0 0.0018 18.8 0.0 3.1 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|156938218|ref|YP_001436014.1| - 3.6e-08 33.4 0.1 0.01 15.6 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|156938218|ref|YP_001436014.1| - 5.7e-08 32.4 0.8 0.0039 16.6 0.1 2.9 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|156938218|ref|YP_001436014.1| - 1.7e-07 31.7 0.0 0.0014 18.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|156938218|ref|YP_001436014.1| - 2.8e-07 30.9 0.0 0.0057 17.0 0.0 2.8 2 0 0 2 2 2 2 RNA helicase AAA_24 PF13479.6 gi|156938218|ref|YP_001436014.1| - 6.2e-07 29.3 0.0 0.0091 15.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|156938218|ref|YP_001436014.1| - 1.5e-06 28.1 0.1 0.23 11.2 0.0 3.8 2 2 0 2 2 2 2 Sigma-54 interaction domain DUF815 PF05673.13 gi|156938218|ref|YP_001436014.1| - 2.5e-06 26.9 0.0 0.026 13.7 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|156938218|ref|YP_001436014.1| - 3.1e-06 26.9 3.8 0.17 11.5 0.0 4.5 4 1 0 4 4 4 2 AAA domain AAA_7 PF12775.7 gi|156938218|ref|YP_001436014.1| - 4.3e-06 26.3 0.0 0.075 12.5 0.0 2.5 2 1 0 2 2 2 2 P-loop containing dynein motor region TsaE PF02367.17 gi|156938218|ref|YP_001436014.1| - 1e-05 25.5 0.0 0.031 14.3 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|156938218|ref|YP_001436014.1| - 1.1e-05 26.0 0.0 0.27 11.8 0.0 2.5 2 0 0 2 2 2 2 ABC transporter Zeta_toxin PF06414.12 gi|156938218|ref|YP_001436014.1| - 1.2e-05 24.6 0.0 0.18 11.1 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_3 PF07726.11 gi|156938218|ref|YP_001436014.1| - 2.5e-05 24.1 0.0 0.098 12.5 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|156938218|ref|YP_001436014.1| - 2.5e-05 24.3 0.5 0.067 13.1 0.0 3.9 3 2 0 3 3 3 1 ATPase domain predominantly from Archaea ATPase PF06745.13 gi|156938218|ref|YP_001436014.1| - 4e-05 23.1 3.1 0.46 9.8 0.1 4.1 4 1 1 5 5 5 2 KaiC Bac_DnaA PF00308.18 gi|156938218|ref|YP_001436014.1| - 5e-05 23.2 0.0 0.011 15.5 0.0 3.0 2 1 0 2 2 2 1 Bacterial dnaA protein PhoH PF02562.16 gi|156938218|ref|YP_001436014.1| - 5.7e-05 22.7 0.8 0.16 11.4 0.1 2.6 2 0 0 2 2 2 2 PhoH-like protein Parvo_NS1 PF01057.17 gi|156938218|ref|YP_001436014.1| - 8e-05 21.9 0.2 0.024 13.7 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 NACHT PF05729.12 gi|156938218|ref|YP_001436014.1| - 0.00019 21.4 1.4 0.079 12.9 0.1 3.4 4 0 0 4 4 3 1 NACHT domain DUF2075 PF09848.9 gi|156938218|ref|YP_001436014.1| - 0.00046 19.5 0.0 0.19 11.0 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|156938218|ref|YP_001436014.1| - 0.00072 19.3 0.3 0.82 9.3 0.0 2.8 3 0 0 3 3 2 1 AAA domain AAA_19 PF13245.6 gi|156938218|ref|YP_001436014.1| - 0.00087 19.6 0.8 2.2 8.6 0.0 3.0 2 1 0 2 2 2 1 AAA domain AAA_11 PF13086.6 gi|156938218|ref|YP_001436014.1| - 0.00095 19.0 0.0 0.79 9.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.6 gi|156938218|ref|YP_001436014.1| - 0.0013 19.2 0.0 1 9.8 0.0 3.1 2 0 0 2 2 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|156938218|ref|YP_001436014.1| - 0.0013 18.8 0.0 0.81 9.8 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain AFG1_ATPase PF03969.16 gi|156938218|ref|YP_001436014.1| - 0.0048 15.8 0.0 1.3 7.9 0.0 2.7 3 0 0 3 3 3 1 AFG1-like ATPase Guanylate_kin PF00625.21 gi|156938218|ref|YP_001436014.1| - 0.0072 16.0 0.4 7.7 6.2 0.0 3.9 2 2 2 4 4 4 0 Guanylate kinase Molydop_binding PF01568.21 gi|156938218|ref|YP_001436014.1| - 0.0075 16.3 0.1 0.029 14.4 0.1 2.0 1 1 0 1 1 1 1 Molydopterin dinucleotide binding domain Rad17 PF03215.15 gi|156938218|ref|YP_001436014.1| - 0.011 15.6 0.0 1.8 8.4 0.0 2.7 2 1 0 2 2 2 0 Rad17 P-loop domain TniB PF05621.11 gi|156938218|ref|YP_001436014.1| - 0.012 15.0 0.0 3.1 7.1 0.0 3.5 4 0 0 4 4 4 0 Bacterial TniB protein AAA_6 PF12774.7 gi|156938218|ref|YP_001436014.1| - 0.013 14.5 0.0 0.097 11.6 0.0 2.1 2 0 0 2 2 2 0 Hydrolytic ATP binding site of dynein motor region NB-ARC PF00931.22 gi|156938218|ref|YP_001436014.1| - 0.014 14.6 0.0 4 6.6 0.0 2.5 2 0 0 2 2 2 0 NB-ARC domain Viral_helicase1 PF01443.18 gi|156938218|ref|YP_001436014.1| - 0.018 14.8 0.0 1.4 8.6 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|156938218|ref|YP_001436014.1| - 0.025 13.6 0.0 4.6 6.2 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein ResIII PF04851.15 gi|156938218|ref|YP_001436014.1| - 0.028 14.4 0.0 9.8 6.1 0.0 2.6 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Cytidylate_kin PF02224.18 gi|156938218|ref|YP_001436014.1| - 0.039 13.7 0.2 2.2 8.0 0.0 2.6 3 0 0 3 3 2 0 Cytidylate kinase Ribosomal_L10 PF00466.20 gi|156938218|ref|YP_001436014.1| - 0.045 13.9 0.1 0.16 12.2 0.1 1.9 1 0 0 1 1 1 0 Ribosomal protein L10 PduV-EutP PF10662.9 gi|156938218|ref|YP_001436014.1| - 0.048 13.4 0.0 4.7 6.9 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NTPase_1 PF03266.15 gi|156938218|ref|YP_001436014.1| - 0.053 13.4 3.6 19 5.1 0.0 4.1 3 2 1 4 4 3 0 NTPase IPT PF01745.16 gi|156938218|ref|YP_001436014.1| - 0.062 12.7 0.2 1.9 7.8 0.0 2.3 2 0 0 2 2 2 0 Isopentenyl transferase AAA_29 PF13555.6 gi|156938218|ref|YP_001436014.1| - 0.087 12.6 0.0 17 5.3 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain SKI PF01202.22 gi|156938218|ref|YP_001436014.1| - 0.088 12.9 0.0 3.6 7.7 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase cobW PF02492.19 gi|156938218|ref|YP_001436014.1| - 0.13 11.8 0.1 23 4.5 0.0 2.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain B5 PF03484.15 gi|156938218|ref|YP_001436014.1| - 0.15 12.3 0.2 0.88 9.9 0.2 2.4 1 1 0 1 1 1 0 tRNA synthetase B5 domain KTI12 PF08433.10 gi|156938218|ref|YP_001436014.1| - 0.16 11.4 0.0 7.7 5.9 0.0 2.9 3 0 0 3 3 3 0 Chromatin associated protein KTI12 eIF-1a PF01176.19 gi|156938218|ref|YP_001436014.1| - 0.26 11.1 1.8 3.4 7.6 0.1 2.5 2 0 0 2 2 2 0 Translation initiation factor 1A / IF-1 Wyosine_form PF08608.12 gi|156938220|ref|YP_001436016.1| - 2.9e-25 88.4 0.1 5.4e-25 87.5 0.1 1.5 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|156938220|ref|YP_001436016.1| - 5.5e-21 75.6 0.0 1.9e-20 73.9 0.0 2.0 2 1 0 2 2 2 1 Radical SAM superfamily GFRP PF06399.13 gi|156938220|ref|YP_001436016.1| - 0.074 12.9 0.0 0.27 11.2 0.0 1.9 1 0 0 1 1 1 0 GTP cyclohydrolase I feedback regulatory protein (GFRP) PQQ_3 PF13570.6 gi|156938221|ref|YP_001436017.1| - 0.0078 16.7 0.2 2.8 8.5 0.0 3.6 3 0 0 3 3 3 1 PQQ-like domain CPSF_A PF03178.15 gi|156938221|ref|YP_001436017.1| - 0.078 12.3 0.0 0.52 9.6 0.0 2.1 1 1 1 2 2 2 0 CPSF A subunit region tRNA-synt_2 PF00152.20 gi|156938222|ref|YP_001436018.1| - 1.3e-79 267.5 0.0 1.6e-79 267.2 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|156938222|ref|YP_001436018.1| - 1.6e-16 60.0 0.3 2.9e-16 59.2 0.3 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|156938222|ref|YP_001436018.1| - 0.1 12.0 0.0 15 5.0 0.0 2.4 2 0 0 2 2 2 0 tRNA synthetases class II core domain (F) DAHP_synth_1 PF00793.20 gi|156938223|ref|YP_001436019.1| - 2.8e-77 259.3 0.0 3.8e-77 258.8 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NeuB PF03102.14 gi|156938223|ref|YP_001436019.1| - 5.8e-10 39.0 0.0 1.2e-09 38.0 0.0 1.4 1 1 0 1 1 1 1 NeuB family RNase_HII PF01351.18 gi|156938224|ref|YP_001436020.1| - 7.6e-42 143.4 0.1 8.7e-42 143.2 0.1 1.0 1 0 0 1 1 1 1 Ribonuclease HII DUF2434 PF10361.9 gi|156938224|ref|YP_001436020.1| - 0.059 12.3 0.0 0.079 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2434) MobB PF03205.14 gi|156938226|ref|YP_001436022.1| - 8.1e-17 61.4 0.2 1e-16 61.1 0.2 1.1 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_14 PF13173.6 gi|156938226|ref|YP_001436022.1| - 4.4e-05 23.5 0.0 5.4e-05 23.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 gi|156938226|ref|YP_001436022.1| - 0.00094 19.2 0.1 0.0012 18.8 0.1 1.3 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea SRPRB PF09439.10 gi|156938226|ref|YP_001436022.1| - 0.028 13.8 0.0 0.038 13.4 0.0 1.2 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_18 PF13238.6 gi|156938226|ref|YP_001436022.1| - 0.03 14.9 0.1 0.04 14.5 0.1 1.4 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|156938226|ref|YP_001436022.1| - 0.032 14.2 0.2 0.04 13.8 0.2 1.3 1 0 0 1 1 1 0 NTPase RNA_helicase PF00910.22 gi|156938226|ref|YP_001436022.1| - 0.045 14.1 0.0 0.07 13.5 0.0 1.3 1 0 0 1 1 1 0 RNA helicase MMR_HSR1 PF01926.23 gi|156938226|ref|YP_001436022.1| - 0.052 13.6 0.0 0.06 13.4 0.0 1.3 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_33 PF13671.6 gi|156938226|ref|YP_001436022.1| - 0.056 13.6 0.0 0.082 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_35 PF14516.6 gi|156938226|ref|YP_001436022.1| - 0.08 11.8 0.1 0.08 11.8 0.1 1.6 2 0 0 2 2 2 0 AAA-like domain AAA_22 PF13401.6 gi|156938226|ref|YP_001436022.1| - 0.1 12.9 0.1 0.15 12.4 0.1 1.3 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|156938226|ref|YP_001436022.1| - 0.11 12.8 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain cobW PF02492.19 gi|156938226|ref|YP_001436022.1| - 0.13 11.9 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|156938226|ref|YP_001436022.1| - 0.16 11.7 0.1 1.2 8.8 0.1 2.0 1 1 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ATP_bind_1 PF03029.17 gi|156938226|ref|YP_001436022.1| - 0.22 11.3 0.0 0.3 10.8 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein YdjM PF04307.14 gi|156938227|ref|YP_001436023.1| - 1.3e-15 57.1 9.0 1.3e-14 53.9 9.0 1.9 1 1 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|156938227|ref|YP_001436023.1| - 0.0001 22.1 1.2 0.0027 17.4 0.1 2.0 2 0 0 2 2 2 2 Domain of unknown function (DUF4184) Zn_dep_PLPC PF00882.18 gi|156938227|ref|YP_001436023.1| - 0.072 13.1 0.1 0.1 12.5 0.1 1.4 1 1 0 1 1 1 0 Zinc dependent phospholipase C GHMP_kinases_C PF08544.13 gi|156938228|ref|YP_001436024.1| - 0.00069 19.9 0.0 0.007 16.7 0.0 2.2 2 0 0 2 2 2 1 GHMP kinases C terminal GHMP_kinases_N PF00288.26 gi|156938228|ref|YP_001436024.1| - 0.00088 19.5 0.2 0.00088 19.5 0.2 1.7 2 0 0 2 2 2 1 GHMP kinases N terminal domain Glycos_transf_3 PF00591.21 gi|156938229|ref|YP_001436025.1| - 1.5e-72 244.2 0.0 2.1e-72 243.8 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|156938229|ref|YP_001436025.1| - 1.2e-13 50.6 0.0 2.5e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Ignicoccus_hospitalis_KIN4_I_uid58365/NC_009776.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Ignicoccus_hospitalis_KIN4_I_uid58365/NC_009776.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Ignicoccus_hospitalis_KIN4_I_uid58365/NC_009776.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Ignicoccus_hospitalis_KIN4_I_uid58365/NC_009776.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 11:00:01 2019 # [ok]