#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|429216256|ref|YP_007174246.1|	-	2.1e-18	65.8	0.5	6.4e-18	64.2	0.1	2.0	2	0	0	2	2	2	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|429216256|ref|YP_007174246.1|	-	3.3e-12	46.6	0.0	7.4e-12	45.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|429216256|ref|YP_007174246.1|	-	8.9e-10	38.8	0.4	5.4e-08	33.0	0.3	3.1	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|429216256|ref|YP_007174246.1|	-	2e-08	34.5	0.1	8.2e-08	32.5	0.1	2.1	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Bac_DnaA	PF00308.13	gi|429216256|ref|YP_007174246.1|	-	2.3e-06	27.4	0.4	0.05	13.2	0.1	2.2	2	0	0	2	2	2	2	Bacterial	dnaA	protein
Arch_ATPase	PF01637.13	gi|429216256|ref|YP_007174246.1|	-	1e-05	25.3	4.8	2.9e-05	23.8	1.8	2.4	1	1	1	2	2	2	1	Archaeal	ATPase
DEAD	PF00270.24	gi|429216256|ref|YP_007174246.1|	-	8.1e-05	22.1	0.4	0.018	14.5	0.0	2.7	2	1	1	3	3	3	2	DEAD/DEAH	box	helicase
AAA_32	PF13654.1	gi|429216256|ref|YP_007174246.1|	-	0.0015	17.3	1.4	0.032	12.8	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
PIF1	PF05970.9	gi|429216256|ref|YP_007174246.1|	-	0.0078	15.2	0.0	0.018	13.9	0.0	1.7	1	1	0	1	1	1	1	PIF1-like	helicase
AAA_18	PF13238.1	gi|429216256|ref|YP_007174246.1|	-	0.012	15.8	2.6	0.054	13.7	0.0	3.0	4	1	0	4	4	3	0	AAA	domain
KAP_NTPase	PF07693.9	gi|429216256|ref|YP_007174246.1|	-	0.016	14.1	0.0	1.9	7.4	0.0	2.3	2	0	0	2	2	2	0	KAP	family	P-loop	domain
T2SE	PF00437.15	gi|429216256|ref|YP_007174246.1|	-	0.018	13.9	0.1	0.055	12.3	0.0	1.8	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.17	gi|429216256|ref|YP_007174246.1|	-	0.027	13.3	0.1	0.05	12.4	0.0	1.5	2	0	0	2	2	2	0	NB-ARC	domain
AAA_17	PF13207.1	gi|429216256|ref|YP_007174246.1|	-	0.033	15.0	2.9	0.099	13.4	1.3	2.6	2	1	0	2	2	1	0	AAA	domain
DUF2075	PF09848.4	gi|429216256|ref|YP_007174246.1|	-	0.036	13.0	0.0	0.049	12.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|429216256|ref|YP_007174246.1|	-	0.044	13.1	0.0	2	7.8	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF815	PF05673.8	gi|429216256|ref|YP_007174246.1|	-	0.065	12.1	0.0	0.32	9.8	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
NTPase_1	PF03266.10	gi|429216256|ref|YP_007174246.1|	-	0.095	12.4	1.0	0.46	10.1	0.7	2.2	1	1	0	1	1	1	0	NTPase
Sigma54_activat	PF00158.21	gi|429216256|ref|YP_007174246.1|	-	0.12	11.8	0.0	0.32	10.4	0.0	1.7	2	0	0	2	2	2	0	Sigma-54	interaction	domain
DUF99	PF01949.11	gi|429216257|ref|YP_007174247.1|	-	4.8e-36	123.6	0.0	6e-36	123.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Hydrolase_3	PF08282.7	gi|429216257|ref|YP_007174247.1|	-	0.022	14.3	0.1	0.029	13.9	0.1	1.3	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Lactamase_B	PF00753.22	gi|429216258|ref|YP_007174248.1|	-	1.1e-19	70.8	0.4	1.6e-19	70.3	0.3	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|429216258|ref|YP_007174248.1|	-	6.8e-05	22.4	0.3	9.6e-05	22.0	0.2	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
pRN1_helical	PF13010.1	gi|429216258|ref|YP_007174248.1|	-	0.0016	18.0	0.0	0.0034	16.9	0.0	1.5	1	0	0	1	1	1	1	Primase	helical	domain
Cren7	PF11520.3	gi|429216259|ref|YP_007174249.1|	-	1.1e-23	82.6	2.7	1.1e-23	82.5	1.9	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
YL1_C	PF08265.6	gi|429216259|ref|YP_007174249.1|	-	0.12	12.0	0.1	4.2	7.0	0.0	2.2	2	0	0	2	2	2	0	YL1	nuclear	protein	C-terminal	domain
zf-LITAF-like	PF10601.4	gi|429216260|ref|YP_007174250.1|	-	0.0063	16.3	0.6	0.0063	16.3	0.4	2.0	1	1	1	2	2	2	1	LITAF-like	zinc	ribbon	domain
DUF3797	PF12677.2	gi|429216260|ref|YP_007174250.1|	-	0.019	14.5	6.8	0.65	9.6	0.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Cys_rich_KTR	PF14205.1	gi|429216260|ref|YP_007174250.1|	-	0.031	13.7	8.2	0.1	12.0	1.9	2.0	1	1	1	2	2	2	0	Cysteine-rich	KTR
HypA	PF01155.14	gi|429216260|ref|YP_007174250.1|	-	0.036	13.7	0.4	0.04	13.5	0.3	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Baculo_LEF5_C	PF11792.3	gi|429216260|ref|YP_007174250.1|	-	0.06	12.7	2.8	0.074	12.4	0.1	2.0	2	0	0	2	2	2	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
Ribosomal_L33	PF00471.15	gi|429216260|ref|YP_007174250.1|	-	0.067	13.4	6.8	0.57	10.4	2.5	2.1	2	0	0	2	2	2	0	Ribosomal	protein	L33
CK_II_beta	PF01214.13	gi|429216260|ref|YP_007174250.1|	-	0.089	12.2	0.9	0.089	12.2	0.6	1.0	1	0	0	1	1	1	0	Casein	kinase	II	regulatory	subunit
SprT-like	PF10263.4	gi|429216260|ref|YP_007174250.1|	-	0.1	12.2	1.0	0.11	12.1	0.7	1.0	1	0	0	1	1	1	0	SprT-like	family
DUF4379	PF14311.1	gi|429216260|ref|YP_007174250.1|	-	0.15	11.9	3.1	0.3	10.9	2.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
FANCL_C	PF11793.3	gi|429216260|ref|YP_007174250.1|	-	0.18	11.7	2.4	0.23	11.4	1.7	1.2	1	0	0	1	1	1	0	FANCL	C-terminal	domain
DZR	PF12773.2	gi|429216260|ref|YP_007174250.1|	-	0.34	10.7	2.4	1.3	8.8	1.7	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|429216260|ref|YP_007174250.1|	-	0.46	10.3	4.1	1.1	9.1	2.9	1.6	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF4451	PF14616.1	gi|429216260|ref|YP_007174250.1|	-	0.54	10.0	4.9	0.65	9.7	0.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4451)
Ribosomal_L44	PF00935.14	gi|429216260|ref|YP_007174250.1|	-	0.8	9.7	3.7	1.5	8.8	0.3	2.0	1	1	1	2	2	2	0	Ribosomal	protein	L44
zinc_ribbon_5	PF13719.1	gi|429216260|ref|YP_007174250.1|	-	0.83	9.2	6.5	0.36	10.4	0.7	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|429216260|ref|YP_007174250.1|	-	1.6	8.0	5.1	6.1	6.2	3.4	1.9	1	1	1	2	2	2	0	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|429216260|ref|YP_007174250.1|	-	1.7	8.5	5.0	8.8	6.2	0.6	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|429216260|ref|YP_007174250.1|	-	1.8	8.2	7.6	3.6	7.3	1.5	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_2	PF13240.1	gi|429216260|ref|YP_007174250.1|	-	2.2	7.8	6.9	1.8	8.1	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429216260|ref|YP_007174250.1|	-	4.9	6.9	8.6	0.84	9.3	1.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|429216260|ref|YP_007174250.1|	-	6.2	6.9	6.8	4.2	7.4	0.6	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
tRNA-Thr_ED	PF08915.6	gi|429216261|ref|YP_007174251.1|	-	2.5e-37	127.9	0.0	5.3e-37	126.8	0.0	1.6	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|429216261|ref|YP_007174251.1|	-	1.8e-22	79.0	0.1	9.3e-22	76.7	0.0	2.1	2	0	0	2	2	2	1	Anticodon	binding	domain
Rad51	PF08423.6	gi|429216262|ref|YP_007174252.1|	-	2.8e-95	318.0	0.0	3.4e-95	317.8	0.0	1.1	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|429216262|ref|YP_007174252.1|	-	2.4e-13	49.9	0.0	3.7e-13	49.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
HHH_5	PF14520.1	gi|429216262|ref|YP_007174252.1|	-	4.8e-13	49.0	0.1	2.2e-12	46.9	0.0	2.1	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
RecA	PF00154.16	gi|429216262|ref|YP_007174252.1|	-	5.4e-12	45.4	0.0	7.6e-12	44.9	0.0	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|429216262|ref|YP_007174252.1|	-	3.8e-11	42.5	0.0	5.9e-11	41.9	0.0	1.3	1	0	0	1	1	1	1	KaiC
HHH_2	PF12826.2	gi|429216262|ref|YP_007174252.1|	-	4.5e-06	26.4	0.1	2.2e-05	24.2	0.0	2.1	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|429216262|ref|YP_007174252.1|	-	6.8e-06	25.4	0.1	0.00082	18.9	0.0	2.7	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
AAA_22	PF13401.1	gi|429216262|ref|YP_007174252.1|	-	1.2e-05	25.4	0.0	2.4e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Cdd1	PF11731.3	gi|429216262|ref|YP_007174252.1|	-	4.4e-05	23.3	0.0	0.00011	22.0	0.0	1.7	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_18	PF13238.1	gi|429216262|ref|YP_007174252.1|	-	0.00023	21.4	0.0	0.00044	20.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DNA_pol_lambd_f	PF10391.4	gi|429216262|ref|YP_007174252.1|	-	0.0005	19.5	0.0	0.0035	16.8	0.0	2.4	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
IMS_HHH	PF11798.3	gi|429216262|ref|YP_007174252.1|	-	0.0022	17.9	0.0	0.0049	16.8	0.0	1.7	1	0	0	1	1	1	1	IMS	family	HHH	motif
AAA	PF00004.24	gi|429216262|ref|YP_007174252.1|	-	0.02	15.1	0.0	0.056	13.6	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HHH_3	PF12836.2	gi|429216262|ref|YP_007174252.1|	-	0.024	14.5	0.0	7.9	6.5	0.0	2.5	1	1	1	2	2	2	0	Helix-hairpin-helix	motif
Sigma70_r3	PF04539.11	gi|429216262|ref|YP_007174252.1|	-	0.042	13.7	0.1	7.2	6.5	0.0	2.5	2	0	0	2	2	2	0	Sigma-70	region	3
5_3_exonuc	PF01367.15	gi|429216262|ref|YP_007174252.1|	-	0.047	13.9	0.0	0.13	12.5	0.0	1.7	1	0	0	1	1	1	0	5'-3'	exonuclease,	C-terminal	SAM	fold
PhoH	PF02562.11	gi|429216262|ref|YP_007174252.1|	-	0.079	12.1	0.2	0.36	10.0	0.0	1.9	2	0	0	2	2	2	0	PhoH-like	protein
ABC_tran	PF00005.22	gi|429216262|ref|YP_007174252.1|	-	0.091	13.0	0.0	0.17	12.1	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
Peptidase_A24	PF01478.13	gi|429216263|ref|YP_007174253.1|	-	2.1e-08	34.2	12.2	4.2e-08	33.2	8.4	1.4	1	0	0	1	1	1	1	Type	IV	leader	peptidase	family
Arc_PepC_II	PF06847.6	gi|429216263|ref|YP_007174253.1|	-	0.00034	20.9	0.3	0.00034	20.9	0.2	2.6	3	1	0	3	3	3	1	Archaeal	Peptidase	A24	C-terminus	Type	II
HIT	PF01230.18	gi|429216264|ref|YP_007174254.1|	-	5.2e-13	49.3	0.0	8.1e-13	48.7	0.0	1.3	1	0	0	1	1	1	1	HIT	domain
CwfJ_C_1	PF04677.10	gi|429216264|ref|YP_007174254.1|	-	6.2e-09	35.5	0.0	8.5e-09	35.1	0.0	1.2	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DcpS_C	PF11969.3	gi|429216264|ref|YP_007174254.1|	-	6.4e-06	26.3	0.0	9.2e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
DHH	PF01368.15	gi|429216265|ref|YP_007174255.1|	-	5.1e-10	39.1	1.2	8.5e-10	38.4	0.9	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|429216265|ref|YP_007174255.1|	-	7.4e-08	31.9	0.6	1.8e-07	30.7	0.1	2.0	2	0	0	2	2	2	1	DHHA1	domain
DNA_pol3_theta	PF06440.6	gi|429216265|ref|YP_007174255.1|	-	0.012	15.1	0.0	3.1	7.4	0.0	2.5	2	0	0	2	2	2	0	DNA	polymerase	III,	theta	subunit
SRP54_N	PF02881.14	gi|429216265|ref|YP_007174255.1|	-	0.061	13.4	0.1	0.24	11.5	0.0	2.0	1	0	0	1	1	1	0	SRP54-type	protein,	helical	bundle	domain
Ribosomal_L38e	PF01781.13	gi|429216266|ref|YP_007174256.1|	-	1.5e-06	27.8	3.4	1.5e-06	27.8	2.3	1.8	1	1	1	2	2	2	1	Ribosomal	L38e	protein	family
CagX	PF03524.10	gi|429216266|ref|YP_007174256.1|	-	0.69	9.1	7.3	1	8.5	5.1	1.3	1	1	0	1	1	1	0	Conjugal	transfer	protein
Cellulose_synt	PF03552.9	gi|429216266|ref|YP_007174256.1|	-	7.4	4.7	8.9	8.7	4.4	6.2	1.0	1	0	0	1	1	1	0	Cellulose	synthase
Neur_chan_memb	PF02932.11	gi|429216266|ref|YP_007174256.1|	-	8.2	6.2	6.9	8.4	6.1	4.8	1.2	1	0	0	1	1	1	0	Neurotransmitter-gated	ion-channel	transmembrane	region
CoA_trans	PF01144.18	gi|429216267|ref|YP_007174257.1|	-	4.3e-44	150.2	0.2	2.9e-37	127.9	0.0	3.0	2	1	0	2	2	2	2	Coenzyme	A	transferase
Hydrolase_3	PF08282.7	gi|429216268|ref|YP_007174258.1|	-	5.1e-24	85.2	0.1	1.7e-12	47.4	0.0	2.2	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|429216268|ref|YP_007174258.1|	-	2.8e-08	33.3	0.0	5.3e-08	32.4	0.0	1.4	2	0	0	2	2	2	1	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.21	gi|429216268|ref|YP_007174258.1|	-	0.00021	21.7	0.6	0.075	13.4	0.0	3.0	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|429216268|ref|YP_007174258.1|	-	0.0012	19.0	3.6	0.0015	18.7	0.1	2.4	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Beta-Casp	PF10996.3	gi|429216269|ref|YP_007174259.1|	-	1.9e-23	82.7	0.0	3.4e-23	81.9	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|429216269|ref|YP_007174259.1|	-	6.1e-16	58.6	0.5	4.9e-15	55.6	0.3	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|429216269|ref|YP_007174259.1|	-	4.5e-14	51.9	0.1	1.2e-13	50.6	0.0	1.8	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|429216269|ref|YP_007174259.1|	-	1.2e-12	47.7	1.1	5.3e-12	45.6	0.4	2.1	2	1	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|429216269|ref|YP_007174259.1|	-	1.7e-05	24.5	0.4	0.00064	19.4	0.0	2.4	1	1	1	2	2	2	1	Beta-lactamase	superfamily	domain
NAC	PF01849.13	gi|429216270|ref|YP_007174260.1|	-	3.1e-10	39.4	7.4	1.6e-09	37.0	1.8	2.5	1	1	2	3	3	3	1	NAC	domain
UBA	PF00627.26	gi|429216270|ref|YP_007174260.1|	-	1.9e-07	30.7	1.2	2.3e-07	30.4	0.2	1.6	2	0	0	2	2	2	1	UBA/TS-N	domain
CUE	PF02845.11	gi|429216270|ref|YP_007174260.1|	-	0.005	16.2	0.0	0.012	15.1	0.0	1.6	1	1	1	2	2	2	1	CUE	domain
SPT6_acidic	PF14632.1	gi|429216270|ref|YP_007174260.1|	-	0.046	13.8	1.3	0.046	13.8	0.9	1.5	1	1	0	2	2	2	0	Acidic	N-terminal	SPT6
Peptidase_C39	PF03412.10	gi|429216270|ref|YP_007174260.1|	-	0.11	12.2	0.6	0.68	9.7	0.4	2.3	1	1	0	1	1	1	0	Peptidase	C39	family
DUF2999	PF11212.3	gi|429216270|ref|YP_007174260.1|	-	0.47	10.5	3.2	5.7	7.0	0.1	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2999)
DUF2703	PF10865.3	gi|429216270|ref|YP_007174260.1|	-	0.74	9.7	3.5	6.3	6.7	0.4	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2703)
HTH_3	PF01381.17	gi|429216271|ref|YP_007174261.1|	-	1.6e-09	37.4	0.0	4.1e-07	29.7	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix
HTH_31	PF13560.1	gi|429216271|ref|YP_007174261.1|	-	2.2e-08	34.1	0.0	1.1e-07	31.9	0.0	2.0	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|429216271|ref|YP_007174261.1|	-	3.2e-07	30.2	0.0	1.7e-05	24.7	0.0	2.6	3	0	0	3	3	3	1	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|429216271|ref|YP_007174261.1|	-	0.013	15.2	0.0	0.36	10.6	0.0	2.9	2	1	0	2	2	2	0	MerR	HTH	family	regulatory	protein
HTH_37	PF13744.1	gi|429216271|ref|YP_007174261.1|	-	0.024	14.4	0.0	0.36	10.6	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|429216271|ref|YP_007174261.1|	-	0.059	13.2	0.0	2.5	8.0	0.0	2.6	2	0	0	2	2	2	0	NUMOD1	domain
DUF134	PF02001.11	gi|429216271|ref|YP_007174261.1|	-	0.073	12.9	0.0	0.43	10.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF134
TauE	PF01925.14	gi|429216272|ref|YP_007174262.1|	-	1.1e-37	129.7	25.9	1.3e-37	129.5	18.0	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
SdpI	PF13630.1	gi|429216272|ref|YP_007174262.1|	-	0.22	11.2	0.2	0.22	11.2	0.1	4.0	3	1	0	3	3	3	0	SdpI/YhfL	protein	family
IspA	PF04279.10	gi|429216272|ref|YP_007174262.1|	-	7.7	6.4	11.6	0.21	11.5	1.8	2.2	2	0	0	2	2	2	0	Intracellular	septation	protein	A
DUF1634	PF07843.6	gi|429216273|ref|YP_007174263.1|	-	2.1e-32	110.9	11.6	2.4e-32	110.6	8.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
DUF3810	PF12725.2	gi|429216273|ref|YP_007174263.1|	-	2	7.2	5.2	3.2	6.5	3.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
GP41	PF00517.12	gi|429216273|ref|YP_007174263.1|	-	6.4	6.2	10.4	2.3	7.7	1.3	2.2	1	1	1	2	2	2	0	Retroviral	envelope	protein
zf-CDGSH	PF09360.5	gi|429216274|ref|YP_007174264.1|	-	1.5e-13	50.3	0.9	2.3e-13	49.7	0.6	1.3	1	0	0	1	1	1	1	Iron-binding	zinc	finger	CDGSH	type
MORN_2	PF07661.8	gi|429216274|ref|YP_007174264.1|	-	0.13	12.4	0.2	0.36	10.9	0.1	1.8	1	0	0	1	1	1	0	MORN	repeat	variant
dUTPase	PF00692.14	gi|429216275|ref|YP_007174265.1|	-	9.2e-11	41.3	0.0	3.7e-10	39.3	0.0	1.9	2	0	0	2	2	2	1	dUTPase
DCD	PF06559.6	gi|429216275|ref|YP_007174265.1|	-	0.021	13.2	0.0	0.054	11.8	0.0	1.6	1	1	0	2	2	2	0	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
Carb_kinase	PF01256.12	gi|429216276|ref|YP_007174266.1|	-	0.01	15.1	0.0	0.016	14.4	0.0	1.3	1	0	0	1	1	1	0	Carbohydrate	kinase
Copper-bind	PF00127.15	gi|429216277|ref|YP_007174267.1|	-	0.00011	22.3	0.0	0.00031	20.8	0.0	1.7	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
SoxE	PF06525.6	gi|429216277|ref|YP_007174267.1|	-	0.033	13.4	15.4	0.11	11.7	10.6	2.1	1	1	0	1	1	1	0	Sulfocyanin	(SoxE)
Cu-oxidase_3	PF07732.10	gi|429216277|ref|YP_007174267.1|	-	0.087	12.5	2.2	0.9	9.2	0.6	2.4	2	0	0	2	2	2	0	Multicopper	oxidase
HpaB_N	PF11794.3	gi|429216278|ref|YP_007174268.1|	-	2e-72	243.7	1.0	2.5e-72	243.4	0.7	1.1	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|429216278|ref|YP_007174268.1|	-	2.1e-33	114.8	0.0	2.8e-33	114.5	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Acyl-CoA_dh_M	PF02770.14	gi|429216278|ref|YP_007174268.1|	-	0.0025	17.2	0.0	0.0052	16.2	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
DUF131	PF01998.12	gi|429216279|ref|YP_007174269.1|	-	1.6e-15	56.2	12.1	1.6e-15	56.2	8.4	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF423	PF04241.10	gi|429216279|ref|YP_007174269.1|	-	0.046	13.6	2.5	0.13	12.1	0.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF423)
DUF3955	PF13127.1	gi|429216279|ref|YP_007174269.1|	-	0.053	13.0	9.5	0.86	9.1	1.5	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
DUF3397	PF11877.3	gi|429216279|ref|YP_007174269.1|	-	0.26	11.2	9.9	0.32	10.9	6.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3397)
EI24	PF07264.6	gi|429216279|ref|YP_007174269.1|	-	0.37	10.2	7.4	0.43	9.9	5.1	1.0	1	0	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
IncA	PF04156.9	gi|429216279|ref|YP_007174269.1|	-	0.45	10.0	9.8	4.3	6.8	0.2	2.1	2	0	0	2	2	2	0	IncA	protein
UbiA	PF01040.13	gi|429216279|ref|YP_007174269.1|	-	1.7	7.7	8.6	2.1	7.4	6.0	1.2	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
DUF3899	PF13038.1	gi|429216279|ref|YP_007174269.1|	-	1.9	8.6	10.2	4.8	7.4	1.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3899)
Brr6_like_C_C	PF10104.4	gi|429216279|ref|YP_007174269.1|	-	2.3	7.7	7.5	0.52	9.8	0.3	2.0	2	0	0	2	2	2	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
Claudin_2	PF13903.1	gi|429216279|ref|YP_007174269.1|	-	3.4	7.3	9.3	24	4.5	6.3	1.9	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
Nucleos_tra2_N	PF01773.15	gi|429216279|ref|YP_007174269.1|	-	3.5	8.0	9.8	0.43	10.9	3.3	1.9	2	0	0	2	2	2	0	Na+	dependent	nucleoside	transporter	N-terminus
DUF898	PF05987.8	gi|429216279|ref|YP_007174269.1|	-	3.8	6.3	7.4	4.3	6.1	5.1	1.0	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF898)
Sigma_reg_N	PF13800.1	gi|429216279|ref|YP_007174269.1|	-	7.1	6.7	10.7	6.9	6.7	0.9	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
DUF2207	PF09972.4	gi|429216279|ref|YP_007174269.1|	-	8	4.9	11.2	9.1	4.7	7.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
YbjQ_1	PF01906.12	gi|429216280|ref|YP_007174270.1|	-	3.1e-35	120.7	0.9	3.5e-35	120.5	0.6	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
Peripla_BP_4	PF13407.1	gi|429216280|ref|YP_007174270.1|	-	0.0089	15.4	0.1	0.011	15.0	0.1	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
SeleniumBinding	PF11524.3	gi|429216280|ref|YP_007174270.1|	-	0.018	15.1	0.1	0.14	12.3	0.0	2.0	2	0	0	2	2	2	0	Selenium	binding	protein
GATase	PF00117.23	gi|429216280|ref|YP_007174270.1|	-	0.13	11.7	0.0	0.13	11.7	0.0	1.1	1	0	0	1	1	1	0	Glutamine	amidotransferase	class-I
SLS	PF14611.1	gi|429216281|ref|YP_007174271.1|	-	0.025	13.9	0.1	0.025	13.9	0.1	1.0	1	0	0	1	1	1	0	Mitochondrial	inner-membrane-bound	regulator
HSDR_N_2	PF13588.1	gi|429216281|ref|YP_007174271.1|	-	0.042	13.6	1.1	0.046	13.5	0.8	1.0	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
Fib_alpha	PF08702.5	gi|429216281|ref|YP_007174271.1|	-	0.1	12.6	0.6	0.12	12.5	0.4	1.0	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF3841	PF12952.2	gi|429216281|ref|YP_007174271.1|	-	0.14	11.6	0.9	0.16	11.4	0.6	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3841)
TcdA_TcdB	PF12919.2	gi|429216281|ref|YP_007174271.1|	-	0.6	8.5	4.0	0.58	8.5	2.8	1.0	1	0	0	1	1	1	0	TcdA/TcdB	catalytic	glycosyltransferase	domain
DUF131	PF01998.12	gi|429216282|ref|YP_007174272.1|	-	6.1e-18	63.9	9.9	6.1e-18	63.9	6.8	2.2	1	1	2	3	3	3	1	Protein	of	unknown	function	DUF131
DUF202	PF02656.10	gi|429216282|ref|YP_007174272.1|	-	0.0001	22.4	4.0	0.00024	21.2	2.7	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF202)
Claudin_2	PF13903.1	gi|429216282|ref|YP_007174272.1|	-	0.029	14.0	7.0	0.19	11.4	4.9	1.9	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
UbiA	PF01040.13	gi|429216282|ref|YP_007174272.1|	-	0.052	12.7	5.7	0.061	12.5	4.0	1.1	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
IncA	PF04156.9	gi|429216282|ref|YP_007174272.1|	-	0.081	12.5	11.1	0.61	9.6	0.2	2.1	2	0	0	2	2	2	0	IncA	protein
Lig_chan	PF00060.21	gi|429216282|ref|YP_007174272.1|	-	0.15	11.7	0.1	0.15	11.7	0.1	1.9	1	1	0	2	2	2	0	Ligand-gated	ion	channel
SUR7	PF06687.7	gi|429216282|ref|YP_007174272.1|	-	0.16	11.4	1.3	0.26	10.8	0.9	1.3	1	1	0	1	1	1	0	SUR7/PalI	family
SHR3_chaperone	PF08229.6	gi|429216282|ref|YP_007174272.1|	-	0.18	10.7	1.5	0.18	10.7	0.0	1.6	2	0	0	2	2	2	0	ER	membrane	protein	SH3
DUF4131	PF13567.1	gi|429216282|ref|YP_007174272.1|	-	0.28	10.5	1.6	0.51	9.7	1.1	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF3290	PF11694.3	gi|429216282|ref|YP_007174272.1|	-	0.47	10.1	4.4	1.1	8.9	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3290)
PhaG_MnhG_YufB	PF03334.9	gi|429216282|ref|YP_007174272.1|	-	0.66	10.0	10.3	4.5	7.3	7.2	2.0	1	1	0	1	1	1	0	Na+/H+	antiporter	subunit
DUF3522	PF12036.3	gi|429216282|ref|YP_007174272.1|	-	1.2	8.9	5.8	5.8	6.6	3.3	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3522)
DUF1056	PF06341.6	gi|429216282|ref|YP_007174272.1|	-	1.5	8.9	13.1	0.79	9.8	0.8	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1056)
TMEM238	PF15125.1	gi|429216282|ref|YP_007174272.1|	-	1.7	8.5	5.7	15	5.6	0.1	2.2	2	0	0	2	2	2	0	TMEM238	protein	family
DUF3671	PF12420.3	gi|429216282|ref|YP_007174272.1|	-	1.9	8.5	6.4	2.9	7.9	4.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF4282	PF14110.1	gi|429216282|ref|YP_007174272.1|	-	2	8.6	12.9	0.52	10.5	0.7	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4282)
DUF4418	PF14387.1	gi|429216282|ref|YP_007174272.1|	-	3.6	7.3	8.9	4.5	7.0	0.4	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4418)
Baculo_11_kDa	PF06143.6	gi|429216282|ref|YP_007174272.1|	-	4.6	6.6	7.6	0.63	9.4	0.1	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
Sigma_reg_N	PF13800.1	gi|429216282|ref|YP_007174272.1|	-	8.6	6.4	10.6	4.6	7.3	0.6	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
NfeD	PF01957.13	gi|429216282|ref|YP_007174272.1|	-	8.8	6.4	9.4	1	9.5	0.2	2.1	1	1	1	2	2	2	0	NfeD-like	C-terminal,	partner-binding
Trm112p	PF03966.11	gi|429216283|ref|YP_007174273.1|	-	2.8e-12	46.7	1.2	4.4e-12	46.1	0.9	1.3	1	0	0	1	1	1	1	Trm112p-like	protein
zf-TFIIB	PF13453.1	gi|429216283|ref|YP_007174273.1|	-	0.013	14.6	1.2	0.013	14.6	0.8	2.6	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
DUF35_N	PF12172.3	gi|429216283|ref|YP_007174273.1|	-	0.028	14.3	0.3	11	6.0	0.0	2.5	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-UDP	PF14569.1	gi|429216283|ref|YP_007174273.1|	-	0.038	13.7	1.1	0.15	11.8	0.0	2.1	1	1	1	2	2	2	0	Zinc-binding	RING-finger
A2L_zn_ribbon	PF08792.5	gi|429216283|ref|YP_007174273.1|	-	0.1	12.0	3.6	0.4	10.2	0.7	2.5	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|429216283|ref|YP_007174273.1|	-	0.2	12.0	4.1	2.8	8.3	2.8	2.1	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.2	gi|429216283|ref|YP_007174273.1|	-	0.46	10.3	3.2	2.4	8.0	0.1	2.8	3	0	0	3	3	3	0	Transposase	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|429216283|ref|YP_007174273.1|	-	0.59	10.4	0.1	0.59	10.4	0.0	2.5	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
DZR	PF12773.2	gi|429216283|ref|YP_007174273.1|	-	1.5	8.6	7.7	9.4	6.1	5.4	2.0	1	1	0	1	1	1	0	Double	zinc	ribbon
RRN7	PF11781.3	gi|429216283|ref|YP_007174273.1|	-	1.7	8.2	4.8	12	5.4	0.1	3.3	2	1	1	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
TFIIS_C	PF01096.13	gi|429216283|ref|YP_007174273.1|	-	2.5	7.7	0.0	2.5	7.7	0.0	3.3	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
zf-HYPF	PF07503.7	gi|429216283|ref|YP_007174273.1|	-	4.3	6.8	6.9	15	5.1	0.2	2.9	3	0	0	3	3	3	0	HypF	finger
TF_Zn_Ribbon	PF08271.7	gi|429216283|ref|YP_007174273.1|	-	6.3	6.2	12.6	0.81	9.0	0.2	3.1	2	2	2	4	4	4	0	TFIIB	zinc-binding
PGM_PMM_I	PF02878.11	gi|429216284|ref|YP_007174274.1|	-	3e-44	149.8	0.0	6.3e-44	148.8	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|429216284|ref|YP_007174274.1|	-	4.2e-25	88.0	0.1	8.8e-25	87.0	0.1	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|429216284|ref|YP_007174274.1|	-	1e-15	57.7	0.0	1.8e-15	56.9	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|429216284|ref|YP_007174274.1|	-	9.7e-10	38.3	0.0	2.7e-09	36.8	0.0	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
EMG1	PF03587.9	gi|429216285|ref|YP_007174275.1|	-	2.9e-39	134.4	0.4	3.4e-39	134.2	0.3	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Cylicin_N	PF15241.1	gi|429216285|ref|YP_007174275.1|	-	0.02	14.7	0.0	0.039	13.8	0.0	1.4	1	0	0	1	1	1	0	Cylicin	N-terminus
Lactamase_B_2	PF12706.2	gi|429216286|ref|YP_007174276.1|	-	3e-06	26.9	0.0	4.6e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|429216286|ref|YP_007174276.1|	-	0.49	10.0	6.1	0.93	9.0	4.2	1.4	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily
tRNA_m1G_MT	PF01746.16	gi|429216287|ref|YP_007174277.1|	-	2.9e-27	95.4	0.0	4e-27	94.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
RNA_Me_trans	PF04252.8	gi|429216287|ref|YP_007174277.1|	-	2.4e-06	27.0	0.0	6.3e-06	25.7	0.0	1.7	1	0	0	1	1	1	1	Predicted	SAM-dependent	RNA	methyltransferase
RNase_HII	PF01351.13	gi|429216288|ref|YP_007174278.1|	-	2.1e-38	131.9	0.0	2.5e-38	131.7	0.0	1.1	1	0	0	1	1	1	1	Ribonuclease	HII
DUF59	PF01883.14	gi|429216289|ref|YP_007174279.1|	-	6.5e-14	51.6	0.1	1.1e-13	51.0	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
DUF384	PF04064.8	gi|429216289|ref|YP_007174279.1|	-	0.14	11.7	0.0	0.28	10.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF384)
MoCF_biosynth	PF00994.19	gi|429216290|ref|YP_007174280.1|	-	1.5e-36	124.9	0.0	2.2e-36	124.4	0.0	1.2	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Caudo_TAP	PF02413.12	gi|429216290|ref|YP_007174280.1|	-	0.091	12.9	0.0	0.7	10.0	0.0	2.1	2	0	0	2	2	2	0	Caudovirales	tail	fibre	assembly	protein
DUF4350	PF14258.1	gi|429216290|ref|YP_007174280.1|	-	0.14	12.4	0.0	0.25	11.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4350)
MFS_1	PF07690.11	gi|429216291|ref|YP_007174281.1|	-	3.5e-45	154.2	57.3	3.5e-45	154.2	39.7	3.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216291|ref|YP_007174281.1|	-	1.8e-08	33.4	11.9	1.8e-08	33.4	8.3	3.7	1	1	2	4	4	4	3	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|429216291|ref|YP_007174281.1|	-	3.8e-05	22.0	20.6	0.00011	20.4	0.9	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
ARL6IP6	PF15062.1	gi|429216291|ref|YP_007174281.1|	-	0.11	12.3	0.8	6.9	6.6	0.0	3.1	3	0	0	3	3	3	0	Haemopoietic	lineage	transmembrane	helix
MFS_2	PF13347.1	gi|429216291|ref|YP_007174281.1|	-	0.26	9.6	44.7	0.06	11.7	3.1	3.5	1	1	1	2	2	2	0	MFS/sugar	transport	protein
ABC_tran	PF00005.22	gi|429216292|ref|YP_007174282.1|	-	1.8e-22	80.1	0.1	5.2e-22	78.6	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|429216292|ref|YP_007174282.1|	-	2.1e-13	50.8	0.0	3e-06	27.4	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|429216292|ref|YP_007174282.1|	-	9.6e-06	24.9	0.1	0.00022	20.5	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|429216292|ref|YP_007174282.1|	-	2.4e-05	24.7	0.4	4.7e-05	23.8	0.3	1.5	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|429216292|ref|YP_007174282.1|	-	3.5e-05	23.0	0.1	6.2e-05	22.2	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|429216292|ref|YP_007174282.1|	-	9.2e-05	21.6	0.0	0.0006	18.9	0.1	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|429216292|ref|YP_007174282.1|	-	0.00059	19.9	0.0	0.0013	18.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|429216292|ref|YP_007174282.1|	-	0.0018	16.8	0.0	0.0026	16.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|429216292|ref|YP_007174282.1|	-	0.0032	17.1	0.1	0.0065	16.1	0.1	1.5	1	1	0	1	1	1	1	NACHT	domain
AAA_10	PF12846.2	gi|429216292|ref|YP_007174282.1|	-	0.0032	16.9	0.1	0.013	14.9	0.0	2.0	1	1	2	3	3	3	1	AAA-like	domain
AAA_17	PF13207.1	gi|429216292|ref|YP_007174282.1|	-	0.005	17.6	0.1	0.032	15.0	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|429216292|ref|YP_007174282.1|	-	0.006	16.0	0.1	0.011	15.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|429216292|ref|YP_007174282.1|	-	0.017	15.2	0.3	0.15	12.3	0.2	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|429216292|ref|YP_007174282.1|	-	0.019	14.9	0.0	0.024	14.6	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_30	PF13604.1	gi|429216292|ref|YP_007174282.1|	-	0.035	13.6	0.0	0.075	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|429216292|ref|YP_007174282.1|	-	0.039	13.7	0.0	0.083	12.6	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
AAA_18	PF13238.1	gi|429216292|ref|YP_007174282.1|	-	0.067	13.5	0.0	0.13	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|429216292|ref|YP_007174282.1|	-	0.081	12.6	0.0	0.62	9.7	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
UPF0079	PF02367.12	gi|429216292|ref|YP_007174282.1|	-	0.083	12.5	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SRP54	PF00448.17	gi|429216292|ref|YP_007174282.1|	-	0.083	12.3	0.1	0.18	11.1	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
T2SE	PF00437.15	gi|429216292|ref|YP_007174282.1|	-	0.097	11.5	0.1	2.7	6.7	0.0	2.1	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
GTP_EFTU	PF00009.22	gi|429216292|ref|YP_007174282.1|	-	0.1	12.0	0.0	0.32	10.3	0.0	1.8	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
RNA_helicase	PF00910.17	gi|429216292|ref|YP_007174282.1|	-	0.1	12.7	0.0	0.23	11.6	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_28	PF13521.1	gi|429216292|ref|YP_007174282.1|	-	0.11	12.4	0.0	0.25	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|429216292|ref|YP_007174282.1|	-	0.11	12.2	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
SbcCD_C	PF13558.1	gi|429216292|ref|YP_007174282.1|	-	0.12	12.2	0.0	0.68	9.8	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
ABC2_membrane	PF01061.19	gi|429216293|ref|YP_007174283.1|	-	1.9e-07	30.4	21.7	1.9e-07	30.4	15.0	1.5	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|429216293|ref|YP_007174283.1|	-	0.00015	20.8	36.4	0.00015	20.8	25.2	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
GATase_6	PF13522.1	gi|429216294|ref|YP_007174284.1|	-	5.8e-07	29.5	0.0	8.7e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|429216294|ref|YP_007174284.1|	-	9.1e-05	21.2	0.0	0.00015	20.5	0.0	1.4	1	1	1	2	2	2	1	Glutamine	amidotransferases	class-II
DUF2527	PF10736.4	gi|429216294|ref|YP_007174284.1|	-	0.032	13.8	0.0	0.085	12.4	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2627)
MFS_1	PF07690.11	gi|429216295|ref|YP_007174285.1|	-	7.3e-24	84.1	43.4	7.3e-24	84.1	30.1	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|429216295|ref|YP_007174285.1|	-	0.0068	14.5	8.4	0.0094	14.1	5.8	1.1	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Oxidored_q1_N	PF00662.15	gi|429216295|ref|YP_007174285.1|	-	4.2	6.9	14.1	0.41	10.2	1.4	3.0	2	0	0	2	2	2	0	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Inositol_P	PF00459.20	gi|429216296|ref|YP_007174286.1|	-	1.4e-21	76.9	0.0	1.7e-21	76.7	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|429216296|ref|YP_007174286.1|	-	0.025	13.4	0.1	0.049	12.4	0.0	1.5	2	0	0	2	2	2	0	Fructose-1-6-bisphosphatase
eRF1_1	PF03463.10	gi|429216297|ref|YP_007174287.1|	-	3.1e-22	78.5	0.8	6.3e-22	77.5	0.6	1.5	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|429216297|ref|YP_007174287.1|	-	1.5e-16	60.6	1.1	4.9e-16	58.9	0.4	2.1	2	0	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|429216297|ref|YP_007174287.1|	-	3.3e-15	56.6	1.1	4.8e-15	56.0	0.1	1.8	2	0	0	2	2	2	1	eRF1	domain	2
ATP-synt_D	PF01813.12	gi|429216298|ref|YP_007174288.1|	-	1.5e-42	145.4	0.5	1.7e-42	145.2	0.3	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
Ead_Ea22	PF13935.1	gi|429216298|ref|YP_007174288.1|	-	0.071	13.4	0.5	0.13	12.6	0.3	1.4	1	0	0	1	1	1	0	Ead/Ea22-like	protein
Virul_fac_BrkB	PF03631.10	gi|429216299|ref|YP_007174289.1|	-	0.0095	15.3	4.3	0.011	15.1	3.0	1.1	1	0	0	1	1	1	1	Virulence	factor	BrkB
PepSY_TM_2	PF13703.1	gi|429216299|ref|YP_007174289.1|	-	1.8	8.7	7.3	4.3	7.5	5.0	1.8	1	1	0	1	1	1	0	PepSY-associated	TM	helix
MARVEL	PF01284.18	gi|429216299|ref|YP_007174289.1|	-	7.9	6.2	9.3	30	4.4	6.4	1.8	1	1	0	1	1	1	0	Membrane-associating	domain
DEAD	PF00270.24	gi|429216300|ref|YP_007174290.1|	-	3.4e-17	62.4	0.0	1.4e-15	57.2	0.0	2.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|429216300|ref|YP_007174290.1|	-	4.1e-15	55.4	0.0	4.7e-12	45.5	0.0	3.3	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
TFIIB	PF00382.14	gi|429216301|ref|YP_007174291.1|	-	1.9e-14	53.1	0.1	2.8e-12	46.2	0.1	2.3	2	0	0	2	2	2	1	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|429216301|ref|YP_007174291.1|	-	5.6e-11	41.5	0.4	5.6e-11	41.5	0.3	1.9	2	0	0	2	2	2	1	TFIIB	zinc-binding
HTH_24	PF13412.1	gi|429216301|ref|YP_007174291.1|	-	0.00031	20.0	0.1	0.0024	17.2	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_37	PF13744.1	gi|429216301|ref|YP_007174291.1|	-	0.00039	20.1	0.3	0.073	12.8	0.0	3.1	3	0	0	3	3	3	1	Helix-turn-helix	domain
A2L_zn_ribbon	PF08792.5	gi|429216301|ref|YP_007174291.1|	-	0.0013	18.0	1.3	0.0022	17.4	0.9	1.3	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
RRN7	PF11781.3	gi|429216301|ref|YP_007174291.1|	-	0.0022	17.4	0.1	0.0033	16.8	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Sigma70_r4	PF04545.11	gi|429216301|ref|YP_007174291.1|	-	0.005	16.1	0.0	0.013	14.7	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
Sigma70_r4_2	PF08281.7	gi|429216301|ref|YP_007174291.1|	-	0.011	15.1	0.3	0.042	13.3	0.0	2.0	2	0	0	2	2	2	0	Sigma-70,	region	4
Put_DNA-bind_N	PF06971.8	gi|429216301|ref|YP_007174291.1|	-	0.077	12.7	0.9	0.75	9.5	0.1	2.7	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
HTH_3	PF01381.17	gi|429216301|ref|YP_007174291.1|	-	0.094	12.5	0.1	0.72	9.7	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix
Mu-like_Com	PF10122.4	gi|429216301|ref|YP_007174291.1|	-	0.11	11.5	0.1	0.24	10.4	0.1	1.5	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
HTH_26	PF13443.1	gi|429216301|ref|YP_007174291.1|	-	0.12	12.6	0.2	0.54	10.5	0.0	2.2	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
Rrf2	PF02082.15	gi|429216301|ref|YP_007174291.1|	-	0.12	12.5	1.4	0.32	11.1	0.0	2.4	3	0	0	3	3	2	0	Transcriptional	regulator
zf-ribbon_3	PF13248.1	gi|429216301|ref|YP_007174291.1|	-	0.17	11.1	2.1	0.39	9.9	1.5	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
Gar1	PF04410.9	gi|429216302|ref|YP_007174292.1|	-	4e-09	36.1	0.9	5.1e-09	35.7	0.6	1.0	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
DUF3400	PF11880.3	gi|429216303|ref|YP_007174293.1|	-	0.0036	16.4	0.1	0.0096	15.1	0.0	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3400)
MarR	PF01047.17	gi|429216304|ref|YP_007174294.1|	-	2.1e-05	24.1	0.2	3.4e-05	23.4	0.1	1.4	1	0	0	1	1	1	1	MarR	family
B-block_TFIIIC	PF04182.7	gi|429216304|ref|YP_007174294.1|	-	4.1e-05	23.3	0.0	6.1e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
RNA_pol_Rpc34	PF05158.7	gi|429216304|ref|YP_007174294.1|	-	0.00017	20.8	0.5	0.023	13.8	0.0	2.0	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
MarR_2	PF12802.2	gi|429216304|ref|YP_007174294.1|	-	0.0075	15.9	0.1	0.012	15.3	0.1	1.2	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|429216304|ref|YP_007174294.1|	-	0.13	12.5	0.1	0.23	11.8	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
SRP19	PF01922.12	gi|429216305|ref|YP_007174295.1|	-	1.1e-24	86.8	1.2	1.3e-24	86.6	0.8	1.1	1	0	0	1	1	1	1	SRP19	protein
Radical_SAM	PF04055.16	gi|429216306|ref|YP_007174296.1|	-	3.5e-17	63.0	0.0	8.7e-17	61.7	0.0	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.1	gi|429216306|ref|YP_007174296.1|	-	5.2e-07	29.8	0.5	6.1e-06	26.4	0.0	2.5	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.1	gi|429216306|ref|YP_007174296.1|	-	3.3e-06	27.2	0.0	7.4e-06	26.1	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|429216306|ref|YP_007174296.1|	-	5.4e-06	26.4	0.0	3.4e-05	23.8	0.0	2.2	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
HTH_AsnC-type	PF13404.1	gi|429216307|ref|YP_007174297.1|	-	2.7e-06	26.8	0.0	4.9e-06	25.9	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|429216307|ref|YP_007174297.1|	-	6.2e-06	25.4	1.7	6.2e-06	25.4	1.2	2.3	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.12	gi|429216307|ref|YP_007174297.1|	-	0.047	13.2	2.8	1.2	8.6	0.1	3.2	3	0	0	3	3	3	0	TFIIE	alpha	subunit
HTH_20	PF12840.2	gi|429216307|ref|YP_007174297.1|	-	0.063	13.0	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
RPA_C	PF08784.6	gi|429216307|ref|YP_007174297.1|	-	0.071	13.5	0.0	9.3	6.7	0.0	2.5	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Radical_SAM	PF04055.16	gi|429216308|ref|YP_007174298.1|	-	4.5e-22	78.9	0.1	1.2e-21	77.5	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|429216308|ref|YP_007174298.1|	-	4.9e-10	39.6	0.1	1.3e-09	38.2	0.1	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|429216308|ref|YP_007174298.1|	-	6.3e-10	39.1	0.0	3.3e-09	36.7	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|429216308|ref|YP_007174298.1|	-	2.9e-09	37.1	0.3	7.7e-09	35.7	0.2	1.7	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
COG2	PF06148.6	gi|429216308|ref|YP_007174298.1|	-	0.14	12.0	0.1	0.4	10.5	0.0	1.7	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
NAD_binding_7	PF13241.1	gi|429216309|ref|YP_007174299.1|	-	2.5e-24	85.5	0.6	6.8e-24	84.1	0.0	1.8	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|429216309|ref|YP_007174299.1|	-	0.00026	20.9	0.2	0.00047	20.1	0.1	1.4	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|429216309|ref|YP_007174299.1|	-	0.0034	16.9	0.4	0.091	12.3	0.0	2.4	2	1	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Shikimate_DH	PF01488.15	gi|429216309|ref|YP_007174299.1|	-	0.0081	16.2	0.7	0.019	15.0	0.1	1.9	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
Cas_DxTHG	PF09455.5	gi|429216309|ref|YP_007174299.1|	-	0.0088	15.2	12.5	0.012	14.7	8.6	1.2	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
F420_oxidored	PF03807.12	gi|429216309|ref|YP_007174299.1|	-	0.013	15.8	0.3	0.039	14.3	0.1	1.8	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|429216309|ref|YP_007174299.1|	-	0.016	15.0	4.1	0.023	14.5	0.1	2.5	1	1	0	2	2	2	0	ThiF	family
Spermine_synth	PF01564.12	gi|429216309|ref|YP_007174299.1|	-	0.017	14.0	0.1	0.031	13.2	0.1	1.5	1	0	0	1	1	1	0	Spermine/spermidine	synthase
NAD_binding_10	PF13460.1	gi|429216309|ref|YP_007174299.1|	-	0.038	14.0	0.0	0.042	13.8	0.0	1.3	1	1	0	1	1	1	0	NADH(P)-binding
NAD_Gly3P_dh_N	PF01210.18	gi|429216309|ref|YP_007174299.1|	-	0.038	13.7	0.3	0.098	12.3	0.2	2.0	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|429216309|ref|YP_007174299.1|	-	0.11	12.1	0.3	0.31	10.6	0.0	2.0	2	1	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UPF0223	PF05256.7	gi|429216309|ref|YP_007174299.1|	-	0.12	12.4	7.8	0.36	10.9	0.8	2.4	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0223)
UDPG_MGDP_dh_C	PF03720.10	gi|429216309|ref|YP_007174299.1|	-	0.19	11.9	1.4	0.55	10.4	0.0	2.2	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
Pyr_redox	PF00070.22	gi|429216309|ref|YP_007174299.1|	-	0.19	12.1	6.9	0.31	11.4	1.9	2.8	2	2	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
AMP-binding	PF00501.23	gi|429216310|ref|YP_007174300.1|	-	7.5e-82	274.9	0.0	9.6e-82	274.5	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216310|ref|YP_007174300.1|	-	6.5e-23	81.4	0.3	1.3e-22	80.5	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
HIT	PF01230.18	gi|429216311|ref|YP_007174301.1|	-	2e-10	41.0	0.0	3e-10	40.4	0.0	1.3	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|429216311|ref|YP_007174301.1|	-	1.4e-06	28.5	0.1	2.2e-06	27.8	0.0	1.5	1	1	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CoA_trans	PF01144.18	gi|429216312|ref|YP_007174302.1|	-	1.2e-13	50.7	0.0	1.7e-13	50.2	0.0	1.2	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.18	gi|429216313|ref|YP_007174303.1|	-	4.8e-22	78.2	0.1	6.1e-22	77.8	0.1	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
AcetylCoA_hydro	PF02550.10	gi|429216313|ref|YP_007174303.1|	-	0.014	15.1	0.1	0.15	11.8	0.0	2.3	2	0	0	2	2	2	0	Acetyl-CoA	hydrolase/transferase	N-terminal	domain
LYTB	PF02401.13	gi|429216313|ref|YP_007174303.1|	-	0.019	13.9	0.0	0.065	12.1	0.0	1.7	2	0	0	2	2	2	0	LytB	protein
ECH	PF00378.15	gi|429216314|ref|YP_007174304.1|	-	7.3e-41	139.8	0.0	8.9e-41	139.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
DUF4064	PF13273.1	gi|429216315|ref|YP_007174305.1|	-	0.0008	19.4	15.1	0.0008	19.4	10.5	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4064)
TMEMspv1-c74-12	PF11044.3	gi|429216315|ref|YP_007174305.1|	-	0.33	10.5	0.2	0.33	10.5	0.2	2.5	2	1	0	2	2	2	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
DSX_dimer	PF08828.5	gi|429216315|ref|YP_007174305.1|	-	3.9	7.0	4.7	0.64	9.6	0.4	1.8	2	0	0	2	2	2	0	Doublesex	dimerisation	domain
Pox_P21	PF05313.7	gi|429216315|ref|YP_007174305.1|	-	9.6	5.4	8.5	16	4.7	5.9	1.3	1	0	0	1	1	1	0	Poxvirus	P21	membrane	protein
Homoserine_dh	PF00742.14	gi|429216316|ref|YP_007174306.1|	-	1.7e-42	145.1	0.2	2.4e-42	144.6	0.1	1.2	1	0	0	1	1	1	1	Homoserine	dehydrogenase
TrkA_N	PF02254.13	gi|429216316|ref|YP_007174306.1|	-	0.0068	16.4	0.2	0.027	14.4	0.0	2.2	2	1	0	2	2	2	1	TrkA-N	domain
CLU_N	PF15044.1	gi|429216316|ref|YP_007174306.1|	-	0.019	15.1	0.0	0.063	13.4	0.0	1.9	1	0	0	1	1	1	0	Mitochondrial	function,	CLU-N-term
F420_oxidored	PF03807.12	gi|429216316|ref|YP_007174306.1|	-	0.029	14.7	0.1	0.12	12.7	0.0	2.2	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|429216316|ref|YP_007174306.1|	-	0.04	14.4	0.0	0.092	13.2	0.0	1.6	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_3	PF03447.11	gi|429216316|ref|YP_007174306.1|	-	0.1	12.9	0.0	1.1	9.6	0.0	2.3	1	1	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
OMPdecase	PF00215.19	gi|429216317|ref|YP_007174307.1|	-	1.9e-27	96.1	1.7	2.5e-27	95.7	1.2	1.0	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Ribul_P_3_epim	PF00834.14	gi|429216317|ref|YP_007174307.1|	-	0.00043	19.4	1.0	0.00094	18.3	0.7	1.8	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
NanE	PF04131.9	gi|429216317|ref|YP_007174307.1|	-	0.00068	18.6	0.7	0.077	11.9	0.1	2.5	2	1	0	2	2	2	2	Putative	N-acetylmannosamine-6-phosphate	epimerase
Aldolase	PF01081.14	gi|429216317|ref|YP_007174307.1|	-	0.0013	17.9	0.7	0.0053	15.9	0.3	2.0	2	1	0	2	2	2	1	KDPG	and	KHG	aldolase
QRPTase_C	PF01729.14	gi|429216317|ref|YP_007174307.1|	-	0.0043	16.5	0.7	0.026	14.0	0.5	2.1	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TIM-br_sig_trns	PF09370.5	gi|429216317|ref|YP_007174307.1|	-	0.0053	15.8	0.1	0.012	14.6	0.0	1.6	1	0	0	1	1	1	1	TIM-barrel	signal	transduction	protein
PcrB	PF01884.12	gi|429216317|ref|YP_007174307.1|	-	0.0062	15.8	2.9	0.011	15.0	0.5	2.2	2	0	0	2	2	2	1	PcrB	family
Thiolase_C	PF02803.13	gi|429216317|ref|YP_007174307.1|	-	0.052	12.9	1.3	0.095	12.1	0.2	2.1	2	0	0	2	2	2	0	Thiolase,	C-terminal	domain
Smac_DIABLO	PF09057.5	gi|429216317|ref|YP_007174307.1|	-	0.076	12.1	0.0	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Second	Mitochondria-derived	Activator	of	Caspases
IMPDH	PF00478.20	gi|429216317|ref|YP_007174307.1|	-	0.09	11.6	2.1	0.12	11.2	1.5	1.4	1	1	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
Pro-kuma_activ	PF09286.6	gi|429216318|ref|YP_007174308.1|	-	7e-17	61.8	0.0	2.3e-16	60.1	0.0	1.9	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|429216318|ref|YP_007174308.1|	-	4.5e-08	32.5	2.4	1.2e-07	31.1	1.7	1.7	1	0	0	1	1	1	1	Subtilase	family
FlgD_ig	PF13860.1	gi|429216318|ref|YP_007174308.1|	-	0.011	15.4	0.0	3.4	7.4	0.0	3.0	2	0	0	2	2	2	0	FlgD	Ig-like	domain
AIP3	PF03915.8	gi|429216318|ref|YP_007174308.1|	-	1.8	7.3	5.1	2.8	6.7	3.6	1.1	1	0	0	1	1	1	0	Actin	interacting	protein	3
PNGaseA	PF12222.3	gi|429216319|ref|YP_007174309.1|	-	2.5e-109	366.0	12.2	3.7e-109	365.4	8.4	1.3	1	0	0	1	1	1	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
DrsE_2	PF13686.1	gi|429216320|ref|YP_007174310.1|	-	1.1e-10	41.4	1.7	1.5e-09	37.7	1.2	2.0	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DUF4389	PF14333.1	gi|429216320|ref|YP_007174310.1|	-	0.089	12.5	0.0	0.24	11.1	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4389)
Thermopsin	PF05317.6	gi|429216321|ref|YP_007174311.1|	-	1.6e-25	89.5	30.2	1.6e-25	89.5	20.9	2.1	1	1	1	2	2	2	1	Thermopsin
Amidohydro_5	PF13594.1	gi|429216322|ref|YP_007174312.1|	-	8.2e-13	47.9	0.0	2e-12	46.7	0.0	1.7	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|429216322|ref|YP_007174312.1|	-	3.1e-10	40.2	0.0	2.6e-07	30.6	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|429216322|ref|YP_007174312.1|	-	1.1e-08	35.4	0.0	0.00054	20.0	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|429216322|ref|YP_007174312.1|	-	2.2e-07	30.4	0.0	8.2e-05	21.9	0.0	2.4	2	1	0	2	2	2	2	Amidohydrolase	family
PIN	PF01850.16	gi|429216323|ref|YP_007174313.1|	-	3.9e-19	69.1	0.1	4.4e-19	68.9	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
Antitoxin-MazE	PF04014.13	gi|429216324|ref|YP_007174314.1|	-	1.8e-12	46.7	1.7	2.7e-12	46.1	1.2	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF1905	PF08922.6	gi|429216324|ref|YP_007174314.1|	-	0.021	14.4	0.3	0.041	13.4	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
Arginase	PF00491.16	gi|429216325|ref|YP_007174315.1|	-	1.4e-60	204.9	0.0	1.6e-60	204.7	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
Urocanase	PF01175.13	gi|429216326|ref|YP_007174316.1|	-	2.4e-242	804.8	0.0	2.9e-242	804.5	0.0	1.0	1	0	0	1	1	1	1	Urocanase
DUF2913	PF11140.3	gi|429216326|ref|YP_007174316.1|	-	0.2	10.9	0.0	0.4	9.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2913)
Lyase_aromatic	PF00221.14	gi|429216327|ref|YP_007174317.1|	-	7.3e-103	344.5	0.0	8.9e-103	344.2	0.0	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
DUF226	PF02890.9	gi|429216327|ref|YP_007174317.1|	-	0.02	14.6	0.8	1.8	8.2	0.2	2.5	2	0	0	2	2	2	0	Borrelia	family	of	unknown	function	DUF226
SRP9-21	PF05486.7	gi|429216327|ref|YP_007174317.1|	-	0.037	13.7	0.4	1.2	8.9	0.0	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	9	kDa	protein	(SRP9)
PDT	PF00800.13	gi|429216327|ref|YP_007174317.1|	-	0.08	12.4	0.0	0.17	11.3	0.0	1.5	1	0	0	1	1	1	0	Prephenate	dehydratase
Orn_Arg_deC_N	PF02784.11	gi|429216328|ref|YP_007174318.1|	-	2e-44	151.7	0.0	2.8e-44	151.1	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.17	gi|429216328|ref|YP_007174318.1|	-	1.4e-22	79.5	0.0	2.5e-22	78.7	0.0	1.4	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
AA_permease_2	PF13520.1	gi|429216329|ref|YP_007174319.1|	-	2.3e-44	151.6	60.2	2.3e-44	151.6	41.7	2.0	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|429216329|ref|YP_007174319.1|	-	9.4e-25	86.8	58.1	1.3e-24	86.3	39.7	1.6	1	1	0	1	1	1	1	Amino	acid	permease
DUF488	PF04343.8	gi|429216330|ref|YP_007174320.1|	-	1.9e-31	108.9	1.1	2.1e-31	108.8	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
MS_channel	PF00924.13	gi|429216331|ref|YP_007174321.1|	-	2.3e-17	63.0	8.7	2.3e-17	63.0	6.0	2.2	2	1	0	2	2	2	1	Mechanosensitive	ion	channel
DUF4117	PF13491.1	gi|429216331|ref|YP_007174321.1|	-	1.1	8.7	11.7	0.23	10.8	5.8	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4117)
Gly-zipper_OmpA	PF13436.1	gi|429216331|ref|YP_007174321.1|	-	1.4	8.5	11.3	2.5	7.7	7.8	1.4	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
ABM	PF03992.11	gi|429216332|ref|YP_007174322.1|	-	4.6e-16	58.6	0.0	5.3e-16	58.4	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
SOR	PF07682.6	gi|429216332|ref|YP_007174322.1|	-	0.048	12.2	0.5	0.49	8.9	0.1	2.0	1	1	1	2	2	2	0	Sulphur	oxygenase	reductase
CoA_transf_3	PF02515.12	gi|429216333|ref|YP_007174323.1|	-	1.8e-72	242.6	0.0	2.2e-72	242.2	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
IF2_N	PF04760.10	gi|429216333|ref|YP_007174323.1|	-	0.0014	18.1	0.8	0.1	12.2	0.0	3.2	3	1	0	3	3	3	1	Translation	initiation	factor	IF-2,	N-terminal	region
Amidase	PF01425.16	gi|429216334|ref|YP_007174324.1|	-	1.8e-85	287.4	0.0	2.3e-85	287.1	0.0	1.1	1	0	0	1	1	1	1	Amidase
Ham1p_like	PF01725.11	gi|429216334|ref|YP_007174324.1|	-	0.021	14.1	0.9	0.035	13.4	0.6	1.3	1	0	0	1	1	1	0	Ham1	family
ECH	PF00378.15	gi|429216335|ref|YP_007174325.1|	-	1.2e-38	132.6	0.1	1.4e-38	132.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
CTNNBL	PF08216.6	gi|429216335|ref|YP_007174325.1|	-	0.046	13.3	0.3	0.31	10.6	0.0	2.1	2	0	0	2	2	2	0	Catenin-beta-like,	Arm-motif	containing	nuclear
DUF1515	PF07439.6	gi|429216335|ref|YP_007174325.1|	-	1.8	8.3	5.8	8.7	6.2	0.1	2.9	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1515)
DUF3311	PF11755.3	gi|429216337|ref|YP_007174327.1|	-	8.9e-14	50.7	12.3	1.2e-13	50.3	8.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
DUF4117	PF13491.1	gi|429216337|ref|YP_007174327.1|	-	0.17	11.2	5.3	0.18	11.2	3.7	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4117)
Methyltransf_31	PF13847.1	gi|429216339|ref|YP_007174329.1|	-	1.1e-19	70.4	0.4	1.4e-19	70.2	0.3	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|429216339|ref|YP_007174329.1|	-	2.6e-15	56.6	0.0	3.5e-15	56.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|429216339|ref|YP_007174329.1|	-	5.6e-10	38.7	0.1	6.7e-10	38.4	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_18	PF12847.2	gi|429216339|ref|YP_007174329.1|	-	6.6e-10	39.5	0.0	9.6e-10	39.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|429216339|ref|YP_007174329.1|	-	3.1e-09	36.7	0.6	3.9e-09	36.3	0.4	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_23	PF13489.1	gi|429216339|ref|YP_007174329.1|	-	3.2e-09	36.7	0.0	3.8e-09	36.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|429216339|ref|YP_007174329.1|	-	7e-08	31.8	0.0	8.8e-08	31.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_12	PF08242.7	gi|429216339|ref|YP_007174329.1|	-	8.2e-08	32.6	0.0	1.2e-07	32.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|429216339|ref|YP_007174329.1|	-	2.6e-07	30.3	0.3	7.1e-07	28.9	0.1	1.7	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.8	gi|429216339|ref|YP_007174329.1|	-	4.8e-07	29.2	0.4	6.4e-07	28.7	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.1	gi|429216339|ref|YP_007174329.1|	-	1.4e-06	28.5	0.0	1.9e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|429216339|ref|YP_007174329.1|	-	3.4e-06	26.5	0.1	4.4e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
GidB	PF02527.10	gi|429216339|ref|YP_007174329.1|	-	1e-05	24.7	0.2	1.3e-05	24.4	0.2	1.1	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_26	PF13659.1	gi|429216339|ref|YP_007174329.1|	-	1.2e-05	25.2	0.0	1.8e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Nol1_Nop2_Fmu	PF01189.12	gi|429216339|ref|YP_007174329.1|	-	4.9e-05	22.8	0.0	7.2e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
FtsJ	PF01728.14	gi|429216339|ref|YP_007174329.1|	-	0.00023	21.2	0.0	0.00027	20.9	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
N6_N4_Mtase	PF01555.13	gi|429216339|ref|YP_007174329.1|	-	0.0011	18.5	0.0	0.82	9.1	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_4	PF02390.12	gi|429216339|ref|YP_007174329.1|	-	0.0017	17.4	0.0	0.0027	16.7	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Fibrillarin	PF01269.12	gi|429216339|ref|YP_007174329.1|	-	0.0027	16.6	0.2	0.0041	16.0	0.1	1.3	1	1	0	1	1	1	1	Fibrillarin
Methyltransf_5	PF01795.14	gi|429216339|ref|YP_007174329.1|	-	0.0036	16.6	0.0	0.0046	16.2	0.0	1.1	1	0	0	1	1	1	1	MraW	methylase	family
NNMT_PNMT_TEMT	PF01234.12	gi|429216339|ref|YP_007174329.1|	-	0.0045	15.9	0.0	0.0069	15.3	0.0	1.3	1	0	0	1	1	1	1	NNMT/PNMT/TEMT	family
TusA	PF01206.12	gi|429216339|ref|YP_007174329.1|	-	0.0066	16.0	0.0	0.038	13.5	0.0	2.2	2	0	0	2	2	2	1	Sulfurtransferase	TusA
DREV	PF05219.7	gi|429216339|ref|YP_007174329.1|	-	0.011	14.6	0.0	0.039	12.8	0.0	1.7	1	1	1	2	2	2	0	DREV	methyltransferase
Methyltransf_8	PF05148.10	gi|429216339|ref|YP_007174329.1|	-	0.031	13.9	0.7	0.45	10.1	0.5	2.0	1	1	0	1	1	1	0	Hypothetical	methyltransferase
Methyltransf_3	PF01596.12	gi|429216339|ref|YP_007174329.1|	-	0.051	12.6	0.1	0.077	12.0	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
Cons_hypoth95	PF03602.10	gi|429216339|ref|YP_007174329.1|	-	0.082	12.3	0.0	0.11	11.8	0.0	1.4	1	1	0	1	1	1	0	Conserved	hypothetical	protein	95
Pox_polyA_pol_C	PF12629.2	gi|429216339|ref|YP_007174329.1|	-	0.096	12.3	1.0	0.14	11.8	0.7	1.4	1	1	0	1	1	1	0	Poxvirus	poly(A)	polymerase	C-terminal	domain
DUF938	PF06080.7	gi|429216339|ref|YP_007174329.1|	-	0.097	12.2	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
UPF0020	PF01170.13	gi|429216339|ref|YP_007174329.1|	-	0.1	12.1	0.0	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Ta0938	PF11494.3	gi|429216340|ref|YP_007174330.1|	-	2.4e-46	156.1	5.6	2.6e-46	156.0	3.9	1.0	1	0	0	1	1	1	1	Ta0938
YHS	PF04945.8	gi|429216340|ref|YP_007174330.1|	-	0.073	12.9	0.8	0.13	12.0	0.6	1.4	1	0	0	1	1	1	0	YHS	domain
zf-H2C2_2	PF13465.1	gi|429216340|ref|YP_007174330.1|	-	0.083	13.2	0.6	0.083	13.2	0.4	1.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF1735	PF08522.5	gi|429216340|ref|YP_007174330.1|	-	0.085	13.2	0.1	0.11	12.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1735)
ATPase-cat_bd	PF12156.3	gi|429216340|ref|YP_007174330.1|	-	0.23	12.0	2.1	0.35	11.4	1.4	1.5	1	1	0	1	1	1	0	Putative	metal-binding	domain	of	cation	transport	ATPase
zf-BED	PF02892.10	gi|429216340|ref|YP_007174330.1|	-	0.75	9.6	3.3	0.43	10.3	0.5	1.8	2	0	0	2	2	2	0	BED	zinc	finger
TENA_THI-4	PF03070.11	gi|429216341|ref|YP_007174331.1|	-	2.8e-29	102.4	3.2	2.8e-29	102.3	0.6	1.8	2	0	0	2	2	2	1	TENA/THI-4/PQQC	family
Haem_oxygenas_2	PF14518.1	gi|429216341|ref|YP_007174331.1|	-	0.0011	19.0	0.0	0.0037	17.3	0.0	1.9	2	0	0	2	2	2	1	Iron-containing	redox	enzyme
DUF3650	PF12368.3	gi|429216341|ref|YP_007174331.1|	-	0.0082	15.6	0.3	0.0082	15.6	0.2	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3650)
DUF3891	PF13030.1	gi|429216341|ref|YP_007174331.1|	-	0.0096	15.4	0.1	0.019	14.4	0.0	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3891)
YccJ	PF13993.1	gi|429216341|ref|YP_007174331.1|	-	0.047	13.7	0.5	0.11	12.5	0.0	1.9	2	0	0	2	2	2	0	YccJ-like	protein
DUF998	PF06197.8	gi|429216342|ref|YP_007174332.1|	-	9.9e-23	80.3	13.2	1.3e-22	80.0	9.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
AhpC-TSA	PF00578.16	gi|429216343|ref|YP_007174333.1|	-	4e-37	126.6	0.1	4.7e-37	126.4	0.0	1.0	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|429216343|ref|YP_007174333.1|	-	4e-22	78.3	0.0	4.7e-22	78.1	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA_2	PF13911.1	gi|429216343|ref|YP_007174333.1|	-	0.00012	22.0	0.1	0.0064	16.4	0.0	2.1	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
AMP-binding	PF00501.23	gi|429216344|ref|YP_007174334.1|	-	3.2e-74	249.7	0.0	4e-74	249.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216344|ref|YP_007174334.1|	-	6e-11	43.1	0.0	1.5e-10	41.8	0.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Acyl-CoA_dh_1	PF00441.19	gi|429216345|ref|YP_007174335.1|	-	3.6e-38	131.0	0.0	5.5e-38	130.4	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|429216345|ref|YP_007174335.1|	-	2e-11	43.2	0.1	3.9e-11	42.2	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|429216345|ref|YP_007174335.1|	-	1.5e-09	38.2	0.0	2.2e-09	37.6	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
IGPS	PF00218.16	gi|429216346|ref|YP_007174336.1|	-	1.2e-63	214.5	0.4	1.5e-63	214.2	0.2	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|429216346|ref|YP_007174336.1|	-	0.00029	20.2	0.0	0.012	14.9	0.0	2.3	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|429216346|ref|YP_007174336.1|	-	0.0075	15.1	0.0	1.9	7.2	0.0	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
QRPTase_C	PF01729.14	gi|429216346|ref|YP_007174336.1|	-	0.043	13.3	0.0	0.34	10.4	0.0	2.0	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
EAL	PF00563.15	gi|429216346|ref|YP_007174336.1|	-	0.045	13.2	1.0	0.3	10.5	0.2	2.1	1	1	0	2	2	2	0	EAL	domain
GATase	PF00117.23	gi|429216347|ref|YP_007174337.1|	-	2.6e-51	173.8	0.1	3.2e-51	173.5	0.1	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|429216347|ref|YP_007174337.1|	-	2.4e-12	46.7	0.0	9.7e-12	44.7	0.0	1.9	2	0	0	2	2	2	1	Peptidase	C26
SNO	PF01174.14	gi|429216347|ref|YP_007174337.1|	-	0.0075	15.9	0.2	0.022	14.3	0.1	1.8	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Chorismate_bind	PF00425.13	gi|429216348|ref|YP_007174338.1|	-	2.8e-86	289.0	0.0	5.1e-86	288.1	0.0	1.4	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|429216348|ref|YP_007174338.1|	-	1.1e-05	25.4	0.0	8.1e-05	22.6	0.0	2.2	2	1	1	3	3	3	1	Anthranilate	synthase	component	I,	N	terminal	region
DUF3502	PF12010.3	gi|429216348|ref|YP_007174338.1|	-	0.0002	21.3	2.3	0.00053	19.9	1.6	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3502)
PRAI	PF00697.17	gi|429216349|ref|YP_007174339.1|	-	2e-21	76.4	0.0	2.4e-21	76.2	0.0	1.0	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
TroA	PF01297.12	gi|429216349|ref|YP_007174339.1|	-	0.059	12.6	0.2	0.45	9.7	0.0	1.9	1	1	1	2	2	2	0	Periplasmic	solute	binding	protein	family
CO_dh	PF02552.11	gi|429216349|ref|YP_007174339.1|	-	0.42	10.1	4.1	0.34	10.4	1.0	2.0	1	1	1	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
Glycos_transf_3	PF00591.16	gi|429216350|ref|YP_007174340.1|	-	2.4e-75	253.1	0.0	3.5e-75	252.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|429216350|ref|YP_007174340.1|	-	1.5e-17	62.8	0.2	2.7e-17	62.1	0.2	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
Trp_syntA	PF00290.15	gi|429216351|ref|YP_007174341.1|	-	6e-35	120.0	0.0	7.3e-35	119.7	0.0	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.12	gi|429216351|ref|YP_007174341.1|	-	0.0032	16.7	0.1	0.0084	15.3	0.0	1.8	2	1	0	2	2	2	1	PcrB	family
His_biosynth	PF00977.16	gi|429216351|ref|YP_007174341.1|	-	0.011	15.0	0.1	0.022	14.0	0.0	1.4	2	0	0	2	2	2	0	Histidine	biosynthesis	protein
Ribul_P_3_epim	PF00834.14	gi|429216351|ref|YP_007174341.1|	-	0.14	11.2	0.1	0.27	10.2	0.1	1.5	1	1	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
PALP	PF00291.20	gi|429216352|ref|YP_007174342.1|	-	8.6e-34	117.1	0.0	1.3e-33	116.5	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Transketolase_N	PF00456.16	gi|429216353|ref|YP_007174343.1|	-	2.1e-32	112.2	0.0	3e-32	111.7	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
XFP_N	PF09364.5	gi|429216353|ref|YP_007174343.1|	-	9.1e-09	34.3	0.0	1.3e-08	33.8	0.0	1.2	1	0	0	1	1	1	1	XFP	N-terminal	domain
E1_dh	PF00676.15	gi|429216353|ref|YP_007174343.1|	-	1.3e-07	30.6	0.0	1.8e-07	30.1	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|429216353|ref|YP_007174343.1|	-	1.3e-06	27.6	0.3	3.8e-06	26.0	0.3	1.7	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|429216353|ref|YP_007174343.1|	-	0.0019	17.8	0.0	0.003	17.1	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Transket_pyr	PF02779.19	gi|429216354|ref|YP_007174344.1|	-	6.1e-36	123.5	0.0	9.3e-36	122.9	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|429216354|ref|YP_007174344.1|	-	3.4e-22	78.6	0.0	8.2e-22	77.4	0.0	1.7	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
DAHP_synth_1	PF00793.15	gi|429216355|ref|YP_007174345.1|	-	5.3e-78	261.4	0.0	6.8e-78	261.0	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|429216355|ref|YP_007174345.1|	-	3e-07	29.8	0.0	9.6e-07	28.1	0.0	1.7	1	1	0	1	1	1	1	NeuB	family
PGM_PMM_II	PF02879.11	gi|429216355|ref|YP_007174345.1|	-	0.041	14.1	0.0	0.12	12.7	0.0	1.7	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
DHQ_synthase	PF01761.15	gi|429216356|ref|YP_007174346.1|	-	4e-90	301.2	0.2	5e-90	300.9	0.1	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH_2	PF13685.1	gi|429216356|ref|YP_007174346.1|	-	6.3e-11	42.0	0.5	1.3e-10	41.0	0.3	1.4	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|429216356|ref|YP_007174346.1|	-	4.3e-06	25.6	0.0	3.4e-05	22.6	0.0	1.9	2	0	0	2	2	2	1	Iron-containing	alcohol	dehydrogenase
Shikimate_dh_N	PF08501.6	gi|429216357|ref|YP_007174347.1|	-	1.6e-23	82.5	0.1	1.6e-22	79.3	0.0	2.3	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|429216357|ref|YP_007174347.1|	-	5.1e-14	52.5	0.6	8.7e-14	51.7	0.4	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
UBN2	PF14223.1	gi|429216357|ref|YP_007174347.1|	-	0.022	14.5	0.2	0.048	13.4	0.1	1.5	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
Chorismate_synt	PF01264.16	gi|429216358|ref|YP_007174348.1|	-	3.3e-126	420.4	0.0	3.8e-126	420.2	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
GHMP_kinases_N	PF00288.21	gi|429216359|ref|YP_007174349.1|	-	1.2e-07	31.7	0.2	2.6e-07	30.6	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|429216359|ref|YP_007174349.1|	-	0.00062	19.9	0.0	0.0011	19.1	0.0	1.6	1	1	0	1	1	1	1	GHMP	kinases	C	terminal
ATLF	PF07737.6	gi|429216359|ref|YP_007174349.1|	-	0.017	14.5	0.6	1.8	7.8	0.1	2.2	2	0	0	2	2	2	0	Anthrax	toxin	lethal	factor,	N-	and	C-terminal	domain
EPSP_synthase	PF00275.15	gi|429216360|ref|YP_007174350.1|	-	9.1e-48	162.6	0.0	1.2e-47	162.3	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DUF4516	PF14990.1	gi|429216360|ref|YP_007174350.1|	-	0.016	14.7	0.1	0.037	13.5	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4516)
DHquinase_I	PF01487.10	gi|429216361|ref|YP_007174351.1|	-	2.7e-09	37.0	0.6	2.7e-08	33.7	0.4	2.1	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
MFS_1	PF07690.11	gi|429216362|ref|YP_007174352.1|	-	3e-32	111.7	40.1	1.4e-20	73.3	9.1	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MotA_ExbB	PF01618.11	gi|429216362|ref|YP_007174352.1|	-	0.37	10.4	6.2	2.8	7.5	0.2	2.6	2	0	0	2	2	2	0	MotA/TolQ/ExbB	proton	channel	family
Phosphodiest	PF01663.17	gi|429216363|ref|YP_007174353.1|	-	6.9e-19	68.3	3.8	3.1e-18	66.2	2.6	2.3	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|429216363|ref|YP_007174353.1|	-	9.6e-06	25.3	0.1	0.0089	15.7	0.2	2.4	2	0	0	2	2	2	2	PglZ	domain
Metalloenzyme	PF01676.13	gi|429216363|ref|YP_007174353.1|	-	0.00058	19.3	0.1	0.001	18.5	0.1	1.3	1	0	0	1	1	1	1	Metalloenzyme	superfamily
TAFH	PF07531.9	gi|429216363|ref|YP_007174353.1|	-	0.056	13.0	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	NHR1	homology	to	TAF
AA_kinase	PF00696.23	gi|429216364|ref|YP_007174354.1|	-	3e-38	131.7	0.0	3.7e-38	131.4	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
Semialdhyde_dhC	PF02774.13	gi|429216365|ref|YP_007174355.1|	-	1.2e-36	126.3	0.0	1.7e-36	125.8	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Semialdhyde_dh	PF01118.19	gi|429216365|ref|YP_007174355.1|	-	2.3e-29	102.1	0.0	4.7e-29	101.1	0.0	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|429216365|ref|YP_007174355.1|	-	0.0024	17.7	0.0	0.0052	16.6	0.0	1.6	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.17	gi|429216365|ref|YP_007174355.1|	-	0.022	15.2	0.0	0.039	14.4	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Gp_dh_C	PF02800.15	gi|429216365|ref|YP_007174355.1|	-	0.032	13.6	0.1	0.27	10.6	0.0	2.2	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DXP_reductoisom	PF02670.11	gi|429216365|ref|YP_007174355.1|	-	0.074	13.5	0.0	0.16	12.5	0.0	1.7	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
Epimerase	PF01370.16	gi|429216365|ref|YP_007174355.1|	-	0.096	12.1	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Exo_endo_phos	PF03372.18	gi|429216366|ref|YP_007174356.1|	-	9.1e-19	68.3	0.0	1.1e-18	68.0	0.0	1.1	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|429216366|ref|YP_007174356.1|	-	1e-13	50.9	0.1	1.3e-13	50.5	0.1	1.2	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
AA_permease	PF00324.16	gi|429216367|ref|YP_007174357.1|	-	7.3e-36	123.5	64.6	3.2e-35	121.3	44.8	1.7	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|429216367|ref|YP_007174357.1|	-	1.1e-32	113.1	67.6	3.1e-32	111.6	46.8	1.6	1	1	0	1	1	1	1	Amino	acid	permease
AtpR	PF12966.2	gi|429216367|ref|YP_007174357.1|	-	0.0034	17.4	0.1	0.0034	17.4	0.1	4.3	5	0	0	5	5	5	1	N-ATPase,	AtpR	subunit
Amidohydro_1	PF01979.15	gi|429216368|ref|YP_007174358.1|	-	4.2e-36	125.2	2.4	5.1e-36	124.9	1.6	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|429216368|ref|YP_007174358.1|	-	3.1e-14	52.5	0.1	3.1e-14	52.5	0.1	3.1	3	0	0	3	3	3	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|429216368|ref|YP_007174358.1|	-	9.5e-11	42.2	0.0	0.00024	21.2	0.0	2.4	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|429216368|ref|YP_007174358.1|	-	5.2e-06	25.9	1.8	0.039	13.1	0.1	3.1	2	1	1	3	3	3	2	Amidohydrolase	family
URO-D	PF01208.12	gi|429216368|ref|YP_007174358.1|	-	0.00038	19.4	0.0	0.00059	18.8	0.0	1.2	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Urease_alpha	PF00449.15	gi|429216368|ref|YP_007174358.1|	-	0.078	13.1	0.1	0.078	13.1	0.1	2.5	2	0	0	2	2	2	0	Urease	alpha-subunit,	N-terminal	domain
DUF4366	PF14283.1	gi|429216369|ref|YP_007174359.1|	-	0.0058	16.0	0.0	0.012	15.0	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4366)
Sporozoite_P67	PF05642.6	gi|429216369|ref|YP_007174359.1|	-	0.13	10.1	14.7	0.18	9.6	10.2	1.1	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
DUF912	PF06024.7	gi|429216369|ref|YP_007174359.1|	-	0.19	11.7	0.1	0.19	11.7	0.1	3.4	2	1	1	3	3	3	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DUF4307	PF14155.1	gi|429216369|ref|YP_007174359.1|	-	0.56	10.0	10.5	0.48	10.2	1.1	3.1	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4307)
TMEM125	PF15109.1	gi|429216369|ref|YP_007174359.1|	-	0.84	9.7	3.9	0.51	10.4	0.9	2.0	1	1	0	2	2	2	0	TMEM125	protein	family
FliD_N	PF02465.13	gi|429216369|ref|YP_007174359.1|	-	3.8	7.9	17.5	6.9	7.1	0.2	2.4	2	0	0	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
Peptidase_M20	PF01546.23	gi|429216371|ref|YP_007174361.1|	-	2.6e-29	102.0	0.0	3.4e-29	101.7	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|429216371|ref|YP_007174361.1|	-	1.2e-16	60.4	0.0	2.2e-16	59.5	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|429216371|ref|YP_007174361.1|	-	0.027	14.2	0.0	0.042	13.5	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	M28
Cupin_2	PF07883.6	gi|429216372|ref|YP_007174362.1|	-	6.5e-10	38.3	0.0	9.2e-10	37.8	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
HgmA	PF04209.8	gi|429216372|ref|YP_007174362.1|	-	1.6e-07	30.1	0.0	2.6e-07	29.4	0.0	1.3	1	1	0	1	1	1	1	homogentisate	1,2-dioxygenase
AraC_binding	PF02311.14	gi|429216372|ref|YP_007174362.1|	-	5e-05	23.0	0.0	5.8e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
MannoseP_isomer	PF01050.13	gi|429216372|ref|YP_007174362.1|	-	0.0021	17.6	0.0	0.0046	16.5	0.0	1.5	2	0	0	2	2	2	1	Mannose-6-phosphate	isomerase
Cupin_4	PF08007.7	gi|429216372|ref|YP_007174362.1|	-	0.011	15.0	0.0	0.017	14.4	0.0	1.4	1	0	0	1	1	1	0	Cupin	superfamily	protein
GPI	PF06560.6	gi|429216372|ref|YP_007174362.1|	-	0.026	13.5	0.0	0.039	12.9	0.0	1.3	1	0	0	1	1	1	0	Glucose-6-phosphate	isomerase	(GPI)
Cupin_1	PF00190.17	gi|429216372|ref|YP_007174362.1|	-	0.033	13.6	0.0	0.048	13.0	0.0	1.3	1	0	0	1	1	1	0	Cupin
Cupin_6	PF12852.2	gi|429216372|ref|YP_007174362.1|	-	0.035	13.7	0.0	0.041	13.5	0.0	1.1	1	0	0	1	1	1	0	Cupin
ARD	PF03079.9	gi|429216372|ref|YP_007174362.1|	-	0.039	13.9	0.1	0.06	13.2	0.0	1.6	1	1	0	1	1	1	0	ARD/ARD'	family
AMP-binding	PF00501.23	gi|429216373|ref|YP_007174363.1|	-	1.9e-62	211.0	0.0	2.2e-62	210.7	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216373|ref|YP_007174363.1|	-	8.6e-08	33.0	0.0	2.4e-07	31.5	0.0	1.8	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
ESCRT-II	PF05871.7	gi|429216373|ref|YP_007174363.1|	-	0.016	15.0	0.8	0.034	14.0	0.0	1.8	2	0	0	2	2	2	0	ESCRT-II	complex	subunit
AMP-binding	PF00501.23	gi|429216374|ref|YP_007174364.1|	-	2.2e-63	214.0	0.0	2.9e-63	213.7	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216374|ref|YP_007174364.1|	-	5e-11	43.3	0.0	2e-10	41.4	0.0	2.0	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|429216375|ref|YP_007174365.1|	-	3e-78	263.0	0.0	3.9e-78	262.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216375|ref|YP_007174365.1|	-	5.8e-15	55.9	0.0	1.3e-14	54.8	0.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF1508	PF07411.7	gi|429216375|ref|YP_007174365.1|	-	0.065	12.6	0.1	0.2	11.0	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1508)
UvsW	PF11637.3	gi|429216375|ref|YP_007174365.1|	-	0.091	12.4	1.2	0.18	11.5	0.1	2.0	2	0	0	2	2	2	0	ATP-dependant	DNA	helicase	UvsW
MORN_2	PF07661.8	gi|429216375|ref|YP_007174365.1|	-	3.7	7.8	5.6	14	6.1	0.3	3.8	3	0	0	3	3	3	0	MORN	repeat	variant
Thiolase_C	PF02803.13	gi|429216377|ref|YP_007174367.1|	-	0.00027	20.3	0.0	0.77	9.2	0.0	2.8	3	0	0	3	3	3	2	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|429216377|ref|YP_007174367.1|	-	0.0094	15.5	0.0	0.83	9.3	0.0	2.6	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
DUF35_N	PF12172.3	gi|429216378|ref|YP_007174368.1|	-	8.5e-10	38.2	0.9	1.3e-09	37.6	0.6	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|429216378|ref|YP_007174368.1|	-	5.3e-07	29.7	0.0	7.9e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
zf-ribbon_3	PF13248.1	gi|429216378|ref|YP_007174368.1|	-	0.012	14.8	1.4	0.019	14.1	0.9	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
NMD3	PF04981.8	gi|429216378|ref|YP_007174368.1|	-	0.013	14.6	0.2	0.02	13.9	0.2	1.2	1	0	0	1	1	1	0	NMD3	family
DZR	PF12773.2	gi|429216378|ref|YP_007174368.1|	-	0.06	13.1	0.2	0.1	12.4	0.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|429216378|ref|YP_007174368.1|	-	0.35	10.4	2.9	0.68	9.4	2.0	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|429216379|ref|YP_007174369.1|	-	0.00037	20.3	0.0	0.00061	19.6	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|429216379|ref|YP_007174369.1|	-	0.0054	16.9	0.0	0.0078	16.4	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
AMP-binding	PF00501.23	gi|429216380|ref|YP_007174370.1|	-	7e-81	271.7	0.0	8.2e-81	271.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216380|ref|YP_007174370.1|	-	1e-16	61.5	0.0	2.4e-16	60.4	0.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
3HCDH_N	PF02737.13	gi|429216381|ref|YP_007174371.1|	-	5.5e-59	198.8	0.5	1e-58	197.9	0.4	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|429216381|ref|YP_007174371.1|	-	1.9e-46	158.2	0.0	3.1e-46	157.4	0.0	1.4	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|429216381|ref|YP_007174371.1|	-	5.2e-39	132.5	0.2	1.6e-22	79.6	0.1	2.9	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429216381|ref|YP_007174371.1|	-	2.3e-05	24.1	0.2	6.4e-05	22.7	0.1	1.8	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Methyltransf_31	PF13847.1	gi|429216381|ref|YP_007174371.1|	-	3e-05	23.6	2.7	7.4e-05	22.3	0.2	2.6	3	0	0	3	3	3	1	Methyltransferase	domain
NAD_binding_2	PF03446.10	gi|429216381|ref|YP_007174371.1|	-	4.6e-05	23.3	0.2	8.9e-05	22.3	0.1	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|429216381|ref|YP_007174371.1|	-	0.00069	19.0	0.9	0.0021	17.4	0.6	1.8	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|429216381|ref|YP_007174371.1|	-	0.00072	19.9	0.8	0.0025	18.2	0.2	2.3	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox	PF00070.22	gi|429216381|ref|YP_007174371.1|	-	0.00084	19.6	0.4	0.0031	17.8	0.3	2.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Methyltransf_18	PF12847.2	gi|429216381|ref|YP_007174371.1|	-	0.017	15.6	0.0	0.049	14.2	0.0	1.8	1	0	0	1	1	1	0	Methyltransferase	domain
ApbA	PF02558.11	gi|429216381|ref|YP_007174371.1|	-	0.088	12.2	0.1	0.17	11.2	0.1	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DrrA_P4M	PF14860.1	gi|429216381|ref|YP_007174371.1|	-	3.2	7.5	8.0	1.3	8.7	1.7	2.6	2	0	0	2	2	2	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
Acyl-CoA_dh_1	PF00441.19	gi|429216382|ref|YP_007174372.1|	-	2.1e-45	154.5	0.1	3e-45	153.9	0.1	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|429216382|ref|YP_007174372.1|	-	1.4e-24	86.8	0.0	2.9e-24	85.8	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|429216382|ref|YP_007174372.1|	-	2.9e-22	77.9	0.2	6.2e-22	76.8	0.2	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|429216382|ref|YP_007174372.1|	-	4.5e-14	52.8	0.0	2.7e-13	50.3	0.0	2.1	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
DUF1073	PF06381.6	gi|429216382|ref|YP_007174372.1|	-	0.041	12.3	0.2	0.44	8.9	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1073)
AMP-binding	PF00501.23	gi|429216383|ref|YP_007174373.1|	-	1.2e-62	211.7	0.0	1.4e-62	211.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216383|ref|YP_007174373.1|	-	1.7e-14	54.4	0.2	3.5e-14	53.4	0.1	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF165	PF02592.10	gi|429216384|ref|YP_007174374.1|	-	1.7e-28	99.6	5.7	1.7e-28	99.6	4.0	2.1	2	0	0	2	2	2	1	Uncharacterized	ACR,	YhhQ	family	COG1738
DUF4407	PF14362.1	gi|429216384|ref|YP_007174374.1|	-	0.66	8.8	3.4	1.7	7.5	0.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
DUF4112	PF13430.1	gi|429216384|ref|YP_007174374.1|	-	0.88	9.5	9.5	0.043	13.7	1.7	2.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4112)
Peptidase_C15	PF01470.12	gi|429216385|ref|YP_007174375.1|	-	3.9e-46	157.4	0.0	4.7e-46	157.2	0.0	1.1	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
SBP_bac_5	PF00496.17	gi|429216386|ref|YP_007174376.1|	-	4.2e-50	170.6	2.7	4.2e-50	170.6	1.9	1.8	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|429216386|ref|YP_007174376.1|	-	2.5e-05	23.9	0.4	2.5e-05	23.9	0.3	3.9	4	1	1	5	5	5	2	PKD	domain
Aldo_ket_red	PF00248.16	gi|429216387|ref|YP_007174377.1|	-	5.7e-72	241.9	0.0	6.5e-72	241.7	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Abhydrolase_3	PF07859.8	gi|429216388|ref|YP_007174378.1|	-	2e-59	200.6	0.0	2.5e-59	200.3	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|429216388|ref|YP_007174378.1|	-	1.8e-06	27.7	0.0	2.5e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF2424	PF10340.4	gi|429216388|ref|YP_007174378.1|	-	2.9e-06	26.1	0.0	3.9e-06	25.7	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2424)
COesterase	PF00135.23	gi|429216388|ref|YP_007174378.1|	-	2.6e-05	23.1	0.0	0.00012	21.0	0.0	1.8	2	0	0	2	2	2	1	Carboxylesterase	family
Abhydrolase_6	PF12697.2	gi|429216388|ref|YP_007174378.1|	-	0.00066	19.6	0.0	0.0016	18.4	0.0	1.6	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|429216388|ref|YP_007174378.1|	-	0.019	14.2	0.0	0.059	12.5	0.0	1.8	1	1	0	1	1	1	0	Prolyl	oligopeptidase	family
AMP-binding_C	PF13193.1	gi|429216389|ref|YP_007174379.1|	-	3.8e-05	24.5	0.0	5.3e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Aminotran_1_2	PF00155.16	gi|429216390|ref|YP_007174380.1|	-	4.2e-10	39.1	0.0	1e-08	34.5	0.0	2.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
PfkB	PF00294.19	gi|429216390|ref|YP_007174380.1|	-	0.014	14.5	0.0	3.1	6.8	0.0	2.2	2	0	0	2	2	2	0	pfkB	family	carbohydrate	kinase
Lactamase_B	PF00753.22	gi|429216391|ref|YP_007174381.1|	-	3.7e-20	72.3	0.0	5.3e-20	71.8	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|429216391|ref|YP_007174381.1|	-	0.00022	20.9	0.0	0.00048	19.8	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|429216391|ref|YP_007174381.1|	-	0.00037	20.0	0.0	0.0006	19.4	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
HTH_43	PF09904.4	gi|429216391|ref|YP_007174381.1|	-	0.092	12.5	0.1	0.57	10.0	0.0	2.4	3	0	0	3	3	3	0	Winged	helix-turn	helix
MFS_1	PF07690.11	gi|429216392|ref|YP_007174382.1|	-	1e-36	126.3	41.6	1e-36	126.3	28.8	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Metallophos_2	PF12850.2	gi|429216393|ref|YP_007174383.1|	-	5.7e-10	39.2	0.0	7e-10	38.9	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|429216393|ref|YP_007174383.1|	-	2.9e-07	30.1	0.1	4.7e-07	29.4	0.1	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
DUF2119	PF09892.4	gi|429216393|ref|YP_007174383.1|	-	0.0034	16.7	0.1	0.016	14.4	0.1	1.9	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
SAF	PF08666.7	gi|429216394|ref|YP_007174384.1|	-	5.3e-12	45.9	1.2	1.1e-11	44.9	0.9	1.5	1	1	0	1	1	1	1	SAF	domain
THDPS_M	PF14789.1	gi|429216394|ref|YP_007174384.1|	-	0.0076	16.1	0.0	0.014	15.3	0.0	1.5	1	0	0	1	1	1	1	Tetrahydrodipicolinate	N-succinyltransferase	middle
GD_AH_C	PF04295.8	gi|429216395|ref|YP_007174385.1|	-	8.5e-143	475.7	0.9	9.4e-143	475.6	0.6	1.0	1	0	0	1	1	1	1	D-galactarate	dehydratase	/	Altronate	hydrolase,	C	terminus
ILVD_EDD	PF00920.16	gi|429216396|ref|YP_007174386.1|	-	6.3e-212	704.6	0.1	7.1e-212	704.4	0.1	1.0	1	0	0	1	1	1	1	Dehydratase	family
DUF1189	PF06691.6	gi|429216397|ref|YP_007174387.1|	-	0.052	12.8	0.1	0.077	12.3	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1189)
TPP_enzyme_N	PF02776.13	gi|429216398|ref|YP_007174388.1|	-	1e-55	187.8	0.0	4.5e-54	182.5	0.0	2.5	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|429216398|ref|YP_007174388.1|	-	9.5e-44	148.6	0.3	1e-42	145.3	0.0	2.7	3	1	1	4	4	4	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|429216398|ref|YP_007174388.1|	-	5.6e-28	97.3	0.0	1.9e-27	95.6	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|429216398|ref|YP_007174388.1|	-	8.6e-05	22.1	0.0	0.00016	21.2	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
DUF2088	PF09861.4	gi|429216398|ref|YP_007174388.1|	-	0.044	12.7	0.0	0.1	11.6	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2088)
ACT_5	PF13710.1	gi|429216399|ref|YP_007174389.1|	-	0.032	14.0	0.1	0.046	13.5	0.0	1.3	1	0	0	1	1	1	0	ACT	domain
TENA_THI-4	PF03070.11	gi|429216399|ref|YP_007174389.1|	-	0.08	12.6	0.0	0.1	12.3	0.0	1.1	1	0	0	1	1	1	0	TENA/THI-4/PQQC	family
IlvN	PF07991.7	gi|429216400|ref|YP_007174390.1|	-	2.1e-70	235.3	0.0	3.4e-70	234.6	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|429216400|ref|YP_007174390.1|	-	2.4e-46	157.2	2.0	3.7e-46	156.6	1.4	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|429216400|ref|YP_007174390.1|	-	9.6e-10	38.5	0.1	4e-07	30.0	0.0	2.1	2	0	0	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|429216400|ref|YP_007174390.1|	-	6.7e-06	25.3	0.0	1.3e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|429216400|ref|YP_007174390.1|	-	1.4e-05	25.3	0.0	3.9e-05	23.9	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|429216400|ref|YP_007174390.1|	-	0.0011	18.8	0.0	0.0023	17.7	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|429216400|ref|YP_007174390.1|	-	0.0017	18.1	1.2	0.99	9.1	0.0	3.0	2	2	0	3	3	3	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
CesA	PF11439.3	gi|429216400|ref|YP_007174390.1|	-	0.072	13.0	0.1	0.15	12.0	0.1	1.6	1	0	0	1	1	1	0	Type	III	secretion	system	filament	chaperone	CesA
FMO-like	PF00743.14	gi|429216400|ref|YP_007174390.1|	-	0.074	11.2	0.0	0.11	10.6	0.0	1.3	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
NAD_binding_10	PF13460.1	gi|429216400|ref|YP_007174390.1|	-	0.11	12.5	0.0	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
NAD_binding_7	PF13241.1	gi|429216400|ref|YP_007174390.1|	-	0.14	12.3	0.0	0.54	10.5	0.0	1.9	2	0	0	2	2	2	0	Putative	NAD(P)-binding
bPH_5	PF10882.3	gi|429216401|ref|YP_007174391.1|	-	1.1e-10	41.1	0.9	1.1e-10	41.1	0.6	1.5	2	0	0	2	2	2	1	Bacterial	PH	domain
bPH_4	PF06713.6	gi|429216401|ref|YP_007174391.1|	-	0.00066	19.5	3.2	0.0073	16.1	0.4	2.5	2	0	0	2	2	2	1	Bacterial	PH	domain
DUF3139	PF11337.3	gi|429216401|ref|YP_007174391.1|	-	0.039	14.2	1.4	0.039	14.2	1.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3139)
MFS_1	PF07690.11	gi|429216402|ref|YP_007174392.1|	-	2.9e-11	42.6	36.5	7.3e-06	24.9	8.4	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
UbiD	PF01977.11	gi|429216403|ref|YP_007174393.1|	-	1.9e-130	434.9	0.0	2.3e-130	434.7	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
MFS_1	PF07690.11	gi|429216404|ref|YP_007174394.1|	-	7.2e-10	38.1	39.2	7.2e-10	38.1	27.2	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
DUF3169	PF11368.3	gi|429216404|ref|YP_007174394.1|	-	0.053	12.7	20.8	0.014	14.5	6.8	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3169)
UbiA	PF01040.13	gi|429216405|ref|YP_007174395.1|	-	9.7e-32	110.1	23.4	1.3e-31	109.7	16.2	1.3	1	1	0	1	1	1	1	UbiA	prenyltransferase	family
PNP_UDP_1	PF01048.15	gi|429216406|ref|YP_007174396.1|	-	8.4e-18	64.1	0.3	1.2e-17	63.6	0.2	1.2	1	0	0	1	1	1	1	Phosphorylase	superfamily
Amidohydro_3	PF07969.6	gi|429216407|ref|YP_007174397.1|	-	8.3e-81	272.2	0.0	9.4e-81	272.0	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|429216407|ref|YP_007174397.1|	-	2.9e-09	36.6	0.1	8.9e-09	35.0	0.1	1.8	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|429216407|ref|YP_007174397.1|	-	7.3e-07	29.1	1.1	0.035	13.7	0.0	3.0	2	1	0	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|429216407|ref|YP_007174397.1|	-	0.00051	20.1	0.0	0.032	14.2	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
DUF4525	PF15027.1	gi|429216408|ref|YP_007174398.1|	-	0.25	10.8	1.7	1.4	8.4	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4525)
KaiC	PF06745.8	gi|429216409|ref|YP_007174399.1|	-	2.1e-49	167.7	4.9	2.5e-49	167.4	3.4	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|429216409|ref|YP_007174399.1|	-	3.9e-12	45.9	0.0	5.7e-12	45.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|429216409|ref|YP_007174399.1|	-	8.2e-08	32.4	0.2	2.3e-07	31.0	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|429216409|ref|YP_007174399.1|	-	1.9e-07	30.2	0.1	2.8e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_17	PF13207.1	gi|429216409|ref|YP_007174399.1|	-	1.8e-06	28.8	0.1	3.2e-06	27.9	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|429216409|ref|YP_007174399.1|	-	2.2e-06	27.9	0.3	5.4e-06	26.7	0.2	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|429216409|ref|YP_007174399.1|	-	2.9e-06	27.1	3.2	9.1e-06	25.5	1.3	2.4	2	1	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|429216409|ref|YP_007174399.1|	-	4.5e-05	23.2	4.2	7.5e-05	22.5	2.9	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
GvpD	PF07088.6	gi|429216409|ref|YP_007174399.1|	-	5e-05	21.8	1.5	0.00017	20.0	1.1	1.6	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
UPF0079	PF02367.12	gi|429216409|ref|YP_007174399.1|	-	0.00011	21.7	0.0	0.0019	17.8	0.0	2.3	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|429216409|ref|YP_007174399.1|	-	0.00013	22.2	0.3	0.00032	20.9	0.2	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|429216409|ref|YP_007174399.1|	-	0.00035	19.7	0.0	0.00078	18.5	0.0	1.6	2	0	0	2	2	1	1	Zeta	toxin
NACHT	PF05729.7	gi|429216409|ref|YP_007174399.1|	-	0.0005	19.7	0.0	0.00084	19.0	0.0	1.5	1	1	0	1	1	1	1	NACHT	domain
DUF2075	PF09848.4	gi|429216409|ref|YP_007174399.1|	-	0.00065	18.7	0.0	0.00091	18.3	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|429216409|ref|YP_007174399.1|	-	0.001	18.5	0.1	0.003	17.0	0.0	1.7	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
Miro	PF08477.8	gi|429216409|ref|YP_007174399.1|	-	0.0019	18.6	0.0	0.0044	17.4	0.0	1.7	1	1	0	1	1	1	1	Miro-like	protein
AAA_19	PF13245.1	gi|429216409|ref|YP_007174399.1|	-	0.0022	17.6	0.0	0.0042	16.8	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
NB-ARC	PF00931.17	gi|429216409|ref|YP_007174399.1|	-	0.0024	16.7	0.0	0.0051	15.6	0.0	1.5	1	1	0	1	1	1	1	NB-ARC	domain
SRP54	PF00448.17	gi|429216409|ref|YP_007174399.1|	-	0.0026	17.2	0.6	0.0042	16.5	0.0	1.6	2	0	0	2	2	1	1	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.1	gi|429216409|ref|YP_007174399.1|	-	0.0027	17.7	0.0	0.0038	17.2	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|429216409|ref|YP_007174399.1|	-	0.0031	17.8	0.1	0.0067	16.7	0.1	1.5	1	1	0	1	1	1	1	ABC	transporter
PhoH	PF02562.11	gi|429216409|ref|YP_007174399.1|	-	0.0048	16.1	0.0	0.0097	15.1	0.0	1.4	1	0	0	1	1	1	1	PhoH-like	protein
ATP-synt_ab	PF00006.20	gi|429216409|ref|YP_007174399.1|	-	0.0055	16.2	0.1	0.0089	15.5	0.1	1.4	1	1	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|429216409|ref|YP_007174399.1|	-	0.0063	15.9	0.1	0.0087	15.5	0.0	1.3	1	0	0	1	1	1	1	AAA-like	domain
AAA_24	PF13479.1	gi|429216409|ref|YP_007174399.1|	-	0.0078	15.8	0.5	0.026	14.1	0.4	1.8	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|429216409|ref|YP_007174399.1|	-	0.0093	14.8	0.0	0.017	14.0	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_5	PF07728.9	gi|429216409|ref|YP_007174399.1|	-	0.013	15.1	0.2	0.98	9.1	0.0	3.1	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.10	gi|429216409|ref|YP_007174399.1|	-	0.017	14.8	0.3	0.044	13.4	0.0	1.9	2	0	0	2	2	2	0	NTPase
RNA_helicase	PF00910.17	gi|429216409|ref|YP_007174399.1|	-	0.022	14.9	0.1	0.045	13.9	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_33	PF13671.1	gi|429216409|ref|YP_007174399.1|	-	0.022	14.6	0.0	0.037	13.9	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Rogdi_lz	PF10259.4	gi|429216409|ref|YP_007174399.1|	-	0.029	13.5	0.2	1.8	7.5	0.5	2.2	1	1	1	2	2	2	0	Rogdi	leucine	zipper	containing	protein
AAA_29	PF13555.1	gi|429216409|ref|YP_007174399.1|	-	0.034	13.6	0.0	0.15	11.5	0.0	2.0	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
RuvB_N	PF05496.7	gi|429216409|ref|YP_007174399.1|	-	0.034	13.1	0.0	0.076	12.0	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Sigma54_activat	PF00158.21	gi|429216409|ref|YP_007174399.1|	-	0.041	13.3	0.0	0.088	12.2	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
KTI12	PF08433.5	gi|429216409|ref|YP_007174399.1|	-	0.057	12.6	0.1	0.16	11.1	0.0	1.8	2	1	1	3	3	3	0	Chromatin	associated	protein	KTI12
ResIII	PF04851.10	gi|429216409|ref|YP_007174399.1|	-	0.074	12.8	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_11	PF13086.1	gi|429216409|ref|YP_007174399.1|	-	0.078	12.5	0.0	0.2	11.2	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|429216409|ref|YP_007174399.1|	-	0.082	11.6	0.0	0.16	10.6	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
FtsK_SpoIIIE	PF01580.13	gi|429216409|ref|YP_007174399.1|	-	0.12	11.8	0.0	0.18	11.2	0.0	1.2	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DUF258	PF03193.11	gi|429216409|ref|YP_007174399.1|	-	0.12	11.5	0.0	0.21	10.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DEAD	PF00270.24	gi|429216409|ref|YP_007174399.1|	-	0.12	11.8	0.0	0.18	11.2	0.0	1.6	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
MMR_HSR1	PF01926.18	gi|429216409|ref|YP_007174399.1|	-	0.22	11.4	2.6	0.75	9.7	1.8	2.2	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_23	PF13476.1	gi|429216409|ref|YP_007174399.1|	-	10	6.4	13.0	2.2e+02	2.0	9.0	2.5	1	1	0	1	1	1	0	AAA	domain
MFS_1	PF07690.11	gi|429216410|ref|YP_007174400.1|	-	5.7e-19	68.0	66.8	6.4e-17	61.2	26.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
FmdA_AmdA	PF03069.10	gi|429216411|ref|YP_007174401.1|	-	9e-54	182.5	0.0	4.5e-30	104.5	0.0	2.1	1	1	1	2	2	2	2	Acetamidase/Formamidase	family
ApbA_C	PF08546.6	gi|429216412|ref|YP_007174402.1|	-	1.4e-21	76.8	0.0	2.6e-21	75.8	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
ApbA	PF02558.11	gi|429216412|ref|YP_007174402.1|	-	1.6e-16	60.0	0.0	3.2e-16	59.1	0.0	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.12	gi|429216412|ref|YP_007174402.1|	-	5e-06	26.8	0.1	1.1e-05	25.7	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|429216412|ref|YP_007174402.1|	-	0.002	17.2	0.1	0.0033	16.5	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|429216412|ref|YP_007174402.1|	-	0.0048	16.2	0.2	0.011	15.0	0.2	1.7	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|429216412|ref|YP_007174402.1|	-	0.0087	15.9	0.0	0.022	14.5	0.0	1.6	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|429216412|ref|YP_007174402.1|	-	0.0087	15.7	0.1	0.022	14.4	0.0	1.6	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Rossmann-like	PF10727.4	gi|429216412|ref|YP_007174402.1|	-	0.056	13.1	0.0	0.088	12.5	0.0	1.3	1	0	0	1	1	1	0	Rossmann-like	domain
IlvN	PF07991.7	gi|429216412|ref|YP_007174402.1|	-	0.083	12.2	0.0	0.22	10.8	0.0	1.7	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429216412|ref|YP_007174402.1|	-	0.11	12.1	0.0	0.29	10.8	0.0	1.8	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DAO	PF01266.19	gi|429216412|ref|YP_007174402.1|	-	0.22	10.4	0.1	0.33	9.8	0.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
SpoIIIAC	PF06686.6	gi|429216412|ref|YP_007174402.1|	-	0.25	11.1	1.4	0.69	9.7	0.3	2.2	2	0	0	2	2	2	0	Stage	III	sporulation	protein	AC/AD	protein	family
Pantoate_transf	PF02548.10	gi|429216413|ref|YP_007174403.1|	-	2.1e-106	354.8	0.0	2.5e-106	354.6	0.0	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.1	gi|429216413|ref|YP_007174403.1|	-	3.2e-07	29.8	0.0	3.1e-06	26.5	0.0	2.1	1	1	1	2	2	2	2	Phosphoenolpyruvate	phosphomutase
AA_permease_2	PF13520.1	gi|429216414|ref|YP_007174404.1|	-	5.3e-30	104.3	59.8	5.3e-30	104.3	41.5	2.1	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|429216414|ref|YP_007174404.1|	-	2.4e-20	72.3	42.7	2.4e-20	72.3	29.6	2.1	1	1	0	2	2	2	2	Amino	acid	permease
HTH_10	PF04967.7	gi|429216415|ref|YP_007174405.1|	-	2.8e-17	62.0	0.1	4.6e-17	61.3	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_5	PF01022.15	gi|429216415|ref|YP_007174405.1|	-	0.018	14.6	0.0	0.051	13.2	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
CoA_transf_3	PF02515.12	gi|429216416|ref|YP_007174406.1|	-	1.5e-52	177.6	0.0	1.8e-52	177.3	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
HMGL-like	PF00682.14	gi|429216417|ref|YP_007174407.1|	-	3.2e-36	125.1	0.1	1.7e-35	122.8	0.0	2.1	2	1	0	2	2	2	1	HMGL-like
F_bP_aldolase	PF01116.15	gi|429216417|ref|YP_007174407.1|	-	0.042	12.9	0.0	0.074	12.1	0.0	1.3	1	0	0	1	1	1	0	Fructose-bisphosphate	aldolase	class-II
DUF3146	PF11344.3	gi|429216417|ref|YP_007174407.1|	-	0.11	11.9	0.0	3.1	7.2	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3146)
MFS_1	PF07690.11	gi|429216418|ref|YP_007174408.1|	-	3.6e-32	111.4	45.6	1.7e-30	105.9	18.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216418|ref|YP_007174408.1|	-	4e-29	101.4	24.6	5.5e-29	101.0	17.0	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
DUF1228	PF06779.9	gi|429216418|ref|YP_007174408.1|	-	0.0054	16.7	0.3	0.0054	16.7	0.2	2.8	2	2	0	2	2	2	1	Protein	of	unknown	function	(DUF1228)
Glycos_transf_2	PF00535.21	gi|429216419|ref|YP_007174409.1|	-	1.9e-19	69.9	0.6	3e-19	69.3	0.4	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|429216419|ref|YP_007174409.1|	-	8.5e-07	28.3	0.1	1.2e-06	27.7	0.1	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_3	PF13641.1	gi|429216419|ref|YP_007174409.1|	-	2.2e-05	24.3	0.0	2.8e-05	24.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_49	PF13896.1	gi|429216419|ref|YP_007174409.1|	-	0.0028	16.8	0.2	0.0063	15.6	0.0	1.5	1	1	0	1	1	1	1	Glycosyl-transferase	for	dystroglycan
Glyco_tranf_2_4	PF13704.1	gi|429216419|ref|YP_007174409.1|	-	0.037	14.3	0.1	0.077	13.3	0.0	1.6	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF3206	PF11472.3	gi|429216419|ref|YP_007174409.1|	-	0.094	12.4	0.5	0.52	10.0	0.1	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3206)
TPP_enzyme_N	PF02776.13	gi|429216420|ref|YP_007174410.1|	-	1.5e-39	135.1	0.0	2.4e-39	134.5	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|429216420|ref|YP_007174410.1|	-	1.6e-35	121.9	0.0	2.6e-34	118.0	0.0	2.3	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|429216420|ref|YP_007174410.1|	-	2.6e-15	56.3	0.0	5.2e-15	55.4	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DXP_synthase_N	PF13292.1	gi|429216420|ref|YP_007174410.1|	-	6.7e-06	25.2	2.8	1e-05	24.6	0.2	2.1	1	1	1	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
XFP_N	PF09364.5	gi|429216420|ref|YP_007174410.1|	-	0.00086	17.9	0.0	0.0015	17.1	0.0	1.3	1	0	0	1	1	1	1	XFP	N-terminal	domain
CW_binding_2	PF04122.7	gi|429216420|ref|YP_007174410.1|	-	0.0026	17.9	0.1	5	7.3	0.0	3.2	2	0	0	2	2	2	2	Putative	cell	wall	binding	repeat	2
2-Hacid_dh_C	PF02826.14	gi|429216421|ref|YP_007174411.1|	-	9.2e-59	197.5	0.1	2.1e-58	196.3	0.0	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|429216421|ref|YP_007174411.1|	-	1.7e-24	85.8	0.0	2e-24	85.5	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|429216421|ref|YP_007174411.1|	-	3e-07	30.4	0.1	6.9e-07	29.2	0.0	1.6	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|429216421|ref|YP_007174411.1|	-	0.013	15.9	0.0	0.084	13.3	0.0	2.4	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.13	gi|429216421|ref|YP_007174411.1|	-	0.016	15.1	0.0	0.056	13.4	0.0	1.8	1	0	0	1	1	1	0	TrkA-N	domain
ThiF	PF00899.16	gi|429216421|ref|YP_007174411.1|	-	0.027	14.2	0.4	4.4	7.1	0.0	2.8	2	2	0	2	2	2	0	ThiF	family
AhpC-TSA	PF00578.16	gi|429216422|ref|YP_007174412.1|	-	3.4e-33	113.9	0.0	3.9e-33	113.7	0.0	1.0	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|429216422|ref|YP_007174412.1|	-	1.1e-20	73.7	0.0	1.2e-20	73.5	0.0	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|429216422|ref|YP_007174412.1|	-	0.078	12.4	0.0	0.078	12.4	0.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF899)
SCO1-SenC	PF02630.9	gi|429216422|ref|YP_007174412.1|	-	0.13	11.8	1.6	1.1	8.8	0.2	2.2	1	1	1	2	2	2	0	SCO1/SenC
AA_permease	PF00324.16	gi|429216423|ref|YP_007174413.1|	-	2e-28	98.9	46.4	2.5e-28	98.6	32.2	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|429216423|ref|YP_007174413.1|	-	6e-28	97.5	55.6	1.4e-27	96.3	38.5	1.5	1	1	0	1	1	1	1	Amino	acid	permease
DUF2669	PF10876.3	gi|429216423|ref|YP_007174413.1|	-	0.073	12.7	0.0	0.14	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2669)
TusA	PF01206.12	gi|429216424|ref|YP_007174414.1|	-	8.6e-17	60.5	0.0	9.6e-17	60.3	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
Peptidase_M20	PF01546.23	gi|429216425|ref|YP_007174415.1|	-	3.6e-34	117.9	0.0	4.6e-34	117.5	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|429216425|ref|YP_007174415.1|	-	4.8e-17	61.7	0.0	1.1e-16	60.5	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_S58	PF03576.9	gi|429216426|ref|YP_007174416.1|	-	1.9e-27	96.3	0.1	2.5e-27	95.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	S58
DUF1626	PF07788.6	gi|429216427|ref|YP_007174417.1|	-	2e-16	59.5	0.1	3.3e-16	58.8	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1626)
MAD	PF05557.8	gi|429216427|ref|YP_007174417.1|	-	2.6e-05	22.5	9.2	3.2e-05	22.2	6.3	1.1	1	0	0	1	1	1	1	Mitotic	checkpoint	protein
AAA_27	PF13514.1	gi|429216427|ref|YP_007174417.1|	-	4.1e-05	21.5	3.2	4.9e-05	21.2	2.2	1.0	1	0	0	1	1	1	1	AAA	domain
DUF2959	PF11172.3	gi|429216427|ref|YP_007174417.1|	-	0.0001	22.1	3.8	0.03	14.0	0.3	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2959)
DUF948	PF06103.6	gi|429216427|ref|YP_007174417.1|	-	0.00011	21.9	7.1	0.014	15.2	5.4	2.9	1	1	1	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF948)
DUF342	PF03961.8	gi|429216427|ref|YP_007174417.1|	-	0.00011	20.7	6.7	0.00015	20.3	4.7	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
HAUS-augmin3	PF14932.1	gi|429216427|ref|YP_007174417.1|	-	0.00013	21.2	6.3	0.00042	19.5	4.5	1.6	2	0	0	2	2	2	1	HAUS	augmin-like	complex	subunit	3
ATG16	PF08614.6	gi|429216427|ref|YP_007174417.1|	-	0.00022	21.0	8.3	0.00037	20.3	5.8	1.4	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
Orthopox_A5L	PF06193.6	gi|429216427|ref|YP_007174417.1|	-	0.00046	20.1	9.6	0.57	10.1	0.3	3.3	1	1	2	3	3	3	2	Orthopoxvirus	A5L	protein-like
IncA	PF04156.9	gi|429216427|ref|YP_007174417.1|	-	0.0006	19.4	6.3	0.0008	19.0	4.3	1.3	1	0	0	1	1	1	1	IncA	protein
V_ATPase_I	PF01496.14	gi|429216427|ref|YP_007174417.1|	-	0.00071	17.5	4.3	0.00088	17.2	3.0	1.2	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
Atg14	PF10186.4	gi|429216427|ref|YP_007174417.1|	-	0.0008	18.4	11.5	0.0011	17.9	8.0	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Spc7	PF08317.6	gi|429216427|ref|YP_007174417.1|	-	0.0008	18.1	7.9	0.0012	17.6	5.5	1.3	1	0	0	1	1	1	1	Spc7	kinetochore	protein
TBPIP	PF07106.8	gi|429216427|ref|YP_007174417.1|	-	0.00083	18.9	11.8	0.0015	18.1	8.0	1.6	1	1	0	1	1	1	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
APG6	PF04111.7	gi|429216427|ref|YP_007174417.1|	-	0.0011	18.0	8.3	0.0017	17.4	5.8	1.3	1	0	0	1	1	1	1	Autophagy	protein	Apg6
Filament	PF00038.16	gi|429216427|ref|YP_007174417.1|	-	0.0012	18.4	8.1	0.0016	17.9	5.6	1.2	1	0	0	1	1	1	1	Intermediate	filament	protein
OmpH	PF03938.9	gi|429216427|ref|YP_007174417.1|	-	0.0013	18.6	0.5	0.0021	18.0	0.4	1.3	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
ERM	PF00769.14	gi|429216427|ref|YP_007174417.1|	-	0.0015	18.0	11.5	0.0022	17.5	8.0	1.2	1	0	0	1	1	1	1	Ezrin/radixin/moesin	family
Nup54	PF13874.1	gi|429216427|ref|YP_007174417.1|	-	0.0016	18.1	5.7	0.0025	17.5	4.0	1.2	1	0	0	1	1	1	1	Nucleoporin	complex	subunit	54
TPR_MLP1_2	PF07926.7	gi|429216427|ref|YP_007174417.1|	-	0.0016	18.1	10.6	0.24	11.1	2.6	2.6	1	1	1	2	2	2	2	TPR/MLP1/MLP2-like	protein
HALZ	PF02183.13	gi|429216427|ref|YP_007174417.1|	-	0.0026	17.4	15.2	0.36	10.5	1.2	4.0	2	1	3	5	5	5	1	Homeobox	associated	leucine	zipper
Syntaxin_2	PF14523.1	gi|429216427|ref|YP_007174417.1|	-	0.0043	17.0	10.3	0.14	12.2	7.2	2.3	1	1	0	1	1	1	1	Syntaxin-like	protein
Cast	PF10174.4	gi|429216427|ref|YP_007174417.1|	-	0.0058	14.7	9.2	0.0072	14.4	6.4	1.1	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
WEMBL	PF05701.6	gi|429216427|ref|YP_007174417.1|	-	0.0067	14.9	11.3	0.0088	14.5	7.8	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
DUF2353	PF09789.4	gi|429216427|ref|YP_007174417.1|	-	0.0068	15.7	8.3	0.011	14.9	5.8	1.4	1	0	0	1	1	1	1	Uncharacterized	coiled-coil	protein	(DUF2353)
AAA_13	PF13166.1	gi|429216427|ref|YP_007174417.1|	-	0.007	14.8	6.7	0.0087	14.5	4.6	1.1	1	0	0	1	1	1	1	AAA	domain
TMF_TATA_bd	PF12325.3	gi|429216427|ref|YP_007174417.1|	-	0.0088	15.7	17.4	0.43	10.3	7.6	2.6	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	TATA	binding
LXG	PF04740.7	gi|429216427|ref|YP_007174417.1|	-	0.014	15.1	4.4	0.025	14.3	3.1	1.3	1	0	0	1	1	1	0	LXG	domain	of	WXG	superfamily
DUF972	PF06156.8	gi|429216427|ref|YP_007174417.1|	-	0.015	15.6	17.7	0.019	15.2	5.6	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF972)
Syntaxin	PF00804.20	gi|429216427|ref|YP_007174417.1|	-	0.015	15.4	6.2	0.03	14.4	4.3	1.6	1	0	0	1	1	1	0	Syntaxin
Seryl_tRNA_N	PF02403.17	gi|429216427|ref|YP_007174417.1|	-	0.017	15.1	12.6	0.064	13.2	8.2	2.2	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF932	PF06067.6	gi|429216427|ref|YP_007174417.1|	-	0.02	14.1	0.7	0.031	13.5	0.5	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF932)
Rab5-bind	PF09311.6	gi|429216427|ref|YP_007174417.1|	-	0.026	14.4	6.5	0.055	13.3	4.5	1.5	1	0	0	1	1	1	0	Rabaptin-like	protein
DUF3782	PF12644.2	gi|429216427|ref|YP_007174417.1|	-	0.029	14.1	8.6	0.18	11.6	6.0	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
CENP-Q	PF13094.1	gi|429216427|ref|YP_007174417.1|	-	0.029	14.3	6.3	0.046	13.7	4.4	1.4	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
GAS	PF13851.1	gi|429216427|ref|YP_007174417.1|	-	0.029	13.5	11.6	0.055	12.6	8.0	1.4	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
USP8_interact	PF08941.5	gi|429216427|ref|YP_007174417.1|	-	0.031	13.6	1.7	0.045	13.0	1.2	1.4	1	0	0	1	1	1	0	USP8	interacting
TerB	PF05099.8	gi|429216427|ref|YP_007174417.1|	-	0.032	13.9	2.0	2.5	7.8	0.1	2.7	2	1	1	3	3	2	0	Tellurite	resistance	protein	TerB
DegS	PF05384.6	gi|429216427|ref|YP_007174417.1|	-	0.033	13.3	8.6	0.36	10.0	0.7	2.5	1	1	1	2	2	2	0	Sensor	protein	DegS
DivIC	PF04977.10	gi|429216427|ref|YP_007174417.1|	-	0.037	13.4	17.9	0.15	11.5	2.8	3.7	1	1	3	4	4	4	0	Septum	formation	initiator
COG2	PF06148.6	gi|429216427|ref|YP_007174417.1|	-	0.042	13.7	7.0	0.095	12.5	4.8	1.7	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Allexi_40kDa	PF05549.6	gi|429216427|ref|YP_007174417.1|	-	0.044	13.0	2.9	0.062	12.5	1.4	1.4	1	1	0	1	1	1	0	Allexivirus	40kDa	protein
Macoilin	PF09726.4	gi|429216427|ref|YP_007174417.1|	-	0.048	11.9	7.0	0.057	11.6	4.9	1.1	1	0	0	1	1	1	0	Transmembrane	protein
Reo_sigmaC	PF04582.7	gi|429216427|ref|YP_007174417.1|	-	0.049	12.7	0.2	0.064	12.4	0.1	1.1	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
ADIP	PF11559.3	gi|429216427|ref|YP_007174417.1|	-	0.055	13.3	11.0	0.087	12.7	7.6	1.3	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
HAUS5	PF14817.1	gi|429216427|ref|YP_007174417.1|	-	0.056	11.9	7.3	0.08	11.4	5.0	1.2	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	5
DUF4201	PF13870.1	gi|429216427|ref|YP_007174417.1|	-	0.09	12.2	15.3	0.25	10.7	10.6	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
Cas_Csx8	PF09657.5	gi|429216427|ref|YP_007174417.1|	-	0.092	11.4	9.5	0.064	11.9	1.4	2.1	1	1	1	2	2	2	0	CRISPR-associated	protein	Csx8	(Cas_Csx8)
DUF2968	PF11180.3	gi|429216427|ref|YP_007174417.1|	-	0.11	11.9	6.0	0.16	11.3	4.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
Bacillus_HBL	PF05791.6	gi|429216427|ref|YP_007174417.1|	-	0.11	11.8	4.8	0.19	11.0	3.3	1.5	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF4618	PF15397.1	gi|429216427|ref|YP_007174417.1|	-	0.14	11.4	11.5	0.64	9.3	3.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
DUF1875	PF08961.5	gi|429216427|ref|YP_007174417.1|	-	0.2	10.9	13.0	0.28	10.4	0.7	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF1875)
CENP-F_leu_zip	PF10473.4	gi|429216427|ref|YP_007174417.1|	-	0.25	11.1	18.3	0.47	10.3	9.6	2.2	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Uso1_p115_C	PF04871.8	gi|429216427|ref|YP_007174417.1|	-	0.29	11.0	7.7	0.59	10.0	5.3	1.5	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
HOOK	PF05622.7	gi|429216427|ref|YP_007174417.1|	-	0.3	8.8	12.0	0.61	7.8	7.5	1.4	1	1	0	1	1	1	0	HOOK	protein
CALCOCO1	PF07888.6	gi|429216427|ref|YP_007174417.1|	-	0.41	8.8	10.2	0.52	8.5	7.0	1.1	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
BLOC1_2	PF10046.4	gi|429216427|ref|YP_007174417.1|	-	0.43	10.7	13.9	2.7	8.1	5.0	2.9	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Tnp_P_element	PF12017.3	gi|429216427|ref|YP_007174417.1|	-	0.43	9.7	5.2	0.47	9.6	0.4	2.1	1	1	1	2	2	2	0	Transposase	protein
Rootletin	PF15035.1	gi|429216427|ref|YP_007174417.1|	-	0.5	10.3	17.0	2	8.3	11.8	1.9	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
Spc24	PF08286.6	gi|429216427|ref|YP_007174417.1|	-	0.51	10.0	14.5	1.7e+02	1.9	10.0	2.9	1	1	0	1	1	1	0	Spc24	subunit	of	Ndc80
ToxN_toxin	PF13958.1	gi|429216427|ref|YP_007174417.1|	-	0.53	9.9	6.7	2.7	7.6	4.7	2.1	1	1	0	1	1	1	0	Toxin	ToxN,	type	III	toxin-antitoxin	system
Mnd1	PF03962.10	gi|429216427|ref|YP_007174417.1|	-	0.57	9.8	10.0	2.2	7.9	7.0	1.6	1	1	0	1	1	1	0	Mnd1	family
DUF2935	PF11155.3	gi|429216427|ref|YP_007174417.1|	-	0.58	10.2	5.4	1.4	8.9	2.2	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2935)
bZIP_1	PF00170.16	gi|429216427|ref|YP_007174417.1|	-	0.58	10.1	21.5	0.18	11.7	3.7	3.2	2	1	1	3	3	2	0	bZIP	transcription	factor
DUF1664	PF07889.7	gi|429216427|ref|YP_007174417.1|	-	0.64	9.8	6.2	1.8	8.3	4.3	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
DUF2730	PF10805.3	gi|429216427|ref|YP_007174417.1|	-	0.68	9.7	9.7	0.99	9.1	5.4	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
CCDC155	PF14662.1	gi|429216427|ref|YP_007174417.1|	-	0.75	9.3	15.6	2.3	7.7	10.7	1.7	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
zf-C4H2	PF10146.4	gi|429216427|ref|YP_007174417.1|	-	0.79	9.7	12.5	1.3	8.9	8.7	1.4	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Sec20	PF03908.8	gi|429216427|ref|YP_007174417.1|	-	0.82	9.4	5.0	2.7	7.7	0.9	2.5	1	1	1	2	2	2	0	Sec20
Cep57_CLD_2	PF14197.1	gi|429216427|ref|YP_007174417.1|	-	0.84	9.6	17.3	41	4.2	12.0	2.8	1	1	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
Tup_N	PF08581.5	gi|429216427|ref|YP_007174417.1|	-	0.88	9.8	9.8	0.3	11.2	3.2	2.3	1	1	2	3	3	3	0	Tup	N-terminal
Prominin	PF05478.6	gi|429216427|ref|YP_007174417.1|	-	1.1	6.7	6.0	2.3	5.6	4.1	1.4	1	1	0	1	1	1	0	Prominin
Laminin_II	PF06009.7	gi|429216427|ref|YP_007174417.1|	-	1.4	8.6	8.2	2.4	7.8	5.7	1.3	1	0	0	1	1	1	0	Laminin	Domain	II
DUF2203	PF09969.4	gi|429216427|ref|YP_007174417.1|	-	1.4	9.1	7.5	16	5.7	5.2	2.4	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
YscO	PF07321.7	gi|429216427|ref|YP_007174417.1|	-	2.5	7.9	11.7	4.6	7.0	8.1	1.4	1	1	0	1	1	1	0	Type	III	secretion	protein	YscO
NUDE_C	PF04880.8	gi|429216427|ref|YP_007174417.1|	-	3.1	8.1	15.7	9.6	6.5	1.0	2.4	1	1	1	2	2	2	0	NUDE	protein,	C-terminal	conserved	region
UPF0449	PF15136.1	gi|429216427|ref|YP_007174417.1|	-	3.3	7.9	7.2	8.9	6.5	1.7	2.6	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
DUF4446	PF14584.1	gi|429216427|ref|YP_007174417.1|	-	3.8	7.3	8.2	3.4	7.4	2.5	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DUF904	PF06005.7	gi|429216427|ref|YP_007174417.1|	-	4.3	7.6	24.0	2.6e+02	1.9	14.3	3.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
DUF3166	PF11365.3	gi|429216427|ref|YP_007174417.1|	-	4.6	7.7	14.3	2.4	8.6	0.8	2.9	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF3166)
Mt_ATP-synt_B	PF05405.9	gi|429216427|ref|YP_007174417.1|	-	8.6	5.7	10.9	1.7	8.0	5.1	1.5	2	0	0	2	2	1	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
MFS_1	PF07690.11	gi|429216428|ref|YP_007174418.1|	-	4e-27	94.8	56.4	2.1e-13	49.7	16.2	2.4	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216428|ref|YP_007174418.1|	-	1.9e-23	82.8	46.0	6.4e-16	57.9	9.5	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|429216428|ref|YP_007174418.1|	-	0.00037	20.2	2.7	0.00073	19.2	0.2	2.9	2	0	0	2	2	2	1	MFS_1	like	family
Aldedh	PF00171.17	gi|429216429|ref|YP_007174419.1|	-	8.4e-137	456.2	0.0	9.5e-137	456.0	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
Phage_min_cap2	PF06152.6	gi|429216429|ref|YP_007174419.1|	-	0.053	12.5	0.1	0.089	11.7	0.1	1.3	1	0	0	1	1	1	0	Phage	minor	capsid	protein	2
CmcH_NodU	PF02543.10	gi|429216429|ref|YP_007174419.1|	-	0.062	12.4	0.0	1.4	7.9	0.0	2.2	1	1	0	2	2	2	0	Carbamoyltransferase
Aminotran_3	PF00202.16	gi|429216430|ref|YP_007174420.1|	-	7.5e-89	297.9	0.0	9.1e-89	297.6	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
ABC2_membrane_2	PF12679.2	gi|429216431|ref|YP_007174421.1|	-	2.3e-14	52.9	8.1	4.2e-14	52.0	5.6	1.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|429216431|ref|YP_007174421.1|	-	0.0012	18.1	34.0	0.0012	18.1	23.6	2.8	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|429216431|ref|YP_007174421.1|	-	1.1	8.4	58.5	5.8	5.9	40.6	2.1	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
TPR_11	PF13414.1	gi|429216432|ref|YP_007174422.1|	-	1.1e-11	44.1	0.9	9.2e-07	28.4	0.0	2.3	2	0	0	2	2	2	2	TPR	repeat
TPR_2	PF07719.12	gi|429216432|ref|YP_007174422.1|	-	3e-10	39.2	4.1	0.0006	19.5	0.3	3.2	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|429216432|ref|YP_007174422.1|	-	4.9e-10	39.1	3.4	8.1e-07	28.8	0.2	2.4	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|429216432|ref|YP_007174422.1|	-	3.2e-09	35.9	3.8	0.0014	18.1	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|429216432|ref|YP_007174422.1|	-	5.6e-08	32.7	1.7	0.015	15.7	0.0	4.3	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|429216432|ref|YP_007174422.1|	-	3e-07	30.9	0.0	0.00066	20.2	0.0	2.2	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|429216432|ref|YP_007174422.1|	-	9.3e-07	28.2	11.0	0.062	13.1	0.1	4.0	2	1	2	4	4	4	3	Tetratricopeptide	repeat
CmcH_NodU	PF02543.10	gi|429216432|ref|YP_007174422.1|	-	4.6e-05	22.7	0.1	7.9e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Carbamoyltransferase
TPR_14	PF13428.1	gi|429216432|ref|YP_007174422.1|	-	9.4e-05	22.7	0.0	0.77	10.5	0.0	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|429216432|ref|YP_007174422.1|	-	0.00032	20.6	1.2	0.11	12.7	0.0	3.4	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|429216432|ref|YP_007174422.1|	-	0.0036	17.0	0.1	3	7.8	0.0	2.9	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|429216432|ref|YP_007174422.1|	-	0.0049	15.9	0.2	0.099	11.6	0.1	2.0	1	1	1	2	2	2	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|429216432|ref|YP_007174422.1|	-	0.011	15.8	3.7	0.021	14.9	0.8	2.5	1	1	2	3	3	3	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
MIT	PF04212.13	gi|429216432|ref|YP_007174422.1|	-	0.04	13.7	2.8	0.25	11.2	0.1	2.9	3	0	0	3	3	3	0	MIT	(microtubule	interacting	and	transport)	domain
TPR_5	PF12688.2	gi|429216432|ref|YP_007174422.1|	-	0.046	13.7	0.0	0.073	13.1	0.0	1.3	1	0	0	1	1	1	0	Tetratrico	peptide	repeat
DUF2225	PF09986.4	gi|429216432|ref|YP_007174422.1|	-	0.054	12.9	2.7	0.078	12.4	1.4	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
TPR_19	PF14559.1	gi|429216432|ref|YP_007174422.1|	-	0.055	13.8	0.1	0.87	9.9	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Peripla_BP_2	PF01497.13	gi|429216433|ref|YP_007174423.1|	-	9.2e-33	113.3	0.0	1.2e-32	112.9	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF336	PF03928.9	gi|429216434|ref|YP_007174424.1|	-	3.5e-36	123.9	0.0	1e-19	70.6	0.0	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF336)
DAO	PF01266.19	gi|429216435|ref|YP_007174425.1|	-	5.9e-52	176.7	0.0	7.4e-52	176.4	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|429216435|ref|YP_007174425.1|	-	1.3e-09	37.8	0.0	3.3e-09	36.6	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|429216435|ref|YP_007174425.1|	-	6.3e-09	36.1	0.0	0.0023	18.0	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429216435|ref|YP_007174425.1|	-	1.4e-08	35.0	0.5	0.0006	20.1	0.1	2.9	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|429216435|ref|YP_007174425.1|	-	7.5e-08	31.2	0.4	0.00022	19.8	0.2	2.3	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|429216435|ref|YP_007174425.1|	-	1e-06	28.1	0.1	4.6e-06	25.9	0.1	1.9	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|429216435|ref|YP_007174425.1|	-	2e-06	27.8	0.1	8.8e-06	25.7	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|429216435|ref|YP_007174425.1|	-	2.9e-06	26.4	0.2	6.5e-06	25.2	0.1	1.6	2	0	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|429216435|ref|YP_007174425.1|	-	7.5e-06	25.0	0.1	0.00021	20.3	0.1	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|429216435|ref|YP_007174425.1|	-	5.3e-05	22.4	0.4	0.00014	21.0	0.3	1.7	1	0	0	1	1	1	1	Thi4	family
FAD_oxidored	PF12831.2	gi|429216435|ref|YP_007174425.1|	-	0.00061	18.9	0.0	0.12	11.4	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|429216435|ref|YP_007174425.1|	-	0.0013	17.7	0.1	0.002	17.0	0.0	1.3	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Amino_oxidase	PF01593.19	gi|429216435|ref|YP_007174425.1|	-	0.0015	17.6	0.0	0.83	8.6	0.0	2.1	2	0	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
NAD_binding_9	PF13454.1	gi|429216435|ref|YP_007174425.1|	-	0.0018	18.0	0.0	0.011	15.5	0.0	2.0	2	0	0	2	2	2	1	FAD-NAD(P)-binding
TrkA_N	PF02254.13	gi|429216435|ref|YP_007174425.1|	-	0.0026	17.7	0.1	0.0052	16.7	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
Trp_halogenase	PF04820.9	gi|429216435|ref|YP_007174425.1|	-	0.004	15.8	0.4	0.043	12.4	0.1	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
AMP-binding	PF00501.23	gi|429216436|ref|YP_007174426.1|	-	8.6e-87	291.2	0.0	1.1e-86	290.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216436|ref|YP_007174426.1|	-	3.1e-17	63.2	0.1	6.1e-17	62.3	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF996	PF06195.8	gi|429216437|ref|YP_007174427.1|	-	3.2e-18	66.0	22.5	1e-17	64.4	14.4	2.4	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF996)
DUF973	PF06157.6	gi|429216437|ref|YP_007174427.1|	-	0.017	14.1	24.7	1.1	8.1	13.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF973)
ABC2_membrane_5	PF13346.1	gi|429216437|ref|YP_007174427.1|	-	0.034	13.4	26.2	0.052	12.8	18.2	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2207	PF09972.4	gi|429216437|ref|YP_007174427.1|	-	0.12	10.9	0.0	0.12	10.9	0.0	2.9	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
DUF606	PF04657.8	gi|429216437|ref|YP_007174427.1|	-	0.19	11.8	11.3	0.036	14.1	4.5	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF606
ABC2_membrane_4	PF12730.2	gi|429216437|ref|YP_007174427.1|	-	0.31	10.1	31.0	0.43	9.7	21.5	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF4271	PF14093.1	gi|429216437|ref|YP_007174427.1|	-	3.7	7.1	22.4	0.083	12.5	2.4	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4271)
Keratin_assoc	PF09775.4	gi|429216437|ref|YP_007174427.1|	-	6.9	6.2	10.5	22	4.6	7.3	1.9	1	1	0	1	1	1	0	Keratinocyte-associated	protein	2
DUF3784	PF12650.2	gi|429216437|ref|YP_007174427.1|	-	6.9	6.6	23.1	2.9	7.8	6.2	3.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3784)
AAA_10	PF12846.2	gi|429216438|ref|YP_007174428.1|	-	2.2e-16	60.1	0.2	8.9e-11	41.7	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|429216438|ref|YP_007174428.1|	-	4.8e-15	56.0	1.2	1.3e-13	51.3	0.8	2.4	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|429216438|ref|YP_007174428.1|	-	2.5e-12	45.9	0.0	5.9e-06	24.9	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA	PF00004.24	gi|429216438|ref|YP_007174428.1|	-	1.2e-07	32.0	0.2	0.0017	18.5	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|429216438|ref|YP_007174428.1|	-	8.7e-07	28.6	0.1	0.0082	15.6	0.1	2.2	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|429216438|ref|YP_007174428.1|	-	5.2e-06	25.3	0.1	8.9e-06	24.5	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ResIII	PF04851.10	gi|429216438|ref|YP_007174428.1|	-	0.0013	18.5	0.1	0.5	10.1	0.0	2.5	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|429216438|ref|YP_007174428.1|	-	0.003	17.7	0.0	0.76	9.9	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|429216438|ref|YP_007174428.1|	-	0.0035	17.6	0.4	0.04	14.2	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|429216438|ref|YP_007174428.1|	-	0.0057	16.3	0.4	1.7	8.2	0.1	2.3	2	0	0	2	2	2	1	NACHT	domain
ABC_tran	PF00005.22	gi|429216438|ref|YP_007174428.1|	-	0.0065	16.7	0.6	0.018	15.3	0.4	1.8	1	1	0	1	1	1	1	ABC	transporter
DEAD	PF00270.24	gi|429216438|ref|YP_007174428.1|	-	0.011	15.2	0.0	5.2	6.5	0.0	2.4	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
AAA_25	PF13481.1	gi|429216438|ref|YP_007174428.1|	-	0.024	14.0	0.0	7.4	5.9	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|429216438|ref|YP_007174428.1|	-	0.034	13.0	0.0	0.065	12.1	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
cobW	PF02492.14	gi|429216438|ref|YP_007174428.1|	-	0.046	13.1	0.2	0.13	11.6	0.1	1.8	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|429216438|ref|YP_007174428.1|	-	0.057	14.2	1.1	0.25	12.1	0.8	2.3	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|429216438|ref|YP_007174428.1|	-	0.068	12.2	0.0	0.13	11.2	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Zot	PF05707.7	gi|429216438|ref|YP_007174428.1|	-	0.12	11.7	0.0	0.43	10.0	0.0	1.8	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_23	PF13476.1	gi|429216438|ref|YP_007174428.1|	-	4.2	7.6	12.5	3.1e+02	1.5	8.7	2.8	1	1	0	1	1	1	0	AAA	domain
NurA	PF09376.5	gi|429216439|ref|YP_007174429.1|	-	3.2e-11	43.1	2.6	4.7e-11	42.6	1.8	1.2	1	0	0	1	1	1	1	NurA	domain
MMPL	PF03176.10	gi|429216440|ref|YP_007174430.1|	-	8.2e-56	189.1	27.6	2.7e-29	101.9	3.6	2.4	2	1	1	3	3	3	2	MMPL	family
Plant_vir_prot	PF01307.12	gi|429216440|ref|YP_007174430.1|	-	4.7	6.9	6.9	3.9	7.2	0.0	3.2	3	0	0	3	3	3	0	Plant	viral	movement	protein
DUF917	PF06032.7	gi|429216442|ref|YP_007174432.1|	-	1e-87	293.9	0.0	1.2e-87	293.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
SBP_bac_5	PF00496.17	gi|429216444|ref|YP_007174434.1|	-	1.3e-46	159.1	5.1	2.4e-46	158.2	3.6	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF2333	PF10095.4	gi|429216444|ref|YP_007174434.1|	-	0.34	9.4	3.0	0.58	8.7	2.1	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2333)
Shisa	PF13908.1	gi|429216444|ref|YP_007174434.1|	-	1.8	8.7	6.0	3.5	7.7	4.1	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
Mononeg_RNA_pol	PF00946.14	gi|429216444|ref|YP_007174434.1|	-	2.6	5.2	3.5	3.7	4.7	2.4	1.1	1	0	0	1	1	1	0	Mononegavirales	RNA	dependent	RNA	polymerase
Mucin	PF01456.12	gi|429216444|ref|YP_007174434.1|	-	3.8	7.2	29.0	10	5.8	20.1	1.7	1	0	0	1	1	1	0	Mucin-like	glycoprotein
NurA	PF09376.5	gi|429216445|ref|YP_007174435.1|	-	6.5e-12	45.4	3.6	2e-11	43.8	2.5	1.7	1	1	0	1	1	1	1	NurA	domain
DUF2621	PF11084.3	gi|429216445|ref|YP_007174435.1|	-	0.066	12.8	0.3	0.35	10.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2621)
AAA_10	PF12846.2	gi|429216446|ref|YP_007174436.1|	-	1.1e-20	74.3	1.7	5.8e-19	68.6	1.2	2.7	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|429216446|ref|YP_007174436.1|	-	1.7e-11	44.3	5.0	4.8e-10	39.6	0.0	3.6	3	1	1	4	4	4	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|429216446|ref|YP_007174436.1|	-	5.2e-11	42.4	0.4	4.7e-06	26.2	0.2	2.5	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
DUF853	PF05872.7	gi|429216446|ref|YP_007174436.1|	-	3.9e-09	35.3	0.1	2.8e-05	22.6	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_22	PF13401.1	gi|429216446|ref|YP_007174436.1|	-	1.4e-08	34.8	0.5	0.0052	16.9	0.0	4.0	3	1	1	4	4	3	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|429216446|ref|YP_007174436.1|	-	3e-07	29.4	0.0	1.8e-06	26.8	0.0	1.9	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.24	gi|429216446|ref|YP_007174436.1|	-	5.1e-07	29.9	0.1	0.0028	17.8	0.1	3.0	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SE	PF00437.15	gi|429216446|ref|YP_007174436.1|	-	3.6e-05	22.8	0.1	0.0002	20.3	0.0	2.1	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
DEAD	PF00270.24	gi|429216446|ref|YP_007174436.1|	-	5.6e-05	22.6	0.0	0.19	11.2	0.0	2.5	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
AAA_25	PF13481.1	gi|429216446|ref|YP_007174436.1|	-	6.1e-05	22.5	0.5	0.32	10.3	0.1	2.9	2	1	1	3	3	3	2	AAA	domain
ResIII	PF04851.10	gi|429216446|ref|YP_007174436.1|	-	7.5e-05	22.6	0.0	0.68	9.7	0.0	3.1	3	0	0	3	3	3	2	Type	III	restriction	enzyme,	res	subunit
Zot	PF05707.7	gi|429216446|ref|YP_007174436.1|	-	0.00015	21.2	0.4	0.00093	18.7	0.1	2.2	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_18	PF13238.1	gi|429216446|ref|YP_007174436.1|	-	0.0012	19.1	1.4	0.0054	17.0	0.1	2.7	2	0	0	2	2	2	1	AAA	domain
G-alpha	PF00503.15	gi|429216446|ref|YP_007174436.1|	-	0.0016	17.1	1.2	0.0047	15.6	0.8	1.8	1	1	0	1	1	1	1	G-protein	alpha	subunit
AAA_23	PF13476.1	gi|429216446|ref|YP_007174436.1|	-	0.0018	18.6	6.3	0.0018	18.6	4.4	3.0	2	1	0	2	2	2	1	AAA	domain
Miro	PF08477.8	gi|429216446|ref|YP_007174436.1|	-	0.0023	18.4	0.2	0.014	15.9	0.0	2.5	3	0	0	3	3	2	1	Miro-like	protein
cobW	PF02492.14	gi|429216446|ref|YP_007174436.1|	-	0.0025	17.2	0.4	0.0059	16.0	0.0	1.8	2	0	0	2	2	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|429216446|ref|YP_007174436.1|	-	0.0029	17.3	0.0	0.0066	16.1	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|429216446|ref|YP_007174436.1|	-	0.0037	17.1	3.4	0.014	15.3	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
Pox_A32	PF04665.7	gi|429216446|ref|YP_007174436.1|	-	0.0053	16.0	0.3	0.013	14.7	0.0	1.8	2	0	0	2	2	1	1	Poxvirus	A32	protein
DUF2075	PF09848.4	gi|429216446|ref|YP_007174436.1|	-	0.0053	15.7	0.0	0.31	9.9	0.0	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
Arch_ATPase	PF01637.13	gi|429216446|ref|YP_007174436.1|	-	0.006	16.3	0.6	0.043	13.5	0.1	2.6	2	1	0	2	2	2	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|429216446|ref|YP_007174436.1|	-	0.0088	15.5	0.0	0.02	14.3	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|429216446|ref|YP_007174436.1|	-	0.0099	15.5	0.0	0.043	13.4	0.0	2.3	2	0	0	2	2	1	1	NACHT	domain
ABC_tran	PF00005.22	gi|429216446|ref|YP_007174436.1|	-	0.012	15.8	3.1	0.013	15.8	0.5	2.2	2	1	0	2	2	2	0	ABC	transporter
AAA_16	PF13191.1	gi|429216446|ref|YP_007174436.1|	-	0.014	15.4	0.0	0.059	13.3	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
SNF2_N	PF00176.18	gi|429216446|ref|YP_007174436.1|	-	0.018	13.8	0.7	0.034	12.9	0.1	1.7	2	0	0	2	2	1	0	SNF2	family	N-terminal	domain
AAA_17	PF13207.1	gi|429216446|ref|YP_007174436.1|	-	0.021	15.6	0.0	0.096	13.5	0.0	2.3	2	0	0	2	2	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|429216446|ref|YP_007174436.1|	-	0.047	13.8	0.0	0.2	11.8	0.0	2.1	2	0	0	2	2	1	0	RNA	helicase
MobB	PF03205.9	gi|429216446|ref|YP_007174436.1|	-	0.053	13.2	0.0	0.15	11.8	0.0	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|429216446|ref|YP_007174436.1|	-	0.055	13.0	0.0	15	5.1	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
AAA_28	PF13521.1	gi|429216446|ref|YP_007174436.1|	-	0.055	13.4	0.0	0.15	12.0	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
DUF3782	PF12644.2	gi|429216446|ref|YP_007174436.1|	-	0.077	12.7	0.0	0.28	10.9	0.0	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
Mg_chelatase	PF01078.16	gi|429216446|ref|YP_007174436.1|	-	0.092	11.8	0.1	0.18	10.9	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Viral_helicase1	PF01443.13	gi|429216446|ref|YP_007174436.1|	-	0.096	12.1	0.0	0.3	10.5	0.0	1.9	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
SRP54	PF00448.17	gi|429216446|ref|YP_007174436.1|	-	0.1	12.0	0.0	0.23	10.8	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
UvrD-helicase	PF00580.16	gi|429216446|ref|YP_007174436.1|	-	0.13	11.4	2.1	0.27	10.4	0.0	2.4	2	1	1	3	3	3	0	UvrD/REP	helicase	N-terminal	domain
MMR_HSR1	PF01926.18	gi|429216446|ref|YP_007174436.1|	-	0.31	11.0	2.1	0.9	9.5	0.4	2.6	2	1	0	2	2	1	0	50S	ribosome-binding	GTPase
Cob_adeno_trans	PF01923.13	gi|429216447|ref|YP_007174437.1|	-	6.6e-44	149.5	0.0	7.5e-44	149.3	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
Aldedh	PF00171.17	gi|429216448|ref|YP_007174438.1|	-	4.3e-38	130.8	0.0	7.9e-38	129.9	0.0	1.3	1	1	0	1	1	1	1	Aldehyde	dehydrogenase	family
GGDN	PF05165.7	gi|429216448|ref|YP_007174438.1|	-	0.057	12.4	0.4	0.53	9.2	0.1	2.2	2	1	0	2	2	2	0	GGDN	family
PCNA_N	PF00705.13	gi|429216449|ref|YP_007174439.1|	-	1.5e-14	53.5	0.4	2.8e-12	46.2	0.0	2.1	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|429216449|ref|YP_007174439.1|	-	1.3e-10	41.2	0.3	1.1e-08	35.0	0.1	2.3	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|429216449|ref|YP_007174439.1|	-	7.7e-07	28.1	0.5	0.00014	20.7	0.1	2.1	2	0	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
UbiA	PF01040.13	gi|429216450|ref|YP_007174440.1|	-	1.6e-44	152.0	19.6	2.1e-44	151.6	13.6	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DVL	PF08137.7	gi|429216451|ref|YP_007174441.1|	-	0.14	11.6	0.6	0.34	10.3	0.4	1.7	1	0	0	1	1	1	0	DVL	family
MFS_1	PF07690.11	gi|429216452|ref|YP_007174442.1|	-	1.5e-12	46.9	37.7	6.1e-10	38.3	8.3	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216452|ref|YP_007174442.1|	-	2.3e-12	46.2	20.3	1.7e-10	40.0	1.1	2.5	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
TRI12	PF06609.8	gi|429216452|ref|YP_007174442.1|	-	0.0013	17.0	4.2	0.0013	17.0	2.9	2.0	1	1	1	2	2	2	1	Fungal	trichothecene	efflux	pump	(TRI12)
DHDPS	PF00701.17	gi|429216453|ref|YP_007174443.1|	-	5.3e-68	228.7	0.0	6e-68	228.5	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
DAGK_cat	PF00781.19	gi|429216453|ref|YP_007174443.1|	-	0.0082	15.5	0.0	0.017	14.5	0.0	1.6	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
Peptidase_M32	PF02074.10	gi|429216455|ref|YP_007174445.1|	-	1.2e-185	617.8	6.0	1.4e-185	617.6	4.1	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
Acyl-CoA_dh_1	PF00441.19	gi|429216456|ref|YP_007174446.1|	-	3e-45	153.9	0.1	4.9e-45	153.3	0.1	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|429216456|ref|YP_007174446.1|	-	2.3e-24	86.1	0.0	4.5e-24	85.1	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|429216456|ref|YP_007174446.1|	-	2.8e-22	77.9	0.2	6.2e-22	76.8	0.2	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|429216456|ref|YP_007174446.1|	-	2.1e-14	53.9	0.0	2e-13	50.7	0.0	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Antitoxin-MazE	PF04014.13	gi|429216457|ref|YP_007174447.1|	-	5.5e-09	35.5	0.1	1.9e-08	33.8	0.0	1.9	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
Radical_SAM	PF04055.16	gi|429216458|ref|YP_007174448.1|	-	7.8e-08	32.6	0.1	2.2e-06	27.9	0.1	2.3	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|429216458|ref|YP_007174448.1|	-	3.6e-07	30.2	0.0	7.4e-07	29.2	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|429216458|ref|YP_007174448.1|	-	2e-05	24.7	0.0	5.1e-05	23.4	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Methyltransf_11	PF08241.7	gi|429216460|ref|YP_007174450.1|	-	2.2e-15	56.8	0.0	3.3e-15	56.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|429216460|ref|YP_007174450.1|	-	3e-12	46.3	0.4	6e-12	45.4	0.2	1.5	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|429216460|ref|YP_007174450.1|	-	6.3e-09	35.7	0.0	8e-09	35.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|429216460|ref|YP_007174450.1|	-	7e-09	35.1	0.0	8.4e-09	34.8	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.7	gi|429216460|ref|YP_007174450.1|	-	1.6e-06	28.5	0.0	2.9e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|429216460|ref|YP_007174450.1|	-	1.7e-06	28.3	0.0	2.6e-06	27.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429216460|ref|YP_007174450.1|	-	2.2e-05	24.9	0.0	3.6e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|429216460|ref|YP_007174450.1|	-	0.0015	17.9	0.0	0.0086	15.4	0.0	1.9	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
FmrO	PF07091.6	gi|429216460|ref|YP_007174450.1|	-	0.013	14.5	0.0	0.015	14.2	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
CMAS	PF02353.15	gi|429216460|ref|YP_007174450.1|	-	0.094	11.7	0.0	0.11	11.5	0.0	1.3	1	1	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.9	gi|429216460|ref|YP_007174450.1|	-	0.11	11.8	0.0	0.19	11.0	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	small	domain
Carb_kinase	PF01256.12	gi|429216461|ref|YP_007174451.1|	-	1.8e-49	168.1	0.0	3.1e-49	167.4	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|429216461|ref|YP_007174451.1|	-	9.4e-40	135.9	0.1	1.6e-39	135.1	0.1	1.4	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
DUF4257	PF14074.1	gi|429216461|ref|YP_007174451.1|	-	0.0023	17.5	0.7	0.006	16.2	0.0	2.0	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF4257)
Phos_pyr_kin	PF08543.7	gi|429216461|ref|YP_007174451.1|	-	0.018	14.2	0.1	0.037	13.2	0.0	1.6	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
Ribosomal_S24e	PF01282.14	gi|429216462|ref|YP_007174452.1|	-	5.4e-18	64.5	0.1	7.1e-18	64.1	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
Ribosomal_S27	PF01599.14	gi|429216463|ref|YP_007174453.1|	-	3.3e-07	30.0	3.3	4.5e-07	29.5	2.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|429216463|ref|YP_007174453.1|	-	7.1e-05	22.5	1.6	7.8e-05	22.3	1.1	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|429216463|ref|YP_007174453.1|	-	0.0079	15.8	0.6	0.0083	15.7	0.4	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-FPG_IleRS	PF06827.9	gi|429216463|ref|YP_007174453.1|	-	0.012	15.2	0.1	0.021	14.4	0.1	1.5	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
RNA_POL_M_15KD	PF02150.11	gi|429216463|ref|YP_007174453.1|	-	0.024	14.3	2.4	0.045	13.4	1.7	1.4	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
FlhC	PF05280.6	gi|429216463|ref|YP_007174453.1|	-	0.031	13.7	0.3	0.032	13.7	0.2	1.1	1	0	0	1	1	1	0	Flagellar	transcriptional	activator	(FlhC)
SprT-like	PF10263.4	gi|429216463|ref|YP_007174453.1|	-	0.049	13.2	1.4	0.046	13.3	0.9	1.1	1	0	0	1	1	1	0	SprT-like	family
zf-ribbon_3	PF13248.1	gi|429216463|ref|YP_007174453.1|	-	0.064	12.4	1.7	0.2	10.8	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429216463|ref|YP_007174453.1|	-	0.065	12.7	2.4	0.62	9.6	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-tcix	PF14952.1	gi|429216463|ref|YP_007174453.1|	-	0.078	12.3	0.2	0.078	12.3	0.1	1.5	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
UPF0547	PF10571.4	gi|429216463|ref|YP_007174453.1|	-	0.079	12.6	0.1	0.079	12.6	0.1	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.2	gi|429216463|ref|YP_007174453.1|	-	0.08	12.7	1.8	0.13	12.1	1.2	1.3	1	1	0	1	1	1	0	Double	zinc	ribbon
RecR	PF02132.10	gi|429216463|ref|YP_007174453.1|	-	0.09	12.2	0.8	0.16	11.4	0.5	1.5	1	1	0	1	1	1	0	RecR	protein
DUF1272	PF06906.6	gi|429216463|ref|YP_007174453.1|	-	0.13	12.0	1.2	0.54	10.1	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
YhfH	PF14149.1	gi|429216463|ref|YP_007174453.1|	-	0.17	11.7	0.4	0.17	11.7	0.3	1.8	2	0	0	2	2	2	0	YhfH-like	protein
Zn-ribbon_8	PF09723.5	gi|429216463|ref|YP_007174453.1|	-	0.28	11.1	3.1	3.9	7.5	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|429216463|ref|YP_007174453.1|	-	0.84	9.3	3.8	3.7	7.2	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DUF2082	PF09855.4	gi|429216463|ref|YP_007174453.1|	-	2.3	8.1	7.1	7	6.5	1.4	2.3	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-ISL3	PF14690.1	gi|429216463|ref|YP_007174453.1|	-	2.6	8.1	6.8	1.2	9.1	0.7	2.3	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TF_Zn_Ribbon	PF08271.7	gi|429216463|ref|YP_007174453.1|	-	4.1	6.8	5.5	7.5	5.9	0.2	2.4	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-H2C2_2	PF13465.1	gi|429216463|ref|YP_007174453.1|	-	5.6	7.4	9.1	0.97	9.8	0.7	2.3	2	1	0	2	2	2	0	Zinc-finger	double	domain
Peptidase_M22	PF00814.20	gi|429216464|ref|YP_007174454.1|	-	2.5e-72	243.6	0.0	3.1e-72	243.3	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
UPF0075	PF03702.9	gi|429216464|ref|YP_007174454.1|	-	0.0027	16.6	0.1	0.01	14.8	0.0	1.7	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0075)
BcrAD_BadFG	PF01869.15	gi|429216464|ref|YP_007174454.1|	-	0.014	14.7	0.1	0.79	8.9	0.0	2.2	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
CmcH_NodU	PF02543.10	gi|429216464|ref|YP_007174454.1|	-	0.05	12.7	0.0	0.068	12.2	0.0	1.1	1	0	0	1	1	1	0	Carbamoyltransferase
CW_binding_2	PF04122.7	gi|429216464|ref|YP_007174454.1|	-	0.063	13.4	0.2	0.98	9.6	0.0	2.6	3	0	0	3	3	3	0	Putative	cell	wall	binding	repeat	2
CheX	PF13690.1	gi|429216464|ref|YP_007174454.1|	-	0.1	12.4	0.0	0.23	11.3	0.0	1.6	1	0	0	1	1	1	0	Chemotaxis	phosphatase	CheX
RIO1	PF01163.17	gi|429216465|ref|YP_007174455.1|	-	3.1e-09	36.4	0.1	5.2e-09	35.7	0.1	1.3	1	1	0	1	1	1	1	RIO1	family
Pkinase	PF00069.20	gi|429216465|ref|YP_007174455.1|	-	6.4e-09	35.3	0.3	8.4e-09	34.9	0.2	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|429216465|ref|YP_007174455.1|	-	2.2e-08	33.4	0.0	3.3e-08	32.9	0.0	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.18	gi|429216465|ref|YP_007174455.1|	-	2.3e-06	27.5	0.0	4.6e-05	23.2	0.0	2.0	1	1	0	2	2	2	1	Phosphotransferase	enzyme	family
Choline_kinase	PF01633.15	gi|429216465|ref|YP_007174455.1|	-	3.1e-05	23.6	1.4	0.012	15.1	0.3	2.6	1	1	2	3	3	3	2	Choline/ethanolamine	kinase
Kdo	PF06293.9	gi|429216465|ref|YP_007174455.1|	-	0.00024	20.2	0.2	0.00099	18.2	0.1	1.9	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
WaaY	PF06176.6	gi|429216465|ref|YP_007174455.1|	-	0.00067	18.9	1.9	0.00096	18.4	1.3	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Ham1p_like	PF01725.11	gi|429216466|ref|YP_007174456.1|	-	1.4e-51	174.5	0.2	1.6e-51	174.3	0.1	1.0	1	0	0	1	1	1	1	Ham1	family
IMD	PF08397.6	gi|429216467|ref|YP_007174457.1|	-	0.089	12.0	0.0	0.1	11.9	0.0	1.0	1	0	0	1	1	1	0	IRSp53/MIM	homology	domain
POR	PF01558.13	gi|429216468|ref|YP_007174458.1|	-	3e-30	105.4	0.0	3.5e-30	105.1	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
SpoU_sub_bind	PF08032.7	gi|429216468|ref|YP_007174458.1|	-	0.025	14.7	0.1	0.071	13.2	0.0	1.7	2	0	0	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
IstB_IS21	PF01695.12	gi|429216468|ref|YP_007174458.1|	-	0.028	13.8	0.1	0.051	12.9	0.1	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
TPP_enzyme_C	PF02775.16	gi|429216469|ref|YP_007174459.1|	-	1.7e-25	89.4	0.0	3.8e-25	88.2	0.0	1.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|429216469|ref|YP_007174459.1|	-	1.1e-13	51.1	0.0	2.4e-13	50.1	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.22	gi|429216469|ref|YP_007174459.1|	-	6.5e-09	35.0	17.3	7.2e-08	31.7	2.3	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|429216469|ref|YP_007174459.1|	-	1.9e-06	28.1	10.2	5.1e-06	26.7	7.0	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429216469|ref|YP_007174459.1|	-	2.3e-06	27.1	17.9	1.5e-05	24.6	1.2	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|429216469|ref|YP_007174459.1|	-	4.8e-06	26.1	12.1	0.0036	17.1	2.0	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429216469|ref|YP_007174459.1|	-	3.9e-05	23.3	11.7	0.00015	21.5	8.2	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|429216469|ref|YP_007174459.1|	-	3.9e-05	23.4	11.1	0.00011	21.9	6.8	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429216469|ref|YP_007174459.1|	-	4.1e-05	23.7	10.6	0.00013	22.1	7.3	2.0	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|429216469|ref|YP_007174459.1|	-	0.00023	21.0	9.4	0.00056	19.8	6.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
TPP_enzyme_N	PF02776.13	gi|429216469|ref|YP_007174459.1|	-	0.00024	20.6	0.3	0.28	10.6	0.1	2.2	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_16	PF13484.1	gi|429216469|ref|YP_007174459.1|	-	0.00098	19.8	8.2	0.0044	17.7	0.7	2.7	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Transketolase_C	PF02780.15	gi|429216469|ref|YP_007174459.1|	-	0.013	15.3	0.0	0.034	14.0	0.0	1.7	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
Fer4_4	PF12800.2	gi|429216469|ref|YP_007174459.1|	-	0.015	15.5	3.7	0.015	15.5	2.5	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|429216469|ref|YP_007174459.1|	-	0.034	14.5	5.4	0.3	11.5	0.7	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429216469|ref|YP_007174459.1|	-	0.12	12.7	12.5	0.095	13.0	1.6	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|429216469|ref|YP_007174459.1|	-	0.21	12.1	14.6	0.056	14.0	1.7	2.9	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|429216469|ref|YP_007174459.1|	-	0.79	10.1	18.1	0.46	10.9	2.3	2.9	2	1	1	3	3	2	0	4Fe-4S	single	cluster	domain
Metallophos_2	PF12850.2	gi|429216470|ref|YP_007174460.1|	-	1e-28	100.1	0.0	1.3e-28	99.8	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|429216470|ref|YP_007174460.1|	-	1.8e-11	43.8	1.9	5.9e-11	42.1	1.3	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
DegQ	PF08181.6	gi|429216470|ref|YP_007174460.1|	-	0.11	12.2	1.1	0.94	9.2	0.1	2.2	2	0	0	2	2	2	0	DegQ	(SacQ)	family
Prok-JAB	PF14464.1	gi|429216471|ref|YP_007174461.1|	-	7.8e-11	41.4	0.0	9.8e-11	41.1	0.0	1.1	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
JAB	PF01398.16	gi|429216471|ref|YP_007174461.1|	-	4.4e-09	36.0	0.0	5.7e-09	35.7	0.0	1.1	1	0	0	1	1	1	1	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
RadC	PF04002.10	gi|429216471|ref|YP_007174461.1|	-	0.15	11.7	0.0	0.19	11.3	0.0	1.2	1	0	0	1	1	1	0	RadC-like	JAB	domain
GLF	PF03275.8	gi|429216472|ref|YP_007174462.1|	-	0.042	13.3	1.2	0.053	13.0	0.4	1.5	2	0	0	2	2	2	0	UDP-galactopyranose	mutase
Peptidase_M50	PF02163.17	gi|429216473|ref|YP_007174463.1|	-	1e-15	57.1	10.0	1e-15	57.1	6.9	2.5	2	2	0	2	2	2	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|429216473|ref|YP_007174463.1|	-	0.00018	21.3	0.0	0.00074	19.3	0.0	2.1	3	0	0	3	3	3	1	PDZ	domain
PDZ	PF00595.19	gi|429216473|ref|YP_007174463.1|	-	0.041	14.0	0.0	0.092	12.9	0.0	1.6	1	0	0	1	1	1	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
AdoHcyase	PF05221.12	gi|429216474|ref|YP_007174464.1|	-	7.1e-65	218.6	0.3	8e-65	218.4	0.2	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|429216474|ref|YP_007174464.1|	-	2.9e-59	199.5	1.7	2.9e-59	199.5	1.2	2.0	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.7	gi|429216474|ref|YP_007174464.1|	-	3.5e-09	36.2	0.2	6.2e-09	35.4	0.1	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
2-Hacid_dh_C	PF02826.14	gi|429216474|ref|YP_007174464.1|	-	3e-08	33.0	0.6	6.4e-08	31.9	0.4	1.6	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
THF_DHG_CYH_C	PF02882.14	gi|429216474|ref|YP_007174464.1|	-	0.0012	17.9	1.3	0.0097	14.9	0.9	2.2	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Imm35	PF15581.1	gi|429216474|ref|YP_007174464.1|	-	0.014	15.3	0.0	0.15	12.0	0.0	2.5	2	0	0	2	2	2	0	Immunity	protein	35
TrkA_N	PF02254.13	gi|429216474|ref|YP_007174464.1|	-	0.016	15.1	0.1	0.039	13.9	0.1	1.8	1	0	0	1	1	1	0	TrkA-N	domain
Mrr_cat	PF04471.7	gi|429216475|ref|YP_007174465.1|	-	0.0037	17.0	0.1	0.0071	16.1	0.1	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
UPF0102	PF02021.12	gi|429216475|ref|YP_007174465.1|	-	0.014	15.2	0.1	0.022	14.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
Plant_NMP1	PF06694.6	gi|429216475|ref|YP_007174465.1|	-	0.015	14.2	0.6	0.019	13.8	0.4	1.2	1	0	0	1	1	1	0	Plant	nuclear	matrix	protein	1	(NMP1)
RE_EcoO109I	PF14511.1	gi|429216475|ref|YP_007174465.1|	-	0.047	13.0	0.1	0.1	11.9	0.0	1.6	2	0	0	2	2	2	0	Type	II	restriction	endonuclease	EcoO109I
Hjc	PF01870.13	gi|429216475|ref|YP_007174465.1|	-	0.069	12.7	0.8	0.29	10.7	0.5	2.2	1	1	0	1	1	1	0	Archaeal	holliday	junction	resolvase	(hjc)
Ras	PF00071.17	gi|429216475|ref|YP_007174465.1|	-	0.076	12.3	0.9	0.49	9.7	0.2	2.4	2	1	0	2	2	2	0	Ras	family
DUF211	PF02680.9	gi|429216476|ref|YP_007174466.1|	-	1.7e-30	104.6	3.0	2e-30	104.4	2.1	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
Chlam_vir	PF05475.6	gi|429216476|ref|YP_007174466.1|	-	0.098	11.7	3.1	0.1	11.6	2.1	1.0	1	0	0	1	1	1	0	Chlamydia	virulence	protein	PGP3-D
Cache_1	PF02743.13	gi|429216476|ref|YP_007174466.1|	-	0.16	11.5	0.6	0.26	10.8	0.3	1.5	1	1	0	1	1	1	0	Cache	domain
TIP49	PF06068.8	gi|429216478|ref|YP_007174468.1|	-	2.8e-150	500.4	1.8	3.4e-150	500.2	1.2	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|429216478|ref|YP_007174468.1|	-	1.6e-12	47.7	1.2	1.1e-08	35.3	0.0	2.8	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|429216478|ref|YP_007174468.1|	-	5.6e-08	32.1	3.3	0.00031	19.8	0.0	3.3	3	1	0	3	3	3	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|429216478|ref|YP_007174468.1|	-	2.6e-06	27.5	1.3	0.034	14.2	0.0	3.0	4	0	0	4	4	3	2	AAA	domain
AAA_16	PF13191.1	gi|429216478|ref|YP_007174468.1|	-	3e-06	27.3	0.0	7.5e-05	22.7	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|429216478|ref|YP_007174468.1|	-	3.8e-05	24.5	0.0	9.5e-05	23.2	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.21	gi|429216478|ref|YP_007174468.1|	-	0.00035	20.0	0.1	0.0041	16.6	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|429216478|ref|YP_007174468.1|	-	0.0004	19.6	0.1	0.0036	16.5	0.0	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|429216478|ref|YP_007174468.1|	-	0.0012	18.3	0.1	0.0028	17.0	0.1	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|429216478|ref|YP_007174468.1|	-	0.0014	18.9	0.0	0.0034	17.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_2	PF07724.9	gi|429216478|ref|YP_007174468.1|	-	0.0016	18.4	0.0	0.0053	16.6	0.0	1.9	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_25	PF13481.1	gi|429216478|ref|YP_007174468.1|	-	0.0017	17.8	0.0	0.0037	16.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|429216478|ref|YP_007174468.1|	-	0.0017	18.2	0.0	0.0054	16.6	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
DNA_pol3_delta2	PF13177.1	gi|429216478|ref|YP_007174468.1|	-	0.0021	17.7	0.0	0.19	11.3	0.0	2.3	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
ResIII	PF04851.10	gi|429216478|ref|YP_007174468.1|	-	0.0032	17.3	0.1	0.023	14.5	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Arch_ATPase	PF01637.13	gi|429216478|ref|YP_007174468.1|	-	0.0043	16.7	0.2	0.23	11.1	0.2	2.4	1	1	0	1	1	1	1	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|429216478|ref|YP_007174468.1|	-	0.0044	16.1	0.0	0.0095	15.0	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
RNA_helicase	PF00910.17	gi|429216478|ref|YP_007174468.1|	-	0.0055	16.8	0.0	0.014	15.5	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
PhoH	PF02562.11	gi|429216478|ref|YP_007174468.1|	-	0.007	15.6	0.1	0.014	14.6	0.0	1.5	1	0	0	1	1	1	1	PhoH-like	protein
AAA_19	PF13245.1	gi|429216478|ref|YP_007174468.1|	-	0.01	15.5	0.1	0.025	14.3	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_14	PF13173.1	gi|429216478|ref|YP_007174468.1|	-	0.014	15.3	0.2	0.86	9.5	0.0	2.9	3	0	0	3	3	2	0	AAA	domain
T2SE	PF00437.15	gi|429216478|ref|YP_007174468.1|	-	0.031	13.2	0.0	0.056	12.3	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_5	PF07728.9	gi|429216478|ref|YP_007174468.1|	-	0.037	13.7	0.1	0.22	11.2	0.0	2.3	3	0	0	3	3	2	0	AAA	domain	(dynein-related	subfamily)
DUF2075	PF09848.4	gi|429216478|ref|YP_007174468.1|	-	0.041	12.8	0.1	0.2	10.5	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_30	PF13604.1	gi|429216478|ref|YP_007174468.1|	-	0.045	13.3	0.5	3.9	6.9	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|429216478|ref|YP_007174468.1|	-	0.087	12.7	0.2	0.21	11.5	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
ABC_tran	PF00005.22	gi|429216478|ref|YP_007174468.1|	-	0.1	12.9	0.1	0.26	11.6	0.0	1.9	1	1	0	1	1	1	0	ABC	transporter
NACHT	PF05729.7	gi|429216478|ref|YP_007174468.1|	-	0.1	12.2	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_31	PF13614.1	gi|429216478|ref|YP_007174468.1|	-	0.12	12.2	0.1	17	5.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Parvo_NS1	PF01057.12	gi|429216478|ref|YP_007174468.1|	-	0.14	11.0	0.0	1.3	7.8	0.0	2.1	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
EamA	PF00892.15	gi|429216479|ref|YP_007174469.1|	-	2.5e-30	105.0	38.4	1.1e-15	57.7	9.7	2.3	2	0	0	2	2	2	2	EamA-like	transporter	family
RseC_MucC	PF04246.7	gi|429216479|ref|YP_007174469.1|	-	0.0055	16.2	18.0	0.0088	15.6	0.7	3.4	2	1	1	3	3	3	2	Positive	regulator	of	sigma(E),	RseC/MucC
EmrE	PF13536.1	gi|429216479|ref|YP_007174469.1|	-	0.028	14.6	31.0	0.2	11.8	5.4	3.6	2	2	1	3	3	3	0	Multidrug	resistance	efflux	transporter
TPT	PF03151.11	gi|429216479|ref|YP_007174469.1|	-	0.41	10.2	20.6	0.08	12.5	4.1	4.2	2	2	0	2	2	2	0	Triose-phosphate	Transporter	family
DUF2244	PF10003.4	gi|429216479|ref|YP_007174469.1|	-	7.5	5.9	6.4	0.79	9.0	0.0	2.4	2	1	1	3	3	3	0	Integral	membrane	protein	(DUF2244)
PsiE	PF06146.7	gi|429216481|ref|YP_007174471.1|	-	4.5e-09	36.4	5.4	4.5e-09	36.4	3.8	1.9	2	0	0	2	2	2	1	Phosphate-starvation-inducible	E
UPF0147	PF03685.8	gi|429216483|ref|YP_007174473.1|	-	1.7e-35	120.7	0.7	1.9e-35	120.5	0.5	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|429216483|ref|YP_007174473.1|	-	0.00076	19.5	0.4	0.089	12.9	0.2	2.1	1	1	0	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
HEAT_2	PF13646.1	gi|429216483|ref|YP_007174473.1|	-	0.098	12.9	0.2	0.16	12.2	0.1	1.5	1	1	0	1	1	1	0	HEAT	repeats
Toxin_46	PF15526.1	gi|429216484|ref|YP_007174474.1|	-	0.29	11.3	4.3	0.15	12.2	0.5	2.2	2	1	0	2	2	2	0	Putative	toxin	46
AMP-binding	PF00501.23	gi|429216485|ref|YP_007174475.1|	-	5.1e-82	275.4	0.0	6.2e-82	275.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216485|ref|YP_007174475.1|	-	8.6e-10	39.4	0.0	1.7e-09	38.4	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Malic_M	PF03949.10	gi|429216486|ref|YP_007174476.1|	-	2.2e-63	214.1	2.2	2.8e-63	213.8	1.5	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|429216486|ref|YP_007174476.1|	-	3.1e-21	75.7	0.0	1.9e-17	63.4	0.0	2.8	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
PNP_UDP_1	PF01048.15	gi|429216486|ref|YP_007174476.1|	-	0.0063	15.5	0.0	0.011	14.7	0.0	1.3	1	0	0	1	1	1	1	Phosphorylase	superfamily
Acetyltransf_4	PF13420.1	gi|429216487|ref|YP_007174477.1|	-	1.5e-12	47.7	0.3	1.8e-12	47.4	0.2	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|429216487|ref|YP_007174477.1|	-	6e-12	45.1	0.0	1.4e-11	44.0	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_1	PF00583.19	gi|429216487|ref|YP_007174477.1|	-	7.7e-11	41.8	0.0	1.3e-10	41.1	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|429216487|ref|YP_007174477.1|	-	4.3e-10	39.7	0.0	5e-10	39.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|429216487|ref|YP_007174477.1|	-	2e-08	34.2	0.0	3.3e-08	33.5	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|429216487|ref|YP_007174477.1|	-	5.6e-05	22.9	0.0	9.6e-05	22.2	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|429216487|ref|YP_007174477.1|	-	0.00013	21.8	0.0	0.00043	20.1	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|429216487|ref|YP_007174477.1|	-	0.0014	18.4	0.0	0.0022	17.8	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.1	gi|429216487|ref|YP_007174477.1|	-	0.0056	16.8	0.0	0.0067	16.6	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_13	PF13880.1	gi|429216487|ref|YP_007174477.1|	-	0.046	13.4	0.0	0.11	12.2	0.0	1.6	2	0	0	2	2	2	0	ESCO1/2	acetyl-transferase
Acetyltransf_1	PF00583.19	gi|429216488|ref|YP_007174478.1|	-	7.1e-11	41.9	0.0	9.7e-11	41.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|429216488|ref|YP_007174478.1|	-	2.2e-08	34.1	0.1	3e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|429216488|ref|YP_007174478.1|	-	1.9e-07	31.1	0.5	2.3e-07	30.9	0.4	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|429216488|ref|YP_007174478.1|	-	1.7e-06	28.1	0.0	2e-06	27.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|429216488|ref|YP_007174478.1|	-	0.00014	21.6	0.0	0.00023	21.0	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|429216488|ref|YP_007174478.1|	-	0.007	16.1	0.1	0.016	14.9	0.0	1.6	2	0	0	2	2	2	1	FR47-like	protein
Acetyltransf_CG	PF14542.1	gi|429216488|ref|YP_007174478.1|	-	0.011	15.5	0.0	0.021	14.6	0.0	1.5	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
AstA	PF04958.7	gi|429216488|ref|YP_007174478.1|	-	0.022	13.2	0.0	0.071	11.5	0.0	1.6	2	0	0	2	2	2	0	Arginine	N-succinyltransferase	beta	subunit
DUF4468	PF14730.1	gi|429216488|ref|YP_007174478.1|	-	0.064	12.9	0.2	0.14	11.8	0.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
DUF1313	PF07011.6	gi|429216488|ref|YP_007174478.1|	-	0.15	11.7	5.4	0.24	11.0	3.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1313)
FAD-oxidase_C	PF02913.14	gi|429216489|ref|YP_007174479.1|	-	6.9e-51	172.9	0.0	8.7e-51	172.6	0.0	1.1	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|429216489|ref|YP_007174479.1|	-	1.6e-36	124.8	0.0	1.2e-35	122.0	0.0	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Fer4_8	PF13183.1	gi|429216490|ref|YP_007174480.1|	-	4e-12	45.9	2.8	5.5e-12	45.5	1.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|429216490|ref|YP_007174480.1|	-	3e-11	42.9	9.7	3.6e-09	36.2	2.1	1.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429216490|ref|YP_007174480.1|	-	6.1e-10	39.3	2.4	9.9e-10	38.6	1.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429216490|ref|YP_007174480.1|	-	1e-07	32.0	3.8	0.0044	17.2	0.5	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|429216490|ref|YP_007174480.1|	-	2.1e-07	31.2	4.4	0.0073	16.7	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429216490|ref|YP_007174480.1|	-	2.2e-07	30.4	12.2	0.0019	18.0	1.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|429216490|ref|YP_007174480.1|	-	3e-07	29.9	9.6	0.00065	19.4	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|429216490|ref|YP_007174480.1|	-	4.2e-07	29.2	14.7	9.4e-05	21.8	2.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|429216490|ref|YP_007174480.1|	-	1.7e-06	27.8	9.7	0.0034	17.6	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|429216490|ref|YP_007174480.1|	-	3.2e-06	27.4	20.7	2e-05	24.8	6.2	1.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|429216490|ref|YP_007174480.1|	-	3.1e-05	23.7	6.6	0.025	14.4	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|429216490|ref|YP_007174480.1|	-	7.7e-05	23.3	5.6	0.00027	21.6	4.1	1.8	1	1	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|429216490|ref|YP_007174480.1|	-	0.013	15.9	15.4	0.25	11.9	2.5	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|429216490|ref|YP_007174480.1|	-	0.052	14.1	2.3	1	9.9	0.1	2.2	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|429216490|ref|YP_007174480.1|	-	0.55	10.6	10.5	2.2	8.7	1.3	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
CCG	PF02754.11	gi|429216491|ref|YP_007174481.1|	-	4.2e-11	42.7	0.0	2.2e-09	37.1	0.0	2.3	2	0	0	2	2	2	2	Cysteine-rich	domain
zf-ribbon_3	PF13248.1	gi|429216492|ref|YP_007174482.1|	-	1.1e-05	24.4	5.0	0.0047	16.0	0.1	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
UPF0547	PF10571.4	gi|429216492|ref|YP_007174482.1|	-	2.2e-05	24.0	6.6	0.00026	20.5	4.5	2.1	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zinc_ribbon_5	PF13719.1	gi|429216492|ref|YP_007174482.1|	-	2.8e-05	23.6	3.2	0.015	14.8	0.1	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
Elf1	PF05129.8	gi|429216492|ref|YP_007174482.1|	-	5.9e-05	22.6	0.1	0.12	12.0	0.0	2.2	2	0	0	2	2	2	2	Transcription	elongation	factor	Elf1	like
zinc_ribbon_4	PF13717.1	gi|429216492|ref|YP_007174482.1|	-	0.0001	21.9	3.8	0.032	13.9	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|429216492|ref|YP_007174482.1|	-	0.00018	21.2	0.5	0.46	10.3	0.0	2.1	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429216492|ref|YP_007174482.1|	-	0.0002	20.7	6.7	0.03	13.8	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
DUF1610	PF07754.6	gi|429216492|ref|YP_007174482.1|	-	0.00031	20.7	9.8	0.076	13.1	1.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
Cren7	PF11520.3	gi|429216492|ref|YP_007174482.1|	-	0.00031	20.2	0.5	0.00057	19.4	0.3	1.5	1	1	0	1	1	1	1	Chromatin	protein	Cren7
DUF4379	PF14311.1	gi|429216492|ref|YP_007174482.1|	-	0.00038	20.2	1.8	0.00085	19.0	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4379)
TF_Zn_Ribbon	PF08271.7	gi|429216492|ref|YP_007174482.1|	-	0.00039	19.6	3.5	0.28	10.5	0.2	2.5	2	0	0	2	2	2	2	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.6	gi|429216492|ref|YP_007174482.1|	-	0.00039	20.0	0.2	0.97	9.1	0.0	2.2	2	0	0	2	2	2	2	Putative	transposase	DNA-binding	domain
zf-ISL3	PF14690.1	gi|429216492|ref|YP_007174482.1|	-	0.00069	19.5	1.0	0.3	11.1	0.0	2.2	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn-ribbon_8	PF09723.5	gi|429216492|ref|YP_007174482.1|	-	0.0012	18.7	1.6	0.64	10.0	0.2	2.4	2	0	0	2	2	2	1	Zinc	ribbon	domain
FYDLN_acid	PF09538.5	gi|429216492|ref|YP_007174482.1|	-	0.0013	19.2	1.7	1.2	9.8	0.1	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(FYDLN_acid)
Sgf11	PF08209.6	gi|429216492|ref|YP_007174482.1|	-	0.0017	17.6	1.3	0.64	9.3	0.1	2.2	2	0	0	2	2	2	1	Sgf11	(transcriptional	regulation	protein)
zf-3CxxC	PF13695.1	gi|429216492|ref|YP_007174482.1|	-	0.002	18.2	0.2	0.019	15.1	0.1	2.1	2	0	0	2	2	2	1	Zinc-binding	domain
DNA_RNApol_7kD	PF03604.8	gi|429216492|ref|YP_007174482.1|	-	0.0027	17.1	1.1	1.2	8.6	0.1	2.3	2	0	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-IS66	PF13005.2	gi|429216492|ref|YP_007174482.1|	-	0.003	17.4	1.5	0.026	14.4	1.6	2.0	1	1	1	2	2	2	1	zinc-finger	binding	domain	of	transposase	IS66
DZR	PF12773.2	gi|429216492|ref|YP_007174482.1|	-	0.0035	17.1	2.5	0.021	14.6	1.7	2.0	1	1	0	1	1	1	1	Double	zinc	ribbon
CpXC	PF14353.1	gi|429216492|ref|YP_007174482.1|	-	0.0038	17.1	0.4	0.007	16.3	0.2	1.5	1	1	0	1	1	1	1	CpXC	protein
zf-H2C2_2	PF13465.1	gi|429216492|ref|YP_007174482.1|	-	0.0045	17.2	4.1	0.31	11.3	0.9	2.3	2	0	0	2	2	2	1	Zinc-finger	double	domain
Cys_rich_CPXG	PF14255.1	gi|429216492|ref|YP_007174482.1|	-	0.0051	16.6	2.1	0.42	10.4	0.0	2.8	3	0	0	3	3	3	1	Cysteine-rich	CPXCG
Rubredoxin	PF00301.15	gi|429216492|ref|YP_007174482.1|	-	0.0056	16.5	3.3	0.57	10.0	0.4	2.6	2	0	0	2	2	2	1	Rubredoxin
zf-Mss51	PF13824.1	gi|429216492|ref|YP_007174482.1|	-	0.0062	16.3	0.2	3.9	7.4	0.0	2.3	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
TFIIS_C	PF01096.13	gi|429216492|ref|YP_007174482.1|	-	0.017	14.7	4.4	0.19	11.3	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-HIT	PF04438.11	gi|429216492|ref|YP_007174482.1|	-	0.018	14.6	1.0	2.6	7.7	0.1	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
Nudix_N_2	PF14803.1	gi|429216492|ref|YP_007174482.1|	-	0.02	14.5	1.1	5.7	6.7	0.1	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
Rep_fac-A_C	PF08646.5	gi|429216492|ref|YP_007174482.1|	-	0.024	14.3	0.3	0.44	10.2	0.0	2.0	1	1	1	2	2	2	0	Replication	factor-A	C	terminal	domain
DUF2296	PF10058.4	gi|429216492|ref|YP_007174482.1|	-	0.026	14.2	0.7	4.4	7.1	0.1	2.3	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DNA_ligase_ZBD	PF03119.11	gi|429216492|ref|YP_007174482.1|	-	0.035	13.7	5.5	0.16	11.6	0.1	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ZPR1	PF03367.8	gi|429216492|ref|YP_007174482.1|	-	0.037	13.2	0.6	0.055	12.6	0.4	1.4	1	1	0	1	1	1	0	ZPR1	zinc-finger	domain
HypA	PF01155.14	gi|429216492|ref|YP_007174482.1|	-	0.041	13.5	0.1	0.076	12.7	0.1	1.5	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
RNHCP	PF12647.2	gi|429216492|ref|YP_007174482.1|	-	0.042	13.6	0.2	3.3	7.6	0.0	2.2	2	0	0	2	2	2	0	RNHCP	domain
DUF2318	PF10080.4	gi|429216492|ref|YP_007174482.1|	-	0.048	13.4	0.2	0.91	9.3	0.0	2.0	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2318)
DUF329	PF03884.9	gi|429216492|ref|YP_007174482.1|	-	0.051	13.1	2.2	3.9	7.1	0.2	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
zf-AN1	PF01428.11	gi|429216492|ref|YP_007174482.1|	-	0.058	13.2	1.2	6.4	6.7	0.2	2.2	2	0	0	2	2	2	0	AN1-like	Zinc	finger
zf-RING_3	PF14369.1	gi|429216492|ref|YP_007174482.1|	-	0.06	13.3	1.1	6.2	6.9	0.1	2.3	2	0	0	2	2	2	0	zinc-finger
TerY-C	PF15616.1	gi|429216492|ref|YP_007174482.1|	-	0.068	13.0	0.9	8.4	6.3	0.0	2.1	2	0	0	2	2	2	0	TerY-C	metal	binding	domain
Ribosomal_L44	PF00935.14	gi|429216492|ref|YP_007174482.1|	-	0.085	12.8	1.0	9.7	6.2	0.0	2.1	1	1	1	2	2	2	0	Ribosomal	protein	L44
zf-Di19	PF05605.7	gi|429216492|ref|YP_007174482.1|	-	0.094	12.8	2.1	10	6.3	0.3	2.2	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
T4_baseplate	PF12322.3	gi|429216492|ref|YP_007174482.1|	-	0.095	11.9	0.6	7.5	5.7	0.0	2.2	2	0	0	2	2	2	0	T4	bacteriophage	base	plate	protein
zf-FPG_IleRS	PF06827.9	gi|429216492|ref|YP_007174482.1|	-	0.096	12.3	1.7	10	5.8	0.1	2.5	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
PhnA_Zn_Ribbon	PF08274.7	gi|429216492|ref|YP_007174482.1|	-	0.099	12.4	2.6	1.5	8.7	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.6	gi|429216492|ref|YP_007174482.1|	-	0.1	12.1	3.0	5.6	6.5	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|429216492|ref|YP_007174482.1|	-	0.1	12.9	3.0	6.5	7.3	0.3	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Peptidase_S24	PF00717.18	gi|429216492|ref|YP_007174482.1|	-	0.12	12.0	0.0	0.22	11.1	0.0	1.4	2	0	0	2	2	1	0	Peptidase	S24-like
Ogr_Delta	PF04606.7	gi|429216492|ref|YP_007174482.1|	-	0.13	11.9	3.5	3.5	7.3	0.1	2.2	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zf-nanos	PF05741.8	gi|429216492|ref|YP_007174482.1|	-	0.19	11.7	1.5	1.2	9.1	0.0	2.1	1	1	1	2	2	2	0	Nanos	RNA	binding	domain
DUF164	PF02591.10	gi|429216492|ref|YP_007174482.1|	-	0.2	11.4	1.0	8.6	6.2	0.1	2.3	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
ADK_lid	PF05191.9	gi|429216492|ref|YP_007174482.1|	-	0.21	11.3	2.6	11	5.7	0.1	2.4	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
UPF0515	PF15135.1	gi|429216492|ref|YP_007174482.1|	-	0.22	10.5	1.1	0.38	9.7	0.8	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	UPF0515
zf-C4_Topoisom	PF01396.14	gi|429216492|ref|YP_007174482.1|	-	0.28	10.7	3.3	6.2	6.4	0.1	2.3	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Prim_Zn_Ribbon	PF08273.7	gi|429216492|ref|YP_007174482.1|	-	0.39	10.8	3.7	10	6.2	0.2	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-tcix	PF14952.1	gi|429216492|ref|YP_007174482.1|	-	1.4	8.2	5.7	10	5.5	0.1	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-HYPF	PF07503.7	gi|429216492|ref|YP_007174482.1|	-	1.6	8.1	4.8	3.8	7.0	0.3	2.2	2	0	0	2	2	2	0	HypF	finger
zf-TFIIB	PF13453.1	gi|429216492|ref|YP_007174482.1|	-	3	7.1	6.6	6.1	6.1	0.2	2.7	2	1	1	3	3	3	0	Transcription	factor	zinc-finger
Glycos_transf_2	PF00535.21	gi|429216493|ref|YP_007174483.1|	-	1.2e-19	70.5	0.0	1.6e-19	70.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.1	gi|429216493|ref|YP_007174483.1|	-	0.0012	19.1	0.0	0.0021	18.3	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429216493|ref|YP_007174483.1|	-	0.017	14.9	0.0	0.024	14.4	0.0	1.2	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
DUF2274	PF10038.4	gi|429216493|ref|YP_007174483.1|	-	0.097	12.8	0.0	0.2	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2274)
Enolase_C	PF00113.17	gi|429216495|ref|YP_007174485.1|	-	3.1e-113	377.6	0.1	4.5e-113	377.1	0.0	1.2	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|429216495|ref|YP_007174485.1|	-	8.2e-43	145.4	0.8	1.6e-42	144.5	0.5	1.5	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
AMP-binding	PF00501.23	gi|429216496|ref|YP_007174486.1|	-	3.3e-82	276.1	0.0	4.3e-82	275.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216496|ref|YP_007174486.1|	-	1.6e-17	64.2	0.3	3.4e-17	63.1	0.2	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF1310	PF07006.6	gi|429216496|ref|YP_007174486.1|	-	0.034	13.6	0.8	0.096	12.2	0.6	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1310)
DUF4345	PF14248.1	gi|429216497|ref|YP_007174487.1|	-	0.036	13.4	2.0	0.055	12.9	1.3	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4345)
YtpI	PF14007.1	gi|429216497|ref|YP_007174487.1|	-	0.36	10.7	10.8	0.43	10.5	7.5	1.1	1	0	0	1	1	1	0	YtpI-like	protein
DUF1129	PF06570.6	gi|429216497|ref|YP_007174487.1|	-	0.66	9.2	5.1	0.81	8.9	3.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
CbiQ	PF02361.11	gi|429216497|ref|YP_007174487.1|	-	6.6	6.2	12.7	47	3.4	8.8	1.9	1	1	0	1	1	1	0	Cobalt	transport	protein
HTH_5	PF01022.15	gi|429216498|ref|YP_007174488.1|	-	3.7e-10	39.3	0.2	5.2e-10	38.8	0.2	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|429216498|ref|YP_007174488.1|	-	3.8e-06	26.1	0.7	5.6e-06	25.6	0.5	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|429216498|ref|YP_007174488.1|	-	1.7e-05	24.3	0.0	2.8e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_20	PF12840.2	gi|429216498|ref|YP_007174488.1|	-	1.7e-05	24.5	0.0	2e-05	24.2	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|429216498|ref|YP_007174488.1|	-	2.4e-05	23.9	0.0	3.3e-05	23.5	0.0	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_9	PF08221.6	gi|429216498|ref|YP_007174488.1|	-	0.0025	17.6	0.2	0.0044	16.8	0.1	1.3	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_28	PF13518.1	gi|429216498|ref|YP_007174488.1|	-	0.0064	16.4	0.0	0.0092	15.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|429216498|ref|YP_007174488.1|	-	0.0087	15.8	0.0	0.0098	15.6	0.0	1.2	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|429216498|ref|YP_007174488.1|	-	0.0091	15.5	0.1	0.013	15.0	0.1	1.2	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_23	PF13384.1	gi|429216498|ref|YP_007174488.1|	-	0.011	15.3	0.0	0.015	14.9	0.0	1.2	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_45	PF14947.1	gi|429216498|ref|YP_007174488.1|	-	0.013	15.2	0.4	0.018	14.8	0.3	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix
TFIIE_alpha	PF02002.12	gi|429216498|ref|YP_007174488.1|	-	0.015	14.7	0.1	0.023	14.2	0.1	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
MarR	PF01047.17	gi|429216498|ref|YP_007174488.1|	-	0.032	13.9	0.2	0.048	13.3	0.1	1.2	1	0	0	1	1	1	0	MarR	family
Rrf2	PF02082.15	gi|429216498|ref|YP_007174488.1|	-	0.038	14.0	0.0	0.051	13.6	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_29	PF13551.1	gi|429216498|ref|YP_007174488.1|	-	0.042	13.9	0.0	0.048	13.8	0.0	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
Replic_Relax	PF13814.1	gi|429216498|ref|YP_007174488.1|	-	0.052	13.3	0.0	0.059	13.2	0.0	1.0	1	0	0	1	1	1	0	Replication-relaxation
Penicillinase_R	PF03965.11	gi|429216498|ref|YP_007174488.1|	-	0.083	12.9	0.0	0.092	12.8	0.0	1.1	1	0	0	1	1	1	0	Penicillinase	repressor
DUF387	PF04079.11	gi|429216498|ref|YP_007174488.1|	-	0.13	11.6	0.0	0.13	11.6	0.0	1.1	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
IncA	PF04156.9	gi|429216499|ref|YP_007174489.1|	-	0.00041	20.0	0.6	0.00067	19.3	0.4	1.3	1	0	0	1	1	1	1	IncA	protein
Baculo_PEP_C	PF04513.7	gi|429216499|ref|YP_007174489.1|	-	0.002	17.9	2.8	0.0048	16.7	1.9	1.6	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
BLOC1_2	PF10046.4	gi|429216499|ref|YP_007174489.1|	-	0.0041	17.2	0.5	0.033	14.3	0.5	2.3	2	0	0	2	2	2	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SnoaL_2	PF12680.2	gi|429216499|ref|YP_007174489.1|	-	0.0067	16.8	0.0	3.8	7.9	0.0	2.3	2	0	0	2	2	2	1	SnoaL-like	domain
DUF4446	PF14584.1	gi|429216499|ref|YP_007174489.1|	-	0.0085	15.9	0.1	0.014	15.2	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
WXG100	PF06013.7	gi|429216499|ref|YP_007174489.1|	-	0.013	15.4	0.1	0.031	14.2	0.1	1.6	1	0	0	1	1	1	0	Proteins	of	100	residues	with	WXG
MscS_porin	PF12795.2	gi|429216499|ref|YP_007174489.1|	-	0.014	14.7	3.5	0.021	14.1	2.4	1.1	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
Reo_sigmaC	PF04582.7	gi|429216499|ref|YP_007174489.1|	-	0.027	13.6	2.9	0.039	13.1	2.0	1.1	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
TarH	PF02203.10	gi|429216499|ref|YP_007174489.1|	-	0.041	13.7	1.1	0.086	12.6	0.7	1.5	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
DUF948	PF06103.6	gi|429216499|ref|YP_007174489.1|	-	0.043	13.6	0.3	0.15	11.9	0.2	1.9	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF3627	PF12299.3	gi|429216499|ref|YP_007174489.1|	-	0.083	12.9	0.0	30	4.7	0.0	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3627)
Nuc_recep-AF1	PF11825.3	gi|429216499|ref|YP_007174489.1|	-	0.095	12.6	7.0	9.7	6.1	0.0	2.8	2	1	0	2	2	2	0	Nuclear/hormone	receptor	activator	site	AF-1
UPF0118	PF01594.11	gi|429216499|ref|YP_007174489.1|	-	0.11	11.4	3.3	0.21	10.5	2.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF20
DUF342	PF03961.8	gi|429216499|ref|YP_007174489.1|	-	0.2	10.0	0.1	0.27	9.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
FlaC_arch	PF05377.6	gi|429216499|ref|YP_007174489.1|	-	0.23	11.3	1.8	11	6.0	1.0	2.7	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
HALZ	PF02183.13	gi|429216499|ref|YP_007174489.1|	-	1.4	8.6	3.2	4.5	7.0	0.4	2.4	1	1	1	2	2	2	0	Homeobox	associated	leucine	zipper
Creatininase	PF02633.9	gi|429216500|ref|YP_007174490.1|	-	8.1e-57	192.0	0.0	9.6e-57	191.7	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
ABC_tran	PF00005.22	gi|429216501|ref|YP_007174491.1|	-	2.9e-29	102.1	0.3	6.1e-29	101.0	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|429216501|ref|YP_007174491.1|	-	7.1e-11	42.5	9.0	6.2e-10	39.5	2.1	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|429216501|ref|YP_007174491.1|	-	6.8e-08	31.9	9.5	0.00034	19.8	0.0	3.1	3	0	0	3	3	3	3	AAA	ATPase	domain
AAA_29	PF13555.1	gi|429216501|ref|YP_007174491.1|	-	0.00013	21.3	0.2	0.00026	20.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|429216501|ref|YP_007174491.1|	-	0.0087	16.3	10.8	0.041	14.1	7.5	1.9	1	1	0	1	1	1	1	AAA	domain
DUF4162	PF13732.1	gi|429216501|ref|YP_007174491.1|	-	0.024	15.1	2.8	0.024	15.1	2.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4162)
UPF0079	PF02367.12	gi|429216501|ref|YP_007174491.1|	-	0.04	13.5	0.2	0.12	12.0	0.1	1.8	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SbcCD_C	PF13558.1	gi|429216501|ref|YP_007174491.1|	-	0.049	13.5	0.0	0.36	10.7	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.1	gi|429216501|ref|YP_007174491.1|	-	0.1	12.1	0.0	0.21	11.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ABC2_membrane	PF01061.19	gi|429216502|ref|YP_007174492.1|	-	1e-20	73.8	32.8	1e-20	73.8	22.7	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|429216502|ref|YP_007174492.1|	-	1.1e-10	41.1	39.1	1.1e-10	41.1	27.1	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|429216502|ref|YP_007174492.1|	-	4.2e-05	22.5	31.7	0.0001	21.3	22.0	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|429216502|ref|YP_007174492.1|	-	0.0019	17.3	44.7	0.0025	17.0	31.0	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
DUF3488	PF11992.3	gi|429216502|ref|YP_007174492.1|	-	5.1	5.6	9.4	9.6	4.7	6.5	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3488)
MFS_1	PF07690.11	gi|429216503|ref|YP_007174493.1|	-	1.5e-17	63.3	47.8	1.5e-11	43.6	9.5	3.0	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216503|ref|YP_007174493.1|	-	4.7e-13	48.5	28.2	3e-12	45.8	19.5	2.2	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
DUF2499	PF10693.4	gi|429216503|ref|YP_007174493.1|	-	1.7	8.7	7.0	1	9.4	0.1	3.4	4	1	1	5	5	5	0	Protein	of	unknown	function	(DUF2499)
AFOR_C	PF01314.13	gi|429216504|ref|YP_007174494.1|	-	2.1e-123	411.7	0.0	2.8e-123	411.3	0.0	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|429216504|ref|YP_007174494.1|	-	1.2e-76	256.5	0.0	1.6e-76	256.1	0.0	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Urm1	PF09138.6	gi|429216505|ref|YP_007174495.1|	-	1.8e-06	27.9	0.9	2e-06	27.8	0.6	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
ThiS	PF02597.15	gi|429216505|ref|YP_007174495.1|	-	0.00035	20.9	0.0	0.00047	20.5	0.0	1.2	1	0	0	1	1	1	1	ThiS	family
EppA_BapA	PF07268.6	gi|429216505|ref|YP_007174495.1|	-	0.037	13.6	1.2	0.049	13.3	0.8	1.3	1	1	0	1	1	1	0	Exported	protein	precursor	(EppA/BapA)
Flagellin_IN	PF07196.8	gi|429216505|ref|YP_007174495.1|	-	0.061	13.3	1.1	0.093	12.7	0.1	1.7	2	0	0	2	2	2	0	Flagellin	hook	IN	motif
ThiS	PF02597.15	gi|429216506|ref|YP_007174496.1|	-	3.4e-12	46.6	0.0	3.7e-12	46.4	0.0	1.0	1	0	0	1	1	1	1	ThiS	family
Urm1	PF09138.6	gi|429216506|ref|YP_007174496.1|	-	0.0077	16.3	0.3	0.0085	16.1	0.2	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
MFS_1	PF07690.11	gi|429216507|ref|YP_007174497.1|	-	1.1e-27	96.6	36.4	2.4e-21	75.8	10.8	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|429216507|ref|YP_007174497.1|	-	2.7e-07	29.0	1.0	1.6e-06	26.5	0.1	2.0	2	0	0	2	2	2	1	Transmembrane	secretion	effector
UNC-93	PF05978.11	gi|429216507|ref|YP_007174497.1|	-	0.0074	15.7	7.1	0.0074	15.7	4.9	2.9	2	2	1	3	3	3	2	Ion	channel	regulatory	protein	UNC-93
Auto_anti-p27	PF06677.7	gi|429216508|ref|YP_007174498.1|	-	2.7e-17	62.2	1.2	5e-17	61.3	0.9	1.5	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
FYDLN_acid	PF09538.5	gi|429216508|ref|YP_007174498.1|	-	0.0034	17.9	0.2	0.0046	17.5	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(FYDLN_acid)
TF_Zn_Ribbon	PF08271.7	gi|429216508|ref|YP_007174498.1|	-	0.017	14.4	0.2	0.047	13.0	0.2	1.9	1	0	0	1	1	1	0	TFIIB	zinc-binding
Rieske	PF00355.21	gi|429216508|ref|YP_007174498.1|	-	0.031	13.8	0.0	0.048	13.2	0.0	1.3	1	0	0	1	1	1	0	Rieske	[2Fe-2S]	domain
Rad50_zn_hook	PF04423.9	gi|429216508|ref|YP_007174498.1|	-	0.072	12.5	0.4	0.3	10.6	0.2	2.2	1	1	0	1	1	1	0	Rad50	zinc	hook	motif
DZR	PF12773.2	gi|429216508|ref|YP_007174498.1|	-	0.12	12.2	0.0	0.18	11.6	0.0	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF723	PF05265.8	gi|429216508|ref|YP_007174498.1|	-	0.15	11.9	0.3	0.68	9.7	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF723)
DNA_ligase_ZBD	PF03119.11	gi|429216508|ref|YP_007174498.1|	-	9.1	6.0	6.4	0.65	9.7	0.5	2.1	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF2874	PF11396.3	gi|429216509|ref|YP_007174499.1|	-	3.4	7.7	12.0	1.5	8.8	0.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2874)
CRAL_TRIO_2	PF13716.1	gi|429216510|ref|YP_007174500.1|	-	0.12	12.2	2.4	0.13	12.2	0.6	1.6	1	1	1	2	2	2	0	Divergent	CRAL/TRIO	domain
Aldose_epim	PF01263.15	gi|429216511|ref|YP_007174501.1|	-	1.2e-35	123.1	0.0	5e-35	121.0	0.0	1.8	1	1	0	1	1	1	1	Aldose	1-epimerase
Voltage_CLC	PF00654.15	gi|429216512|ref|YP_007174502.1|	-	4.8e-70	236.3	29.6	6.8e-70	235.8	20.5	1.2	1	0	0	1	1	1	1	Voltage	gated	chloride	channel
CBS	PF00571.23	gi|429216512|ref|YP_007174502.1|	-	1.8e-15	56.4	0.0	1.3e-07	31.2	0.0	2.4	2	0	0	2	2	2	2	CBS	domain
DUF2999	PF11212.3	gi|429216512|ref|YP_007174502.1|	-	0.28	11.2	4.3	0.4	10.7	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2999)
Polyketide_cyc	PF03364.15	gi|429216513|ref|YP_007174503.1|	-	0.0094	15.9	0.0	0.01	15.7	0.0	1.2	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
YbaJ	PF10757.4	gi|429216513|ref|YP_007174503.1|	-	0.015	15.4	0.6	0.019	15.1	0.4	1.2	1	0	0	1	1	1	0	Biofilm	formation	regulator	YbaJ
R-HINP1I	PF11463.3	gi|429216513|ref|YP_007174503.1|	-	0.052	12.9	4.5	0.062	12.7	3.1	1.1	1	0	0	1	1	1	0	R.HinP1I	restriction	endonuclease
AA_permease	PF00324.16	gi|429216514|ref|YP_007174504.1|	-	1.5e-19	69.7	51.6	2.3e-19	69.1	35.8	1.3	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|429216514|ref|YP_007174504.1|	-	1.7e-13	49.9	59.6	2.2e-13	49.5	41.3	1.2	1	0	0	1	1	1	1	Amino	acid	permease
Gemini_mov	PF01708.11	gi|429216514|ref|YP_007174504.1|	-	0.061	12.8	0.1	0.061	12.8	0.0	2.1	2	0	0	2	2	2	0	Geminivirus	putative	movement	protein
DUF790	PF05626.6	gi|429216515|ref|YP_007174505.1|	-	8.3e-104	347.1	13.6	1.3e-103	346.4	9.4	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
ResIII	PF04851.10	gi|429216516|ref|YP_007174506.1|	-	2.8e-27	95.7	0.4	7.4e-26	91.1	0.0	2.8	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|429216516|ref|YP_007174506.1|	-	3.1e-19	68.5	0.1	6.6e-19	67.5	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|429216516|ref|YP_007174506.1|	-	6.3e-13	48.5	0.1	7.3e-12	45.0	0.0	2.5	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C_2	PF13307.1	gi|429216516|ref|YP_007174506.1|	-	0.00027	20.9	0.6	0.0056	16.6	0.0	3.0	3	1	0	3	3	3	1	Helicase	C-terminal	domain
AAA_22	PF13401.1	gi|429216516|ref|YP_007174506.1|	-	0.0022	18.1	0.1	0.02	15.0	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|429216516|ref|YP_007174506.1|	-	0.0034	16.8	0.0	0.027	13.8	0.0	2.3	3	0	0	3	3	3	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|429216516|ref|YP_007174506.1|	-	0.0047	16.6	0.1	0.04	13.6	0.0	2.4	3	0	0	3	3	3	1	Part	of	AAA	domain
DUF3361	PF11841.3	gi|429216516|ref|YP_007174506.1|	-	0.028	14.1	0.1	0.046	13.4	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3361)
AAA_11	PF13086.1	gi|429216516|ref|YP_007174506.1|	-	0.051	13.1	1.5	0.39	10.2	1.1	2.3	1	1	0	1	1	1	0	AAA	domain
PhoH	PF02562.11	gi|429216516|ref|YP_007174506.1|	-	0.074	12.2	0.0	0.21	10.8	0.0	1.9	1	1	0	1	1	1	0	PhoH-like	protein
Mut7-C	PF01927.11	gi|429216516|ref|YP_007174506.1|	-	0.14	12.0	0.1	0.62	10.0	0.0	1.9	2	0	0	2	2	2	0	Mut7-C	RNAse	domain
MCM_N	PF14551.1	gi|429216516|ref|YP_007174506.1|	-	0.46	10.9	3.4	1.1	9.7	1.9	2.0	1	1	0	1	1	1	0	MCM	N-terminal	domain
FMN_dh	PF01070.13	gi|429216517|ref|YP_007174507.1|	-	1e-19	70.6	0.0	8.5e-13	47.8	0.0	2.2	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|429216517|ref|YP_007174507.1|	-	0.014	14.2	0.9	0.047	12.5	0.5	1.9	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
PcrB	PF01884.12	gi|429216517|ref|YP_007174507.1|	-	0.031	13.5	5.1	0.28	10.4	0.1	2.5	2	1	0	2	2	2	0	PcrB	family
Glyco_hydro_cc	PF11790.3	gi|429216517|ref|YP_007174507.1|	-	0.031	13.7	0.0	0.05	13.0	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	catalytic	core
Glu_synthase	PF01645.12	gi|429216517|ref|YP_007174507.1|	-	0.15	10.9	1.1	0.83	8.4	0.1	2.3	3	0	0	3	3	3	0	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|429216517|ref|YP_007174507.1|	-	0.23	10.3	5.6	0.81	8.5	3.8	1.8	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
polyprenyl_synt	PF00348.12	gi|429216518|ref|YP_007174508.1|	-	4.8e-65	218.9	0.0	5.9e-65	218.6	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
tRNA-synt_1c	PF00749.16	gi|429216519|ref|YP_007174509.1|	-	7.4e-73	244.9	0.3	1.1e-72	244.3	0.0	1.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|429216519|ref|YP_007174509.1|	-	5.2e-23	81.5	2.9	7.5e-22	77.8	0.1	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
tRNA-synt_1e	PF01406.14	gi|429216519|ref|YP_007174509.1|	-	0.035	13.2	0.8	0.87	8.6	0.0	2.6	2	1	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
Voltage_CLC	PF00654.15	gi|429216520|ref|YP_007174510.1|	-	1.3	7.9	15.2	2.3	7.1	10.5	1.4	1	1	0	1	1	1	0	Voltage	gated	chloride	channel
HTH_45	PF14947.1	gi|429216521|ref|YP_007174511.1|	-	9.5e-22	76.6	4.8	1.1e-21	76.3	3.3	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|429216521|ref|YP_007174511.1|	-	3.4e-05	23.5	0.5	4.1e-05	23.2	0.3	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
S10_plectin	PF03501.10	gi|429216521|ref|YP_007174511.1|	-	0.00041	20.1	0.3	0.00054	19.7	0.2	1.2	1	0	0	1	1	1	1	Plectin/S10	domain
DUF2250	PF10007.4	gi|429216521|ref|YP_007174511.1|	-	0.0062	16.4	1.6	1.1	9.2	0.0	2.1	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|429216521|ref|YP_007174511.1|	-	0.022	14.4	1.0	0.034	13.8	0.7	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF1694	PF07997.6	gi|429216521|ref|YP_007174511.1|	-	0.026	14.4	0.5	0.03	14.2	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1694)
HxlR	PF01638.12	gi|429216521|ref|YP_007174511.1|	-	0.032	13.8	0.1	0.04	13.5	0.1	1.1	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF3116	PF11313.3	gi|429216521|ref|YP_007174511.1|	-	0.034	13.7	1.7	0.083	12.5	1.1	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
HTH_27	PF13463.1	gi|429216521|ref|YP_007174511.1|	-	0.079	13.2	0.0	0.11	12.8	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|429216521|ref|YP_007174511.1|	-	0.084	12.2	1.3	0.12	11.7	0.9	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Staphostatin_A	PF09022.5	gi|429216521|ref|YP_007174511.1|	-	0.12	12.2	1.3	0.15	11.9	0.9	1.3	1	0	0	1	1	1	0	Staphostatin	A
Rrf2	PF02082.15	gi|429216521|ref|YP_007174511.1|	-	0.13	12.4	0.1	0.19	11.8	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
Pirin	PF02678.11	gi|429216522|ref|YP_007174512.1|	-	3.1e-38	129.9	0.0	4.7e-38	129.3	0.0	1.3	1	0	0	1	1	1	1	Pirin
Pirin_C	PF05726.8	gi|429216522|ref|YP_007174512.1|	-	2.9e-29	101.2	0.0	6.3e-28	96.9	0.0	2.1	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
Cupin_2	PF07883.6	gi|429216522|ref|YP_007174512.1|	-	0.0083	15.6	1.4	0.043	13.3	0.2	2.1	2	0	0	2	2	2	1	Cupin	domain
KOW	PF00467.24	gi|429216522|ref|YP_007174512.1|	-	0.042	13.5	0.2	0.087	12.5	0.1	1.5	1	0	0	1	1	1	0	KOW	motif
Cupin_3	PF05899.7	gi|429216522|ref|YP_007174512.1|	-	0.13	11.6	0.2	4.2	6.8	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF861)
Epimerase	PF01370.16	gi|429216523|ref|YP_007174513.1|	-	6.2e-16	58.5	0.1	1.2e-15	57.5	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|429216523|ref|YP_007174513.1|	-	0.0087	14.9	0.1	0.064	12.1	0.0	2.4	2	1	0	2	2	2	1	RmlD	substrate	binding	domain
Saccharop_dh	PF03435.13	gi|429216523|ref|YP_007174513.1|	-	0.02	13.9	0.0	0.052	12.5	0.0	1.7	1	1	0	1	1	1	0	Saccharopine	dehydrogenase
Polysacc_synt_2	PF02719.10	gi|429216523|ref|YP_007174513.1|	-	0.075	11.9	0.1	0.19	10.5	0.1	1.7	2	0	0	2	2	2	0	Polysaccharide	biosynthesis	protein
LAGLIDADG_3	PF14528.1	gi|429216523|ref|YP_007174513.1|	-	0.22	11.7	1.7	0.37	11.0	0.1	2.3	2	0	0	2	2	2	0	LAGLIDADG-like	domain
Glycos_transf_1	PF00534.15	gi|429216524|ref|YP_007174514.1|	-	6.9e-21	74.4	0.2	1.1e-20	73.6	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429216524|ref|YP_007174514.1|	-	1e-11	45.1	0.0	1.5e-11	44.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|429216524|ref|YP_007174514.1|	-	1.7e-06	28.2	0.0	3.9e-06	27.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|429216524|ref|YP_007174514.1|	-	0.011	15.4	0.0	0.021	14.5	0.0	1.4	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
DUF4179	PF13786.1	gi|429216524|ref|YP_007174514.1|	-	0.011	15.8	0.4	0.03	14.5	0.3	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4179)
MFS_1	PF07690.11	gi|429216525|ref|YP_007174515.1|	-	1.1e-11	44.1	38.7	1.1e-11	44.1	26.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1	PF07690.11	gi|429216526|ref|YP_007174516.1|	-	3.3e-29	101.6	51.0	2.1e-17	62.9	14.9	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216526|ref|YP_007174516.1|	-	0.022	13.3	37.9	0.071	11.6	13.6	2.3	2	0	0	2	2	2	0	Sugar	(and	other)	transporter
tRNA-synt_2	PF00152.15	gi|429216527|ref|YP_007174517.1|	-	2.6e-91	305.8	0.1	3.4e-91	305.5	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|429216527|ref|YP_007174517.1|	-	6e-09	35.6	0.3	1.2e-08	34.6	0.2	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|429216527|ref|YP_007174517.1|	-	5.3e-08	32.3	0.3	0.00013	21.3	0.0	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|429216527|ref|YP_007174517.1|	-	0.0029	17.2	0.1	0.55	9.7	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Metallophos_2	PF12850.2	gi|429216528|ref|YP_007174518.1|	-	1.3e-27	96.5	0.0	1.7e-27	96.1	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|429216528|ref|YP_007174518.1|	-	1.4e-10	40.9	3.7	4e-10	39.4	2.6	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|429216528|ref|YP_007174518.1|	-	0.00071	18.7	0.0	1.4	8.0	0.0	2.8	2	1	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
FBPase_2	PF06874.6	gi|429216528|ref|YP_007174518.1|	-	0.012	13.6	0.0	0.07	11.1	0.0	1.9	1	1	0	1	1	1	0	Firmicute	fructose-1,6-bisphosphatase
ADH_zinc_N	PF00107.21	gi|429216529|ref|YP_007174519.1|	-	2.3e-31	108.0	0.0	3.1e-31	107.6	0.0	1.2	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|429216529|ref|YP_007174519.1|	-	3e-22	78.4	0.0	5.1e-22	77.7	0.0	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|429216529|ref|YP_007174519.1|	-	3.2e-11	44.2	0.0	4.8e-11	43.6	0.0	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|429216529|ref|YP_007174519.1|	-	0.0069	16.3	0.0	0.014	15.3	0.0	1.5	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|429216529|ref|YP_007174519.1|	-	0.015	14.8	0.0	0.028	14.0	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
YcxB	PF14317.1	gi|429216530|ref|YP_007174520.1|	-	0.0029	16.7	1.9	0.006	15.8	0.8	2.0	2	0	0	2	2	2	1	YcxB-like	protein
PspC	PF04024.7	gi|429216530|ref|YP_007174520.1|	-	1.4	8.4	9.1	2.8	7.4	6.3	1.5	1	0	0	1	1	1	0	PspC	domain
Tmemb_9	PF05434.6	gi|429216530|ref|YP_007174520.1|	-	1.7	8.3	4.6	2.8	7.6	2.9	1.5	1	1	0	1	1	1	0	TMEM9
APH	PF01636.18	gi|429216531|ref|YP_007174521.1|	-	5.6e-05	22.9	0.0	8.7e-05	22.3	0.0	1.4	1	1	0	1	1	1	1	Phosphotransferase	enzyme	family
Glyco_hydro_15	PF00723.16	gi|429216533|ref|YP_007174523.1|	-	2e-17	62.9	0.7	1.9e-12	46.5	1.8	2.3	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|429216533|ref|YP_007174523.1|	-	3.2e-06	26.0	2.8	6.6e-06	25.0	2.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
TPR_19	PF14559.1	gi|429216533|ref|YP_007174523.1|	-	0.027	14.7	0.0	0.064	13.6	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
GCHY-1	PF02649.9	gi|429216534|ref|YP_007174524.1|	-	2.9e-46	157.9	0.0	3.3e-46	157.7	0.0	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
B5	PF03484.10	gi|429216535|ref|YP_007174525.1|	-	3.3e-19	68.4	3.7	5.8e-17	61.2	0.7	2.9	3	0	0	3	3	3	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|429216535|ref|YP_007174525.1|	-	3.5e-09	36.3	0.9	8.6e-09	35.0	0.1	2.0	2	1	0	2	2	2	1	B3/4	domain
tRNA-synt_2d	PF01409.15	gi|429216536|ref|YP_007174526.1|	-	4.1e-83	278.3	0.0	5.5e-83	277.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|429216536|ref|YP_007174526.1|	-	0.00036	19.4	6.8	0.053	12.2	0.0	3.7	4	1	0	4	4	4	2	tRNA	synthetases	class	II	(D,	K	and	N)
HTH_45	PF14947.1	gi|429216536|ref|YP_007174526.1|	-	0.0061	16.3	2.8	0.018	14.8	1.9	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|429216536|ref|YP_007174526.1|	-	0.0092	15.6	3.0	0.012	15.2	1.2	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|429216536|ref|YP_007174526.1|	-	0.042	14.1	0.1	0.092	13.0	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
tRNA-synt_2b	PF00587.20	gi|429216536|ref|YP_007174526.1|	-	0.076	12.5	0.0	0.76	9.3	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
AAA_assoc_C	PF09821.4	gi|429216536|ref|YP_007174526.1|	-	0.08	13.2	1.2	0.16	12.2	0.1	2.0	2	1	1	3	3	3	0	C-terminal	AAA-associated	domain
MarR_2	PF12802.2	gi|429216536|ref|YP_007174526.1|	-	0.12	12.0	0.0	0.44	10.2	0.0	2.0	2	0	0	2	2	2	0	MarR	family
Peptidase_M19	PF01244.16	gi|429216537|ref|YP_007174527.1|	-	3.2e-65	220.1	0.0	3.6e-65	219.9	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
Amidohydro_2	PF04909.9	gi|429216537|ref|YP_007174527.1|	-	4.4e-05	23.1	0.0	0.0015	18.1	0.0	2.3	1	1	0	1	1	1	1	Amidohydrolase
PHP	PF02811.14	gi|429216537|ref|YP_007174527.1|	-	0.017	14.9	0.0	0.028	14.1	0.0	1.4	1	0	0	1	1	1	0	PHP	domain
Pyr_excise	PF03013.9	gi|429216538|ref|YP_007174528.1|	-	0.00011	21.9	1.4	0.00021	21.0	1.0	1.6	1	1	0	1	1	1	1	Pyrimidine	dimer	DNA	glycosylase
COX16	PF14138.1	gi|429216538|ref|YP_007174528.1|	-	1.9	8.6	5.8	0.77	9.9	2.5	1.5	2	0	0	2	2	2	0	Cytochrome	c	oxidase	assembly	protein	COX16
KaiC	PF06745.8	gi|429216539|ref|YP_007174529.1|	-	1.3e-42	145.4	1.3	1.3e-42	145.4	0.9	1.7	2	0	0	2	2	2	1	KaiC
AAA_25	PF13481.1	gi|429216539|ref|YP_007174529.1|	-	5.7e-10	38.9	0.0	1e-09	38.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|429216539|ref|YP_007174529.1|	-	2.4e-08	32.7	1.3	2.4e-08	32.7	0.9	1.6	2	1	0	2	2	2	1	GvpD	gas	vesicle	protein
Zot	PF05707.7	gi|429216539|ref|YP_007174529.1|	-	2.4e-05	23.9	0.0	0.00019	20.9	0.0	2.2	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_17	PF13207.1	gi|429216539|ref|YP_007174529.1|	-	9.3e-05	23.2	1.4	0.00042	21.1	0.2	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|429216539|ref|YP_007174529.1|	-	0.00046	20.4	2.3	0.00058	20.1	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|429216539|ref|YP_007174529.1|	-	0.00075	19.5	0.0	0.0012	18.8	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|429216539|ref|YP_007174529.1|	-	0.0008	18.8	0.0	0.0017	17.8	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_22	PF13401.1	gi|429216539|ref|YP_007174529.1|	-	0.0009	19.3	0.0	0.002	18.2	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|429216539|ref|YP_007174529.1|	-	0.0015	18.4	0.3	0.0041	17.0	0.2	1.9	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|429216539|ref|YP_007174529.1|	-	0.004	17.4	0.0	0.0072	16.6	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
DUF2075	PF09848.4	gi|429216539|ref|YP_007174529.1|	-	0.0044	16.0	0.0	0.0063	15.5	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Zeta_toxin	PF06414.7	gi|429216539|ref|YP_007174529.1|	-	0.0053	15.8	0.0	0.0088	15.1	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
ATP-synt_ab	PF00006.20	gi|429216539|ref|YP_007174529.1|	-	0.0077	15.7	0.3	0.025	14.1	0.2	1.8	1	1	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|429216539|ref|YP_007174529.1|	-	0.0081	15.7	0.3	0.12	12.0	0.1	2.4	1	1	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|429216539|ref|YP_007174529.1|	-	0.011	15.9	0.1	0.044	13.9	0.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|429216539|ref|YP_007174529.1|	-	0.013	14.3	0.2	0.09	11.6	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
PhoH	PF02562.11	gi|429216539|ref|YP_007174529.1|	-	0.043	13.0	0.0	0.082	12.1	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
APS_kinase	PF01583.15	gi|429216539|ref|YP_007174529.1|	-	0.059	13.0	0.0	0.098	12.3	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_5	PF07728.9	gi|429216539|ref|YP_007174529.1|	-	0.085	12.5	0.1	1.5	8.5	0.1	2.3	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
DnaB_C	PF03796.10	gi|429216539|ref|YP_007174529.1|	-	0.093	11.5	0.3	0.43	9.4	0.2	2.0	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
SRP54	PF00448.17	gi|429216539|ref|YP_007174529.1|	-	0.095	12.1	0.0	0.36	10.2	0.0	2.0	2	1	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_19	PF13245.1	gi|429216539|ref|YP_007174529.1|	-	0.099	12.4	0.0	0.2	11.4	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|429216539|ref|YP_007174529.1|	-	0.11	11.6	0.0	0.17	10.9	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Sigma54_activ_2	PF14532.1	gi|429216539|ref|YP_007174529.1|	-	0.13	12.3	0.0	0.31	11.1	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|429216539|ref|YP_007174529.1|	-	0.16	11.6	0.0	0.43	10.2	0.0	1.8	1	1	0	1	1	1	0	NACHT	domain
Nitroreductase	PF00881.19	gi|429216540|ref|YP_007174530.1|	-	4.4e-24	85.1	0.2	7.4e-24	84.4	0.1	1.4	1	1	0	1	1	1	1	Nitroreductase	family
NMT	PF01233.14	gi|429216540|ref|YP_007174530.1|	-	0.038	13.6	0.0	0.063	12.8	0.0	1.4	1	0	0	1	1	1	0	Myristoyl-CoA:protein	N-myristoyltransferase,	N-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|429216541|ref|YP_007174531.1|	-	4e-45	153.1	0.0	7.6e-45	152.2	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|429216541|ref|YP_007174531.1|	-	1.2e-20	73.3	0.0	1.4e-20	73.1	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|429216541|ref|YP_007174531.1|	-	8.7e-07	28.9	0.0	2.5e-06	27.4	0.0	1.7	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|429216541|ref|YP_007174531.1|	-	0.00085	18.7	0.1	0.011	15.0	0.0	2.1	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ThiF	PF00899.16	gi|429216541|ref|YP_007174531.1|	-	0.0043	16.8	1.0	0.18	11.5	0.1	2.7	2	1	1	3	3	3	1	ThiF	family
Glyco_trans_1_4	PF13692.1	gi|429216541|ref|YP_007174531.1|	-	0.014	15.5	0.0	1.6	8.9	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
NAD_kinase	PF01513.16	gi|429216542|ref|YP_007174532.1|	-	2.8e-14	52.5	0.1	5.8e-14	51.5	0.0	1.5	2	0	0	2	2	2	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|429216542|ref|YP_007174532.1|	-	5.3e-05	22.6	0.0	0.0081	15.5	0.0	2.3	2	0	0	2	2	2	2	Diacylglycerol	kinase	catalytic	domain
PS_pyruv_trans	PF04230.8	gi|429216542|ref|YP_007174532.1|	-	0.019	14.6	0.4	0.022	14.4	0.3	1.4	1	1	0	1	1	1	0	Polysaccharide	pyruvyl	transferase
Biotin_lipoyl	PF00364.17	gi|429216543|ref|YP_007174533.1|	-	6.9e-16	57.6	0.7	7.2e-16	57.5	0.5	1.1	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|429216543|ref|YP_007174533.1|	-	1.5e-08	34.1	0.5	0.0029	17.2	0.1	2.1	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|429216543|ref|YP_007174533.1|	-	3.6e-05	23.2	0.3	0.0042	16.4	0.1	2.0	2	0	0	2	2	2	2	HlyD	family	secretion	protein
QRPTase_N	PF02749.11	gi|429216543|ref|YP_007174533.1|	-	0.00011	22.0	0.1	0.048	13.4	0.0	2.1	1	1	1	2	2	2	2	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
HlyD_2	PF12700.2	gi|429216543|ref|YP_007174533.1|	-	0.00074	18.7	0.7	0.24	10.5	0.2	2.0	1	1	1	2	2	2	2	HlyD	family	secretion	protein
PYNP_C	PF07831.8	gi|429216543|ref|YP_007174533.1|	-	0.0022	17.3	0.3	0.2	11.1	0.1	2.1	1	1	1	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
HlyD_3	PF13437.1	gi|429216543|ref|YP_007174533.1|	-	0.01	16.1	0.2	0.52	10.6	0.0	2.0	1	1	1	2	2	2	0	HlyD	family	secretion	protein
PASTA	PF03793.14	gi|429216543|ref|YP_007174533.1|	-	0.041	13.5	0.7	0.88	9.2	0.2	2.0	1	1	1	2	2	2	0	PASTA	domain
Peptidase_M23	PF01551.17	gi|429216543|ref|YP_007174533.1|	-	0.049	13.6	0.1	3.9	7.5	0.0	2.1	1	1	1	2	2	2	0	Peptidase	family	M23
RnfC_N	PF13375.1	gi|429216543|ref|YP_007174533.1|	-	0.057	13.1	0.5	0.15	11.7	0.3	1.6	1	1	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
DUF2118	PF09891.4	gi|429216543|ref|YP_007174533.1|	-	0.077	12.7	0.1	0.87	9.2	0.1	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
GCV_H	PF01597.14	gi|429216543|ref|YP_007174533.1|	-	0.14	11.8	2.1	1.6	8.4	0.9	2.0	1	1	1	2	2	2	0	Glycine	cleavage	H-protein
E1_dh	PF00676.15	gi|429216544|ref|YP_007174534.1|	-	5.6e-85	284.6	0.0	7.8e-85	284.1	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
Transket_pyr	PF02779.19	gi|429216544|ref|YP_007174534.1|	-	2.9e-46	157.2	0.0	1.3e-45	155.0	0.0	2.0	2	0	0	2	2	2	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|429216544|ref|YP_007174534.1|	-	7.7e-34	116.3	0.9	5e-33	113.6	0.1	2.4	3	0	0	3	3	3	1	Transketolase,	C-terminal	domain
TPP_enzyme_C	PF02775.16	gi|429216544|ref|YP_007174534.1|	-	1.1e-06	28.3	0.5	1.4e-05	24.7	0.2	2.7	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|429216544|ref|YP_007174534.1|	-	0.00013	20.9	0.0	0.00028	19.9	0.0	1.5	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Transketolase_N	PF00456.16	gi|429216544|ref|YP_007174534.1|	-	0.00024	20.0	0.0	0.00039	19.3	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
OsmC	PF02566.14	gi|429216545|ref|YP_007174535.1|	-	1.4e-12	47.6	0.0	1.8e-12	47.3	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
CS	PF04969.11	gi|429216545|ref|YP_007174535.1|	-	0.095	13.2	0.2	0.21	12.1	0.0	1.6	2	0	0	2	2	2	0	CS	domain
2-oxoacid_dh	PF00198.18	gi|429216546|ref|YP_007174536.1|	-	2.4e-70	236.4	0.1	3.1e-70	236.0	0.0	1.0	1	0	0	1	1	1	1	2-oxoacid	dehydrogenases	acyltransferase	(catalytic	domain)
AATase	PF07247.7	gi|429216546|ref|YP_007174536.1|	-	0.00042	18.9	1.7	0.059	11.9	0.0	2.6	2	1	0	3	3	3	2	Alcohol	acetyltransferase
Condensation	PF00668.15	gi|429216546|ref|YP_007174536.1|	-	0.011	14.5	0.0	0.021	13.6	0.0	1.4	1	0	0	1	1	1	0	Condensation	domain
M20_dimer	PF07687.9	gi|429216546|ref|YP_007174536.1|	-	0.027	14.2	0.0	0.56	9.9	0.0	2.5	2	1	0	2	2	2	0	Peptidase	dimerisation	domain
Transferase	PF02458.10	gi|429216546|ref|YP_007174536.1|	-	0.087	11.2	0.2	0.19	10.1	0.0	1.6	2	0	0	2	2	2	0	Transferase	family
ThiS	PF02597.15	gi|429216547|ref|YP_007174537.1|	-	7.8e-06	26.2	0.1	1.2e-05	25.6	0.1	1.4	1	1	0	1	1	1	1	ThiS	family
Urm1	PF09138.6	gi|429216547|ref|YP_007174537.1|	-	0.074	13.1	1.1	0.14	12.3	0.8	1.5	1	1	0	1	1	1	0	Urm1	(Ubiquitin	related	modifier)
AIM24	PF01987.12	gi|429216548|ref|YP_007174538.1|	-	9.9e-48	162.4	1.9	1.1e-47	162.2	1.3	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
FAD_binding_2	PF00890.19	gi|429216549|ref|YP_007174539.1|	-	1.8e-102	343.3	0.0	2.2e-102	343.0	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|429216549|ref|YP_007174539.1|	-	5.8e-42	142.5	0.0	8.6e-42	142.0	0.0	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|429216549|ref|YP_007174539.1|	-	0.0033	16.3	0.1	0.0055	15.6	0.1	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|429216549|ref|YP_007174539.1|	-	0.005	16.7	0.8	0.039	13.8	0.2	2.3	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|429216549|ref|YP_007174539.1|	-	0.022	14.7	0.1	0.06	13.3	0.1	1.8	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|429216549|ref|YP_007174539.1|	-	0.028	13.5	0.1	0.66	9.0	0.1	2.2	2	0	0	2	2	2	0	Thi4	family
Glyco_tranf_2_3	PF13641.1	gi|429216550|ref|YP_007174540.1|	-	5.2e-27	95.1	0.0	6.7e-27	94.7	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|429216550|ref|YP_007174540.1|	-	9.6e-22	77.6	0.0	1.5e-21	76.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|429216550|ref|YP_007174540.1|	-	9.2e-18	64.4	0.1	1.4e-17	63.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|429216550|ref|YP_007174540.1|	-	2.7e-07	30.0	0.0	4.8e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|429216550|ref|YP_007174540.1|	-	6.7e-07	28.6	0.0	9.1e-07	28.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Gate	PF07670.9	gi|429216550|ref|YP_007174540.1|	-	0.0074	16.1	2.7	0.58	10.0	0.6	2.6	2	0	0	2	2	2	2	Nucleoside	recognition
MFS_1	PF07690.11	gi|429216551|ref|YP_007174541.1|	-	7.2e-28	97.3	36.1	1.4e-27	96.3	22.7	2.0	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216551|ref|YP_007174541.1|	-	2.4e-05	23.1	27.9	0.00035	19.2	2.2	3.1	1	1	2	3	3	3	3	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|429216551|ref|YP_007174541.1|	-	7e-05	21.1	0.9	7e-05	21.1	0.6	1.6	2	0	0	2	2	2	1	Transmembrane	secretion	effector
NUDIX	PF00293.23	gi|429216553|ref|YP_007174543.1|	-	3e-19	69.0	0.0	3.5e-19	68.7	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
GatB_N	PF02934.10	gi|429216554|ref|YP_007174544.1|	-	9.2e-82	274.1	0.3	1.5e-81	273.4	0.2	1.3	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|429216554|ref|YP_007174544.1|	-	1.1e-24	86.8	10.7	1.1e-24	86.8	7.4	2.3	3	0	0	3	3	3	1	GatB	domain
GAD	PF02938.9	gi|429216554|ref|YP_007174544.1|	-	5.6e-18	64.8	0.4	5.6e-18	64.8	0.3	2.6	2	1	1	3	3	3	1	GAD	domain
YqeY	PF09424.5	gi|429216554|ref|YP_007174544.1|	-	0.00043	20.1	7.2	0.0013	18.5	4.0	2.5	1	1	1	2	2	2	1	Yqey-like	protein
Asparaginase	PF00710.15	gi|429216555|ref|YP_007174545.1|	-	2.7e-90	302.4	0.0	3.3e-90	302.1	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
Ribosomal_S30	PF04758.9	gi|429216556|ref|YP_007174546.1|	-	1.2e-10	40.9	3.0	1.4e-10	40.7	2.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Nop	PF01798.13	gi|429216557|ref|YP_007174547.1|	-	3.4e-53	178.9	0.3	5.8e-53	178.2	0.2	1.4	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|429216557|ref|YP_007174547.1|	-	1.1e-20	73.1	0.0	3.6e-20	71.4	0.0	2.0	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
Ribosomal_S2	PF00318.15	gi|429216557|ref|YP_007174547.1|	-	0.041	13.1	0.7	1.3	8.2	0.1	2.5	2	1	0	2	2	2	0	Ribosomal	protein	S2
DUF1690	PF07956.6	gi|429216557|ref|YP_007174547.1|	-	3	7.8	7.9	1.3	9.0	0.4	2.6	3	0	0	3	3	3	0	Protein	of	Unknown	function	(DUF1690)
Fibrillarin	PF01269.12	gi|429216558|ref|YP_007174548.1|	-	4.1e-97	323.5	0.1	4.6e-97	323.4	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
PCMT	PF01135.14	gi|429216558|ref|YP_007174548.1|	-	0.00042	19.9	0.0	0.00074	19.1	0.0	1.6	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF61	PF01886.11	gi|429216559|ref|YP_007174549.1|	-	4.9e-12	45.8	0.9	6.2e-12	45.4	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
Pox_polyA_pol_N	PF12630.2	gi|429216559|ref|YP_007174549.1|	-	0.38	10.8	3.2	3.5	7.7	0.1	2.5	1	1	1	3	3	3	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
PALP	PF00291.20	gi|429216560|ref|YP_007174550.1|	-	1e-71	241.6	0.3	1.2e-71	241.4	0.2	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.20	gi|429216560|ref|YP_007174550.1|	-	0.003	16.9	0.0	0.0076	15.7	0.0	1.7	1	0	0	1	1	1	1	ACT	domain
DUF627	PF04781.7	gi|429216560|ref|YP_007174550.1|	-	0.046	13.3	0.0	0.13	11.8	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF627)
SopA	PF13981.1	gi|429216561|ref|YP_007174551.1|	-	0.0047	16.9	3.8	0.038	14.0	1.2	2.3	2	0	0	2	2	2	2	SopA-like	central	domain
TPP_enzyme_C	PF02775.16	gi|429216562|ref|YP_007174552.1|	-	8.8e-28	96.8	0.4	1.4e-27	96.1	0.0	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|429216562|ref|YP_007174552.1|	-	3.7e-08	33.1	0.4	7.9e-07	28.9	0.3	2.3	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
POR_N	PF01855.14	gi|429216563|ref|YP_007174553.1|	-	8.2e-61	205.4	0.0	1.2e-60	204.9	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|429216563|ref|YP_007174553.1|	-	6.7e-31	107.5	0.1	1.7e-30	106.2	0.1	1.7	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|429216563|ref|YP_007174553.1|	-	0.013	14.9	0.0	0.024	14.1	0.0	1.4	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
ETF_alpha	PF00766.14	gi|429216564|ref|YP_007174554.1|	-	7.9e-29	99.1	0.0	3.2e-28	97.1	0.0	2.0	3	0	0	3	3	3	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|429216564|ref|YP_007174554.1|	-	6.9e-07	29.1	0.0	1.7e-06	27.8	0.0	1.6	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	domain
ETF	PF01012.16	gi|429216565|ref|YP_007174555.1|	-	4.3e-30	104.5	0.0	6.2e-30	104.0	0.0	1.2	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Lon_C	PF05362.8	gi|429216565|ref|YP_007174555.1|	-	0.0056	16.0	0.0	0.012	14.9	0.0	1.5	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
DUF424	PF04242.8	gi|429216566|ref|YP_007174556.1|	-	4.4e-22	77.9	0.7	5.3e-22	77.6	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
TPP_enzyme_C	PF02775.16	gi|429216567|ref|YP_007174557.1|	-	2.9e-27	95.1	0.0	4.5e-27	94.5	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|429216567|ref|YP_007174557.1|	-	6.1e-08	32.4	0.1	1.2e-06	28.2	0.1	2.3	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
POR_N	PF01855.14	gi|429216568|ref|YP_007174558.1|	-	2.5e-51	174.4	0.0	3.7e-51	173.8	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|429216568|ref|YP_007174558.1|	-	6.7e-36	123.7	0.2	1.4e-35	122.6	0.1	1.5	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|429216568|ref|YP_007174558.1|	-	1.7e-08	34.4	0.1	1.1e-07	31.7	0.0	2.4	3	0	0	3	3	3	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|429216568|ref|YP_007174558.1|	-	0.0011	18.5	1.3	0.0028	17.1	0.9	1.7	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
CW_binding_2	PF04122.7	gi|429216568|ref|YP_007174558.1|	-	0.022	14.9	0.0	0.14	12.3	0.0	2.4	2	0	0	2	2	2	0	Putative	cell	wall	binding	repeat	2
DUF4375	PF14300.1	gi|429216568|ref|YP_007174558.1|	-	0.13	12.2	0.0	0.59	10.1	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4375)
DUF4355	PF14265.1	gi|429216568|ref|YP_007174558.1|	-	0.16	11.9	0.1	0.42	10.5	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
OCIA	PF07051.6	gi|429216570|ref|YP_007174560.1|	-	0.051	12.9	0.1	0.096	12.0	0.0	1.4	1	0	0	1	1	1	0	Ovarian	carcinoma	immunoreactive	antigen	(OCIA)
GHMP_kinases_N	PF00288.21	gi|429216570|ref|YP_007174560.1|	-	0.12	12.4	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
DUF137	PF02006.11	gi|429216571|ref|YP_007174561.1|	-	4.8e-67	224.7	0.3	5.9e-67	224.4	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
INTS5_C	PF14838.1	gi|429216571|ref|YP_007174561.1|	-	0.043	12.0	0.1	0.056	11.7	0.1	1.1	1	0	0	1	1	1	0	Integrator	complex	subunit	5	C-terminus
NTP_transf_3	PF12804.2	gi|429216572|ref|YP_007174562.1|	-	1.3e-20	74.1	0.0	1.7e-20	73.7	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.14	gi|429216572|ref|YP_007174562.1|	-	5.2e-09	36.0	0.0	5.3e-09	36.0	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transferase	PF00483.18	gi|429216572|ref|YP_007174562.1|	-	3e-05	23.4	0.0	4.7e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
CofC	PF01983.11	gi|429216572|ref|YP_007174562.1|	-	0.0011	17.9	0.0	0.0018	17.2	0.0	1.3	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
Spuma_A9PTase	PF03539.9	gi|429216572|ref|YP_007174562.1|	-	0.087	12.7	0.1	0.2	11.5	0.0	1.7	2	0	0	2	2	2	0	Spumavirus	aspartic	protease	(A9)
HAD_2	PF13419.1	gi|429216573|ref|YP_007174563.1|	-	7e-18	65.4	0.0	8.3e-18	65.2	0.0	1.0	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|429216573|ref|YP_007174563.1|	-	6.7e-08	33.1	0.0	5.1e-07	30.3	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|429216573|ref|YP_007174563.1|	-	0.0037	16.9	0.0	0.0078	15.9	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
GGDN	PF05165.7	gi|429216574|ref|YP_007174564.1|	-	1.9e-45	154.8	0.2	4.6e-45	153.5	0.1	1.5	1	1	0	1	1	1	1	GGDN	family
DMRL_synthase	PF00885.14	gi|429216575|ref|YP_007174565.1|	-	4e-32	110.8	0.0	4.5e-32	110.7	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
NTP_transf_2	PF01909.18	gi|429216576|ref|YP_007174566.1|	-	6.3e-08	32.8	2.0	1.4e-07	31.7	1.4	1.9	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF309	PF03745.9	gi|429216578|ref|YP_007174568.1|	-	3e-08	32.9	0.2	4.3e-08	32.4	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
NAD_kinase	PF01513.16	gi|429216579|ref|YP_007174569.1|	-	2.1e-45	154.6	0.9	2.4e-45	154.4	0.6	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
ABC_tran	PF00005.22	gi|429216580|ref|YP_007174570.1|	-	3.7e-32	111.4	0.0	8.8e-32	110.2	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|429216580|ref|YP_007174570.1|	-	4.5e-20	71.7	0.1	8.6e-20	70.8	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|429216580|ref|YP_007174570.1|	-	3.2e-12	47.0	7.1	8.8e-12	45.5	1.7	2.7	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|429216580|ref|YP_007174570.1|	-	2.6e-06	26.8	1.2	0.00034	19.9	0.0	2.8	2	1	1	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|429216580|ref|YP_007174570.1|	-	7.1e-05	22.3	0.7	0.063	12.7	0.0	2.3	1	1	1	2	2	2	2	AAA-like	domain
AAA_16	PF13191.1	gi|429216580|ref|YP_007174570.1|	-	0.00013	21.9	0.0	0.00023	21.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_13	PF13166.1	gi|429216580|ref|YP_007174570.1|	-	0.00014	20.5	1.2	0.053	11.9	0.0	3.4	4	0	0	4	4	4	1	AAA	domain
AAA_22	PF13401.1	gi|429216580|ref|YP_007174570.1|	-	0.00021	21.4	2.0	0.12	12.4	0.3	2.6	2	1	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|429216580|ref|YP_007174570.1|	-	0.00028	21.1	1.0	0.00062	20.0	0.0	2.2	3	0	0	3	3	2	1	AAA	domain
AAA_25	PF13481.1	gi|429216580|ref|YP_007174570.1|	-	0.00043	19.7	0.0	0.79	9.0	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|429216580|ref|YP_007174570.1|	-	0.0015	18.0	0.0	0.0027	17.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|429216580|ref|YP_007174570.1|	-	0.015	14.5	0.1	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
PRK	PF00485.13	gi|429216580|ref|YP_007174570.1|	-	0.017	14.7	0.0	0.07	12.6	0.0	1.9	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_17	PF13207.1	gi|429216580|ref|YP_007174570.1|	-	0.019	15.7	1.6	0.05	14.4	0.2	2.3	2	1	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|429216580|ref|YP_007174570.1|	-	0.023	14.4	0.1	0.09	12.4	0.0	2.0	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_23	PF13476.1	gi|429216580|ref|YP_007174570.1|	-	0.03	14.6	1.8	0.23	11.7	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
AAA_14	PF13173.1	gi|429216580|ref|YP_007174570.1|	-	0.033	14.0	0.1	3.5	7.5	0.0	3.0	1	1	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|429216580|ref|YP_007174570.1|	-	0.045	13.6	0.0	0.15	11.9	0.0	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|429216580|ref|YP_007174570.1|	-	0.054	12.5	9.5	0.27	10.2	0.0	3.0	3	0	0	3	3	3	0	AAA	ATPase	domain
AAA_5	PF07728.9	gi|429216580|ref|YP_007174570.1|	-	0.092	12.4	0.0	0.33	10.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.12	gi|429216580|ref|YP_007174570.1|	-	0.099	12.0	0.0	9.3	5.6	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF87	PF01935.12	gi|429216580|ref|YP_007174570.1|	-	0.99	9.1	4.4	0.92	9.2	0.3	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	DUF87
ABC_tran	PF00005.22	gi|429216581|ref|YP_007174571.1|	-	9.3e-27	93.9	0.0	1.1e-24	87.2	0.0	2.6	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|429216581|ref|YP_007174571.1|	-	5.9e-22	77.7	0.1	2.3e-21	75.8	0.1	2.0	2	0	0	2	2	2	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|429216581|ref|YP_007174571.1|	-	3.9e-12	46.7	6.0	8.6e-11	42.3	4.2	2.6	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|429216581|ref|YP_007174571.1|	-	7.9e-08	31.7	2.2	1.4e-06	27.7	0.2	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
GatB_Yqey	PF02637.13	gi|429216581|ref|YP_007174571.1|	-	0.002	17.8	1.0	0.0038	16.9	0.2	1.8	2	0	0	2	2	2	1	GatB	domain
AAA_18	PF13238.1	gi|429216581|ref|YP_007174571.1|	-	0.0026	18.0	3.6	0.048	13.9	0.0	2.6	2	1	1	3	3	2	1	AAA	domain
PRK	PF00485.13	gi|429216581|ref|YP_007174571.1|	-	0.0056	16.2	0.0	0.01	15.4	0.0	1.5	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_29	PF13555.1	gi|429216581|ref|YP_007174571.1|	-	0.017	14.6	0.0	0.031	13.8	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|429216581|ref|YP_007174571.1|	-	0.022	14.7	0.0	0.045	13.7	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
OSCP	PF00213.13	gi|429216581|ref|YP_007174571.1|	-	0.04	13.7	0.0	0.11	12.3	0.0	1.7	1	0	0	1	1	1	0	ATP	synthase	delta	(OSCP)	subunit
SbcCD_C	PF13558.1	gi|429216581|ref|YP_007174571.1|	-	0.053	13.4	0.0	0.19	11.6	0.0	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Zeta_toxin	PF06414.7	gi|429216581|ref|YP_007174571.1|	-	0.06	12.4	0.0	0.15	11.1	0.0	1.8	1	1	0	1	1	1	0	Zeta	toxin
AAA_22	PF13401.1	gi|429216581|ref|YP_007174571.1|	-	0.072	13.2	0.1	1.1	9.4	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_13	PF13166.1	gi|429216581|ref|YP_007174571.1|	-	0.09	11.2	0.1	0.09	11.2	0.1	2.3	3	0	0	3	3	3	0	AAA	domain
AAA_25	PF13481.1	gi|429216581|ref|YP_007174571.1|	-	0.11	11.8	0.1	0.69	9.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|429216581|ref|YP_007174571.1|	-	0.12	13.1	0.2	0.33	11.7	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|429216581|ref|YP_007174571.1|	-	0.13	11.4	0.1	0.68	9.0	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
BPD_transp_1	PF00528.17	gi|429216582|ref|YP_007174572.1|	-	4.3e-31	107.8	15.4	4.3e-31	107.8	10.7	1.6	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|429216582|ref|YP_007174572.1|	-	3.6e-05	23.0	1.5	3.6e-05	23.0	1.1	3.2	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|429216583|ref|YP_007174573.1|	-	9.3e-34	116.5	11.2	9.3e-34	116.5	7.8	2.8	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
MacB_PCD	PF12704.2	gi|429216583|ref|YP_007174573.1|	-	0.088	12.3	1.6	0.1	12.1	0.1	2.0	2	1	0	2	2	2	0	MacB-like	periplasmic	core	domain
SBP_bac_5	PF00496.17	gi|429216584|ref|YP_007174574.1|	-	2.5e-52	177.9	6.6	5.8e-52	176.7	4.6	1.6	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|429216584|ref|YP_007174574.1|	-	2.8e-06	26.9	15.4	5e-06	26.1	0.5	4.8	4	1	1	5	5	5	2	PKD	domain
Shisa	PF13908.1	gi|429216584|ref|YP_007174574.1|	-	0.88	9.7	3.6	0.38	10.9	0.4	1.8	2	0	0	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
Tir_receptor_C	PF07489.6	gi|429216584|ref|YP_007174574.1|	-	1.3	8.7	8.4	2.4	7.8	5.8	1.4	1	0	0	1	1	1	0	Translocated	intimin	receptor	(Tir)	C-terminus
Asparaginase_2	PF01112.13	gi|429216585|ref|YP_007174575.1|	-	5.1e-64	216.0	0.4	6e-64	215.7	0.3	1.0	1	0	0	1	1	1	1	Asparaginase
TrmB	PF01978.14	gi|429216586|ref|YP_007174576.1|	-	5.5e-18	64.4	1.8	1.6e-16	59.7	0.1	2.7	3	0	0	3	3	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|429216586|ref|YP_007174576.1|	-	0.00019	21.1	1.1	0.0013	18.4	0.1	2.7	1	1	1	2	2	2	1	Winged	helix-turn-helix
DUF2250	PF10007.4	gi|429216586|ref|YP_007174576.1|	-	0.0015	18.3	0.1	0.004	17.0	0.1	1.8	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_24	PF13412.1	gi|429216586|ref|YP_007174576.1|	-	0.005	16.1	0.3	0.016	14.5	0.0	2.1	2	1	1	3	3	3	1	Winged	helix-turn-helix	DNA-binding
DUF4423	PF14394.1	gi|429216586|ref|YP_007174576.1|	-	0.008	15.7	0.3	0.025	14.1	0.2	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
MarR	PF01047.17	gi|429216586|ref|YP_007174576.1|	-	0.013	15.2	0.0	0.029	14.0	0.0	1.6	1	0	0	1	1	1	0	MarR	family
MarR_2	PF12802.2	gi|429216586|ref|YP_007174576.1|	-	0.019	14.6	0.0	0.035	13.7	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_36	PF13730.1	gi|429216586|ref|YP_007174576.1|	-	0.019	15.1	0.1	0.055	13.6	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
PadR	PF03551.9	gi|429216586|ref|YP_007174576.1|	-	0.019	14.7	1.2	0.058	13.1	0.0	2.5	3	0	0	3	3	3	0	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|429216586|ref|YP_007174576.1|	-	0.024	14.9	0.0	0.051	13.9	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Phage_rep_org_N	PF09681.5	gi|429216586|ref|YP_007174576.1|	-	0.041	13.4	0.6	0.16	11.5	0.2	2.2	2	0	0	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Hpr_kinase_N	PF02603.11	gi|429216586|ref|YP_007174576.1|	-	0.046	13.4	0.6	0.63	9.7	0.4	2.5	1	1	0	1	1	1	0	HPr	Serine	kinase	N	terminus
B-block_TFIIIC	PF04182.7	gi|429216586|ref|YP_007174576.1|	-	0.056	13.2	0.3	0.14	11.9	0.2	1.8	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Rrf2	PF02082.15	gi|429216586|ref|YP_007174576.1|	-	0.067	13.3	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
PadR	PF03551.9	gi|429216587|ref|YP_007174577.1|	-	4.2e-11	42.4	0.4	1e-10	41.2	0.0	1.8	2	1	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|429216587|ref|YP_007174577.1|	-	0.00058	19.6	0.5	0.0019	17.9	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
Mrr_N	PF14338.1	gi|429216587|ref|YP_007174577.1|	-	0.08	13.0	0.1	0.28	11.3	0.0	1.8	2	0	0	2	2	2	0	Mrr	N-terminal	domain
Phage_integrase	PF00589.17	gi|429216588|ref|YP_007174578.1|	-	5.9e-33	113.9	0.1	2.2e-32	112.0	0.0	1.9	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|429216588|ref|YP_007174578.1|	-	3.3e-10	40.1	0.4	5.1e-07	29.9	0.0	2.6	1	1	1	2	2	2	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|429216588|ref|YP_007174578.1|	-	9.3e-06	25.7	0.2	0.00029	20.9	0.0	3.0	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_3	PF14659.1	gi|429216588|ref|YP_007174578.1|	-	0.002	18.3	3.4	0.0023	18.1	1.1	2.1	1	1	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
TF_Zn_Ribbon	PF08271.7	gi|429216589|ref|YP_007174579.1|	-	1.9e-09	36.6	1.5	6e-09	35.0	0.0	2.4	3	0	0	3	3	3	1	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|429216589|ref|YP_007174579.1|	-	1.6e-06	27.3	0.8	2.8e-06	26.5	0.5	1.4	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Ribosomal_S27e	PF01667.12	gi|429216589|ref|YP_007174579.1|	-	0.00029	20.3	0.2	0.00053	19.4	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-ribbon_3	PF13248.1	gi|429216589|ref|YP_007174579.1|	-	0.00086	18.4	2.9	0.0024	17.0	2.0	1.7	1	1	0	1	1	1	1	zinc-ribbon	domain
DASH_Spc34	PF08657.5	gi|429216589|ref|YP_007174579.1|	-	0.0036	16.9	1.5	0.0069	16.0	1.1	1.5	1	1	0	1	1	1	1	DASH	complex	subunit	Spc34
Lar_restr_allev	PF14354.1	gi|429216589|ref|YP_007174579.1|	-	0.0055	16.9	0.1	0.011	16.0	0.0	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zinc_ribbon_2	PF13240.1	gi|429216589|ref|YP_007174579.1|	-	0.013	14.9	2.1	1.9	8.0	0.3	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
RRN7	PF11781.3	gi|429216589|ref|YP_007174579.1|	-	0.019	14.4	0.1	0.028	13.9	0.1	1.3	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DZR	PF12773.2	gi|429216589|ref|YP_007174579.1|	-	0.021	14.6	0.2	0.036	13.8	0.1	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|429216589|ref|YP_007174579.1|	-	0.026	14.1	0.3	0.056	13.1	0.2	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|429216589|ref|YP_007174579.1|	-	0.032	14.0	1.0	0.072	12.9	0.7	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
SRCR_2	PF15494.1	gi|429216589|ref|YP_007174579.1|	-	0.076	13.2	0.4	0.43	10.8	0.1	2.1	2	0	0	2	2	2	0	Scavenger	receptor	cysteine-rich	domain
Elf1	PF05129.8	gi|429216589|ref|YP_007174579.1|	-	0.089	12.4	0.2	0.26	11.0	0.1	1.8	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DUF1992	PF09350.5	gi|429216589|ref|YP_007174579.1|	-	0.091	12.6	0.2	0.21	11.4	0.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1992)
Prim_Zn_Ribbon	PF08273.7	gi|429216589|ref|YP_007174579.1|	-	0.15	12.1	0.4	0.4	10.7	0.3	1.7	1	0	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
Cys_rich_CPXG	PF14255.1	gi|429216589|ref|YP_007174579.1|	-	0.29	10.9	2.0	2	8.3	0.2	2.4	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
TFIIS_C	PF01096.13	gi|429216589|ref|YP_007174579.1|	-	0.42	10.2	2.6	7.6	6.2	1.8	2.2	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
Zn_ribbon_recom	PF13408.1	gi|429216589|ref|YP_007174579.1|	-	0.68	10.2	7.6	0.36	11.1	0.1	2.9	3	1	0	3	3	2	0	Recombinase	zinc	beta	ribbon	domain
ArfGap	PF01412.13	gi|429216589|ref|YP_007174579.1|	-	0.68	9.7	4.9	0.31	10.8	1.8	2.0	2	1	0	2	2	2	0	Putative	GTPase	activating	protein	for	Arf
MMR_HSR1	PF01926.18	gi|429216590|ref|YP_007174580.1|	-	6.5e-22	77.6	5.6	2.9e-21	75.6	1.1	2.5	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
NOG1	PF06858.9	gi|429216590|ref|YP_007174580.1|	-	1.8e-18	66.1	2.6	3.4e-17	62.0	1.3	3.1	3	0	0	3	3	3	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.13	gi|429216590|ref|YP_007174580.1|	-	1.4e-13	50.4	2.6	2.6e-13	49.5	1.8	1.4	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|429216590|ref|YP_007174580.1|	-	2e-08	33.9	0.8	1.7e-06	27.6	0.6	2.5	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
Gtr1_RagA	PF04670.7	gi|429216590|ref|YP_007174580.1|	-	5.5e-08	32.2	3.0	7.9e-08	31.7	0.6	2.2	3	0	0	3	3	3	1	Gtr1/RagA	G	protein	conserved	region
AIG1	PF04548.11	gi|429216590|ref|YP_007174580.1|	-	1.1e-06	27.9	1.2	1.1e-06	27.9	0.8	2.0	3	0	0	3	3	3	1	AIG1	family
Miro	PF08477.8	gi|429216590|ref|YP_007174580.1|	-	2.3e-06	28.0	0.4	1e-05	26.0	0.1	2.0	2	0	0	2	2	2	1	Miro-like	protein
PduV-EutP	PF10662.4	gi|429216590|ref|YP_007174580.1|	-	0.00041	19.8	3.0	0.00051	19.5	0.3	2.4	2	1	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
SRPRB	PF09439.5	gi|429216590|ref|YP_007174580.1|	-	0.00072	18.8	0.8	0.00072	18.8	0.5	2.3	3	0	0	3	3	3	1	Signal	recognition	particle	receptor	beta	subunit
AAA_22	PF13401.1	gi|429216590|ref|YP_007174580.1|	-	0.0075	16.4	1.0	0.036	14.2	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
Dynamin_N	PF00350.18	gi|429216590|ref|YP_007174580.1|	-	0.0076	16.0	5.0	0.34	10.7	0.2	3.3	2	1	1	3	3	3	1	Dynamin	family
PPV_E1_C	PF00519.12	gi|429216590|ref|YP_007174580.1|	-	0.0096	14.5	0.0	0.015	13.9	0.0	1.2	1	0	0	1	1	1	1	Papillomavirus	helicase
AAA_29	PF13555.1	gi|429216590|ref|YP_007174580.1|	-	0.024	14.1	0.0	0.055	13.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
cobW	PF02492.14	gi|429216590|ref|YP_007174580.1|	-	0.031	13.7	2.6	2.4	7.5	0.7	2.6	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|429216590|ref|YP_007174580.1|	-	0.045	13.6	0.0	0.045	13.6	0.0	3.0	2	1	1	3	3	3	0	AAA	domain
DUF258	PF03193.11	gi|429216590|ref|YP_007174580.1|	-	0.059	12.5	0.1	0.5	9.5	0.1	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|429216590|ref|YP_007174580.1|	-	0.062	12.9	0.2	0.15	11.7	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Septin	PF00735.13	gi|429216590|ref|YP_007174580.1|	-	0.066	12.2	15.9	1.1	8.2	3.9	3.2	2	1	0	3	3	3	0	Septin
AAA_25	PF13481.1	gi|429216590|ref|YP_007174580.1|	-	0.082	12.3	0.0	0.21	10.9	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|429216590|ref|YP_007174580.1|	-	0.083	13.1	0.1	0.19	12.0	0.0	1.8	2	0	0	2	2	1	0	ABC	transporter
Zeta_toxin	PF06414.7	gi|429216590|ref|YP_007174580.1|	-	0.097	11.7	0.0	0.27	10.2	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
ATP_bind_1	PF03029.12	gi|429216590|ref|YP_007174580.1|	-	0.12	11.9	0.9	14	5.1	0.0	2.5	1	1	1	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Guanylate_kin	PF00625.16	gi|429216590|ref|YP_007174580.1|	-	0.22	10.9	4.2	1.7	8.0	0.0	3.0	2	1	0	3	3	3	0	Guanylate	kinase
AAA	PF00004.24	gi|429216590|ref|YP_007174580.1|	-	0.32	11.2	4.1	1.5	9.0	1.5	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|429216590|ref|YP_007174580.1|	-	0.36	11.6	2.8	0.54	11.0	0.4	2.5	2	1	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|429216590|ref|YP_007174580.1|	-	0.36	11.1	6.7	0.13	12.6	0.4	3.1	2	2	0	2	2	2	0	AAA	domain
ELFV_dehydrog	PF00208.16	gi|429216591|ref|YP_007174581.1|	-	1.3e-67	227.9	2.7	1.6e-67	227.6	1.9	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|429216591|ref|YP_007174581.1|	-	4e-50	168.7	0.0	6.9e-50	168.0	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|429216591|ref|YP_007174581.1|	-	5.3e-05	22.4	0.1	0.0001	21.5	0.1	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.16	gi|429216591|ref|YP_007174581.1|	-	0.0011	18.8	0.7	0.0031	17.3	0.5	1.6	1	1	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|429216591|ref|YP_007174581.1|	-	0.005	17.0	0.0	0.011	15.9	0.0	1.6	1	0	0	1	1	1	1	Putative	NAD(P)-binding
Bac_GDH	PF05088.7	gi|429216591|ref|YP_007174581.1|	-	0.019	12.4	0.0	0.026	11.9	0.0	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|429216591|ref|YP_007174581.1|	-	0.056	13.0	1.3	0.12	11.9	0.9	1.6	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
DrsE	PF02635.10	gi|429216592|ref|YP_007174582.1|	-	5e-16	58.8	0.0	5.6e-16	58.7	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|429216592|ref|YP_007174582.1|	-	0.06	13.1	0.0	0.069	12.9	0.0	1.2	1	0	0	1	1	1	0	DsrE/DsrF/DrsH-like	family
Peptidase_M24	PF00557.19	gi|429216593|ref|YP_007174583.1|	-	6.7e-53	179.3	0.0	8.2e-53	179.0	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|429216593|ref|YP_007174583.1|	-	9.1e-08	32.6	0.0	1.9e-07	31.6	0.0	1.6	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
PG_binding_4	PF12229.3	gi|429216593|ref|YP_007174583.1|	-	0.17	12.0	2.6	0.28	11.4	1.1	1.9	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
Ribosomal_L37e	PF01907.14	gi|429216594|ref|YP_007174584.1|	-	3.8e-25	87.4	9.6	4.3e-25	87.2	6.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|429216594|ref|YP_007174584.1|	-	0.0037	17.0	0.4	0.0046	16.7	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RING_5	PF14634.1	gi|429216594|ref|YP_007174584.1|	-	0.039	13.6	1.1	0.054	13.2	0.7	1.2	1	0	0	1	1	1	0	zinc-RING	finger	domain
zf-ribbon_3	PF13248.1	gi|429216594|ref|YP_007174584.1|	-	2.5	7.4	5.1	10	5.4	3.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
Ribosomal_L32p	PF01783.18	gi|429216594|ref|YP_007174584.1|	-	3.5	7.8	5.9	3.8	7.7	2.7	1.9	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
DUF2688	PF10892.3	gi|429216594|ref|YP_007174584.1|	-	4	7.1	5.2	6.1	6.5	3.3	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2688)
LSM	PF01423.17	gi|429216595|ref|YP_007174585.1|	-	2.9e-19	68.3	0.0	3.4e-19	68.1	0.0	1.0	1	0	0	1	1	1	1	LSM	domain
PUA	PF01472.15	gi|429216596|ref|YP_007174586.1|	-	1.2e-17	63.4	0.2	2.3e-17	62.4	0.1	1.5	1	0	0	1	1	1	1	PUA	domain
DUF1947	PF09183.5	gi|429216596|ref|YP_007174586.1|	-	2.7e-07	30.2	0.2	5.2e-07	29.3	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
MRL1	PF13003.2	gi|429216596|ref|YP_007174586.1|	-	0.0072	16.1	0.1	0.012	15.3	0.0	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L1
DUF1233	PF06806.7	gi|429216596|ref|YP_007174586.1|	-	0.086	12.4	0.1	6.4	6.4	0.0	2.6	3	0	0	3	3	3	0	Putative	excisionase	(DUF1233)
Rieske	PF00355.21	gi|429216598|ref|YP_007174588.1|	-	2.3e-12	46.3	0.0	2.6e-12	46.1	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|429216598|ref|YP_007174588.1|	-	1.7e-08	34.0	0.0	2.2e-08	33.7	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Radical_SAM	PF04055.16	gi|429216599|ref|YP_007174589.1|	-	9.3e-20	71.4	0.1	7.7e-19	68.4	0.0	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|429216599|ref|YP_007174589.1|	-	0.0023	18.0	0.2	0.0074	16.4	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
B12-binding	PF02310.14	gi|429216599|ref|YP_007174589.1|	-	0.0071	16.2	0.0	0.022	14.6	0.0	1.8	2	0	0	2	2	2	1	B12	binding	domain
Fer4_14	PF13394.1	gi|429216599|ref|YP_007174589.1|	-	0.019	14.9	0.1	0.22	11.5	0.0	2.4	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
RseC_MucC	PF04246.7	gi|429216601|ref|YP_007174591.1|	-	5.6	6.5	6.7	1.2	8.7	0.7	2.1	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
ALAD	PF00490.16	gi|429216602|ref|YP_007174592.1|	-	1.2e-130	435.1	0.0	1.3e-130	435.0	0.0	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
GlutR_N	PF05201.10	gi|429216603|ref|YP_007174593.1|	-	6.5e-33	113.4	0.1	2.8e-32	111.3	0.0	2.0	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|429216603|ref|YP_007174593.1|	-	7.6e-18	64.9	0.6	1.8e-17	63.6	0.4	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_dimer	PF00745.15	gi|429216603|ref|YP_007174593.1|	-	1.3e-08	34.6	1.8	3.3e-08	33.3	1.2	1.7	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.12	gi|429216603|ref|YP_007174593.1|	-	1.5e-06	28.5	0.1	3.2e-06	27.4	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Saccharop_dh	PF03435.13	gi|429216603|ref|YP_007174593.1|	-	0.001	18.1	0.0	0.0017	17.4	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
NAD_binding_2	PF03446.10	gi|429216603|ref|YP_007174593.1|	-	0.0019	18.0	0.1	0.0036	17.1	0.1	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
OCD_Mu_crystall	PF02423.10	gi|429216603|ref|YP_007174593.1|	-	0.0056	15.4	0.0	0.0089	14.8	0.0	1.2	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
DapB_N	PF01113.15	gi|429216603|ref|YP_007174593.1|	-	0.046	13.6	0.0	0.12	12.2	0.0	1.9	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
HrcA	PF01628.16	gi|429216603|ref|YP_007174593.1|	-	0.12	11.9	1.8	0.26	10.8	0.5	2.1	2	0	0	2	2	2	0	HrcA	protein	C	terminal	domain
SYCE1	PF15233.1	gi|429216603|ref|YP_007174593.1|	-	0.99	9.3	6.3	0.51	10.2	2.6	1.8	2	0	0	2	2	2	0	Synaptonemal	complex	central	element	protein	1
SecY	PF00344.15	gi|429216604|ref|YP_007174594.1|	-	1.4e-76	257.6	27.1	2e-76	257.1	18.8	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|429216604|ref|YP_007174594.1|	-	2.3e-08	33.3	0.9	8.1e-08	31.6	0.6	2.1	1	0	0	1	1	1	1	Plug	domain	of	Sec61p
AAA_18	PF13238.1	gi|429216605|ref|YP_007174595.1|	-	4.7e-12	46.3	0.3	7.9e-12	45.6	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|429216605|ref|YP_007174595.1|	-	4.7e-09	37.1	0.1	7.3e-09	36.4	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|429216605|ref|YP_007174595.1|	-	5.5e-05	23.1	0.1	0.00012	22.1	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
SRP54	PF00448.17	gi|429216605|ref|YP_007174595.1|	-	0.00016	21.2	0.1	0.00025	20.5	0.1	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.12	gi|429216605|ref|YP_007174595.1|	-	0.00022	20.6	2.3	0.0015	17.8	1.5	2.3	1	1	0	1	1	1	1	Thymidylate	kinase
DnaB_C	PF03796.10	gi|429216605|ref|YP_007174595.1|	-	0.00022	20.1	0.2	0.00022	20.1	0.1	1.5	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA_30	PF13604.1	gi|429216605|ref|YP_007174595.1|	-	0.00024	20.7	0.0	0.00047	19.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
CPT	PF07931.7	gi|429216605|ref|YP_007174595.1|	-	0.0003	20.4	0.0	0.00033	20.3	0.0	1.2	1	0	0	1	1	1	1	Chloramphenicol	phosphotransferase-like	protein
NTPase_1	PF03266.10	gi|429216605|ref|YP_007174595.1|	-	0.00032	20.4	1.3	0.00047	19.9	0.3	1.7	2	0	0	2	2	1	1	NTPase
AAA_16	PF13191.1	gi|429216605|ref|YP_007174595.1|	-	0.00042	20.3	0.1	0.00046	20.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
KTI12	PF08433.5	gi|429216605|ref|YP_007174595.1|	-	0.00046	19.4	0.2	0.0009	18.5	0.1	1.6	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_14	PF13173.1	gi|429216605|ref|YP_007174595.1|	-	0.00061	19.6	3.3	0.0077	16.1	2.2	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|429216605|ref|YP_007174595.1|	-	0.00063	19.4	0.1	0.0019	17.9	0.0	1.8	2	0	0	2	2	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|429216605|ref|YP_007174595.1|	-	0.0007	19.7	0.4	0.0015	18.7	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|429216605|ref|YP_007174595.1|	-	0.00082	19.0	0.0	0.0012	18.5	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
DUF2075	PF09848.4	gi|429216605|ref|YP_007174595.1|	-	0.001	18.1	0.1	0.0018	17.3	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.24	gi|429216605|ref|YP_007174595.1|	-	0.0012	19.0	2.3	0.012	15.8	1.5	2.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
6PF2K	PF01591.13	gi|429216605|ref|YP_007174595.1|	-	0.0013	17.8	0.8	0.0022	17.1	0.6	1.5	1	1	0	1	1	1	1	6-phosphofructo-2-kinase
ArgK	PF03308.11	gi|429216605|ref|YP_007174595.1|	-	0.0026	16.5	0.1	0.0057	15.4	0.1	1.5	1	0	0	1	1	1	1	ArgK	protein
ATP_bind_1	PF03029.12	gi|429216605|ref|YP_007174595.1|	-	0.0045	16.5	3.2	0.0073	15.8	0.3	2.3	1	1	1	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
DAP3	PF10236.4	gi|429216605|ref|YP_007174595.1|	-	0.0053	15.7	0.1	0.01	14.8	0.0	1.4	1	0	0	1	1	1	1	Mitochondrial	ribosomal	death-associated	protein	3
cobW	PF02492.14	gi|429216605|ref|YP_007174595.1|	-	0.0053	16.2	1.7	0.014	14.8	1.2	2.0	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|429216605|ref|YP_007174595.1|	-	0.0061	16.4	0.2	0.013	15.3	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|429216605|ref|YP_007174595.1|	-	0.0075	15.3	0.7	0.017	14.1	0.0	1.9	2	1	0	2	2	2	1	Zeta	toxin
MMR_HSR1	PF01926.18	gi|429216605|ref|YP_007174595.1|	-	0.009	15.9	1.3	0.02	14.8	0.9	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Viral_helicase1	PF01443.13	gi|429216605|ref|YP_007174595.1|	-	0.01	15.3	0.4	0.02	14.4	0.3	1.6	1	1	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
APS_kinase	PF01583.15	gi|429216605|ref|YP_007174595.1|	-	0.02	14.5	0.5	0.096	12.3	0.0	2.0	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Arch_ATPase	PF01637.13	gi|429216605|ref|YP_007174595.1|	-	0.028	14.1	3.8	0.049	13.3	0.2	2.1	2	0	0	2	2	2	0	Archaeal	ATPase
DUF258	PF03193.11	gi|429216605|ref|YP_007174595.1|	-	0.031	13.4	0.3	0.053	12.7	0.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|429216605|ref|YP_007174595.1|	-	0.051	13.2	3.1	0.052	13.2	0.7	2.2	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
T2SE	PF00437.15	gi|429216605|ref|YP_007174595.1|	-	0.059	12.2	1.6	0.14	11.0	0.1	2.0	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|429216605|ref|YP_007174595.1|	-	0.068	13.4	0.9	0.13	12.5	0.6	1.8	1	1	0	1	1	1	0	ABC	transporter
AAA_5	PF07728.9	gi|429216605|ref|YP_007174595.1|	-	0.094	12.4	0.2	0.15	11.7	0.1	1.5	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Nop10p	PF04135.7	gi|429216606|ref|YP_007174596.1|	-	9.3e-24	82.9	4.4	9.9e-24	82.8	3.1	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.6	gi|429216606|ref|YP_007174596.1|	-	0.0098	15.7	1.6	0.013	15.3	1.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
zf-CCHC_4	PF14392.1	gi|429216606|ref|YP_007174596.1|	-	0.059	13.0	0.1	0.059	13.0	0.1	1.6	2	0	0	2	2	2	0	Zinc	knuckle
A2L_zn_ribbon	PF08792.5	gi|429216606|ref|YP_007174596.1|	-	0.062	12.7	2.1	2.2	7.8	0.0	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-IS66	PF13005.2	gi|429216606|ref|YP_007174596.1|	-	0.11	12.5	0.1	0.11	12.5	0.1	1.8	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
DZR	PF12773.2	gi|429216606|ref|YP_007174596.1|	-	0.15	11.8	1.7	0.28	11.0	1.1	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Fer4	PF00037.22	gi|429216606|ref|YP_007174596.1|	-	0.22	11.1	1.1	16	5.2	0.1	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
zf-ribbon_3	PF13248.1	gi|429216606|ref|YP_007174596.1|	-	0.86	8.8	4.0	2.4	7.4	2.8	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|429216606|ref|YP_007174596.1|	-	0.91	9.5	3.9	0.5	10.3	1.4	1.6	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Zn_ribbon_recom	PF13408.1	gi|429216606|ref|YP_007174596.1|	-	2.5	8.4	6.7	0.3	11.3	1.4	1.7	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
EIF_2_alpha	PF07541.7	gi|429216607|ref|YP_007174597.1|	-	4.9e-26	90.6	0.6	1.2e-25	89.4	0.1	1.9	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|429216607|ref|YP_007174597.1|	-	6.4e-14	51.7	0.6	6.4e-14	51.7	0.4	1.8	2	0	0	2	2	2	1	S1	RNA	binding	domain
AAA_11	PF13086.1	gi|429216607|ref|YP_007174597.1|	-	1.2	8.6	3.4	2.8	7.4	2.4	1.5	1	1	0	1	1	1	0	AAA	domain
HTH_7	PF02796.10	gi|429216608|ref|YP_007174598.1|	-	0.024	14.5	0.1	0.059	13.2	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_3	PF01381.17	gi|429216608|ref|YP_007174598.1|	-	0.11	12.3	0.0	0.26	11.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix
RibD_C	PF01872.12	gi|429216609|ref|YP_007174599.1|	-	1e-45	155.8	0.0	1.1e-45	155.6	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
Radical_SAM	PF04055.16	gi|429216610|ref|YP_007174600.1|	-	1e-21	77.8	1.2	8.7e-20	71.5	0.0	2.4	2	0	0	2	2	2	2	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|429216610|ref|YP_007174600.1|	-	6.5e-10	39.0	0.5	4.1e-09	36.4	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|429216610|ref|YP_007174600.1|	-	1.2e-07	31.9	1.3	2.5e-07	30.8	0.0	2.1	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Endonuc_subdom	PF09062.5	gi|429216611|ref|YP_007174601.1|	-	0.016	15.9	0.2	0.019	15.6	0.1	1.1	1	0	0	1	1	1	0	PI-PfuI	Endonuclease	subdomain
Glycos_transf_2	PF00535.21	gi|429216612|ref|YP_007174602.1|	-	6.4e-35	120.3	0.5	1e-34	119.6	0.4	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GtrA	PF04138.9	gi|429216612|ref|YP_007174602.1|	-	1.3e-25	89.5	6.9	5e-25	87.7	3.5	2.1	2	0	0	2	2	2	1	GtrA-like	protein
Glyco_tranf_2_3	PF13641.1	gi|429216612|ref|YP_007174602.1|	-	8.2e-12	45.4	0.0	1.2e-11	44.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|429216612|ref|YP_007174602.1|	-	1.1e-10	41.1	0.3	1.3e-10	40.8	0.2	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
dTMP_synthase	PF02593.9	gi|429216612|ref|YP_007174602.1|	-	0.00025	20.4	1.3	0.00036	19.9	0.7	1.4	1	1	0	1	1	1	1	Thymidylate	synthase
DUF2606	PF10794.4	gi|429216612|ref|YP_007174602.1|	-	0.0033	16.8	0.9	0.0062	15.9	0.7	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2606)
UMPH-1	PF05822.7	gi|429216612|ref|YP_007174602.1|	-	0.028	13.7	0.3	0.048	12.9	0.2	1.3	1	0	0	1	1	1	0	Pyrimidine	5'-nucleotidase	(UMPH-1)
CitMHS	PF03600.11	gi|429216613|ref|YP_007174603.1|	-	5.3e-27	94.3	37.3	5.3e-27	94.3	25.8	2.0	1	1	1	2	2	2	2	Citrate	transporter
Na_sulph_symp	PF00939.14	gi|429216613|ref|YP_007174603.1|	-	8.8e-05	21.5	21.8	8.8e-05	21.5	15.1	2.2	2	0	0	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
DUF1646	PF07854.7	gi|429216613|ref|YP_007174603.1|	-	0.00017	20.8	39.3	0.0014	17.8	4.6	3.2	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF1646)
DUF1160	PF06648.6	gi|429216614|ref|YP_007174604.1|	-	2.2	8.0	8.9	1.1	9.0	0.4	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1160)
DEAD	PF00270.24	gi|429216615|ref|YP_007174605.1|	-	2.4e-33	114.9	0.0	1e-32	112.9	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|429216615|ref|YP_007174605.1|	-	1.1e-18	67.6	0.0	1e-17	64.4	0.0	2.4	1	1	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|429216615|ref|YP_007174605.1|	-	1.9e-15	56.4	0.0	2.2e-12	46.6	0.1	2.5	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|429216615|ref|YP_007174605.1|	-	2.5e-07	30.7	0.0	9.9e-07	28.7	0.0	2.1	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|429216615|ref|YP_007174605.1|	-	0.0046	15.7	0.0	0.0076	15.0	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
HTH_Crp_2	PF13545.1	gi|429216615|ref|YP_007174605.1|	-	0.011	15.4	0.1	3.1	7.6	0.0	3.0	3	0	0	3	3	3	0	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|429216615|ref|YP_007174605.1|	-	0.014	15.0	0.0	0.033	13.8	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
GerE	PF00196.14	gi|429216615|ref|YP_007174605.1|	-	0.026	13.8	0.4	0.069	12.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_40	PF14493.1	gi|429216615|ref|YP_007174605.1|	-	0.044	13.9	3.3	0.071	13.3	0.0	3.1	3	1	0	3	3	2	0	Helix-turn-helix	domain
AAA_11	PF13086.1	gi|429216615|ref|YP_007174605.1|	-	0.044	13.3	0.2	0.36	10.3	0.0	2.4	2	1	0	3	3	3	0	AAA	domain
Glyoxalase	PF00903.20	gi|429216615|ref|YP_007174605.1|	-	0.14	12.1	0.0	0.43	10.5	0.0	1.8	2	0	0	2	2	2	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
DUF2207	PF09972.4	gi|429216616|ref|YP_007174606.1|	-	0.2	10.1	5.0	0.26	9.8	3.5	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF4227	PF14004.1	gi|429216616|ref|YP_007174606.1|	-	1.4	8.8	4.6	1	9.2	1.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4227)
GHMP_kinases_N	PF00288.21	gi|429216617|ref|YP_007174607.1|	-	1.2e-05	25.2	0.0	2.4e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
RHH_1	PF01402.16	gi|429216618|ref|YP_007174608.1|	-	5e-09	35.6	0.7	6.4e-09	35.3	0.5	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_2	PF03693.9	gi|429216618|ref|YP_007174608.1|	-	0.00011	22.2	0.0	0.00011	22.2	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0156)
Ribosomal_L24e	PF01246.15	gi|429216619|ref|YP_007174609.1|	-	0.0075	16.1	0.5	0.015	15.1	0.3	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L24e
Cwf_Cwc_15	PF04889.7	gi|429216619|ref|YP_007174609.1|	-	0.023	14.4	0.6	0.024	14.3	0.4	1.2	1	0	0	1	1	1	0	Cwf15/Cwc15	cell	cycle	control	protein
zf-RING_2	PF13639.1	gi|429216619|ref|YP_007174609.1|	-	0.027	14.2	0.1	0.04	13.7	0.1	1.3	1	0	0	1	1	1	0	Ring	finger	domain
Prok-RING_1	PF14446.1	gi|429216619|ref|YP_007174609.1|	-	0.04	13.6	0.4	0.076	12.7	0.3	1.6	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-H2C2_2	PF13465.1	gi|429216619|ref|YP_007174609.1|	-	0.044	14.0	0.2	0.12	12.7	0.1	1.8	1	0	0	1	1	1	0	Zinc-finger	double	domain
DUF2175	PF09943.4	gi|429216619|ref|YP_007174609.1|	-	0.068	13.2	5.6	0.19	11.7	3.8	1.7	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
DUF2072	PF09845.4	gi|429216619|ref|YP_007174609.1|	-	0.12	12.2	1.8	0.19	11.6	1.2	1.4	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Zn-ribbon_8	PF09723.5	gi|429216619|ref|YP_007174609.1|	-	0.55	10.2	0.1	0.55	10.2	0.1	2.2	3	1	0	3	3	3	0	Zinc	ribbon	domain
MoaE	PF02391.12	gi|429216620|ref|YP_007174610.1|	-	4.4e-24	84.5	0.1	6.9e-24	83.9	0.1	1.3	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|429216620|ref|YP_007174610.1|	-	4.3e-06	27.0	0.3	1.8e-05	25.0	0.0	2.2	2	1	1	3	3	3	1	ThiS	family
Phage_FRD3	PF05798.6	gi|429216620|ref|YP_007174610.1|	-	0.43	10.9	3.7	0.65	10.3	0.4	2.5	3	0	0	3	3	3	0	Bacteriophage	FRD3	protein
Urm1	PF09138.6	gi|429216620|ref|YP_007174610.1|	-	2.6	8.2	6.5	21	5.2	4.4	2.7	1	1	0	1	1	1	0	Urm1	(Ubiquitin	related	modifier)
KOW	PF00467.24	gi|429216621|ref|YP_007174611.1|	-	0.0021	17.6	0.5	0.0036	16.9	0.3	1.4	1	0	0	1	1	1	1	KOW	motif
Phage_Mu_Gam	PF07352.7	gi|429216621|ref|YP_007174611.1|	-	0.0026	17.3	0.3	0.0037	16.8	0.2	1.2	1	0	0	1	1	1	1	Bacteriophage	Mu	Gam	like	protein
Tn7_Tnp_TnsA_N	PF08722.6	gi|429216621|ref|YP_007174611.1|	-	0.052	13.5	0.1	0.063	13.2	0.1	1.1	1	0	0	1	1	1	0	TnsA	endonuclease	N	terminal
ECH	PF00378.15	gi|429216622|ref|YP_007174612.1|	-	6e-48	163.0	0.0	7.4e-48	162.8	0.0	1.1	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
CLP_protease	PF00574.18	gi|429216622|ref|YP_007174612.1|	-	0.051	13.2	0.5	0.5	10.0	0.0	2.6	4	0	0	4	4	4	0	Clp	protease
TBP	PF00352.16	gi|429216623|ref|YP_007174613.1|	-	1.4e-67	223.0	0.3	3.8e-34	115.8	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|429216623|ref|YP_007174613.1|	-	8.1e-06	25.8	0.0	0.2	11.7	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
PCNA_N	PF00705.13	gi|429216624|ref|YP_007174614.1|	-	5.1e-18	64.7	0.9	2.4e-14	52.9	0.0	3.0	2	1	1	3	3	3	3	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|429216624|ref|YP_007174614.1|	-	2.3e-11	43.7	0.7	6.5e-11	42.2	0.1	2.0	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|429216624|ref|YP_007174614.1|	-	4.5e-07	28.9	1.2	0.00019	20.3	0.1	2.5	1	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|429216624|ref|YP_007174614.1|	-	4.4e-05	22.7	0.2	0.00021	20.5	0.1	1.8	1	1	0	1	1	1	1	Rad9
Baculo_PP31	PF05311.6	gi|429216624|ref|YP_007174614.1|	-	0.06	12.6	0.2	0.091	12.0	0.1	1.2	1	0	0	1	1	1	0	Baculovirus	33KDa	late	protein	(PP31)
DUF1900	PF08954.6	gi|429216624|ref|YP_007174614.1|	-	0.095	12.2	0.1	1.1	8.8	0.0	2.4	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1900)
DNA_primase_S	PF01896.14	gi|429216625|ref|YP_007174615.1|	-	3.2e-11	43.2	0.0	5.9e-11	42.3	0.0	1.5	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
Ribosomal_L44	PF00935.14	gi|429216627|ref|YP_007174617.1|	-	2e-28	98.1	7.2	2e-28	98.1	5.0	1.5	2	0	0	2	2	2	1	Ribosomal	protein	L44
Elf1	PF05129.8	gi|429216627|ref|YP_007174617.1|	-	0.0035	17.0	1.5	0.21	11.2	0.2	2.2	2	0	0	2	2	2	1	Transcription	elongation	factor	Elf1	like
RNA_POL_M_15KD	PF02150.11	gi|429216627|ref|YP_007174617.1|	-	0.0063	16.1	0.2	3.6	7.3	0.0	2.3	2	0	0	2	2	2	2	RNA	polymerases	M/15	Kd	subunit
zf-ISL3	PF14690.1	gi|429216627|ref|YP_007174617.1|	-	0.0066	16.4	1.2	1.6	8.8	0.2	2.6	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|429216627|ref|YP_007174617.1|	-	0.021	14.2	4.1	1.7	8.2	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_L33	PF00471.15	gi|429216627|ref|YP_007174617.1|	-	0.026	14.7	1.3	0.026	14.7	0.9	2.7	2	1	0	2	2	2	0	Ribosomal	protein	L33
zf-ribbon_3	PF13248.1	gi|429216627|ref|YP_007174617.1|	-	0.028	13.6	1.7	3.7	6.8	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
WCCH	PF03716.9	gi|429216627|ref|YP_007174617.1|	-	0.039	13.4	0.3	0.07	12.5	0.2	1.4	1	0	0	1	1	1	0	WCCH	motif
NOB1_Zn_bind	PF08772.6	gi|429216627|ref|YP_007174617.1|	-	0.067	13.0	1.7	1.2	8.9	0.2	2.2	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
T4_baseplate	PF12322.3	gi|429216627|ref|YP_007174617.1|	-	0.068	12.4	0.4	3.1	6.9	0.0	2.0	2	0	0	2	2	2	0	T4	bacteriophage	base	plate	protein
zinc_ribbon_5	PF13719.1	gi|429216627|ref|YP_007174617.1|	-	0.07	12.7	2.6	1.6	8.3	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Joubert	PF15392.1	gi|429216627|ref|YP_007174617.1|	-	0.079	12.1	0.3	0.076	12.2	0.2	1.0	1	0	0	1	1	1	0	Joubert	syndrome-associated
DUF2082	PF09855.4	gi|429216627|ref|YP_007174617.1|	-	0.099	12.5	1.7	5.4	6.9	0.1	2.3	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Lar_restr_allev	PF14354.1	gi|429216627|ref|YP_007174617.1|	-	0.1	12.8	0.3	0.81	10.0	0.2	2.0	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Yippee-Mis18	PF03226.9	gi|429216627|ref|YP_007174617.1|	-	0.11	12.6	0.3	0.14	12.2	0.2	1.1	1	0	0	1	1	1	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
zinc_ribbon_4	PF13717.1	gi|429216627|ref|YP_007174617.1|	-	0.11	12.1	2.8	2.1	8.0	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|429216627|ref|YP_007174617.1|	-	0.16	11.5	3.0	3.4	7.3	0.2	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DUF2296	PF10058.4	gi|429216627|ref|YP_007174617.1|	-	0.47	10.2	2.4	3.8	7.3	0.2	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DZR	PF12773.2	gi|429216627|ref|YP_007174617.1|	-	0.58	10.0	4.1	6.7	6.6	2.9	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
Cys_rich_KTR	PF14205.1	gi|429216627|ref|YP_007174617.1|	-	0.96	8.9	3.8	3.8	7.0	0.2	2.3	2	0	0	2	2	2	0	Cysteine-rich	KTR
IBR	PF01485.16	gi|429216627|ref|YP_007174617.1|	-	1.1	9.1	5.0	2.6	7.9	3.5	1.6	1	1	0	1	1	1	0	IBR	domain
Tnp_zf-ribbon_2	PF13842.1	gi|429216627|ref|YP_007174617.1|	-	3.4	8.1	8.5	1.8	9.0	0.2	2.5	2	1	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
zf-H2C2_2	PF13465.1	gi|429216627|ref|YP_007174617.1|	-	3.5	8.0	6.0	14	6.2	0.2	2.5	2	0	0	2	2	2	0	Zinc-finger	double	domain
Ribosomal_S27e	PF01667.12	gi|429216628|ref|YP_007174618.1|	-	1.2e-18	66.3	0.4	1.3e-18	66.2	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.7	gi|429216628|ref|YP_007174618.1|	-	4e-05	22.8	0.2	5.5e-05	22.4	0.1	1.2	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|429216628|ref|YP_007174618.1|	-	0.00013	21.0	2.0	0.016	14.3	2.4	2.1	1	1	1	2	2	2	2	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|429216628|ref|YP_007174618.1|	-	0.001	18.7	1.2	0.32	10.7	0.0	2.2	2	0	0	2	2	2	2	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C4_Topoisom	PF01396.14	gi|429216628|ref|YP_007174618.1|	-	0.0012	18.3	1.2	0.038	13.4	0.0	2.1	1	1	1	2	2	2	1	Topoisomerase	DNA	binding	C4	zinc	finger
zinc_ribbon_2	PF13240.1	gi|429216628|ref|YP_007174618.1|	-	0.0012	18.2	10.1	0.0093	15.4	2.2	1.9	1	1	1	2	2	2	2	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|429216628|ref|YP_007174618.1|	-	0.0015	18.7	0.1	0.0019	18.4	0.1	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-ISL3	PF14690.1	gi|429216628|ref|YP_007174618.1|	-	0.0066	16.4	2.2	0.057	13.4	0.5	2.1	1	1	1	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_Tnp_IS91	PF14319.1	gi|429216628|ref|YP_007174618.1|	-	0.0073	15.7	0.3	0.0084	15.6	0.2	1.1	1	0	0	1	1	1	1	Transposase	zinc-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|429216628|ref|YP_007174618.1|	-	0.008	15.9	1.1	0.012	15.4	0.7	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
HypA	PF01155.14	gi|429216628|ref|YP_007174618.1|	-	0.02	14.5	0.0	0.023	14.3	0.0	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|429216628|ref|YP_007174618.1|	-	0.023	14.5	0.5	0.039	13.7	0.3	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF35_N	PF12172.3	gi|429216628|ref|YP_007174618.1|	-	0.024	14.5	0.3	2.1	8.3	0.0	2.3	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.6	gi|429216628|ref|YP_007174618.1|	-	0.042	13.5	0.5	0.064	12.9	0.3	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DNA_RNApol_7kD	PF03604.8	gi|429216628|ref|YP_007174618.1|	-	0.042	13.3	0.8	1.1	8.7	0.1	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_6	PF14599.1	gi|429216628|ref|YP_007174618.1|	-	0.051	13.3	0.1	0.064	13.0	0.0	1.1	1	0	0	1	1	1	0	Zinc-ribbon
TFIIS_C	PF01096.13	gi|429216628|ref|YP_007174618.1|	-	0.056	13.0	3.1	0.13	11.8	0.2	2.1	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-C2HC5	PF06221.8	gi|429216628|ref|YP_007174618.1|	-	0.062	13.0	0.5	0.094	12.4	0.3	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
zinc_ribbon_5	PF13719.1	gi|429216628|ref|YP_007174618.1|	-	0.066	12.8	2.4	0.33	10.5	0.1	2.3	2	1	1	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429216628|ref|YP_007174618.1|	-	0.1	12.2	2.4	0.5	10.1	0.1	2.3	2	1	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|429216628|ref|YP_007174618.1|	-	0.12	12.3	2.2	1.1	9.3	1.9	2.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
CpXC	PF14353.1	gi|429216628|ref|YP_007174618.1|	-	0.14	12.1	1.6	0.58	10.1	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
YhfH	PF14149.1	gi|429216628|ref|YP_007174618.1|	-	0.15	11.8	0.5	0.22	11.3	0.4	1.2	1	0	0	1	1	1	0	YhfH-like	protein
zf-NADH-PPase	PF09297.6	gi|429216628|ref|YP_007174618.1|	-	0.37	10.3	4.2	4.5	6.8	2.9	2.1	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF1610	PF07754.6	gi|429216628|ref|YP_007174618.1|	-	0.59	10.3	6.8	4.5	7.4	1.5	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
UPF0547	PF10571.4	gi|429216628|ref|YP_007174618.1|	-	5.1	6.8	7.2	0.83	9.4	1.2	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Thioredoxin	PF00085.15	gi|429216629|ref|YP_007174619.1|	-	1.3e-21	76.2	0.1	1.8e-21	75.7	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|429216629|ref|YP_007174619.1|	-	9.5e-07	29.0	0.0	2.2e-05	24.5	0.0	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|429216629|ref|YP_007174619.1|	-	3.4e-06	27.0	0.8	0.002	18.2	0.0	2.6	1	1	0	1	1	1	1	Thioredoxin-like
Thioredoxin_7	PF13899.1	gi|429216629|ref|YP_007174619.1|	-	0.00013	21.9	0.1	0.00019	21.3	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
DUF2847	PF11009.3	gi|429216629|ref|YP_007174619.1|	-	0.00036	20.0	0.2	0.00052	19.5	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2847)
Thioredoxin_9	PF14595.1	gi|429216629|ref|YP_007174619.1|	-	0.0012	18.4	0.0	0.0014	18.1	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_3	PF13192.1	gi|429216629|ref|YP_007174619.1|	-	0.0012	18.6	0.4	0.0036	17.0	0.0	1.9	1	1	1	2	2	2	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|429216629|ref|YP_007174619.1|	-	0.0024	17.5	0.8	0.023	14.3	0.1	2.0	1	1	0	2	2	2	1	AhpC/TSA	family
Thioredoxin_6	PF13848.1	gi|429216629|ref|YP_007174619.1|	-	0.012	15.4	1.3	0.041	13.6	0.6	1.8	1	1	1	2	2	2	0	Thioredoxin-like	domain
Redoxin	PF08534.5	gi|429216629|ref|YP_007174619.1|	-	0.029	13.9	1.5	0.29	10.6	0.2	2.1	1	1	1	2	2	2	0	Redoxin
HyaE	PF07449.6	gi|429216629|ref|YP_007174619.1|	-	0.069	13.0	0.0	0.16	11.8	0.0	1.7	2	0	0	2	2	2	0	Hydrogenase-1	expression	protein	HyaE
KRBA1	PF15287.1	gi|429216629|ref|YP_007174619.1|	-	0.071	12.4	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	KRBA1	family	repeat
Ribosomal_L15e	PF00827.12	gi|429216630|ref|YP_007174620.1|	-	7.5e-72	240.8	8.1	9.2e-72	240.5	5.6	1.1	1	0	0	1	1	1	1	Ribosomal	L15
DUF497	PF04365.8	gi|429216630|ref|YP_007174620.1|	-	0.1	12.5	0.8	0.26	11.2	0.5	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF497)
RNA_binding	PF01877.12	gi|429216631|ref|YP_007174621.1|	-	3.7e-33	114.0	2.8	4.5e-33	113.7	2.0	1.1	1	0	0	1	1	1	1	RNA	binding
PhoU	PF01895.14	gi|429216631|ref|YP_007174621.1|	-	0.58	10.6	4.5	0.63	10.5	1.6	2.2	2	1	0	2	2	2	0	PhoU	domain
RNase_P_p30	PF01876.11	gi|429216632|ref|YP_007174622.1|	-	7.6e-11	41.4	1.8	1.2e-10	40.8	1.3	1.3	1	0	0	1	1	1	1	RNase	P	subunit	p30
PAZ_siRNAbind	PF12212.3	gi|429216632|ref|YP_007174622.1|	-	0.031	13.9	1.7	11	5.7	0.2	3.3	2	1	0	2	2	2	0	Piwi/Argonaute/Zwille	siRNA-binding	domain
VPS11_C	PF12451.3	gi|429216632|ref|YP_007174622.1|	-	7.3	6.5	7.5	0.28	11.0	0.3	2.3	3	0	0	3	3	3	0	Vacuolar	protein	sorting	protein	11	C	terminal
Thy1	PF02511.10	gi|429216633|ref|YP_007174623.1|	-	7.8e-60	201.4	0.5	1.3e-59	200.7	0.4	1.3	1	1	0	1	1	1	1	Thymidylate	synthase	complementing	protein
DASH_Dad4	PF08650.5	gi|429216634|ref|YP_007174624.1|	-	0.0092	15.8	4.2	0.027	14.3	2.9	1.7	1	0	0	1	1	1	1	DASH	complex	subunit	Dad4
DUF3196	PF11428.3	gi|429216634|ref|YP_007174624.1|	-	0.012	14.9	4.0	0.033	13.4	2.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3196)
DUF1323	PF07037.6	gi|429216634|ref|YP_007174624.1|	-	0.053	13.6	0.0	0.087	12.9	0.0	1.3	1	0	0	1	1	1	0	Putative	transcription	regulator	(DUF1323)
BEN	PF10523.4	gi|429216634|ref|YP_007174624.1|	-	0.62	10.1	3.3	3	7.9	0.2	2.4	2	0	0	2	2	2	0	BEN	domain
eIF-6	PF01912.13	gi|429216635|ref|YP_007174625.1|	-	3.1e-70	235.3	4.0	3.6e-70	235.1	2.8	1.1	1	0	0	1	1	1	1	eIF-6	family
Ribosomal_L31e	PF01198.14	gi|429216636|ref|YP_007174626.1|	-	3.9e-19	68.1	0.3	5.7e-19	67.5	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L31e
Ribosomal_L39	PF00832.15	gi|429216637|ref|YP_007174627.1|	-	9.9e-19	66.5	6.3	1.2e-18	66.2	4.4	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
dsDNA_bind	PF01984.15	gi|429216638|ref|YP_007174628.1|	-	5.4e-24	84.2	8.9	6.6e-24	83.9	6.2	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
Radial_spoke_3	PF06098.6	gi|429216638|ref|YP_007174628.1|	-	0.0015	17.6	6.6	0.0016	17.4	4.6	1.1	1	0	0	1	1	1	1	Radial	spoke	protein	3
FYVE_2	PF02318.11	gi|429216638|ref|YP_007174628.1|	-	0.12	12.3	3.5	0.19	11.6	2.4	1.4	1	0	0	1	1	1	0	FYVE-type	zinc	finger
Macoilin	PF09726.4	gi|429216638|ref|YP_007174628.1|	-	0.14	10.4	2.6	0.13	10.5	1.8	1.1	1	0	0	1	1	1	0	Transmembrane	protein
FliG_M	PF14841.1	gi|429216638|ref|YP_007174628.1|	-	0.22	11.5	3.3	3.3	7.7	1.0	2.3	1	1	1	2	2	2	0	FliG	middle	domain
Sipho_Gp157	PF05565.6	gi|429216639|ref|YP_007174629.1|	-	0.044	13.3	1.3	0.056	13.0	0.9	1.4	1	1	0	1	1	1	0	Siphovirus	Gp157
QRPTase_C	PF01729.14	gi|429216640|ref|YP_007174630.1|	-	6.9e-22	77.7	0.0	9.3e-22	77.3	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|429216640|ref|YP_007174630.1|	-	0.013	15.2	0.0	0.024	14.4	0.0	1.4	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
KaiC	PF06745.8	gi|429216642|ref|YP_007174632.1|	-	8.2e-59	198.4	1.1	9.5e-59	198.2	0.8	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|429216642|ref|YP_007174632.1|	-	2.3e-12	46.7	0.0	3.9e-12	45.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|429216642|ref|YP_007174632.1|	-	2.3e-05	22.9	0.2	4.3e-05	22.0	0.1	1.4	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
Rad51	PF08423.6	gi|429216642|ref|YP_007174632.1|	-	7.3e-05	21.7	0.1	0.00012	21.0	0.0	1.5	1	1	0	1	1	1	1	Rad51
RecA	PF00154.16	gi|429216642|ref|YP_007174632.1|	-	0.00012	21.2	0.6	0.00019	20.5	0.0	1.6	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
IstB_IS21	PF01695.12	gi|429216642|ref|YP_007174632.1|	-	0.00013	21.4	0.0	0.00039	19.8	0.0	1.7	1	1	1	2	2	2	1	IstB-like	ATP	binding	protein
AAA_22	PF13401.1	gi|429216642|ref|YP_007174632.1|	-	0.00053	20.1	0.0	0.00099	19.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|429216642|ref|YP_007174632.1|	-	0.007	15.2	0.0	0.012	14.4	0.0	1.5	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
PhoH	PF02562.11	gi|429216642|ref|YP_007174632.1|	-	0.012	14.8	0.1	0.027	13.6	0.0	1.5	1	1	0	1	1	1	0	PhoH-like	protein
AAA_10	PF12846.2	gi|429216642|ref|YP_007174632.1|	-	0.013	14.9	0.0	0.099	12.0	0.0	1.9	1	1	1	2	2	2	0	AAA-like	domain
PAXNEB	PF05625.6	gi|429216642|ref|YP_007174632.1|	-	0.016	14.0	0.1	0.03	13.1	0.0	1.4	1	1	0	1	1	1	0	PAXNEB	protein
DUF2075	PF09848.4	gi|429216642|ref|YP_007174632.1|	-	0.016	14.1	0.1	0.04	12.8	0.0	1.6	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
MEDS	PF14417.1	gi|429216642|ref|YP_007174632.1|	-	0.021	13.8	0.1	0.03	13.3	0.0	1.2	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
T2SE	PF00437.15	gi|429216642|ref|YP_007174632.1|	-	0.024	13.5	0.3	0.072	11.9	0.0	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
DUF643	PF04867.7	gi|429216642|ref|YP_007174632.1|	-	0.027	14.8	3.8	4.8	7.6	0.1	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF643)
ATP-synt_ab	PF00006.20	gi|429216642|ref|YP_007174632.1|	-	0.052	13.0	0.0	0.058	12.8	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|429216642|ref|YP_007174632.1|	-	0.053	13.4	0.1	0.1	12.4	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|429216642|ref|YP_007174632.1|	-	0.077	12.4	0.0	0.12	11.8	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
ABC_tran	PF00005.22	gi|429216642|ref|YP_007174632.1|	-	0.12	12.7	0.1	0.32	11.2	0.1	1.7	1	1	0	1	1	1	0	ABC	transporter
AAA_19	PF13245.1	gi|429216642|ref|YP_007174632.1|	-	0.14	11.9	0.0	0.28	10.9	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Cys_Met_Meta_PP	PF01053.15	gi|429216643|ref|YP_007174633.1|	-	1.9e-107	358.9	0.0	2.2e-107	358.7	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Met_gamma_lyase	PF06838.6	gi|429216643|ref|YP_007174633.1|	-	0.00012	20.5	0.2	0.00045	18.6	0.2	1.8	1	1	0	1	1	1	1	Methionine	gamma-lyase
GDC-P	PF02347.11	gi|429216643|ref|YP_007174633.1|	-	0.00039	19.2	0.0	0.00065	18.5	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|429216643|ref|YP_007174633.1|	-	0.00056	18.7	0.0	0.00073	18.3	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Mga	PF05043.8	gi|429216643|ref|YP_007174633.1|	-	0.021	15.0	2.0	0.053	13.7	0.9	2.0	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
Metallophos_2	PF12850.2	gi|429216644|ref|YP_007174634.1|	-	5.6e-08	32.7	0.2	1.2e-07	31.7	0.2	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|429216644|ref|YP_007174634.1|	-	4.7e-07	29.3	0.2	4.6e-06	26.1	0.0	2.1	1	1	1	2	2	2	1	Calcineurin-like	phosphoesterase
PGM_PMM_I	PF02878.11	gi|429216645|ref|YP_007174635.1|	-	1.3e-37	128.3	0.1	8e-37	125.7	0.0	2.1	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|429216645|ref|YP_007174635.1|	-	4.8e-21	75.0	0.0	1.5e-20	73.4	0.0	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.15	gi|429216645|ref|YP_007174635.1|	-	1.6e-10	40.8	0.0	8.7e-10	38.4	0.0	2.1	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
PGM_PMM_III	PF02880.11	gi|429216645|ref|YP_007174635.1|	-	1.8e-07	31.2	0.0	3.1e-07	30.4	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
Peptidase_S41	PF03572.13	gi|429216645|ref|YP_007174635.1|	-	0.062	12.7	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	Peptidase	family	S41
Toprim_4	PF13662.1	gi|429216646|ref|YP_007174636.1|	-	0.11	12.4	0.1	0.44	10.5	0.0	2.1	1	1	1	2	2	2	0	Toprim	domain
TIR	PF01582.15	gi|429216646|ref|YP_007174636.1|	-	0.17	11.3	3.1	0.93	8.9	0.0	2.7	3	0	0	3	3	3	0	TIR	domain
Spt4	PF06093.8	gi|429216648|ref|YP_007174638.1|	-	3.8e-13	49.0	0.4	4.7e-13	48.8	0.3	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
zf-ribbon_3	PF13248.1	gi|429216648|ref|YP_007174638.1|	-	1.2e-06	27.5	3.4	1.8e-06	26.9	2.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429216648|ref|YP_007174638.1|	-	7e-06	25.3	4.5	1.2e-05	24.6	3.1	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|429216648|ref|YP_007174638.1|	-	1.7e-05	24.5	1.3	2.3e-05	24.1	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|429216648|ref|YP_007174638.1|	-	0.00012	21.6	6.2	0.00021	20.9	4.3	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-C4H2	PF10146.4	gi|429216648|ref|YP_007174638.1|	-	0.0015	18.6	4.6	0.0019	18.2	3.2	1.2	1	0	0	1	1	1	1	Zinc	finger-containing	protein
TF_Zn_Ribbon	PF08271.7	gi|429216648|ref|YP_007174638.1|	-	0.0016	17.6	3.3	0.035	13.4	0.3	2.3	1	1	1	2	2	2	1	TFIIB	zinc-binding
DUF35_N	PF12172.3	gi|429216648|ref|YP_007174638.1|	-	0.0021	17.9	0.1	0.0028	17.5	0.1	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Lar_restr_allev	PF14354.1	gi|429216648|ref|YP_007174638.1|	-	0.0086	16.3	2.1	0.051	13.8	0.0	2.2	1	1	1	2	2	2	1	Restriction	alleviation	protein	Lar
NRDD	PF13597.1	gi|429216648|ref|YP_007174638.1|	-	0.018	13.1	0.3	0.023	12.8	0.2	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
NOB1_Zn_bind	PF08772.6	gi|429216648|ref|YP_007174638.1|	-	0.046	13.5	1.0	0.089	12.6	0.7	1.5	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
RecR	PF02132.10	gi|429216648|ref|YP_007174638.1|	-	0.054	12.9	0.7	0.096	12.1	0.5	1.5	1	0	0	1	1	1	0	RecR	protein
zf-C3HC4_3	PF13920.1	gi|429216648|ref|YP_007174638.1|	-	0.059	13.0	1.8	0.089	12.4	1.3	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.14	gi|429216648|ref|YP_007174638.1|	-	0.1	12.3	0.2	0.12	12.0	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-RanBP	PF00641.13	gi|429216648|ref|YP_007174638.1|	-	0.16	11.0	3.1	0.21	10.7	0.1	2.1	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
Prim_Zn_Ribbon	PF08273.7	gi|429216648|ref|YP_007174638.1|	-	0.23	11.5	1.2	2.3	8.3	0.1	2.2	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
ADK_lid	PF05191.9	gi|429216648|ref|YP_007174638.1|	-	0.26	10.9	3.4	4.7	6.9	2.4	2.2	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
RRN7	PF11781.3	gi|429216648|ref|YP_007174638.1|	-	0.32	10.5	2.9	0.91	9.0	0.1	2.1	1	1	1	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Prok-RING_1	PF14446.1	gi|429216648|ref|YP_007174638.1|	-	0.45	10.2	2.3	0.74	9.5	1.6	1.4	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Zn-ribbon_8	PF09723.5	gi|429216648|ref|YP_007174638.1|	-	0.59	10.1	3.3	22	5.1	0.2	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-tcix	PF14952.1	gi|429216648|ref|YP_007174638.1|	-	1.4	8.2	5.2	12	5.3	0.5	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF3797	PF12677.2	gi|429216648|ref|YP_007174638.1|	-	1.4	8.5	5.3	1.2	8.8	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
YhfH	PF14149.1	gi|429216648|ref|YP_007174638.1|	-	1.6	8.5	4.8	17	5.3	3.2	2.2	1	1	1	2	2	2	0	YhfH-like	protein
DUF359	PF04019.7	gi|429216649|ref|YP_007174639.1|	-	6.6e-30	102.9	0.0	8.6e-30	102.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Orbi_VP1	PF05788.7	gi|429216649|ref|YP_007174639.1|	-	0.0045	14.2	0.0	0.0058	13.9	0.0	1.0	1	0	0	1	1	1	1	Orbivirus	RNA-dependent	RNA	polymerase	(VP1)
Sushi_2	PF09014.5	gi|429216649|ref|YP_007174639.1|	-	0.14	11.8	0.0	0.28	10.9	0.0	1.4	1	0	0	1	1	1	0	Beta-2-glycoprotein-1	fifth	domain
Ribosomal_L21p	PF00829.16	gi|429216650|ref|YP_007174640.1|	-	0.074	13.1	0.0	0.092	12.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	prokaryotic	L21	protein
DUF3073	PF11273.3	gi|429216650|ref|YP_007174640.1|	-	0.14	12.7	0.0	0.19	12.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3073)
Nudix_N_2	PF14803.1	gi|429216651|ref|YP_007174641.1|	-	0.0037	16.9	2.3	0.82	9.4	0.2	2.2	2	0	0	2	2	2	2	Nudix	N-terminal
zf-ribbon_3	PF13248.1	gi|429216651|ref|YP_007174641.1|	-	0.014	14.5	0.3	0.75	9.0	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
ADK_lid	PF05191.9	gi|429216651|ref|YP_007174641.1|	-	0.027	14.1	0.1	1.5	8.5	0.0	2.5	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-dskA_traR	PF01258.12	gi|429216651|ref|YP_007174641.1|	-	0.037	13.7	0.9	5	6.9	0.0	2.2	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Zn_ribbon_recom	PF13408.1	gi|429216651|ref|YP_007174641.1|	-	0.061	13.5	0.2	9.6	6.5	0.0	2.3	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429216651|ref|YP_007174641.1|	-	0.073	12.7	0.6	6.6	6.5	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|429216651|ref|YP_007174641.1|	-	0.074	12.7	0.8	0.19	11.4	0.5	1.7	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C3HC4_3	PF13920.1	gi|429216651|ref|YP_007174641.1|	-	0.077	12.6	0.1	0.16	11.6	0.1	1.5	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-C3HC	PF07967.8	gi|429216651|ref|YP_007174641.1|	-	0.078	12.7	0.0	1.4	8.6	0.0	2.1	2	0	0	2	2	2	0	C3HC	zinc	finger-like
zinc_ribbon_5	PF13719.1	gi|429216651|ref|YP_007174641.1|	-	0.086	12.4	0.6	6.9	6.3	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|429216651|ref|YP_007174641.1|	-	0.095	12.2	0.3	5.9	6.4	0.0	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DZR	PF12773.2	gi|429216651|ref|YP_007174641.1|	-	0.2	11.4	1.4	0.88	9.4	1.0	1.9	1	1	0	1	1	1	0	Double	zinc	ribbon
RIO1	PF01163.17	gi|429216652|ref|YP_007174642.1|	-	0.0012	18.2	0.0	0.0029	16.9	0.0	1.5	1	1	0	1	1	1	1	RIO1	family
Choline_kinase	PF01633.15	gi|429216652|ref|YP_007174642.1|	-	0.0037	16.8	0.0	0.006	16.1	0.0	1.4	1	0	0	1	1	1	1	Choline/ethanolamine	kinase
Pkinase_Tyr	PF07714.12	gi|429216652|ref|YP_007174642.1|	-	0.029	13.4	0.0	0.042	12.9	0.0	1.1	1	0	0	1	1	1	0	Protein	tyrosine	kinase
Imm39	PF15600.1	gi|429216652|ref|YP_007174642.1|	-	0.22	11.3	4.6	0.1	12.4	1.2	2.0	2	1	0	2	2	2	0	Immunity	protein	39
tRNA_NucTransf2	PF09249.6	gi|429216653|ref|YP_007174643.1|	-	7.7e-38	128.8	0.0	1.4e-37	128.0	0.0	1.5	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|429216653|ref|YP_007174643.1|	-	3.8e-08	33.5	0.2	1.3e-07	31.8	0.0	2.0	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
LigT_PEase	PF02834.11	gi|429216654|ref|YP_007174644.1|	-	1.7e-28	98.3	0.0	3.5e-14	52.5	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
AKAP7_NLS	PF10469.4	gi|429216654|ref|YP_007174644.1|	-	1.8e-15	57.2	0.5	3.5e-15	56.2	0.4	1.4	1	1	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
2_5_RNA_ligase2	PF13563.1	gi|429216654|ref|YP_007174644.1|	-	2.4e-10	40.3	0.0	3.2e-10	39.9	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
UbiA	PF01040.13	gi|429216655|ref|YP_007174645.1|	-	8.7e-36	123.4	23.1	1.1e-35	123.1	16.0	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF4293	PF14126.1	gi|429216655|ref|YP_007174645.1|	-	0.0093	15.8	2.7	0.0093	15.8	1.8	2.7	2	1	1	3	3	3	1	Domain	of	unknown	function	(DUF4293)
MadM	PF03818.8	gi|429216655|ref|YP_007174645.1|	-	0.054	13.0	0.4	0.054	13.0	0.2	3.2	3	1	1	4	4	4	0	Malonate/sodium	symporter	MadM	subunit
Pcc1	PF09341.5	gi|429216656|ref|YP_007174646.1|	-	2.7e-07	30.5	0.0	2.8e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Brix	PF04427.13	gi|429216657|ref|YP_007174647.1|	-	3.9e-11	42.9	0.5	8.8e-11	41.8	0.4	1.6	1	1	0	1	1	1	1	Brix	domain
Ribosomal_L37ae	PF01780.14	gi|429216658|ref|YP_007174648.1|	-	1.1e-29	102.1	2.2	1.1e-29	102.0	1.5	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|429216658|ref|YP_007174648.1|	-	0.00037	20.2	1.3	0.00054	19.7	0.9	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|429216658|ref|YP_007174648.1|	-	0.00063	19.3	0.7	0.00081	19.0	0.5	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
PhnA_Zn_Ribbon	PF08274.7	gi|429216658|ref|YP_007174648.1|	-	0.00069	19.3	0.3	0.0016	18.2	0.1	1.7	1	1	0	1	1	1	1	PhnA	Zinc-Ribbon
Elf1	PF05129.8	gi|429216658|ref|YP_007174648.1|	-	0.002	17.7	0.1	0.0024	17.5	0.0	1.2	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
TF_Zn_Ribbon	PF08271.7	gi|429216658|ref|YP_007174648.1|	-	0.0041	16.3	0.1	0.0065	15.7	0.0	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
DUF4379	PF14311.1	gi|429216658|ref|YP_007174648.1|	-	0.0042	16.8	4.7	0.017	14.9	0.8	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4379)
RRN7	PF11781.3	gi|429216658|ref|YP_007174648.1|	-	0.011	15.1	0.7	0.019	14.4	0.5	1.4	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
A2L_zn_ribbon	PF08792.5	gi|429216658|ref|YP_007174648.1|	-	0.015	14.7	4.1	1.7	8.2	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|429216658|ref|YP_007174648.1|	-	0.021	14.7	1.7	0.59	10.1	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|429216658|ref|YP_007174648.1|	-	0.074	12.9	0.1	11	5.9	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
Prim_Zn_Ribbon	PF08273.7	gi|429216658|ref|YP_007174648.1|	-	0.077	13.0	4.6	0.22	11.6	3.2	1.7	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
Lar_restr_allev	PF14354.1	gi|429216658|ref|YP_007174648.1|	-	0.091	13.0	2.1	0.19	12.0	1.5	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
UPF0547	PF10571.4	gi|429216658|ref|YP_007174648.1|	-	0.1	12.3	5.3	0.64	9.7	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-C2H2_4	PF13894.1	gi|429216658|ref|YP_007174648.1|	-	0.13	12.6	1.1	10	6.6	0.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
TFIIS_C	PF01096.13	gi|429216658|ref|YP_007174648.1|	-	0.15	11.7	4.7	0.62	9.7	0.8	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
FdhE	PF04216.7	gi|429216658|ref|YP_007174648.1|	-	0.18	11.4	0.7	0.24	11.1	0.5	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
DUF3279	PF11682.3	gi|429216658|ref|YP_007174648.1|	-	0.23	11.0	1.8	1.1	8.8	0.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3279)
zf-ribbon_3	PF13248.1	gi|429216658|ref|YP_007174648.1|	-	0.23	10.6	2.9	3.3	7.0	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
CpXC	PF14353.1	gi|429216658|ref|YP_007174648.1|	-	0.3	11.0	1.6	1.7	8.6	0.0	2.0	1	1	1	2	2	2	0	CpXC	protein
zinc_ribbon_5	PF13719.1	gi|429216658|ref|YP_007174648.1|	-	0.72	9.4	4.1	6	6.5	2.8	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429216658|ref|YP_007174648.1|	-	0.92	9.2	4.2	8.9	6.1	2.9	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-Sec23_Sec24	PF04810.10	gi|429216658|ref|YP_007174648.1|	-	3.9	7.0	5.2	4.8	6.8	0.1	2.2	1	1	1	2	2	2	0	Sec23/Sec24	zinc	finger
RNase_PH	PF01138.16	gi|429216659|ref|YP_007174649.1|	-	3.9e-29	101.6	0.0	7e-29	100.8	0.0	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|429216659|ref|YP_007174649.1|	-	1.1e-08	34.8	0.5	2.4e-08	33.7	0.3	1.6	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
DUF2004	PF09406.5	gi|429216659|ref|YP_007174649.1|	-	0.0083	16.1	0.3	0.016	15.2	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2004)
DUF3215	PF11503.3	gi|429216659|ref|YP_007174649.1|	-	0.034	13.7	0.3	0.086	12.4	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3215)
RNase_PH	PF01138.16	gi|429216660|ref|YP_007174650.1|	-	3.9e-36	124.2	0.0	5.3e-36	123.8	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|429216660|ref|YP_007174650.1|	-	1.2e-12	47.5	0.8	2e-12	46.8	0.5	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_1	PF00013.24	gi|429216661|ref|YP_007174651.1|	-	1.7e-09	37.1	1.6	7.4e-09	35.1	1.1	2.2	1	1	0	1	1	1	1	KH	domain
KH_2	PF07650.12	gi|429216661|ref|YP_007174651.1|	-	4.7e-06	26.0	0.9	1.3e-05	24.6	0.2	2.1	1	1	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|429216661|ref|YP_007174651.1|	-	0.0002	20.9	0.1	0.00072	19.1	0.0	2.0	1	0	0	1	1	1	1	KH	domain
S1	PF00575.18	gi|429216661|ref|YP_007174651.1|	-	0.0007	19.6	0.1	0.021	14.9	0.0	3.1	3	1	0	3	3	3	1	S1	RNA	binding	domain
DUF2345	PF10106.4	gi|429216661|ref|YP_007174651.1|	-	0.12	12.0	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2345)
SBDS	PF01172.13	gi|429216662|ref|YP_007174652.1|	-	8.8e-26	89.5	0.8	2.1e-25	88.3	0.6	1.7	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|429216662|ref|YP_007174652.1|	-	9e-24	83.5	0.6	1.6e-23	82.7	0.4	1.4	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|429216662|ref|YP_007174652.1|	-	0.00024	20.9	0.0	0.00055	19.7	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
CDC37_C	PF08564.5	gi|429216662|ref|YP_007174652.1|	-	0.032	14.0	0.3	2.5	8.0	0.1	2.4	2	0	0	2	2	2	0	Cdc37	C	terminal	domain
Proteasome	PF00227.21	gi|429216663|ref|YP_007174653.1|	-	3.9e-56	189.3	0.0	5.1e-56	188.9	0.0	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|429216663|ref|YP_007174653.1|	-	1.7e-11	43.1	2.0	2.2e-11	42.8	0.2	2.1	3	0	0	3	3	3	1	Proteasome	subunit	A	N-terminal	signature
Ribosomal_L24e	PF01246.15	gi|429216664|ref|YP_007174654.1|	-	1.2e-16	60.3	0.9	1.3e-16	60.1	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|429216664|ref|YP_007174654.1|	-	0.075	12.6	0.9	0.11	12.1	0.6	1.4	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
RPAP2_Rtr1	PF04181.8	gi|429216664|ref|YP_007174654.1|	-	0.091	12.8	0.1	0.097	12.7	0.1	1.3	1	0	0	1	1	1	0	Rtr1/RPAP2	family
zf-HIT	PF04438.11	gi|429216664|ref|YP_007174654.1|	-	1.7	8.3	6.6	18	5.0	4.6	2.0	1	1	0	1	1	1	0	HIT	zinc	finger
Bac_Ubq_Cox	PF01654.12	gi|429216665|ref|YP_007174655.1|	-	9.3e-16	57.2	18.9	9.3e-16	57.2	13.1	2.4	2	1	0	2	2	2	2	Bacterial	Cytochrome	Ubiquinol	Oxidase
Phage_holin_5	PF06946.6	gi|429216665|ref|YP_007174655.1|	-	0.64	10.2	0.1	0.64	10.2	0.0	3.6	4	1	0	4	4	4	0	Phage	holin
Bac_Ubq_Cox	PF01654.12	gi|429216666|ref|YP_007174656.1|	-	8.3e-63	212.3	29.8	3.3e-60	203.7	20.6	2.8	1	1	0	1	1	1	1	Bacterial	Cytochrome	Ubiquinol	Oxidase
zf-HIT	PF04438.11	gi|429216668|ref|YP_007174658.1|	-	0.0074	15.9	5.6	0.0074	15.9	3.9	4.0	3	1	1	4	4	4	1	HIT	zinc	finger
C6_DPF	PF10170.4	gi|429216668|ref|YP_007174658.1|	-	0.011	15.7	1.5	0.011	15.7	1.0	2.7	1	1	1	2	2	2	0	Cysteine-rich	domain
zf-RING_5	PF14634.1	gi|429216668|ref|YP_007174658.1|	-	0.023	14.4	6.4	0.023	14.4	4.5	3.1	3	0	0	3	3	3	0	zinc-RING	finger	domain
zf-B_box	PF00643.19	gi|429216668|ref|YP_007174658.1|	-	0.21	11.4	23.7	0.097	12.5	2.3	3.6	3	1	0	3	3	3	0	B-box	zinc	finger
FYVE	PF01363.16	gi|429216668|ref|YP_007174658.1|	-	2.4	8.1	25.6	80	3.2	17.7	3.4	1	1	0	1	1	1	0	FYVE	zinc	finger
Prok-RING_2	PF14445.1	gi|429216668|ref|YP_007174658.1|	-	9.7	6.2	20.9	0.34	10.8	4.7	2.6	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	2
YbbR	PF07949.7	gi|429216669|ref|YP_007174659.1|	-	0.061	13.4	1.9	0.16	12.0	0.4	2.3	2	1	0	2	2	2	0	YbbR-like	protein
Lactamase_B	PF00753.22	gi|429216671|ref|YP_007174661.1|	-	1e-16	61.1	0.0	8.7e-13	48.3	0.0	2.1	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|429216671|ref|YP_007174661.1|	-	1.2e-07	31.4	0.0	1.5e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|429216671|ref|YP_007174661.1|	-	0.00023	20.8	0.0	0.00044	19.9	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Peptidase_M57	PF12388.3	gi|429216671|ref|YP_007174661.1|	-	0.11	11.8	0.1	0.17	11.2	0.1	1.3	1	0	0	1	1	1	0	Dual-action	HEIGH	metallo-peptidase
NTP_transferase	PF00483.18	gi|429216672|ref|YP_007174662.1|	-	7.5e-28	97.4	0.0	1.1e-27	96.9	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|429216672|ref|YP_007174662.1|	-	1.4e-13	51.2	0.0	1.9e-13	50.8	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|429216672|ref|YP_007174662.1|	-	2.2e-13	49.0	13.5	0.00018	20.8	1.3	4.3	3	1	0	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
CTP_transf_3	PF02348.14	gi|429216672|ref|YP_007174662.1|	-	0.029	14.0	0.0	0.049	13.2	0.0	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
IspD	PF01128.14	gi|429216672|ref|YP_007174662.1|	-	0.034	13.6	0.0	0.056	12.9	0.0	1.3	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Glycos_transf_2	PF00535.21	gi|429216672|ref|YP_007174662.1|	-	0.057	13.1	0.0	0.11	12.1	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Carbpep_Y_N	PF05388.6	gi|429216673|ref|YP_007174663.1|	-	0.043	13.9	0.1	0.05	13.7	0.1	1.2	1	0	0	1	1	1	0	Carboxypeptidase	Y	pro-peptide
Ribosomal_S3Ae	PF01015.13	gi|429216674|ref|YP_007174664.1|	-	2.8e-66	222.5	8.5	3.2e-66	222.3	5.9	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
EKR	PF10371.4	gi|429216674|ref|YP_007174664.1|	-	0.069	12.7	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function
Antimicrobial_7	PF08102.6	gi|429216674|ref|YP_007174664.1|	-	0.084	12.9	2.0	0.46	10.5	0.5	2.3	2	0	0	2	2	2	0	Scorpion	antimicrobial	peptide
Phage_HK97_TLTM	PF06120.6	gi|429216674|ref|YP_007174664.1|	-	0.12	11.6	1.5	0.29	10.4	0.2	1.9	1	1	0	2	2	2	0	Tail	length	tape	measure	protein
Pcc1	PF09341.5	gi|429216675|ref|YP_007174665.1|	-	0.0038	17.2	0.0	0.0059	16.6	0.0	1.3	1	1	0	1	1	1	1	Transcription	factor	Pcc1
DUF1374	PF07118.6	gi|429216676|ref|YP_007174666.1|	-	1.6	8.8	6.7	0.31	11.1	0.9	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1374)
Ribosomal_S15	PF00312.17	gi|429216677|ref|YP_007174667.1|	-	8e-21	73.5	0.5	1.3e-20	72.8	0.1	1.5	2	0	0	2	2	2	1	Ribosomal	protein	S15
Ribosomal_S13_N	PF08069.7	gi|429216677|ref|YP_007174667.1|	-	2.3e-20	72.1	0.1	3.9e-20	71.4	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
3-dmu-9_3-mt	PF06983.8	gi|429216677|ref|YP_007174667.1|	-	0.14	12.4	0.0	0.45	10.8	0.0	1.7	2	0	0	2	2	2	0	3-demethylubiquinone-9	3-methyltransferase
NDK	PF00334.14	gi|429216678|ref|YP_007174668.1|	-	1.7e-55	186.5	0.0	1.9e-55	186.3	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GTP_EFTU	PF00009.22	gi|429216679|ref|YP_007174669.1|	-	7.7e-30	103.7	0.0	3.5e-29	101.5	0.0	2.0	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.1	gi|429216679|ref|YP_007174669.1|	-	1.6e-25	88.4	0.8	1.6e-25	88.4	0.6	2.8	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.3	gi|429216679|ref|YP_007174669.1|	-	3.6e-22	78.2	4.7	7.2e-22	77.3	2.6	2.1	1	1	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|429216679|ref|YP_007174669.1|	-	2.5e-11	43.5	2.4	8.1e-10	38.6	0.0	2.7	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|429216679|ref|YP_007174669.1|	-	2.3e-05	24.3	0.3	0.00012	21.9	0.0	2.3	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|429216679|ref|YP_007174669.1|	-	0.00067	20.1	0.0	0.002	18.6	0.0	1.9	1	0	0	1	1	1	1	Miro-like	protein
DUF367	PF04034.8	gi|429216679|ref|YP_007174669.1|	-	0.012	15.2	0.1	0.084	12.4	0.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF367)
Dynamin_N	PF00350.18	gi|429216679|ref|YP_007174669.1|	-	0.013	15.3	0.7	0.22	11.3	0.0	2.8	3	0	0	3	3	3	0	Dynamin	family
Ras	PF00071.17	gi|429216679|ref|YP_007174669.1|	-	0.034	13.5	0.0	0.23	10.8	0.0	2.3	1	1	0	1	1	1	0	Ras	family
AAA_24	PF13479.1	gi|429216679|ref|YP_007174669.1|	-	0.095	12.2	0.0	0.28	10.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DUF1938	PF09153.5	gi|429216680|ref|YP_007174670.1|	-	0.014	15.2	1.2	0.032	14.0	0.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1938)
TrbH	PF07283.6	gi|429216680|ref|YP_007174670.1|	-	0.019	14.8	0.0	0.067	13.0	0.0	1.7	2	0	0	2	2	2	0	Conjugal	transfer	protein	TrbH
Cbl_N2	PF02761.9	gi|429216681|ref|YP_007174671.1|	-	0.016	15.2	0.0	0.018	15.1	0.0	1.2	1	0	0	1	1	1	0	CBL	proto-oncogene	N-terminus,	EF	hand-like	domain
Ribosomal_S6e	PF01092.14	gi|429216682|ref|YP_007174672.1|	-	3.9e-22	78.2	0.4	2.9e-21	75.3	0.0	2.3	2	1	0	2	2	2	1	Ribosomal	protein	S6e
DUF1735	PF08522.5	gi|429216683|ref|YP_007174673.1|	-	0.093	13.1	0.7	0.66	10.3	0.0	2.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1735)
tRNA-synt_1	PF00133.17	gi|429216684|ref|YP_007174674.1|	-	3.9e-64	216.7	9.9	3.3e-63	213.6	4.9	2.9	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|429216684|ref|YP_007174674.1|	-	5.4e-27	94.4	7.9	2.9e-12	45.9	0.0	4.4	2	2	0	2	2	2	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|429216684|ref|YP_007174674.1|	-	4.8e-22	78.3	4.4	4.8e-22	78.3	3.0	2.3	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|429216684|ref|YP_007174674.1|	-	1.5e-14	53.7	3.4	4.8e-14	52.0	0.6	2.4	1	1	1	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|429216684|ref|YP_007174674.1|	-	2.1e-09	36.9	4.9	3.4e-06	26.3	0.0	3.5	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
HD_3	PF13023.1	gi|429216685|ref|YP_007174675.1|	-	2.6e-16	59.8	0.0	4.5e-16	59.0	0.0	1.4	1	1	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|429216685|ref|YP_007174675.1|	-	3.8e-05	23.6	0.1	0.00012	22.0	0.1	1.7	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|429216685|ref|YP_007174675.1|	-	0.00019	20.7	0.0	0.00026	20.3	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
AXE1	PF05448.7	gi|429216685|ref|YP_007174675.1|	-	0.018	13.5	0.0	0.027	12.9	0.0	1.2	1	0	0	1	1	1	0	Acetyl	xylan	esterase	(AXE1)
HGD-D	PF06050.8	gi|429216686|ref|YP_007174676.1|	-	0.11	11.3	0.0	0.16	10.7	0.0	1.2	1	0	0	1	1	1	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
zf-CCHC	PF00098.18	gi|429216686|ref|YP_007174676.1|	-	2.4	8.2	10.3	7.4	6.6	0.8	2.5	2	0	0	2	2	2	0	Zinc	knuckle
Radical_SAM	PF04055.16	gi|429216687|ref|YP_007174677.1|	-	3.3e-20	72.9	0.0	7.4e-20	71.7	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|429216687|ref|YP_007174677.1|	-	0.00029	20.9	0.0	0.00063	19.8	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
zf-ribbon_3	PF13248.1	gi|429216687|ref|YP_007174677.1|	-	0.00043	19.4	8.3	0.078	12.2	0.2	3.3	3	0	0	3	3	3	2	zinc-ribbon	domain
DZR	PF12773.2	gi|429216687|ref|YP_007174677.1|	-	0.003	17.3	0.1	0.003	17.3	0.1	2.6	3	0	0	3	3	3	1	Double	zinc	ribbon
Fer4_14	PF13394.1	gi|429216687|ref|YP_007174677.1|	-	0.0078	16.2	0.1	0.076	13.0	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Auto_anti-p27	PF06677.7	gi|429216687|ref|YP_007174677.1|	-	0.018	14.8	0.1	0.018	14.8	0.1	3.4	4	0	0	4	4	4	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-ISL3	PF14690.1	gi|429216687|ref|YP_007174677.1|	-	0.06	13.3	10.5	0.32	11.0	0.0	2.8	2	1	1	3	3	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C4_Topoisom	PF01396.14	gi|429216687|ref|YP_007174677.1|	-	0.13	11.7	0.0	0.13	11.7	0.0	2.8	3	0	0	3	3	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-NADH-PPase	PF09297.6	gi|429216687|ref|YP_007174677.1|	-	0.35	10.4	0.1	0.35	10.4	0.0	2.7	3	0	0	3	3	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|429216687|ref|YP_007174677.1|	-	0.57	10.2	4.9	4.1	7.4	0.0	3.2	4	0	0	4	4	3	0	zinc-finger
zinc_ribbon_2	PF13240.1	gi|429216687|ref|YP_007174677.1|	-	0.84	9.2	15.2	0.036	13.5	4.1	2.8	2	1	1	3	3	2	0	zinc-ribbon	domain
GFA	PF04828.9	gi|429216687|ref|YP_007174677.1|	-	1	9.3	0.0	1	9.3	0.0	3.2	3	1	1	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-FPG_IleRS	PF06827.9	gi|429216687|ref|YP_007174677.1|	-	2	8.1	10.8	0.23	11.1	0.2	3.3	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_5	PF13719.1	gi|429216687|ref|YP_007174677.1|	-	5.2	6.7	7.3	6	6.5	0.1	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|429216688|ref|YP_007174678.1|	-	1.1e-07	31.4	0.7	2e-07	30.5	0.5	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
OrfB_Zn_ribbon	PF07282.6	gi|429216688|ref|YP_007174678.1|	-	0.00024	20.6	0.2	0.00046	19.7	0.1	1.5	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF2387	PF09526.5	gi|429216688|ref|YP_007174678.1|	-	0.00048	20.0	4.5	0.0015	18.4	3.1	1.8	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
Zn_ribbon_recom	PF13408.1	gi|429216688|ref|YP_007174678.1|	-	0.00054	20.1	5.0	0.11	12.7	0.2	2.3	1	1	1	2	2	2	2	Recombinase	zinc	beta	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429216688|ref|YP_007174678.1|	-	0.00062	19.1	5.0	0.11	12.0	0.0	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|429216688|ref|YP_007174678.1|	-	0.0009	18.3	1.2	0.19	10.9	0.2	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|429216688|ref|YP_007174678.1|	-	0.0011	18.1	0.5	0.0011	18.1	0.3	1.7	2	0	0	2	2	1	1	Transcription	factor	zinc-finger
zf-NADH-PPase	PF09297.6	gi|429216688|ref|YP_007174678.1|	-	0.0022	17.4	2.5	0.037	13.5	1.7	2.2	1	1	1	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|429216688|ref|YP_007174678.1|	-	0.0064	16.4	4.1	0.048	13.7	0.3	2.2	1	1	1	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Elf1	PF05129.8	gi|429216688|ref|YP_007174678.1|	-	0.0076	15.9	1.4	0.012	15.2	0.3	1.8	1	1	1	2	2	2	1	Transcription	elongation	factor	Elf1	like
Zn_Tnp_IS1595	PF12760.2	gi|429216688|ref|YP_007174678.1|	-	0.011	15.4	0.3	0.019	14.7	0.2	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DZR	PF12773.2	gi|429216688|ref|YP_007174678.1|	-	0.019	14.7	1.3	0.041	13.6	0.9	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-IS66	PF13005.2	gi|429216688|ref|YP_007174678.1|	-	0.02	14.8	0.9	0.37	10.7	0.1	2.4	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
DNA_ligase_ZBD	PF03119.11	gi|429216688|ref|YP_007174678.1|	-	0.025	14.2	0.1	0.067	12.9	0.0	1.8	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_5	PF13719.1	gi|429216688|ref|YP_007174678.1|	-	0.026	14.1	0.8	0.58	9.7	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429216688|ref|YP_007174678.1|	-	0.029	14.0	0.8	0.7	9.6	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
IBR	PF01485.16	gi|429216688|ref|YP_007174678.1|	-	0.036	13.9	0.6	0.067	13.0	0.4	1.5	1	0	0	1	1	1	0	IBR	domain
Cys_rich_CPCC	PF14206.1	gi|429216688|ref|YP_007174678.1|	-	0.054	13.0	0.9	0.69	9.5	0.1	2.1	2	0	0	2	2	2	0	Cysteine-rich	CPCC
Nudix_N_2	PF14803.1	gi|429216688|ref|YP_007174678.1|	-	0.063	12.9	1.0	2.4	7.9	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
YhfH	PF14149.1	gi|429216688|ref|YP_007174678.1|	-	0.086	12.6	1.5	2.4	8.0	0.1	2.4	2	0	0	2	2	2	0	YhfH-like	protein
Lar_restr_allev	PF14354.1	gi|429216688|ref|YP_007174678.1|	-	0.13	12.6	1.3	0.27	11.5	0.9	1.8	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
UPF0547	PF10571.4	gi|429216688|ref|YP_007174678.1|	-	0.14	11.8	1.4	12	5.7	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
A2L_zn_ribbon	PF08792.5	gi|429216688|ref|YP_007174678.1|	-	0.17	11.3	3.7	6.3	6.3	0.1	2.7	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
Ogr_Delta	PF04606.7	gi|429216688|ref|YP_007174678.1|	-	0.18	11.4	3.9	4.6	6.9	0.1	2.8	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
FYDLN_acid	PF09538.5	gi|429216688|ref|YP_007174678.1|	-	0.18	12.3	8.3	0.7	10.4	5.8	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
C1_1	PF00130.17	gi|429216688|ref|YP_007174678.1|	-	0.2	11.4	0.7	0.3	10.8	0.5	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
TFIIS_C	PF01096.13	gi|429216688|ref|YP_007174678.1|	-	0.27	10.9	1.2	11	5.7	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DNA_RNApol_7kD	PF03604.8	gi|429216688|ref|YP_007174678.1|	-	0.28	10.6	2.3	0.66	9.4	1.6	1.7	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF1936	PF09151.5	gi|429216688|ref|YP_007174678.1|	-	0.29	10.6	6.9	1.4	8.4	4.8	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1936)
Zn-ribbon_8	PF09723.5	gi|429216688|ref|YP_007174678.1|	-	0.3	11.0	4.7	4.3	7.3	0.2	2.3	1	1	0	2	2	2	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|429216688|ref|YP_007174678.1|	-	0.32	10.3	8.5	0.04	13.2	2.1	2.3	2	1	0	2	2	1	0	TFIIB	zinc-binding
zf-C4_Topoisom	PF01396.14	gi|429216688|ref|YP_007174678.1|	-	0.59	9.6	4.1	1.3	8.5	1.3	2.2	1	1	1	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Auto_anti-p27	PF06677.7	gi|429216688|ref|YP_007174678.1|	-	1.8	8.3	5.1	6.7	6.5	3.6	1.8	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF1610	PF07754.6	gi|429216688|ref|YP_007174678.1|	-	4.5	7.4	6.4	9.6	6.4	0.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
NTP_transferase	PF00483.18	gi|429216689|ref|YP_007174679.1|	-	3.6e-36	124.7	0.0	4.8e-36	124.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|429216689|ref|YP_007174679.1|	-	5e-12	46.1	0.0	6.4e-12	45.8	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
AhpC-TSA	PF00578.16	gi|429216690|ref|YP_007174680.1|	-	5e-39	132.8	0.0	6.5e-39	132.4	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|429216690|ref|YP_007174680.1|	-	5e-26	90.9	0.0	5.8e-26	90.7	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AhpC-TSA_2	PF13911.1	gi|429216690|ref|YP_007174680.1|	-	0.00044	20.1	0.0	0.00058	19.7	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
DUF899	PF05988.7	gi|429216690|ref|YP_007174680.1|	-	0.00073	19.0	0.0	0.0008	18.9	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
GSHPx	PF00255.14	gi|429216690|ref|YP_007174680.1|	-	0.00082	18.7	0.0	0.0018	17.6	0.0	1.6	1	1	0	1	1	1	1	Glutathione	peroxidase
SCO1-SenC	PF02630.9	gi|429216690|ref|YP_007174680.1|	-	0.00091	18.8	0.1	0.0048	16.5	0.1	2.0	1	1	1	2	2	2	1	SCO1/SenC
GTP_EFTU	PF00009.22	gi|429216691|ref|YP_007174681.1|	-	6e-42	143.2	0.0	9.5e-42	142.5	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|429216691|ref|YP_007174681.1|	-	1.9e-30	104.7	0.8	3.7e-30	103.8	0.5	1.5	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|429216691|ref|YP_007174681.1|	-	3.3e-08	33.5	0.6	4.9e-07	29.7	0.2	2.8	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
PduV-EutP	PF10662.4	gi|429216691|ref|YP_007174681.1|	-	0.00029	20.3	0.6	0.19	11.2	0.1	2.3	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|429216691|ref|YP_007174681.1|	-	0.00097	19.0	0.0	0.0018	18.1	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Dynamin_N	PF00350.18	gi|429216691|ref|YP_007174681.1|	-	0.037	13.8	0.0	0.081	12.7	0.0	1.8	1	1	0	1	1	1	0	Dynamin	family
Miro	PF08477.8	gi|429216691|ref|YP_007174681.1|	-	0.069	13.6	0.0	0.27	11.7	0.0	2.0	2	0	0	2	2	2	0	Miro-like	protein
FeoB_N	PF02421.13	gi|429216691|ref|YP_007174681.1|	-	0.083	12.1	0.5	4.1	6.6	0.0	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
ArgK	PF03308.11	gi|429216691|ref|YP_007174681.1|	-	0.1	11.3	0.2	1.3	7.6	0.0	2.1	2	0	0	2	2	2	0	ArgK	protein
Fcf1	PF04900.7	gi|429216692|ref|YP_007174682.1|	-	2e-15	56.6	0.3	3.5e-15	55.9	0.2	1.4	1	1	0	1	1	1	1	Fcf1
NYN_YacP	PF05991.6	gi|429216692|ref|YP_007174682.1|	-	0.0055	16.4	0.5	0.011	15.4	0.4	1.6	1	1	0	1	1	1	1	YacP-like	NYN	domain
PIN_4	PF13638.1	gi|429216692|ref|YP_007174682.1|	-	0.019	15.0	3.3	0.15	12.1	2.3	2.0	1	1	0	1	1	1	0	PIN	domain
Thioredoxin_2	PF13098.1	gi|429216692|ref|YP_007174682.1|	-	0.086	13.0	0.1	0.12	12.5	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin-like	domain
Tox-REase-2	PF15646.1	gi|429216692|ref|YP_007174682.1|	-	0.089	12.6	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	Restriction	endonuclease	fold	toxin	2
Thioredoxin_8	PF13905.1	gi|429216692|ref|YP_007174682.1|	-	0.12	12.4	1.1	0.2	11.8	0.7	1.5	1	1	0	1	1	1	0	Thioredoxin-like
DUF2536	PF10750.4	gi|429216692|ref|YP_007174682.1|	-	0.48	10.0	2.5	1.5	8.4	0.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2536)
CN_hydrolase	PF00795.17	gi|429216693|ref|YP_007174683.1|	-	0.00069	19.0	0.1	0.0019	17.5	0.0	1.8	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
PMT_2	PF13231.1	gi|429216694|ref|YP_007174684.1|	-	2.2e-11	43.9	18.7	2.2e-11	43.9	12.9	2.3	2	0	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|429216694|ref|YP_007174684.1|	-	7.8e-05	22.1	30.1	0.00045	19.6	12.9	3.2	2	1	1	3	3	3	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Phosphorylase	PF00343.15	gi|429216695|ref|YP_007174685.1|	-	1.5e-12	46.2	0.6	5.2e-11	41.1	0.0	2.1	1	1	1	2	2	2	2	Carbohydrate	phosphorylase
Glycos_transf_1	PF00534.15	gi|429216695|ref|YP_007174685.1|	-	3.6e-11	42.7	0.0	1.4e-10	40.8	0.0	1.9	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429216695|ref|YP_007174685.1|	-	9.8e-05	22.5	0.0	0.00017	21.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Peripla_BP_2	PF01497.13	gi|429216696|ref|YP_007174686.1|	-	2.1e-30	105.6	0.0	2.6e-30	105.3	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
MRG	PF05712.8	gi|429216696|ref|YP_007174686.1|	-	0.017	14.0	0.0	0.032	13.1	0.0	1.5	1	0	0	1	1	1	0	MRG
DUF2584	PF10763.4	gi|429216696|ref|YP_007174686.1|	-	0.03	14.1	0.4	0.17	11.7	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2584)
MM_CoA_mutase	PF01642.17	gi|429216697|ref|YP_007174687.1|	-	5.6e-193	641.7	0.0	6.4e-193	641.5	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
B12-binding	PF02310.14	gi|429216698|ref|YP_007174688.1|	-	2.8e-22	78.8	0.4	3.3e-22	78.5	0.3	1.2	1	0	0	1	1	1	1	B12	binding	domain
Peripla_BP_4	PF13407.1	gi|429216698|ref|YP_007174688.1|	-	0.017	14.5	0.1	0.02	14.2	0.1	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
LNS2	PF08235.8	gi|429216698|ref|YP_007174688.1|	-	0.021	14.4	0.1	0.032	13.7	0.0	1.3	1	1	0	1	1	1	0	LNS2	(Lipin/Ned1/Smp2)
HisG_C	PF08029.6	gi|429216698|ref|YP_007174688.1|	-	0.042	13.7	0.2	0.25	11.3	0.1	2.2	2	1	0	2	2	2	0	HisG,	C-terminal	domain
PEP_mutase	PF13714.1	gi|429216698|ref|YP_007174688.1|	-	0.049	12.8	0.0	0.17	11.0	0.0	1.8	1	1	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
Peripla_BP_6	PF13458.1	gi|429216698|ref|YP_007174688.1|	-	0.1	11.9	0.0	0.12	11.7	0.0	1.1	1	0	0	1	1	1	0	Periplasmic	binding	protein
adh_short_C2	PF13561.1	gi|429216698|ref|YP_007174688.1|	-	0.12	12.0	0.1	0.15	11.8	0.0	1.1	1	0	0	1	1	1	0	Enoyl-(Acyl	carrier	protein)	reductase
DUF2312	PF10073.4	gi|429216698|ref|YP_007174688.1|	-	0.64	9.4	3.1	0.53	9.6	0.7	2.0	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
ArgK	PF03308.11	gi|429216699|ref|YP_007174689.1|	-	2.9e-102	341.0	0.4	3.5e-102	340.7	0.3	1.0	1	0	0	1	1	1	1	ArgK	protein
CbiA	PF01656.18	gi|429216699|ref|YP_007174689.1|	-	8.4e-11	41.6	0.4	1.7e-10	40.6	0.2	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
cobW	PF02492.14	gi|429216699|ref|YP_007174689.1|	-	8.9e-09	35.0	2.0	3.4e-08	33.1	1.4	1.8	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
SRP54	PF00448.17	gi|429216699|ref|YP_007174689.1|	-	7.4e-07	28.8	0.3	2.7e-06	26.9	0.2	1.9	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
ATP_bind_1	PF03029.12	gi|429216699|ref|YP_007174689.1|	-	8.4e-07	28.7	0.2	0.00011	21.8	0.0	3.1	2	1	1	3	3	3	1	Conserved	hypothetical	ATP	binding	protein
MobB	PF03205.9	gi|429216699|ref|YP_007174689.1|	-	1.8e-06	27.7	0.6	9.1e-06	25.4	0.1	2.1	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|429216699|ref|YP_007174689.1|	-	1.3e-05	25.0	0.6	2.7e-05	23.9	0.4	1.5	1	0	0	1	1	1	1	NTPase
AAA_16	PF13191.1	gi|429216699|ref|YP_007174689.1|	-	3e-05	24.1	0.1	5.4e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|429216699|ref|YP_007174689.1|	-	9e-05	22.0	0.5	0.00027	20.4	0.1	1.8	1	1	1	2	2	2	1	AAA-like	domain
GTP_EFTU	PF00009.22	gi|429216699|ref|YP_007174689.1|	-	0.00011	21.6	0.5	0.032	13.6	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AAA_17	PF13207.1	gi|429216699|ref|YP_007174689.1|	-	0.00013	22.7	0.2	0.00032	21.4	0.1	1.7	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|429216699|ref|YP_007174689.1|	-	0.00014	20.8	0.7	0.00022	20.1	0.1	1.6	2	0	0	2	2	2	1	NB-ARC	domain
AAA_31	PF13614.1	gi|429216699|ref|YP_007174689.1|	-	0.00018	21.4	0.4	0.9	9.4	0.0	3.1	4	0	0	4	4	3	2	AAA	domain
KTI12	PF08433.5	gi|429216699|ref|YP_007174689.1|	-	0.00044	19.5	0.1	0.00083	18.6	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
KAP_NTPase	PF07693.9	gi|429216699|ref|YP_007174689.1|	-	0.0005	19.1	0.5	0.0032	16.4	0.0	2.3	2	1	1	3	3	3	1	KAP	family	P-loop	domain
AAA_30	PF13604.1	gi|429216699|ref|YP_007174689.1|	-	0.0011	18.6	0.0	0.002	17.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|429216699|ref|YP_007174689.1|	-	0.0012	18.0	0.0	0.0027	16.8	0.0	1.6	1	0	0	1	1	1	1	KaiC
AAA_18	PF13238.1	gi|429216699|ref|YP_007174689.1|	-	0.0014	18.9	0.6	0.0014	18.9	0.4	2.2	2	1	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|429216699|ref|YP_007174689.1|	-	0.002	17.8	0.8	0.0045	16.7	0.1	1.9	2	0	0	2	2	2	1	Archaeal	ATPase
TrwB_AAD_bind	PF10412.4	gi|429216699|ref|YP_007174689.1|	-	0.0021	16.7	0.1	0.0035	16.0	0.1	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Viral_helicase1	PF01443.13	gi|429216699|ref|YP_007174689.1|	-	0.0026	17.3	0.1	0.0039	16.7	0.0	1.3	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
MMR_HSR1	PF01926.18	gi|429216699|ref|YP_007174689.1|	-	0.0042	17.0	1.4	0.0094	15.8	1.0	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
ABC_tran	PF00005.22	gi|429216699|ref|YP_007174689.1|	-	0.0046	17.2	0.2	0.013	15.8	0.1	1.7	1	0	0	1	1	1	1	ABC	transporter
MipZ	PF09140.6	gi|429216699|ref|YP_007174689.1|	-	0.0056	15.7	0.0	0.011	14.8	0.0	1.6	1	1	0	1	1	1	1	ATPase	MipZ
AAA_14	PF13173.1	gi|429216699|ref|YP_007174689.1|	-	0.0059	16.5	0.6	0.017	15.0	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
APS_kinase	PF01583.15	gi|429216699|ref|YP_007174689.1|	-	0.0077	15.9	0.0	0.023	14.3	0.0	1.8	2	0	0	2	2	1	1	Adenylylsulphate	kinase
AAA_22	PF13401.1	gi|429216699|ref|YP_007174689.1|	-	0.0078	16.3	0.0	0.02	15.0	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
Arf	PF00025.16	gi|429216699|ref|YP_007174689.1|	-	0.011	15.0	0.3	1.1	8.5	0.0	2.3	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
Zeta_toxin	PF06414.7	gi|429216699|ref|YP_007174689.1|	-	0.02	13.9	0.1	0.044	12.8	0.1	1.6	1	0	0	1	1	1	0	Zeta	toxin
Thymidylate_kin	PF02223.12	gi|429216699|ref|YP_007174689.1|	-	0.021	14.2	0.0	0.055	12.8	0.0	1.7	2	0	0	2	2	2	0	Thymidylate	kinase
PIF1	PF05970.9	gi|429216699|ref|YP_007174689.1|	-	0.022	13.7	0.0	0.048	12.5	0.0	1.5	1	0	0	1	1	1	0	PIF1-like	helicase
T2SE	PF00437.15	gi|429216699|ref|YP_007174689.1|	-	0.026	13.4	0.0	0.044	12.6	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|429216699|ref|YP_007174689.1|	-	0.027	14.1	0.1	0.064	13.0	0.1	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
NACHT	PF05729.7	gi|429216699|ref|YP_007174689.1|	-	0.035	13.7	0.2	0.098	12.3	0.1	1.7	1	0	0	1	1	1	0	NACHT	domain
DUF258	PF03193.11	gi|429216699|ref|YP_007174689.1|	-	0.037	13.2	0.2	0.097	11.8	0.1	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|429216699|ref|YP_007174689.1|	-	0.04	13.4	0.4	0.092	12.2	0.3	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|429216699|ref|YP_007174689.1|	-	0.042	13.7	0.0	0.085	12.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|429216699|ref|YP_007174689.1|	-	0.044	12.7	0.1	0.068	12.1	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
DUF87	PF01935.12	gi|429216699|ref|YP_007174689.1|	-	0.052	13.3	1.0	0.052	13.3	0.7	2.1	2	1	1	3	3	3	0	Domain	of	unknown	function	DUF87
DAP3	PF10236.4	gi|429216699|ref|YP_007174689.1|	-	0.054	12.4	0.2	0.17	10.8	0.0	1.8	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
FtsK_SpoIIIE	PF01580.13	gi|429216699|ref|YP_007174689.1|	-	0.076	12.4	0.3	0.13	11.6	0.2	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
PRK	PF00485.13	gi|429216699|ref|YP_007174689.1|	-	0.1	12.1	0.1	0.18	11.3	0.1	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_25	PF13481.1	gi|429216699|ref|YP_007174689.1|	-	0.11	11.8	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|429216699|ref|YP_007174689.1|	-	0.11	12.9	0.1	0.28	11.6	0.1	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_28	PF13521.1	gi|429216699|ref|YP_007174689.1|	-	0.13	12.2	0.6	0.41	10.5	0.3	1.9	2	0	0	2	2	2	0	AAA	domain
ArsA_ATPase	PF02374.10	gi|429216699|ref|YP_007174689.1|	-	0.57	9.1	5.4	0.3	10.0	0.6	2.2	2	0	0	2	2	2	0	Anion-transporting	ATPase
Ribosomal_S28e	PF01200.13	gi|429216700|ref|YP_007174690.1|	-	6.1e-30	102.7	6.7	8.5e-30	102.3	4.7	1.3	1	1	0	1	1	1	1	Ribosomal	protein	S28e
RNase_P_Rpp14	PF01900.14	gi|429216701|ref|YP_007174691.1|	-	2.8e-20	72.2	0.2	4.2e-20	71.6	0.0	1.4	2	0	0	2	2	2	1	Rpp14/Pop5	family
MMR_HSR1_C	PF08438.5	gi|429216702|ref|YP_007174692.1|	-	6.7e-33	113.1	0.0	1.5e-32	112.0	0.0	1.6	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|429216702|ref|YP_007174692.1|	-	4.5e-17	62.0	0.0	4.1e-15	55.7	0.0	2.6	1	1	0	2	2	2	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|429216702|ref|YP_007174692.1|	-	7.4e-14	51.3	0.0	1.4e-13	50.4	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|429216702|ref|YP_007174692.1|	-	4.9e-06	25.8	1.2	0.00043	19.6	0.0	3.0	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|429216702|ref|YP_007174692.1|	-	5.5e-05	23.6	0.2	0.14	12.6	0.0	3.1	2	1	0	2	2	2	2	Miro-like	protein
YchF-GTPase_C	PF06071.8	gi|429216702|ref|YP_007174692.1|	-	0.00073	19.2	0.1	0.014	15.1	0.0	2.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF933)
Arf	PF00025.16	gi|429216702|ref|YP_007174692.1|	-	0.0013	17.9	0.1	0.003	16.8	0.1	1.5	1	0	0	1	1	1	1	ADP-ribosylation	factor	family
GTP_EFTU	PF00009.22	gi|429216702|ref|YP_007174692.1|	-	0.0023	17.3	0.2	0.18	11.2	0.1	3.0	3	1	0	3	3	3	1	Elongation	factor	Tu	GTP	binding	domain
NOG1	PF06858.9	gi|429216702|ref|YP_007174692.1|	-	0.033	14.0	0.4	0.48	10.3	0.1	2.6	2	0	0	2	2	2	0	Nucleolar	GTP-binding	protein	1	(NOG1)
Lip_prot_lig_C	PF10437.4	gi|429216702|ref|YP_007174692.1|	-	0.037	13.6	0.2	0.091	12.4	0.1	1.8	1	0	0	1	1	1	0	Bacterial	lipoate	protein	ligase	C-terminus
Dynamin_N	PF00350.18	gi|429216702|ref|YP_007174692.1|	-	0.086	12.6	0.2	3.6	7.3	0.0	3.0	3	0	0	3	3	3	0	Dynamin	family
Ras	PF00071.17	gi|429216702|ref|YP_007174692.1|	-	0.12	11.7	0.1	2.9	7.2	0.0	2.3	2	0	0	2	2	2	0	Ras	family
Zn_Tnp_IS1	PF03811.8	gi|429216702|ref|YP_007174692.1|	-	0.16	11.5	0.1	0.27	10.7	0.1	1.3	1	0	0	1	1	1	0	InsA	N-terminal	domain
DUF3510	PF12022.3	gi|429216703|ref|YP_007174693.1|	-	0.011	15.8	3.6	0.045	13.8	0.6	2.2	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3510)
DUF1886	PF09171.5	gi|429216703|ref|YP_007174693.1|	-	0.018	14.0	0.1	0.025	13.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1886)
DUF3447	PF11929.3	gi|429216703|ref|YP_007174693.1|	-	0.25	11.1	3.5	0.47	10.2	0.3	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3447)
TRAM	PF01938.15	gi|429216704|ref|YP_007174694.1|	-	0.0006	19.5	1.0	0.0009	18.9	0.7	1.3	1	0	0	1	1	1	1	TRAM	domain
S1	PF00575.18	gi|429216704|ref|YP_007174694.1|	-	0.024	14.7	4.8	0.14	12.2	0.0	2.9	1	1	2	3	3	3	0	S1	RNA	binding	domain
MaoC_dehydratas	PF01575.14	gi|429216704|ref|YP_007174694.1|	-	0.032	13.6	0.1	0.04	13.2	0.1	1.2	1	0	0	1	1	1	0	MaoC	like	domain
ATP-grasp_2	PF08442.5	gi|429216705|ref|YP_007174695.1|	-	4.2e-54	182.9	0.8	1.3e-53	181.3	0.1	1.9	2	0	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|429216705|ref|YP_007174695.1|	-	2.2e-15	56.5	0.8	2.9e-15	56.1	0.1	1.5	2	0	0	2	2	2	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|429216705|ref|YP_007174695.1|	-	8.2e-06	25.1	0.6	3.7e-05	23.0	0.2	2.1	2	1	0	2	2	2	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|429216705|ref|YP_007174695.1|	-	2e-05	24.2	0.2	3.6e-05	23.4	0.2	1.3	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
CPSase_L_D2	PF02786.12	gi|429216705|ref|YP_007174695.1|	-	0.014	14.6	0.1	0.039	13.2	0.1	1.7	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_4	PF13535.1	gi|429216705|ref|YP_007174695.1|	-	0.033	13.9	0.0	0.052	13.2	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
CoA_binding	PF02629.14	gi|429216706|ref|YP_007174696.1|	-	2.8e-30	104.6	3.6	2.9e-30	104.6	0.9	2.1	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|429216706|ref|YP_007174696.1|	-	4e-16	58.9	0.3	7.3e-16	58.1	0.2	1.4	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|429216706|ref|YP_007174696.1|	-	4.5e-13	48.9	0.0	8e-13	48.1	0.0	1.4	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|429216706|ref|YP_007174696.1|	-	2e-09	37.6	0.3	4.9e-09	36.3	0.1	1.8	2	1	0	2	2	2	1	CoA	binding	domain
IlvN	PF07991.7	gi|429216706|ref|YP_007174696.1|	-	0.0033	16.8	1.8	0.0045	16.3	0.4	1.8	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ResIII	PF04851.10	gi|429216707|ref|YP_007174697.1|	-	4.4e-24	85.3	0.8	3.5e-23	82.4	0.0	2.7	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|429216707|ref|YP_007174697.1|	-	6.9e-17	61.0	0.1	4.9e-16	58.3	0.0	2.4	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|429216707|ref|YP_007174697.1|	-	2e-10	40.4	0.0	2.3e-09	36.9	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|429216707|ref|YP_007174697.1|	-	7.7e-08	31.4	0.1	8.9e-06	24.7	0.0	2.6	2	1	1	3	3	3	2	SNF2	family	N-terminal	domain
AAA_22	PF13401.1	gi|429216707|ref|YP_007174697.1|	-	0.00039	20.5	0.0	0.0015	18.7	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|429216707|ref|YP_007174697.1|	-	0.0026	16.7	0.3	0.013	14.5	0.0	2.1	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
ApoLp-III	PF07464.6	gi|429216707|ref|YP_007174697.1|	-	0.01	15.8	1.2	0.026	14.5	0.8	1.6	1	0	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
AAA_19	PF13245.1	gi|429216707|ref|YP_007174697.1|	-	0.16	11.7	0.0	37	4.1	0.0	3.2	3	1	0	3	3	3	0	Part	of	AAA	domain
AAA	PF00004.24	gi|429216707|ref|YP_007174697.1|	-	0.18	11.9	1.3	9.8	6.3	0.1	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
tRNA_bind	PF01588.15	gi|429216709|ref|YP_007174699.1|	-	1.2e-28	98.7	0.0	1.4e-28	98.5	0.0	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
SHS2_Rpb7-N	PF03876.12	gi|429216710|ref|YP_007174700.1|	-	1.9e-11	43.9	0.0	4e-11	42.8	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|429216710|ref|YP_007174700.1|	-	5e-11	42.5	0.3	7.3e-11	42.0	0.2	1.3	1	0	0	1	1	1	1	S1	RNA	binding	domain
Abhydrolase_6	PF12697.2	gi|429216711|ref|YP_007174701.1|	-	5.5e-21	75.5	0.0	7.5e-14	52.1	0.0	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|429216711|ref|YP_007174701.1|	-	2.1e-18	66.4	0.0	2.6e-18	66.1	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|429216711|ref|YP_007174701.1|	-	6.2e-18	65.1	0.2	9.7e-11	41.6	0.1	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Peptidase_S9	PF00326.16	gi|429216711|ref|YP_007174701.1|	-	8e-05	21.9	1.1	0.065	12.4	1.1	2.3	1	1	1	2	2	2	2	Prolyl	oligopeptidase	family
Abhydrolase_2	PF02230.11	gi|429216711|ref|YP_007174701.1|	-	0.00014	21.3	0.0	0.00016	21.1	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_4	PF08386.5	gi|429216711|ref|YP_007174701.1|	-	0.001	18.9	0.0	0.0049	16.7	0.0	1.8	2	0	0	2	2	2	1	TAP-like	protein
PhoPQ_related	PF10142.4	gi|429216711|ref|YP_007174701.1|	-	0.0014	17.1	0.2	0.0028	16.2	0.1	1.4	1	1	1	2	2	2	1	PhoPQ-activated	pathogenicity-related	protein
DLH	PF01738.13	gi|429216711|ref|YP_007174701.1|	-	0.0021	17.3	0.0	0.0028	16.9	0.0	1.1	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
FSH1	PF03959.8	gi|429216711|ref|YP_007174701.1|	-	0.0039	16.6	0.0	0.0056	16.1	0.0	1.2	1	0	0	1	1	1	1	Serine	hydrolase	(FSH1)
Ndr	PF03096.9	gi|429216711|ref|YP_007174701.1|	-	0.0046	15.4	0.0	0.0075	14.7	0.0	1.3	1	0	0	1	1	1	1	Ndr	family
DUF1057	PF06342.7	gi|429216711|ref|YP_007174701.1|	-	0.037	12.8	0.0	0.051	12.3	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Hydrolase_4	PF12146.3	gi|429216711|ref|YP_007174701.1|	-	0.05	13.4	0.0	0.09	12.6	0.0	1.5	1	0	0	1	1	1	0	Putative	lysophospholipase
Acyl_transf_1	PF00698.16	gi|429216711|ref|YP_007174701.1|	-	0.069	12.4	0.3	0.097	11.9	0.2	1.1	1	0	0	1	1	1	0	Acyl	transferase	domain
Esterase	PF00756.15	gi|429216711|ref|YP_007174701.1|	-	0.11	11.8	0.5	0.24	10.7	0.1	1.8	2	1	0	2	2	2	0	Putative	esterase
Met_10	PF02475.11	gi|429216712|ref|YP_007174702.1|	-	7.7e-59	198.6	0.7	1.1e-58	198.1	0.5	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.5	gi|429216712|ref|YP_007174702.1|	-	1.1e-05	25.0	0.1	1.8e-05	24.3	0.1	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TRM	PF02005.11	gi|429216712|ref|YP_007174702.1|	-	0.00014	20.8	0.1	0.00015	20.7	0.1	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
PrmA	PF06325.8	gi|429216712|ref|YP_007174702.1|	-	0.001	18.3	0.0	0.0013	17.9	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|429216712|ref|YP_007174702.1|	-	0.0044	16.4	0.0	0.0094	15.3	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|429216712|ref|YP_007174702.1|	-	0.026	14.5	0.0	0.07	13.1	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429216712|ref|YP_007174702.1|	-	0.1	13.2	0.0	0.19	12.3	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
TYW3	PF02676.9	gi|429216713|ref|YP_007174703.1|	-	2e-32	111.9	0.2	2.4e-32	111.7	0.2	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
DNA_primase_lrg	PF04104.9	gi|429216714|ref|YP_007174704.1|	-	1.4e-09	37.6	0.3	3.4e-09	36.3	0.2	1.6	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
MmgE_PrpD	PF03972.9	gi|429216715|ref|YP_007174705.1|	-	2.7e-134	447.7	0.0	3.2e-134	447.4	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
BLOC1_2	PF10046.4	gi|429216716|ref|YP_007174706.1|	-	0.0021	18.1	0.2	0.0021	18.1	0.1	2.2	3	0	0	3	3	3	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Ni_hydr_CYTB	PF01292.15	gi|429216716|ref|YP_007174706.1|	-	0.18	11.1	0.2	0.87	8.9	0.1	1.9	2	0	0	2	2	2	0	Prokaryotic	cytochrome	b561
CTP-dep_RFKase	PF01982.11	gi|429216717|ref|YP_007174707.1|	-	3e-32	110.7	0.1	3.4e-32	110.5	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
Acyl-CoA_dh_1	PF00441.19	gi|429216718|ref|YP_007174708.1|	-	7.3e-31	107.3	0.5	1.3e-30	106.5	0.3	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|429216718|ref|YP_007174708.1|	-	7e-24	84.5	0.1	3.7e-23	82.2	0.0	2.2	1	1	1	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|429216718|ref|YP_007174708.1|	-	3.5e-14	53.2	0.1	5.5e-14	52.5	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|429216718|ref|YP_007174708.1|	-	3.2e-11	42.5	0.1	6.6e-11	41.5	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
HMG-CoA_red	PF00368.13	gi|429216721|ref|YP_007174711.1|	-	8.7e-131	435.9	0.0	1e-130	435.7	0.0	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF35_N	PF12172.3	gi|429216722|ref|YP_007174712.1|	-	4.3e-10	39.1	0.3	6.8e-10	38.5	0.2	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|429216722|ref|YP_007174712.1|	-	1.3e-06	28.5	0.0	1.8e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|429216722|ref|YP_007174712.1|	-	0.016	15.0	2.2	0.027	14.3	1.5	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|429216722|ref|YP_007174712.1|	-	0.026	13.7	7.4	0.043	13.0	5.2	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|429216722|ref|YP_007174712.1|	-	0.055	13.1	2.9	0.41	10.3	0.2	2.6	3	0	0	3	3	3	0	Nudix	N-terminal
Zn_Tnp_IS1595	PF12760.2	gi|429216722|ref|YP_007174712.1|	-	0.17	11.7	4.4	0.89	9.4	0.1	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
NRDD	PF13597.1	gi|429216722|ref|YP_007174712.1|	-	0.23	9.5	0.6	0.3	9.1	0.4	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
DUF2072	PF09845.4	gi|429216722|ref|YP_007174712.1|	-	0.26	11.2	1.6	0.24	11.3	0.3	1.5	2	0	0	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
TF_Zn_Ribbon	PF08271.7	gi|429216722|ref|YP_007174712.1|	-	0.4	10.0	2.5	1.2	8.4	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|429216722|ref|YP_007174712.1|	-	0.45	10.0	8.3	1.3	8.6	5.7	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|429216722|ref|YP_007174712.1|	-	0.46	10.1	2.3	5.5	6.7	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-CHCC	PF10276.4	gi|429216722|ref|YP_007174712.1|	-	1.4	8.7	5.2	1	9.2	0.3	2.5	3	0	0	3	3	3	0	Zinc-finger	domain
ACP_syn_III	PF08545.5	gi|429216723|ref|YP_007174713.1|	-	3.5e-10	39.3	0.1	2.9e-06	26.8	0.0	2.5	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_C	PF02803.13	gi|429216723|ref|YP_007174713.1|	-	4.8e-06	26.0	0.0	1.2e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
Chal_sti_synt_N	PF00195.14	gi|429216723|ref|YP_007174713.1|	-	6e-05	22.3	0.1	0.00023	20.4	0.0	1.8	2	0	0	2	2	2	1	Chalcone	and	stilbene	synthases,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|429216723|ref|YP_007174713.1|	-	0.00011	21.8	0.0	0.00051	19.6	0.0	1.9	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
Thiolase_N	PF00108.18	gi|429216723|ref|YP_007174713.1|	-	0.011	14.7	0.1	0.078	11.9	0.0	2.0	2	0	0	2	2	2	0	Thiolase,	N-terminal	domain
FAE1_CUT1_RppA	PF08392.7	gi|429216723|ref|YP_007174713.1|	-	0.014	14.4	0.2	0.043	12.9	0.0	1.8	2	0	0	2	2	2	0	FAE1/Type	III	polyketide	synthase-like	protein
Hydrolase_6	PF13344.1	gi|429216723|ref|YP_007174713.1|	-	0.14	12.0	0.1	0.32	10.9	0.0	1.6	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
ACP_syn_III_C	PF08541.5	gi|429216724|ref|YP_007174714.1|	-	8.2e-11	41.7	0.0	2e-10	40.5	0.0	1.7	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_C	PF08540.5	gi|429216724|ref|YP_007174714.1|	-	5.8e-05	22.6	0.1	0.0052	16.3	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
ACP_syn_III	PF08545.5	gi|429216724|ref|YP_007174714.1|	-	0.0062	16.1	1.5	0.014	15.0	1.0	1.6	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|429216724|ref|YP_007174714.1|	-	0.012	14.5	0.0	0.095	11.6	0.1	2.0	2	0	0	2	2	2	0	Thiolase,	N-terminal	domain
DUF4357	PF14267.1	gi|429216724|ref|YP_007174714.1|	-	0.1	12.2	0.1	0.29	10.7	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4357)
ALIX_LYPXL_bnd	PF13949.1	gi|429216725|ref|YP_007174715.1|	-	9.8e-06	24.7	4.8	9.8e-06	24.7	3.3	1.5	2	0	0	2	2	1	1	ALIX	V-shaped	domain	binding	to	HIV
Reo_sigmaC	PF04582.7	gi|429216725|ref|YP_007174715.1|	-	1.4e-05	24.4	0.4	2e-05	23.9	0.3	1.2	1	0	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
Seryl_tRNA_N	PF02403.17	gi|429216725|ref|YP_007174715.1|	-	0.00014	21.8	9.9	0.00014	21.8	6.8	2.1	2	0	0	2	2	1	1	Seryl-tRNA	synthetase	N-terminal	domain
RmuC	PF02646.11	gi|429216725|ref|YP_007174715.1|	-	0.00022	20.1	4.6	0.0021	16.9	2.4	2.1	1	1	1	2	2	2	2	RmuC	family
Prominin	PF05478.6	gi|429216725|ref|YP_007174715.1|	-	0.0012	16.4	5.3	0.0019	15.8	3.7	1.2	1	0	0	1	1	1	1	Prominin
APG6	PF04111.7	gi|429216725|ref|YP_007174715.1|	-	0.0014	17.7	10.9	0.0023	17.0	7.6	1.3	1	0	0	1	1	1	1	Autophagy	protein	Apg6
ThylakoidFormat	PF11264.3	gi|429216725|ref|YP_007174715.1|	-	0.002	17.7	0.2	0.002	17.7	0.1	2.2	1	1	1	2	2	2	1	Thylakoid	formation	protein
DUF1664	PF07889.7	gi|429216725|ref|YP_007174715.1|	-	0.0041	16.9	12.5	0.039	13.7	3.3	2.8	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF1664)
DUF948	PF06103.6	gi|429216725|ref|YP_007174715.1|	-	0.0045	16.8	10.7	0.011	15.6	1.2	3.1	2	1	1	3	3	3	1	Bacterial	protein	of	unknown	function	(DUF948)
zf-C4H2	PF10146.4	gi|429216725|ref|YP_007174715.1|	-	0.0051	16.8	9.0	0.026	14.5	5.9	2.0	2	0	0	2	2	2	1	Zinc	finger-containing	protein
Rootletin	PF15035.1	gi|429216725|ref|YP_007174715.1|	-	0.0092	15.9	7.2	0.0092	15.9	5.0	1.5	2	0	0	2	2	1	1	Ciliary	rootlet	component,	centrosome	cohesion
CHDCT2	PF08074.6	gi|429216725|ref|YP_007174715.1|	-	0.0094	15.6	0.9	0.015	15.0	0.6	1.3	1	0	0	1	1	1	1	CHDCT2	(NUC038)	domain
EzrA	PF06160.7	gi|429216725|ref|YP_007174715.1|	-	0.011	13.9	10.3	0.018	13.2	6.5	1.8	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
Baculo_PEP_C	PF04513.7	gi|429216725|ref|YP_007174715.1|	-	0.012	15.4	5.5	0.012	15.4	3.8	1.5	2	0	0	2	2	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Dor1	PF04124.7	gi|429216725|ref|YP_007174715.1|	-	0.015	13.8	4.0	0.028	12.8	2.8	1.5	1	0	0	1	1	1	0	Dor1-like	family
Nup88	PF10168.4	gi|429216725|ref|YP_007174715.1|	-	0.016	13.1	9.6	0.022	12.6	6.7	1.2	1	0	0	1	1	1	0	Nuclear	pore	component
Snapin_Pallidin	PF14712.1	gi|429216725|ref|YP_007174715.1|	-	0.018	15.3	5.7	0.018	15.3	4.0	2.7	2	1	0	2	2	1	0	Snapin/Pallidin
TMPIT	PF07851.8	gi|429216725|ref|YP_007174715.1|	-	0.019	14.0	5.2	0.034	13.2	3.6	1.4	1	0	0	1	1	1	0	TMPIT-like	protein
LOH1CR12	PF10158.4	gi|429216725|ref|YP_007174715.1|	-	0.021	14.6	2.3	0.081	12.7	0.9	2.0	1	1	1	2	2	2	0	Tumour	suppressor	protein
V_ATPase_I	PF01496.14	gi|429216725|ref|YP_007174715.1|	-	0.03	12.1	6.5	0.034	12.0	4.5	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Laminin_I	PF06008.9	gi|429216725|ref|YP_007174715.1|	-	0.033	13.4	8.8	0.044	13.1	6.1	1.2	1	0	0	1	1	1	0	Laminin	Domain	I
DUF972	PF06156.8	gi|429216725|ref|YP_007174715.1|	-	0.035	14.4	12.3	0.049	13.9	6.8	2.4	2	1	0	2	2	1	0	Protein	of	unknown	function	(DUF972)
Nup54	PF13874.1	gi|429216725|ref|YP_007174715.1|	-	0.04	13.5	10.0	0.014	15.0	4.9	1.7	2	0	0	2	2	1	0	Nucleoporin	complex	subunit	54
PHTB1_C	PF14728.1	gi|429216725|ref|YP_007174715.1|	-	0.041	12.6	2.5	0.057	12.2	1.7	1.2	1	0	0	1	1	1	0	PTHB1	C-terminus
TBPIP	PF07106.8	gi|429216725|ref|YP_007174715.1|	-	0.043	13.3	16.1	0.024	14.1	8.3	2.4	2	1	1	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
NPV_P10	PF05531.7	gi|429216725|ref|YP_007174715.1|	-	0.044	14.0	6.3	7.6	6.8	3.3	3.5	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF960	PF06124.6	gi|429216725|ref|YP_007174715.1|	-	0.048	13.9	0.8	0.1	12.8	0.3	1.7	1	1	0	1	1	1	0	Staphylococcal	protein	of	unknown	function	(DUF960)
DASH_Dad3	PF08656.5	gi|429216725|ref|YP_007174715.1|	-	0.051	13.2	0.8	0.051	13.2	0.6	2.8	2	1	2	4	4	3	0	DASH	complex	subunit	Dad3
DUF4200	PF13863.1	gi|429216725|ref|YP_007174715.1|	-	0.057	13.3	13.3	0.65	9.9	2.4	2.9	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF4200)
CP12	PF02672.10	gi|429216725|ref|YP_007174715.1|	-	0.069	13.6	6.2	2	8.9	1.0	2.9	1	1	2	3	3	3	0	CP12	domain
TFR_dimer	PF04253.10	gi|429216725|ref|YP_007174715.1|	-	0.083	12.4	3.7	0.14	11.7	0.2	2.3	1	1	1	2	2	2	0	Transferrin	receptor-like	dimerisation	domain
CENP-F_leu_zip	PF10473.4	gi|429216725|ref|YP_007174715.1|	-	0.086	12.7	16.3	0.072	12.9	9.5	2.0	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
LemA	PF04011.7	gi|429216725|ref|YP_007174715.1|	-	0.11	11.6	8.1	0.011	14.8	2.8	1.5	2	0	0	2	2	1	0	LemA	family
Syntaxin-6_N	PF09177.6	gi|429216725|ref|YP_007174715.1|	-	0.12	12.7	8.7	0.22	11.9	3.8	2.6	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
AAA_13	PF13166.1	gi|429216725|ref|YP_007174715.1|	-	0.13	10.7	15.1	0.1	11.0	9.1	1.6	1	1	1	2	2	2	0	AAA	domain
MCPsignal	PF00015.16	gi|429216725|ref|YP_007174715.1|	-	0.15	11.5	3.2	0.092	12.2	1.0	1.5	2	0	0	2	2	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Spc7	PF08317.6	gi|429216725|ref|YP_007174715.1|	-	0.17	10.4	16.6	0.032	12.8	9.1	1.5	2	0	0	2	2	2	0	Spc7	kinetochore	protein
ADIP	PF11559.3	gi|429216725|ref|YP_007174715.1|	-	0.18	11.6	10.6	0.038	13.9	5.0	1.6	2	0	0	2	2	1	0	Afadin-	and	alpha	-actinin-Binding
TMF_TATA_bd	PF12325.3	gi|429216725|ref|YP_007174715.1|	-	0.23	11.1	12.3	0.068	12.8	6.0	1.9	2	1	0	2	2	1	0	TATA	element	modulatory	factor	1	TATA	binding
IncA	PF04156.9	gi|429216725|ref|YP_007174715.1|	-	0.27	10.8	12.3	0.07	12.7	6.5	1.6	2	0	0	2	2	1	0	IncA	protein
Bacillus_HBL	PF05791.6	gi|429216725|ref|YP_007174715.1|	-	0.28	10.5	7.7	0.12	11.7	3.6	1.7	2	0	0	2	2	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
GAT	PF03127.9	gi|429216725|ref|YP_007174715.1|	-	0.3	11.0	5.3	1.9	8.5	3.7	2.1	1	1	0	1	1	1	0	GAT	domain
DivIC	PF04977.10	gi|429216725|ref|YP_007174715.1|	-	0.42	10.1	17.0	0.79	9.2	3.2	3.2	2	1	1	3	3	3	0	Septum	formation	initiator
FlaC_arch	PF05377.6	gi|429216725|ref|YP_007174715.1|	-	0.46	10.4	14.1	9.6	6.1	3.2	3.9	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
BCAS2	PF05700.6	gi|429216725|ref|YP_007174715.1|	-	0.46	9.9	10.5	0.85	9.0	7.3	1.5	1	0	0	1	1	1	0	Breast	carcinoma	amplified	sequence	2	(BCAS2)
Syntaxin	PF00804.20	gi|429216725|ref|YP_007174715.1|	-	0.48	10.6	10.0	0.48	10.6	4.4	2.5	2	1	0	2	2	2	0	Syntaxin
DUF1515	PF07439.6	gi|429216725|ref|YP_007174715.1|	-	0.57	10.0	5.6	0.39	10.5	1.3	2.5	1	1	3	4	4	2	0	Protein	of	unknown	function	(DUF1515)
DUF4618	PF15397.1	gi|429216725|ref|YP_007174715.1|	-	0.62	9.3	12.5	0.34	10.2	2.1	2.5	2	1	1	3	3	2	0	Domain	of	unknown	function	(DUF4618)
Atg14	PF10186.4	gi|429216725|ref|YP_007174715.1|	-	0.65	8.8	9.7	0.64	8.9	6.3	1.4	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
SseC	PF04888.7	gi|429216725|ref|YP_007174715.1|	-	0.65	9.2	5.0	0.25	10.6	1.2	1.8	1	1	1	2	2	2	0	Secretion	system	effector	C	(SseC)	like	family
Tup_N	PF08581.5	gi|429216725|ref|YP_007174715.1|	-	0.7	10.1	7.6	0.91	9.7	1.0	2.8	2	1	1	3	3	2	0	Tup	N-terminal
Z1	PF10593.4	gi|429216725|ref|YP_007174715.1|	-	0.71	9.0	4.4	1.3	8.2	3.1	1.4	1	0	0	1	1	1	0	Z1	domain
Cauli_AT	PF03233.8	gi|429216725|ref|YP_007174715.1|	-	0.83	9.3	8.8	0.22	11.2	3.6	2.0	2	0	0	2	2	1	0	Aphid	transmission	protein
DUF4201	PF13870.1	gi|429216725|ref|YP_007174715.1|	-	0.85	9.0	16.0	0.11	11.9	7.9	1.8	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4201)
Cytochrom_C_2	PF01322.15	gi|429216725|ref|YP_007174715.1|	-	0.91	10.0	3.0	2.3	8.8	2.1	1.7	1	1	0	1	1	1	0	Cytochrome	C'
Cep57_MT_bd	PF06657.8	gi|429216725|ref|YP_007174715.1|	-	0.91	9.5	7.8	3.3	7.7	0.2	3.4	2	1	1	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
Fib_alpha	PF08702.5	gi|429216725|ref|YP_007174715.1|	-	1.1	9.3	10.7	2.1	8.4	3.7	2.5	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
TMF_DNA_bd	PF12329.3	gi|429216725|ref|YP_007174715.1|	-	1.2	8.9	19.5	0.11	12.3	7.9	3.0	2	1	2	4	4	4	0	TATA	element	modulatory	factor	1	DNA	binding
COG5	PF10392.4	gi|429216725|ref|YP_007174715.1|	-	1.3	8.9	5.2	6.3	6.7	0.3	2.7	2	1	1	3	3	3	0	Golgi	transport	complex	subunit	5
DUF2203	PF09969.4	gi|429216725|ref|YP_007174715.1|	-	1.5	9.0	8.9	1.1	9.5	1.1	2.5	2	1	1	3	3	2	0	Uncharacterized	conserved	protein	(DUF2203)
DUF1319	PF07028.6	gi|429216725|ref|YP_007174715.1|	-	1.6	8.9	11.7	17	5.6	5.8	2.8	2	1	0	2	2	1	0	Protein	of	unknown	function	(DUF1319)
CENP-H	PF05837.7	gi|429216725|ref|YP_007174715.1|	-	1.7	8.8	12.7	3.8	7.7	6.7	2.5	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
DUF4446	PF14584.1	gi|429216725|ref|YP_007174715.1|	-	1.7	8.4	8.2	1.1	9.1	0.8	2.7	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF4446)
Latarcin	PF10279.4	gi|429216725|ref|YP_007174715.1|	-	2.3	8.4	8.6	21	5.4	4.2	2.7	1	1	1	2	2	2	0	Latarcin	precursor
bZIP_1	PF00170.16	gi|429216725|ref|YP_007174715.1|	-	2.3	8.2	16.7	19	5.3	0.9	3.6	2	1	0	3	3	3	0	bZIP	transcription	factor
FlgN	PF05130.7	gi|429216725|ref|YP_007174715.1|	-	2.6	8.3	11.7	16	5.6	8.0	2.2	1	1	0	1	1	1	0	FlgN	protein
PTRF_SDPR	PF15237.1	gi|429216725|ref|YP_007174715.1|	-	2.7	7.3	11.4	0.93	8.8	1.0	2.7	2	1	1	3	3	3	0	PTRF/SDPR	family
LRR_3	PF07725.7	gi|429216725|ref|YP_007174715.1|	-	2.7	7.9	6.8	17	5.4	0.3	3.3	3	0	0	3	3	3	0	Leucine	Rich	Repeat
DivIVA	PF05103.8	gi|429216725|ref|YP_007174715.1|	-	2.9	7.9	13.1	17	5.4	7.1	2.6	2	1	0	2	2	1	0	DivIVA	protein
Laminin_II	PF06009.7	gi|429216725|ref|YP_007174715.1|	-	2.9	7.6	12.5	1.6	8.4	5.8	2.4	2	1	0	2	2	2	0	Laminin	Domain	II
Hormone_1	PF00103.15	gi|429216725|ref|YP_007174715.1|	-	3.6	6.8	6.0	5.2	6.3	1.0	2.2	1	1	1	2	2	2	0	Somatotropin	hormone	family
Prefoldin_2	PF01920.15	gi|429216725|ref|YP_007174715.1|	-	3.7	7.3	16.8	67	3.3	8.3	3.0	2	1	0	2	2	2	0	Prefoldin	subunit
CR6_interact	PF10147.4	gi|429216725|ref|YP_007174715.1|	-	3.7	6.7	12.0	0.25	10.6	4.4	1.8	2	0	0	2	2	2	0	Growth	arrest	and	DNA-damage-inducible	proteins-interacting	protein	1
Uso1_p115_C	PF04871.8	gi|429216725|ref|YP_007174715.1|	-	3.9	7.4	15.3	0.91	9.4	8.2	1.8	2	0	0	2	2	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
OmpH	PF03938.9	gi|429216725|ref|YP_007174715.1|	-	3.9	7.3	9.3	9.3	6.1	6.4	1.9	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Orthopox_A5L	PF06193.6	gi|429216725|ref|YP_007174715.1|	-	5	7.0	10.1	2.2	8.1	0.5	2.6	2	1	1	3	3	2	0	Orthopoxvirus	A5L	protein-like
Med4	PF10018.4	gi|429216725|ref|YP_007174715.1|	-	5.4	6.3	12.0	2.6	7.4	4.4	2.2	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Cren7	PF11520.3	gi|429216726|ref|YP_007174716.1|	-	1.8e-27	94.7	2.6	1.9e-27	94.6	1.8	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
Rhamnogal_lyase	PF06045.6	gi|429216727|ref|YP_007174717.1|	-	0.076	12.2	0.0	0.078	12.2	0.0	1.1	1	0	0	1	1	1	0	Rhamnogalacturonate	lyase	family
ECH	PF00378.15	gi|429216728|ref|YP_007174718.1|	-	5.5e-68	228.7	0.0	8.4e-68	228.1	0.0	1.2	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|429216728|ref|YP_007174718.1|	-	3.5e-59	199.4	0.1	1.1e-58	197.8	0.1	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|429216728|ref|YP_007174718.1|	-	2.4e-49	165.7	0.0	1.6e-25	89.2	0.0	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|429216728|ref|YP_007174718.1|	-	0.00098	18.9	0.1	0.0034	17.2	0.1	1.9	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|429216728|ref|YP_007174718.1|	-	0.005	16.5	0.2	0.021	14.5	0.1	2.0	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ECH_C	PF13766.1	gi|429216728|ref|YP_007174718.1|	-	0.013	15.6	0.0	0.034	14.2	0.0	1.7	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
2-Hacid_dh_C	PF02826.14	gi|429216728|ref|YP_007174718.1|	-	0.016	14.3	0.0	0.034	13.2	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Peptidase_S49	PF01343.13	gi|429216728|ref|YP_007174718.1|	-	0.085	12.6	0.1	7.9	6.2	0.0	2.3	2	0	0	2	2	2	0	Peptidase	family	S49
F420_oxidored	PF03807.12	gi|429216728|ref|YP_007174718.1|	-	0.1	13.0	0.7	0.33	11.3	0.5	2.0	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
tRNA_deacylase	PF04414.7	gi|429216729|ref|YP_007174719.1|	-	3.9e-66	222.2	0.1	7e-66	221.3	0.0	1.4	2	0	0	2	2	2	1	D-aminoacyl-tRNA	deacylase
KRTDAP	PF15200.1	gi|429216729|ref|YP_007174719.1|	-	0.12	12.1	0.2	2.5	7.9	0.1	2.4	2	0	0	2	2	2	0	Keratinocyte	differentiation-associated
Nfu_N	PF08712.6	gi|429216729|ref|YP_007174719.1|	-	0.2	11.3	2.2	0.21	11.2	0.1	2.1	3	0	0	3	3	3	0	Scaffold	protein	Nfu/NifU	N	terminal
Pyr_redox_2	PF07992.9	gi|429216731|ref|YP_007174721.1|	-	9.8e-32	110.4	3.9	2.9e-17	63.2	0.0	3.3	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429216731|ref|YP_007174721.1|	-	2.8e-24	85.3	6.2	8.9e-19	67.6	0.1	3.4	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|429216731|ref|YP_007174721.1|	-	6.8e-18	64.6	1.3	8.9e-05	21.5	0.0	4.1	4	0	0	4	4	4	4	FAD	dependent	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|429216731|ref|YP_007174721.1|	-	3.7e-15	55.8	0.0	8.7e-15	54.7	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|429216731|ref|YP_007174721.1|	-	9.7e-12	45.3	0.0	1.3e-06	28.6	0.0	2.9	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|429216731|ref|YP_007174721.1|	-	1e-10	40.6	0.9	0.01	14.3	0.1	4.1	3	1	0	4	4	4	3	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|429216731|ref|YP_007174721.1|	-	6.6e-08	32.4	0.1	0.00036	20.5	0.0	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
K_oxygenase	PF13434.1	gi|429216731|ref|YP_007174721.1|	-	4.3e-07	29.1	0.0	1.2e-05	24.4	0.0	2.3	2	1	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_2	PF00890.19	gi|429216731|ref|YP_007174721.1|	-	1.5e-06	27.3	3.8	0.0018	17.2	0.3	4.0	4	0	0	4	4	4	1	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|429216731|ref|YP_007174721.1|	-	4.1e-05	23.7	0.1	0.0053	16.9	0.0	2.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_9	PF13454.1	gi|429216731|ref|YP_007174721.1|	-	4.1e-05	23.3	1.0	0.73	9.5	0.0	3.2	3	0	0	3	3	3	1	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|429216731|ref|YP_007174721.1|	-	4.6e-05	22.6	3.2	0.065	12.2	0.0	2.9	2	1	0	3	3	3	2	FAD	binding	domain
TrkA_N	PF02254.13	gi|429216731|ref|YP_007174721.1|	-	0.0002	21.3	1.4	0.26	11.2	0.1	2.5	2	0	0	2	2	2	2	TrkA-N	domain
Lycopene_cycl	PF05834.7	gi|429216731|ref|YP_007174721.1|	-	0.00076	18.4	1.8	0.04	12.8	0.1	2.6	3	0	0	3	3	3	1	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.14	gi|429216731|ref|YP_007174721.1|	-	0.0052	15.9	0.6	1.7	7.7	0.0	2.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.17	gi|429216731|ref|YP_007174721.1|	-	0.0055	15.6	0.2	1.5	7.6	0.0	2.9	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
XdhC_C	PF13478.1	gi|429216731|ref|YP_007174721.1|	-	0.0067	16.7	0.0	0.29	11.4	0.0	2.4	2	0	0	2	2	2	1	XdhC	Rossmann	domain
AlaDh_PNT_C	PF01262.16	gi|429216731|ref|YP_007174721.1|	-	0.0087	15.6	0.1	0.5	9.9	0.0	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.9	gi|429216731|ref|YP_007174721.1|	-	0.036	13.4	0.0	0.087	12.2	0.0	1.7	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|429216731|ref|YP_007174721.1|	-	0.092	13.1	2.2	16	6.0	0.1	2.8	3	0	0	3	3	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.13	gi|429216731|ref|YP_007174721.1|	-	0.097	12.3	0.1	1.3	8.6	0.0	2.2	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|429216731|ref|YP_007174721.1|	-	0.15	12.0	0.0	7.4	6.5	0.0	2.5	3	0	0	3	3	2	0	NADH(P)-binding
Thi4	PF01946.12	gi|429216731|ref|YP_007174721.1|	-	0.16	11.0	1.6	4.5	6.3	0.1	2.3	2	0	0	2	2	2	0	Thi4	family
Trp_halogenase	PF04820.9	gi|429216731|ref|YP_007174721.1|	-	0.18	10.3	0.3	0.44	9.1	0.0	1.7	2	0	0	2	2	2	0	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|429216731|ref|YP_007174721.1|	-	0.22	10.5	0.4	1.8	7.5	0.2	2.1	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Shikimate_DH	PF01488.15	gi|429216731|ref|YP_007174721.1|	-	0.5	10.4	4.1	3.6	7.6	0.3	2.9	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
GATase	PF00117.23	gi|429216732|ref|YP_007174722.1|	-	3.2e-31	108.3	0.1	5.9e-31	107.4	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GMP_synt_C	PF00958.17	gi|429216732|ref|YP_007174722.1|	-	3.2e-22	78.0	0.1	7.8e-22	76.8	0.1	1.7	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|429216732|ref|YP_007174722.1|	-	8.9e-13	47.6	0.3	2e-11	43.2	0.2	2.4	1	1	0	1	1	1	1	NAD	synthase
Peptidase_C26	PF07722.8	gi|429216732|ref|YP_007174722.1|	-	3e-11	43.1	0.0	1.1e-10	41.3	0.0	1.9	1	1	0	1	1	1	1	Peptidase	C26
ThiI	PF02568.9	gi|429216732|ref|YP_007174722.1|	-	1.7e-07	30.9	0.2	0.002	17.6	0.0	2.4	2	0	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.8	gi|429216732|ref|YP_007174722.1|	-	0.00019	20.7	0.0	0.09	12.0	0.0	2.4	1	1	1	2	2	2	2	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|429216732|ref|YP_007174722.1|	-	0.0002	20.8	0.0	0.0004	19.9	0.0	1.5	1	1	0	1	1	1	1	PP-loop	family
Arginosuc_synth	PF00764.14	gi|429216732|ref|YP_007174722.1|	-	0.0017	17.5	0.0	0.0029	16.6	0.0	1.5	1	1	0	1	1	1	1	Arginosuccinate	synthase
GATase_3	PF07685.9	gi|429216732|ref|YP_007174722.1|	-	0.0073	15.9	0.0	0.017	14.7	0.0	1.6	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
tRNA_Me_trans	PF03054.11	gi|429216732|ref|YP_007174722.1|	-	0.065	11.7	0.1	0.37	9.3	0.1	2.0	2	0	0	2	2	2	0	tRNA	methyl	transferase
Adenine_deam_C	PF13382.1	gi|429216733|ref|YP_007174723.1|	-	7.6e-60	200.9	0.4	1.4e-59	200.0	0.2	1.5	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.15	gi|429216733|ref|YP_007174723.1|	-	3.9e-29	102.3	0.7	1.9e-27	96.8	0.5	2.5	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|429216733|ref|YP_007174723.1|	-	3e-12	47.1	0.0	1.6e-05	25.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|429216733|ref|YP_007174723.1|	-	6.1e-12	45.1	0.3	2.5e-11	43.2	0.2	2.2	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|429216733|ref|YP_007174723.1|	-	2.2e-08	33.7	0.0	0.0013	18.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
IMPDH	PF00478.20	gi|429216734|ref|YP_007174724.1|	-	1e-102	343.6	4.3	1.2e-102	343.4	3.0	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.10	gi|429216734|ref|YP_007174724.1|	-	2.7e-08	33.3	4.4	0.00067	18.8	0.5	2.7	2	1	0	2	2	2	2	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|429216734|ref|YP_007174724.1|	-	7.1e-07	28.3	0.5	1.5e-06	27.3	0.3	1.5	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Glu_synthase	PF01645.12	gi|429216734|ref|YP_007174724.1|	-	9e-05	21.5	3.5	0.00016	20.7	2.4	1.3	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|429216734|ref|YP_007174724.1|	-	0.00054	19.0	6.0	0.0014	17.7	4.2	1.8	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
PcrB	PF01884.12	gi|429216734|ref|YP_007174724.1|	-	0.0013	17.9	6.6	0.035	13.3	0.3	2.9	3	1	0	3	3	3	2	PcrB	family
His_biosynth	PF00977.16	gi|429216734|ref|YP_007174724.1|	-	0.0016	17.7	0.7	0.14	11.4	0.1	2.4	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|429216734|ref|YP_007174724.1|	-	0.0028	16.7	0.1	0.0063	15.6	0.1	1.6	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.12	gi|429216734|ref|YP_007174724.1|	-	0.026	13.3	0.1	0.25	10.1	0.0	2.3	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
zf-FPG_IleRS	PF06827.9	gi|429216735|ref|YP_007174725.1|	-	0.00056	19.4	3.3	0.098	12.3	0.1	3.0	3	0	0	3	3	3	1	Zinc	finger	found	in	FPG	and	IleRS
Rubredoxin	PF00301.15	gi|429216735|ref|YP_007174725.1|	-	0.0028	17.5	0.1	1.4	8.8	0.0	2.2	2	0	0	2	2	2	1	Rubredoxin
zf-ISL3	PF14690.1	gi|429216735|ref|YP_007174725.1|	-	0.01	15.8	2.5	1.2	9.2	0.2	2.3	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DZR	PF12773.2	gi|429216735|ref|YP_007174725.1|	-	0.025	14.3	0.8	0.084	12.7	0.5	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
Prok-RING_4	PF14447.1	gi|429216735|ref|YP_007174725.1|	-	0.026	14.0	1.3	0.13	11.7	0.1	2.1	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	4
Nairovirus_M	PF07948.6	gi|429216735|ref|YP_007174725.1|	-	0.027	12.6	0.5	0.031	12.4	0.3	1.0	1	0	0	1	1	1	0	Nairovirus	M	polyprotein-like
Vps39_2	PF10367.4	gi|429216735|ref|YP_007174725.1|	-	0.03	14.4	0.4	0.054	13.6	0.3	1.5	1	1	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
GFA	PF04828.9	gi|429216735|ref|YP_007174725.1|	-	0.046	13.6	0.7	0.51	10.3	0.0	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
Zn-ribbon_8	PF09723.5	gi|429216735|ref|YP_007174725.1|	-	0.079	12.9	0.3	14	5.7	0.0	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
Elf1	PF05129.8	gi|429216735|ref|YP_007174725.1|	-	0.086	12.5	0.8	0.56	9.9	0.0	2.1	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
Auto_anti-p27	PF06677.7	gi|429216735|ref|YP_007174725.1|	-	0.097	12.4	1.8	0.95	9.2	0.1	2.3	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TF_Zn_Ribbon	PF08271.7	gi|429216735|ref|YP_007174725.1|	-	0.1	11.9	3.6	2.3	7.5	0.5	2.5	2	1	0	2	2	2	0	TFIIB	zinc-binding
zf-Di19	PF05605.7	gi|429216735|ref|YP_007174725.1|	-	0.11	12.6	0.1	2.5	8.3	0.0	2.1	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-ribbon_3	PF13248.1	gi|429216735|ref|YP_007174725.1|	-	0.11	11.6	0.7	4.4	6.6	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429216735|ref|YP_007174725.1|	-	0.12	11.9	0.4	3.6	7.1	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
CcmH	PF03918.9	gi|429216735|ref|YP_007174725.1|	-	0.15	11.0	0.2	0.29	10.1	0.1	1.5	1	1	1	2	2	2	0	Cytochrome	C	biogenesis	protein
zinc-ribbons_6	PF07191.7	gi|429216735|ref|YP_007174725.1|	-	0.16	11.8	0.4	0.47	10.2	0.3	1.8	1	1	2	3	3	3	0	zinc-ribbons
Lar_restr_allev	PF14354.1	gi|429216735|ref|YP_007174725.1|	-	0.18	12.1	0.6	5.9	7.2	0.1	2.2	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-C3HC4_3	PF13920.1	gi|429216735|ref|YP_007174725.1|	-	0.21	11.3	1.6	5.2	6.8	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
TFIIS_C	PF01096.13	gi|429216735|ref|YP_007174725.1|	-	0.22	11.1	1.0	3.5	7.3	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Zn_ribbon_recom	PF13408.1	gi|429216735|ref|YP_007174725.1|	-	0.25	11.6	4.0	0.48	10.7	2.8	1.4	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Sgf11	PF08209.6	gi|429216735|ref|YP_007174725.1|	-	0.56	9.5	4.4	0.37	10.1	0.6	2.0	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Zn_Tnp_IS1	PF03811.8	gi|429216735|ref|YP_007174725.1|	-	0.7	9.4	4.9	10	5.6	3.4	2.1	1	1	0	1	1	1	0	InsA	N-terminal	domain
zf-HIT	PF04438.11	gi|429216735|ref|YP_007174725.1|	-	1.1	9.0	5.4	9.6	5.9	0.8	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
Ogr_Delta	PF04606.7	gi|429216735|ref|YP_007174725.1|	-	1.2	8.8	4.4	3.1	7.5	3.1	1.7	1	1	0	1	1	1	0	Ogr/Delta-like	zinc	finger
zf-TFIIB	PF13453.1	gi|429216735|ref|YP_007174725.1|	-	1.5	8.0	5.1	8.3	5.7	3.6	2.0	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
DUF3797	PF12677.2	gi|429216735|ref|YP_007174725.1|	-	1.6	8.4	3.8	1.1	8.9	0.5	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Rad50_zn_hook	PF04423.9	gi|429216735|ref|YP_007174725.1|	-	1.7	8.1	7.5	0.25	10.8	0.4	2.6	2	1	0	3	3	3	0	Rad50	zinc	hook	motif
Cys_rich_KTR	PF14205.1	gi|429216735|ref|YP_007174725.1|	-	2.3	7.7	4.9	9.8	5.7	0.3	2.6	2	1	0	2	2	2	0	Cysteine-rich	KTR
zf-CCHC_5	PF14787.1	gi|429216735|ref|YP_007174725.1|	-	3.1	7.3	6.3	3.5	7.1	0.3	2.3	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
zf-GRF	PF06839.7	gi|429216735|ref|YP_007174725.1|	-	3.3	7.7	5.3	6.7	6.7	3.6	1.6	1	1	0	1	1	1	0	GRF	zinc	finger
Endonuclease_5	PF04493.9	gi|429216736|ref|YP_007174726.1|	-	4.6e-43	146.9	0.1	6.6e-43	146.4	0.0	1.2	1	0	0	1	1	1	1	Endonuclease	V
Proteasome	PF00227.21	gi|429216737|ref|YP_007174727.1|	-	3.6e-52	176.4	1.4	4.1e-52	176.2	0.9	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Spt5-NGN	PF03439.8	gi|429216738|ref|YP_007174728.1|	-	2.7e-12	46.2	0.1	4.3e-12	45.6	0.1	1.3	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|429216738|ref|YP_007174728.1|	-	2.8e-06	26.8	1.3	4.3e-06	26.2	0.2	1.9	2	0	0	2	2	2	1	KOW	motif
YxiJ	PF14176.1	gi|429216741|ref|YP_007174731.1|	-	0.28	11.3	2.6	0.53	10.4	1.3	1.9	1	1	0	1	1	1	0	YxiJ-like	protein
Med2	PF11214.3	gi|429216741|ref|YP_007174731.1|	-	4	7.5	9.1	0.42	10.6	1.2	2.5	1	1	1	2	2	2	0	Mediator	complex	subunit	2
PRA1	PF03208.14	gi|429216742|ref|YP_007174732.1|	-	8.5	5.6	10.1	11	5.3	7.0	1.1	1	0	0	1	1	1	0	PRA1	family	protein
AAA_5	PF07728.9	gi|429216743|ref|YP_007174733.1|	-	4e-15	55.7	0.7	1.9e-14	53.5	0.0	2.4	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|429216743|ref|YP_007174733.1|	-	0.00023	21.3	1.7	0.0018	18.4	0.0	3.1	4	0	0	4	4	4	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|429216743|ref|YP_007174733.1|	-	0.0056	15.8	0.0	0.012	14.8	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
PIF1	PF05970.9	gi|429216743|ref|YP_007174733.1|	-	0.014	14.3	0.1	0.014	14.3	0.1	2.1	1	1	1	2	2	2	0	PIF1-like	helicase
MCM	PF00493.18	gi|429216743|ref|YP_007174733.1|	-	0.014	14.1	0.3	0.047	12.4	0.2	1.9	1	1	0	1	1	1	0	MCM2/3/5	family
AAA_25	PF13481.1	gi|429216743|ref|YP_007174733.1|	-	0.032	13.6	0.0	0.13	11.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
TyeA	PF09059.5	gi|429216743|ref|YP_007174733.1|	-	0.05	13.5	0.1	4.2	7.3	0.0	2.9	1	1	1	2	2	2	0	TyeA
AAA_16	PF13191.1	gi|429216743|ref|YP_007174733.1|	-	0.056	13.4	0.0	0.18	11.7	0.0	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|429216743|ref|YP_007174733.1|	-	0.058	13.5	0.1	0.32	11.1	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
ATP-synt_G	PF04718.10	gi|429216743|ref|YP_007174733.1|	-	0.058	14.0	0.9	0.32	11.6	0.0	2.5	2	1	0	2	2	2	0	Mitochondrial	ATP	synthase	g	subunit
IstB_IS21	PF01695.12	gi|429216743|ref|YP_007174733.1|	-	0.067	12.6	0.0	3.7	6.9	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|429216743|ref|YP_007174733.1|	-	0.11	11.4	0.2	0.39	9.5	0.2	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
DUF4635	PF15466.1	gi|429216743|ref|YP_007174733.1|	-	0.12	11.6	2.2	1.4	8.2	0.2	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4635)
ETRAMP	PF09716.5	gi|429216743|ref|YP_007174733.1|	-	7.5	6.5	10.2	14	5.7	0.1	3.9	3	0	0	3	3	3	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Spore_III_AB	PF09548.5	gi|429216745|ref|YP_007174735.1|	-	0.0067	16.1	2.8	0.43	10.3	1.3	2.2	2	0	0	2	2	2	1	Stage	III	sporulation	protein	AB	(spore_III_AB)
DUF4468	PF14730.1	gi|429216745|ref|YP_007174735.1|	-	0.1	12.3	1.9	1.3	8.7	0.4	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
MutS_III	PF05192.13	gi|429216745|ref|YP_007174735.1|	-	0.15	11.7	2.2	0.27	10.9	1.6	1.5	1	1	0	1	1	1	0	MutS	domain	III
Glypican	PF01153.14	gi|429216745|ref|YP_007174735.1|	-	0.18	10.3	1.2	0.25	9.8	0.8	1.2	1	0	0	1	1	1	0	Glypican
TMPIT	PF07851.8	gi|429216745|ref|YP_007174735.1|	-	0.22	10.5	3.7	0.23	10.5	2.6	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
MSA-2c	PF12238.3	gi|429216745|ref|YP_007174735.1|	-	0.81	9.3	6.9	0.69	9.5	3.2	1.9	1	1	1	2	2	2	0	Merozoite	surface	antigen	2c
Ycf54	PF10674.4	gi|429216745|ref|YP_007174735.1|	-	3.1	7.9	6.2	3.5	7.8	2.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2488)
Fib_alpha	PF08702.5	gi|429216745|ref|YP_007174735.1|	-	3.1	7.8	5.9	14	5.7	3.6	2.2	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
BACK	PF07707.10	gi|429216745|ref|YP_007174735.1|	-	4.5	7.1	8.8	4.7	7.1	1.9	2.8	1	1	2	3	3	3	0	BTB	And	C-terminal	Kelch
DrsE	PF02635.10	gi|429216746|ref|YP_007174736.1|	-	4e-17	62.4	0.0	4.4e-17	62.2	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|429216746|ref|YP_007174736.1|	-	2e-05	24.3	0.1	2.3e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
CW_binding_2	PF04122.7	gi|429216746|ref|YP_007174736.1|	-	0.0062	16.7	0.1	0.0079	16.3	0.1	1.3	1	0	0	1	1	1	1	Putative	cell	wall	binding	repeat	2
AroM	PF07302.6	gi|429216746|ref|YP_007174736.1|	-	0.032	13.5	0.0	0.037	13.3	0.0	1.1	1	0	0	1	1	1	0	AroM	protein
Cobl	PF09469.5	gi|429216746|ref|YP_007174736.1|	-	0.08	12.9	2.8	0.14	12.1	0.8	2.2	2	1	0	2	2	2	0	Cordon-bleu	ubiquitin-like	domain
Abi	PF02517.11	gi|429216747|ref|YP_007174737.1|	-	5.1	7.3	9.7	0.82	9.8	0.9	2.2	1	1	1	2	2	2	0	CAAX	protease	self-immunity
Fe-ADH	PF00465.14	gi|429216748|ref|YP_007174738.1|	-	2e-74	250.4	0.0	2.4e-74	250.1	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|429216748|ref|YP_007174738.1|	-	3.6e-10	39.5	0.0	1.5e-09	37.5	0.0	1.8	2	0	0	2	2	2	1	Iron-containing	alcohol	dehydrogenase
EFP	PF01132.15	gi|429216748|ref|YP_007174738.1|	-	0.13	11.9	0.0	0.4	10.3	0.0	1.8	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
DHQ_synthase	PF01761.15	gi|429216748|ref|YP_007174738.1|	-	0.13	11.1	0.3	0.28	10.0	0.1	1.6	2	0	0	2	2	2	0	3-dehydroquinate	synthase
Elf1	PF05129.8	gi|429216749|ref|YP_007174739.1|	-	8.2e-17	60.6	0.8	8.2e-17	60.6	0.6	1.4	2	0	0	2	2	2	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|429216749|ref|YP_007174739.1|	-	0.019	15.2	3.2	0.042	14.1	2.2	1.8	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-CSL	PF05207.8	gi|429216749|ref|YP_007174739.1|	-	0.027	13.9	0.5	0.075	12.5	0.3	1.8	1	0	0	1	1	1	0	CSL	zinc	finger
TF_Zn_Ribbon	PF08271.7	gi|429216749|ref|YP_007174739.1|	-	0.045	13.0	3.2	0.061	12.6	0.0	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-TFIIB	PF13453.1	gi|429216749|ref|YP_007174739.1|	-	0.046	12.9	0.7	0.09	11.9	0.5	1.5	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Cytochrome_C7	PF14522.1	gi|429216749|ref|YP_007174739.1|	-	0.046	13.3	0.0	0.067	12.8	0.0	1.5	1	1	0	1	1	1	0	Cytochrome	c7
Zn_Tnp_IS1595	PF12760.2	gi|429216749|ref|YP_007174739.1|	-	1.3	8.8	5.4	3.9	7.3	3.0	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
PcrB	PF01884.12	gi|429216750|ref|YP_007174740.1|	-	7.2e-64	215.2	0.0	9.3e-64	214.8	0.0	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|429216750|ref|YP_007174740.1|	-	5.6e-05	22.5	0.0	0.00011	21.5	0.0	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|429216750|ref|YP_007174740.1|	-	0.00042	19.3	0.0	0.013	14.4	0.0	2.2	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Ribul_P_3_epim	PF00834.14	gi|429216750|ref|YP_007174740.1|	-	0.00053	19.1	0.0	0.0013	17.8	0.0	1.6	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
DHO_dh	PF01180.16	gi|429216750|ref|YP_007174740.1|	-	0.015	14.2	0.1	0.025	13.5	0.1	1.3	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
GDPD_2	PF13653.1	gi|429216750|ref|YP_007174740.1|	-	0.027	14.6	0.0	0.062	13.5	0.0	1.6	1	0	0	1	1	1	0	Glycerophosphoryl	diester	phosphodiesterase	family
Trp_syntA	PF00290.15	gi|429216750|ref|YP_007174740.1|	-	0.031	12.8	0.0	0.064	11.7	0.0	1.5	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
Peripla_BP_4	PF13407.1	gi|429216750|ref|YP_007174740.1|	-	0.042	13.2	0.1	2.5	7.3	0.0	2.1	1	1	0	2	2	2	0	Periplasmic	binding	protein	domain
ThiG	PF05690.9	gi|429216750|ref|YP_007174740.1|	-	0.078	12.0	0.1	0.21	10.6	0.0	1.8	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Sec61_beta	PF03911.11	gi|429216751|ref|YP_007174741.1|	-	2.5e-11	43.1	1.4	2.9e-11	42.9	1.0	1.1	1	0	0	1	1	1	1	Sec61beta	family
SWIM	PF04434.12	gi|429216752|ref|YP_007174742.1|	-	0.0014	18.0	0.1	0.0022	17.4	0.0	1.4	1	0	0	1	1	1	1	SWIM	zinc	finger
Rib_5-P_isom_A	PF06026.9	gi|429216753|ref|YP_007174743.1|	-	1.6e-45	154.5	0.0	1.9e-45	154.2	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sugar-bind	PF04198.8	gi|429216753|ref|YP_007174743.1|	-	0.0068	15.3	0.0	0.0092	14.9	0.0	1.2	1	0	0	1	1	1	1	Putative	sugar-binding	domain
LEM	PF03020.10	gi|429216753|ref|YP_007174743.1|	-	0.039	13.3	0.0	0.079	12.4	0.0	1.5	1	0	0	1	1	1	0	LEM	domain
CBS	PF00571.23	gi|429216754|ref|YP_007174744.1|	-	1.8e-25	88.4	0.0	2.3e-11	43.2	0.0	2.3	2	1	0	2	2	2	2	CBS	domain
Redoxin	PF08534.5	gi|429216754|ref|YP_007174744.1|	-	0.13	11.7	0.1	0.21	11.1	0.0	1.3	1	0	0	1	1	1	0	Redoxin
DUF357	PF04010.8	gi|429216755|ref|YP_007174745.1|	-	2.7e-17	62.2	0.7	4.9e-17	61.4	0.5	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|429216755|ref|YP_007174745.1|	-	8.7e-11	42.1	0.0	1.4e-10	41.4	0.0	1.4	1	0	0	1	1	1	1	Cytidylyltransferase
DUF4477	PF14780.1	gi|429216755|ref|YP_007174745.1|	-	0.0069	15.7	0.3	0.011	15.0	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4477)
Sipho_Gp157	PF05565.6	gi|429216755|ref|YP_007174745.1|	-	0.019	14.5	1.2	0.019	14.5	0.9	1.6	2	0	0	2	2	2	0	Siphovirus	Gp157
FAD_syn	PF06574.7	gi|429216755|ref|YP_007174745.1|	-	0.076	12.6	0.1	0.36	10.4	0.0	2.0	2	0	0	2	2	2	0	FAD	synthetase
Urm1	PF09138.6	gi|429216755|ref|YP_007174745.1|	-	0.19	11.8	2.0	0.64	10.1	0.1	2.4	2	1	1	3	3	3	0	Urm1	(Ubiquitin	related	modifier)
Osmo_CC	PF08946.5	gi|429216755|ref|YP_007174745.1|	-	0.25	11.4	1.9	0.47	10.5	1.3	1.5	1	0	0	1	1	1	0	Osmosensory	transporter	coiled	coil
AMMECR1	PF01871.12	gi|429216756|ref|YP_007174746.1|	-	1.2e-56	190.4	0.0	1.5e-56	190.2	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Radical_SAM	PF04055.16	gi|429216758|ref|YP_007174748.1|	-	7.1e-22	78.3	0.0	1.1e-21	77.7	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.8	gi|429216758|ref|YP_007174748.1|	-	5e-20	71.4	0.0	9.1e-20	70.6	0.0	1.4	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_14	PF13394.1	gi|429216758|ref|YP_007174748.1|	-	2.3e-07	30.8	0.0	6e-07	29.5	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|429216758|ref|YP_007174748.1|	-	3.2e-06	27.3	0.1	8.6e-06	25.9	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
UbiA	PF01040.13	gi|429216760|ref|YP_007174750.1|	-	9.9e-28	97.0	25.2	1.2e-27	96.7	17.5	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2839	PF10999.3	gi|429216761|ref|YP_007174751.1|	-	0.0016	18.4	0.1	0.11	12.5	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2839)
DUF3784	PF12650.2	gi|429216761|ref|YP_007174751.1|	-	0.0019	18.1	1.5	0.005	16.7	1.1	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3784)
YukC	PF10140.4	gi|429216761|ref|YP_007174751.1|	-	0.0034	15.9	0.0	0.0045	15.6	0.0	1.2	1	0	0	1	1	1	1	WXG100	protein	secretion	system	(Wss),	protein	YukC
DUF3040	PF11239.3	gi|429216761|ref|YP_007174751.1|	-	0.012	15.6	0.1	0.07	13.1	0.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF3185	PF11381.3	gi|429216761|ref|YP_007174751.1|	-	0.024	14.3	2.4	0.024	14.3	1.7	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
DUF2417	PF10329.4	gi|429216761|ref|YP_007174751.1|	-	0.031	13.6	0.3	0.038	13.3	0.2	1.1	1	0	0	1	1	1	0	Region	of	unknown	function	(DUF2417)
DUF3753	PF12575.3	gi|429216761|ref|YP_007174751.1|	-	0.058	13.1	1.0	0.23	11.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
Peptidase_M56	PF05569.6	gi|429216761|ref|YP_007174751.1|	-	0.094	11.6	0.0	0.18	10.7	0.0	1.4	1	1	0	1	1	1	0	BlaR1	peptidase	M56
DUF202	PF02656.10	gi|429216761|ref|YP_007174751.1|	-	0.22	11.7	2.4	1.3	9.3	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
ETRAMP	PF09716.5	gi|429216761|ref|YP_007174751.1|	-	6.4	6.8	6.8	0.68	9.9	0.6	2.2	1	1	2	3	3	3	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
YqhR	PF11085.3	gi|429216763|ref|YP_007174753.1|	-	6.1	6.3	10.1	0.76	9.2	3.9	1.6	1	1	0	1	1	1	0	Conserved	membrane	protein	YqhR
DUF4147	PF13660.1	gi|429216764|ref|YP_007174754.1|	-	1.9e-72	243.2	0.0	2.6e-72	242.7	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|429216764|ref|YP_007174754.1|	-	3.7e-32	110.6	0.9	1.6e-31	108.5	0.5	2.1	2	0	0	2	2	2	1	MOFRL	family
Pyrophosphatase	PF00719.14	gi|429216765|ref|YP_007174755.1|	-	1.6e-57	193.3	0.0	1.8e-57	193.1	0.0	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
Ribosomal_L7Ae	PF01248.21	gi|429216766|ref|YP_007174756.1|	-	1.4e-30	104.6	1.1	1.8e-30	104.2	0.7	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.6	gi|429216766|ref|YP_007174756.1|	-	0.00025	20.9	0.0	0.00029	20.6	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
PELOTA_1	PF15608.1	gi|429216766|ref|YP_007174756.1|	-	0.0099	15.6	0.1	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
DUF3420	PF11900.3	gi|429216766|ref|YP_007174756.1|	-	0.13	12.3	1.1	0.25	11.4	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3420)
Ribosomal_S13	PF00416.17	gi|429216767|ref|YP_007174757.1|	-	7e-30	103.6	0.4	8.6e-30	103.3	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.6	gi|429216767|ref|YP_007174757.1|	-	0.0032	16.0	0.0	0.0035	15.9	0.0	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HHH_6	PF14579.1	gi|429216767|ref|YP_007174757.1|	-	0.0074	16.3	0.1	0.016	15.2	0.0	1.7	1	1	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|429216767|ref|YP_007174757.1|	-	0.0085	16.2	0.0	0.015	15.4	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
DUF496	PF04363.7	gi|429216767|ref|YP_007174757.1|	-	0.06	13.1	0.1	0.094	12.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF496)
S4	PF01479.20	gi|429216768|ref|YP_007174758.1|	-	5.7e-19	67.2	0.0	1.4e-18	66.0	0.0	1.7	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|429216768|ref|YP_007174758.1|	-	2.3e-05	24.6	0.5	8.2e-05	22.9	0.1	2.0	1	1	2	3	3	3	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.14	gi|429216769|ref|YP_007174759.1|	-	1.8e-42	143.9	0.4	2.1e-42	143.7	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
RNA_pol_A_bac	PF01000.21	gi|429216770|ref|YP_007174760.1|	-	1.4e-25	89.5	0.0	5.9e-25	87.5	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|429216770|ref|YP_007174760.1|	-	2.2e-15	55.5	0.0	2.7e-15	55.2	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Ribosomal_L18e	PF00828.14	gi|429216771|ref|YP_007174761.1|	-	2e-12	47.6	0.1	2.9e-12	47.1	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L13	PF00572.13	gi|429216772|ref|YP_007174762.1|	-	2.1e-28	98.9	0.5	2.5e-28	98.6	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Cu_amine_oxidN1	PF07833.6	gi|429216772|ref|YP_007174762.1|	-	0.13	12.5	0.4	0.65	10.3	0.1	2.0	2	0	0	2	2	2	0	Copper	amine	oxidase	N-terminal	domain
Ribosomal_S9	PF00380.14	gi|429216773|ref|YP_007174763.1|	-	1.3e-32	112.5	0.4	1.5e-32	112.3	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Toxin_4	PF00706.12	gi|429216773|ref|YP_007174763.1|	-	0.15	12.3	0.0	0.28	11.4	0.0	1.3	1	0	0	1	1	1	0	Anenome	neurotoxin
RNA_pol_N	PF01194.12	gi|429216774|ref|YP_007174764.1|	-	1.6e-25	88.8	0.1	2e-25	88.5	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|429216774|ref|YP_007174764.1|	-	0.079	13.0	0.2	0.2	11.7	0.1	1.7	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S2	PF00318.15	gi|429216775|ref|YP_007174765.1|	-	6.3e-36	123.5	0.0	1.9e-20	72.9	0.1	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S2
Peripla_BP_1	PF00532.16	gi|429216775|ref|YP_007174765.1|	-	0.00075	18.7	0.2	0.0012	18.1	0.2	1.2	1	0	0	1	1	1	1	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
DUF1492	PF07374.6	gi|429216776|ref|YP_007174766.1|	-	0.12	12.4	0.1	0.19	11.8	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1492)
Isochorismatase	PF00857.15	gi|429216777|ref|YP_007174767.1|	-	4e-39	134.3	0.0	4.6e-39	134.1	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
RTX_C	PF08339.5	gi|429216777|ref|YP_007174767.1|	-	0.12	12.1	0.2	3.5	7.3	0.1	2.2	2	0	0	2	2	2	0	RTX	C-terminal	domain
NAD_binding_2	PF03446.10	gi|429216778|ref|YP_007174768.1|	-	1.8e-26	92.8	0.0	3.1e-26	92.1	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|429216778|ref|YP_007174768.1|	-	6.5e-08	32.6	0.0	9.9e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|429216778|ref|YP_007174768.1|	-	2.7e-06	27.7	0.0	6.1e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.13	gi|429216778|ref|YP_007174768.1|	-	3.9e-06	26.6	0.0	7.9e-06	25.6	0.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|429216778|ref|YP_007174768.1|	-	1.1e-05	24.6	0.0	1.8e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|429216778|ref|YP_007174768.1|	-	0.0006	19.7	0.0	0.0073	16.3	0.0	2.4	2	0	0	2	2	2	1	TrkA-N	domain
IlvN	PF07991.7	gi|429216778|ref|YP_007174768.1|	-	0.0025	17.1	0.0	0.0048	16.2	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
DapB_N	PF01113.15	gi|429216778|ref|YP_007174768.1|	-	0.0028	17.5	0.1	0.011	15.6	0.1	2.0	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Gp_dh_N	PF00044.19	gi|429216778|ref|YP_007174768.1|	-	0.047	13.6	0.0	0.086	12.7	0.0	1.4	1	0	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429216778|ref|YP_007174768.1|	-	0.077	12.7	0.0	0.25	11.0	0.0	1.9	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|429216778|ref|YP_007174768.1|	-	0.086	12.2	0.2	0.27	10.5	0.1	1.8	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|429216778|ref|YP_007174768.1|	-	0.16	12.0	0.8	0.36	10.9	0.2	1.8	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Ribonuc_L-PSP	PF01042.16	gi|429216779|ref|YP_007174769.1|	-	2e-39	134.1	0.0	2.2e-39	133.9	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
AdoMet_dc	PF02675.10	gi|429216780|ref|YP_007174770.1|	-	1.5e-28	98.7	0.0	1.7e-28	98.6	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
TatD_DNase	PF01026.16	gi|429216782|ref|YP_007174772.1|	-	2.3e-24	85.9	0.0	2.8e-24	85.7	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
VWA_2	PF13519.1	gi|429216783|ref|YP_007174773.1|	-	1.3e-14	54.6	1.3	5.4e-14	52.6	0.0	2.2	2	1	1	3	3	3	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|429216783|ref|YP_007174773.1|	-	5.2e-11	42.5	0.5	5.2e-11	42.5	0.3	2.0	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|429216783|ref|YP_007174773.1|	-	7e-07	28.6	0.1	1.8e-06	27.2	0.0	1.6	2	0	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
vWA-TerF-like	PF10138.4	gi|429216783|ref|YP_007174773.1|	-	5.5e-06	26.3	0.0	1.2e-05	25.2	0.0	1.6	1	0	0	1	1	1	1	vWA	found	in	TerF	C	terminus
AAA_5	PF07728.9	gi|429216784|ref|YP_007174774.1|	-	1.4e-25	89.6	0.0	3.1e-25	88.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|429216784|ref|YP_007174774.1|	-	2.6e-05	23.8	0.0	5.2e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA	PF00004.24	gi|429216784|ref|YP_007174774.1|	-	0.00059	20.0	0.6	0.0029	17.7	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|429216784|ref|YP_007174774.1|	-	0.0045	17.1	0.9	0.076	13.1	0.0	3.0	2	1	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|429216784|ref|YP_007174774.1|	-	0.006	15.7	0.0	0.023	13.8	0.0	1.9	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_16	PF13191.1	gi|429216784|ref|YP_007174774.1|	-	0.0074	16.3	0.0	0.017	15.1	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
GAT	PF03127.9	gi|429216784|ref|YP_007174774.1|	-	0.013	15.4	1.5	0.036	14.0	1.0	1.8	1	0	0	1	1	1	0	GAT	domain
Sigma54_activat	PF00158.21	gi|429216784|ref|YP_007174774.1|	-	0.049	13.1	0.0	0.17	11.3	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
Flagellin_N	PF00669.15	gi|429216784|ref|YP_007174774.1|	-	0.13	12.0	0.8	0.31	10.8	0.5	1.6	1	0	0	1	1	1	0	Bacterial	flagellin	N-terminal	helical	region
IncA	PF04156.9	gi|429216784|ref|YP_007174774.1|	-	0.14	11.7	8.0	0.23	11.0	5.5	1.3	1	0	0	1	1	1	0	IncA	protein
Med4	PF10018.4	gi|429216784|ref|YP_007174774.1|	-	0.44	9.9	4.1	0.72	9.2	2.8	1.3	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
RBD-FIP	PF09457.5	gi|429216784|ref|YP_007174774.1|	-	2	8.2	7.2	4	7.3	1.3	2.6	2	0	0	2	2	2	0	FIP	domain
Baculo_PEP_C	PF04513.7	gi|429216784|ref|YP_007174774.1|	-	4.2	7.2	8.7	0.54	10.0	0.5	2.7	2	1	1	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TPP_enzyme_C	PF02775.16	gi|429216785|ref|YP_007174775.1|	-	3.9e-23	81.7	0.3	5.4e-23	81.2	0.2	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|429216785|ref|YP_007174775.1|	-	4.3e-07	29.1	0.4	8.9e-07	28.1	0.3	1.6	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|429216785|ref|YP_007174775.1|	-	0.0086	14.8	1.3	0.01	14.6	0.3	1.4	2	0	0	2	2	2	1	Dehydrogenase	E1	component
DUF3901	PF13040.1	gi|429216785|ref|YP_007174775.1|	-	0.22	10.8	2.3	0.46	9.8	1.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3901)
POR_N	PF01855.14	gi|429216786|ref|YP_007174776.1|	-	1.3e-65	221.1	2.9	1.6e-65	220.8	2.0	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|429216786|ref|YP_007174776.1|	-	8e-09	35.4	0.0	1.8e-08	34.3	0.0	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|429216786|ref|YP_007174776.1|	-	0.038	13.4	0.6	0.059	12.8	0.4	1.3	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4	PF00037.22	gi|429216787|ref|YP_007174777.1|	-	6.9e-16	57.0	16.1	3.5e-09	35.8	4.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429216787|ref|YP_007174777.1|	-	3.2e-11	42.8	20.8	1.5e-07	31.1	8.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|429216787|ref|YP_007174777.1|	-	4.9e-11	42.3	8.1	7.2e-11	41.7	5.6	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429216787|ref|YP_007174777.1|	-	2.4e-09	36.6	13.9	1.7e-06	27.6	3.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|429216787|ref|YP_007174777.1|	-	3.3e-09	36.9	10.2	6.8e-09	35.9	7.0	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|429216787|ref|YP_007174777.1|	-	1.6e-08	33.9	13.0	0.00028	20.6	2.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|429216787|ref|YP_007174777.1|	-	5.6e-08	32.9	10.4	8.4e-08	32.3	7.2	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|429216787|ref|YP_007174777.1|	-	2.5e-07	31.3	8.4	3.4e-05	24.4	1.0	2.3	2	1	1	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.1	gi|429216787|ref|YP_007174777.1|	-	7.1e-06	26.5	9.0	0.0013	19.2	1.2	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|429216787|ref|YP_007174777.1|	-	4.9e-05	23.3	11.6	0.021	15.1	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|429216787|ref|YP_007174777.1|	-	0.00042	20.6	9.9	0.057	13.8	0.4	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|429216787|ref|YP_007174777.1|	-	0.00061	19.6	5.2	0.00079	19.2	3.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|429216787|ref|YP_007174777.1|	-	0.001	19.0	11.3	0.045	13.7	2.1	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429216787|ref|YP_007174777.1|	-	0.0042	17.4	10.4	0.13	12.6	1.3	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|429216787|ref|YP_007174777.1|	-	0.043	14.3	8.3	0.043	14.3	5.8	2.4	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|429216787|ref|YP_007174777.1|	-	0.075	13.4	12.5	0.084	13.3	3.1	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
POR	PF01558.13	gi|429216788|ref|YP_007174778.1|	-	2.1e-36	125.4	0.3	2.5e-36	125.2	0.2	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF1743	PF08489.6	gi|429216789|ref|YP_007174779.1|	-	9e-26	89.9	0.0	1.6e-25	89.1	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.20	gi|429216789|ref|YP_007174779.1|	-	3.7e-07	29.9	0.0	7.1e-07	28.9	0.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|429216789|ref|YP_007174779.1|	-	0.00024	20.7	0.8	0.00043	19.8	0.5	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
tRNA_anti-like	PF12869.2	gi|429216789|ref|YP_007174779.1|	-	0.011	15.2	0.0	0.018	14.5	0.0	1.3	1	0	0	1	1	1	0	tRNA_anti-like
C1_1	PF00130.17	gi|429216789|ref|YP_007174779.1|	-	0.052	13.2	0.6	0.11	12.1	0.4	1.5	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DNA_RNApol_7kD	PF03604.8	gi|429216789|ref|YP_007174779.1|	-	0.34	10.4	3.0	1.2	8.6	2.1	1.9	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF1610	PF07754.6	gi|429216789|ref|YP_007174779.1|	-	0.41	10.8	3.7	0.86	9.7	2.6	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1610)
AsnC_trans_reg	PF01037.16	gi|429216790|ref|YP_007174780.1|	-	5.6e-14	51.6	0.3	6.3e-14	51.4	0.2	1.0	1	0	0	1	1	1	1	AsnC	family
GARS_N	PF02844.10	gi|429216790|ref|YP_007174780.1|	-	0.029	14.8	0.1	0.035	14.5	0.1	1.1	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	N	domain
GYD	PF08734.6	gi|429216790|ref|YP_007174780.1|	-	0.071	12.8	0.0	0.079	12.6	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
Lycopene_cycl	PF05834.7	gi|429216791|ref|YP_007174781.1|	-	0.00079	18.4	0.0	0.23	10.3	0.0	2.2	2	0	0	2	2	2	2	Lycopene	cyclase	protein
NAD_binding_2	PF03446.10	gi|429216791|ref|YP_007174781.1|	-	0.001	18.9	0.0	0.0016	18.3	0.0	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DAO	PF01266.19	gi|429216791|ref|YP_007174781.1|	-	0.0022	16.9	0.0	0.01	14.8	0.0	2.0	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|429216791|ref|YP_007174781.1|	-	0.017	14.7	0.0	0.025	14.2	0.0	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|429216791|ref|YP_007174781.1|	-	0.032	13.3	0.0	0.085	12.0	0.0	1.6	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|429216791|ref|YP_007174781.1|	-	0.051	13.6	0.0	0.14	12.2	0.0	1.7	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|429216791|ref|YP_007174781.1|	-	0.074	12.1	0.1	0.12	11.4	0.1	1.3	1	0	0	1	1	1	0	Thi4	family
PINIT	PF14324.1	gi|429216791|ref|YP_007174781.1|	-	0.077	13.0	1.4	0.15	12.0	1.0	1.4	1	0	0	1	1	1	0	PINIT	domain
Tub_2	PF04525.7	gi|429216792|ref|YP_007174782.1|	-	0.024	14.0	0.2	0.045	13.1	0.0	1.5	2	0	0	2	2	2	0	Tubby	C	2
DEAD	PF00270.24	gi|429216793|ref|YP_007174783.1|	-	1.4e-26	92.9	0.0	2.8e-26	91.9	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|429216793|ref|YP_007174783.1|	-	2e-19	69.2	0.0	4.5e-16	58.4	0.0	2.5	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.5	gi|429216793|ref|YP_007174783.1|	-	2.8e-12	47.0	0.0	6.9e-12	45.7	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.10	gi|429216793|ref|YP_007174783.1|	-	0.00017	21.4	0.0	0.00071	19.4	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|429216793|ref|YP_007174783.1|	-	0.018	14.7	0.0	0.05	13.3	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
PhoH	PF02562.11	gi|429216793|ref|YP_007174783.1|	-	0.035	13.3	0.0	0.5	9.5	0.0	2.4	2	0	0	2	2	2	0	PhoH-like	protein
SecA_DEAD	PF07517.9	gi|429216793|ref|YP_007174783.1|	-	0.092	12.0	0.0	0.16	11.2	0.0	1.3	1	0	0	1	1	1	0	SecA	DEAD-like	domain
Sugar_tr	PF00083.19	gi|429216794|ref|YP_007174784.1|	-	1.1e-56	192.2	20.8	1.4e-56	191.9	14.4	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|429216794|ref|YP_007174784.1|	-	4.9e-36	124.1	32.3	6.5e-32	110.6	18.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1129	PF06570.6	gi|429216794|ref|YP_007174784.1|	-	5.6	6.2	10.3	0.068	12.4	0.5	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1129)
Pyr_redox_2	PF07992.9	gi|429216795|ref|YP_007174785.1|	-	9.8e-27	94.1	3.4	7e-14	52.1	0.2	3.9	1	1	2	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|429216795|ref|YP_007174785.1|	-	8.8e-26	90.0	0.8	4.1e-25	87.9	0.0	2.4	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|429216795|ref|YP_007174785.1|	-	1.2e-23	83.2	1.3	7.5e-21	74.3	0.1	2.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|429216795|ref|YP_007174785.1|	-	1.8e-09	36.9	4.9	0.0001	21.2	0.7	4.0	2	2	0	3	3	3	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|429216795|ref|YP_007174785.1|	-	2.6e-06	26.1	8.9	0.0051	15.3	0.2	3.2	2	1	1	3	3	3	2	HI0933-like	protein
DAO	PF01266.19	gi|429216795|ref|YP_007174785.1|	-	6.6e-06	25.2	3.6	0.0072	15.2	0.4	3.4	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|429216795|ref|YP_007174785.1|	-	7e-06	25.3	0.3	0.0074	15.4	0.0	2.4	2	0	0	2	2	2	2	Thi4	family
K_oxygenase	PF13434.1	gi|429216795|ref|YP_007174785.1|	-	8.1e-06	24.9	0.0	0.00011	21.2	0.0	2.0	1	1	1	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_3	PF01494.14	gi|429216795|ref|YP_007174785.1|	-	1.1e-05	24.6	0.8	0.0048	15.9	0.1	2.4	2	0	0	2	2	2	2	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|429216795|ref|YP_007174785.1|	-	1.8e-05	24.8	0.1	0.0096	15.9	0.1	2.9	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|429216795|ref|YP_007174785.1|	-	3.4e-05	23.1	0.3	0.071	12.1	0.0	2.9	2	1	1	3	3	3	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|429216795|ref|YP_007174785.1|	-	3.8e-05	23.6	3.8	0.053	13.5	0.5	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|429216795|ref|YP_007174785.1|	-	0.0005	19.0	0.2	0.0005	19.0	0.1	2.6	3	1	0	3	3	3	1	FAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|429216795|ref|YP_007174785.1|	-	0.00058	19.2	2.3	0.0012	18.2	0.3	2.3	2	1	1	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|429216795|ref|YP_007174785.1|	-	0.00084	19.0	0.2	0.0026	17.4	0.1	1.8	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|429216795|ref|YP_007174785.1|	-	0.0033	16.6	0.0	0.032	13.3	0.0	2.4	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|429216795|ref|YP_007174785.1|	-	0.0054	15.6	3.6	2.7	6.8	0.1	3.1	3	0	0	3	3	3	2	Lycopene	cyclase	protein
AlaDh_PNT_C	PF01262.16	gi|429216795|ref|YP_007174785.1|	-	0.016	14.8	0.2	0.05	13.1	0.0	1.9	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.13	gi|429216795|ref|YP_007174785.1|	-	0.019	14.9	0.4	0.15	12.0	0.1	2.5	2	0	0	2	2	2	0	TrkA-N	domain
XdhC_C	PF13478.1	gi|429216795|ref|YP_007174785.1|	-	0.04	14.2	0.0	0.28	11.4	0.0	2.2	2	0	0	2	2	2	0	XdhC	Rossmann	domain
ThiF	PF00899.16	gi|429216795|ref|YP_007174785.1|	-	0.075	12.8	0.7	0.17	11.7	0.1	1.8	2	0	0	2	2	2	0	ThiF	family
NAD_binding_7	PF13241.1	gi|429216795|ref|YP_007174785.1|	-	0.21	11.8	0.7	23	5.3	0.1	2.6	2	2	0	2	2	2	0	Putative	NAD(P)-binding
Pribosyltran_N	PF13793.1	gi|429216796|ref|YP_007174786.1|	-	8e-24	83.6	0.1	4.7e-21	74.6	0.0	2.3	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|429216796|ref|YP_007174786.1|	-	4.2e-16	58.8	1.1	1.7e-15	56.8	0.4	2.3	2	1	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|429216796|ref|YP_007174786.1|	-	1.2e-13	51.2	1.7	3.5e-13	49.7	0.3	2.0	2	0	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|429216796|ref|YP_007174786.1|	-	1.9e-06	27.2	0.2	0.00019	20.7	0.0	2.2	2	0	0	2	2	2	2	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|429216796|ref|YP_007174786.1|	-	0.00012	21.4	0.1	0.00022	20.5	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase
PRTase_3	PF15610.1	gi|429216796|ref|YP_007174786.1|	-	0.017	14.0	0.1	0.027	13.3	0.1	1.3	1	0	0	1	1	1	0	PRTase	ComF-like
Pribosyltran	PF00156.22	gi|429216797|ref|YP_007174787.1|	-	5.6e-15	55.1	0.0	1e-14	54.3	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
HTH_3	PF01381.17	gi|429216797|ref|YP_007174787.1|	-	0.08	12.7	0.4	0.22	11.4	0.3	1.7	1	0	0	1	1	1	0	Helix-turn-helix
HTH_5	PF01022.15	gi|429216797|ref|YP_007174787.1|	-	0.39	10.4	1.8	0.39	10.4	0.3	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Glyco_tran_28_C	PF04101.11	gi|429216798|ref|YP_007174788.1|	-	6.9e-10	38.8	0.0	1.4e-09	37.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_1_3	PF13528.1	gi|429216798|ref|YP_007174788.1|	-	7.6e-10	38.4	0.0	1.2e-06	27.9	0.0	2.2	2	0	0	2	2	2	2	Glycosyl	transferase	family	1
Alg14	PF08660.6	gi|429216798|ref|YP_007174788.1|	-	2e-05	24.6	0.0	3.1e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Oligosaccharide	biosynthesis	protein	Alg14	like
Glyco_trans_4_2	PF13477.1	gi|429216798|ref|YP_007174788.1|	-	0.005	16.6	0.1	0.022	14.5	0.0	2.2	2	1	0	2	2	2	1	Glycosyl	transferase	4-like
YjeF_N	PF03853.10	gi|429216798|ref|YP_007174788.1|	-	0.019	14.5	0.0	0.034	13.7	0.0	1.4	1	0	0	1	1	1	0	YjeF-related	protein	N-terminus
Glyco_transf_28	PF03033.15	gi|429216798|ref|YP_007174788.1|	-	0.15	11.7	0.0	0.57	9.9	0.0	2.0	1	1	0	1	1	1	0	Glycosyltransferase	family	28	N-terminal	domain
Nol1_Nop2_Fmu	PF01189.12	gi|429216799|ref|YP_007174789.1|	-	1.1e-35	123.4	0.0	1e-33	116.9	0.0	2.0	2	0	0	2	2	2	1	NOL1/NOP2/sun	family
PUA	PF01472.15	gi|429216799|ref|YP_007174789.1|	-	1.7e-10	40.4	0.0	3.5e-10	39.4	0.0	1.6	1	0	0	1	1	1	1	PUA	domain
Methyltransf_31	PF13847.1	gi|429216799|ref|YP_007174789.1|	-	2.5e-09	36.9	0.1	5.2e-09	35.8	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|429216799|ref|YP_007174789.1|	-	1.5e-07	31.4	0.0	2.1e-07	30.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|429216799|ref|YP_007174789.1|	-	0.00042	20.3	0.0	0.00078	19.4	0.0	1.4	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_18	PF12847.2	gi|429216799|ref|YP_007174789.1|	-	0.0036	17.8	0.0	0.0061	17.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.1	gi|429216799|ref|YP_007174789.1|	-	0.022	15.6	0.0	0.07	13.9	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|429216799|ref|YP_007174789.1|	-	0.086	12.4	0.0	0.22	11.1	0.0	1.6	1	0	0	1	1	1	0	Hypothetical	methyltransferase
Cons_hypoth95	PF03602.10	gi|429216799|ref|YP_007174789.1|	-	0.15	11.4	0.0	0.38	10.1	0.0	1.6	1	1	1	2	2	2	0	Conserved	hypothetical	protein	95
DrsE	PF02635.10	gi|429216800|ref|YP_007174790.1|	-	0.00037	20.5	0.0	0.00046	20.2	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
MFS_1	PF07690.11	gi|429216801|ref|YP_007174791.1|	-	6.6e-45	153.3	57.2	2.6e-36	125.0	15.6	2.3	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429216801|ref|YP_007174791.1|	-	1e-11	44.1	13.9	1e-11	44.1	9.6	2.8	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|429216801|ref|YP_007174791.1|	-	6.9e-05	21.4	42.4	0.0015	16.9	5.8	4.2	2	2	2	4	4	4	4	MFS/sugar	transport	protein
DUF3084	PF11283.3	gi|429216801|ref|YP_007174791.1|	-	0.037	13.8	2.7	0.073	12.9	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3084)
DUF11	PF01345.13	gi|429216802|ref|YP_007174792.1|	-	2.4	8.2	10.2	13	5.8	0.5	3.6	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF11
TENA_THI-4	PF03070.11	gi|429216803|ref|YP_007174793.1|	-	3.8e-30	105.2	0.1	4.5e-30	104.9	0.1	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
AAA	PF00004.24	gi|429216804|ref|YP_007174794.1|	-	4.8e-38	130.3	0.0	1.1e-37	129.2	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Vps4_C	PF09336.5	gi|429216804|ref|YP_007174794.1|	-	1.9e-06	27.6	0.0	1.2e-05	25.1	0.0	2.1	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
MIT	PF04212.13	gi|429216804|ref|YP_007174794.1|	-	2.1e-06	27.5	3.0	6.1e-06	26.0	2.1	1.9	1	0	0	1	1	1	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_17	PF13207.1	gi|429216804|ref|YP_007174794.1|	-	2.6e-06	28.2	0.2	1.4e-05	25.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|429216804|ref|YP_007174794.1|	-	2.9e-06	27.2	0.1	0.00011	22.0	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|429216804|ref|YP_007174794.1|	-	6.5e-06	26.3	0.0	0.00035	20.7	0.0	3.0	1	1	1	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|429216804|ref|YP_007174794.1|	-	8.1e-06	25.6	0.0	0.00032	20.4	0.0	2.6	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|429216804|ref|YP_007174794.1|	-	1.2e-05	24.5	0.0	0.00017	20.7	0.0	2.6	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_2	PF07724.9	gi|429216804|ref|YP_007174794.1|	-	1.4e-05	25.0	0.0	3.5e-05	23.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|429216804|ref|YP_007174794.1|	-	3.1e-05	24.0	0.0	0.00067	19.6	0.0	2.6	1	1	2	3	3	3	1	AAA	ATPase	domain
TIP49	PF06068.8	gi|429216804|ref|YP_007174794.1|	-	9.2e-05	21.3	0.8	0.00027	19.7	0.0	2.1	2	1	1	3	3	3	1	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|429216804|ref|YP_007174794.1|	-	0.00019	20.5	0.1	0.0019	17.3	0.0	2.4	2	0	0	2	2	2	1	Zeta	toxin
AAA_25	PF13481.1	gi|429216804|ref|YP_007174794.1|	-	0.00059	19.2	2.1	0.007	15.7	0.1	2.7	2	1	1	3	3	3	1	AAA	domain
AAA_33	PF13671.1	gi|429216804|ref|YP_007174794.1|	-	0.00064	19.6	0.1	0.002	17.9	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|429216804|ref|YP_007174794.1|	-	0.0011	19.1	0.0	0.006	16.7	0.0	2.3	2	1	0	2	2	1	1	RNA	helicase
AAA_19	PF13245.1	gi|429216804|ref|YP_007174794.1|	-	0.0011	18.6	0.0	0.0025	17.5	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|429216804|ref|YP_007174794.1|	-	0.0014	18.0	0.0	0.0027	17.1	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|429216804|ref|YP_007174794.1|	-	0.0019	17.3	0.0	0.0048	16.0	0.0	1.6	2	0	0	2	2	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|429216804|ref|YP_007174794.1|	-	0.0043	17.0	0.1	0.04	13.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|429216804|ref|YP_007174794.1|	-	0.0051	17.1	3.1	0.025	14.9	0.0	3.2	3	1	0	3	3	3	1	AAA	domain
Sigma54_activat	PF00158.21	gi|429216804|ref|YP_007174794.1|	-	0.0055	16.1	0.0	0.15	11.5	0.0	2.7	3	0	0	3	3	3	1	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|429216804|ref|YP_007174794.1|	-	0.0083	15.8	4.4	0.9	9.1	0.0	3.5	2	1	1	4	4	4	1	Archaeal	ATPase
NACHT	PF05729.7	gi|429216804|ref|YP_007174794.1|	-	0.0094	15.6	0.0	0.021	14.4	0.0	1.7	1	0	0	1	1	1	1	NACHT	domain
AAA_24	PF13479.1	gi|429216804|ref|YP_007174794.1|	-	0.012	15.2	0.0	0.027	14.0	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Sec5	PF15469.1	gi|429216804|ref|YP_007174794.1|	-	0.019	14.7	0.3	0.046	13.4	0.2	1.6	1	0	0	1	1	1	0	Exocyst	complex	component	Sec5
KAP_NTPase	PF07693.9	gi|429216804|ref|YP_007174794.1|	-	0.021	13.7	0.0	3.7	6.4	0.0	2.4	1	1	1	2	2	2	0	KAP	family	P-loop	domain
DUF815	PF05673.8	gi|429216804|ref|YP_007174794.1|	-	0.023	13.6	0.0	0.058	12.3	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
TPR_11	PF13414.1	gi|429216804|ref|YP_007174794.1|	-	0.023	14.3	0.1	0.058	13.0	0.1	1.7	1	0	0	1	1	1	0	TPR	repeat
AAA_11	PF13086.1	gi|429216804|ref|YP_007174794.1|	-	0.027	14.0	0.0	0.072	12.6	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
TPR_6	PF13174.1	gi|429216804|ref|YP_007174794.1|	-	0.028	14.8	0.1	0.11	12.9	0.0	2.1	1	1	0	1	1	1	0	Tetratricopeptide	repeat
DUF4175	PF13779.1	gi|429216804|ref|YP_007174794.1|	-	0.031	12.0	0.0	0.041	11.6	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
Parvo_NS1	PF01057.12	gi|429216804|ref|YP_007174794.1|	-	0.033	13.0	0.0	0.067	12.0	0.0	1.5	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
DUF2075	PF09848.4	gi|429216804|ref|YP_007174794.1|	-	0.036	13.0	0.2	0.088	11.7	0.0	1.9	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
ATP-synt_ab	PF00006.20	gi|429216804|ref|YP_007174794.1|	-	0.036	13.5	0.0	0.44	9.9	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
RPA_C	PF08784.6	gi|429216804|ref|YP_007174794.1|	-	0.037	14.4	0.0	0.15	12.4	0.0	1.9	2	0	0	2	2	1	0	Replication	protein	A	C	terminal
Bac_DnaA	PF00308.13	gi|429216804|ref|YP_007174794.1|	-	0.043	13.4	0.3	0.42	10.2	0.0	2.3	2	1	0	2	2	2	0	Bacterial	dnaA	protein
ResIII	PF04851.10	gi|429216804|ref|YP_007174794.1|	-	0.049	13.4	0.0	0.24	11.2	0.0	2.0	1	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
KaiC	PF06745.8	gi|429216804|ref|YP_007174794.1|	-	0.058	12.5	0.4	0.74	8.8	0.0	2.6	2	1	1	3	3	3	0	KaiC
DUF3417	PF11897.3	gi|429216804|ref|YP_007174794.1|	-	0.064	13.2	0.2	0.13	12.2	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3417)
PTS_IIA	PF02255.11	gi|429216804|ref|YP_007174794.1|	-	0.07	13.0	0.9	0.18	11.6	0.6	1.6	1	0	0	1	1	1	0	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
PhoH	PF02562.11	gi|429216804|ref|YP_007174794.1|	-	0.081	12.1	0.0	0.2	10.8	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
T2SE	PF00437.15	gi|429216804|ref|YP_007174794.1|	-	0.14	11.0	0.0	0.26	10.1	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|429216804|ref|YP_007174794.1|	-	0.15	11.4	0.4	12	5.2	0.0	3.3	3	1	1	4	4	4	0	AAA-like	domain
TPR_16	PF13432.1	gi|429216804|ref|YP_007174794.1|	-	0.21	12.3	0.9	1.3	9.8	0.1	2.6	2	1	0	2	2	1	0	Tetratricopeptide	repeat
AAA_23	PF13476.1	gi|429216804|ref|YP_007174794.1|	-	0.41	10.9	5.6	3.3	7.9	0.5	3.0	2	1	0	2	2	2	0	AAA	domain
TPR_2	PF07719.12	gi|429216804|ref|YP_007174794.1|	-	1	9.4	4.9	0.74	9.8	0.3	2.9	3	0	0	3	3	2	0	Tetratricopeptide	repeat
DDE_Tnp_IS240	PF13610.1	gi|429216804|ref|YP_007174794.1|	-	4.9	7.1	6.2	1.9	8.4	0.6	2.9	4	1	0	4	4	3	0	DDE	domain
HTH_24	PF13412.1	gi|429216805|ref|YP_007174795.1|	-	0.00014	21.1	0.2	0.00014	21.1	0.1	2.5	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
EAP30	PF04157.11	gi|429216805|ref|YP_007174795.1|	-	0.0081	15.3	0.3	0.17	11.0	0.0	2.3	2	1	0	2	2	2	1	EAP30/Vps36	family
RPA_C	PF08784.6	gi|429216805|ref|YP_007174795.1|	-	0.011	16.1	0.5	8.7	6.8	0.0	3.2	2	2	2	4	4	4	0	Replication	protein	A	C	terminal
TrmB	PF01978.14	gi|429216805|ref|YP_007174795.1|	-	0.015	15.0	0.3	0.068	12.8	0.1	2.2	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
RICH	PF05062.7	gi|429216805|ref|YP_007174795.1|	-	1	9.5	4.6	0.4	10.8	1.1	1.9	2	0	0	2	2	2	0	RICH	domain
Aldo_ket_red	PF00248.16	gi|429216806|ref|YP_007174796.1|	-	1.4e-60	204.5	0.0	1.6e-60	204.3	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
MR_MLE_C	PF13378.1	gi|429216808|ref|YP_007174798.1|	-	3.1e-16	59.3	0.0	5.4e-16	58.5	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|429216808|ref|YP_007174798.1|	-	5.1e-13	49.3	0.0	8.6e-13	48.6	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|429216808|ref|YP_007174798.1|	-	1.2e-12	47.8	0.0	2.1e-12	47.0	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
CitMHS	PF03600.11	gi|429216809|ref|YP_007174799.1|	-	6.7e-28	97.2	0.0	1.2e-27	96.4	0.0	1.3	1	1	0	1	1	1	1	Citrate	transporter
TrkA_C	PF02080.16	gi|429216809|ref|YP_007174799.1|	-	1.8e-12	46.6	0.1	5.5e-09	35.4	0.0	3.4	3	1	0	3	3	3	2	TrkA-C	domain
Mut7-C	PF01927.11	gi|429216810|ref|YP_007174800.1|	-	3.6e-43	147.0	0.0	4.1e-43	146.8	0.0	1.0	1	0	0	1	1	1	1	Mut7-C	RNAse	domain
Rpr2	PF04032.11	gi|429216810|ref|YP_007174800.1|	-	0.023	14.5	1.5	0.069	13.0	1.2	1.7	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DZR	PF12773.2	gi|429216810|ref|YP_007174800.1|	-	0.048	13.4	1.3	0.11	12.3	0.9	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
ADK_lid	PF05191.9	gi|429216810|ref|YP_007174800.1|	-	0.071	12.7	0.5	2.9	7.6	0.0	2.5	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-ISL3	PF14690.1	gi|429216810|ref|YP_007174800.1|	-	0.073	13.1	1.7	0.63	10.1	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HNH_5	PF14279.1	gi|429216810|ref|YP_007174800.1|	-	0.11	12.4	1.5	1.1	9.3	0.0	2.3	1	1	1	2	2	2	0	HNH	endonuclease
HypA	PF01155.14	gi|429216810|ref|YP_007174800.1|	-	0.12	12.1	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|429216810|ref|YP_007174800.1|	-	0.26	10.8	2.4	8	6.0	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|429216810|ref|YP_007174800.1|	-	0.33	10.4	3.3	0.33	10.4	0.4	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Zn-ribbon_8	PF09723.5	gi|429216810|ref|YP_007174800.1|	-	0.73	9.8	3.8	8.1	6.4	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|429216810|ref|YP_007174800.1|	-	0.98	8.7	3.0	12	5.3	2.1	2.4	1	1	0	1	1	1	0	TFIIB	zinc-binding
Tnp_zf-ribbon_2	PF13842.1	gi|429216810|ref|YP_007174800.1|	-	1	9.7	6.0	12	6.3	4.1	2.2	1	1	1	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
TFIIS_C	PF01096.13	gi|429216810|ref|YP_007174800.1|	-	6.8	6.4	6.3	3.8	7.2	1.0	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
CBS	PF00571.23	gi|429216811|ref|YP_007174801.1|	-	9e-30	102.2	1.1	4.9e-15	55.0	1.5	2.1	2	0	0	2	2	2	2	CBS	domain
ParBc	PF02195.13	gi|429216812|ref|YP_007174802.1|	-	4.6e-11	42.6	0.1	9.3e-11	41.6	0.1	1.4	1	0	0	1	1	1	1	ParB-like	nuclease	domain
tRNA_anti-codon	PF01336.20	gi|429216813|ref|YP_007174803.1|	-	1.1e-08	34.7	0.4	1.8e-08	34.1	0.3	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DHO_dh	PF01180.16	gi|429216814|ref|YP_007174804.1|	-	8.2e-36	123.4	5.2	2.8e-35	121.7	3.6	1.7	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
NMO	PF03060.10	gi|429216814|ref|YP_007174804.1|	-	0.12	11.5	0.0	0.21	10.7	0.0	1.4	1	0	0	1	1	1	0	Nitronate	monooxygenase
Lactamase_B	PF00753.22	gi|429216816|ref|YP_007174806.1|	-	1.8e-05	24.4	0.1	5.3e-05	22.9	0.0	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|429216816|ref|YP_007174806.1|	-	0.00015	21.4	0.0	0.00028	20.4	0.0	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
TrkA_N	PF02254.13	gi|429216817|ref|YP_007174807.1|	-	3e-17	62.6	2.8	1.2e-16	60.7	1.8	2.1	3	0	0	3	3	3	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|429216817|ref|YP_007174807.1|	-	1.2e-05	24.8	0.0	9.5e-05	21.9	0.0	2.4	2	1	1	3	3	3	1	TrkA-C	domain
Ion_trans_2	PF07885.11	gi|429216817|ref|YP_007174807.1|	-	0.11	12.1	8.7	0.2	11.3	6.0	1.4	1	0	0	1	1	1	0	Ion	channel
Peptidase_M49	PF03571.10	gi|429216817|ref|YP_007174807.1|	-	0.12	10.4	0.0	0.16	9.9	0.0	1.1	1	0	0	1	1	1	0	Peptidase	family	M49
Arch_ATPase	PF01637.13	gi|429216818|ref|YP_007174808.1|	-	3.9e-38	131.4	1.2	7.9e-38	130.4	0.8	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|429216818|ref|YP_007174808.1|	-	5.9e-12	45.6	0.8	7.6e-10	38.7	0.1	3.2	2	2	1	3	3	3	1	AAA	domain
AAA_22	PF13401.1	gi|429216818|ref|YP_007174808.1|	-	1e-07	32.1	0.0	3.3e-07	30.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|429216818|ref|YP_007174808.1|	-	1.9e-05	24.8	0.0	0.00022	21.4	0.0	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|429216818|ref|YP_007174808.1|	-	0.00021	21.3	0.0	0.00087	19.3	0.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
PLU-1	PF08429.6	gi|429216818|ref|YP_007174808.1|	-	0.009	14.9	0.0	0.013	14.4	0.0	1.2	1	0	0	1	1	1	1	PLU-1-like	protein
AAA_35	PF14516.1	gi|429216818|ref|YP_007174808.1|	-	0.027	13.1	0.1	0.075	11.6	0.1	2.0	1	1	0	1	1	1	0	AAA-like	domain
AAA_23	PF13476.1	gi|429216818|ref|YP_007174808.1|	-	0.051	13.9	3.2	3.2	8.0	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
EFhand_Ca_insen	PF08726.5	gi|429216818|ref|YP_007174808.1|	-	0.064	13.2	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Ca2+	insensitive	EF	hand
AAA_17	PF13207.1	gi|429216818|ref|YP_007174808.1|	-	0.068	13.9	0.4	0.24	12.2	0.3	2.4	1	1	0	1	1	1	0	AAA	domain
DUF2258	PF10015.4	gi|429216819|ref|YP_007174809.1|	-	1.8e-20	72.5	0.4	2.9e-20	71.8	0.3	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
Cucumo_coat	PF00760.13	gi|429216819|ref|YP_007174809.1|	-	0.032	13.2	0.2	0.038	12.9	0.1	1.1	1	0	0	1	1	1	0	Cucumovirus	coat	protein
Metallophos	PF00149.23	gi|429216820|ref|YP_007174810.1|	-	2.2e-16	59.8	0.4	3e-16	59.4	0.3	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|429216820|ref|YP_007174810.1|	-	2.8e-11	43.4	0.0	5e-11	42.6	0.0	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
AAA_13	PF13166.1	gi|429216821|ref|YP_007174811.1|	-	1.4e-14	53.5	134.0	6.7e-09	34.7	36.4	5.4	1	1	2	4	4	4	2	AAA	domain
SMC_N	PF02463.14	gi|429216821|ref|YP_007174811.1|	-	3.3e-09	36.3	0.4	3.3e-09	36.3	0.3	3.8	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|429216821|ref|YP_007174811.1|	-	9.4e-09	35.8	69.3	9.4e-09	35.8	48.0	7.5	1	1	3	4	4	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|429216821|ref|YP_007174811.1|	-	7.9e-08	32.1	0.0	1.8e-07	30.9	0.0	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_21	PF13304.1	gi|429216821|ref|YP_007174811.1|	-	2.9e-07	30.7	16.5	2.9e-07	30.7	11.4	5.0	1	1	2	4	4	2	2	AAA	domain
AAA_29	PF13555.1	gi|429216821|ref|YP_007174811.1|	-	7.6e-05	22.1	0.0	0.00013	21.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Rad50_zn_hook	PF04423.9	gi|429216821|ref|YP_007174811.1|	-	0.001	18.5	1.5	0.001	18.5	1.0	9.7	11	2	0	11	11	10	1	Rad50	zinc	hook	motif
APG6	PF04111.7	gi|429216821|ref|YP_007174811.1|	-	0.0031	16.6	16.2	0.0031	16.6	11.2	6.0	1	1	4	6	6	6	2	Autophagy	protein	Apg6
IncA	PF04156.9	gi|429216821|ref|YP_007174811.1|	-	0.0077	15.8	95.9	0.082	12.4	11.4	6.5	3	2	2	5	5	5	2	IncA	protein
AAA_16	PF13191.1	gi|429216821|ref|YP_007174811.1|	-	0.0087	16.0	0.0	0.0087	16.0	0.0	3.5	4	1	0	4	4	3	1	AAA	ATPase	domain
AAA_27	PF13514.1	gi|429216821|ref|YP_007174811.1|	-	0.013	13.1	69.5	0.16	9.6	23.0	5.5	3	1	2	5	5	5	0	AAA	domain
DUF4164	PF13747.1	gi|429216821|ref|YP_007174811.1|	-	0.022	14.8	0.3	0.022	14.8	0.2	7.9	6	4	1	7	7	7	0	Domain	of	unknown	function	(DUF4164)
PilJ	PF13675.1	gi|429216821|ref|YP_007174811.1|	-	0.026	14.8	12.8	2.1	8.7	1.3	5.5	4	2	3	7	7	7	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Spc7	PF08317.6	gi|429216821|ref|YP_007174811.1|	-	0.033	12.8	127.3	0.018	13.6	13.7	5.2	2	2	3	5	5	5	0	Spc7	kinetochore	protein
AAA_22	PF13401.1	gi|429216821|ref|YP_007174811.1|	-	0.06	13.4	0.1	0.06	13.4	0.1	4.9	5	2	1	6	6	5	0	AAA	domain
Reo_sigmaC	PF04582.7	gi|429216821|ref|YP_007174811.1|	-	0.16	11.0	28.4	0.0081	15.3	2.1	4.7	2	1	1	5	5	5	0	Reovirus	sigma	C	capsid	protein
Filament	PF00038.16	gi|429216821|ref|YP_007174811.1|	-	0.44	9.9	108.2	0.065	12.6	30.3	4.5	1	1	2	3	3	3	0	Intermediate	filament	protein
WEMBL	PF05701.6	gi|429216821|ref|YP_007174811.1|	-	0.9	7.9	99.5	0.069	11.5	20.8	4.4	1	1	3	4	4	4	0	Weak	chloroplast	movement	under	blue	light
DUF1644	PF07800.7	gi|429216821|ref|YP_007174811.1|	-	7.4	6.4	10.4	1	9.2	2.6	3.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1644)
NurA	PF09376.5	gi|429216822|ref|YP_007174812.1|	-	1.2e-15	57.6	0.1	2.2e-15	56.7	0.1	1.4	1	1	0	1	1	1	1	NurA	domain
DUF87	PF01935.12	gi|429216823|ref|YP_007174813.1|	-	1e-44	153.0	0.8	1.6e-44	152.4	0.5	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|429216823|ref|YP_007174813.1|	-	1.1e-16	61.2	0.3	1.5e-14	54.1	0.2	2.1	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|429216823|ref|YP_007174813.1|	-	4.4e-05	22.0	0.0	0.0024	16.2	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
FtsK_SpoIIIE	PF01580.13	gi|429216823|ref|YP_007174813.1|	-	0.016	14.6	0.0	0.34	10.3	0.0	2.3	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|429216823|ref|YP_007174813.1|	-	0.064	11.8	0.0	0.21	10.1	0.0	1.7	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.7	gi|429216823|ref|YP_007174813.1|	-	0.073	12.5	0.0	0.18	11.2	0.0	1.6	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
SBP_bac_5	PF00496.17	gi|429216824|ref|YP_007174814.1|	-	3.2e-51	174.3	7.2	3.2e-51	174.3	5.0	1.7	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|429216824|ref|YP_007174814.1|	-	8.9e-08	31.7	0.0	6e-06	25.9	0.1	3.1	2	1	1	3	3	3	1	PKD	domain
Spermine_synth	PF01564.12	gi|429216825|ref|YP_007174815.1|	-	1.9e-09	36.8	0.0	4.9e-09	35.4	0.0	1.6	2	0	0	2	2	2	1	Spermine/spermidine	synthase
Methyltransf_18	PF12847.2	gi|429216825|ref|YP_007174815.1|	-	4.6e-09	36.8	0.0	7.9e-09	36.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|429216825|ref|YP_007174815.1|	-	8.6e-09	35.4	0.0	1.2e-08	34.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|429216825|ref|YP_007174815.1|	-	4.2e-06	26.2	0.0	7.2e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|429216825|ref|YP_007174815.1|	-	8.6e-06	25.4	0.0	1.6e-05	24.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|429216825|ref|YP_007174815.1|	-	2.8e-05	23.5	0.0	4.5e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PCMT	PF01135.14	gi|429216825|ref|YP_007174815.1|	-	8.4e-05	22.1	0.0	0.00013	21.6	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.8	gi|429216825|ref|YP_007174815.1|	-	0.00013	21.2	0.0	0.0002	20.5	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_30	PF05430.6	gi|429216825|ref|YP_007174815.1|	-	0.00015	21.3	0.0	0.00031	20.4	0.0	1.6	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_15	PF09445.5	gi|429216825|ref|YP_007174815.1|	-	0.0003	20.3	0.0	0.00055	19.5	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
UPF0020	PF01170.13	gi|429216825|ref|YP_007174815.1|	-	0.0023	17.5	0.0	0.0037	16.8	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_24	PF13578.1	gi|429216825|ref|YP_007174815.1|	-	0.004	17.9	0.0	0.016	16.0	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
CMAS	PF02353.15	gi|429216825|ref|YP_007174815.1|	-	0.0089	15.1	0.0	0.017	14.1	0.0	1.4	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_3	PF01596.12	gi|429216825|ref|YP_007174815.1|	-	0.02	13.9	0.0	0.034	13.1	0.0	1.4	1	0	0	1	1	1	0	O-methyltransferase
RrnaAD	PF00398.15	gi|429216825|ref|YP_007174815.1|	-	0.022	13.8	0.1	0.11	11.4	0.0	1.9	1	1	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
Nitro_FeMo-Co	PF02579.12	gi|429216826|ref|YP_007174816.1|	-	0.052	13.6	0.0	0.071	13.1	0.0	1.2	1	0	0	1	1	1	0	Dinitrogenase	iron-molybdenum	cofactor
Pox_A22	PF04848.8	gi|429216826|ref|YP_007174816.1|	-	0.055	13.3	0.0	0.065	13.1	0.0	1.1	1	0	0	1	1	1	0	Poxvirus	A22	protein
MS_channel	PF00924.13	gi|429216827|ref|YP_007174817.1|	-	2.2e-16	59.8	0.8	2.2e-16	59.8	0.5	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF917	PF06032.7	gi|429216827|ref|YP_007174817.1|	-	0.13	10.7	0.0	0.19	10.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF917)
Claudin_2	PF13903.1	gi|429216827|ref|YP_007174817.1|	-	6	6.5	7.4	5.5	6.6	0.6	2.4	2	0	0	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
EamA	PF00892.15	gi|429216828|ref|YP_007174818.1|	-	1.4e-20	73.6	33.1	2.5e-13	50.1	13.0	2.5	2	1	1	3	3	3	2	EamA-like	transporter	family
UPF0546	PF10639.4	gi|429216828|ref|YP_007174818.1|	-	0.00089	19.0	8.1	0.042	13.6	0.1	2.5	2	1	0	2	2	2	2	Uncharacterised	protein	family	UPF0546
EmrE	PF13536.1	gi|429216828|ref|YP_007174818.1|	-	0.0076	16.4	28.9	0.098	12.8	1.3	3.1	1	1	2	3	3	3	2	Multidrug	resistance	efflux	transporter
DUF872	PF05915.7	gi|429216828|ref|YP_007174818.1|	-	0.81	9.5	12.8	14	5.6	0.5	3.7	3	1	0	3	3	3	0	Eukaryotic	protein	of	unknown	function	(DUF872)
HTH_5	PF01022.15	gi|429216829|ref|YP_007174819.1|	-	1.9e-15	56.2	0.1	3.7e-15	55.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|429216829|ref|YP_007174819.1|	-	1.1e-05	25.1	0.0	1.5e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|429216829|ref|YP_007174819.1|	-	7.4e-05	22.3	0.1	0.00021	20.9	0.0	1.7	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|429216829|ref|YP_007174819.1|	-	0.00049	20.0	0.0	0.001	19.0	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_38	PF13936.1	gi|429216829|ref|YP_007174819.1|	-	0.003	17.0	0.0	0.0051	16.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|429216829|ref|YP_007174819.1|	-	0.0033	16.7	0.0	0.0066	15.8	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Phage_rep_org_N	PF09681.5	gi|429216829|ref|YP_007174819.1|	-	0.011	15.3	0.1	0.016	14.8	0.1	1.3	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_9	PF08221.6	gi|429216829|ref|YP_007174819.1|	-	0.05	13.4	0.2	0.15	11.9	0.1	1.7	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
KorB	PF08535.5	gi|429216829|ref|YP_007174819.1|	-	0.055	13.6	0.0	0.14	12.3	0.0	1.6	2	0	0	2	2	2	0	KorB	domain
LAGLIDADG_1	PF00961.14	gi|429216829|ref|YP_007174819.1|	-	0.07	13.6	4.1	0.81	10.2	2.2	2.1	1	1	1	2	2	2	0	LAGLIDADG	endonuclease
HTH_41	PF14502.1	gi|429216829|ref|YP_007174819.1|	-	0.099	12.2	0.1	0.44	10.1	0.1	2.1	1	1	0	1	1	1	0	Helix-turn-helix	domain
HrcA_DNA-bdg	PF03444.10	gi|429216829|ref|YP_007174819.1|	-	0.31	10.5	1.7	0.67	9.4	0.0	2.2	2	1	1	3	3	3	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
zf-FCS	PF06467.9	gi|429216830|ref|YP_007174820.1|	-	6.8e-07	28.8	1.7	8.4e-07	28.5	1.2	1.1	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|429216830|ref|YP_007174820.1|	-	3.6e-05	23.8	2.8	5.1e-05	23.3	1.9	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
ATPase-cat_bd	PF12156.3	gi|429216830|ref|YP_007174820.1|	-	0.0014	19.1	3.3	0.0015	19.0	2.3	1.1	1	0	0	1	1	1	1	Putative	metal-binding	domain	of	cation	transport	ATPase
Zn_ribbon_2	PF12674.2	gi|429216830|ref|YP_007174820.1|	-	0.006	16.9	1.8	0.0068	16.7	1.2	1.2	1	0	0	1	1	1	1	Putative	zinc	ribbon	domain
Ta0938	PF11494.3	gi|429216830|ref|YP_007174820.1|	-	0.0092	16.0	0.4	0.0092	16.0	0.3	1.0	1	0	0	1	1	1	1	Ta0938
DZR	PF12773.2	gi|429216830|ref|YP_007174820.1|	-	0.016	15.0	2.0	0.024	14.4	1.4	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_ribbon_recom	PF13408.1	gi|429216830|ref|YP_007174820.1|	-	0.019	15.2	1.7	0.024	14.8	1.2	1.2	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
LIM	PF00412.17	gi|429216830|ref|YP_007174820.1|	-	0.026	14.5	4.9	0.22	11.6	3.4	1.9	1	1	0	1	1	1	0	LIM	domain
Tox-PL-2	PF15643.1	gi|429216830|ref|YP_007174820.1|	-	0.039	13.9	0.7	0.051	13.5	0.2	1.5	1	1	0	1	1	1	0	Papain	fold	toxin	2
Zn-ribbon_8	PF09723.5	gi|429216830|ref|YP_007174820.1|	-	0.055	13.4	2.8	1.7	8.6	0.0	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
DUF3268	PF11672.3	gi|429216830|ref|YP_007174820.1|	-	0.093	12.8	1.2	0.1	12.6	0.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3268)
Vps39_2	PF10367.4	gi|429216830|ref|YP_007174820.1|	-	0.094	12.9	1.0	0.11	12.7	0.7	1.2	1	0	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
Nudix_N_2	PF14803.1	gi|429216830|ref|YP_007174820.1|	-	0.12	12.0	4.3	3.1	7.5	0.1	2.7	2	1	0	2	2	2	0	Nudix	N-terminal
zf-FPG_IleRS	PF06827.9	gi|429216830|ref|YP_007174820.1|	-	0.12	12.0	6.3	4.7	6.9	4.4	2.2	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|429216830|ref|YP_007174820.1|	-	0.13	11.8	0.3	0.13	11.8	0.2	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|429216830|ref|YP_007174820.1|	-	0.19	11.4	1.7	0.24	11.1	1.2	1.3	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF2256	PF10013.4	gi|429216830|ref|YP_007174820.1|	-	0.2	11.4	3.3	1	9.1	2.2	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
DUF2197	PF09963.4	gi|429216830|ref|YP_007174820.1|	-	0.29	11.1	2.7	1.6	8.7	1.9	1.8	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2197)
YHS	PF04945.8	gi|429216830|ref|YP_007174820.1|	-	0.3	10.9	4.1	0.33	10.8	2.8	1.3	1	1	0	1	1	1	0	YHS	domain
zf-H2C2_2	PF13465.1	gi|429216830|ref|YP_007174820.1|	-	0.32	11.3	0.3	0.32	11.3	0.2	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
Prok-RING_1	PF14446.1	gi|429216830|ref|YP_007174820.1|	-	0.34	10.6	4.1	5.1	6.9	3.0	2.0	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
DUF1272	PF06906.6	gi|429216830|ref|YP_007174820.1|	-	0.39	10.5	3.1	0.59	10.0	2.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
NinF	PF05810.7	gi|429216830|ref|YP_007174820.1|	-	0.76	9.6	5.3	16	5.3	3.6	2.0	1	1	0	1	1	1	0	NinF	protein
zf-ribbon_3	PF13248.1	gi|429216830|ref|YP_007174820.1|	-	1.1	8.6	7.4	8.1	5.8	5.3	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|429216830|ref|YP_007174820.1|	-	2	8.2	5.9	5.4	6.9	4.1	1.6	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf-C3HC4_3	PF13920.1	gi|429216830|ref|YP_007174820.1|	-	2.8	7.6	7.0	19	4.9	4.8	1.9	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Pyr_redox_2	PF07992.9	gi|429216831|ref|YP_007174821.1|	-	7.3e-39	133.7	8.0	3.3e-20	72.8	0.0	4.5	3	1	1	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|429216831|ref|YP_007174821.1|	-	8.7e-33	112.6	0.7	1.4e-32	111.9	0.2	1.6	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|429216831|ref|YP_007174821.1|	-	2.7e-15	56.5	0.6	2.7e-15	56.5	0.4	2.7	4	0	0	4	4	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|429216831|ref|YP_007174821.1|	-	9.4e-11	42.1	0.2	0.0002	21.5	0.0	3.4	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|429216831|ref|YP_007174821.1|	-	4.8e-10	38.8	8.4	0.002	17.0	0.1	4.7	4	1	1	5	5	5	4	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|429216831|ref|YP_007174821.1|	-	4.8e-06	25.3	5.3	0.14	10.6	0.1	3.9	4	0	0	4	4	4	3	HI0933-like	protein
DAO	PF01266.19	gi|429216831|ref|YP_007174821.1|	-	8.1e-05	21.6	6.4	0.049	12.5	0.1	3.4	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|429216831|ref|YP_007174821.1|	-	0.0048	15.8	3.4	3.2	6.4	0.5	3.1	3	0	0	3	3	3	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|429216831|ref|YP_007174821.1|	-	0.0049	15.9	0.1	0.0088	15.1	0.1	1.4	1	0	0	1	1	1	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|429216831|ref|YP_007174821.1|	-	0.0093	15.5	0.6	1.6	8.2	0.0	2.9	3	0	0	3	3	3	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|429216831|ref|YP_007174821.1|	-	0.015	14.4	0.0	0.2	10.8	0.0	2.4	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
FAD_oxidored	PF12831.2	gi|429216831|ref|YP_007174821.1|	-	0.015	14.3	0.0	0.28	10.2	0.0	2.3	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Lipoprotein_19	PF13617.1	gi|429216831|ref|YP_007174821.1|	-	0.038	13.6	2.9	1.1	8.9	0.0	2.6	2	0	0	2	2	2	0	YnbE-like	lipoprotein
NAD_binding_8	PF13450.1	gi|429216831|ref|YP_007174821.1|	-	0.046	13.7	1.4	0.1	12.6	0.0	2.2	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|429216831|ref|YP_007174821.1|	-	0.14	11.0	3.2	0.58	9.0	0.1	2.5	2	1	1	3	3	3	0	Lycopene	cyclase	protein
Hydantoinase_A	PF01968.13	gi|429216832|ref|YP_007174822.1|	-	3.6e-85	285.5	7.7	2e-84	283.1	0.3	2.5	3	0	0	3	3	3	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|429216832|ref|YP_007174822.1|	-	3e-50	170.1	0.2	1.2e-49	168.2	0.0	2.0	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase	N-terminal	region
BcrAD_BadFG	PF01869.15	gi|429216832|ref|YP_007174822.1|	-	0.0034	16.7	0.6	0.17	11.1	0.0	2.3	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
MutL	PF13941.1	gi|429216832|ref|YP_007174822.1|	-	0.0059	14.9	3.4	0.81	7.9	0.1	2.7	3	0	0	3	3	3	2	MutL	protein
EutA	PF06277.6	gi|429216832|ref|YP_007174822.1|	-	0.085	11.4	0.6	0.24	9.9	0.4	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutA
Hydantoinase_B	PF02538.9	gi|429216833|ref|YP_007174823.1|	-	3.5e-152	507.3	0.1	4e-152	507.1	0.1	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
SBP_bac_5	PF00496.17	gi|429216834|ref|YP_007174824.1|	-	1.6e-43	148.9	6.8	2.5e-43	148.3	4.7	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
AdoMet_dc	PF02675.10	gi|429216835|ref|YP_007174825.1|	-	3e-30	104.2	0.0	3.7e-30	103.9	0.0	1.1	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
DUF2480	PF10652.4	gi|429216835|ref|YP_007174825.1|	-	0.035	13.6	0.0	0.049	13.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2480)
Thioredoxin	PF00085.15	gi|429216836|ref|YP_007174826.1|	-	1.9e-27	94.9	0.0	2.8e-27	94.4	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|429216836|ref|YP_007174826.1|	-	7.1e-10	39.0	0.5	6.8e-09	35.9	0.1	2.2	2	1	0	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|429216836|ref|YP_007174826.1|	-	8.8e-08	32.1	0.3	3.2e-07	30.3	0.1	2.0	2	1	0	2	2	2	1	Thioredoxin-like
Redoxin	PF08534.5	gi|429216836|ref|YP_007174826.1|	-	9.5e-05	21.9	0.0	0.00012	21.6	0.0	1.2	1	0	0	1	1	1	1	Redoxin
AhpC-TSA	PF00578.16	gi|429216836|ref|YP_007174826.1|	-	0.00049	19.7	0.0	0.00059	19.5	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Thioredoxin_3	PF13192.1	gi|429216836|ref|YP_007174826.1|	-	0.0018	18.0	0.0	0.0043	16.8	0.0	1.7	2	0	0	2	2	2	1	Thioredoxin	domain
Phosducin	PF02114.11	gi|429216836|ref|YP_007174826.1|	-	0.013	14.2	0.0	0.017	13.8	0.0	1.3	1	1	0	1	1	1	0	Phosducin
TraF	PF13728.1	gi|429216836|ref|YP_007174826.1|	-	0.03	13.8	0.0	0.047	13.1	0.0	1.5	1	1	0	1	1	1	0	F	plasmid	transfer	operon	protein
Thioredoxin_7	PF13899.1	gi|429216836|ref|YP_007174826.1|	-	0.037	14.0	0.0	0.072	13.1	0.0	1.6	1	0	0	1	1	1	0	Thioredoxin-like
Thioredoxin_9	PF14595.1	gi|429216836|ref|YP_007174826.1|	-	0.1	12.1	0.1	0.13	11.8	0.0	1.2	1	0	0	1	1	1	0	Thioredoxin
ANTH	PF07651.11	gi|429216837|ref|YP_007174827.1|	-	0.047	12.3	0.2	0.066	11.9	0.1	1.1	1	0	0	1	1	1	0	ANTH	domain
LRR_9	PF14580.1	gi|429216837|ref|YP_007174827.1|	-	0.22	11.0	1.1	0.33	10.4	0.7	1.4	1	1	0	1	1	1	0	Leucine-rich	repeat
Pyr_redox_2	PF07992.9	gi|429216838|ref|YP_007174828.1|	-	1.4e-27	96.9	3.5	3.8e-13	49.7	0.0	3.5	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429216838|ref|YP_007174828.1|	-	1e-18	67.5	3.4	4.3e-14	52.6	0.3	3.5	3	1	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|429216838|ref|YP_007174828.1|	-	9.6e-18	64.2	0.0	2.6e-17	62.8	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|429216838|ref|YP_007174828.1|	-	1.6e-09	38.0	0.1	1.8e-05	24.9	0.0	3.1	2	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|429216838|ref|YP_007174828.1|	-	1.7e-08	33.7	0.1	0.0061	15.5	0.2	3.3	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|429216838|ref|YP_007174828.1|	-	6.7e-07	29.2	0.2	0.062	13.3	0.0	2.7	3	0	0	3	3	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|429216838|ref|YP_007174828.1|	-	7.8e-07	27.8	0.5	0.05	12.0	0.1	3.7	4	0	0	4	4	4	2	HI0933-like	protein
NAD_Gly3P_dh_N	PF01210.18	gi|429216838|ref|YP_007174828.1|	-	2.4e-06	27.3	0.3	0.00085	19.0	0.1	3.2	3	0	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.13	gi|429216838|ref|YP_007174828.1|	-	2.8e-06	27.3	0.0	0.0016	18.4	0.1	2.6	2	0	0	2	2	2	1	TrkA-N	domain
F420_oxidored	PF03807.12	gi|429216838|ref|YP_007174828.1|	-	2e-05	24.9	1.2	0.042	14.2	0.1	3.4	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
GIDA	PF01134.17	gi|429216838|ref|YP_007174828.1|	-	2.4e-05	23.3	1.3	0.021	13.7	0.1	3.0	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|429216838|ref|YP_007174828.1|	-	8.4e-05	22.3	0.1	0.31	10.8	0.0	2.7	3	0	0	3	3	2	2	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|429216838|ref|YP_007174828.1|	-	0.00027	19.9	0.1	0.32	9.8	0.0	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
3HCDH_N	PF02737.13	gi|429216838|ref|YP_007174828.1|	-	0.0006	19.5	0.2	0.0017	18.0	0.0	1.8	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_2	PF00890.19	gi|429216838|ref|YP_007174828.1|	-	0.00064	18.6	0.5	1.3	7.8	0.0	3.1	3	0	0	3	3	3	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|429216838|ref|YP_007174828.1|	-	0.0012	17.9	0.3	0.031	13.3	0.1	2.2	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|429216838|ref|YP_007174828.1|	-	0.0015	18.7	0.0	0.13	12.5	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
K_oxygenase	PF13434.1	gi|429216838|ref|YP_007174828.1|	-	0.005	15.8	0.0	0.18	10.6	0.0	2.5	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.9	gi|429216838|ref|YP_007174828.1|	-	0.07	11.7	0.6	2	6.9	0.0	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
NAD_binding_2	PF03446.10	gi|429216838|ref|YP_007174828.1|	-	0.081	12.7	0.1	0.19	11.5	0.1	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
FAD_oxidored	PF12831.2	gi|429216838|ref|YP_007174828.1|	-	0.17	10.9	0.1	1.2	8.1	0.1	2.0	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
SBP_bac_5	PF00496.17	gi|429216839|ref|YP_007174829.1|	-	3.3e-51	174.2	9.2	1.1e-50	172.5	4.7	2.4	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Shisa	PF13908.1	gi|429216839|ref|YP_007174829.1|	-	0.37	10.9	3.0	0.78	9.8	2.0	1.5	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
MoCF_biosynth	PF00994.19	gi|429216840|ref|YP_007174830.1|	-	1.4e-25	89.4	0.1	1.7e-25	89.1	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
GATase	PF00117.23	gi|429216840|ref|YP_007174830.1|	-	0.029	13.8	0.2	0.11	11.9	0.1	1.7	2	0	0	2	2	2	0	Glutamine	amidotransferase	class-I
PNP_UDP_1	PF01048.15	gi|429216841|ref|YP_007174831.1|	-	1e-45	155.5	0.0	1.2e-45	155.3	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
PTH2	PF01981.11	gi|429216843|ref|YP_007174833.1|	-	7.8e-44	148.0	0.1	8.7e-44	147.9	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Pribosyltran	PF00156.22	gi|429216844|ref|YP_007174834.1|	-	6.6e-19	67.8	0.0	9.5e-19	67.3	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|429216844|ref|YP_007174834.1|	-	0.011	14.9	0.0	0.015	14.4	0.0	1.1	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|429216844|ref|YP_007174834.1|	-	0.15	11.3	0.0	0.22	10.8	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
PK	PF00224.16	gi|429216845|ref|YP_007174835.1|	-	5.3e-85	285.0	2.8	6.7e-85	284.7	1.9	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|429216845|ref|YP_007174835.1|	-	1.3e-11	44.0	0.0	2.8e-11	42.9	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|429216845|ref|YP_007174835.1|	-	9.2e-06	24.6	0.2	2.2e-05	23.4	0.0	1.7	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
IMPDH	PF00478.20	gi|429216845|ref|YP_007174835.1|	-	0.056	12.3	0.0	0.17	10.7	0.0	1.8	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
DUF2204	PF09970.4	gi|429216846|ref|YP_007174836.1|	-	6.5e-48	162.5	5.3	7.3e-48	162.4	3.7	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
NTP_transf_5	PF14907.1	gi|429216846|ref|YP_007174836.1|	-	0.047	13.0	0.0	0.076	12.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	nucleotidyltransferase
Peripla_BP_6	PF13458.1	gi|429216847|ref|YP_007174837.1|	-	6.3e-52	177.0	3.4	8.6e-52	176.5	2.4	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.1	gi|429216847|ref|YP_007174837.1|	-	3.6e-14	52.2	0.4	6e-14	51.5	0.3	1.3	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
PBCV_basic_adap	PF08789.5	gi|429216847|ref|YP_007174837.1|	-	0.13	11.9	0.9	0.31	10.7	0.6	1.5	1	0	0	1	1	1	0	PBCV-specific	basic	adaptor	domain
ABC_tran	PF00005.22	gi|429216848|ref|YP_007174838.1|	-	2.4e-22	79.7	0.0	3.4e-22	79.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
BCA_ABC_TP_C	PF12399.3	gi|429216848|ref|YP_007174838.1|	-	2.8e-06	26.8	0.0	4.6e-06	26.1	0.0	1.4	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA	PF00004.24	gi|429216848|ref|YP_007174838.1|	-	4.2e-05	23.7	0.7	0.00094	19.3	0.5	2.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.14	gi|429216848|ref|YP_007174838.1|	-	7.1e-05	22.1	0.0	0.037	13.2	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|429216848|ref|YP_007174838.1|	-	0.00012	21.5	0.0	0.00022	20.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.1	gi|429216848|ref|YP_007174838.1|	-	0.00035	20.6	0.0	0.018	14.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|429216848|ref|YP_007174838.1|	-	0.00052	20.3	0.1	0.0021	18.4	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|429216848|ref|YP_007174838.1|	-	0.0017	17.5	0.1	0.0028	16.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|429216848|ref|YP_007174838.1|	-	0.0043	16.9	0.0	1.6	8.6	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|429216848|ref|YP_007174838.1|	-	0.0059	16.0	0.0	2.7	7.3	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
NTPase_1	PF03266.10	gi|429216848|ref|YP_007174838.1|	-	0.0093	15.6	0.4	2.7	7.6	0.0	2.3	2	0	0	2	2	2	2	NTPase
AAA_22	PF13401.1	gi|429216848|ref|YP_007174838.1|	-	0.012	15.8	0.1	0.099	12.7	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|429216848|ref|YP_007174838.1|	-	0.014	15.0	0.0	0.035	13.6	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|429216848|ref|YP_007174838.1|	-	0.065	12.8	0.0	0.15	11.6	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Pico_P2B	PF01552.12	gi|429216848|ref|YP_007174838.1|	-	0.083	13.0	0.4	0.21	11.7	0.1	1.7	2	0	0	2	2	1	0	Picornavirus	2B	protein
AAA_17	PF13207.1	gi|429216848|ref|YP_007174838.1|	-	0.11	13.2	0.1	0.41	11.4	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|429216848|ref|YP_007174838.1|	-	0.12	12.3	0.0	0.27	11.1	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|429216849|ref|YP_007174839.1|	-	1.5e-31	109.5	0.2	2e-31	109.0	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429216849|ref|YP_007174839.1|	-	7.5e-15	55.6	5.9	1.1e-09	38.6	0.1	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|429216849|ref|YP_007174839.1|	-	1.7e-10	40.5	1.1	3.2e-10	39.6	0.8	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|429216849|ref|YP_007174839.1|	-	7.3e-07	28.9	0.1	0.016	14.7	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
AAA_15	PF13175.1	gi|429216849|ref|YP_007174839.1|	-	1.4e-05	24.3	7.2	0.023	13.7	5.2	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|429216849|ref|YP_007174839.1|	-	2.9e-05	24.4	5.2	9e-05	22.8	3.6	1.8	1	1	0	1	1	1	1	AAA	domain
Arf	PF00025.16	gi|429216849|ref|YP_007174839.1|	-	0.00054	19.2	0.3	0.0012	18.1	0.2	1.5	1	0	0	1	1	1	1	ADP-ribosylation	factor	family
AAA_29	PF13555.1	gi|429216849|ref|YP_007174839.1|	-	0.00056	19.3	0.1	0.0011	18.4	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Mg_chelatase	PF01078.16	gi|429216849|ref|YP_007174839.1|	-	0.0027	16.9	0.1	1.9	7.5	0.0	2.1	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
SRP54	PF00448.17	gi|429216849|ref|YP_007174839.1|	-	0.0047	16.3	0.4	0.0074	15.7	0.3	1.5	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
FtsK_SpoIIIE	PF01580.13	gi|429216849|ref|YP_007174839.1|	-	0.0085	15.5	0.0	0.017	14.6	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
NACHT	PF05729.7	gi|429216849|ref|YP_007174839.1|	-	0.0091	15.6	0.7	0.019	14.6	0.2	1.7	2	0	0	2	2	2	1	NACHT	domain
AAA_14	PF13173.1	gi|429216849|ref|YP_007174839.1|	-	0.014	15.3	0.9	0.037	13.9	0.6	1.8	1	1	0	1	1	1	0	AAA	domain
DUF3584	PF12128.3	gi|429216849|ref|YP_007174839.1|	-	0.016	12.5	0.1	0.025	11.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
DUF258	PF03193.11	gi|429216849|ref|YP_007174839.1|	-	0.021	13.9	0.1	0.044	12.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|429216849|ref|YP_007174839.1|	-	0.032	14.2	0.2	0.1	12.5	0.1	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|429216849|ref|YP_007174839.1|	-	0.035	13.7	0.6	0.044	13.4	0.4	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_30	PF13604.1	gi|429216849|ref|YP_007174839.1|	-	0.04	13.5	0.0	0.15	11.5	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|429216849|ref|YP_007174839.1|	-	0.057	12.8	0.3	0.11	11.8	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|429216849|ref|YP_007174839.1|	-	0.066	13.3	0.4	0.46	10.6	0.3	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|429216849|ref|YP_007174839.1|	-	0.068	13.0	0.1	0.092	12.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|429216849|ref|YP_007174839.1|	-	0.075	13.2	0.9	0.28	11.4	0.6	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Dynamin_N	PF00350.18	gi|429216849|ref|YP_007174839.1|	-	0.08	12.7	0.1	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	Dynamin	family
T2SE	PF00437.15	gi|429216849|ref|YP_007174839.1|	-	0.08	11.8	0.1	0.14	11.0	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ABC_ATPase	PF09818.4	gi|429216849|ref|YP_007174839.1|	-	0.083	11.4	1.0	7	5.1	0.1	2.4	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
IstB_IS21	PF01695.12	gi|429216849|ref|YP_007174839.1|	-	0.088	12.2	0.1	4.9	6.5	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_17	PF13207.1	gi|429216849|ref|YP_007174839.1|	-	0.091	13.5	0.2	0.18	12.6	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|429216849|ref|YP_007174839.1|	-	0.1	12.1	0.1	0.19	11.2	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
BPD_transp_2	PF02653.11	gi|429216850|ref|YP_007174840.1|	-	2e-27	95.8	40.9	2e-27	95.8	28.3	1.4	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
DUF2929	PF11151.3	gi|429216850|ref|YP_007174840.1|	-	0.068	13.2	1.0	0.068	13.2	0.7	5.0	5	1	0	5	5	5	0	Protein	of	unknown	function	(DUF2929)
BPD_transp_2	PF02653.11	gi|429216851|ref|YP_007174841.1|	-	2.2e-29	102.2	43.2	2.8e-29	101.9	29.9	1.1	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
ISK_Channel	PF02060.10	gi|429216851|ref|YP_007174841.1|	-	0.88	9.1	3.6	0.46	10.0	0.1	2.1	2	0	0	2	2	2	0	Slow	voltage-gated	potassium	channel
YlaC	PF10777.4	gi|429216851|ref|YP_007174841.1|	-	6	6.4	7.1	3.2	7.2	3.0	2.0	2	0	0	2	2	2	0	Inner	membrane	protein	YlaC
DUF1635	PF07795.6	gi|429216852|ref|YP_007174842.1|	-	0.047	13.0	0.2	0.05	12.9	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1635)
DUF2100	PF09873.4	gi|429216852|ref|YP_007174842.1|	-	0.048	13.1	0.3	0.047	13.1	0.2	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2100)
EntA_Immun	PF08951.5	gi|429216852|ref|YP_007174842.1|	-	0.086	12.9	2.3	0.11	12.7	1.5	1.3	1	1	0	1	1	1	0	Enterocin	A	Immunity
DHH	PF01368.15	gi|429216853|ref|YP_007174843.1|	-	2.7e-10	40.0	0.0	5.2e-10	39.1	0.0	1.4	1	0	0	1	1	1	1	DHH	family
NAD_binding_8	PF13450.1	gi|429216854|ref|YP_007174844.1|	-	0.00021	21.2	0.0	0.00059	19.8	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|429216854|ref|YP_007174844.1|	-	0.00034	20.5	0.0	0.0006	19.7	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|429216854|ref|YP_007174844.1|	-	0.024	14.0	0.2	0.25	10.7	0.0	2.2	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
HI0933_like	PF03486.9	gi|429216854|ref|YP_007174844.1|	-	0.033	12.6	0.0	0.056	11.9	0.0	1.3	1	0	0	1	1	1	0	HI0933-like	protein
3HCDH_N	PF02737.13	gi|429216854|ref|YP_007174844.1|	-	0.075	12.6	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DAO	PF01266.19	gi|429216854|ref|YP_007174844.1|	-	0.21	10.4	0.0	0.32	9.8	0.0	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
YscK	PF06578.7	gi|429216855|ref|YP_007174845.1|	-	0.024	14.0	1.1	0.029	13.7	0.5	1.4	1	1	0	1	1	1	0	YOP	proteins	translocation	protein	K	(YscK)
Peripla_BP_6	PF13458.1	gi|429216856|ref|YP_007174846.1|	-	3.7e-45	154.7	2.4	5.2e-45	154.2	1.7	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
Peripla_BP_5	PF13433.1	gi|429216856|ref|YP_007174846.1|	-	4.7e-13	48.6	0.5	1.7e-12	46.8	0.4	1.7	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
ANF_receptor	PF01094.23	gi|429216856|ref|YP_007174846.1|	-	1e-07	31.1	0.6	1.8e-07	30.2	0.4	1.4	1	1	0	1	1	1	1	Receptor	family	ligand	binding	region
DUF21	PF01595.15	gi|429216856|ref|YP_007174846.1|	-	0.0083	15.4	1.8	0.017	14.4	1.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF21
PBCV_basic_adap	PF08789.5	gi|429216856|ref|YP_007174846.1|	-	0.16	11.6	0.9	0.31	10.7	0.6	1.4	1	0	0	1	1	1	0	PBCV-specific	basic	adaptor	domain
Aconitase	PF00330.15	gi|429216857|ref|YP_007174847.1|	-	1.2e-145	485.5	0.0	1.6e-145	485.1	0.0	1.1	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|429216857|ref|YP_007174847.1|	-	7.5e-37	126.3	0.0	1.7e-36	125.1	0.0	1.6	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
NTS_2	PF15448.1	gi|429216857|ref|YP_007174847.1|	-	0.023	14.9	1.6	2.2	8.6	0.0	2.9	3	0	0	3	3	3	0	N-terminal	segments	of	P.	falciparum	erythrocyte	membrane	protein
DUF4353	PF14262.1	gi|429216857|ref|YP_007174847.1|	-	0.13	11.4	0.0	0.21	10.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4353)
Rep_fac_C	PF08542.6	gi|429216858|ref|YP_007174848.1|	-	2.7e-23	81.7	0.7	1.3e-22	79.6	0.0	2.4	3	0	0	3	3	2	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|429216858|ref|YP_007174848.1|	-	6.1e-17	62.0	0.0	1.4e-16	60.8	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|429216858|ref|YP_007174848.1|	-	1.3e-14	54.2	0.1	1.5e-12	47.4	0.1	2.2	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|429216858|ref|YP_007174848.1|	-	1.9e-09	36.7	0.0	2.2e-05	23.3	0.0	2.2	1	1	1	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|429216858|ref|YP_007174848.1|	-	1.2e-08	35.1	0.1	0.0064	16.6	0.0	2.9	2	1	1	3	3	3	2	AAA	domain
RuvB_N	PF05496.7	gi|429216858|ref|YP_007174848.1|	-	1.7e-08	33.7	0.0	4.1e-08	32.5	0.0	1.6	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_3	PF07726.6	gi|429216858|ref|YP_007174848.1|	-	1.4e-06	27.9	0.0	2.3e-06	27.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta	PF06144.8	gi|429216858|ref|YP_007174848.1|	-	4.4e-06	26.3	0.0	8.4e-06	25.4	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_14	PF13173.1	gi|429216858|ref|YP_007174848.1|	-	5.4e-06	26.3	0.0	1e-05	25.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|429216858|ref|YP_007174848.1|	-	6.9e-06	26.1	0.0	0.0021	18.0	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|429216858|ref|YP_007174848.1|	-	8.5e-06	26.0	0.4	0.00038	20.7	0.0	2.7	1	1	1	3	3	3	1	AAA	domain
AAA_5	PF07728.9	gi|429216858|ref|YP_007174848.1|	-	2.3e-05	24.1	0.0	9.5e-05	22.1	0.0	2.0	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|429216858|ref|YP_007174848.1|	-	2.4e-05	23.2	0.0	0.0078	14.9	0.0	2.4	2	0	0	2	2	2	1	TIP49	C-terminus
Sigma54_activ_2	PF14532.1	gi|429216858|ref|YP_007174848.1|	-	5e-05	23.3	0.0	0.00015	21.8	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
FtsK_SpoIIIE	PF01580.13	gi|429216858|ref|YP_007174848.1|	-	0.00011	21.7	0.1	0.00038	19.9	0.0	1.9	2	1	1	3	3	3	1	FtsK/SpoIIIE	family
AAA_17	PF13207.1	gi|429216858|ref|YP_007174848.1|	-	0.00017	22.4	0.1	0.00043	21.0	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|429216858|ref|YP_007174848.1|	-	0.00019	21.1	0.0	0.00038	20.1	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|429216858|ref|YP_007174848.1|	-	0.00026	20.2	0.0	0.0049	16.0	0.0	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|429216858|ref|YP_007174848.1|	-	0.00029	20.2	0.0	0.00075	18.9	0.0	1.7	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_10	PF12846.2	gi|429216858|ref|YP_007174848.1|	-	0.0008	18.9	0.0	0.15	11.5	0.0	2.4	1	1	1	2	2	2	1	AAA-like	domain
PhoH	PF02562.11	gi|429216858|ref|YP_007174848.1|	-	0.001	18.3	0.2	0.15	11.2	0.0	2.4	1	1	0	2	2	2	1	PhoH-like	protein
AAA_25	PF13481.1	gi|429216858|ref|YP_007174848.1|	-	0.0019	17.6	0.3	0.018	14.4	0.2	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|429216858|ref|YP_007174848.1|	-	0.0036	17.2	0.0	0.0066	16.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|429216858|ref|YP_007174848.1|	-	0.0043	16.0	0.0	0.017	14.0	0.0	1.8	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
KTI12	PF08433.5	gi|429216858|ref|YP_007174848.1|	-	0.0044	16.2	0.0	0.007	15.6	0.0	1.3	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_11	PF13086.1	gi|429216858|ref|YP_007174848.1|	-	0.0052	16.3	0.0	0.0067	16.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|429216858|ref|YP_007174848.1|	-	0.0055	15.6	0.0	0.0082	15.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.17	gi|429216858|ref|YP_007174848.1|	-	0.0057	16.8	0.0	0.011	15.8	0.0	1.7	1	1	0	1	1	1	1	RNA	helicase
AAA_28	PF13521.1	gi|429216858|ref|YP_007174848.1|	-	0.0076	16.2	0.0	0.013	15.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DEAD	PF00270.24	gi|429216858|ref|YP_007174848.1|	-	0.0096	15.4	0.1	3.1	7.2	0.0	2.4	1	1	1	2	2	2	1	DEAD/DEAH	box	helicase
AAA_30	PF13604.1	gi|429216858|ref|YP_007174848.1|	-	0.012	15.2	0.1	0.12	11.9	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|429216858|ref|YP_007174848.1|	-	0.012	15.3	0.0	0.035	13.7	0.0	1.8	1	1	0	1	1	1	0	NACHT	domain
AAA_2	PF07724.9	gi|429216858|ref|YP_007174848.1|	-	0.014	15.2	0.0	0.098	12.5	0.0	2.3	2	1	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
SNF2_N	PF00176.18	gi|429216858|ref|YP_007174848.1|	-	0.017	13.9	0.0	1.8	7.2	0.0	2.1	1	1	1	2	2	2	0	SNF2	family	N-terminal	domain
Zeta_toxin	PF06414.7	gi|429216858|ref|YP_007174848.1|	-	0.02	13.9	0.0	0.049	12.7	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activat	PF00158.21	gi|429216858|ref|YP_007174848.1|	-	0.021	14.2	0.1	0.46	9.9	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Viral_helicase1	PF01443.13	gi|429216858|ref|YP_007174848.1|	-	0.022	14.2	0.0	0.032	13.7	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
ResIII	PF04851.10	gi|429216858|ref|YP_007174848.1|	-	0.024	14.4	0.0	0.073	12.9	0.0	1.7	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
DUF2075	PF09848.4	gi|429216858|ref|YP_007174848.1|	-	0.034	13.1	0.1	0.26	10.2	0.0	2.0	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NTPase_1	PF03266.10	gi|429216858|ref|YP_007174848.1|	-	0.046	13.4	0.1	0.42	10.3	0.0	2.3	2	1	1	3	3	2	0	NTPase
AAA_29	PF13555.1	gi|429216858|ref|YP_007174848.1|	-	0.051	13.1	0.0	0.094	12.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|429216858|ref|YP_007174848.1|	-	0.072	11.7	0.0	0.14	10.7	0.0	1.5	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_23	PF13476.1	gi|429216858|ref|YP_007174848.1|	-	0.087	13.1	0.2	0.21	11.8	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|429216859|ref|YP_007174849.1|	-	2.5e-16	60.0	0.0	9e-16	58.2	0.0	2.0	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|429216859|ref|YP_007174849.1|	-	2.2e-10	39.9	0.0	1.2e-09	37.6	0.0	2.1	3	0	0	3	3	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Rad17	PF03215.10	gi|429216859|ref|YP_007174849.1|	-	1.3e-08	33.9	0.2	8.9e-05	21.3	0.1	2.3	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
DUF815	PF05673.8	gi|429216859|ref|YP_007174849.1|	-	5.2e-08	32.1	0.1	4.3e-07	29.1	0.0	2.3	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF815)
DNA_pol3_delta	PF06144.8	gi|429216859|ref|YP_007174849.1|	-	1.6e-07	30.9	0.0	5.9e-07	29.1	0.0	1.9	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_16	PF13191.1	gi|429216859|ref|YP_007174849.1|	-	3.9e-07	30.2	0.0	1.3e-06	28.5	0.0	1.8	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|429216859|ref|YP_007174849.1|	-	8.8e-07	29.7	1.3	5.3e-06	27.2	0.0	2.8	1	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|429216859|ref|YP_007174849.1|	-	3.1e-06	27.3	0.1	5.3e-05	23.3	0.0	2.6	2	1	0	2	2	1	1	AAA	domain
AAA_2	PF07724.9	gi|429216859|ref|YP_007174849.1|	-	3.3e-06	27.1	0.2	6.2e-05	22.9	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
Bac_DnaA	PF00308.13	gi|429216859|ref|YP_007174849.1|	-	6.8e-06	25.8	0.0	5.1e-05	23.0	0.0	2.2	1	1	0	1	1	1	1	Bacterial	dnaA	protein
AAA_14	PF13173.1	gi|429216859|ref|YP_007174849.1|	-	8.1e-06	25.7	0.0	1.7e-05	24.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|429216859|ref|YP_007174849.1|	-	1.5e-05	24.7	0.0	3.6e-05	23.5	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Arch_ATPase	PF01637.13	gi|429216859|ref|YP_007174849.1|	-	0.00019	21.2	0.4	0.00075	19.2	0.0	2.1	2	0	0	2	2	2	1	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|429216859|ref|YP_007174849.1|	-	0.0002	20.5	0.0	0.00046	19.3	0.0	1.6	2	0	0	2	2	1	1	Zeta	toxin
TIP49	PF06068.8	gi|429216859|ref|YP_007174849.1|	-	0.00024	19.9	0.8	0.0071	15.1	0.0	3.0	3	1	1	4	4	4	1	TIP49	C-terminus
Parvo_NS1	PF01057.12	gi|429216859|ref|YP_007174849.1|	-	0.00032	19.6	0.0	0.00077	18.4	0.0	1.6	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|429216859|ref|YP_007174849.1|	-	0.00064	20.0	0.1	0.0046	17.2	0.0	2.4	2	1	0	2	2	2	1	ABC	transporter
IstB_IS21	PF01695.12	gi|429216859|ref|YP_007174849.1|	-	0.0019	17.6	0.0	0.0035	16.7	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DUF258	PF03193.11	gi|429216859|ref|YP_007174849.1|	-	0.002	17.3	0.0	0.0044	16.2	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|429216859|ref|YP_007174849.1|	-	0.0034	17.6	0.8	0.026	14.8	0.0	2.7	3	1	0	3	3	2	1	AAA	domain
NB-ARC	PF00931.17	gi|429216859|ref|YP_007174849.1|	-	0.0051	15.7	0.0	0.011	14.6	0.0	1.6	1	0	0	1	1	1	1	NB-ARC	domain
AAA_24	PF13479.1	gi|429216859|ref|YP_007174849.1|	-	0.0054	16.3	0.0	0.012	15.2	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|429216859|ref|YP_007174849.1|	-	0.0073	15.9	0.0	0.19	11.3	0.0	2.8	1	1	2	3	3	3	1	NACHT	domain
FluMu_gp41	PF10109.4	gi|429216859|ref|YP_007174849.1|	-	0.0073	16.2	0.0	1.6	8.7	0.0	2.8	2	0	0	2	2	2	1	Mu-like	prophage	FluMu	protein	gp41
AAA_33	PF13671.1	gi|429216859|ref|YP_007174849.1|	-	0.015	15.2	0.0	0.032	14.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|429216859|ref|YP_007174849.1|	-	0.018	15.5	0.2	0.14	12.6	0.0	2.5	2	1	0	2	2	2	0	Miro-like	protein
AAA_29	PF13555.1	gi|429216859|ref|YP_007174849.1|	-	0.018	14.5	0.0	0.036	13.6	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|429216859|ref|YP_007174849.1|	-	0.019	14.4	0.0	0.044	13.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|429216859|ref|YP_007174849.1|	-	0.027	14.6	0.0	0.088	12.9	0.0	2.0	1	0	0	1	1	1	0	RNA	helicase
AAA_19	PF13245.1	gi|429216859|ref|YP_007174849.1|	-	0.03	14.0	0.0	0.072	12.8	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_3	PF07726.6	gi|429216859|ref|YP_007174849.1|	-	0.055	13.0	0.0	0.15	11.6	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|429216859|ref|YP_007174849.1|	-	0.067	13.1	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|429216859|ref|YP_007174849.1|	-	0.069	13.1	0.0	0.23	11.4	0.0	2.0	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_21	PF13304.1	gi|429216859|ref|YP_007174849.1|	-	0.095	12.6	4.9	0.22	11.4	0.0	3.0	1	1	2	3	3	3	0	AAA	domain
AAA_11	PF13086.1	gi|429216859|ref|YP_007174849.1|	-	0.12	11.8	3.2	1.8	8.0	2.2	2.2	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|429216859|ref|YP_007174849.1|	-	0.16	11.0	0.0	0.29	10.2	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_23	PF13476.1	gi|429216859|ref|YP_007174849.1|	-	0.52	10.5	0.0	0.52	10.5	0.0	2.7	3	1	0	3	3	1	0	AAA	domain
AA_permease_2	PF13520.1	gi|429216860|ref|YP_007174850.1|	-	1.6e-42	145.5	62.0	1.6e-42	145.5	43.0	2.1	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|429216860|ref|YP_007174850.1|	-	3.2e-34	118.1	53.9	3.2e-34	118.1	37.4	2.4	1	1	1	2	2	2	1	Amino	acid	permease
EI24	PF07264.6	gi|429216861|ref|YP_007174851.1|	-	0.0058	16.0	0.9	0.0058	16.0	0.6	1.0	1	0	0	1	1	1	1	Etoposide-induced	protein	2.4	(EI24)
Tetraspannin	PF00335.15	gi|429216861|ref|YP_007174851.1|	-	0.018	14.3	1.0	0.018	14.3	0.7	1.0	1	0	0	1	1	1	0	Tetraspanin	family
DUF3671	PF12420.3	gi|429216861|ref|YP_007174851.1|	-	0.024	14.5	1.2	0.024	14.5	0.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function
DUF4059	PF13268.1	gi|429216861|ref|YP_007174851.1|	-	0.033	14.3	0.5	0.033	14.3	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4059)
Phospholamban	PF04272.9	gi|429216861|ref|YP_007174851.1|	-	0.035	13.5	0.5	0.035	13.5	0.3	1.1	1	0	0	1	1	1	0	Phospholamban
TctB	PF07331.6	gi|429216861|ref|YP_007174851.1|	-	0.046	13.3	0.6	0.047	13.3	0.4	1.0	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF131	PF01998.12	gi|429216861|ref|YP_007174851.1|	-	0.052	12.9	1.3	0.058	12.7	0.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF131
DUF843	PF05814.6	gi|429216861|ref|YP_007174851.1|	-	0.059	13.1	0.8	0.062	13.1	0.5	1.1	1	0	0	1	1	1	0	Baculovirus	protein	of	unknown	function	(DUF843)
NapE	PF06796.6	gi|429216861|ref|YP_007174851.1|	-	0.11	11.7	0.9	0.12	11.7	0.6	1.2	1	0	0	1	1	1	0	Periplasmic	nitrate	reductase	protein	NapE
Herpes_US9	PF06072.6	gi|429216861|ref|YP_007174851.1|	-	0.15	11.8	0.3	0.16	11.7	0.2	1.1	1	0	0	1	1	1	0	Alphaherpesvirus	tegument	protein	US9
DUF3357	PF11837.3	gi|429216861|ref|YP_007174851.1|	-	0.17	11.7	0.3	0.15	11.9	0.2	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3357)
DUF3753	PF12575.3	gi|429216861|ref|YP_007174851.1|	-	0.2	11.5	1.6	0.18	11.6	1.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
DUF2116	PF09889.4	gi|429216861|ref|YP_007174851.1|	-	0.22	11.3	0.7	0.24	11.2	0.5	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF1510	PF07423.6	gi|429216861|ref|YP_007174851.1|	-	0.31	10.3	1.1	0.3	10.4	0.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1510)
Sigma_reg_N	PF13800.1	gi|429216861|ref|YP_007174851.1|	-	0.64	10.0	2.4	0.67	10.0	1.6	1.0	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
Archease	PF01951.11	gi|429216862|ref|YP_007174852.1|	-	3.4e-43	146.8	3.2	3.8e-43	146.7	2.2	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
DUF2874	PF11396.3	gi|429216862|ref|YP_007174852.1|	-	3.8	7.5	5.6	0.72	9.8	0.2	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2874)
7TMR-DISM_7TM	PF07695.6	gi|429216864|ref|YP_007174854.1|	-	0.97	9.0	20.2	0.019	14.6	3.1	3.0	3	0	0	3	3	3	0	7TM	diverse	intracellular	signalling
NAD_binding_8	PF13450.1	gi|429216865|ref|YP_007174855.1|	-	1.4e-09	37.8	0.1	1.5e-08	34.4	0.1	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|429216865|ref|YP_007174855.1|	-	1.9e-06	27.9	1.0	3.2e-06	27.1	0.3	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|429216865|ref|YP_007174855.1|	-	5.7e-06	25.0	1.1	4.2e-05	22.1	0.3	2.4	3	0	0	3	3	3	1	HI0933-like	protein
GIDA	PF01134.17	gi|429216865|ref|YP_007174855.1|	-	7.2e-06	25.1	0.1	1.4e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|429216865|ref|YP_007174855.1|	-	1.1e-05	24.5	0.0	2.4e-05	23.4	0.0	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|429216865|ref|YP_007174855.1|	-	0.0001	21.3	0.0	0.22	10.4	0.0	2.1	2	0	0	2	2	2	2	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|429216865|ref|YP_007174855.1|	-	0.00031	19.9	0.0	0.00068	18.8	0.0	1.6	1	0	0	1	1	1	1	Thi4	family
Pyr_redox_3	PF13738.1	gi|429216865|ref|YP_007174855.1|	-	0.00045	20.3	0.0	0.00069	19.7	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|429216865|ref|YP_007174855.1|	-	0.00065	18.8	0.0	0.0021	17.2	0.0	1.7	2	0	0	2	2	2	1	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|429216865|ref|YP_007174855.1|	-	0.00079	18.1	0.0	0.75	8.3	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox	PF00070.22	gi|429216865|ref|YP_007174855.1|	-	0.0008	19.7	0.1	0.0048	17.2	0.0	2.4	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|429216865|ref|YP_007174855.1|	-	0.0027	16.6	0.2	0.0038	16.1	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
3HCDH_N	PF02737.13	gi|429216865|ref|YP_007174855.1|	-	0.012	15.2	0.0	0.024	14.2	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|429216865|ref|YP_007174855.1|	-	0.035	14.1	0.9	0.075	13.1	0.1	1.9	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
FAD_oxidored	PF12831.2	gi|429216865|ref|YP_007174855.1|	-	0.045	12.8	0.1	0.076	12.0	0.1	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|429216865|ref|YP_007174855.1|	-	0.047	13.4	0.1	0.15	11.7	0.0	1.9	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|429216865|ref|YP_007174855.1|	-	0.095	12.5	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_9	PF13454.1	gi|429216865|ref|YP_007174855.1|	-	0.1	12.3	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	FAD-NAD(P)-binding
RNA_polI_A14	PF08203.6	gi|429216865|ref|YP_007174855.1|	-	0.12	12.6	0.0	14	5.9	0.0	2.4	2	0	0	2	2	2	0	Yeast	RNA	polymerase	I	subunit	RPA14
AsnC_trans_reg	PF01037.16	gi|429216866|ref|YP_007174856.1|	-	7e-13	48.0	0.2	1e-12	47.5	0.1	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_AsnC-type	PF13404.1	gi|429216866|ref|YP_007174856.1|	-	2.1e-11	43.1	0.2	3.1e-11	42.6	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|429216866|ref|YP_007174856.1|	-	7.1e-10	38.1	3.2	1.4e-09	37.2	2.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|429216866|ref|YP_007174856.1|	-	6.9e-05	22.4	0.2	0.00016	21.2	0.2	1.7	1	0	0	1	1	1	1	HTH	domain
NapD	PF03927.8	gi|429216866|ref|YP_007174856.1|	-	0.0017	18.1	0.3	0.0034	17.1	0.2	1.4	1	0	0	1	1	1	1	NapD	protein
HTH_23	PF13384.1	gi|429216866|ref|YP_007174856.1|	-	0.0027	17.2	0.0	0.0056	16.2	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|429216866|ref|YP_007174856.1|	-	0.0029	17.5	0.1	0.0081	16.1	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|429216866|ref|YP_007174856.1|	-	0.0055	16.3	0.1	0.013	15.1	0.0	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.12	gi|429216866|ref|YP_007174856.1|	-	0.0069	15.9	0.1	0.015	14.9	0.0	1.5	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_20	PF12840.2	gi|429216866|ref|YP_007174856.1|	-	0.011	15.5	0.0	0.023	14.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|429216866|ref|YP_007174856.1|	-	0.011	16.0	0.3	0.031	14.5	0.0	1.8	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
Death	PF00531.17	gi|429216866|ref|YP_007174856.1|	-	0.013	15.2	0.1	0.031	14.0	0.1	1.6	1	0	0	1	1	1	0	Death	domain
B-block_TFIIIC	PF04182.7	gi|429216866|ref|YP_007174856.1|	-	0.015	15.1	0.1	0.15	11.8	0.1	2.2	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
MarR	PF01047.17	gi|429216866|ref|YP_007174856.1|	-	0.016	14.8	0.1	0.036	13.7	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_34	PF13601.1	gi|429216866|ref|YP_007174856.1|	-	0.031	14.3	0.0	0.072	13.1	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|429216866|ref|YP_007174856.1|	-	0.054	13.6	0.6	3.3	7.8	0.0	3.1	3	0	0	3	3	3	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|429216866|ref|YP_007174856.1|	-	0.064	12.9	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|429216866|ref|YP_007174856.1|	-	0.089	12.5	0.0	0.2	11.4	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF2162	PF09930.4	gi|429216866|ref|YP_007174856.1|	-	0.11	11.6	0.2	0.15	11.1	0.1	1.1	1	0	0	1	1	1	0	Predicted	transporter	(DUF2162)
Latexin	PF06907.7	gi|429216866|ref|YP_007174856.1|	-	0.11	11.6	0.3	0.12	11.4	0.2	1.3	1	1	0	1	1	1	0	Latexin
HTH_Crp_2	PF13545.1	gi|429216866|ref|YP_007174856.1|	-	0.11	12.2	0.1	7.8	6.3	0.0	2.9	2	1	1	3	3	3	0	Crp-like	helix-turn-helix	domain
Peptidase_M54	PF07998.6	gi|429216867|ref|YP_007174857.1|	-	1.1e-26	93.8	2.4	1.3e-26	93.5	1.7	1.1	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.19	gi|429216867|ref|YP_007174857.1|	-	0.00058	19.6	0.0	0.00062	19.5	0.0	1.3	1	1	0	1	1	1	1	Matrixin
Reprolysin_2	PF13574.1	gi|429216867|ref|YP_007174857.1|	-	0.0073	16.3	0.0	0.008	16.2	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_4	PF13583.1	gi|429216867|ref|YP_007174857.1|	-	0.012	15.1	0.0	0.015	14.8	0.0	1.3	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Metallopep	PF12044.3	gi|429216867|ref|YP_007174857.1|	-	0.023	13.1	0.1	0.034	12.6	0.1	1.2	1	0	0	1	1	1	0	Putative	peptidase	family
Reprolysin_3	PF13582.1	gi|429216867|ref|YP_007174857.1|	-	0.025	15.1	0.5	0.043	14.3	0.3	1.5	1	1	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_5	PF13688.1	gi|429216867|ref|YP_007174857.1|	-	0.036	13.9	0.2	0.068	13.0	0.1	1.6	1	1	1	2	2	2	0	Metallo-peptidase	family	M12
Peptidase_M66	PF10462.4	gi|429216867|ref|YP_007174857.1|	-	0.075	11.8	0.0	0.11	11.3	0.0	1.2	1	0	0	1	1	1	0	Peptidase	M66
Peptidase_M43	PF05572.8	gi|429216867|ref|YP_007174857.1|	-	0.086	12.4	3.9	0.062	12.8	0.5	2.0	1	1	1	2	2	2	0	Pregnancy-associated	plasma	protein-A
HhH-GPD	PF00730.20	gi|429216868|ref|YP_007174858.1|	-	2.9e-21	75.7	0.0	4e-21	75.3	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
EndIII_4Fe-2S	PF10576.4	gi|429216868|ref|YP_007174858.1|	-	0.0012	18.9	5.6	0.002	18.2	3.9	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH	PF00633.18	gi|429216868|ref|YP_007174858.1|	-	0.002	17.7	0.0	0.0042	16.7	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DUF2400	PF09674.5	gi|429216868|ref|YP_007174858.1|	-	0.0023	17.6	0.0	0.031	13.9	0.0	2.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF2400)
HHH_5	PF14520.1	gi|429216868|ref|YP_007174858.1|	-	0.015	15.4	0.1	0.36	11.0	0.1	2.6	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
Cdc6_C	PF09079.6	gi|429216870|ref|YP_007174860.1|	-	1.7e-16	59.7	0.0	4.1e-16	58.4	0.0	1.7	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|429216870|ref|YP_007174860.1|	-	1.1e-09	38.4	0.0	2.5e-09	37.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_35	PF14516.1	gi|429216870|ref|YP_007174860.1|	-	0.0014	17.3	0.3	0.003	16.2	0.2	1.5	1	0	0	1	1	1	1	AAA-like	domain
NB-ARC	PF00931.17	gi|429216870|ref|YP_007174860.1|	-	0.0045	15.8	0.5	0.0084	14.9	0.0	1.8	2	1	0	2	2	2	1	NB-ARC	domain
Mg_chelatase_2	PF13335.1	gi|429216870|ref|YP_007174860.1|	-	0.0046	17.3	0.1	0.0099	16.2	0.1	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA	PF00004.24	gi|429216870|ref|YP_007174860.1|	-	0.014	15.6	0.0	0.039	14.1	0.0	1.8	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|429216870|ref|YP_007174860.1|	-	0.1	12.5	0.1	0.57	10.1	0.1	2.2	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_24	PF13479.1	gi|429216870|ref|YP_007174860.1|	-	0.15	11.6	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
F-box	PF00646.28	gi|429216870|ref|YP_007174860.1|	-	0.23	11.1	2.6	0.39	10.4	0.0	2.5	3	0	0	3	3	3	0	F-box	domain
NTPase_1	PF03266.10	gi|429216870|ref|YP_007174860.1|	-	0.42	10.3	2.2	0.57	9.8	0.1	2.2	3	0	0	3	3	3	0	NTPase
TBPIP	PF07106.8	gi|429216871|ref|YP_007174861.1|	-	0.00012	21.6	0.2	0.00018	21.1	0.1	1.4	1	1	0	1	1	1	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_20	PF12840.2	gi|429216871|ref|YP_007174861.1|	-	0.00012	21.7	0.0	0.00016	21.4	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|429216871|ref|YP_007174861.1|	-	0.00051	19.6	0.1	0.00073	19.1	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.14	gi|429216871|ref|YP_007174861.1|	-	0.00056	19.5	0.2	0.0008	19.0	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|429216871|ref|YP_007174861.1|	-	0.0013	18.1	0.8	0.0034	16.7	0.5	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF2250	PF10007.4	gi|429216871|ref|YP_007174861.1|	-	0.003	17.4	0.7	0.0035	17.2	0.5	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|429216871|ref|YP_007174861.1|	-	0.0032	17.7	0.1	0.0046	17.2	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|429216871|ref|YP_007174861.1|	-	0.0037	17.3	0.1	0.0052	16.8	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_CodY	PF08222.6	gi|429216871|ref|YP_007174861.1|	-	0.0049	16.1	0.0	0.0066	15.7	0.0	1.3	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|429216871|ref|YP_007174861.1|	-	0.0062	16.0	0.7	0.0085	15.5	0.5	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR_2	PF12802.2	gi|429216871|ref|YP_007174861.1|	-	0.016	14.8	0.0	0.021	14.4	0.0	1.1	1	0	0	1	1	1	0	MarR	family
HTH_45	PF14947.1	gi|429216871|ref|YP_007174861.1|	-	0.017	14.8	0.3	0.026	14.3	0.2	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF1441	PF07278.6	gi|429216871|ref|YP_007174861.1|	-	0.018	14.6	0.0	0.022	14.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1441)
HTH_5	PF01022.15	gi|429216871|ref|YP_007174861.1|	-	0.023	14.3	0.4	0.049	13.2	0.2	1.6	1	1	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_26	PF13443.1	gi|429216871|ref|YP_007174861.1|	-	0.03	14.5	0.3	0.062	13.5	0.1	1.7	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_36	PF13730.1	gi|429216871|ref|YP_007174861.1|	-	0.056	13.5	0.0	0.13	12.4	0.0	1.6	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|429216871|ref|YP_007174861.1|	-	0.06	12.8	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|429216871|ref|YP_007174861.1|	-	0.065	13.0	0.2	0.12	12.2	0.1	1.5	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
MOZ_SAS	PF01853.13	gi|429216871|ref|YP_007174861.1|	-	0.11	11.6	0.0	0.14	11.3	0.0	1.1	1	0	0	1	1	1	0	MOZ/SAS	family
HxlR	PF01638.12	gi|429216871|ref|YP_007174861.1|	-	0.16	11.5	0.5	0.21	11.2	0.4	1.2	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
MoaC	PF01967.16	gi|429216872|ref|YP_007174862.1|	-	2.5e-42	143.7	4.4	2.8e-42	143.6	3.0	1.0	1	0	0	1	1	1	1	MoaC	family
Sld5	PF05916.6	gi|429216873|ref|YP_007174863.1|	-	4.6e-10	39.7	0.5	6.3e-10	39.3	0.4	1.2	1	0	0	1	1	1	1	GINS	complex	protein
MCM	PF00493.18	gi|429216874|ref|YP_007174864.1|	-	2.4e-131	437.4	0.0	3.8e-131	436.8	0.0	1.3	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|429216874|ref|YP_007174864.1|	-	8.1e-27	94.1	0.9	5.4e-26	91.4	0.3	2.6	3	0	0	3	3	3	1	MCM	N-terminal	domain
AAA_5	PF07728.9	gi|429216874|ref|YP_007174864.1|	-	3.3e-06	26.8	0.0	7.5e-06	25.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|429216874|ref|YP_007174864.1|	-	1.6e-05	24.1	0.0	0.0025	16.9	0.0	2.4	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|429216874|ref|YP_007174864.1|	-	4.9e-05	22.9	0.0	0.00011	21.8	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF261	PF03196.8	gi|429216874|ref|YP_007174864.1|	-	0.036	14.0	0.2	0.077	12.9	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF261
DEAD	PF00270.24	gi|429216875|ref|YP_007174865.1|	-	1.5e-27	96.1	0.0	5e-27	94.4	0.0	1.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
HHH_5	PF14520.1	gi|429216875|ref|YP_007174865.1|	-	5.9e-12	45.5	0.0	2.7e-10	40.2	0.0	3.1	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
ResIII	PF04851.10	gi|429216875|ref|YP_007174865.1|	-	9.7e-11	41.8	0.0	3.4e-10	40.0	0.0	1.9	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
HHH_2	PF12826.2	gi|429216875|ref|YP_007174865.1|	-	9.3e-10	38.2	0.0	1.3e-07	31.3	0.0	3.7	3	1	1	4	4	4	1	Helix-hairpin-helix	motif
Helicase_C	PF00271.26	gi|429216875|ref|YP_007174865.1|	-	2e-09	37.1	0.0	5.7e-09	35.7	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH	PF00633.18	gi|429216875|ref|YP_007174865.1|	-	1.2e-06	27.8	0.0	0.0013	18.2	0.0	2.8	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
Arch_ATPase	PF01637.13	gi|429216875|ref|YP_007174865.1|	-	2.7e-05	23.9	0.2	2.7e-05	23.9	0.1	2.7	2	0	0	2	2	2	1	Archaeal	ATPase
T2SE	PF00437.15	gi|429216875|ref|YP_007174865.1|	-	0.0017	17.2	0.0	0.0036	16.2	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DNA_pol_lambd_f	PF10391.4	gi|429216875|ref|YP_007174865.1|	-	0.0018	17.7	0.0	0.014	14.9	0.0	2.6	2	1	1	3	3	3	1	Fingers	domain	of	DNA	polymerase	lambda
SNF2_N	PF00176.18	gi|429216875|ref|YP_007174865.1|	-	0.0059	15.4	0.1	0.015	14.0	0.0	1.7	2	0	0	2	2	2	1	SNF2	family	N-terminal	domain
Sec63	PF02889.11	gi|429216875|ref|YP_007174865.1|	-	0.0064	15.7	0.0	0.013	14.6	0.0	1.5	1	0	0	1	1	1	1	Sec63	Brl	domain
HHH_3	PF12836.2	gi|429216875|ref|YP_007174865.1|	-	0.012	15.5	0.1	0.26	11.2	0.0	2.7	2	1	2	4	4	4	0	Helix-hairpin-helix	motif
AAA_25	PF13481.1	gi|429216875|ref|YP_007174865.1|	-	0.012	14.9	0.0	0.034	13.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Cdd1	PF11731.3	gi|429216875|ref|YP_007174865.1|	-	0.019	14.8	0.0	0.055	13.3	0.0	1.7	1	0	0	1	1	1	0	Pathogenicity	locus
Saccharop_dh	PF03435.13	gi|429216876|ref|YP_007174866.1|	-	4.5e-36	124.6	0.0	5.2e-36	124.4	0.0	1.0	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Semialdhyde_dh	PF01118.19	gi|429216876|ref|YP_007174866.1|	-	9.2e-08	32.4	0.1	2.3e-07	31.1	0.0	1.7	2	0	0	2	2	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|429216876|ref|YP_007174866.1|	-	1.1e-05	25.1	0.0	1.8e-05	24.4	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|429216876|ref|YP_007174866.1|	-	2.7e-05	24.0	0.0	5e-05	23.1	0.0	1.5	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|429216876|ref|YP_007174866.1|	-	0.00011	21.4	0.0	0.00018	20.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|429216876|ref|YP_007174866.1|	-	0.00015	22.2	0.0	0.00033	21.1	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
TrkA_N	PF02254.13	gi|429216876|ref|YP_007174866.1|	-	0.0002	21.3	0.1	0.00096	19.1	0.0	2.1	2	0	0	2	2	2	1	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.9	gi|429216876|ref|YP_007174866.1|	-	0.0004	19.8	0.0	0.00093	18.6	0.0	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429216876|ref|YP_007174866.1|	-	0.00052	19.7	0.0	0.0012	18.6	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Shikimate_DH	PF01488.15	gi|429216876|ref|YP_007174866.1|	-	0.0017	18.4	0.0	0.0032	17.5	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.11	gi|429216876|ref|YP_007174866.1|	-	0.0019	17.6	0.0	0.0034	16.8	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.16	gi|429216876|ref|YP_007174866.1|	-	0.0023	17.5	0.0	0.018	14.6	0.0	2.4	4	0	0	4	4	4	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
F420_oxidored	PF03807.12	gi|429216876|ref|YP_007174866.1|	-	0.006	16.9	0.2	0.014	15.7	0.0	1.8	2	0	0	2	2	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Ldh_1_N	PF00056.18	gi|429216876|ref|YP_007174866.1|	-	0.0094	15.7	0.0	0.017	14.9	0.0	1.4	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|429216876|ref|YP_007174866.1|	-	0.014	15.4	0.0	0.02	14.8	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
Pyr_redox	PF00070.22	gi|429216876|ref|YP_007174866.1|	-	0.018	15.4	0.0	0.39	11.1	0.0	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|429216876|ref|YP_007174866.1|	-	0.02	15.1	0.0	0.04	14.1	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
IlvN	PF07991.7	gi|429216876|ref|YP_007174866.1|	-	0.02	14.2	0.0	0.034	13.5	0.0	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Methyltransf_31	PF13847.1	gi|429216876|ref|YP_007174866.1|	-	0.059	12.9	0.1	0.19	11.3	0.0	1.9	2	1	0	2	2	2	0	Methyltransferase	domain
CoA_binding	PF02629.14	gi|429216876|ref|YP_007174866.1|	-	0.083	13.4	0.0	0.22	12.0	0.0	1.7	1	0	0	1	1	1	0	CoA	binding	domain
JCAD	PF15351.1	gi|429216876|ref|YP_007174866.1|	-	0.34	8.4	0.3	0.43	8.1	0.2	1.0	1	0	0	1	1	1	0	Junctional	protein	associated	with	coronary	artery	disease
RtcB	PF01139.12	gi|429216877|ref|YP_007174867.1|	-	4.4e-149	497.0	0.0	4.9e-149	496.8	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
Ribosomal_L3	PF00297.17	gi|429216878|ref|YP_007174868.1|	-	2.3e-57	194.3	0.0	2.7e-57	194.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L3
Ribosomal_L4	PF00573.17	gi|429216879|ref|YP_007174869.1|	-	9.6e-40	136.0	0.1	1.1e-39	135.8	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L23	PF00276.15	gi|429216880|ref|YP_007174870.1|	-	1.8e-20	72.6	3.2	2.5e-20	72.2	2.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L23
ASL_C	PF08328.6	gi|429216880|ref|YP_007174870.1|	-	0.026	14.3	0.3	0.029	14.2	0.2	1.1	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
ParA	PF10609.4	gi|429216881|ref|YP_007174871.1|	-	8.2e-29	99.3	0.1	2.5e-28	97.7	0.0	1.8	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|429216881|ref|YP_007174871.1|	-	5.1e-14	52.1	0.0	1.1e-13	50.9	0.0	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|429216881|ref|YP_007174871.1|	-	1.3e-07	31.6	0.0	6e-07	29.5	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
Fer4_NifH	PF00142.13	gi|429216881|ref|YP_007174871.1|	-	1e-06	28.1	0.3	0.00065	18.9	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.10	gi|429216881|ref|YP_007174871.1|	-	0.00025	20.1	3.0	0.0008	18.5	0.1	2.4	3	0	0	3	3	3	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|429216881|ref|YP_007174871.1|	-	0.00032	19.8	0.0	0.00049	19.2	0.0	1.5	1	1	0	1	1	1	1	ATPase	MipZ
YhjQ	PF06564.7	gi|429216881|ref|YP_007174871.1|	-	0.0034	16.7	0.1	0.017	14.4	0.0	1.9	2	0	0	2	2	2	1	YhjQ	protein
AAA_30	PF13604.1	gi|429216881|ref|YP_007174871.1|	-	0.0057	16.2	0.0	0.012	15.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|429216881|ref|YP_007174871.1|	-	0.0085	15.5	0.0	0.025	13.9	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_26	PF13500.1	gi|429216881|ref|YP_007174871.1|	-	0.0098	15.5	0.2	3	7.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
InvH	PF04741.7	gi|429216881|ref|YP_007174871.1|	-	0.024	14.4	1.0	2.2	8.1	0.0	2.2	2	0	0	2	2	2	0	InvH	outer	membrane	lipoprotein
AhpC-TSA	PF00578.16	gi|429216882|ref|YP_007174872.1|	-	3.8e-38	129.9	0.1	4.8e-38	129.6	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|429216882|ref|YP_007174872.1|	-	6.1e-15	55.0	0.0	7.3e-15	54.7	0.0	1.1	1	0	0	1	1	1	1	Redoxin
YodA	PF09223.6	gi|429216882|ref|YP_007174872.1|	-	0.097	12.3	0.2	0.2	11.2	0.1	1.6	1	1	0	1	1	1	0	YodA	lipocalin-like	domain
Peptidase_M20	PF01546.23	gi|429216883|ref|YP_007174873.1|	-	3e-35	121.4	0.0	3.7e-35	121.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|429216883|ref|YP_007174873.1|	-	2e-19	69.4	0.2	8.1e-19	67.4	0.0	2.2	3	0	0	3	3	3	1	Peptidase	dimerisation	domain
Clathrin-link	PF09268.5	gi|429216883|ref|YP_007174873.1|	-	0.062	12.3	3.4	0.53	9.3	0.8	2.7	2	0	0	2	2	2	0	Clathrin,	heavy-chain	linker
Peptidase_M28	PF04389.12	gi|429216883|ref|YP_007174873.1|	-	0.1	12.3	0.0	0.28	10.9	0.0	1.6	2	0	0	2	2	2	0	Peptidase	family	M28
PALP	PF00291.20	gi|429216884|ref|YP_007174874.1|	-	8.4e-32	110.6	0.0	1.1e-31	110.1	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Tmemb_9	PF05434.6	gi|429216885|ref|YP_007174875.1|	-	0.078	12.7	2.1	0.08	12.6	1.5	1.1	1	0	0	1	1	1	0	TMEM9
KaiC	PF06745.8	gi|429216886|ref|YP_007174876.1|	-	1.3e-60	204.3	5.5	7.9e-59	198.5	2.1	2.1	2	0	0	2	2	2	2	KaiC
AAA_25	PF13481.1	gi|429216886|ref|YP_007174876.1|	-	3.6e-07	29.7	0.0	1.3e-06	27.9	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
GvpD	PF07088.6	gi|429216886|ref|YP_007174876.1|	-	4.8e-07	28.4	3.0	5.6e-06	24.9	1.6	2.4	2	1	0	2	2	2	1	GvpD	gas	vesicle	protein
AAA_14	PF13173.1	gi|429216886|ref|YP_007174876.1|	-	5e-07	29.6	0.6	1.4e-06	28.2	0.4	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|429216886|ref|YP_007174876.1|	-	1.9e-05	24.9	0.9	5.2e-05	23.5	0.1	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|429216886|ref|YP_007174876.1|	-	7.9e-05	22.8	0.3	0.00025	21.2	0.2	1.8	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|429216886|ref|YP_007174876.1|	-	0.00019	21.2	1.7	0.00019	21.2	1.2	1.8	2	0	0	2	2	2	1	Archaeal	ATPase
DUF2075	PF09848.4	gi|429216886|ref|YP_007174876.1|	-	0.00024	20.2	0.0	0.00033	19.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
DnaB_C	PF03796.10	gi|429216886|ref|YP_007174876.1|	-	0.00046	19.1	0.0	0.00078	18.4	0.0	1.3	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_17	PF13207.1	gi|429216886|ref|YP_007174876.1|	-	0.0012	19.7	0.9	0.0028	18.4	0.3	2.0	2	1	0	2	2	1	1	AAA	domain
ABC_tran	PF00005.22	gi|429216886|ref|YP_007174876.1|	-	0.0012	19.1	0.0	0.0027	18.0	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_24	PF13479.1	gi|429216886|ref|YP_007174876.1|	-	0.0018	17.9	1.9	0.24	10.9	0.3	2.4	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|429216886|ref|YP_007174876.1|	-	0.0069	15.5	0.0	0.011	14.8	0.0	1.2	1	0	0	1	1	1	1	Zeta	toxin
AAA_19	PF13245.1	gi|429216886|ref|YP_007174876.1|	-	0.0078	15.9	0.0	0.016	14.9	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|429216886|ref|YP_007174876.1|	-	0.02	14.8	0.0	0.04	13.9	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.24	gi|429216886|ref|YP_007174876.1|	-	0.021	15.0	1.7	0.13	12.5	0.3	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|429216886|ref|YP_007174876.1|	-	0.03	14.4	0.1	0.98	9.6	0.0	2.4	2	0	0	2	2	2	0	RNA	helicase
ATP-synt_ab	PF00006.20	gi|429216886|ref|YP_007174876.1|	-	0.03	13.8	0.0	0.035	13.5	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_35	PF14516.1	gi|429216886|ref|YP_007174876.1|	-	0.044	12.4	0.0	0.073	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
Miro	PF08477.8	gi|429216886|ref|YP_007174876.1|	-	0.061	13.8	0.0	0.21	12.0	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
MobB	PF03205.9	gi|429216886|ref|YP_007174876.1|	-	0.11	12.2	0.0	1.8	8.2	0.0	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
T2SE	PF00437.15	gi|429216886|ref|YP_007174876.1|	-	0.12	11.2	0.1	0.23	10.3	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
PDH	PF02153.12	gi|429216887|ref|YP_007174877.1|	-	1.6e-13	50.1	0.0	2.3e-13	49.6	0.0	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|429216887|ref|YP_007174877.1|	-	6.5e-07	28.6	0.0	2.9e-06	26.5	0.0	2.0	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|429216887|ref|YP_007174877.1|	-	6.4e-06	26.1	0.1	3.9e-05	23.5	0.0	2.3	3	1	0	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|429216887|ref|YP_007174877.1|	-	1.1e-05	25.7	0.1	0.001	19.4	0.1	2.6	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.13	gi|429216887|ref|YP_007174877.1|	-	0.0002	21.0	0.0	0.00049	19.7	0.0	1.7	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429216887|ref|YP_007174877.1|	-	0.015	15.0	0.0	0.15	11.7	0.0	2.3	1	1	1	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Saccharop_dh	PF03435.13	gi|429216887|ref|YP_007174877.1|	-	0.015	14.2	0.0	0.021	13.7	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|429216887|ref|YP_007174877.1|	-	0.016	14.5	0.3	0.075	12.3	0.2	2.1	1	1	1	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
IlvN	PF07991.7	gi|429216887|ref|YP_007174877.1|	-	0.029	13.7	0.2	0.35	10.2	0.1	2.6	2	1	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
B12-binding	PF02310.14	gi|429216887|ref|YP_007174877.1|	-	0.081	12.8	0.0	0.35	10.7	0.0	2.0	2	0	0	2	2	2	0	B12	binding	domain
TrkA_N	PF02254.13	gi|429216887|ref|YP_007174877.1|	-	0.1	12.5	0.2	0.35	10.8	0.0	2.1	2	1	0	2	2	2	0	TrkA-N	domain
DapB_N	PF01113.15	gi|429216887|ref|YP_007174877.1|	-	0.26	11.2	1.0	1.1	9.1	0.3	2.4	2	1	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
Aminotran_1_2	PF00155.16	gi|429216888|ref|YP_007174878.1|	-	2.9e-42	144.9	0.0	3.4e-42	144.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Alliinase_C	PF04864.8	gi|429216888|ref|YP_007174878.1|	-	1.2e-11	43.9	0.2	4.4e-11	42.0	0.2	1.6	1	1	1	2	2	2	1	Allinase
Aminotran_1_2	PF00155.16	gi|429216889|ref|YP_007174879.1|	-	2.4e-39	135.3	0.0	2.9e-39	135.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|429216889|ref|YP_007174879.1|	-	2.6e-10	39.4	0.0	4e-10	38.8	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.12	gi|429216889|ref|YP_007174879.1|	-	0.00012	21.2	0.0	0.00021	20.4	0.0	1.4	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|429216889|ref|YP_007174879.1|	-	0.073	12.2	0.0	0.12	11.4	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
tRNA_SAD	PF07973.9	gi|429216890|ref|YP_007174880.1|	-	2e-11	43.5	0.9	3.8e-11	42.7	0.6	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.14	gi|429216890|ref|YP_007174880.1|	-	5.5e-08	31.5	0.0	8.2e-08	30.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
Glyco_transf_5	PF08323.6	gi|429216892|ref|YP_007174882.1|	-	5.2e-37	127.6	0.0	7.8e-37	127.0	0.0	1.2	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glycos_transf_1	PF00534.15	gi|429216892|ref|YP_007174882.1|	-	3.5e-22	78.6	0.0	6.4e-22	77.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|429216892|ref|YP_007174882.1|	-	2.3e-07	31.1	0.0	1.3e-06	28.5	0.0	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_4	PF13692.1	gi|429216892|ref|YP_007174882.1|	-	1.6e-06	28.3	0.0	3.1e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|429216892|ref|YP_007174882.1|	-	0.00011	22.4	0.0	0.0011	19.2	0.0	2.4	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|429216892|ref|YP_007174882.1|	-	0.012	15.3	0.0	1.1	8.9	0.0	2.5	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
Glyco_hydro_57	PF03065.10	gi|429216893|ref|YP_007174883.1|	-	1.3e-63	215.1	4.5	1.3e-63	215.1	0.4	2.7	2	1	1	3	3	3	1	Glycosyl	hydrolase	family	57
Phage_Integr_2	PF13009.1	gi|429216893|ref|YP_007174883.1|	-	0.014	14.3	0.1	0.034	13.1	0.0	1.6	1	0	0	1	1	1	0	Putative	phage	integrase
DUF2469	PF10611.4	gi|429216893|ref|YP_007174883.1|	-	0.019	15.2	0.9	0.019	15.2	0.6	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2469)
CBM_3	PF00942.13	gi|429216894|ref|YP_007174884.1|	-	0.11	12.4	0.6	0.49	10.4	0.0	2.2	2	0	0	2	2	2	0	Cellulose	binding	domain
Nitro_FeMo-Co	PF02579.12	gi|429216895|ref|YP_007174885.1|	-	1.2e-11	44.5	0.4	3.8e-11	42.9	0.3	1.8	1	1	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
Spore_YhcN_YlaJ	PF09580.5	gi|429216895|ref|YP_007174885.1|	-	0.0039	17.3	0.0	0.0043	17.1	0.0	1.1	1	0	0	1	1	1	1	Sporulation	lipoprotein	YhcN/YlaJ	(Spore_YhcN_YlaJ)
Zip	PF02535.17	gi|429216895|ref|YP_007174885.1|	-	0.05	12.6	0.4	0.054	12.4	0.3	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
AlaDh_PNT_C	PF01262.16	gi|429216895|ref|YP_007174885.1|	-	0.088	12.3	0.0	0.12	11.9	0.0	1.1	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
BPD_transp_1	PF00528.17	gi|429216896|ref|YP_007174886.1|	-	1.5e-16	60.4	60.8	1.8e-12	47.1	12.6	3.3	2	1	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
Ribosomal_L2	PF00181.18	gi|429216896|ref|YP_007174886.1|	-	0.0071	16.2	2.6	0.046	13.6	0.2	2.6	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
ABC_tran	PF00005.22	gi|429216897|ref|YP_007174887.1|	-	3.4e-28	98.6	0.0	5e-28	98.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429216897|ref|YP_007174887.1|	-	6.8e-11	42.6	1.2	5.2e-05	23.3	0.0	2.3	2	1	0	3	3	2	2	AAA	domain
AAA_22	PF13401.1	gi|429216897|ref|YP_007174887.1|	-	4.9e-05	23.4	0.1	0.0005	20.2	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|429216897|ref|YP_007174887.1|	-	5e-05	23.3	0.1	0.00013	21.9	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|429216897|ref|YP_007174887.1|	-	0.00011	21.4	0.0	0.00014	21.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|429216897|ref|YP_007174887.1|	-	0.0009	18.4	0.2	0.6	9.0	0.1	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|429216897|ref|YP_007174887.1|	-	0.0016	19.2	1.0	0.0028	18.4	0.7	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429216897|ref|YP_007174887.1|	-	0.0018	17.7	0.1	0.0032	16.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|429216897|ref|YP_007174887.1|	-	0.0049	16.1	0.2	0.9	8.7	0.0	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
MobB	PF03205.9	gi|429216897|ref|YP_007174887.1|	-	0.0074	15.9	0.2	0.024	14.3	0.1	2.0	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Arch_ATPase	PF01637.13	gi|429216897|ref|YP_007174887.1|	-	0.022	14.4	0.1	0.038	13.6	0.0	1.6	2	1	0	2	2	2	0	Archaeal	ATPase
AAA_18	PF13238.1	gi|429216897|ref|YP_007174887.1|	-	0.027	14.7	1.1	0.069	13.4	0.3	1.9	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|429216897|ref|YP_007174887.1|	-	0.034	14.0	1.2	0.06	13.3	0.8	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA	PF00004.24	gi|429216897|ref|YP_007174887.1|	-	0.042	14.0	0.1	0.29	11.3	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|429216897|ref|YP_007174887.1|	-	0.042	12.5	0.0	0.061	11.9	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_14	PF13173.1	gi|429216897|ref|YP_007174887.1|	-	0.048	13.5	0.1	0.1	12.4	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|429216897|ref|YP_007174887.1|	-	0.052	13.2	0.1	0.11	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NB-ARC	PF00931.17	gi|429216897|ref|YP_007174887.1|	-	0.057	12.2	0.0	0.14	10.9	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
AAA_33	PF13671.1	gi|429216897|ref|YP_007174887.1|	-	0.074	12.9	0.1	0.087	12.7	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|429216897|ref|YP_007174887.1|	-	0.099	12.8	0.1	0.4	10.8	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
AAA_24	PF13479.1	gi|429216897|ref|YP_007174887.1|	-	0.1	12.1	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|429216897|ref|YP_007174887.1|	-	0.11	11.9	0.8	0.28	10.5	0.1	1.9	2	1	0	2	2	2	0	AAA-like	domain
AAA_23	PF13476.1	gi|429216897|ref|YP_007174887.1|	-	0.12	12.7	0.0	0.27	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|429216897|ref|YP_007174887.1|	-	0.14	10.7	0.0	11	4.4	0.0	2.2	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NACHT	PF05729.7	gi|429216897|ref|YP_007174887.1|	-	0.19	11.3	0.5	0.49	10.0	0.1	1.8	2	0	0	2	2	2	0	NACHT	domain
Cation_efflux	PF01545.16	gi|429216898|ref|YP_007174888.1|	-	5.4e-55	186.4	6.6	7.2e-55	186.0	4.6	1.1	1	0	0	1	1	1	1	Cation	efflux	family
Nitro_FeMo-Co	PF02579.12	gi|429216898|ref|YP_007174888.1|	-	0.0023	17.9	0.2	0.0074	16.3	0.0	1.9	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
NUDIX	PF00293.23	gi|429216899|ref|YP_007174889.1|	-	4e-13	49.1	0.1	4.8e-13	48.9	0.1	1.2	1	1	0	1	1	1	1	NUDIX	domain
Imm45	PF15603.1	gi|429216899|ref|YP_007174889.1|	-	0.0034	17.5	0.0	0.017	15.2	0.0	2.0	2	0	0	2	2	2	1	Immunity	protein	45
Na_H_Exchanger	PF00999.16	gi|429216900|ref|YP_007174890.1|	-	4.7e-48	163.6	58.6	5.9e-48	163.3	40.6	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
NTP_transferase	PF00483.18	gi|429216901|ref|YP_007174891.1|	-	9.2e-41	139.7	0.0	1.2e-40	139.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|429216901|ref|YP_007174891.1|	-	8.3e-08	31.4	8.0	0.038	13.5	0.2	3.8	2	1	1	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.7	gi|429216901|ref|YP_007174891.1|	-	0.038	12.5	1.3	0.065	11.7	0.9	1.4	1	0	0	1	1	1	0	L-fucokinase
NTP_transf_3	PF12804.2	gi|429216901|ref|YP_007174891.1|	-	0.09	12.8	0.0	0.17	11.9	0.0	1.4	1	0	0	1	1	1	0	MobA-like	NTP	transferase	domain
DUF2969	PF11184.3	gi|429216901|ref|YP_007174891.1|	-	0.16	12.0	5.6	0.14	12.2	2.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2969)
Hexapep_2	PF14602.1	gi|429216901|ref|YP_007174891.1|	-	0.22	11.1	4.4	19	4.9	0.8	3.4	2	1	1	3	3	3	0	Hexapeptide	repeat	of	succinyl-transferase
DUF1508	PF07411.7	gi|429216902|ref|YP_007174892.1|	-	0.00061	19.1	0.1	0.00093	18.5	0.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1508)
DpnD-PcfM	PF14207.1	gi|429216902|ref|YP_007174892.1|	-	0.006	16.3	0.4	0.006	16.3	0.3	1.6	2	0	0	2	2	2	1	DpnD/PcfM-like	protein
DUF4494	PF14902.1	gi|429216902|ref|YP_007174892.1|	-	0.082	12.5	0.1	0.082	12.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4494)
Jag_N	PF14804.1	gi|429216902|ref|YP_007174892.1|	-	0.091	12.7	1.6	0.37	10.8	0.1	2.0	2	0	0	2	2	2	0	Jag	N-terminus
Aminotran_3	PF00202.16	gi|429216903|ref|YP_007174893.1|	-	8.5e-113	376.6	0.0	1e-112	376.3	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|429216903|ref|YP_007174893.1|	-	1.3e-05	24.3	0.0	2.9e-05	23.1	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
HTH_24	PF13412.1	gi|429216904|ref|YP_007174894.1|	-	0.0016	17.7	0.4	0.0024	17.2	0.1	1.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|429216904|ref|YP_007174894.1|	-	0.0033	16.8	0.0	0.0039	16.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Mga	PF08280.6	gi|429216904|ref|YP_007174894.1|	-	0.03	14.0	0.1	0.043	13.5	0.0	1.4	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
z-alpha	PF02295.12	gi|429216904|ref|YP_007174894.1|	-	0.066	12.9	0.1	0.086	12.6	0.1	1.1	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
HTH_34	PF13601.1	gi|429216904|ref|YP_007174894.1|	-	0.12	12.4	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|429216905|ref|YP_007174895.1|	-	8.1e-05	21.9	0.0	0.00011	21.5	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|429216905|ref|YP_007174895.1|	-	0.00044	19.9	0.0	0.00057	19.5	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|429216905|ref|YP_007174895.1|	-	0.00083	19.2	0.0	0.0013	18.6	0.0	1.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
FeoC	PF09012.5	gi|429216905|ref|YP_007174895.1|	-	0.00098	18.7	0.0	0.0011	18.5	0.0	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
MarR_2	PF12802.2	gi|429216905|ref|YP_007174895.1|	-	0.0038	16.8	0.0	0.0051	16.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|429216905|ref|YP_007174895.1|	-	0.0044	16.6	0.0	0.006	16.2	0.0	1.3	1	1	0	1	1	1	1	HTH	domain
HTH_36	PF13730.1	gi|429216905|ref|YP_007174895.1|	-	0.0061	16.6	0.1	0.0084	16.2	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|429216905|ref|YP_007174895.1|	-	0.0066	16.7	0.0	0.0092	16.2	0.0	1.3	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|429216905|ref|YP_007174895.1|	-	0.011	15.4	0.0	0.016	14.8	0.0	1.4	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
RepL	PF05732.6	gi|429216905|ref|YP_007174895.1|	-	0.013	14.6	0.0	0.015	14.5	0.0	1.1	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_10	PF04967.7	gi|429216905|ref|YP_007174895.1|	-	0.014	14.9	0.0	0.031	13.8	0.0	1.6	2	0	0	2	2	2	0	HTH	DNA	binding	domain
DUF2250	PF10007.4	gi|429216905|ref|YP_007174895.1|	-	0.017	15.0	0.1	0.02	14.7	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|429216905|ref|YP_007174895.1|	-	0.019	15.0	0.0	0.024	14.7	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_DeoR	PF08220.7	gi|429216905|ref|YP_007174895.1|	-	0.022	14.2	0.0	0.034	13.6	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
IF2_N	PF04760.10	gi|429216905|ref|YP_007174895.1|	-	0.03	13.9	0.2	0.12	12.0	0.1	2.0	1	1	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
B-block_TFIIIC	PF04182.7	gi|429216905|ref|YP_007174895.1|	-	0.052	13.3	0.1	0.069	13.0	0.1	1.2	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Mga	PF05043.8	gi|429216905|ref|YP_007174895.1|	-	0.053	13.7	0.1	0.066	13.5	0.1	1.2	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
NUMOD1	PF07453.8	gi|429216905|ref|YP_007174895.1|	-	0.072	12.9	0.1	0.12	12.2	0.1	1.5	1	0	0	1	1	1	0	NUMOD1	domain
SelB-wing_3	PF09107.6	gi|429216905|ref|YP_007174895.1|	-	0.077	12.3	0.1	0.098	12.0	0.1	1.2	1	0	0	1	1	1	0	Elongation	factor	SelB,	winged	helix
HTH_Crp_2	PF13545.1	gi|429216905|ref|YP_007174895.1|	-	0.14	11.9	0.0	0.23	11.2	0.0	1.5	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
RNA_replicase_B	PF03431.8	gi|429216907|ref|YP_007174897.1|	-	0.1	10.8	0.0	0.12	10.5	0.0	1.0	1	0	0	1	1	1	0	RNA	replicase,	beta-chain
Macro	PF01661.16	gi|429216908|ref|YP_007174898.1|	-	1e-27	96.3	0.1	1.4e-27	95.9	0.1	1.2	1	0	0	1	1	1	1	Macro	domain
Macro_2	PF14519.1	gi|429216908|ref|YP_007174898.1|	-	0.012	14.7	0.1	0.068	12.2	0.1	2.1	1	1	0	1	1	1	0	Macro-like	domain
PALP	PF00291.20	gi|429216909|ref|YP_007174899.1|	-	1.6e-18	67.0	0.0	1.4e-17	63.8	0.0	2.1	1	1	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Zn-ribbon_8	PF09723.5	gi|429216909|ref|YP_007174899.1|	-	0.03	14.2	1.5	0.075	12.9	1.1	1.7	1	0	0	1	1	1	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|429216909|ref|YP_007174899.1|	-	0.037	13.2	2.9	0.059	12.5	2.0	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
AUX_IAA	PF02309.11	gi|429216909|ref|YP_007174899.1|	-	0.088	12.5	0.2	0.13	11.9	0.1	1.3	1	0	0	1	1	1	0	AUX/IAA	family
zf-FPG_IleRS	PF06827.9	gi|429216909|ref|YP_007174899.1|	-	0.24	11.0	0.2	0.24	11.0	0.1	1.9	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|429216909|ref|YP_007174899.1|	-	0.5	9.9	5.4	0.91	9.0	3.4	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
HAD_2	PF13419.1	gi|429216910|ref|YP_007174900.1|	-	1.2e-21	77.7	0.0	1.4e-21	77.4	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|429216910|ref|YP_007174900.1|	-	1e-10	42.4	0.1	1.1e-09	39.0	0.1	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|429216910|ref|YP_007174900.1|	-	4.9e-10	39.8	0.0	7.4e-10	39.2	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|429216910|ref|YP_007174900.1|	-	8.1e-05	22.2	0.0	0.00014	21.4	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|429216910|ref|YP_007174900.1|	-	8.4e-05	22.4	0.1	0.005	16.7	0.0	2.6	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|429216910|ref|YP_007174900.1|	-	0.022	14.3	1.4	1.4	8.4	0.4	2.6	2	1	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
NT5C	PF06941.7	gi|429216910|ref|YP_007174900.1|	-	0.036	13.5	0.0	0.079	12.4	0.0	1.6	1	1	0	1	1	1	0	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
PadR	PF03551.9	gi|429216911|ref|YP_007174901.1|	-	1.1e-13	50.6	0.8	1.6e-13	50.1	0.5	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.1	gi|429216911|ref|YP_007174901.1|	-	5.9e-05	23.0	0.1	7.7e-05	22.6	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|429216911|ref|YP_007174901.1|	-	0.00032	20.4	2.2	0.00032	20.4	1.5	2.1	1	1	1	2	2	2	1	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|429216911|ref|YP_007174901.1|	-	0.0051	16.5	0.6	0.0051	16.5	0.4	2.0	2	1	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
HTH_24	PF13412.1	gi|429216911|ref|YP_007174901.1|	-	0.0098	15.2	1.0	0.24	10.7	0.1	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
YjcQ	PF09639.5	gi|429216911|ref|YP_007174901.1|	-	0.016	15.2	0.5	0.022	14.8	0.3	1.3	1	0	0	1	1	1	0	YjcQ	protein
HTH_27	PF13463.1	gi|429216911|ref|YP_007174901.1|	-	0.065	13.5	0.0	0.086	13.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Aminotran_1_2	PF00155.16	gi|429216912|ref|YP_007174902.1|	-	3.6e-37	128.1	0.0	4.1e-37	127.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|429216912|ref|YP_007174902.1|	-	4.7e-11	41.9	0.0	7.1e-11	41.3	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.12	gi|429216912|ref|YP_007174902.1|	-	0.00034	19.7	0.0	0.0006	18.9	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|429216912|ref|YP_007174902.1|	-	0.0057	14.9	0.0	0.008	14.5	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
CbiA	PF01656.18	gi|429216912|ref|YP_007174902.1|	-	0.02	14.3	0.8	0.048	13.0	0.4	1.7	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Beta_elim_lyase	PF01212.16	gi|429216912|ref|YP_007174902.1|	-	0.068	12.3	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|429216912|ref|YP_007174902.1|	-	0.077	11.7	0.0	0.12	11.1	0.0	1.2	1	0	0	1	1	1	0	Aminotransferase	class-V
tRNA-synt_1d	PF00750.14	gi|429216913|ref|YP_007174903.1|	-	3e-50	171.0	0.7	6.3e-29	100.9	0.3	2.6	1	1	1	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|429216913|ref|YP_007174903.1|	-	2.2e-21	76.0	0.3	7.8e-21	74.2	0.0	2.2	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
tRNA-synt_1e	PF01406.14	gi|429216913|ref|YP_007174903.1|	-	0.00088	18.4	0.0	0.0019	17.3	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
IF2_N	PF04760.10	gi|429216913|ref|YP_007174903.1|	-	0.0052	16.4	0.7	0.5	10.0	0.2	2.9	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
Arg_tRNA_synt_N	PF03485.11	gi|429216913|ref|YP_007174903.1|	-	0.0056	17.1	0.7	0.024	15.1	0.1	2.4	2	0	0	2	2	2	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1	PF00133.17	gi|429216913|ref|YP_007174903.1|	-	0.024	12.6	0.1	0.048	11.6	0.0	1.4	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|429216913|ref|YP_007174903.1|	-	0.029	13.0	0.2	0.13	10.9	0.0	2.1	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(M)
ACT_4	PF13291.1	gi|429216913|ref|YP_007174903.1|	-	0.036	14.3	0.3	0.34	11.2	0.0	2.7	2	0	0	2	2	2	0	ACT	domain
tRNA-synt_1f	PF01921.13	gi|429216913|ref|YP_007174903.1|	-	0.046	12.4	0.1	4.9	5.7	0.0	2.9	2	1	1	3	3	3	0	tRNA	synthetases	class	I	(K)
NicO	PF03824.11	gi|429216914|ref|YP_007174904.1|	-	0.00044	19.6	6.0	0.00044	19.6	4.1	2.4	2	1	1	3	3	3	1	High-affinity	nickel-transport	protein
RE_Eco47II	PF09553.5	gi|429216915|ref|YP_007174905.1|	-	0.0051	15.9	0.8	0.006	15.7	0.6	1.1	1	0	0	1	1	1	1	Eco47II	restriction	endonuclease
Pox_polyA_pol_N	PF12630.2	gi|429216915|ref|YP_007174905.1|	-	0.013	15.5	1.8	0.013	15.5	1.2	1.1	1	0	0	1	1	1	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
Thioredoxin_6	PF13848.1	gi|429216915|ref|YP_007174905.1|	-	0.036	13.8	0.3	0.036	13.8	0.2	1.1	1	0	0	1	1	1	0	Thioredoxin-like	domain
Pox_ser-thr_kin	PF05445.6	gi|429216915|ref|YP_007174905.1|	-	0.051	12.3	2.3	0.054	12.2	1.6	1.1	1	0	0	1	1	1	0	Poxvirus	serine/threonine	protein	kinase
Sec1	PF00995.18	gi|429216915|ref|YP_007174905.1|	-	0.055	12.0	0.3	0.062	11.9	0.2	1.0	1	0	0	1	1	1	0	Sec1	family
TA0956	PF11513.3	gi|429216915|ref|YP_007174905.1|	-	0.096	12.7	0.3	3.9	7.5	0.0	2.0	1	1	1	2	2	2	0	Thermoplasma	acidophilum	protein	TA0956
DUF2779	PF11074.3	gi|429216915|ref|YP_007174905.1|	-	0.17	11.9	1.9	0.27	11.2	0.9	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function(DUF2779)
tRNA-synt_1	PF00133.17	gi|429216916|ref|YP_007174906.1|	-	1.6e-184	614.2	3.2	2.3e-184	613.7	2.2	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|429216916|ref|YP_007174906.1|	-	1.1e-31	109.6	1.4	2.7e-31	108.3	0.9	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|429216916|ref|YP_007174906.1|	-	1.7e-23	82.9	6.4	3.2e-08	32.6	0.0	5.0	3	1	1	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.13	gi|429216916|ref|YP_007174906.1|	-	0.00012	20.8	0.0	0.00049	18.8	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.14	gi|429216916|ref|YP_007174906.1|	-	0.00013	21.2	0.3	0.0019	17.3	0.0	2.7	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
GIIM	PF08388.6	gi|429216916|ref|YP_007174906.1|	-	0.016	15.0	1.5	0.13	12.1	0.2	2.9	2	0	0	2	2	2	0	Group	II	intron,	maturase-specific	domain
Zn-ribbon_8	PF09723.5	gi|429216916|ref|YP_007174906.1|	-	0.045	13.7	1.3	0.6	10.1	0.0	2.9	3	0	0	3	3	3	0	Zinc	ribbon	domain
zf-TFIIB	PF13453.1	gi|429216916|ref|YP_007174906.1|	-	0.054	12.6	1.3	6.6	6.0	0.0	3.1	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
XisH	PF08814.5	gi|429216916|ref|YP_007174906.1|	-	0.18	11.8	4.0	1.1	9.2	0.0	3.3	4	0	0	4	4	4	0	XisH	protein
zf-IS66	PF13005.2	gi|429216916|ref|YP_007174906.1|	-	0.34	10.9	2.6	1.8	8.6	0.1	2.8	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
Mu-like_Com	PF10122.4	gi|429216916|ref|YP_007174906.1|	-	2.9	7.0	3.8	10	5.2	0.0	3.0	3	0	0	3	3	3	0	Mu-like	prophage	protein	Com
Cas_Cas4	PF01930.12	gi|429216917|ref|YP_007174907.1|	-	2.1e-14	53.7	0.0	2.6e-14	53.4	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|429216917|ref|YP_007174907.1|	-	1.1e-11	44.6	2.4	3.6e-09	36.3	0.0	2.1	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
AAA_5	PF07728.9	gi|429216918|ref|YP_007174908.1|	-	3e-18	65.8	0.0	4.9e-18	65.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|429216918|ref|YP_007174908.1|	-	0.00015	21.3	0.0	0.011	15.2	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|429216918|ref|YP_007174908.1|	-	0.00025	21.3	0.1	0.00083	19.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|429216918|ref|YP_007174908.1|	-	0.00026	21.2	1.2	0.0018	18.4	0.2	2.6	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RmlD_sub_bind	PF04321.12	gi|429216918|ref|YP_007174908.1|	-	0.0018	17.2	0.0	0.0027	16.6	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
AAA_16	PF13191.1	gi|429216918|ref|YP_007174908.1|	-	0.0065	16.4	0.0	0.025	14.5	0.0	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
MCM	PF00493.18	gi|429216918|ref|YP_007174908.1|	-	0.0074	15.1	0.7	0.036	12.8	0.1	2.2	2	1	0	3	3	3	1	MCM2/3/5	family
TIP49	PF06068.8	gi|429216918|ref|YP_007174908.1|	-	0.009	14.7	0.1	0.052	12.2	0.0	2.0	2	0	0	2	2	2	1	TIP49	C-terminus
AAA_19	PF13245.1	gi|429216918|ref|YP_007174908.1|	-	0.0097	15.6	0.0	0.027	14.2	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|429216918|ref|YP_007174908.1|	-	0.01	15.3	0.0	4.6	6.6	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|429216918|ref|YP_007174908.1|	-	0.011	16.5	0.7	0.056	14.2	0.4	2.4	1	1	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|429216918|ref|YP_007174908.1|	-	0.018	14.6	0.0	0.029	13.9	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
Sigma54_activ_2	PF14532.1	gi|429216918|ref|YP_007174908.1|	-	0.027	14.5	0.2	0.48	10.4	0.0	2.7	2	1	0	2	2	2	0	Sigma-54	interaction	domain
AAA_22	PF13401.1	gi|429216918|ref|YP_007174908.1|	-	0.028	14.5	0.1	0.5	10.5	0.0	2.6	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|429216918|ref|YP_007174908.1|	-	0.03	13.9	0.0	0.074	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase_2	PF13335.1	gi|429216918|ref|YP_007174908.1|	-	0.054	13.8	0.1	0.18	12.1	0.1	1.9	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Mg_chelatase	PF01078.16	gi|429216918|ref|YP_007174908.1|	-	0.068	12.3	0.1	0.88	8.6	0.0	2.4	3	0	0	3	3	3	0	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|429216918|ref|YP_007174908.1|	-	0.09	12.1	0.0	0.25	10.7	0.0	1.7	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
VWA_CoxE	PF05762.9	gi|429216919|ref|YP_007174909.1|	-	1.5e-18	66.7	0.0	2.4e-18	66.1	0.0	1.2	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
DUF2201	PF09967.4	gi|429216919|ref|YP_007174909.1|	-	0.011	15.7	0.0	0.026	14.5	0.0	1.6	1	0	0	1	1	1	0	VWA-like	domain	(DUF2201)
HrcA	PF01628.16	gi|429216919|ref|YP_007174909.1|	-	0.023	14.2	2.1	1.8	8.0	0.2	2.7	2	0	0	2	2	2	0	HrcA	protein	C	terminal	domain
VWA_2	PF13519.1	gi|429216919|ref|YP_007174909.1|	-	0.053	13.6	0.3	4.6	7.3	0.1	3.0	2	1	0	2	2	2	0	von	Willebrand	factor	type	A	domain
UNC45-central	PF11701.3	gi|429216919|ref|YP_007174909.1|	-	0.13	11.8	4.4	0.072	12.7	0.2	2.6	3	0	0	3	3	3	0	Myosin-binding	striated	muscle	assembly	central
HTH_26	PF13443.1	gi|429216919|ref|YP_007174909.1|	-	0.25	11.5	3.4	7.8	6.7	0.0	3.8	4	0	0	4	4	4	0	Cro/C1-type	HTH	DNA-binding	domain
Radical_SAM	PF04055.16	gi|429216920|ref|YP_007174910.1|	-	2.3e-20	73.4	0.0	3.5e-20	72.8	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|429216920|ref|YP_007174910.1|	-	3.9e-06	26.8	0.1	1.6e-05	24.8	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|429216920|ref|YP_007174910.1|	-	0.0021	18.1	0.2	0.0059	16.7	0.1	1.8	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
LMWPc	PF01451.16	gi|429216920|ref|YP_007174910.1|	-	0.077	13.3	0.0	0.33	11.2	0.0	1.9	1	1	1	2	2	2	0	Low	molecular	weight	phosphotyrosine	protein	phosphatase
ATP_bind_3	PF01171.15	gi|429216921|ref|YP_007174911.1|	-	1.9e-09	37.3	0.0	4.2e-09	36.1	0.0	1.5	1	1	0	1	1	1	1	PP-loop	family
DZR	PF12773.2	gi|429216921|ref|YP_007174911.1|	-	0.00059	19.6	7.5	0.091	12.5	0.2	3.2	3	0	0	3	3	3	2	Double	zinc	ribbon
Glyco_hydro_98M	PF08306.6	gi|429216921|ref|YP_007174911.1|	-	0.0024	16.6	0.0	0.0037	16.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	98
NAD_synthase	PF02540.12	gi|429216921|ref|YP_007174911.1|	-	0.011	14.6	0.1	0.02	13.8	0.0	1.4	1	0	0	1	1	1	0	NAD	synthase
PAPS_reduct	PF01507.14	gi|429216921|ref|YP_007174911.1|	-	0.022	14.5	0.0	0.035	13.9	0.0	1.5	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
NMD3	PF04981.8	gi|429216921|ref|YP_007174911.1|	-	4.2	6.4	10.0	7.1	5.6	0.4	3.2	3	0	0	3	3	3	0	NMD3	family
NUDIX	PF00293.23	gi|429216922|ref|YP_007174912.1|	-	2.4e-16	59.6	0.0	3.2e-16	59.1	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
DUF3536	PF12055.3	gi|429216923|ref|YP_007174913.1|	-	8e-68	228.6	0.0	1.5e-67	227.7	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3536)
Glyco_hydro_57	PF03065.10	gi|429216923|ref|YP_007174913.1|	-	4.1e-24	85.1	0.3	4.2e-23	81.8	0.5	2.2	2	1	0	2	2	2	1	Glycosyl	hydrolase	family	57
Abi	PF02517.11	gi|429216924|ref|YP_007174914.1|	-	3e-10	40.1	9.7	3e-10	40.1	6.7	2.4	1	1	1	2	2	2	1	CAAX	protease	self-immunity
GDC-P	PF02347.11	gi|429216925|ref|YP_007174915.1|	-	1.2e-11	44.0	0.0	1.5e-09	37.1	0.0	2.1	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|429216925|ref|YP_007174915.1|	-	3.5e-05	22.7	0.0	5.9e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|429216925|ref|YP_007174915.1|	-	0.0048	15.8	0.0	0.0097	14.8	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
GDC-P	PF02347.11	gi|429216926|ref|YP_007174916.1|	-	3.5e-106	355.4	0.0	4e-106	355.2	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Glyco_hydro_15	PF00723.16	gi|429216927|ref|YP_007174917.1|	-	4.9e-05	22.0	0.0	0.00034	19.3	0.1	2.0	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	15
Radical_SAM	PF04055.16	gi|429216928|ref|YP_007174918.1|	-	1.3e-29	103.5	0.1	3.7e-27	95.5	0.0	2.2	2	0	0	2	2	2	2	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|429216928|ref|YP_007174918.1|	-	9.2e-27	93.3	0.0	3e-26	91.6	0.0	1.8	2	0	0	2	2	2	1	B12	binding	domain
Fer4_12	PF13353.1	gi|429216928|ref|YP_007174918.1|	-	0.00023	21.3	0.1	0.00047	20.2	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|429216928|ref|YP_007174918.1|	-	0.011	15.8	0.0	0.025	14.6	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Peripla_BP_6	PF13458.1	gi|429216928|ref|YP_007174918.1|	-	0.024	13.9	0.0	0.057	12.7	0.0	1.5	2	0	0	2	2	2	0	Periplasmic	binding	protein
Radical_SAM	PF04055.16	gi|429216929|ref|YP_007174919.1|	-	3.4e-25	89.1	0.0	1.8e-24	86.7	0.0	2.2	2	1	1	3	3	3	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|429216929|ref|YP_007174919.1|	-	2.6e-09	37.3	0.0	7.1e-09	35.9	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|429216929|ref|YP_007174919.1|	-	4.4e-08	33.3	1.5	1e-07	32.1	1.1	1.7	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_14	PF13394.1	gi|429216929|ref|YP_007174919.1|	-	9.3e-08	32.1	0.0	2.2e-07	30.9	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HMGL-like	PF00682.14	gi|429216929|ref|YP_007174919.1|	-	0.0013	18.4	0.0	0.0022	17.7	0.0	1.3	1	0	0	1	1	1	1	HMGL-like
AP_endonuc_2	PF01261.19	gi|429216929|ref|YP_007174919.1|	-	0.037	13.3	0.0	0.1	11.9	0.0	1.8	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
RLL	PF10036.4	gi|429216931|ref|YP_007174921.1|	-	0.0013	18.1	5.0	0.0016	17.9	3.5	1.0	1	0	0	1	1	1	1	Putative	carnitine	deficiency-associated	protein
KfrA_N	PF11740.3	gi|429216931|ref|YP_007174921.1|	-	0.0016	18.8	2.2	0.002	18.5	1.3	1.3	1	1	0	1	1	1	1	Plasmid	replication	region	DNA-binding	N-term
F_actin_bind	PF08919.5	gi|429216931|ref|YP_007174921.1|	-	0.0034	17.0	2.9	0.004	16.8	2.0	1.1	1	0	0	1	1	1	1	F-actin	binding
Apolipoprotein	PF01442.13	gi|429216931|ref|YP_007174921.1|	-	0.0081	15.6	7.9	0.013	15.0	5.4	1.4	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
PMC2NT	PF08066.7	gi|429216931|ref|YP_007174921.1|	-	0.013	15.7	0.9	0.013	15.7	0.6	1.8	1	1	1	2	2	2	0	PMC2NT	(NUC016)	domain
Mer2	PF09074.5	gi|429216931|ref|YP_007174921.1|	-	0.027	14.4	8.2	0.036	14.0	5.7	1.2	1	0	0	1	1	1	0	Mer2
Hom_end	PF05204.9	gi|429216931|ref|YP_007174921.1|	-	0.039	13.9	0.5	0.075	12.9	0.1	1.5	1	1	0	1	1	1	0	Homing	endonuclease
Cep57_MT_bd	PF06657.8	gi|429216931|ref|YP_007174921.1|	-	0.041	13.8	8.7	0.11	12.4	2.5	2.2	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
AAA_13	PF13166.1	gi|429216931|ref|YP_007174921.1|	-	0.041	12.3	13.0	0.043	12.2	9.0	1.0	1	0	0	1	1	1	0	AAA	domain
IMD	PF08397.6	gi|429216931|ref|YP_007174921.1|	-	0.056	12.7	6.7	0.065	12.5	4.6	1.2	1	0	0	1	1	1	0	IRSp53/MIM	homology	domain
TBPIP	PF07106.8	gi|429216931|ref|YP_007174921.1|	-	0.06	12.8	14.8	0.079	12.4	10.2	1.2	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF885	PF05960.6	gi|429216931|ref|YP_007174921.1|	-	0.084	12.0	2.4	0.098	11.8	1.7	1.0	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
FIVAR	PF07554.8	gi|429216931|ref|YP_007174921.1|	-	0.084	13.1	3.0	15	5.8	0.0	3.1	2	1	0	2	2	2	0	Uncharacterised	Sugar-binding	Domain
Z1	PF10593.4	gi|429216931|ref|YP_007174921.1|	-	0.091	11.9	4.5	0.1	11.7	3.1	1.2	1	0	0	1	1	1	0	Z1	domain
CPSase_L_D3	PF02787.14	gi|429216931|ref|YP_007174921.1|	-	0.098	12.4	2.6	0.097	12.4	1.2	1.5	1	1	0	1	1	1	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
DASH_Dad4	PF08650.5	gi|429216931|ref|YP_007174921.1|	-	0.11	12.4	3.3	2.3	8.2	0.4	2.5	2	1	1	3	3	2	0	DASH	complex	subunit	Dad4
Terpene_synth_C	PF03936.11	gi|429216931|ref|YP_007174921.1|	-	0.13	11.5	6.2	0.1	11.8	2.6	1.7	1	1	1	2	2	2	0	Terpene	synthase	family,	metal	binding	domain
VPR	PF00522.13	gi|429216931|ref|YP_007174921.1|	-	0.13	12.0	3.3	4.4	7.1	0.3	2.4	1	1	0	2	2	2	0	VPR/VPX	protein
DUF883	PF05957.8	gi|429216931|ref|YP_007174921.1|	-	0.16	12.3	4.9	0.18	12.2	2.0	1.8	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Hypoth_Ymh	PF09509.5	gi|429216931|ref|YP_007174921.1|	-	0.21	11.2	4.2	2	8.0	0.5	2.7	1	1	2	3	3	3	0	Protein	of	unknown	function	(Hypoth_ymh)
Prominin	PF05478.6	gi|429216931|ref|YP_007174921.1|	-	0.24	8.9	5.2	0.29	8.6	3.6	1.1	1	0	0	1	1	1	0	Prominin
DUF342	PF03961.8	gi|429216931|ref|YP_007174921.1|	-	0.25	9.7	12.5	0.28	9.5	8.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DUF3510	PF12022.3	gi|429216931|ref|YP_007174921.1|	-	0.27	11.3	7.8	0.77	9.8	0.2	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3510)
ApoLp-III	PF07464.6	gi|429216931|ref|YP_007174921.1|	-	0.29	11.1	14.2	0.68	9.9	4.4	2.2	1	1	1	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
KIP1	PF07765.7	gi|429216931|ref|YP_007174921.1|	-	0.3	10.9	6.4	0.39	10.5	2.8	2.1	1	1	1	2	2	2	0	KIP1-like	protein
Snapin_Pallidin	PF14712.1	gi|429216931|ref|YP_007174921.1|	-	0.3	11.4	6.1	0.22	11.8	2.9	1.8	1	1	1	2	2	2	0	Snapin/Pallidin
Peptidase_S46	PF10459.4	gi|429216931|ref|YP_007174921.1|	-	0.31	9.4	5.0	0.34	9.2	3.5	1.1	1	0	0	1	1	1	0	Peptidase	S46
DUF2277	PF10041.4	gi|429216931|ref|YP_007174921.1|	-	0.36	10.8	2.5	6.6	6.7	0.3	2.7	1	1	2	3	3	3	0	Uncharacterized	conserved	protein	(DUF2277)
Mnd1	PF03962.10	gi|429216931|ref|YP_007174921.1|	-	0.4	10.3	11.5	0.48	10.0	8.0	1.2	1	0	0	1	1	1	0	Mnd1	family
DUF4407	PF14362.1	gi|429216931|ref|YP_007174921.1|	-	0.44	9.4	3.2	0.49	9.2	2.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
AATF-Che1	PF13339.1	gi|429216931|ref|YP_007174921.1|	-	0.48	10.5	11.7	1.2	9.2	8.1	1.7	1	1	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
IncA	PF04156.9	gi|429216931|ref|YP_007174921.1|	-	0.51	9.9	15.2	0.74	9.3	10.5	1.3	1	0	0	1	1	1	0	IncA	protein
OmpH	PF03938.9	gi|429216931|ref|YP_007174921.1|	-	0.58	10.0	10.4	0.71	9.7	7.2	1.1	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
TMF_DNA_bd	PF12329.3	gi|429216931|ref|YP_007174921.1|	-	0.59	9.9	20.9	0.28	11.0	1.9	2.6	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
RE_HindIII	PF09518.5	gi|429216931|ref|YP_007174921.1|	-	0.69	8.7	11.0	0.77	8.5	7.6	1.0	1	0	0	1	1	1	0	HindIII	restriction	endonuclease
DUF4168	PF13767.1	gi|429216931|ref|YP_007174921.1|	-	0.7	10.5	4.1	2.4	8.8	2.7	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4168)
DUF2362	PF10154.4	gi|429216931|ref|YP_007174921.1|	-	0.71	8.4	7.5	0.78	8.3	5.2	1.0	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2362)
DUF763	PF05559.6	gi|429216931|ref|YP_007174921.1|	-	0.74	8.7	3.6	0.85	8.5	2.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
DUF641	PF04859.7	gi|429216931|ref|YP_007174921.1|	-	0.82	9.4	11.5	1.2	8.9	0.4	2.2	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
DUF2115	PF09888.4	gi|429216931|ref|YP_007174921.1|	-	0.9	9.6	5.3	1.1	9.3	3.7	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Mitofilin	PF09731.4	gi|429216931|ref|YP_007174921.1|	-	0.95	8.0	17.7	1.1	7.8	12.3	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
YkyA	PF10368.4	gi|429216931|ref|YP_007174921.1|	-	0.97	8.7	17.8	4.6	6.5	12.4	1.9	1	1	0	1	1	1	0	Putative	cell-wall	binding	lipoprotein
PBP_sp32	PF07222.7	gi|429216931|ref|YP_007174921.1|	-	1	8.5	10.6	1.1	8.3	7.4	1.1	1	0	0	1	1	1	0	Proacrosin	binding	protein	sp32
APG6	PF04111.7	gi|429216931|ref|YP_007174921.1|	-	1.1	8.2	13.9	1.5	7.8	9.7	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Laminin_II	PF06009.7	gi|429216931|ref|YP_007174921.1|	-	1.1	9.0	10.8	2	8.1	7.5	1.5	1	1	0	1	1	1	0	Laminin	Domain	II
DUF445	PF04286.7	gi|429216931|ref|YP_007174921.1|	-	1.1	8.6	8.1	1.5	8.3	5.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Syntaxin_2	PF14523.1	gi|429216931|ref|YP_007174921.1|	-	1.3	9.0	9.5	3.3	7.7	6.6	1.7	1	1	0	1	1	1	0	Syntaxin-like	protein
Fib_alpha	PF08702.5	gi|429216931|ref|YP_007174921.1|	-	1.4	9.0	7.2	4.8	7.2	5.0	1.9	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Exonuc_VII_L	PF02601.10	gi|429216931|ref|YP_007174921.1|	-	1.4	8.0	7.7	1.6	7.8	5.4	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF972	PF06156.8	gi|429216931|ref|YP_007174921.1|	-	1.4	9.2	12.2	6	7.2	8.4	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
AAA_32	PF13654.1	gi|429216931|ref|YP_007174921.1|	-	1.7	7.2	10.1	2.8	6.4	7.0	1.5	1	1	0	1	1	1	0	AAA	domain
Spore_III_AB	PF09548.5	gi|429216931|ref|YP_007174921.1|	-	1.8	8.3	8.6	4.4	7.0	5.9	1.8	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
Med4	PF10018.4	gi|429216931|ref|YP_007174921.1|	-	2	7.7	10.8	5.1	6.4	1.6	1.7	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
H-kinase_dim	PF02895.9	gi|429216931|ref|YP_007174921.1|	-	2.2	8.6	5.6	1.5e+02	2.8	3.9	2.9	1	1	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
HSP70	PF00012.15	gi|429216931|ref|YP_007174921.1|	-	2.6	5.8	10.9	2.7	5.7	7.5	1.1	1	0	0	1	1	1	0	Hsp70	protein
Seryl_tRNA_N	PF02403.17	gi|429216931|ref|YP_007174921.1|	-	3	7.8	16.3	56	3.8	11.3	2.2	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
HSCB_C	PF07743.8	gi|429216931|ref|YP_007174921.1|	-	3.3	8.2	10.1	1.3e+02	3.1	7.0	2.6	1	1	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
V_ATPase_I	PF01496.14	gi|429216931|ref|YP_007174921.1|	-	3.4	5.4	9.7	3.7	5.2	6.7	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Uds1	PF15456.1	gi|429216931|ref|YP_007174921.1|	-	3.6	7.6	12.2	2.8	7.9	7.7	1.4	1	1	0	1	1	1	0	Up-regulated	During	Septation
DUF2203	PF09969.4	gi|429216931|ref|YP_007174921.1|	-	3.6	7.8	9.2	56	3.9	6.4	2.0	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
ATP-synt_B	PF00430.13	gi|429216931|ref|YP_007174921.1|	-	4.6	7.0	13.0	7.4	6.3	4.1	2.2	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
TMPIT	PF07851.8	gi|429216931|ref|YP_007174921.1|	-	6.4	5.7	9.4	7.5	5.5	6.5	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
DUF4535	PF15054.1	gi|429216931|ref|YP_007174921.1|	-	9.2	5.7	6.5	1.9	7.9	0.5	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4535)
DUF262	PF03235.9	gi|429216931|ref|YP_007174921.1|	-	9.4	6.1	9.0	12	5.8	6.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF262
UPRTase	PF14681.1	gi|429216932|ref|YP_007174922.1|	-	1.2e-42	145.5	0.0	1.4e-42	145.2	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|429216932|ref|YP_007174922.1|	-	5.5e-07	29.3	0.2	1e-06	28.4	0.2	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
Ribosomal_S15	PF00312.17	gi|429216933|ref|YP_007174923.1|	-	8e-21	73.5	0.5	1.3e-20	72.8	0.1	1.5	2	0	0	2	2	2	1	Ribosomal	protein	S15
Ribosomal_S13_N	PF08069.7	gi|429216933|ref|YP_007174923.1|	-	2.3e-20	72.1	0.1	3.9e-20	71.4	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	S13/S15	N-terminal	domain
3-dmu-9_3-mt	PF06983.8	gi|429216933|ref|YP_007174923.1|	-	0.14	12.4	0.0	0.45	10.8	0.0	1.7	2	0	0	2	2	2	0	3-demethylubiquinone-9	3-methyltransferase
MobB	PF03205.9	gi|429216934|ref|YP_007174924.1|	-	1.2e-06	28.2	0.0	3e-06	26.9	0.0	1.7	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|429216934|ref|YP_007174924.1|	-	0.00012	22.8	0.2	0.00027	21.7	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|429216934|ref|YP_007174924.1|	-	0.00015	20.8	0.0	0.00025	20.0	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
CodY	PF06018.9	gi|429216934|ref|YP_007174924.1|	-	0.00024	20.4	0.2	0.00061	19.1	0.1	1.6	1	0	0	1	1	1	1	CodY	GAF-like	domain
MMR_HSR1	PF01926.18	gi|429216934|ref|YP_007174924.1|	-	0.0016	18.4	2.0	0.0016	18.4	1.4	2.0	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_22	PF13401.1	gi|429216934|ref|YP_007174924.1|	-	0.004	17.2	0.0	0.0078	16.3	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429216934|ref|YP_007174924.1|	-	0.005	16.3	0.0	0.012	15.1	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|429216934|ref|YP_007174924.1|	-	0.0055	16.1	0.0	0.0085	15.5	0.0	1.3	1	0	0	1	1	1	1	AAA-like	domain
Polyoma_lg_T_C	PF06431.6	gi|429216934|ref|YP_007174924.1|	-	0.013	14.1	0.0	0.02	13.5	0.0	1.2	1	0	0	1	1	1	0	Polyomavirus	large	T	antigen	C-terminus
ABC_tran	PF00005.22	gi|429216934|ref|YP_007174924.1|	-	0.016	15.5	0.0	0.039	14.2	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
DUF87	PF01935.12	gi|429216934|ref|YP_007174924.1|	-	0.021	14.6	2.6	0.039	13.7	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_14	PF13173.1	gi|429216934|ref|YP_007174924.1|	-	0.027	14.3	0.5	0.16	11.8	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|429216934|ref|YP_007174924.1|	-	0.029	13.5	0.0	0.058	12.5	0.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
ArgK	PF03308.11	gi|429216934|ref|YP_007174924.1|	-	0.029	13.1	0.0	0.051	12.3	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
GTP_EFTU	PF00009.22	gi|429216934|ref|YP_007174924.1|	-	0.047	13.1	0.0	0.098	12.0	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	Tu	GTP	binding	domain
AAA_23	PF13476.1	gi|429216934|ref|YP_007174924.1|	-	0.76	10.0	17.9	2.7	8.2	12.3	2.1	1	1	0	1	1	1	0	AAA	domain
TrmB	PF01978.14	gi|429216935|ref|YP_007174925.1|	-	1.5e-05	24.6	0.1	4.2e-05	23.1	0.0	1.8	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|429216935|ref|YP_007174925.1|	-	0.0012	18.4	0.0	0.0047	16.4	0.0	1.8	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|429216935|ref|YP_007174925.1|	-	0.011	15.3	0.0	0.012	15.2	0.0	1.3	1	1	0	1	1	1	0	MarR	family
HTH_24	PF13412.1	gi|429216935|ref|YP_007174925.1|	-	0.014	14.7	0.0	0.028	13.7	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|429216935|ref|YP_007174925.1|	-	0.017	14.9	0.0	0.028	14.2	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|429216935|ref|YP_007174925.1|	-	0.024	14.2	0.0	0.03	13.9	0.0	1.2	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF4423	PF14394.1	gi|429216935|ref|YP_007174925.1|	-	0.085	12.3	0.0	0.18	11.3	0.0	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
PyocinActivator	PF11112.3	gi|429216936|ref|YP_007174926.1|	-	0.029	14.2	0.0	0.62	9.9	0.0	2.4	2	0	0	2	2	2	0	Pyocin	activator	protein	PrtN
UDG	PF03167.14	gi|429216937|ref|YP_007174927.1|	-	1.8e-39	134.6	0.0	2.4e-39	134.2	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Cupin_2	PF07883.6	gi|429216938|ref|YP_007174928.1|	-	2.8e-15	55.5	0.2	3.9e-15	55.1	0.2	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.14	gi|429216938|ref|YP_007174928.1|	-	1.2e-10	41.1	0.1	1.6e-10	40.7	0.1	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_7	PF12973.2	gi|429216938|ref|YP_007174928.1|	-	2.2e-06	27.4	0.0	2.8e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	ChrR	Cupin-like	domain
MannoseP_isomer	PF01050.13	gi|429216938|ref|YP_007174928.1|	-	1.4e-05	24.7	0.0	1.6e-05	24.5	0.0	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_1	PF00190.17	gi|429216938|ref|YP_007174928.1|	-	8.3e-05	22.0	0.0	0.00015	21.2	0.0	1.4	1	1	0	1	1	1	1	Cupin
Ectoine_synth	PF06339.7	gi|429216938|ref|YP_007174928.1|	-	0.00021	21.2	0.0	0.00026	20.8	0.0	1.0	1	0	0	1	1	1	1	Ectoine	synthase
Asp_Arg_Hydrox	PF05118.10	gi|429216938|ref|YP_007174928.1|	-	0.0041	16.9	0.0	0.0062	16.3	0.0	1.3	1	1	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Cupin_3	PF05899.7	gi|429216938|ref|YP_007174928.1|	-	0.0091	15.3	0.0	0.013	14.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
EutQ	PF06249.7	gi|429216938|ref|YP_007174928.1|	-	0.01	15.3	0.0	0.016	14.7	0.0	1.3	1	1	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
ARD	PF03079.9	gi|429216938|ref|YP_007174928.1|	-	0.11	12.3	0.7	0.22	11.4	0.1	1.8	1	1	1	2	2	2	0	ARD/ARD'	family
Pirin_C	PF05726.8	gi|429216938|ref|YP_007174928.1|	-	0.14	12.2	0.0	0.18	11.8	0.0	1.2	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
Lon_C	PF05362.8	gi|429216939|ref|YP_007174929.1|	-	0.0097	15.2	0.0	0.017	14.4	0.0	1.3	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
DUF2452	PF10504.4	gi|429216940|ref|YP_007174930.1|	-	0.047	12.9	1.6	3.6	6.8	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2452)
P22_Tail-4	PF11650.3	gi|429216940|ref|YP_007174930.1|	-	0.076	12.5	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	P22	tail	accessory	factor
HTH_3	PF01381.17	gi|429216941|ref|YP_007174931.1|	-	1.8e-05	24.4	0.1	0.00019	21.2	0.0	2.3	1	1	1	2	2	2	1	Helix-turn-helix
HTH_5	PF01022.15	gi|429216941|ref|YP_007174931.1|	-	0.0005	19.6	0.0	0.001	18.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|429216941|ref|YP_007174931.1|	-	0.00066	19.4	0.0	0.0013	18.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|429216941|ref|YP_007174931.1|	-	0.00069	19.6	0.0	0.0015	18.5	0.0	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|429216941|ref|YP_007174931.1|	-	0.0073	15.9	0.0	0.017	14.7	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_IclR	PF09339.5	gi|429216941|ref|YP_007174931.1|	-	0.01	15.4	0.0	0.024	14.2	0.0	1.6	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|429216941|ref|YP_007174931.1|	-	0.039	13.3	0.1	0.13	11.6	0.0	2.1	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_10	PF04967.7	gi|429216941|ref|YP_007174931.1|	-	0.05	13.1	0.0	0.16	11.5	0.0	1.9	2	0	0	2	2	2	0	HTH	DNA	binding	domain
DUF742	PF05331.6	gi|429216941|ref|YP_007174931.1|	-	0.073	12.6	0.0	0.097	12.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
MarR_2	PF12802.2	gi|429216941|ref|YP_007174931.1|	-	0.074	12.7	0.1	0.22	11.2	0.0	1.8	2	0	0	2	2	2	0	MarR	family
HTH_1	PF00126.22	gi|429216941|ref|YP_007174931.1|	-	0.085	12.6	0.0	0.15	11.7	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_40	PF14493.1	gi|429216941|ref|YP_007174931.1|	-	0.1	12.7	0.1	0.13	12.5	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
BON	PF04972.12	gi|429216941|ref|YP_007174931.1|	-	0.16	11.7	0.5	3.2	7.5	0.0	2.4	2	1	1	3	3	3	0	BON	domain
Gp_dh_N	PF00044.19	gi|429216942|ref|YP_007174932.1|	-	1.1e-18	67.6	4.0	1.5e-18	67.1	1.1	2.2	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.15	gi|429216942|ref|YP_007174932.1|	-	1.6e-17	63.4	0.4	2.3e-17	62.8	0.3	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|429216942|ref|YP_007174932.1|	-	1.1e-11	44.6	0.7	3.2e-11	43.2	0.3	2.0	1	1	1	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
2-Hacid_dh_C	PF02826.14	gi|429216942|ref|YP_007174932.1|	-	2.4e-05	23.5	2.1	0.0056	15.8	0.0	2.7	2	1	0	3	3	3	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|429216942|ref|YP_007174932.1|	-	4.9e-05	23.8	0.4	0.001	19.5	0.0	2.9	3	1	0	3	3	3	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
IlvN	PF07991.7	gi|429216942|ref|YP_007174932.1|	-	0.013	14.8	0.6	0.34	10.2	0.4	2.4	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_3	PF03447.11	gi|429216942|ref|YP_007174932.1|	-	0.017	15.4	0.0	0.053	13.9	0.0	1.9	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|429216942|ref|YP_007174932.1|	-	0.032	14.5	0.0	0.074	13.3	0.0	1.6	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|429216942|ref|YP_007174932.1|	-	0.054	13.3	0.4	0.83	9.4	0.1	2.7	2	1	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|429216942|ref|YP_007174932.1|	-	0.089	12.6	1.0	0.95	9.2	0.3	2.4	1	1	1	2	2	2	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
PGK	PF00162.14	gi|429216943|ref|YP_007174933.1|	-	4.6e-109	364.4	0.1	5.2e-109	364.3	0.1	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Lactamase_B_3	PF13483.1	gi|429216944|ref|YP_007174934.1|	-	2e-29	102.4	0.0	2.4e-29	102.1	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|429216944|ref|YP_007174934.1|	-	5.6e-09	35.8	1.0	1.5e-07	31.1	0.7	2.1	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|429216944|ref|YP_007174934.1|	-	0.99	9.0	5.5	1.9	8.1	3.4	1.8	2	1	0	2	2	2	0	Metallo-beta-lactamase	superfamily
KH_1	PF00013.24	gi|429216945|ref|YP_007174935.1|	-	7.7e-07	28.6	9.3	2.8e-05	23.6	2.8	2.6	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|429216945|ref|YP_007174935.1|	-	0.017	14.7	7.5	0.069	12.8	1.8	2.5	2	0	0	2	2	2	0	KH	domain
Phe_tRNA-synt_N	PF02912.13	gi|429216945|ref|YP_007174935.1|	-	0.032	13.9	0.3	0.11	12.2	0.0	2.0	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
RIO1	PF01163.17	gi|429216946|ref|YP_007174936.1|	-	5.7e-60	201.9	0.8	8.4e-60	201.3	0.5	1.2	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.9	gi|429216946|ref|YP_007174936.1|	-	0.0054	15.8	0.0	0.068	12.2	0.0	2.1	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Plasmod_dom_1	PF09715.5	gi|429216946|ref|YP_007174936.1|	-	0.069	13.0	0.2	0.28	11.1	0.2	2.0	1	0	0	1	1	1	0	Plasmodium	protein	of	unknown	function	(Plasmod_dom_1)
APH	PF01636.18	gi|429216946|ref|YP_007174936.1|	-	0.19	11.4	0.0	6.9	6.3	0.0	2.2	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
eIF-1a	PF01176.14	gi|429216947|ref|YP_007174937.1|	-	7.1e-19	66.9	0.1	9.9e-19	66.5	0.1	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
Nramp	PF01566.13	gi|429216948|ref|YP_007174938.1|	-	1.3e-38	132.7	18.5	1.9e-38	132.1	12.8	1.1	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
Thymidylate_kin	PF02223.12	gi|429216949|ref|YP_007174939.1|	-	4.6e-40	136.9	0.1	5.5e-40	136.7	0.1	1.1	1	0	0	1	1	1	1	Thymidylate	kinase
dNK	PF01712.14	gi|429216949|ref|YP_007174939.1|	-	6.8e-05	22.8	1.4	0.00014	21.7	1.0	1.5	1	0	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.1	gi|429216949|ref|YP_007174939.1|	-	0.00015	22.1	0.5	0.00015	22.1	0.3	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|429216949|ref|YP_007174939.1|	-	0.00016	22.4	1.6	0.0028	18.4	0.2	2.5	1	1	1	2	2	2	1	AAA	domain
SKI	PF01202.17	gi|429216949|ref|YP_007174939.1|	-	0.0059	16.4	0.1	0.0098	15.7	0.1	1.6	1	1	0	1	1	1	1	Shikimate	kinase
SpoU_sub_bind	PF08032.7	gi|429216949|ref|YP_007174939.1|	-	0.085	13.0	3.4	0.73	10.0	0.2	3.1	2	1	1	3	3	3	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
IncA	PF04156.9	gi|429216950|ref|YP_007174940.1|	-	0.00019	21.0	0.0	0.00023	20.7	0.0	1.1	1	0	0	1	1	1	1	IncA	protein
PIG-P	PF08510.7	gi|429216950|ref|YP_007174940.1|	-	0.003	17.1	0.1	0.023	14.3	0.0	1.9	2	0	0	2	2	2	1	PIG-P
Wzy_C	PF04932.10	gi|429216950|ref|YP_007174940.1|	-	0.0061	16.3	0.1	0.0072	16.1	0.1	1.0	1	0	0	1	1	1	1	O-Antigen	ligase
Cytochrom_B_C	PF00032.12	gi|429216950|ref|YP_007174940.1|	-	0.009	16.2	0.3	0.011	15.8	0.2	1.1	1	0	0	1	1	1	1	Cytochrome	b(C-terminal)/b6/petD
DUF749	PF05370.6	gi|429216950|ref|YP_007174940.1|	-	0.044	13.7	0.0	0.057	13.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF749)
DUF2254	PF10011.4	gi|429216950|ref|YP_007174940.1|	-	0.044	12.2	1.2	0.1	11.0	0.0	1.8	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2254)
Orbi_VP5	PF00901.12	gi|429216950|ref|YP_007174940.1|	-	0.046	11.9	0.1	0.046	11.9	0.0	1.0	1	0	0	1	1	1	0	Orbivirus	outer	capsid	protein	VP5
OAD_gamma	PF04277.8	gi|429216950|ref|YP_007174940.1|	-	0.075	13.4	6.0	0.93	9.9	0.1	2.1	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
T2SM	PF04612.7	gi|429216950|ref|YP_007174940.1|	-	0.15	11.8	0.8	1.4	8.7	0.0	2.0	2	0	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	M
DUF1625	PF07787.7	gi|429216950|ref|YP_007174940.1|	-	1.3	8.2	6.3	1.7	7.8	4.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1625)
DUF4418	PF14387.1	gi|429216950|ref|YP_007174940.1|	-	2.3	7.9	6.3	3	7.6	4.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4418)
DUF1049	PF06305.6	gi|429216950|ref|YP_007174940.1|	-	4.2	6.9	5.3	0.91	9.0	0.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF3951	PF13131.1	gi|429216950|ref|YP_007174940.1|	-	7.9	6.3	7.3	1.2	8.9	0.7	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3951)
Thioredoxin_2	PF13098.1	gi|429216951|ref|YP_007174941.1|	-	3e-07	30.6	0.3	1.9e-06	28.0	0.2	2.1	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_4	PF13462.1	gi|429216951|ref|YP_007174941.1|	-	0.00033	20.7	0.0	0.00061	19.8	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin
CpXC	PF14353.1	gi|429216951|ref|YP_007174941.1|	-	0.18	11.7	0.2	0.27	11.1	0.2	1.4	1	0	0	1	1	1	0	CpXC	protein
NNMT_PNMT_TEMT	PF01234.12	gi|429216952|ref|YP_007174942.1|	-	0.088	11.7	0.0	0.15	11.0	0.0	1.4	1	1	0	1	1	1	0	NNMT/PNMT/TEMT	family
NAD_binding_2	PF03446.10	gi|429216953|ref|YP_007174943.1|	-	4.7e-24	85.0	0.1	7.9e-24	84.3	0.0	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|429216953|ref|YP_007174943.1|	-	1.7e-14	53.8	0.0	5.3e-14	52.3	0.0	1.7	2	0	0	2	2	2	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|429216953|ref|YP_007174943.1|	-	2.1e-11	44.1	0.0	5.1e-11	42.8	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|429216953|ref|YP_007174943.1|	-	1.3e-09	38.2	0.1	2.8e-09	37.2	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|429216953|ref|YP_007174943.1|	-	1e-06	28.5	0.1	2.3e-06	27.3	0.1	1.7	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.14	gi|429216953|ref|YP_007174943.1|	-	3.8e-06	26.1	0.0	1.2e-05	24.5	0.0	1.7	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|429216953|ref|YP_007174943.1|	-	6.7e-06	25.8	0.3	2.8e-05	23.8	0.0	2.0	2	1	1	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|429216953|ref|YP_007174943.1|	-	9e-06	25.1	0.0	1.8e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ApbA	PF02558.11	gi|429216953|ref|YP_007174943.1|	-	0.00075	18.9	0.0	0.0011	18.3	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
TrkA_N	PF02254.13	gi|429216953|ref|YP_007174943.1|	-	0.0013	18.6	0.1	0.0044	17.0	0.1	1.9	1	1	0	1	1	1	1	TrkA-N	domain
NAD_binding_10	PF13460.1	gi|429216953|ref|YP_007174943.1|	-	0.0013	18.7	0.0	0.0019	18.2	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|429216953|ref|YP_007174943.1|	-	0.009	15.4	0.1	0.32	10.3	0.0	2.7	2	1	1	3	3	3	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|429216953|ref|YP_007174943.1|	-	0.0092	14.9	0.0	0.013	14.5	0.0	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
NAD_binding_7	PF13241.1	gi|429216953|ref|YP_007174943.1|	-	0.016	15.4	0.0	0.033	14.4	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
ThiF	PF00899.16	gi|429216953|ref|YP_007174943.1|	-	0.026	14.3	0.4	0.093	12.5	0.1	2.1	1	1	1	2	2	2	0	ThiF	family
DapB_N	PF01113.15	gi|429216953|ref|YP_007174943.1|	-	0.073	12.9	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
NMD3	PF04981.8	gi|429216954|ref|YP_007174944.1|	-	5e-42	143.6	0.4	5.7e-42	143.4	0.2	1.0	1	0	0	1	1	1	1	NMD3	family
zf-ribbon_3	PF13248.1	gi|429216954|ref|YP_007174944.1|	-	0.0031	16.6	11.6	0.0057	15.8	2.4	3.1	3	0	0	3	3	3	1	zinc-ribbon	domain
DUF965	PF06135.7	gi|429216954|ref|YP_007174944.1|	-	0.023	14.7	1.9	0.25	11.4	0.1	2.7	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF965)
Zn-ribbon_8	PF09723.5	gi|429216954|ref|YP_007174944.1|	-	0.054	13.4	3.6	17	5.4	0.1	3.2	3	0	0	3	3	3	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|429216954|ref|YP_007174944.1|	-	0.21	11.9	2.9	0.89	9.9	1.0	2.3	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-Di19	PF05605.7	gi|429216954|ref|YP_007174944.1|	-	0.25	11.5	3.2	9.2	6.4	0.0	2.6	3	0	0	3	3	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
Rad50_zn_hook	PF04423.9	gi|429216954|ref|YP_007174944.1|	-	0.28	10.6	2.9	1	8.8	0.6	2.4	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF2256	PF10013.4	gi|429216954|ref|YP_007174944.1|	-	0.29	10.9	0.2	0.29	10.9	0.1	2.5	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Spt4	PF06093.8	gi|429216954|ref|YP_007174944.1|	-	0.35	10.7	3.9	1.8	8.5	0.6	2.6	2	1	0	2	2	2	0	Spt4/RpoE2	zinc	finger
DZR	PF12773.2	gi|429216954|ref|YP_007174944.1|	-	0.39	10.5	6.9	2.1	8.2	3.1	2.7	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-TFIIB	PF13453.1	gi|429216954|ref|YP_007174944.1|	-	0.49	9.6	2.7	0.66	9.2	0.6	2.0	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-C3HC4_3	PF13920.1	gi|429216954|ref|YP_007174944.1|	-	2.8	7.7	8.6	26	4.5	0.1	2.9	2	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Cys_rich_CPCC	PF14206.1	gi|429216954|ref|YP_007174944.1|	-	9.2	5.9	7.1	4.8	6.8	0.4	2.9	2	1	1	3	3	3	0	Cysteine-rich	CPCC
zf-RING_5	PF14634.1	gi|429216954|ref|YP_007174944.1|	-	10	5.9	9.8	42	3.9	0.6	3.3	3	0	0	3	3	3	0	zinc-RING	finger	domain
DNA_pol_B	PF00136.16	gi|429216955|ref|YP_007174945.1|	-	1.1e-95	321.1	0.3	1.5e-95	320.7	0.2	1.1	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|429216955|ref|YP_007174945.1|	-	1.7e-37	129.0	10.9	3.6e-37	127.9	5.8	2.5	2	1	0	2	2	2	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|429216955|ref|YP_007174945.1|	-	1.7e-08	34.4	0.2	3.6e-08	33.3	0.2	1.6	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|429216955|ref|YP_007174945.1|	-	2.1e-07	30.6	0.0	3.9e-07	29.8	0.0	1.3	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
HHH_4	PF14490.1	gi|429216955|ref|YP_007174945.1|	-	0.019	14.6	0.0	0.061	13.0	0.0	1.9	1	0	0	1	1	1	0	Helix-hairpin-helix	containing	domain
Exonuc_VII_S	PF02609.11	gi|429216955|ref|YP_007174945.1|	-	0.11	12.2	0.5	1.2	8.9	0.0	2.4	2	0	0	2	2	2	0	Exonuclease	VII	small	subunit
Toprim_4	PF13662.1	gi|429216956|ref|YP_007174946.1|	-	4.4e-09	36.2	0.3	1.2e-08	34.8	0.2	1.7	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|429216956|ref|YP_007174946.1|	-	9.2e-05	22.3	3.4	0.00011	22.0	0.1	2.7	3	1	0	3	3	3	1	Toprim	domain
Toprim_2	PF13155.1	gi|429216956|ref|YP_007174946.1|	-	0.0011	19.2	0.1	0.0063	16.8	0.0	2.3	1	1	1	2	2	2	1	Toprim-like
Tox-PL-2	PF15643.1	gi|429216956|ref|YP_007174946.1|	-	0.043	13.7	0.6	0.18	11.7	0.4	2.1	1	1	0	1	1	1	0	Papain	fold	toxin	2
DUF4435	PF14491.1	gi|429216956|ref|YP_007174946.1|	-	0.19	11.5	3.4	6.6	6.4	0.1	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4435)
tRNA-synt_1b	PF00579.20	gi|429216957|ref|YP_007174947.1|	-	2.6e-52	177.7	1.4	2.7e-50	171.1	0.9	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
SRI	PF08236.6	gi|429216957|ref|YP_007174947.1|	-	5.9	6.9	6.5	2	8.3	0.0	2.7	3	0	0	3	3	3	0	SRI	(Set2	Rpb1	interacting)	domain
UbiD	PF01977.11	gi|429216958|ref|YP_007174948.1|	-	3.5e-90	302.3	0.0	4.3e-90	302.0	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
DUF460	PF04312.8	gi|429216959|ref|YP_007174949.1|	-	0.0098	15.4	0.1	0.019	14.4	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
DUF2051	PF09738.4	gi|429216959|ref|YP_007174949.1|	-	0.019	14.2	0.0	0.026	13.8	0.0	1.1	1	0	0	1	1	1	0	Double	stranded	RNA	binding	protein	(DUF2051)
ROK	PF00480.15	gi|429216960|ref|YP_007174950.1|	-	5.9e-39	133.7	0.1	8.3e-39	133.2	0.1	1.2	1	0	0	1	1	1	1	ROK	family
Hydant_A_N	PF05378.8	gi|429216960|ref|YP_007174950.1|	-	0.01	15.3	0.0	0.017	14.6	0.0	1.3	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase	N-terminal	region
AMP-binding	PF00501.23	gi|429216961|ref|YP_007174951.1|	-	1.9e-78	263.7	0.0	2.5e-78	263.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429216961|ref|YP_007174951.1|	-	1.2e-21	77.3	0.3	2.4e-21	76.4	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
UPF0066	PF01980.11	gi|429216962|ref|YP_007174952.1|	-	1.2e-24	86.6	0.1	1.5e-24	86.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
NfeD	PF01957.13	gi|429216964|ref|YP_007174954.1|	-	8.6e-17	61.6	3.7	1.5e-15	57.6	2.3	2.0	1	1	1	2	2	2	2	NfeD-like	C-terminal,	partner-binding
ABC2_membrane_5	PF13346.1	gi|429216964|ref|YP_007174954.1|	-	0.03	13.5	12.7	0.037	13.3	8.8	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF3169	PF11368.3	gi|429216964|ref|YP_007174954.1|	-	0.036	13.2	5.9	0.049	12.8	4.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3169)
7TMR-DISM_7TM	PF07695.6	gi|429216964|ref|YP_007174954.1|	-	0.072	12.7	10.5	0.088	12.4	7.3	1.1	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
Abi	PF02517.11	gi|429216964|ref|YP_007174954.1|	-	1.6	8.8	5.2	2.4	8.3	3.6	1.2	1	0	0	1	1	1	0	CAAX	protease	self-immunity
Fun_ATP-synt_8	PF05933.8	gi|429216964|ref|YP_007174954.1|	-	4.9	7.2	15.2	0.2	11.7	2.7	2.6	2	1	0	2	2	2	0	Fungal	ATP	synthase	protein	8	(A6L)
Herpes_LMP1	PF05297.6	gi|429216964|ref|YP_007174954.1|	-	9.8	4.9	6.9	12	4.7	4.8	1.1	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
NfeD	PF01957.13	gi|429216965|ref|YP_007174955.1|	-	2e-20	73.4	3.1	2e-20	73.4	2.1	2.8	2	1	1	3	3	3	2	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.18	gi|429216965|ref|YP_007174955.1|	-	2e-05	24.3	3.9	3.8e-05	23.4	2.3	1.8	1	1	0	1	1	1	1	Clp	protease
SDH_sah	PF01972.11	gi|429216965|ref|YP_007174955.1|	-	7e-05	21.7	0.2	9.7e-05	21.2	0.1	1.2	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
Peptidase_S49	PF01343.13	gi|429216965|ref|YP_007174955.1|	-	0.071	12.8	1.1	0.22	11.3	0.2	2.2	2	0	0	2	2	2	0	Peptidase	family	S49
Glyco_hydro_53	PF07745.8	gi|429216965|ref|YP_007174955.1|	-	0.1	11.3	0.7	0.16	10.6	0.0	1.6	2	0	0	2	2	2	0	Glycosyl	hydrolase	family	53
Band_7	PF01145.20	gi|429216966|ref|YP_007174956.1|	-	1e-28	100.4	3.8	1e-28	100.4	2.6	1.6	2	0	0	2	2	2	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|429216966|ref|YP_007174956.1|	-	0.0049	16.4	0.2	0.0075	15.8	0.1	1.3	1	0	0	1	1	1	1	SPFH	domain-Band	7	family
PI3K_1B_p101	PF10486.4	gi|429216966|ref|YP_007174956.1|	-	0.0065	14.1	2.0	0.0088	13.6	1.4	1.1	1	0	0	1	1	1	1	Phosphoinositide	3-kinase	gamma	adapter	protein	p101	subunit
PalH	PF08733.5	gi|429216966|ref|YP_007174956.1|	-	0.61	8.8	5.8	0.94	8.2	4.0	1.3	1	0	0	1	1	1	0	PalH/RIM21
Caudo_TAP	PF02413.12	gi|429216966|ref|YP_007174956.1|	-	2.7	8.1	6.9	0.37	10.9	1.1	2.0	2	0	0	2	2	2	0	Caudovirales	tail	fibre	assembly	protein
DUF4382	PF14321.1	gi|429216967|ref|YP_007174957.1|	-	9.8e-18	64.5	0.1	1.1e-17	64.3	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4382)
RE_Bpu10I	PF09549.5	gi|429216967|ref|YP_007174957.1|	-	0.0081	15.7	0.0	0.011	15.2	0.0	1.1	1	0	0	1	1	1	1	Bpu10I	restriction	endonuclease
DUF4118	PF13493.1	gi|429216967|ref|YP_007174957.1|	-	0.054	13.6	1.7	0.11	12.7	1.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
DUF417	PF04224.7	gi|429216967|ref|YP_007174957.1|	-	0.65	9.3	3.4	0.99	8.7	2.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF417
Bacillus_HBL	PF05791.6	gi|429216968|ref|YP_007174958.1|	-	0.0033	16.8	2.3	0.59	9.4	0.1	2.6	3	0	0	3	3	3	2	Bacillus	haemolytic	enterotoxin	(HBL)
DUF1664	PF07889.7	gi|429216968|ref|YP_007174958.1|	-	0.0077	16.0	4.4	0.61	9.8	0.1	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1664)
MS_channel	PF00924.13	gi|429216968|ref|YP_007174958.1|	-	0.014	14.6	1.6	0.032	13.5	0.9	2.0	1	1	0	1	1	1	0	Mechanosensitive	ion	channel
His_kinase	PF06580.8	gi|429216968|ref|YP_007174958.1|	-	0.21	11.5	1.0	0.39	10.6	0.2	1.8	2	0	0	2	2	2	0	Histidine	kinase
IATP	PF04568.7	gi|429216968|ref|YP_007174958.1|	-	2.9	7.9	5.8	0.71	9.9	1.4	1.9	2	0	0	2	2	2	0	Mitochondrial	ATPase	inhibitor,	IATP
Snf7	PF03357.16	gi|429216969|ref|YP_007174959.1|	-	4.3e-05	22.9	2.1	6.2e-05	22.4	1.4	1.2	1	0	0	1	1	1	1	Snf7
Epimerase_2	PF02350.14	gi|429216969|ref|YP_007174959.1|	-	0.08	11.7	0.1	0.15	10.8	0.1	1.4	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
TrmB	PF01978.14	gi|429216970|ref|YP_007174960.1|	-	5e-12	45.3	1.1	7.7e-11	41.5	0.0	3.0	4	0	0	4	4	4	1	Sugar-specific	transcriptional	regulator	TrmB
Vps5	PF09325.5	gi|429216970|ref|YP_007174960.1|	-	0.0087	15.3	0.1	0.016	14.4	0.0	1.5	1	1	0	1	1	1	1	Vps5	C	terminal	like
CHIPS	PF11434.3	gi|429216970|ref|YP_007174960.1|	-	0.015	14.9	0.3	0.065	12.8	0.1	2.0	2	0	0	2	2	2	0	Chemotaxis-inhibiting	protein	CHIPS
CGI-121	PF08617.5	gi|429216970|ref|YP_007174960.1|	-	0.017	14.7	0.3	0.028	14.1	0.2	1.5	1	1	0	1	1	1	0	Kinase	binding	protein	CGI-121
T2SN	PF01203.14	gi|429216971|ref|YP_007174961.1|	-	0.062	12.8	0.0	0.1	12.1	0.0	1.3	1	1	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	N
Baculo_PEP_C	PF04513.7	gi|429216972|ref|YP_007174962.1|	-	0.046	13.5	0.1	0.065	13.0	0.1	1.1	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
NPV_P10	PF05531.7	gi|429216972|ref|YP_007174962.1|	-	0.074	13.3	0.5	0.14	12.4	0.3	1.5	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
RPW8	PF05659.6	gi|429216972|ref|YP_007174962.1|	-	0.13	11.8	0.0	0.16	11.5	0.0	1.2	1	0	0	1	1	1	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Amidohydro_1	PF01979.15	gi|429216973|ref|YP_007174963.1|	-	7.8e-42	144.1	1.9	9.4e-42	143.8	1.3	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|429216973|ref|YP_007174963.1|	-	2.2e-19	70.5	1.3	5.6e-12	46.2	0.2	2.5	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|429216973|ref|YP_007174963.1|	-	2.6e-13	49.5	0.2	8.6e-13	47.9	0.1	2.0	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|429216973|ref|YP_007174963.1|	-	7.1e-12	45.2	2.6	1e-07	31.5	0.6	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
DeoC	PF01791.4	gi|429216973|ref|YP_007174963.1|	-	0.048	12.9	0.0	1.1	8.5	0.0	2.5	2	2	0	2	2	2	0	DeoC/LacD	family	aldolase
Antiterm	PF03589.8	gi|429216974|ref|YP_007174964.1|	-	0.093	12.8	0.0	0.13	12.4	0.0	1.2	1	0	0	1	1	1	0	Antitermination	protein
AAA_14	PF13173.1	gi|429216974|ref|YP_007174964.1|	-	0.14	12.0	0.1	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MFS_1	PF07690.11	gi|429216975|ref|YP_007174965.1|	-	1.3e-25	89.9	34.8	3.3e-20	72.0	21.8	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|429216975|ref|YP_007174965.1|	-	0.002	17.8	0.7	0.002	17.8	0.5	3.6	3	2	0	3	3	3	2	MFS_1	like	family
MFS_2	PF13347.1	gi|429216975|ref|YP_007174965.1|	-	0.0033	15.9	20.4	0.013	13.9	3.3	2.3	2	0	0	2	2	2	2	MFS/sugar	transport	protein
MFS_3	PF05977.8	gi|429216975|ref|YP_007174965.1|	-	1.2	7.2	8.1	0.78	7.7	4.6	1.7	1	1	1	2	2	2	0	Transmembrane	secretion	effector
Sugar_tr	PF00083.19	gi|429216976|ref|YP_007174966.1|	-	1.1e-20	73.7	29.3	5.3e-19	68.1	1.5	2.4	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|429216976|ref|YP_007174966.1|	-	2.9e-18	65.7	46.1	1.2e-13	50.5	11.8	2.6	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
Radical_SAM	PF04055.16	gi|429216977|ref|YP_007174967.1|	-	5.5e-15	55.9	0.1	8.1e-15	55.3	0.1	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|429216977|ref|YP_007174967.1|	-	4.2e-05	23.5	0.2	0.00014	21.8	0.1	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
DUF2299	PF10061.4	gi|429216979|ref|YP_007174969.1|	-	1.4e-25	89.3	0.7	1.6e-25	89.1	0.5	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
IF-2B	PF01008.12	gi|429216980|ref|YP_007174970.1|	-	3.2e-78	262.5	0.1	3.7e-78	262.3	0.0	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
TPR_15	PF13429.1	gi|429216980|ref|YP_007174970.1|	-	0.0067	15.5	0.3	0.0095	15.0	0.2	1.1	1	0	0	1	1	1	1	Tetratricopeptide	repeat
Iso_dh	PF00180.15	gi|429216981|ref|YP_007174971.1|	-	1.3e-94	317.0	0.0	1.5e-94	316.8	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Hydrolase	PF00702.21	gi|429216982|ref|YP_007174972.1|	-	7.7e-10	39.5	0.0	6e-06	26.8	0.0	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|429216982|ref|YP_007174972.1|	-	2e-09	37.8	0.1	3.4e-09	37.1	0.0	1.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|429216982|ref|YP_007174972.1|	-	0.0017	17.9	0.5	0.028	13.9	0.0	2.1	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|429216982|ref|YP_007174972.1|	-	0.009	15.8	0.0	0.046	13.6	0.0	2.0	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|429216982|ref|YP_007174972.1|	-	0.016	15.4	0.1	0.23	11.6	0.0	2.3	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
DUF123	PF01986.11	gi|429216983|ref|YP_007174973.1|	-	2.9e-17	62.5	0.0	3.9e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
GIY-YIG	PF01541.19	gi|429216983|ref|YP_007174973.1|	-	0.02	15.2	7.3	0.049	13.9	5.1	1.8	1	1	0	1	1	1	0	GIY-YIG	catalytic	domain
CbiA	PF01656.18	gi|429216984|ref|YP_007174974.1|	-	0.0022	17.4	0.1	0.013	14.9	0.1	2.0	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|429216984|ref|YP_007174974.1|	-	0.032	13.8	0.0	2.3	7.7	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|429216984|ref|YP_007174974.1|	-	0.05	13.2	0.0	0.11	12.1	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF981	PF06168.6	gi|429216985|ref|YP_007174975.1|	-	5.1e-41	140.5	18.3	5.9e-41	140.3	12.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
DUF4131	PF13567.1	gi|429216985|ref|YP_007174975.1|	-	0.34	10.3	14.6	0.072	12.4	0.6	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF2306	PF10067.4	gi|429216985|ref|YP_007174975.1|	-	8.7	6.5	7.8	14	5.8	0.3	2.5	2	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2306)
DAO	PF01266.19	gi|429216987|ref|YP_007174977.1|	-	3.2e-23	82.2	0.0	7.4e-23	81.0	0.0	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|429216987|ref|YP_007174977.1|	-	2.7e-06	27.2	0.0	5.9e-06	26.2	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|429216987|ref|YP_007174977.1|	-	0.0021	16.9	0.0	0.0029	16.5	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Thi4	PF01946.12	gi|429216987|ref|YP_007174977.1|	-	0.0028	16.7	0.1	0.0073	15.4	0.0	1.7	2	0	0	2	2	2	1	Thi4	family
GIDA	PF01134.17	gi|429216987|ref|YP_007174977.1|	-	0.0077	15.1	0.1	0.016	14.0	0.0	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.9	gi|429216987|ref|YP_007174977.1|	-	0.0085	15.9	0.0	0.035	13.9	0.0	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|429216987|ref|YP_007174977.1|	-	0.0089	15.7	0.0	0.013	15.1	0.0	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|429216987|ref|YP_007174977.1|	-	0.015	14.6	0.0	0.027	13.8	0.0	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_3	PF01494.14	gi|429216987|ref|YP_007174977.1|	-	0.024	13.6	0.0	0.036	13.1	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
HI0933_like	PF03486.9	gi|429216987|ref|YP_007174977.1|	-	0.064	11.7	0.0	0.091	11.2	0.0	1.2	1	0	0	1	1	1	0	HI0933-like	protein
SAM_adeno_trans	PF01887.11	gi|429216988|ref|YP_007174978.1|	-	5.5e-79	264.8	0.1	6.3e-79	264.6	0.1	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
S1	PF00575.18	gi|429216988|ref|YP_007174978.1|	-	0.29	11.2	5.2	3.3	7.8	0.1	3.3	3	1	0	3	3	3	0	S1	RNA	binding	domain
Aminotran_1_2	PF00155.16	gi|429216989|ref|YP_007174979.1|	-	1.1e-65	221.9	0.0	1.3e-65	221.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|429216989|ref|YP_007174979.1|	-	5e-09	35.6	0.0	7.8e-09	35.0	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|429216989|ref|YP_007174979.1|	-	1.2e-07	30.8	0.0	2.9e-07	29.5	0.0	1.5	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|429216989|ref|YP_007174979.1|	-	1.4e-06	27.6	0.0	2.2e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|429216989|ref|YP_007174979.1|	-	2.6e-06	26.0	0.0	4.8e-06	25.1	0.0	1.4	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
GTP_EFTU_D2	PF03144.20	gi|429216990|ref|YP_007174980.1|	-	0.041	14.0	0.0	0.1	12.7	0.0	1.7	1	0	0	1	1	1	0	Elongation	factor	Tu	domain	2
Nol1_Nop2_Fmu_2	PF13636.1	gi|429216990|ref|YP_007174980.1|	-	0.077	13.0	0.0	4.7	7.3	0.0	2.7	2	1	0	3	3	3	0	pre-rRNA	processing	and	ribosome	biogenesis
DUF2250	PF10007.4	gi|429216992|ref|YP_007174982.1|	-	9.8e-05	22.1	0.2	0.0003	20.6	0.1	1.8	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
PHP	PF02811.14	gi|429216993|ref|YP_007174983.1|	-	2.1e-12	47.2	0.0	2.1e-12	47.2	0.0	1.2	1	0	0	1	1	1	1	PHP	domain
PHP_C	PF13263.1	gi|429216993|ref|YP_007174983.1|	-	8.4e-11	41.2	0.0	1.7e-10	40.2	0.0	1.6	1	0	0	1	1	1	1	PHP-associated
Glycos_transf_2	PF00535.21	gi|429216994|ref|YP_007174984.1|	-	1.4e-18	67.1	0.4	2.2e-18	66.5	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429216994|ref|YP_007174984.1|	-	3.5e-07	30.2	0.0	7.2e-07	29.2	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|429216994|ref|YP_007174984.1|	-	0.00059	20.0	0.0	0.0011	19.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|429216994|ref|YP_007174984.1|	-	0.00098	18.4	0.0	0.0022	17.2	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.1	gi|429216994|ref|YP_007174984.1|	-	0.0017	18.1	0.1	0.0024	17.6	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
GNT-I	PF03071.10	gi|429216994|ref|YP_007174984.1|	-	0.045	12.2	0.0	0.056	11.9	0.0	1.1	1	0	0	1	1	1	0	GNT-I	family
Metallophos	PF00149.23	gi|429216995|ref|YP_007174985.1|	-	1.1e-26	93.5	4.0	1.5e-26	93.0	2.8	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|429216995|ref|YP_007174985.1|	-	7.1e-10	38.9	0.0	9.9e-10	38.4	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Ycf15	PF10705.4	gi|429216995|ref|YP_007174985.1|	-	0.027	14.5	0.0	0.072	13.1	0.0	1.7	1	0	0	1	1	1	0	Chloroplast	protein	precursor	Ycf15	putative
Metallophos_3	PF14582.1	gi|429216995|ref|YP_007174985.1|	-	0.06	12.4	0.0	0.099	11.7	0.0	1.3	1	0	0	1	1	1	0	Metallophosphoesterase,	calcineurin	superfamily
PALP	PF00291.20	gi|429216996|ref|YP_007174986.1|	-	3.2e-43	148.1	0.0	4.7e-43	147.5	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DnaB	PF00772.16	gi|429216996|ref|YP_007174986.1|	-	0.093	12.6	0.5	0.41	10.5	0.0	2.3	3	0	0	3	3	3	0	DnaB-like	helicase	N	terminal	domain
AIRS_C	PF02769.17	gi|429216997|ref|YP_007174987.1|	-	3.1e-06	27.2	0.0	1.2e-05	25.3	0.0	2.0	2	1	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
Acylphosphatase	PF00708.13	gi|429216998|ref|YP_007174988.1|	-	3.2e-22	78.4	0.0	3.8e-22	78.2	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
EspA	PF03433.8	gi|429216998|ref|YP_007174988.1|	-	0.077	12.4	0.0	0.077	12.4	0.0	1.0	1	0	0	1	1	1	0	EspA-like	secreted	protein
TusA	PF01206.12	gi|429216999|ref|YP_007174989.1|	-	1.7e-10	40.3	0.0	2e-10	40.1	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|429216999|ref|YP_007174989.1|	-	0.0038	16.7	0.0	0.0049	16.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
HIT	PF01230.18	gi|429217000|ref|YP_007174990.1|	-	4.6e-24	84.7	0.5	6.2e-24	84.3	0.1	1.4	2	0	0	2	2	2	1	HIT	domain
DcpS_C	PF11969.3	gi|429217000|ref|YP_007174990.1|	-	3.9e-14	52.8	0.9	7.4e-14	51.9	0.3	1.7	1	1	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|429217000|ref|YP_007174990.1|	-	0.00063	19.3	0.0	0.00093	18.8	0.0	1.3	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
CDH	PF02611.10	gi|429217000|ref|YP_007174990.1|	-	0.027	13.7	0.0	0.031	13.5	0.0	1.2	1	0	0	1	1	1	0	CDP-diacylglycerol	pyrophosphatase
DIPSY	PF11763.3	gi|429217000|ref|YP_007174990.1|	-	0.11	12.2	0.0	0.3	10.8	0.0	1.7	1	1	1	2	2	2	0	Cell-wall	adhesin	ligand-binding	C-terminal
Prefoldin_3	PF13758.1	gi|429217000|ref|YP_007174990.1|	-	0.12	12.1	0.1	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Prefoldin	subunit
DUF504	PF04457.7	gi|429217001|ref|YP_007174991.1|	-	7.2e-15	54.8	0.3	1.2e-14	54.1	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
DUF3978	PF13123.1	gi|429217001|ref|YP_007174991.1|	-	0.089	12.1	0.7	0.097	12.0	0.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3978)
Kdo	PF06293.9	gi|429217002|ref|YP_007174992.1|	-	0.1	11.6	0.0	0.45	9.5	0.0	1.9	1	1	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|429217002|ref|YP_007174992.1|	-	0.22	11.2	0.0	1	9.0	0.0	1.7	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
TrmB	PF01978.14	gi|429217003|ref|YP_007174993.1|	-	1.5e-05	24.6	0.2	4.1e-05	23.2	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|429217003|ref|YP_007174993.1|	-	0.00013	21.3	0.0	0.00032	20.0	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
B-block_TFIIIC	PF04182.7	gi|429217003|ref|YP_007174993.1|	-	0.00064	19.5	0.1	0.0015	18.2	0.1	1.7	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_11	PF08279.7	gi|429217003|ref|YP_007174993.1|	-	0.00097	18.7	0.0	0.0023	17.5	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|429217003|ref|YP_007174993.1|	-	0.0015	18.0	0.0	0.0028	17.1	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|429217003|ref|YP_007174993.1|	-	0.0034	17.0	0.0	0.0072	16.0	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|429217003|ref|YP_007174993.1|	-	0.03	14.1	0.0	0.053	13.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
DDRGK	PF09756.4	gi|429217003|ref|YP_007174993.1|	-	0.033	13.6	0.3	0.065	12.6	0.1	1.5	2	0	0	2	2	2	0	DDRGK	domain
Yeast-kill-tox	PF09207.6	gi|429217003|ref|YP_007174993.1|	-	0.32	11.4	3.1	2.3	8.7	0.2	2.2	1	1	1	2	2	2	0	Yeast	killer	toxin
tRNA-synt_1b	PF00579.20	gi|429217004|ref|YP_007174994.1|	-	2.8e-42	144.8	0.0	3.6e-42	144.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.13	gi|429217004|ref|YP_007174994.1|	-	0.1	11.2	0.0	2.3	6.7	0.0	2.1	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
RHH_3	PF12651.2	gi|429217005|ref|YP_007174995.1|	-	1.2e-10	40.9	0.1	1.9e-10	40.3	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_1	PF01402.16	gi|429217005|ref|YP_007174995.1|	-	6.2e-07	29.0	0.0	2.4e-06	27.2	0.0	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
NikR_C	PF08753.6	gi|429217005|ref|YP_007174995.1|	-	0.00014	21.7	0.8	0.0031	17.3	0.1	2.2	1	1	1	2	2	2	1	NikR	C	terminal	nickel	binding	domain
RhoGAP	PF00620.22	gi|429217005|ref|YP_007174995.1|	-	0.026	14.1	0.1	0.17	11.5	0.0	1.9	1	1	1	2	2	2	0	RhoGAP	domain
TENA_THI-4	PF03070.11	gi|429217005|ref|YP_007174995.1|	-	0.029	14.1	0.0	0.036	13.8	0.0	1.2	1	0	0	1	1	1	0	TENA/THI-4/PQQC	family
DUF4441	PF14536.1	gi|429217005|ref|YP_007174995.1|	-	0.046	13.6	0.2	0.069	13.1	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4441)
DUF1351	PF07083.6	gi|429217005|ref|YP_007174995.1|	-	0.065	12.8	0.3	0.23	11.0	0.1	1.7	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1351)
Fe_dep_repress	PF01325.14	gi|429217006|ref|YP_007174996.1|	-	1.6e-11	43.9	0.0	2.7e-11	43.2	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.10	gi|429217006|ref|YP_007174996.1|	-	1.8e-11	43.5	0.2	4.5e-11	42.2	0.0	1.7	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
MarR_2	PF12802.2	gi|429217006|ref|YP_007174996.1|	-	0.00026	20.5	0.0	0.0004	20.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|429217006|ref|YP_007174996.1|	-	0.0003	20.4	0.0	0.0006	19.4	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|429217006|ref|YP_007174996.1|	-	0.00066	19.4	0.0	0.0014	18.3	0.0	1.6	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|429217006|ref|YP_007174996.1|	-	0.0012	18.1	0.0	0.0025	17.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|429217006|ref|YP_007174996.1|	-	0.0014	18.6	0.0	0.005	16.8	0.0	1.9	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
RPA_C	PF08784.6	gi|429217006|ref|YP_007174996.1|	-	0.0018	18.6	0.0	0.0034	17.7	0.0	1.5	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
GntR	PF00392.16	gi|429217006|ref|YP_007174996.1|	-	0.0037	16.6	0.0	0.024	14.0	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
TetR_C_8	PF14278.1	gi|429217006|ref|YP_007174996.1|	-	0.034	14.5	0.1	6.3	7.2	0.0	2.4	2	0	0	2	2	2	0	Transcriptional	regulator	C-terminal	region
Rrf2	PF02082.15	gi|429217006|ref|YP_007174996.1|	-	0.043	13.9	0.0	0.089	12.9	0.0	1.6	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_27	PF13463.1	gi|429217006|ref|YP_007174996.1|	-	0.095	13.0	0.0	0.23	11.8	0.0	1.7	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
Rio2_N	PF09202.6	gi|429217006|ref|YP_007174996.1|	-	0.12	12.4	0.0	0.24	11.4	0.0	1.5	1	0	0	1	1	1	0	Rio2,	N-terminal
Malic_M	PF03949.10	gi|429217007|ref|YP_007174997.1|	-	1.1e-64	218.4	2.3	1.4e-64	218.1	1.6	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|429217007|ref|YP_007174997.1|	-	2.3e-21	76.1	0.0	3e-15	56.2	0.0	2.8	1	1	1	2	2	2	2	Malic	enzyme,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|429217007|ref|YP_007174997.1|	-	0.0019	18.2	0.3	1.1	9.3	0.0	2.5	2	0	0	2	2	2	2	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox_2	PF07992.9	gi|429217007|ref|YP_007174997.1|	-	0.055	13.3	0.1	0.12	12.2	0.0	1.6	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Grp1_Fun34_YaaH	PF01184.14	gi|429217008|ref|YP_007174998.1|	-	7.1e-38	130.0	21.3	8.6e-38	129.7	14.8	1.1	1	0	0	1	1	1	1	GPR1/FUN34/yaaH	family
AMP-binding	PF00501.23	gi|429217009|ref|YP_007174999.1|	-	5.4e-92	308.3	0.0	8.6e-92	307.6	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429217009|ref|YP_007174999.1|	-	1.4e-23	83.6	0.4	2.6e-23	82.7	0.3	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Amidohydro_2	PF04909.9	gi|429217010|ref|YP_007175000.1|	-	5.9e-34	117.8	0.0	4.6e-33	114.9	0.0	2.0	2	0	0	2	2	2	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|429217010|ref|YP_007175000.1|	-	1e-06	28.1	0.0	0.00016	20.9	0.0	2.1	2	0	0	2	2	2	2	TatD	related	DNase
HTH_IclR	PF09339.5	gi|429217011|ref|YP_007175001.1|	-	0.016	14.7	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Mvb12	PF09452.5	gi|429217012|ref|YP_007175002.1|	-	0.0036	17.4	1.2	0.0044	17.1	0.2	1.6	2	0	0	2	2	2	1	ESCRT-I	subunit	Mvb12
CD20	PF04103.10	gi|429217013|ref|YP_007175003.1|	-	0.022	14.6	0.1	0.024	14.5	0.0	1.0	1	0	0	1	1	1	0	CD20-like	family
SBP_bac_5	PF00496.17	gi|429217014|ref|YP_007175004.1|	-	1.6e-55	188.4	2.5	1.6e-55	188.4	1.7	2.0	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|429217014|ref|YP_007175004.1|	-	5.5e-07	29.2	7.6	2.4e-05	24.0	0.1	4.4	4	0	0	4	4	4	2	PKD	domain
DUF2797	PF10977.3	gi|429217015|ref|YP_007175005.1|	-	2.1e-05	24.2	0.0	2.7e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2797)
NTP_transferase	PF00483.18	gi|429217016|ref|YP_007175006.1|	-	1.1e-25	90.4	0.0	1.2e-25	90.2	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|429217016|ref|YP_007175006.1|	-	1e-10	41.9	0.0	1.3e-10	41.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
SBP_bac_5	PF00496.17	gi|429217017|ref|YP_007175007.1|	-	9e-44	149.8	4.9	1.6e-43	149.0	3.4	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|429217017|ref|YP_007175007.1|	-	4.1e-07	29.6	3.1	5e-06	26.1	0.7	3.3	3	0	0	3	3	3	1	PKD	domain
Sigma_reg_N	PF13800.1	gi|429217017|ref|YP_007175007.1|	-	0.01	15.8	1.0	0.058	13.4	0.7	2.3	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
TarH	PF02203.10	gi|429217017|ref|YP_007175007.1|	-	0.017	14.9	1.0	0.034	13.9	0.7	1.4	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
OppC_N	PF12911.2	gi|429217017|ref|YP_007175007.1|	-	0.046	13.0	0.2	0.17	11.2	0.2	2.1	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF3753	PF12575.3	gi|429217017|ref|YP_007175007.1|	-	3.9	7.3	8.5	1.3	8.8	2.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
Rifin_STEVOR	PF02009.11	gi|429217017|ref|YP_007175007.1|	-	5.5	6.5	4.4	9.9	5.6	3.1	1.4	1	0	0	1	1	1	0	Rifin/stevor	family
DUF126	PF01989.11	gi|429217018|ref|YP_007175008.1|	-	3.9e-25	87.3	0.0	6.2e-25	86.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF126
Pec_lyase_C	PF00544.14	gi|429217018|ref|YP_007175008.1|	-	0.067	12.6	0.7	0.076	12.4	0.5	1.3	1	1	0	1	1	1	0	Pectate	lyase
DNA_ligase_OB	PF03120.11	gi|429217018|ref|YP_007175008.1|	-	0.12	12.0	0.1	0.22	11.2	0.1	1.4	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	OB-fold	domain
DUF521	PF04412.8	gi|429217019|ref|YP_007175009.1|	-	7.3e-105	350.7	0.0	8.5e-105	350.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Cons_hypoth95	PF03602.10	gi|429217019|ref|YP_007175009.1|	-	0.051	12.9	0.5	0.093	12.1	0.3	1.4	1	1	0	1	1	1	0	Conserved	hypothetical	protein	95
ICAT	PF06384.6	gi|429217019|ref|YP_007175009.1|	-	0.059	13.1	0.4	1.3	8.8	0.0	2.7	3	0	0	3	3	3	0	Beta-catenin-interacting	protein	ICAT
SMC_N	PF02463.14	gi|429217019|ref|YP_007175009.1|	-	0.12	11.5	0.9	0.22	10.7	0.6	1.4	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
DUF1886	PF09171.5	gi|429217020|ref|YP_007175010.1|	-	0.013	14.5	0.0	0.022	13.7	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1886)
C_tripleX	PF02363.14	gi|429217020|ref|YP_007175010.1|	-	0.69	10.0	4.5	0.29	11.2	0.9	2.0	2	0	0	2	2	2	0	Cysteine	rich	repeat
DUF1803	PF08820.5	gi|429217021|ref|YP_007175011.1|	-	0.04	13.6	0.0	0.053	13.2	0.0	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
PNP_UDP_1	PF01048.15	gi|429217022|ref|YP_007175012.1|	-	3.5e-34	117.7	0.0	4e-34	117.6	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
MFS_1	PF07690.11	gi|429217023|ref|YP_007175013.1|	-	1.2e-38	132.8	74.2	2.7e-27	95.4	28.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|429217023|ref|YP_007175013.1|	-	5.6e-08	31.5	39.3	5.6e-08	31.5	27.2	1.8	1	1	1	2	2	2	1	MFS/sugar	transport	protein
Usp	PF00582.21	gi|429217024|ref|YP_007175014.1|	-	1.3e-31	109.6	0.1	1.6e-31	109.3	0.0	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Alba	PF01918.16	gi|429217025|ref|YP_007175015.1|	-	0.0028	17.2	0.2	0.0036	16.8	0.2	1.3	1	0	0	1	1	1	1	Alba
SARS_3b	PF12383.3	gi|429217025|ref|YP_007175015.1|	-	0.019	14.8	0.1	0.019	14.8	0.1	1.1	1	0	0	1	1	1	0	Severe	acute	respiratory	syndrome	coronavirus	3b	protein
Topoisom_bac	PF01131.15	gi|429217026|ref|YP_007175016.1|	-	1.6e-81	274.1	5.9	2.2e-81	273.7	4.1	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|429217026|ref|YP_007175016.1|	-	1e-22	79.9	0.3	9.2e-22	76.9	0.0	2.7	3	0	0	3	3	3	1	Toprim	domain
DEAD	PF00270.24	gi|429217026|ref|YP_007175016.1|	-	3.8e-17	62.2	0.1	9.7e-16	57.7	0.0	3.1	4	1	0	4	4	4	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|429217026|ref|YP_007175016.1|	-	4.4e-07	29.9	0.0	1.2e-06	28.4	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
zinc_ribbon_2	PF13240.1	gi|429217026|ref|YP_007175016.1|	-	0.00067	19.0	5.9	0.18	11.3	1.1	2.6	2	0	0	2	2	2	2	zinc-ribbon	domain
UPF0547	PF10571.4	gi|429217026|ref|YP_007175016.1|	-	0.0024	17.5	7.0	1.1	9.0	0.0	3.3	3	0	0	3	3	3	2	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|429217026|ref|YP_007175016.1|	-	0.0025	16.9	8.6	0.075	12.2	0.6	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
Helicase_C	PF00271.26	gi|429217026|ref|YP_007175016.1|	-	0.0027	17.5	0.0	0.31	10.9	0.0	3.5	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DZR	PF12773.2	gi|429217026|ref|YP_007175016.1|	-	0.0058	16.4	5.0	0.095	12.5	0.5	2.3	2	0	0	2	2	2	1	Double	zinc	ribbon
Toprim_4	PF13662.1	gi|429217026|ref|YP_007175016.1|	-	0.0077	16.2	0.0	0.049	13.6	0.0	2.4	2	0	0	2	2	2	1	Toprim	domain
HypA	PF01155.14	gi|429217026|ref|YP_007175016.1|	-	0.01	15.5	2.4	0.27	10.9	0.2	2.6	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
AAA_22	PF13401.1	gi|429217026|ref|YP_007175016.1|	-	0.014	15.5	0.0	0.23	11.5	0.0	2.9	2	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|429217026|ref|YP_007175016.1|	-	0.03	13.7	0.0	0.068	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Ribul_P_3_epim	PF00834.14	gi|429217026|ref|YP_007175016.1|	-	0.05	12.6	0.0	6.6	5.7	0.0	2.3	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
zf-C4_Topoisom	PF01396.14	gi|429217026|ref|YP_007175016.1|	-	0.33	10.4	3.1	9.6	5.8	0.0	2.8	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF35_N	PF12172.3	gi|429217026|ref|YP_007175016.1|	-	0.78	9.7	2.5	7.9	6.5	0.2	2.3	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.6	gi|429217026|ref|YP_007175016.1|	-	1.1	8.9	9.3	2.2	7.9	1.5	2.6	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C2HC5	PF06221.8	gi|429217026|ref|YP_007175016.1|	-	2.9	7.7	4.9	4.5	7.1	0.4	2.3	2	0	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
SBP_bac_5	PF00496.17	gi|429217027|ref|YP_007175017.1|	-	5e-46	157.2	5.3	5e-46	157.2	3.7	1.6	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Shisa	PF13908.1	gi|429217027|ref|YP_007175017.1|	-	0.0072	16.5	3.0	0.017	15.3	2.0	1.5	1	0	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
DUF2371	PF10177.4	gi|429217027|ref|YP_007175017.1|	-	0.058	13.2	0.1	0.1	12.4	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
Herpes_UL32	PF06070.6	gi|429217027|ref|YP_007175017.1|	-	3.1	6.1	5.8	5.4	5.3	4.0	1.3	1	0	0	1	1	1	0	Herpesvirus	large	structural	phosphoprotein	UL32
Peptidase_S9	PF00326.16	gi|429217028|ref|YP_007175018.1|	-	2.6e-45	154.2	0.1	4.3e-45	153.5	0.1	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
PD40	PF07676.7	gi|429217028|ref|YP_007175018.1|	-	2.8e-07	30.0	0.1	1.6e-06	27.6	0.1	2.4	1	0	0	1	1	1	1	WD40-like	Beta	Propeller	Repeat
Peptidase_S15	PF02129.13	gi|429217028|ref|YP_007175018.1|	-	1.3e-06	28.0	0.1	1.5e-05	24.6	0.0	2.1	2	0	0	2	2	2	1	X-Pro	dipeptidyl-peptidase	(S15	family)
AXE1	PF05448.7	gi|429217028|ref|YP_007175018.1|	-	5.3e-06	25.1	0.1	0.00045	18.8	0.1	2.3	1	1	0	1	1	1	1	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_5	PF12695.2	gi|429217028|ref|YP_007175018.1|	-	2.1e-05	24.3	0.0	3.3e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
COesterase	PF00135.23	gi|429217028|ref|YP_007175018.1|	-	0.0011	17.7	0.1	0.0022	16.7	0.1	1.3	1	0	0	1	1	1	1	Carboxylesterase	family
DLH	PF01738.13	gi|429217028|ref|YP_007175018.1|	-	0.011	14.9	0.0	0.028	13.7	0.0	1.6	1	1	0	1	1	1	0	Dienelactone	hydrolase	family
BAAT_C	PF08840.6	gi|429217028|ref|YP_007175018.1|	-	0.027	14.1	0.0	0.083	12.5	0.0	1.9	1	1	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_6	PF12697.2	gi|429217028|ref|YP_007175018.1|	-	0.039	13.8	0.0	0.1	12.4	0.0	1.6	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
Complex1_51K	PF01512.12	gi|429217029|ref|YP_007175019.1|	-	2e-47	160.6	0.0	2.8e-47	160.2	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
NADH_4Fe-4S	PF10589.4	gi|429217029|ref|YP_007175019.1|	-	2e-11	42.8	0.0	4.3e-11	41.7	0.0	1.5	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
SLBB	PF10531.4	gi|429217029|ref|YP_007175019.1|	-	1.2e-05	25.1	0.0	3.2e-05	23.7	0.0	1.8	1	0	0	1	1	1	1	SLBB	domain
Molybdopterin	PF00384.17	gi|429217030|ref|YP_007175020.1|	-	6.9e-26	90.9	1.5	1.3e-18	67.0	0.2	2.1	1	1	1	2	2	2	2	Molybdopterin	oxidoreductase
Fer2_4	PF13510.1	gi|429217030|ref|YP_007175020.1|	-	1.7e-14	53.3	0.0	3.7e-14	52.2	0.0	1.6	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_9	PF13187.1	gi|429217030|ref|YP_007175020.1|	-	2.1e-09	37.5	10.3	0.00026	21.2	4.5	3.2	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|429217030|ref|YP_007175020.1|	-	3.4e-08	33.3	9.0	9.8e-08	31.9	2.5	2.7	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|429217030|ref|YP_007175020.1|	-	6.5e-08	32.8	13.9	0.0045	17.3	0.1	3.2	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|429217030|ref|YP_007175020.1|	-	1.8e-07	31.4	8.3	0.0016	18.8	0.2	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer2	PF00111.22	gi|429217030|ref|YP_007175020.1|	-	2.4e-07	30.4	1.5	3.3e-07	29.9	0.0	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.22	gi|429217030|ref|YP_007175020.1|	-	7.6e-07	28.4	25.1	3e-05	23.4	1.9	3.7	3	1	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217030|ref|YP_007175020.1|	-	6.3e-06	25.9	18.1	5.8e-05	22.8	8.5	3.1	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|429217030|ref|YP_007175020.1|	-	1.2e-05	25.0	18.9	4.9e-05	23.1	6.5	2.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217030|ref|YP_007175020.1|	-	3.9e-05	23.3	27.2	0.00087	19.0	2.1	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|429217030|ref|YP_007175020.1|	-	4e-05	24.2	14.2	0.00083	20.0	0.8	3.8	2	1	2	4	4	4	1	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|429217030|ref|YP_007175020.1|	-	0.00018	21.2	23.7	0.0033	17.2	1.3	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|429217030|ref|YP_007175020.1|	-	0.00024	21.4	13.9	0.054	13.8	0.1	4.0	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Molybdop_Fe4S4	PF04879.11	gi|429217030|ref|YP_007175020.1|	-	0.00044	19.9	0.3	0.0012	18.6	0.2	1.8	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer4_4	PF12800.2	gi|429217030|ref|YP_007175020.1|	-	0.0057	16.8	4.8	0.0057	16.8	3.3	3.7	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|429217030|ref|YP_007175020.1|	-	0.033	14.7	3.8	0.033	14.7	2.7	3.6	4	0	0	4	4	3	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|429217030|ref|YP_007175020.1|	-	0.055	14.0	10.8	0.2	12.2	0.6	3.2	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|429217030|ref|YP_007175020.1|	-	1.4	9.3	15.1	1.6	9.1	1.0	3.5	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_19	PF06902.6	gi|429217030|ref|YP_007175020.1|	-	1.9	8.3	7.4	6.1	6.7	5.1	1.9	1	1	0	1	1	1	0	Divergent	4Fe-4S	mono-cluster
Fer4_6	PF12837.2	gi|429217031|ref|YP_007175021.1|	-	1.5e-18	65.7	35.6	2.1e-07	30.4	2.8	4.4	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|429217031|ref|YP_007175021.1|	-	6e-18	64.9	47.7	5.1e-08	33.1	7.6	3.5	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|429217031|ref|YP_007175021.1|	-	4.5e-16	58.5	13.9	4.3e-15	55.4	7.2	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217031|ref|YP_007175021.1|	-	7.3e-15	54.9	50.0	9.5e-07	28.9	8.9	2.8	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|429217031|ref|YP_007175021.1|	-	3.5e-14	51.7	45.2	3.3e-06	26.4	3.2	5.8	4	2	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|429217031|ref|YP_007175021.1|	-	4.9e-13	48.1	31.2	6.3e-05	22.6	0.6	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217031|ref|YP_007175021.1|	-	7.1e-12	44.9	32.1	2e-06	27.4	8.7	3.3	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|429217031|ref|YP_007175021.1|	-	8.4e-10	39.2	23.9	0.0061	17.2	1.4	4.2	3	1	1	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|429217031|ref|YP_007175021.1|	-	5.4e-09	35.7	47.3	3.8e-06	26.6	6.3	3.5	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|429217031|ref|YP_007175021.1|	-	1.3e-07	31.6	42.7	0.0048	17.3	3.7	5.0	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|429217031|ref|YP_007175021.1|	-	2.5e-07	30.4	36.1	0.0022	18.1	3.1	4.4	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|429217031|ref|YP_007175021.1|	-	1.3e-06	28.3	28.3	0.00049	20.0	7.1	3.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429217031|ref|YP_007175021.1|	-	1e-05	25.7	29.1	0.026	14.8	1.0	4.1	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|429217031|ref|YP_007175021.1|	-	0.00062	20.2	33.0	0.011	16.3	2.6	4.9	2	2	3	5	5	5	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|429217031|ref|YP_007175021.1|	-	0.062	13.7	27.2	1.2	9.5	0.4	4.5	4	1	0	4	4	4	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|429217031|ref|YP_007175021.1|	-	0.08	13.3	2.7	0.08	13.3	1.9	4.2	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
AFOR_C	PF01314.13	gi|429217032|ref|YP_007175022.1|	-	4.4e-114	381.1	0.1	5.3e-114	380.8	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|429217032|ref|YP_007175022.1|	-	5.8e-77	257.6	0.0	9.6e-77	256.8	0.0	1.4	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Transp_cyt_pur	PF02133.10	gi|429217033|ref|YP_007175023.1|	-	1.9e-34	119.0	40.9	2.1e-33	115.5	28.3	2.3	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Peptidase_M50	PF02163.17	gi|429217033|ref|YP_007175023.1|	-	0.026	13.4	1.6	1.8	7.4	0.0	3.0	2	2	0	2	2	2	0	Peptidase	family	M50
MFS_1	PF07690.11	gi|429217034|ref|YP_007175024.1|	-	9.8e-18	63.9	38.9	9.9e-10	37.6	12.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF4161	PF13722.1	gi|429217034|ref|YP_007175024.1|	-	0.022	15.0	0.6	0.065	13.5	0.4	1.8	1	0	0	1	1	1	0	C-terminal	domain	on	CstA	(DUF4161)
Amidinotransf	PF02274.12	gi|429217035|ref|YP_007175025.1|	-	3.9e-41	141.0	0.6	5.1e-41	140.5	0.0	1.4	2	0	0	2	2	2	1	Amidinotransferase
PAD_porph	PF04371.10	gi|429217035|ref|YP_007175025.1|	-	0.022	13.7	0.3	0.051	12.6	0.1	1.6	2	0	0	2	2	2	0	Porphyromonas-type	peptidyl-arginine	deiminase
TPP_enzyme_N	PF02776.13	gi|429217036|ref|YP_007175026.1|	-	2.6e-56	189.8	0.0	9.9e-56	187.9	0.0	2.0	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|429217036|ref|YP_007175026.1|	-	4.4e-41	139.9	0.0	8.7e-39	132.5	0.0	2.5	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|429217036|ref|YP_007175026.1|	-	4.7e-26	91.1	0.0	8.7e-26	90.3	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
Fe-ADH	PF00465.14	gi|429217037|ref|YP_007175027.1|	-	1e-83	281.0	0.0	1.2e-83	280.8	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|429217037|ref|YP_007175027.1|	-	5.8e-18	65.1	0.1	3.6e-09	36.3	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|429217037|ref|YP_007175027.1|	-	0.00012	21.0	0.3	0.95	8.3	0.0	3.1	3	0	0	3	3	3	3	3-dehydroquinate	synthase
SCP2	PF02036.12	gi|429217038|ref|YP_007175028.1|	-	8.4e-12	45.2	0.0	1.3e-11	44.7	0.0	1.3	1	1	0	1	1	1	1	SCP-2	sterol	transfer	family
DUF2651	PF10852.3	gi|429217039|ref|YP_007175029.1|	-	0.03	14.6	4.1	0.03	14.6	2.9	3.5	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF2651)
HTH_10	PF04967.7	gi|429217040|ref|YP_007175030.1|	-	2.5e-13	49.3	0.0	5e-13	48.4	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r3	PF04539.11	gi|429217040|ref|YP_007175030.1|	-	0.031	14.1	0.0	0.082	12.7	0.0	1.8	1	1	1	2	2	2	0	Sigma-70	region	3
DUF3783	PF12646.2	gi|429217040|ref|YP_007175030.1|	-	0.034	13.8	0.2	7.1	6.4	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3783)
eRF1_3	PF03465.10	gi|429217040|ref|YP_007175030.1|	-	0.036	14.3	0.1	0.059	13.6	0.1	1.4	1	0	0	1	1	1	0	eRF1	domain	3
COX1	PF00115.15	gi|429217041|ref|YP_007175031.1|	-	4.3e-21	75.0	54.2	4.3e-21	75.0	37.6	2.6	3	1	0	3	3	3	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Consortin_C	PF15281.1	gi|429217042|ref|YP_007175032.1|	-	0.11	11.9	3.1	4.7	6.7	0.3	2.3	2	0	0	2	2	2	0	Consortin	C-terminus
DUF998	PF06197.8	gi|429217043|ref|YP_007175033.1|	-	3.5e-25	88.3	8.9	4.4e-25	88.0	6.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Frag1	PF10277.4	gi|429217043|ref|YP_007175033.1|	-	0.00083	18.8	9.4	0.0071	15.8	6.5	2.1	1	1	0	1	1	1	1	Frag1/DRAM/Sfk1	family
MerC	PF03203.9	gi|429217043|ref|YP_007175033.1|	-	0.31	11.4	8.0	2.2	8.6	0.5	2.5	1	1	1	2	2	2	0	MerC	mercury	resistance	protein
DUF443	PF04276.7	gi|429217043|ref|YP_007175033.1|	-	3.8	6.8	11.5	0.51	9.7	4.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF443)
IncA	PF04156.9	gi|429217044|ref|YP_007175034.1|	-	0.11	12.1	5.8	0.65	9.5	0.1	2.1	2	0	0	2	2	2	0	IncA	protein
m04gp34like	PF12216.3	gi|429217044|ref|YP_007175034.1|	-	0.13	11.6	0.5	0.27	10.5	0.4	1.6	1	0	0	1	1	1	0	Immune	evasion	protein
Herpes_gE	PF02480.11	gi|429217044|ref|YP_007175034.1|	-	0.15	10.3	1.5	0.22	9.7	0.0	1.8	2	0	0	2	2	2	0	Alphaherpesvirus	glycoprotein	E
Endomucin	PF07010.7	gi|429217044|ref|YP_007175034.1|	-	0.29	10.4	1.7	0.31	10.3	0.2	1.6	1	1	0	1	1	1	0	Endomucin
Sigma_reg_N	PF13800.1	gi|429217044|ref|YP_007175034.1|	-	0.85	9.6	7.5	0.17	11.9	1.1	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
EphA2_TM	PF14575.1	gi|429217044|ref|YP_007175034.1|	-	1.1	9.7	3.3	17	5.8	0.2	2.3	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
COPI_assoc	PF08507.5	gi|429217044|ref|YP_007175034.1|	-	1.7	8.3	6.9	2.8	7.5	1.6	2.2	2	0	0	2	2	2	0	COPI	associated	protein
FtsX	PF02687.16	gi|429217044|ref|YP_007175034.1|	-	2.1	8.1	13.1	1.5	8.5	0.7	2.5	1	1	1	2	2	2	0	FtsX-like	permease	family
Fun_ATP-synt_8	PF05933.8	gi|429217044|ref|YP_007175034.1|	-	2.7	8.0	8.3	6.9	6.7	0.2	3.0	2	1	1	3	3	3	0	Fungal	ATP	synthase	protein	8	(A6L)
HAMP	PF00672.20	gi|429217044|ref|YP_007175034.1|	-	3	8.1	5.9	17	5.6	0.2	2.4	2	0	0	2	2	2	0	HAMP	domain
DUF2393	PF09624.5	gi|429217044|ref|YP_007175034.1|	-	9.7	5.7	9.8	0.15	11.5	0.7	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2393)
DUF1628	PF07790.6	gi|429217044|ref|YP_007175034.1|	-	9.8	7.0	6.5	5.3	7.8	0.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1628)
VKOR	PF07884.9	gi|429217045|ref|YP_007175035.1|	-	2.2e-16	59.9	18.3	2.9e-16	59.5	12.7	1.1	1	0	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
4HB_MCP_1	PF12729.2	gi|429217045|ref|YP_007175035.1|	-	2.7	7.3	5.2	0.25	10.6	0.3	1.7	2	0	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
AA_kinase	PF00696.23	gi|429217046|ref|YP_007175036.1|	-	1.9e-29	102.8	0.4	2.5e-29	102.5	0.3	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
DUF1688	PF07958.6	gi|429217046|ref|YP_007175036.1|	-	0.079	11.4	0.0	0.11	10.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1688)
Methyltrans_RNA	PF04452.9	gi|429217046|ref|YP_007175036.1|	-	0.11	11.5	0.0	0.19	10.8	0.0	1.3	1	0	0	1	1	1	0	RNA	methyltransferase
Memo	PF01875.12	gi|429217048|ref|YP_007175038.1|	-	5.6e-84	281.2	0.1	6.3e-84	281.1	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
Thioredox_DsbH	PF03190.10	gi|429217049|ref|YP_007175039.1|	-	2.4e-63	212.6	0.1	4.9e-63	211.6	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|429217049|ref|YP_007175039.1|	-	6.4e-16	58.1	0.0	1.4e-15	57.0	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|429217049|ref|YP_007175039.1|	-	5.1e-07	29.8	0.0	1.2e-06	28.6	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|429217049|ref|YP_007175039.1|	-	6.9e-06	25.6	0.1	1.5e-05	24.5	0.1	1.5	1	0	0	1	1	1	1	Thioredoxin
Aldo_ket_red	PF00248.16	gi|429217050|ref|YP_007175040.1|	-	2.5e-39	134.7	0.2	5.1e-39	133.8	0.1	1.5	1	1	0	1	1	1	1	Aldo/keto	reductase	family
MFS_1	PF07690.11	gi|429217051|ref|YP_007175041.1|	-	3.8e-21	75.1	53.1	4.8e-16	58.4	22.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1414	PF07208.6	gi|429217051|ref|YP_007175041.1|	-	0.34	10.6	4.6	0.12	12.0	0.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1414)
DUF2371	PF10177.4	gi|429217051|ref|YP_007175041.1|	-	2.1	8.2	8.3	0.58	10.0	0.6	2.7	3	0	0	3	3	3	0	Uncharacterised	conserved	protein	(DUF2371)
Fer4_13	PF13370.1	gi|429217052|ref|YP_007175042.1|	-	5.1e-17	62.0	4.0	1.1e-16	60.9	2.7	1.5	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|429217052|ref|YP_007175042.1|	-	1e-16	61.2	1.8	1.3e-16	60.8	1.2	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_9	PF13187.1	gi|429217052|ref|YP_007175042.1|	-	0.0018	18.4	1.6	0.0037	17.4	1.1	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|429217052|ref|YP_007175042.1|	-	0.033	13.9	2.3	0.11	12.3	1.6	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217052|ref|YP_007175042.1|	-	0.084	12.7	3.2	1.2	9.0	0.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|429217052|ref|YP_007175042.1|	-	0.13	12.6	4.3	0.14	12.5	0.1	2.3	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|429217052|ref|YP_007175042.1|	-	0.14	11.8	1.1	0.14	11.8	0.8	2.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|429217052|ref|YP_007175042.1|	-	0.18	12.2	3.2	4.1	7.8	2.8	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
MFS_1	PF07690.11	gi|429217053|ref|YP_007175043.1|	-	8.3e-54	182.6	49.2	8.3e-54	182.6	34.1	1.6	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429217053|ref|YP_007175043.1|	-	1.5e-10	40.2	34.4	4.6e-09	35.3	9.3	2.6	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
Hemerythrin	PF01814.18	gi|429217054|ref|YP_007175044.1|	-	1.5e-10	41.3	0.0	2.2e-10	40.7	0.0	1.3	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
DUF1886	PF09171.5	gi|429217054|ref|YP_007175044.1|	-	0.027	13.5	2.6	0.078	11.9	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1886)
RFC1	PF08519.7	gi|429217054|ref|YP_007175044.1|	-	0.039	13.7	3.8	0.13	11.9	0.1	2.5	2	1	0	2	2	2	0	Replication	factor	RFC1	C	terminal	domain
LRS4	PF10422.4	gi|429217054|ref|YP_007175044.1|	-	0.23	10.8	2.4	0.31	10.3	1.7	1.3	1	1	0	1	1	1	0	Monopolin	complex	subunit	LRS4
DSPc	PF00782.15	gi|429217054|ref|YP_007175044.1|	-	2.1	7.9	5.7	1.7	8.2	0.2	2.4	2	1	0	2	2	2	0	Dual	specificity	phosphatase,	catalytic	domain
HHH_4	PF14490.1	gi|429217055|ref|YP_007175045.1|	-	0.0024	17.5	0.7	0.063	13.0	0.2	2.4	2	1	0	2	2	2	1	Helix-hairpin-helix	containing	domain
Borrelia_REV	PF03978.8	gi|429217055|ref|YP_007175045.1|	-	0.047	13.4	4.9	2.4	7.8	0.6	2.1	2	0	0	2	2	2	0	Borrelia	burgdorferi	REV	protein
DUF3227	PF11537.3	gi|429217055|ref|YP_007175045.1|	-	0.075	13.1	0.1	0.18	11.9	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3227)
AIRS_C	PF02769.17	gi|429217056|ref|YP_007175046.1|	-	5.5e-20	71.9	0.1	7.8e-20	71.4	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|429217056|ref|YP_007175046.1|	-	6.6e-05	23.0	0.0	0.00027	21.1	0.0	2.0	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
Phos_pyr_kin	PF08543.7	gi|429217057|ref|YP_007175047.1|	-	2.4e-93	311.8	0.3	3.1e-93	311.5	0.2	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|429217057|ref|YP_007175047.1|	-	8.4e-54	181.4	0.1	1.4e-53	180.7	0.0	1.4	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|429217057|ref|YP_007175047.1|	-	5.4e-09	35.6	0.0	8.7e-09	34.9	0.0	1.3	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Ribosomal_L2_C	PF03947.13	gi|429217058|ref|YP_007175048.1|	-	1.7e-40	137.8	0.1	3.8e-40	136.6	0.1	1.5	1	1	1	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|429217058|ref|YP_007175048.1|	-	3.1e-08	33.4	1.2	4.9e-08	32.8	0.0	2.0	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
AAA_10	PF12846.2	gi|429217059|ref|YP_007175049.1|	-	6.7e-16	58.5	0.1	2e-08	34.0	0.0	2.5	2	1	1	3	3	3	2	AAA-like	domain
DUF87	PF01935.12	gi|429217059|ref|YP_007175049.1|	-	5.2e-09	36.2	0.2	5e-08	33.0	0.0	2.5	2	1	1	3	3	3	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|429217059|ref|YP_007175049.1|	-	0.00016	20.2	0.0	0.052	11.9	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|429217059|ref|YP_007175049.1|	-	0.00068	18.3	0.0	0.0023	16.6	0.0	1.8	3	0	0	3	3	3	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|429217059|ref|YP_007175049.1|	-	0.0013	18.2	0.0	0.028	13.9	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
T4SS-DNA_transf	PF02534.9	gi|429217059|ref|YP_007175049.1|	-	0.0014	17.3	0.0	0.0022	16.6	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_22	PF13401.1	gi|429217059|ref|YP_007175049.1|	-	0.0018	18.4	0.0	0.0095	16.0	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|429217059|ref|YP_007175049.1|	-	0.0023	17.7	0.0	0.0042	16.9	0.0	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_23	PF13476.1	gi|429217059|ref|YP_007175049.1|	-	0.011	16.0	3.6	0.12	12.7	0.1	2.6	2	1	0	2	2	2	0	AAA	domain
TraG-D_C	PF12696.2	gi|429217059|ref|YP_007175049.1|	-	0.073	12.9	0.0	0.15	11.8	0.0	1.5	1	0	0	1	1	1	0	TraM	recognition	site	of	TraD	and	TraG
AAA	PF00004.24	gi|429217059|ref|YP_007175049.1|	-	0.076	13.2	0.1	5.9	7.0	0.0	3.1	3	0	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|429217059|ref|YP_007175049.1|	-	0.08	11.9	0.0	0.19	10.7	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
ABC_tran	PF00005.22	gi|429217059|ref|YP_007175049.1|	-	0.1	12.9	0.2	0.51	10.6	0.0	2.2	2	0	0	2	2	2	0	ABC	transporter
AAA_19	PF13245.1	gi|429217059|ref|YP_007175049.1|	-	0.18	11.6	0.0	0.35	10.6	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF340	PF03956.8	gi|429217061|ref|YP_007175051.1|	-	0.004	16.4	0.8	0.0042	16.3	0.5	1.1	1	0	0	1	1	1	1	Membrane	protein	of	unknown	function	(DUF340)
Papilloma_E5	PF03025.9	gi|429217061|ref|YP_007175051.1|	-	6.2	6.8	6.8	1.9	8.5	1.3	2.0	2	0	0	2	2	2	0	Papillomavirus	E5
Polysacc_deac_1	PF01522.16	gi|429217062|ref|YP_007175052.1|	-	3e-17	62.4	0.0	4.6e-17	61.8	0.0	1.2	1	0	0	1	1	1	1	Polysaccharide	deacetylase
Glyco_hydro_57	PF03065.10	gi|429217062|ref|YP_007175052.1|	-	4.5e-05	22.5	0.0	0.0025	16.7	0.0	2.4	1	1	0	2	2	2	2	Glycosyl	hydrolase	family	57
Spermine_synth	PF01564.12	gi|429217063|ref|YP_007175053.1|	-	3.3e-62	209.6	1.0	4.7e-62	209.1	0.7	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_31	PF13847.1	gi|429217063|ref|YP_007175053.1|	-	1.1e-08	34.7	0.1	1.6e-08	34.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429217063|ref|YP_007175053.1|	-	1.7e-07	31.8	0.0	2.6e-07	31.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|429217063|ref|YP_007175053.1|	-	1.5e-06	28.5	0.0	2.8e-06	27.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|429217063|ref|YP_007175053.1|	-	3.3e-06	27.1	0.0	5.4e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_30	PF05430.6	gi|429217063|ref|YP_007175053.1|	-	9.8e-06	25.2	0.0	1.7e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
DUF43	PF01861.11	gi|429217063|ref|YP_007175053.1|	-	2.5e-05	23.4	0.0	4.5e-05	22.5	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF43
Cons_hypoth95	PF03602.10	gi|429217063|ref|YP_007175053.1|	-	0.00035	20.0	0.1	0.00072	18.9	0.0	1.6	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
MTS	PF05175.9	gi|429217063|ref|YP_007175053.1|	-	0.00077	18.8	0.0	0.0012	18.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|429217063|ref|YP_007175053.1|	-	0.0013	19.1	0.0	0.0028	18.1	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|429217063|ref|YP_007175053.1|	-	0.0016	18.8	0.3	0.0041	17.5	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
NSP13	PF06460.7	gi|429217063|ref|YP_007175053.1|	-	0.0032	16.3	1.6	0.005	15.7	1.1	1.2	1	0	0	1	1	1	1	Coronavirus	NSP13
NAD_binding_7	PF13241.1	gi|429217063|ref|YP_007175053.1|	-	0.02	15.1	0.2	0.041	14.1	0.1	1.7	1	1	0	1	1	1	0	Putative	NAD(P)-binding
Methyltransf_3	PF01596.12	gi|429217063|ref|YP_007175053.1|	-	0.041	12.9	0.0	0.067	12.2	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
Phage_Orf51	PF06194.6	gi|429217063|ref|YP_007175053.1|	-	0.081	13.0	1.7	2.5	8.2	0.1	3.3	3	0	0	3	3	3	0	Phage	Conserved	Open	Reading	Frame	51
Methyltransf_5	PF01795.14	gi|429217063|ref|YP_007175053.1|	-	0.12	11.6	0.0	0.18	11.0	0.0	1.2	1	0	0	1	1	1	0	MraW	methylase	family
TRM	PF02005.11	gi|429217063|ref|YP_007175053.1|	-	0.13	11.1	0.1	0.13	11.1	0.1	1.7	2	0	0	2	2	2	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Ribosomal_S8e	PF01201.17	gi|429217064|ref|YP_007175054.1|	-	4.6e-28	97.9	4.2	5.1e-28	97.8	2.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
DUF1886	PF09171.5	gi|429217065|ref|YP_007175055.1|	-	2.9e-64	216.4	3.6	3.5e-64	216.1	2.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1886)
DUF2357	PF09823.4	gi|429217065|ref|YP_007175055.1|	-	0.084	11.9	0.2	0.16	11.0	0.1	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2357)
AIRS	PF00586.19	gi|429217066|ref|YP_007175056.1|	-	0.00049	20.2	0.0	0.00083	19.5	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Prenyltransf	PF01255.14	gi|429217067|ref|YP_007175057.1|	-	1.3e-55	187.9	2.6	6.1e-53	179.2	1.8	2.0	1	1	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Glyco_trans_1_3	PF13528.1	gi|429217068|ref|YP_007175058.1|	-	3.4e-09	36.3	0.0	9.2e-09	34.9	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.11	gi|429217068|ref|YP_007175058.1|	-	0.00075	19.1	0.4	0.0016	18.1	0.1	1.7	2	0	0	2	2	2	1	Glycosyltransferase	family	28	C-terminal	domain
DUF2584	PF10763.4	gi|429217068|ref|YP_007175058.1|	-	0.023	14.5	0.1	0.054	13.3	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2584)
MGS	PF02142.17	gi|429217068|ref|YP_007175058.1|	-	0.082	12.8	0.1	0.45	10.4	0.0	2.2	2	1	0	2	2	2	0	MGS-like	domain
Fumerase	PF05681.9	gi|429217069|ref|YP_007175059.1|	-	1.8e-84	283.0	0.0	2e-84	282.8	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
Fumerase_C	PF05683.7	gi|429217070|ref|YP_007175060.1|	-	2.8e-56	189.8	0.3	3.2e-56	189.7	0.2	1.0	1	0	0	1	1	1	1	Fumarase	C-terminus
Nitro_FeMo-Co	PF02579.12	gi|429217070|ref|YP_007175060.1|	-	0.023	14.7	0.2	0.053	13.5	0.0	1.6	2	0	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
KdpA	PF03814.10	gi|429217071|ref|YP_007175061.1|	-	4.5e-141	470.5	46.3	6.8e-140	466.7	32.1	1.9	1	1	0	1	1	1	1	Potassium-transporting	ATPase	A	subunit
DUF3366	PF11846.3	gi|429217071|ref|YP_007175061.1|	-	0.38	10.5	6.4	0.25	11.1	0.7	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3366)
E1-E2_ATPase	PF00122.15	gi|429217072|ref|YP_007175062.1|	-	3.4e-40	137.4	0.2	3.4e-40	137.4	0.2	2.6	2	1	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|429217072|ref|YP_007175062.1|	-	2.2e-25	90.3	4.9	6.1e-25	88.8	3.4	1.7	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|429217072|ref|YP_007175062.1|	-	1.9e-11	44.4	0.0	4.9e-11	43.1	0.0	1.7	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|429217072|ref|YP_007175062.1|	-	1.8e-06	27.6	2.1	1.8e-06	27.6	1.5	3.3	3	1	0	4	4	4	1	haloacid	dehalogenase-like	hydrolase
Plasmod_dom_1	PF09715.5	gi|429217072|ref|YP_007175062.1|	-	0.036	13.9	0.1	0.036	13.9	0.1	3.3	4	0	0	4	4	4	0	Plasmodium	protein	of	unknown	function	(Plasmod_dom_1)
KdpC	PF02669.10	gi|429217073|ref|YP_007175063.1|	-	7.8e-16	58.3	4.1	1.3e-07	31.5	1.0	2.0	1	1	1	2	2	2	2	K+-transporting	ATPase,	c	chain
UPF0051	PF01458.12	gi|429217074|ref|YP_007175064.1|	-	1.5e-31	109.6	0.1	2.3e-31	109.0	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|429217075|ref|YP_007175065.1|	-	1.3e-56	191.6	0.1	1.6e-56	191.3	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|429217076|ref|YP_007175066.1|	-	1.2e-19	70.9	0.0	1.7e-19	70.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217076|ref|YP_007175066.1|	-	1.7e-11	44.6	2.9	8.5e-09	35.7	2.0	2.2	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|429217076|ref|YP_007175066.1|	-	2.6e-06	26.8	0.0	0.00067	18.9	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_13	PF13166.1	gi|429217076|ref|YP_007175066.1|	-	6.7e-05	21.5	0.2	0.2	10.0	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|429217076|ref|YP_007175066.1|	-	0.00095	18.6	0.0	0.011	15.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|429217076|ref|YP_007175066.1|	-	0.0019	17.6	0.0	0.0036	16.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.12	gi|429217076|ref|YP_007175066.1|	-	0.0032	16.9	0.0	0.0049	16.3	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|429217076|ref|YP_007175066.1|	-	0.0032	17.3	0.2	0.03	14.2	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|429217076|ref|YP_007175066.1|	-	0.0062	15.7	0.1	0.012	14.8	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|429217076|ref|YP_007175066.1|	-	0.0072	16.6	0.9	0.13	12.5	0.6	2.4	1	1	0	1	1	1	1	AAA	domain
MutS_V	PF00488.16	gi|429217076|ref|YP_007175066.1|	-	0.011	15.1	0.1	0.19	11.0	0.1	2.0	2	0	0	2	2	2	0	MutS	domain	V
AAA	PF00004.24	gi|429217076|ref|YP_007175066.1|	-	0.011	15.8	0.1	0.15	12.2	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Pox_A32	PF04665.7	gi|429217076|ref|YP_007175066.1|	-	0.014	14.7	0.2	2.4	7.3	0.0	2.3	2	0	0	2	2	2	0	Poxvirus	A32	protein
AAA_33	PF13671.1	gi|429217076|ref|YP_007175066.1|	-	0.014	15.2	0.0	0.023	14.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|429217076|ref|YP_007175066.1|	-	0.015	14.2	0.1	0.024	13.5	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|429217076|ref|YP_007175066.1|	-	0.015	15.4	0.0	0.11	12.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|429217076|ref|YP_007175066.1|	-	0.049	12.7	0.0	0.072	12.2	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|429217076|ref|YP_007175066.1|	-	0.065	12.8	0.1	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|429217076|ref|YP_007175066.1|	-	0.066	13.5	0.3	0.13	12.5	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|429217076|ref|YP_007175066.1|	-	0.074	12.5	0.0	0.14	11.6	0.0	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|429217076|ref|YP_007175066.1|	-	0.074	12.7	0.5	1.2	8.8	0.0	2.7	2	1	1	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|429217076|ref|YP_007175066.1|	-	0.089	12.7	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|429217076|ref|YP_007175066.1|	-	0.098	12.3	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_17	PF13207.1	gi|429217076|ref|YP_007175066.1|	-	0.11	13.3	0.2	0.19	12.5	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|429217076|ref|YP_007175066.1|	-	0.11	11.9	0.0	0.22	10.9	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|429217076|ref|YP_007175066.1|	-	0.12	12.0	0.0	0.23	11.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Zeta_toxin	PF06414.7	gi|429217076|ref|YP_007175066.1|	-	0.14	11.2	0.0	0.21	10.6	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
FtsK_SpoIIIE	PF01580.13	gi|429217076|ref|YP_007175066.1|	-	0.16	11.4	0.0	0.27	10.6	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
HEPN	PF05168.9	gi|429217077|ref|YP_007175067.1|	-	0.00032	20.5	0.2	0.00042	20.1	0.1	1.2	1	0	0	1	1	1	1	HEPN	domain
Lyase_1	PF00206.15	gi|429217078|ref|YP_007175068.1|	-	5e-81	272.2	0.0	6.8e-81	271.8	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|429217078|ref|YP_007175068.1|	-	1.8e-06	27.8	0.1	0.00018	21.5	0.0	2.6	2	0	0	2	2	2	1	Fumarase	C	C-terminus
chaperone_DMP	PF10448.4	gi|429217078|ref|YP_007175068.1|	-	0.024	14.5	0.1	0.053	13.4	0.1	1.6	1	0	0	1	1	1	0	20S	proteasome	chaperone
Phage_terminase	PF10668.4	gi|429217078|ref|YP_007175068.1|	-	0.037	13.7	0.2	0.25	11.1	0.1	2.4	2	0	0	2	2	2	0	Phage	terminase	small	subunit
HTH_19	PF12844.2	gi|429217078|ref|YP_007175068.1|	-	0.055	13.5	0.8	0.31	11.1	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
Rotamase_3	PF13616.1	gi|429217078|ref|YP_007175068.1|	-	0.08	13.2	0.0	0.2	11.9	0.0	1.6	1	0	0	1	1	1	0	PPIC-type	PPIASE	domain
Radical_SAM	PF04055.16	gi|429217079|ref|YP_007175069.1|	-	1e-12	48.5	0.0	1.8e-12	47.7	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Aldolase_II	PF00596.16	gi|429217080|ref|YP_007175070.1|	-	6.9e-35	120.3	0.0	7.6e-35	120.1	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
DUF2999	PF11212.3	gi|429217081|ref|YP_007175071.1|	-	0.00023	21.1	1.3	0.00058	19.8	0.2	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2999)
tRNA_lig_kinase	PF08303.6	gi|429217081|ref|YP_007175071.1|	-	0.076	12.8	3.4	0.068	13.0	1.6	1.5	1	1	1	2	2	2	0	tRNA	ligase	kinase	domain
HrpJ	PF07201.6	gi|429217081|ref|YP_007175071.1|	-	0.1	12.6	1.8	0.15	12.1	1.3	1.2	1	0	0	1	1	1	0	HrpJ-like	domain
MSA-2c	PF12238.3	gi|429217081|ref|YP_007175071.1|	-	0.88	9.2	6.7	1.4	8.5	4.6	1.4	1	1	0	1	1	1	0	Merozoite	surface	antigen	2c
DUF1827	PF08860.5	gi|429217081|ref|YP_007175071.1|	-	1.4	9.0	9.5	2.7	8.1	0.4	2.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1827)
Hjc	PF01870.13	gi|429217082|ref|YP_007175072.1|	-	6.1e-27	93.0	0.0	1e-26	92.3	0.0	1.4	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
NERD	PF08378.6	gi|429217082|ref|YP_007175072.1|	-	0.00037	20.7	0.0	0.00051	20.2	0.0	1.4	1	1	0	1	1	1	1	Nuclease-related	domain
DUF1626	PF07788.6	gi|429217082|ref|YP_007175072.1|	-	0.044	13.5	0.1	0.089	12.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1626)
DUF3883	PF13020.1	gi|429217082|ref|YP_007175072.1|	-	0.069	12.8	0.0	1.9	8.2	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3883)
Vsr	PF03852.10	gi|429217082|ref|YP_007175072.1|	-	0.13	11.8	0.0	0.3	10.7	0.0	1.6	1	0	0	1	1	1	0	DNA	mismatch	endonuclease	Vsr
Citrate_synt	PF00285.16	gi|429217083|ref|YP_007175073.1|	-	2.7e-116	388.2	0.0	3e-116	388.0	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
Linker_histone	PF00538.14	gi|429217083|ref|YP_007175073.1|	-	0.089	12.9	0.1	0.2	11.7	0.0	1.5	1	0	0	1	1	1	0	linker	histone	H1	and	H5	family
ABC2_membrane	PF01061.19	gi|429217084|ref|YP_007175074.1|	-	3.4e-26	91.7	28.4	3.4e-26	91.7	19.7	2.2	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|429217084|ref|YP_007175074.1|	-	8.8e-21	74.2	33.2	8.8e-21	74.2	23.0	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|429217084|ref|YP_007175074.1|	-	3.2e-11	42.8	35.6	3.8e-11	42.6	24.7	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|429217084|ref|YP_007175074.1|	-	1.5e-07	30.5	22.1	2.1e-07	30.0	15.3	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|429217085|ref|YP_007175075.1|	-	5.7e-26	91.4	0.0	1.3e-25	90.2	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|429217085|ref|YP_007175075.1|	-	7.9e-15	55.5	0.2	2e-11	44.3	0.0	2.9	2	1	0	2	2	2	1	AAA	domain
DUF4162	PF13732.1	gi|429217085|ref|YP_007175075.1|	-	3.7e-05	24.1	0.6	0.00011	22.6	0.4	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_29	PF13555.1	gi|429217085|ref|YP_007175075.1|	-	0.0028	17.1	0.1	0.0053	16.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
KdpD	PF02702.12	gi|429217085|ref|YP_007175075.1|	-	0.0071	15.5	0.0	0.016	14.3	0.0	1.5	1	1	0	1	1	1	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
AAA_23	PF13476.1	gi|429217085|ref|YP_007175075.1|	-	0.01	16.1	0.8	0.01	16.1	0.5	1.9	2	0	0	2	2	2	0	AAA	domain
SMC_N	PF02463.14	gi|429217085|ref|YP_007175075.1|	-	0.014	14.6	0.1	2.8	7.1	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
SRP54	PF00448.17	gi|429217085|ref|YP_007175075.1|	-	0.015	14.7	0.1	0.03	13.7	0.1	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
UPF0079	PF02367.12	gi|429217085|ref|YP_007175075.1|	-	0.068	12.7	0.1	0.56	9.8	0.0	2.1	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
SbcCD_C	PF13558.1	gi|429217085|ref|YP_007175075.1|	-	0.11	12.4	0.0	0.19	11.6	0.0	1.5	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|429217085|ref|YP_007175075.1|	-	0.12	11.5	0.0	0.25	10.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
PfkB	PF00294.19	gi|429217086|ref|YP_007175076.1|	-	4.8e-32	111.2	0.0	5.9e-32	110.9	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Amidohydro_5	PF13594.1	gi|429217087|ref|YP_007175077.1|	-	0.033	14.0	0.9	0.19	11.5	0.4	2.4	2	1	0	2	2	2	0	Amidohydrolase
T2SE	PF00437.15	gi|429217088|ref|YP_007175078.1|	-	6.5e-15	54.7	0.0	1e-14	54.1	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|429217088|ref|YP_007175078.1|	-	6e-07	30.2	0.1	3.7e-05	24.5	0.0	3.2	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|429217088|ref|YP_007175078.1|	-	7.8e-06	25.8	0.2	0.0049	16.7	0.0	3.4	2	1	1	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|429217088|ref|YP_007175078.1|	-	6e-05	23.3	0.4	0.00043	20.5	0.0	2.7	3	0	0	3	3	2	1	AAA	domain
AAA_25	PF13481.1	gi|429217088|ref|YP_007175078.1|	-	0.00032	20.1	0.0	0.00096	18.6	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|429217088|ref|YP_007175078.1|	-	0.00075	19.1	0.0	0.0016	18.0	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
KaiC	PF06745.8	gi|429217088|ref|YP_007175078.1|	-	0.0016	17.6	1.1	0.045	12.8	0.0	3.0	2	1	1	3	3	3	1	KaiC
Zeta_toxin	PF06414.7	gi|429217088|ref|YP_007175078.1|	-	0.0018	17.4	0.0	0.0036	16.4	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_22	PF13401.1	gi|429217088|ref|YP_007175078.1|	-	0.002	18.2	0.0	0.0094	16.0	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
ArgK	PF03308.11	gi|429217088|ref|YP_007175078.1|	-	0.0024	16.7	0.0	0.0062	15.3	0.0	1.6	1	0	0	1	1	1	1	ArgK	protein
AAA_19	PF13245.1	gi|429217088|ref|YP_007175078.1|	-	0.0024	17.6	0.0	0.0055	16.4	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|429217088|ref|YP_007175078.1|	-	0.0029	17.0	0.0	0.0096	15.3	0.0	1.8	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
ABC_tran	PF00005.22	gi|429217088|ref|YP_007175078.1|	-	0.0042	17.3	0.0	0.01	16.1	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
AAA_28	PF13521.1	gi|429217088|ref|YP_007175078.1|	-	0.006	16.5	0.1	0.017	15.0	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|429217088|ref|YP_007175078.1|	-	0.0062	16.1	0.0	0.011	15.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|429217088|ref|YP_007175078.1|	-	0.0062	16.5	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
Thymidylate_kin	PF02223.12	gi|429217088|ref|YP_007175078.1|	-	0.0065	15.8	0.2	0.089	12.1	0.0	2.4	1	1	1	2	2	2	1	Thymidylate	kinase
AAA	PF00004.24	gi|429217088|ref|YP_007175078.1|	-	0.0069	16.5	0.0	0.024	14.8	0.0	2.0	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|429217088|ref|YP_007175078.1|	-	0.015	15.2	0.0	0.028	14.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|429217088|ref|YP_007175078.1|	-	0.016	14.7	0.1	0.03	13.8	0.1	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
NTPase_1	PF03266.10	gi|429217088|ref|YP_007175078.1|	-	0.017	14.8	0.0	0.047	13.4	0.0	1.8	1	0	0	1	1	1	0	NTPase
RuvB_N	PF05496.7	gi|429217088|ref|YP_007175078.1|	-	0.021	13.8	0.1	0.097	11.7	0.0	2.0	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
KTI12	PF08433.5	gi|429217088|ref|YP_007175078.1|	-	0.023	13.9	0.0	0.053	12.7	0.0	1.6	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Sigma54_activ_2	PF14532.1	gi|429217088|ref|YP_007175078.1|	-	0.032	14.2	0.0	0.081	12.9	0.0	1.7	1	0	0	1	1	1	0	Sigma-54	interaction	domain
APS_kinase	PF01583.15	gi|429217088|ref|YP_007175078.1|	-	0.035	13.7	0.1	0.93	9.1	0.0	2.4	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Miro	PF08477.8	gi|429217088|ref|YP_007175078.1|	-	0.038	14.4	0.0	0.83	10.1	0.0	2.5	2	0	0	2	2	2	0	Miro-like	protein
AAA_5	PF07728.9	gi|429217088|ref|YP_007175078.1|	-	0.043	13.5	0.0	0.11	12.1	0.0	1.8	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.7	gi|429217088|ref|YP_007175078.1|	-	0.08	12.5	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_10	PF12846.2	gi|429217088|ref|YP_007175078.1|	-	0.086	12.2	0.0	0.21	10.9	0.0	1.7	1	0	0	1	1	1	0	AAA-like	domain
Sigma54_activat	PF00158.21	gi|429217088|ref|YP_007175078.1|	-	0.09	12.2	0.0	0.19	11.1	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_29	PF13555.1	gi|429217088|ref|YP_007175078.1|	-	0.11	12.1	0.3	0.31	10.5	0.0	1.9	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|429217088|ref|YP_007175078.1|	-	0.11	11.9	0.0	0.24	10.8	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
RNA_helicase	PF00910.17	gi|429217088|ref|YP_007175078.1|	-	0.11	12.6	0.0	0.24	11.6	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Viral_helicase1	PF01443.13	gi|429217088|ref|YP_007175078.1|	-	0.12	11.8	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_3	PF07726.6	gi|429217088|ref|YP_007175078.1|	-	0.13	11.9	0.0	0.34	10.4	0.0	1.8	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|429217088|ref|YP_007175078.1|	-	0.81	9.9	7.4	0.85	9.9	0.1	3.0	3	0	0	3	3	3	0	AAA	domain
Na_H_Exchanger	PF00999.16	gi|429217089|ref|YP_007175079.1|	-	2.4e-41	141.5	36.9	3e-41	141.2	25.6	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.23	gi|429217089|ref|YP_007175079.1|	-	1.3e-11	44.0	0.5	7e-06	25.7	0.0	2.7	2	0	0	2	2	2	2	CBS	domain
ThiF	PF00899.16	gi|429217090|ref|YP_007175080.1|	-	4.3e-39	133.4	0.2	9.5e-39	132.3	0.2	1.6	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|429217090|ref|YP_007175080.1|	-	2.1e-15	56.0	0.0	4.3e-15	55.0	0.0	1.6	1	0	0	1	1	1	1	MoeZ/MoeB	domain
ApbA	PF02558.11	gi|429217090|ref|YP_007175080.1|	-	0.002	17.5	0.1	0.012	15.0	0.0	2.0	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_7	PF13241.1	gi|429217090|ref|YP_007175080.1|	-	0.03	14.5	0.0	0.061	13.5	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|429217090|ref|YP_007175080.1|	-	0.034	13.7	0.0	0.073	12.7	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
OCD_Mu_crystall	PF02423.10	gi|429217090|ref|YP_007175080.1|	-	0.094	11.4	0.0	0.16	10.7	0.0	1.3	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
UDPG_MGDP_dh_N	PF03721.9	gi|429217090|ref|YP_007175080.1|	-	0.097	12.0	0.2	0.22	10.8	0.1	1.7	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429217090|ref|YP_007175080.1|	-	0.1	12.3	0.0	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Shikimate_DH	PF01488.15	gi|429217090|ref|YP_007175080.1|	-	0.13	12.3	1.7	0.47	10.5	0.1	2.4	2	1	1	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
IlvN	PF07991.7	gi|429217090|ref|YP_007175080.1|	-	0.14	11.5	0.1	0.24	10.7	0.0	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
FAD_binding_3	PF01494.14	gi|429217090|ref|YP_007175080.1|	-	0.19	10.7	0.0	0.24	10.3	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Sugar_tr	PF00083.19	gi|429217091|ref|YP_007175081.1|	-	3e-22	78.8	38.1	3.2e-16	58.9	9.7	2.2	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|429217091|ref|YP_007175081.1|	-	3.8e-19	68.6	52.2	1.2e-16	60.3	16.0	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TLV_coat	PF00429.14	gi|429217091|ref|YP_007175081.1|	-	0.4	9.0	1.0	0.63	8.4	0.7	1.2	1	0	0	1	1	1	0	ENV	polyprotein	(coat	polyprotein)
Aminotran_5	PF00266.14	gi|429217092|ref|YP_007175082.1|	-	7.8e-30	103.8	0.0	9.8e-30	103.5	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
DsrH	PF04077.7	gi|429217092|ref|YP_007175082.1|	-	0.072	12.7	0.2	3.8	7.2	0.0	2.6	2	1	0	2	2	2	0	DsrH	like	protein
PALP	PF00291.20	gi|429217093|ref|YP_007175083.1|	-	5.8e-51	173.5	0.0	7e-51	173.2	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
zf-ribbon_3	PF13248.1	gi|429217093|ref|YP_007175083.1|	-	0.077	12.2	3.9	0.13	11.5	2.7	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.2	gi|429217093|ref|YP_007175083.1|	-	0.1	12.3	0.4	0.2	11.5	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
HypA	PF01155.14	gi|429217093|ref|YP_007175083.1|	-	0.11	12.2	0.2	0.2	11.3	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Bac_surface_Ag	PF01103.18	gi|429217093|ref|YP_007175083.1|	-	0.11	11.8	0.1	0.15	11.5	0.1	1.1	1	0	0	1	1	1	0	Surface	antigen
RNA_POL_M_15KD	PF02150.11	gi|429217093|ref|YP_007175083.1|	-	0.85	9.3	4.4	2.3	7.9	0.1	2.5	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
YHS	PF04945.8	gi|429217094|ref|YP_007175084.1|	-	3e-19	68.5	1.2	4.3e-19	68.0	0.8	1.2	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.9	gi|429217094|ref|YP_007175084.1|	-	1e-05	25.0	2.6	1.8e-05	24.2	1.8	1.5	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|429217094|ref|YP_007175084.1|	-	0.00022	21.3	2.1	0.00034	20.7	1.4	1.3	1	0	0	1	1	1	1	Archaeal	TRASH	domain
E1-E2_ATPase	PF00122.15	gi|429217095|ref|YP_007175085.1|	-	1.2e-52	178.1	4.9	1.2e-52	178.1	3.4	1.8	2	0	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|429217095|ref|YP_007175085.1|	-	7.6e-30	104.9	0.0	1.5e-29	103.9	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|429217095|ref|YP_007175085.1|	-	5e-16	58.5	1.9	4.8e-13	49.0	0.6	3.2	2	0	0	2	2	2	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|429217095|ref|YP_007175085.1|	-	6e-11	42.8	0.0	1.8e-10	41.3	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|429217095|ref|YP_007175085.1|	-	3.4e-05	23.5	4.5	0.0053	16.3	0.1	3.5	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
T2SE	PF00437.15	gi|429217096|ref|YP_007175086.1|	-	1.6e-28	99.4	0.1	1.3e-27	96.3	0.0	2.0	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|429217096|ref|YP_007175086.1|	-	0.0012	19.1	0.1	0.011	16.0	0.0	2.3	1	1	0	2	2	2	1	ABC	transporter
AAA_22	PF13401.1	gi|429217096|ref|YP_007175086.1|	-	0.0028	17.8	0.0	0.005	16.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429217096|ref|YP_007175086.1|	-	0.0045	16.4	0.0	0.0084	15.6	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|429217096|ref|YP_007175086.1|	-	0.011	16.0	1.3	1.1	9.5	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|429217096|ref|YP_007175086.1|	-	0.028	15.2	0.0	0.054	14.3	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|429217096|ref|YP_007175086.1|	-	0.086	13.3	0.0	0.18	12.3	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
FtsK_SpoIIIE	PF01580.13	gi|429217096|ref|YP_007175086.1|	-	0.098	12.1	0.1	0.17	11.3	0.1	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_23	PF13476.1	gi|429217096|ref|YP_007175086.1|	-	0.74	10.0	13.0	1e+02	3.1	9.0	2.8	1	1	0	1	1	1	0	AAA	domain
T2SF	PF00482.18	gi|429217097|ref|YP_007175087.1|	-	8.2e-10	38.6	0.5	4.8e-06	26.4	0.0	5.0	5	0	0	5	5	5	2	Type	II	secretion	system	(T2SS),	protein	F
PBP	PF01161.15	gi|429217098|ref|YP_007175088.1|	-	7.2e-37	126.4	0.0	8.7e-37	126.1	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Rhodanese	PF00581.15	gi|429217100|ref|YP_007175090.1|	-	3.8e-44	149.6	0.2	1.8e-23	83.0	0.0	2.2	2	0	0	2	2	2	2	Rhodanese-like	domain
SIS	PF01380.17	gi|429217101|ref|YP_007175091.1|	-	1.3e-45	154.1	3.6	8e-28	96.6	1.4	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_2	PF00310.16	gi|429217101|ref|YP_007175091.1|	-	1.7e-20	73.0	0.8	1.9e-13	49.8	0.1	2.3	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|429217101|ref|YP_007175091.1|	-	6.3e-20	71.4	0.0	1.2e-19	70.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|429217101|ref|YP_007175091.1|	-	1.5e-16	60.2	0.0	1e-15	57.5	0.0	2.1	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.1	gi|429217101|ref|YP_007175091.1|	-	1.5e-07	31.2	0.7	1.6e-06	27.8	0.1	2.6	1	1	0	2	2	2	1	SIS	domain
GATase_4	PF13230.1	gi|429217101|ref|YP_007175091.1|	-	3e-06	26.1	0.0	4.4e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
NTP_transferase	PF00483.18	gi|429217102|ref|YP_007175092.1|	-	1.7e-15	57.0	0.0	2.8e-15	56.2	0.0	1.4	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|429217102|ref|YP_007175092.1|	-	4.2e-13	49.6	0.0	5.9e-13	49.2	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|429217102|ref|YP_007175092.1|	-	4.3e-10	38.6	18.6	1.4e-05	24.3	0.1	5.1	4	1	1	5	5	5	3	Bacterial	transferase	hexapeptide	(six	repeats)
IspD	PF01128.14	gi|429217102|ref|YP_007175092.1|	-	2.5e-06	27.1	0.0	4.1e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Hexapep_2	PF14602.1	gi|429217102|ref|YP_007175092.1|	-	0.18	11.3	6.5	1.1	8.8	0.1	3.9	2	1	1	4	4	4	0	Hexapeptide	repeat	of	succinyl-transferase
Glyco_hydro_31	PF01055.21	gi|429217103|ref|YP_007175093.1|	-	4.7e-105	351.9	0.7	5.7e-105	351.6	0.5	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|429217103|ref|YP_007175093.1|	-	2.4e-13	49.7	1.5	1.4e-12	47.2	0.1	2.6	2	0	0	2	2	2	1	Galactose	mutarotase-like
Melibiase	PF02065.13	gi|429217103|ref|YP_007175093.1|	-	0.016	13.8	0.2	0.023	13.4	0.1	1.2	1	0	0	1	1	1	0	Melibiase
Glycos_transf_1	PF00534.15	gi|429217104|ref|YP_007175094.1|	-	5.3e-11	42.2	0.1	9.7e-11	41.3	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429217104|ref|YP_007175094.1|	-	5e-09	36.4	0.0	1.1e-08	35.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Polysacc_synt	PF01943.12	gi|429217105|ref|YP_007175095.1|	-	5.8e-14	52.0	31.5	5.8e-14	52.0	21.8	2.7	2	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|429217105|ref|YP_007175095.1|	-	1.3e-11	44.4	23.9	1.3e-11	44.4	16.6	2.2	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|429217105|ref|YP_007175095.1|	-	1e-05	25.3	16.8	1e-05	25.3	11.6	3.7	2	1	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
Lysis_S	PF04971.7	gi|429217105|ref|YP_007175095.1|	-	0.43	10.2	6.3	0.53	10.0	0.0	3.2	3	0	0	3	3	3	0	Lysis	protein	S
Glycos_transf_2	PF00535.21	gi|429217106|ref|YP_007175096.1|	-	2.1e-12	47.0	1.6	9e-12	44.9	1.1	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429217106|ref|YP_007175096.1|	-	7.3e-05	22.6	0.0	0.00011	22.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|429217107|ref|YP_007175097.1|	-	4.6e-12	45.9	3.9	4.6e-12	45.9	2.7	2.4	2	2	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429217107|ref|YP_007175097.1|	-	0.015	15.0	0.1	0.027	14.2	0.1	1.5	1	1	0	1	1	1	0	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|429217108|ref|YP_007175098.1|	-	3.4e-12	46.3	4.8	1.2e-11	44.6	3.3	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429217108|ref|YP_007175098.1|	-	6.9e-05	22.7	0.0	0.00017	21.5	0.0	1.6	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
DUF1310	PF07006.6	gi|429217108|ref|YP_007175098.1|	-	0.0032	16.9	1.0	0.035	13.6	0.1	2.4	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1310)
Glycos_transf_2	PF00535.21	gi|429217109|ref|YP_007175099.1|	-	1.2e-05	25.0	2.0	3e-05	23.7	1.4	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_4	PF13704.1	gi|429217109|ref|YP_007175099.1|	-	0.011	16.0	0.0	0.021	15.0	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Glyco_trans_1_4	PF13692.1	gi|429217110|ref|YP_007175100.1|	-	8.6e-17	61.5	0.0	1.4e-16	60.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|429217110|ref|YP_007175100.1|	-	6.3e-07	29.3	0.5	6.3e-07	29.3	0.3	2.5	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|429217110|ref|YP_007175100.1|	-	1.1e-05	24.9	0.6	2e-05	24.0	0.4	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|429217111|ref|YP_007175101.1|	-	4.2e-29	101.1	0.5	1.1e-28	99.8	0.4	1.6	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429217111|ref|YP_007175101.1|	-	2.6e-12	47.0	0.0	1.1e-11	45.0	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|429217111|ref|YP_007175101.1|	-	1.3e-06	28.0	0.1	7.4e-06	25.6	0.0	2.0	1	1	1	2	2	2	1	Starch	synthase	catalytic	domain
Glyco_transf_4	PF13439.1	gi|429217111|ref|YP_007175101.1|	-	6.2e-06	26.0	0.0	1.3e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|429217111|ref|YP_007175101.1|	-	0.0018	18.0	0.7	0.0018	18.0	0.5	2.5	3	0	0	3	3	3	1	Glycosyl	transferase	4-like
Glyco_trans_4_4	PF13579.1	gi|429217111|ref|YP_007175101.1|	-	0.0085	16.2	0.0	0.012	15.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
AlphaC_N	PF08829.5	gi|429217111|ref|YP_007175101.1|	-	0.012	14.9	0.5	0.027	13.8	0.1	1.7	2	0	0	2	2	2	0	Alpha	C	protein	N	terminal
PIGA	PF08288.7	gi|429217111|ref|YP_007175101.1|	-	0.015	15.5	0.0	0.69	10.3	0.0	2.8	2	1	1	3	3	3	0	PIGA	(GPI	anchor	biosynthesis)
OTCace	PF00185.19	gi|429217111|ref|YP_007175101.1|	-	0.042	13.7	0.0	0.15	11.9	0.0	1.9	1	1	0	1	1	1	0	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Methyltransf_21	PF05050.7	gi|429217112|ref|YP_007175102.1|	-	2.8e-06	27.3	0.4	1.8e-05	24.7	0.2	2.0	1	1	0	1	1	1	1	Methyltransferase	FkbM	domain
Glyco_tranf_2_3	PF13641.1	gi|429217113|ref|YP_007175103.1|	-	0.00077	19.3	0.0	0.0013	18.5	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|429217113|ref|YP_007175103.1|	-	0.0057	16.3	1.8	0.012	15.3	1.3	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glycos_transf_1	PF00534.15	gi|429217115|ref|YP_007175105.1|	-	2.9e-08	33.3	0.3	1.8e-07	30.7	0.2	2.1	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
NAS	PF03059.11	gi|429217115|ref|YP_007175105.1|	-	0.0052	15.9	0.8	0.02	14.0	0.0	2.1	2	1	0	2	2	2	1	Nicotianamine	synthase	protein
DUF58	PF01882.13	gi|429217117|ref|YP_007175107.1|	-	1.7e-09	37.6	0.1	3.2e-09	36.8	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
AAA_3	PF07726.6	gi|429217118|ref|YP_007175108.1|	-	2.8e-52	175.8	0.0	4e-52	175.2	0.0	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|429217118|ref|YP_007175108.1|	-	2.5e-12	46.7	0.0	3.9e-12	46.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|429217118|ref|YP_007175108.1|	-	4e-07	30.3	0.0	6.7e-07	29.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM	PF00493.18	gi|429217118|ref|YP_007175108.1|	-	3.4e-06	26.1	0.0	2e-05	23.5	0.0	1.9	2	0	0	2	2	2	1	MCM2/3/5	family
RuvB_N	PF05496.7	gi|429217118|ref|YP_007175108.1|	-	2.4e-05	23.5	0.0	0.00026	20.0	0.0	2.1	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Sigma54_activat	PF00158.21	gi|429217118|ref|YP_007175108.1|	-	0.00048	19.6	0.1	0.0061	16.0	0.1	2.1	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|429217118|ref|YP_007175108.1|	-	0.0024	18.2	0.1	0.0064	16.8	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|429217118|ref|YP_007175108.1|	-	0.012	16.4	0.1	0.033	14.9	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
TIP49	PF06068.8	gi|429217118|ref|YP_007175108.1|	-	0.014	14.1	1.0	0.023	13.4	0.1	1.7	2	0	0	2	2	2	0	TIP49	C-terminus
Mg_chelatase	PF01078.16	gi|429217118|ref|YP_007175108.1|	-	0.019	14.1	0.1	0.96	8.5	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_16	PF13191.1	gi|429217118|ref|YP_007175108.1|	-	0.029	14.3	0.0	0.4	10.6	0.0	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_2	PF07724.9	gi|429217118|ref|YP_007175108.1|	-	0.031	14.2	0.0	0.052	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_23	PF13476.1	gi|429217118|ref|YP_007175108.1|	-	0.055	13.7	0.6	0.085	13.1	0.4	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|429217118|ref|YP_007175108.1|	-	0.065	13.1	0.0	0.18	11.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|429217118|ref|YP_007175108.1|	-	0.11	12.0	0.1	0.22	11.1	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF4480	PF13715.1	gi|429217120|ref|YP_007175110.1|	-	2.3e-05	24.3	6.1	0.056	13.4	0.1	3.5	2	1	0	3	3	3	2	Domain	of	unknown	function	(DUF4480)
CarboxypepD_reg	PF13620.1	gi|429217120|ref|YP_007175110.1|	-	5e-05	23.2	0.2	0.45	10.5	0.0	3.3	3	0	0	3	3	3	2	Carboxypeptidase	regulatory-like	domain
LsmAD	PF06741.8	gi|429217120|ref|YP_007175110.1|	-	0.0094	16.0	0.7	0.027	14.5	0.5	1.8	1	0	0	1	1	1	1	LsmAD	domain
fn3_3	PF14686.1	gi|429217120|ref|YP_007175110.1|	-	5.5	7.1	7.1	0.94	9.6	0.1	3.1	4	0	0	4	4	4	0	Polysaccharide	lyase	family	4,	domain	II
DUF454	PF04304.8	gi|429217121|ref|YP_007175111.1|	-	0.065	13.2	4.9	2.9	8.0	0.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF454)
MNSV_P7B	PF06692.6	gi|429217121|ref|YP_007175111.1|	-	8.9	6.1	7.4	3.7	7.3	1.2	2.3	1	1	1	2	2	2	0	Melon	necrotic	spot	virus	P7B	protein
Leader_Erm	PF08253.6	gi|429217122|ref|YP_007175112.1|	-	0.5	9.8	2.8	1.6	8.2	1.9	1.8	1	0	0	1	1	1	0	Erm	Leader	peptide
DUF1616	PF07760.6	gi|429217123|ref|YP_007175113.1|	-	2e-17	63.2	12.9	2e-17	63.2	9.0	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1616)
DUF1616	PF07760.6	gi|429217124|ref|YP_007175114.1|	-	2.9e-09	36.4	6.9	3.1e-09	36.3	4.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
GBS_Bsp-like	PF08481.5	gi|429217124|ref|YP_007175114.1|	-	0.0073	16.1	0.7	0.017	14.9	0.2	1.8	2	0	0	2	2	2	1	GBS	Bsp-like	repeat
DUF3244	PF11589.3	gi|429217124|ref|YP_007175114.1|	-	0.032	13.9	1.2	0.24	11.1	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3244)
DUF3139	PF11337.3	gi|429217125|ref|YP_007175115.1|	-	0.16	12.2	0.4	0.16	12.2	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Glycos_transf_2	PF00535.21	gi|429217126|ref|YP_007175116.1|	-	7.6e-30	103.8	1.2	1.3e-29	103.0	0.8	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429217126|ref|YP_007175116.1|	-	1.7e-21	77.1	0.0	2.6e-21	76.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|429217126|ref|YP_007175116.1|	-	2.5e-09	36.6	2.0	3.8e-09	36.0	1.4	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|429217126|ref|YP_007175116.1|	-	0.00096	18.4	0.0	0.0026	17.0	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|429217126|ref|YP_007175116.1|	-	0.001	19.3	0.1	0.0021	18.3	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
COX5A	PF02284.11	gi|429217126|ref|YP_007175116.1|	-	0.0033	17.3	0.0	0.0076	16.1	0.0	1.5	1	0	0	1	1	1	1	Cytochrome	c	oxidase	subunit	Va
DUF374	PF04028.8	gi|429217126|ref|YP_007175116.1|	-	0.014	14.5	0.0	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF374)
YflT	PF11181.3	gi|429217126|ref|YP_007175116.1|	-	0.28	11.3	3.0	0.61	10.2	1.2	2.1	2	0	0	2	2	2	0	Heat	induced	stress	protein	YflT
ABC_tran	PF00005.22	gi|429217127|ref|YP_007175117.1|	-	4e-31	108.1	0.5	5.1e-31	107.7	0.3	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217127|ref|YP_007175117.1|	-	5.7e-11	42.9	8.0	1.8e-06	28.1	3.4	2.5	1	1	1	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|429217127|ref|YP_007175117.1|	-	0.00036	20.3	4.8	0.00048	19.8	3.3	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
RecA	PF00154.16	gi|429217127|ref|YP_007175117.1|	-	0.0004	19.5	0.0	0.0007	18.7	0.0	1.3	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_13	PF13166.1	gi|429217127|ref|YP_007175117.1|	-	0.00044	18.8	0.6	0.00044	18.8	0.4	1.7	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|429217127|ref|YP_007175117.1|	-	0.00095	18.4	5.8	0.067	12.4	4.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|429217127|ref|YP_007175117.1|	-	0.0014	18.9	10.7	0.0044	17.3	7.4	1.9	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|429217127|ref|YP_007175117.1|	-	0.0049	16.4	0.0	0.0088	15.6	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
KAP_NTPase	PF07693.9	gi|429217127|ref|YP_007175117.1|	-	0.0055	15.7	0.2	0.012	14.5	0.1	1.6	2	0	0	2	2	2	1	KAP	family	P-loop	domain
AAA_29	PF13555.1	gi|429217127|ref|YP_007175117.1|	-	0.0074	15.7	0.0	0.014	14.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_24	PF13479.1	gi|429217127|ref|YP_007175117.1|	-	0.0089	15.6	0.0	0.015	14.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|429217127|ref|YP_007175117.1|	-	0.0092	14.8	0.5	0.0095	14.8	0.3	1.4	1	1	0	1	1	1	1	NB-ARC	domain
SbcCD_C	PF13558.1	gi|429217127|ref|YP_007175117.1|	-	0.0099	15.7	0.2	0.098	12.5	0.2	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_14	PF13173.1	gi|429217127|ref|YP_007175117.1|	-	0.012	15.4	2.8	0.019	14.8	0.3	2.0	1	1	0	2	2	2	0	AAA	domain
ABC_ATPase	PF09818.4	gi|429217127|ref|YP_007175117.1|	-	0.019	13.5	0.7	0.67	8.4	0.2	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NACHT	PF05729.7	gi|429217127|ref|YP_007175117.1|	-	0.019	14.5	0.0	0.03	13.9	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
DUF258	PF03193.11	gi|429217127|ref|YP_007175117.1|	-	0.021	13.9	0.9	0.028	13.6	0.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|429217127|ref|YP_007175117.1|	-	0.025	15.3	0.8	0.08	13.7	0.6	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|429217127|ref|YP_007175117.1|	-	0.025	14.6	0.0	0.094	12.8	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|429217127|ref|YP_007175117.1|	-	0.031	14.4	0.3	0.24	11.6	0.2	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SE	PF00437.15	gi|429217127|ref|YP_007175117.1|	-	0.035	13.0	0.8	0.089	11.6	0.1	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_16	PF13191.1	gi|429217127|ref|YP_007175117.1|	-	0.04	13.8	0.0	0.048	13.6	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
Zot	PF05707.7	gi|429217127|ref|YP_007175117.1|	-	0.058	12.8	0.0	0.11	11.9	0.0	1.5	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_25	PF13481.1	gi|429217127|ref|YP_007175117.1|	-	0.079	12.3	0.0	0.26	10.6	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DUF3584	PF12128.3	gi|429217127|ref|YP_007175117.1|	-	0.11	9.8	0.3	0.14	9.4	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_18	PF13238.1	gi|429217127|ref|YP_007175117.1|	-	0.11	12.7	3.4	0.4	10.9	2.4	2.1	1	1	0	1	1	1	0	AAA	domain
FtsX	PF02687.16	gi|429217130|ref|YP_007175120.1|	-	2e-05	24.3	20.4	2e-05	24.3	14.1	2.5	2	1	0	2	2	2	1	FtsX-like	permease	family
dTDP_sugar_isom	PF00908.12	gi|429217131|ref|YP_007175121.1|	-	4e-67	224.9	0.1	4.6e-67	224.7	0.1	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
FdtA	PF05523.6	gi|429217131|ref|YP_007175121.1|	-	0.00056	19.4	0.1	0.00094	18.6	0.0	1.4	1	1	0	1	1	1	1	WxcM-like,	C-terminal
Poty_coat	PF00767.13	gi|429217131|ref|YP_007175121.1|	-	0.0085	15.3	0.1	0.16	11.2	0.0	2.1	1	1	1	2	2	2	1	Potyvirus	coat	protein
NTP_transferase	PF00483.18	gi|429217132|ref|YP_007175122.1|	-	5.8e-49	166.6	0.0	7.5e-49	166.2	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|429217132|ref|YP_007175122.1|	-	4.2e-10	39.9	0.0	5.7e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|429217132|ref|YP_007175122.1|	-	1.2e-05	24.5	8.8	0.91	9.1	0.0	4.6	2	1	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.7	gi|429217132|ref|YP_007175122.1|	-	0.0031	16.1	0.7	0.0055	15.3	0.4	1.4	1	1	0	1	1	1	1	L-fucokinase
FixH	PF05751.6	gi|429217132|ref|YP_007175122.1|	-	0.078	12.7	0.0	0.12	12.1	0.0	1.2	1	0	0	1	1	1	0	FixH
Epimerase	PF01370.16	gi|429217133|ref|YP_007175123.1|	-	9.4e-57	192.1	0.0	1.2e-56	191.8	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|429217133|ref|YP_007175123.1|	-	2.7e-18	65.8	0.0	3.6e-18	65.4	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|429217133|ref|YP_007175123.1|	-	5.6e-17	61.3	0.0	7.6e-17	60.9	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|429217133|ref|YP_007175123.1|	-	3.4e-16	58.9	0.0	1.4e-14	53.6	0.0	2.2	1	1	0	1	1	1	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|429217133|ref|YP_007175123.1|	-	3.2e-09	36.1	0.2	1.5e-08	33.8	0.1	2.0	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
adh_short	PF00106.20	gi|429217133|ref|YP_007175123.1|	-	8.3e-05	22.5	0.0	0.00029	20.8	0.0	1.7	2	0	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.5	gi|429217133|ref|YP_007175123.1|	-	0.00028	20.5	0.0	0.00051	19.7	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|429217133|ref|YP_007175123.1|	-	0.018	15.0	0.0	0.038	13.9	0.0	1.5	1	1	0	1	1	1	0	NADH(P)-binding
TrkA_N	PF02254.13	gi|429217133|ref|YP_007175123.1|	-	0.038	13.9	0.1	0.11	12.4	0.1	1.8	1	0	0	1	1	1	0	TrkA-N	domain
RmlD_sub_bind	PF04321.12	gi|429217134|ref|YP_007175124.1|	-	5.2e-61	206.0	0.0	5.9e-61	205.8	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|429217134|ref|YP_007175124.1|	-	2.3e-24	86.1	0.1	3.6e-24	85.4	0.1	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|429217134|ref|YP_007175124.1|	-	3.4e-09	36.0	0.8	1.1e-08	34.3	0.2	2.0	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|429217134|ref|YP_007175124.1|	-	4.2e-07	29.1	0.0	6e-07	28.6	0.0	1.2	1	0	0	1	1	1	1	Male	sterility	protein
Glycos_transf_1	PF00534.15	gi|429217135|ref|YP_007175125.1|	-	1.1e-11	44.4	0.1	2.5e-11	43.3	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429217135|ref|YP_007175125.1|	-	3.2e-09	37.0	0.0	7.2e-09	35.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF4507	PF14964.1	gi|429217135|ref|YP_007175125.1|	-	0.053	12.2	0.2	0.33	9.6	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4507)
DUF4201	PF13870.1	gi|429217135|ref|YP_007175125.1|	-	2.9	7.3	7.0	0.12	11.7	0.2	2.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4201)
Phosphodiest	PF01663.17	gi|429217136|ref|YP_007175126.1|	-	2.9e-21	76.2	0.0	3.6e-21	75.8	0.0	1.2	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
BPD_transp_1	PF00528.17	gi|429217137|ref|YP_007175127.1|	-	1.1e-13	51.1	26.2	1.1e-13	51.1	18.1	2.3	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|429217138|ref|YP_007175128.1|	-	1.7e-08	34.1	30.2	1.7e-08	34.1	20.9	2.2	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
PDGLE	PF13190.1	gi|429217139|ref|YP_007175129.1|	-	0.31	10.7	2.4	11	5.8	0.0	3.1	3	0	0	3	3	3	0	PDGLE	domain
GalP_UDP_transf	PF01087.17	gi|429217140|ref|YP_007175130.1|	-	4.5e-28	98.5	0.0	7e-28	97.9	0.0	1.3	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	N-terminal	domain
GalP_UDP_tr_C	PF02744.12	gi|429217140|ref|YP_007175130.1|	-	2.4e-15	56.4	0.2	3.9e-15	55.7	0.1	1.3	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	C-terminal	domain
DcpS_C	PF11969.3	gi|429217140|ref|YP_007175130.1|	-	2.5e-05	24.4	1.4	0.00038	20.6	0.3	2.2	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
HIT	PF01230.18	gi|429217140|ref|YP_007175130.1|	-	0.015	15.8	0.0	0.52	10.8	0.0	2.3	2	0	0	2	2	2	0	HIT	domain
GalKase_gal_bdg	PF10509.4	gi|429217141|ref|YP_007175131.1|	-	3.7e-16	58.1	0.1	9.4e-16	56.8	0.1	1.6	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
GHMP_kinases_N	PF00288.21	gi|429217141|ref|YP_007175131.1|	-	2.1e-14	53.3	1.2	1.7e-13	50.4	0.0	2.5	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|429217141|ref|YP_007175131.1|	-	5.4e-13	48.9	0.1	9.6e-13	48.1	0.1	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
DUF4355	PF14265.1	gi|429217141|ref|YP_007175131.1|	-	0.013	15.4	3.4	0.024	14.5	2.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
ABC_tran	PF00005.22	gi|429217142|ref|YP_007175132.1|	-	7.6e-31	107.2	0.0	1.5e-30	106.2	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217142|ref|YP_007175132.1|	-	1.5e-09	38.2	4.8	2.2e-05	24.5	0.0	3.1	2	1	0	3	3	3	2	AAA	domain
AAA_10	PF12846.2	gi|429217142|ref|YP_007175132.1|	-	0.0016	17.9	0.0	0.036	13.5	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
SbcCD_C	PF13558.1	gi|429217142|ref|YP_007175132.1|	-	0.0019	18.1	0.0	0.0044	16.9	0.0	1.6	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|429217142|ref|YP_007175132.1|	-	0.002	17.2	4.1	0.0078	15.3	0.0	2.8	3	0	0	3	3	3	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|429217142|ref|YP_007175132.1|	-	0.006	16.8	0.1	0.084	13.1	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|429217142|ref|YP_007175132.1|	-	0.01	16.6	0.1	0.031	15.1	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|429217142|ref|YP_007175132.1|	-	0.029	14.5	0.0	0.22	11.7	0.0	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|429217142|ref|YP_007175132.1|	-	0.13	11.8	0.0	0.27	10.7	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_28	PF13521.1	gi|429217142|ref|YP_007175132.1|	-	0.18	11.7	0.0	0.43	10.5	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|429217142|ref|YP_007175132.1|	-	0.33	10.9	1.9	1.2	9.1	1.3	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_23	PF13476.1	gi|429217142|ref|YP_007175132.1|	-	2.6	8.3	5.8	0.53	10.5	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
Glycos_transf_2	PF00535.21	gi|429217143|ref|YP_007175133.1|	-	1.3e-15	57.4	4.5	1.3e-15	57.4	3.1	1.9	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429217143|ref|YP_007175133.1|	-	4e-05	23.5	0.0	5.9e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
HTH_24	PF13412.1	gi|429217143|ref|YP_007175133.1|	-	4.3e-05	22.8	3.7	8.9e-05	21.7	2.6	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|429217143|ref|YP_007175133.1|	-	0.093	12.4	0.2	0.21	11.3	0.1	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Glycos_transf_1	PF00534.15	gi|429217144|ref|YP_007175134.1|	-	3.2e-19	69.0	0.4	5.8e-19	68.1	0.3	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429217144|ref|YP_007175134.1|	-	2.7e-10	40.5	0.0	4.6e-10	39.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|429217144|ref|YP_007175134.1|	-	0.0001	22.0	0.0	0.0018	18.0	0.0	2.7	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
Ufd2P_core	PF10408.4	gi|429217144|ref|YP_007175134.1|	-	0.00081	17.7	0.0	0.0011	17.3	0.0	1.3	1	0	0	1	1	1	1	Ubiquitin	elongating	factor	core
B5	PF03484.10	gi|429217144|ref|YP_007175134.1|	-	0.072	12.9	0.6	0.22	11.3	0.1	2.1	2	0	0	2	2	2	0	tRNA	synthetase	B5	domain
Glycos_transf_2	PF00535.21	gi|429217145|ref|YP_007175135.1|	-	1.7e-18	66.9	1.1	2.4e-18	66.3	0.5	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|429217145|ref|YP_007175135.1|	-	5.2e-07	29.6	0.0	6.9e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|429217145|ref|YP_007175135.1|	-	0.001	18.4	0.0	0.0017	17.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Ribosomal_L4	PF00573.17	gi|429217145|ref|YP_007175135.1|	-	0.093	12.1	0.0	0.2	10.9	0.0	1.5	1	1	0	1	1	1	0	Ribosomal	protein	L4/L1	family
SBP_bac_5	PF00496.17	gi|429217146|ref|YP_007175136.1|	-	2.6e-43	148.2	5.6	5.7e-43	147.1	3.9	1.6	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|429217146|ref|YP_007175136.1|	-	5e-06	26.1	0.7	5e-06	26.1	0.5	4.2	3	1	0	4	4	4	2	PKD	domain
Shisa	PF13908.1	gi|429217146|ref|YP_007175136.1|	-	0.055	13.6	2.3	0.11	12.6	1.6	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
MFS_1	PF07690.11	gi|429217147|ref|YP_007175137.1|	-	7.9e-40	136.6	54.0	7.9e-40	136.6	37.4	2.7	1	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429217147|ref|YP_007175137.1|	-	3.6e-05	22.5	13.1	3.6e-05	22.5	9.1	2.9	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|429217147|ref|YP_007175137.1|	-	7.5e-05	21.0	20.5	0.00018	19.8	2.6	3.2	2	1	1	3	3	3	3	Transmembrane	secretion	effector
DUF2633	PF11119.3	gi|429217147|ref|YP_007175137.1|	-	1.3	8.7	3.7	3.7	7.3	0.2	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2633)
DUF3040	PF11239.3	gi|429217147|ref|YP_007175137.1|	-	3.1	7.9	0.0	3.1	7.9	0.0	4.3	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF3040)
DUF89	PF01937.14	gi|429217148|ref|YP_007175138.1|	-	1.9e-14	53.2	6.0	2.3e-12	46.3	1.9	2.9	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF89
Glyco_trans_4_2	PF13477.1	gi|429217148|ref|YP_007175138.1|	-	0.0062	16.3	3.1	0.0063	16.3	0.7	2.1	2	1	1	3	3	3	1	Glycosyl	transferase	4-like
Aminotran_5	PF00266.14	gi|429217149|ref|YP_007175139.1|	-	1.6e-23	83.0	0.0	1.8e-23	82.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Shikimate_DH	PF01488.15	gi|429217149|ref|YP_007175139.1|	-	0.095	12.7	0.5	0.42	10.7	0.0	2.3	3	1	1	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|429217150|ref|YP_007175140.1|	-	1.4e-53	180.7	0.1	2.3e-53	179.9	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|429217150|ref|YP_007175140.1|	-	1.8e-26	92.1	0.0	2.2e-26	91.8	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|429217150|ref|YP_007175140.1|	-	0.00026	20.8	0.1	0.00047	20.0	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|429217150|ref|YP_007175140.1|	-	0.0087	15.9	0.3	0.046	13.5	0.0	2.3	2	1	1	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DUF3206	PF11472.3	gi|429217150|ref|YP_007175140.1|	-	0.0091	15.7	0.0	0.021	14.6	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3206)
ELFV_dehydrog	PF00208.16	gi|429217150|ref|YP_007175140.1|	-	0.021	14.3	0.1	0.036	13.6	0.1	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Gp_dh_N	PF00044.19	gi|429217150|ref|YP_007175140.1|	-	0.023	14.6	0.1	0.037	13.9	0.0	1.4	1	0	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|429217150|ref|YP_007175140.1|	-	0.041	13.2	0.1	0.12	11.6	0.0	1.8	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ATP_bind_4	PF01902.12	gi|429217151|ref|YP_007175141.1|	-	2.5e-37	128.3	0.1	2.9e-37	128.1	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
Acetyltransf_4	PF13420.1	gi|429217152|ref|YP_007175142.1|	-	6.9e-05	22.8	0.2	8.9e-05	22.4	0.2	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|429217152|ref|YP_007175142.1|	-	8.4e-05	22.2	0.0	0.00014	21.5	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
GNAT_acetyltran	PF12746.2	gi|429217152|ref|YP_007175142.1|	-	0.00014	20.8	0.0	0.00016	20.5	0.0	1.2	1	0	0	1	1	1	1	GNAT	acetyltransferase
Acetyltransf_1	PF00583.19	gi|429217152|ref|YP_007175142.1|	-	0.00082	19.3	0.1	0.0057	16.6	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|429217152|ref|YP_007175142.1|	-	0.027	14.5	0.0	0.043	13.9	0.0	1.4	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|429217152|ref|YP_007175142.1|	-	0.03	14.4	0.0	0.042	14.0	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Fer4_13	PF13370.1	gi|429217153|ref|YP_007175143.1|	-	5.7e-16	58.6	0.2	7.9e-16	58.2	0.2	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|429217153|ref|YP_007175143.1|	-	3.4e-15	56.3	0.5	4.2e-15	56.0	0.3	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_19	PF06902.6	gi|429217153|ref|YP_007175143.1|	-	0.066	13.0	0.6	0.42	10.4	0.4	2.1	1	1	0	1	1	1	0	Divergent	4Fe-4S	mono-cluster
Mtp	PF03821.11	gi|429217154|ref|YP_007175144.1|	-	0.031	13.6	1.9	0.03	13.7	1.3	1.0	1	0	0	1	1	1	0	Golgi	4-transmembrane	spanning	transporter
MFS_1	PF07690.11	gi|429217155|ref|YP_007175145.1|	-	8.4e-22	77.3	46.2	9.1e-13	47.6	17.5	2.1	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|429217155|ref|YP_007175145.1|	-	0.0012	17.0	7.2	0.0027	15.8	0.6	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
MFS_2	PF13347.1	gi|429217155|ref|YP_007175145.1|	-	0.0054	15.1	32.7	0.027	12.8	14.3	2.8	1	1	0	2	2	2	2	MFS/sugar	transport	protein
tRNA_anti-codon	PF01336.20	gi|429217156|ref|YP_007175146.1|	-	5.2e-05	23.0	0.2	7.8e-05	22.4	0.1	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
MFS_1	PF07690.11	gi|429217157|ref|YP_007175147.1|	-	4.6e-20	71.6	50.6	1.4e-12	47.0	17.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|429217157|ref|YP_007175147.1|	-	0.0011	18.9	8.9	0.0049	16.8	0.4	3.1	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF1228)
MFS_3	PF05977.8	gi|429217157|ref|YP_007175147.1|	-	0.0046	15.1	0.2	0.0046	15.1	0.1	2.5	3	0	0	3	3	3	2	Transmembrane	secretion	effector
PDR_CDR	PF06422.7	gi|429217157|ref|YP_007175147.1|	-	5.2	6.7	13.0	0.67	9.6	0.2	3.9	3	1	1	4	4	4	0	CDR	ABC	transporter
PmbA_TldD	PF01523.11	gi|429217158|ref|YP_007175148.1|	-	3e-44	151.4	2.3	3.8e-44	151.1	1.6	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|429217159|ref|YP_007175149.1|	-	4.7e-33	114.7	0.0	6.2e-33	114.3	0.0	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Radical_SAM	PF04055.16	gi|429217161|ref|YP_007175151.1|	-	1.6e-20	73.9	0.1	3.1e-19	69.7	0.0	2.1	1	1	1	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.1	gi|429217161|ref|YP_007175151.1|	-	3.4e-10	40.1	0.6	1.1e-09	38.5	0.4	1.9	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.1	gi|429217161|ref|YP_007175151.1|	-	4.4e-10	39.8	0.1	1.3e-09	38.2	0.0	1.8	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|429217161|ref|YP_007175151.1|	-	4.3e-07	29.9	0.1	6.9e-06	26.0	0.0	2.4	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fusion_gly	PF00523.13	gi|429217161|ref|YP_007175151.1|	-	0.0075	14.3	0.2	0.01	13.9	0.2	1.2	1	0	0	1	1	1	1	Fusion	glycoprotein	F0
AP_endonuc_2	PF01261.19	gi|429217161|ref|YP_007175151.1|	-	0.01	15.1	0.0	0.36	10.0	0.0	2.7	3	0	0	3	3	3	0	Xylose	isomerase-like	TIM	barrel
LAGLIDADG_1	PF00961.14	gi|429217161|ref|YP_007175151.1|	-	1.2	9.7	15.4	0.67	10.5	4.8	3.5	2	1	1	3	3	3	0	LAGLIDADG	endonuclease
GCV_H	PF01597.14	gi|429217162|ref|YP_007175152.1|	-	5.9e-39	132.5	0.5	7.3e-39	132.2	0.3	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|429217162|ref|YP_007175152.1|	-	4.3e-05	23.0	0.4	0.00027	20.5	0.0	2.2	2	1	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|429217162|ref|YP_007175152.1|	-	0.11	12.2	0.0	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
FAD_binding_2	PF00890.19	gi|429217163|ref|YP_007175153.1|	-	3.1e-102	342.5	0.0	3.7e-102	342.2	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|429217163|ref|YP_007175153.1|	-	7.4e-43	145.4	0.0	1.1e-42	144.9	0.0	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Thi4	PF01946.12	gi|429217163|ref|YP_007175153.1|	-	0.0092	15.0	0.2	0.2	10.7	0.1	2.2	2	0	0	2	2	2	1	Thi4	family
Pyr_redox_2	PF07992.9	gi|429217163|ref|YP_007175153.1|	-	0.023	14.5	0.5	0.2	11.4	0.1	2.3	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|429217163|ref|YP_007175153.1|	-	0.074	11.8	0.5	0.16	10.7	0.0	1.7	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|429217163|ref|YP_007175153.1|	-	0.1	11.4	0.0	0.14	11.0	0.0	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Sdh_cyt	PF01127.17	gi|429217164|ref|YP_007175154.1|	-	3.6e-10	39.7	7.1	5.5e-10	39.1	4.7	1.4	1	1	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
Ferric_reduct	PF01794.14	gi|429217164|ref|YP_007175154.1|	-	0.0043	17.1	0.5	0.016	15.3	0.4	2.0	1	1	0	1	1	1	1	Ferric	reductase	like	transmembrane	component
DUF4006	PF13179.1	gi|429217164|ref|YP_007175154.1|	-	0.043	13.3	0.0	0.1	12.1	0.0	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF4006)
Cytochrom_B_N	PF00033.14	gi|429217164|ref|YP_007175154.1|	-	0.085	12.2	11.2	0.81	9.0	0.9	2.4	2	1	1	3	3	3	0	Cytochrome	b(N-terminal)/b6/petB
COX4	PF02936.9	gi|429217164|ref|YP_007175154.1|	-	0.1	12.3	0.0	0.23	11.1	0.0	1.6	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	IV
PepSY_TM_2	PF13703.1	gi|429217164|ref|YP_007175154.1|	-	6.3	7.0	11.6	0.36	11.0	0.2	3.0	2	1	0	2	2	2	0	PepSY-associated	TM	helix
Sdh_cyt	PF01127.17	gi|429217165|ref|YP_007175155.1|	-	1.3e-08	34.6	7.6	1.8e-08	34.2	5.2	1.2	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
NS3_envE	PF02723.9	gi|429217165|ref|YP_007175155.1|	-	0.0067	16.3	1.2	0.0067	16.3	0.8	2.3	2	1	0	2	2	2	1	Non-structural	protein	NS3/Small	envelope	protein	E
DUF4267	PF14087.1	gi|429217165|ref|YP_007175155.1|	-	0.031	13.8	0.9	0.031	13.8	0.6	1.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4267)
DUF2427	PF10348.4	gi|429217165|ref|YP_007175155.1|	-	0.73	9.4	5.9	2.8	7.5	0.4	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2427)
DUF1691	PF07950.6	gi|429217165|ref|YP_007175155.1|	-	0.87	9.5	4.2	0.83	9.5	1.7	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1691)
Fer2_3	PF13085.1	gi|429217166|ref|YP_007175156.1|	-	1.9e-36	124.1	0.0	3.2e-36	123.4	0.0	1.3	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|429217166|ref|YP_007175156.1|	-	2.1e-07	30.8	4.0	2.1e-07	30.8	2.8	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429217166|ref|YP_007175156.1|	-	7e-07	29.5	3.7	7e-07	29.5	2.6	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.22	gi|429217166|ref|YP_007175156.1|	-	4.4e-06	26.3	0.2	4.4e-06	26.3	0.1	2.1	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.22	gi|429217166|ref|YP_007175156.1|	-	4.8e-05	22.7	1.1	4.8e-05	22.7	0.8	3.8	4	0	0	4	4	4	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217166|ref|YP_007175156.1|	-	7.9e-05	22.3	11.4	0.00016	21.4	4.7	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|429217166|ref|YP_007175156.1|	-	0.00011	22.6	8.4	0.024	15.0	0.2	2.6	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217166|ref|YP_007175156.1|	-	0.00016	21.8	12.8	0.0011	19.1	3.8	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer2_4	PF13510.1	gi|429217166|ref|YP_007175156.1|	-	0.00053	19.7	0.1	0.001	18.8	0.0	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_7	PF12838.2	gi|429217166|ref|YP_007175156.1|	-	0.00068	19.9	12.4	0.0053	17.1	6.5	3.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|429217166|ref|YP_007175156.1|	-	0.0066	16.3	15.3	0.012	15.5	0.5	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|429217166|ref|YP_007175156.1|	-	0.01	15.6	0.4	0.01	15.6	0.2	3.0	3	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|429217166|ref|YP_007175156.1|	-	0.027	14.1	3.2	0.69	9.5	0.1	2.4	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_4	PF12800.2	gi|429217166|ref|YP_007175156.1|	-	0.031	14.6	1.4	0.031	14.6	1.0	3.4	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|429217166|ref|YP_007175156.1|	-	0.032	14.1	1.5	0.032	14.1	1.1	3.0	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|429217166|ref|YP_007175156.1|	-	1.1	9.8	5.8	1.3	9.6	0.2	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|429217166|ref|YP_007175156.1|	-	3.8	8.3	12.4	0.78	10.5	4.9	2.6	2	1	0	2	2	1	0	4Fe-4S	double	cluster	binding	domain
RHH_1	PF01402.16	gi|429217167|ref|YP_007175157.1|	-	3.3e-11	42.5	0.2	4.4e-11	42.1	0.2	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|429217167|ref|YP_007175157.1|	-	1.2e-07	31.3	0.6	1.6e-07	30.9	0.4	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RHH_4	PF13467.1	gi|429217167|ref|YP_007175157.1|	-	0.0064	16.3	0.0	0.0069	16.2	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
PDEase_I_N	PF08499.7	gi|429217167|ref|YP_007175157.1|	-	0.11	12.3	0.1	0.15	11.9	0.1	1.2	1	0	0	1	1	1	0	3'5'-cyclic	nucleotide	phosphodiesterase	N-terminal
Sda	PF08970.5	gi|429217167|ref|YP_007175157.1|	-	0.35	10.3	1.8	9.4	5.8	0.0	2.1	1	1	1	2	2	2	0	Sporulation	inhibitor	A
ADIP	PF11559.3	gi|429217168|ref|YP_007175158.1|	-	0.0062	16.4	3.9	0.0076	16.1	2.6	1.3	1	1	0	1	1	1	1	Afadin-	and	alpha	-actinin-Binding
HSBP1	PF06825.7	gi|429217168|ref|YP_007175158.1|	-	0.0083	15.6	0.0	4.8	6.8	0.0	2.5	2	1	0	2	2	2	2	Heat	shock	factor	binding	protein	1
Striatin	PF08232.7	gi|429217168|ref|YP_007175158.1|	-	0.023	15.0	2.4	0.037	14.3	1.7	1.4	1	0	0	1	1	1	0	Striatin	family
RHH_3	PF12651.2	gi|429217168|ref|YP_007175158.1|	-	0.044	13.5	5.1	0.1	12.3	0.1	3.0	3	0	0	3	3	3	0	Ribbon-helix-helix	domain
CorA	PF01544.13	gi|429217168|ref|YP_007175158.1|	-	0.081	11.9	0.8	0.12	11.4	0.6	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
RSS_P20	PF11757.3	gi|429217168|ref|YP_007175158.1|	-	0.11	12.5	0.3	0.16	12.1	0.2	1.3	1	1	0	1	1	1	0	Suppressor	of	RNA	silencing	P21-like
Syntaxin-6_N	PF09177.6	gi|429217168|ref|YP_007175158.1|	-	0.39	11.1	2.6	3.3	8.1	0.5	2.3	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
FlaC_arch	PF05377.6	gi|429217168|ref|YP_007175158.1|	-	0.57	10.1	5.1	11	6.0	0.1	2.9	2	1	0	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
DUF1152	PF06626.7	gi|429217169|ref|YP_007175159.1|	-	2.6e-101	338.6	0.0	3.2e-101	338.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
adh_short_C2	PF13561.1	gi|429217170|ref|YP_007175160.1|	-	1.7e-16	60.7	0.0	2e-16	60.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|429217170|ref|YP_007175160.1|	-	1.2e-12	48.1	0.0	2.1e-12	47.2	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|429217170|ref|YP_007175160.1|	-	0.0007	19.3	0.0	0.001	18.7	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|429217170|ref|YP_007175160.1|	-	0.0035	16.7	0.1	0.0051	16.2	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|429217170|ref|YP_007175160.1|	-	0.053	13.5	0.0	0.089	12.7	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
FadA	PF09403.5	gi|429217171|ref|YP_007175161.1|	-	0.0075	16.2	0.2	0.013	15.5	0.1	1.3	1	0	0	1	1	1	1	Adhesion	protein	FadA
FAD_binding_2	PF00890.19	gi|429217172|ref|YP_007175162.1|	-	4.8e-112	374.8	0.0	5.9e-112	374.5	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|429217172|ref|YP_007175162.1|	-	4.6e-37	126.7	0.1	7.1e-37	126.1	0.1	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.9	gi|429217172|ref|YP_007175162.1|	-	3.9e-06	26.8	7.3	3.2e-05	23.9	2.7	3.2	2	2	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|429217172|ref|YP_007175162.1|	-	0.002	17.0	1.8	0.013	14.4	1.3	2.0	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|429217172|ref|YP_007175162.1|	-	0.0029	16.1	0.8	0.99	7.7	0.3	3.3	3	0	0	3	3	3	1	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|429217172|ref|YP_007175162.1|	-	0.0072	15.4	0.2	0.32	10.0	0.2	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|429217172|ref|YP_007175162.1|	-	0.013	14.4	0.1	0.03	13.2	0.1	1.6	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|429217172|ref|YP_007175162.1|	-	0.16	11.0	1.0	0.75	8.8	0.3	2.4	2	1	0	2	2	2	0	Thi4	family
DUF378	PF04070.7	gi|429217174|ref|YP_007175164.1|	-	0.015	14.9	0.3	0.015	14.9	0.2	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF378)
Fer2_3	PF13085.1	gi|429217175|ref|YP_007175165.1|	-	4.5e-32	110.1	0.0	9.2e-32	109.1	0.0	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|429217175|ref|YP_007175165.1|	-	9.4e-11	41.5	0.6	9.4e-11	41.5	0.4	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|429217175|ref|YP_007175165.1|	-	5.6e-10	39.5	2.6	0.00056	20.2	0.3	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217175|ref|YP_007175165.1|	-	2.5e-09	37.2	9.0	2.6e-07	30.7	1.0	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|429217175|ref|YP_007175165.1|	-	1.9e-08	34.5	2.5	3.5e-08	33.7	0.2	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429217175|ref|YP_007175165.1|	-	1.6e-07	31.5	0.5	1.6e-07	31.5	0.4	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|429217175|ref|YP_007175165.1|	-	2.2e-07	30.5	2.8	2.2e-07	30.5	2.0	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.22	gi|429217175|ref|YP_007175165.1|	-	1.2e-06	28.1	1.8	1.6e-06	27.7	0.1	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.22	gi|429217175|ref|YP_007175165.1|	-	2.1e-05	23.9	2.0	2.1e-05	23.9	1.4	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|429217175|ref|YP_007175165.1|	-	0.00024	20.8	1.2	0.00024	20.8	0.8	3.3	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|429217175|ref|YP_007175165.1|	-	0.00074	20.2	6.9	0.0011	19.6	2.7	2.6	2	1	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|429217175|ref|YP_007175165.1|	-	0.0015	18.7	0.6	0.0015	18.7	0.4	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|429217175|ref|YP_007175165.1|	-	0.0038	17.0	2.5	0.0038	17.0	1.7	2.8	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|429217175|ref|YP_007175165.1|	-	0.0043	16.8	6.1	0.023	14.5	0.2	2.6	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|429217175|ref|YP_007175165.1|	-	0.0063	16.9	11.9	0.02	15.4	2.8	3.2	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|429217175|ref|YP_007175165.1|	-	0.022	14.3	0.4	0.72	9.5	0.1	2.5	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer2_4	PF13510.1	gi|429217175|ref|YP_007175165.1|	-	0.15	11.9	0.1	0.39	10.5	0.1	1.7	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_15	PF13459.1	gi|429217175|ref|YP_007175165.1|	-	0.47	11.0	6.3	4.5	7.8	1.1	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
ABC_tran	PF00005.22	gi|429217176|ref|YP_007175166.1|	-	3.6e-32	111.5	0.0	7.6e-32	110.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217176|ref|YP_007175166.1|	-	4.3e-16	59.7	3.3	1.3e-09	38.4	0.1	2.6	2	1	1	3	3	3	2	AAA	domain
AAA_29	PF13555.1	gi|429217176|ref|YP_007175166.1|	-	3.1e-05	23.3	0.1	5.7e-05	22.5	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|429217176|ref|YP_007175166.1|	-	0.0004	19.6	0.2	0.0017	17.6	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|429217176|ref|YP_007175166.1|	-	0.0011	18.0	11.6	0.013	14.5	1.2	2.9	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|429217176|ref|YP_007175166.1|	-	0.0013	18.7	0.0	0.0019	18.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|429217176|ref|YP_007175166.1|	-	0.0023	17.1	0.4	0.0073	15.5	0.1	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|429217176|ref|YP_007175166.1|	-	0.0031	17.6	0.4	0.027	14.6	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
MutS_V	PF00488.16	gi|429217176|ref|YP_007175166.1|	-	0.0033	16.8	0.1	0.0064	15.9	0.0	1.4	1	0	0	1	1	1	1	MutS	domain	V
AAA_33	PF13671.1	gi|429217176|ref|YP_007175166.1|	-	0.0079	16.0	0.0	0.029	14.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|429217176|ref|YP_007175166.1|	-	0.0085	16.0	0.0	0.02	14.8	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|429217176|ref|YP_007175166.1|	-	0.0092	15.4	0.0	0.017	14.5	0.0	1.5	1	0	0	1	1	1	1	AAA-like	domain
Arch_ATPase	PF01637.13	gi|429217176|ref|YP_007175166.1|	-	0.01	15.5	0.7	0.019	14.6	0.0	1.9	2	1	0	2	2	2	0	Archaeal	ATPase
AAA_23	PF13476.1	gi|429217176|ref|YP_007175166.1|	-	0.011	16.0	9.1	0.28	11.5	6.3	2.5	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|429217176|ref|YP_007175166.1|	-	0.012	14.7	0.0	0.023	13.7	0.0	1.6	2	1	0	2	2	2	0	Zeta	toxin
SRP54	PF00448.17	gi|429217176|ref|YP_007175166.1|	-	0.014	14.8	0.0	0.02	14.3	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
MobB	PF03205.9	gi|429217176|ref|YP_007175166.1|	-	0.033	13.8	0.0	0.066	12.9	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ArgK	PF03308.11	gi|429217176|ref|YP_007175166.1|	-	0.034	12.9	0.0	0.055	12.2	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_25	PF13481.1	gi|429217176|ref|YP_007175166.1|	-	0.037	13.4	0.0	0.074	12.4	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
TM1506	PF08973.5	gi|429217176|ref|YP_007175166.1|	-	0.05	13.1	0.5	0.13	11.7	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1893)
T2SE	PF00437.15	gi|429217176|ref|YP_007175166.1|	-	0.056	12.3	0.0	0.19	10.5	0.0	1.9	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_14	PF13173.1	gi|429217176|ref|YP_007175166.1|	-	0.076	12.9	0.1	0.31	10.9	0.0	2.1	2	1	1	3	3	3	0	AAA	domain
AAA_30	PF13604.1	gi|429217176|ref|YP_007175166.1|	-	0.088	12.3	0.1	0.25	10.8	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|429217176|ref|YP_007175166.1|	-	0.11	12.1	0.1	0.2	11.2	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Glyco_hydro_20b	PF02838.10	gi|429217176|ref|YP_007175166.1|	-	0.13	12.7	0.0	0.27	11.7	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	20,	domain	2
DUF2813	PF11398.3	gi|429217176|ref|YP_007175166.1|	-	0.16	11.0	0.5	0.4	9.7	0.0	1.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2813)
ABC2_membrane_2	PF12679.2	gi|429217177|ref|YP_007175167.1|	-	0.06	12.1	30.4	0.0039	16.0	15.9	1.9	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
DUF2100	PF09873.4	gi|429217178|ref|YP_007175168.1|	-	0.099	12.0	0.0	0.13	11.6	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2100)
Alba	PF01918.16	gi|429217179|ref|YP_007175169.1|	-	6e-11	41.7	0.0	7.8e-11	41.4	0.0	1.2	1	0	0	1	1	1	1	Alba
SRP54	PF00448.17	gi|429217180|ref|YP_007175170.1|	-	1.2e-70	236.9	0.1	1.9e-70	236.3	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|429217180|ref|YP_007175170.1|	-	9.1e-29	99.7	1.3	2.9e-28	98.1	0.4	2.2	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|429217180|ref|YP_007175170.1|	-	6.8e-15	54.9	1.5	6.8e-15	54.9	1.0	3.0	3	0	0	3	3	3	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|429217180|ref|YP_007175170.1|	-	3.4e-07	29.8	1.4	2.5e-06	27.0	1.0	2.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|429217180|ref|YP_007175170.1|	-	8.7e-06	25.9	0.2	4e-05	23.7	0.0	2.2	3	0	0	3	3	2	1	AAA	domain
MobB	PF03205.9	gi|429217180|ref|YP_007175170.1|	-	1.9e-05	24.3	0.8	9.2e-05	22.1	0.2	2.4	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|429217180|ref|YP_007175170.1|	-	5.1e-05	22.8	0.1	0.0004	19.9	0.1	2.0	2	0	0	2	2	2	1	AAA-like	domain
AAA_17	PF13207.1	gi|429217180|ref|YP_007175170.1|	-	7.9e-05	23.4	1.6	0.00026	21.8	0.0	2.6	3	0	0	3	3	3	1	AAA	domain
cobW	PF02492.14	gi|429217180|ref|YP_007175170.1|	-	0.00022	20.6	0.3	0.00058	19.3	0.2	1.7	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_30	PF13604.1	gi|429217180|ref|YP_007175170.1|	-	0.0012	18.4	0.0	0.0078	15.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|429217180|ref|YP_007175170.1|	-	0.0033	16.2	0.1	0.0083	14.9	0.0	1.6	1	0	0	1	1	1	1	ArgK	protein
AAA_18	PF13238.1	gi|429217180|ref|YP_007175170.1|	-	0.0054	17.0	0.9	0.0054	17.0	0.6	3.0	3	1	0	3	3	3	1	AAA	domain
AAA_33	PF13671.1	gi|429217180|ref|YP_007175170.1|	-	0.0064	16.3	0.0	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|429217180|ref|YP_007175170.1|	-	0.0078	15.3	0.0	0.014	14.4	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
APS_kinase	PF01583.15	gi|429217180|ref|YP_007175170.1|	-	0.008	15.8	0.0	0.016	14.8	0.0	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
MMR_HSR1	PF01926.18	gi|429217180|ref|YP_007175170.1|	-	0.0084	16.0	0.5	0.021	14.8	0.1	1.9	2	0	0	2	2	1	1	50S	ribosome-binding	GTPase
AAA	PF00004.24	gi|429217180|ref|YP_007175170.1|	-	0.015	15.4	0.1	0.078	13.1	0.1	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_31	PF13614.1	gi|429217180|ref|YP_007175170.1|	-	0.02	14.8	0.3	0.12	12.2	0.1	2.4	2	1	1	3	3	3	0	AAA	domain
AAA_5	PF07728.9	gi|429217180|ref|YP_007175170.1|	-	0.029	14.1	0.0	0.073	12.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
KTI12	PF08433.5	gi|429217180|ref|YP_007175170.1|	-	0.029	13.5	0.0	0.069	12.3	0.0	1.6	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
ATP_bind_1	PF03029.12	gi|429217180|ref|YP_007175170.1|	-	0.053	13.0	0.2	0.13	11.8	0.1	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
MipZ	PF09140.6	gi|429217180|ref|YP_007175170.1|	-	0.054	12.5	0.3	2.1	7.3	0.2	2.3	1	1	0	1	1	1	0	ATPase	MipZ
VirC1	PF07015.6	gi|429217180|ref|YP_007175170.1|	-	0.07	12.2	0.1	0.86	8.6	0.0	2.2	2	0	0	2	2	2	0	VirC1	protein
SRPRB	PF09439.5	gi|429217180|ref|YP_007175170.1|	-	0.076	12.2	1.4	5.8	6.0	0.0	2.5	3	0	0	3	3	2	0	Signal	recognition	particle	receptor	beta	subunit
NTPase_1	PF03266.10	gi|429217180|ref|YP_007175170.1|	-	0.088	12.5	1.8	0.93	9.1	1.3	2.3	1	1	0	1	1	1	0	NTPase
AAA_19	PF13245.1	gi|429217180|ref|YP_007175170.1|	-	0.11	12.2	0.1	0.25	11.1	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|429217180|ref|YP_007175170.1|	-	0.13	12.2	0.0	0.3	11.0	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
KaiC	PF06745.8	gi|429217180|ref|YP_007175170.1|	-	0.2	10.7	4.8	0.19	10.8	0.4	2.8	2	2	1	3	3	3	0	KaiC
Peptidase_M28	PF04389.12	gi|429217181|ref|YP_007175171.1|	-	5.7e-14	52.2	0.0	1.2e-13	51.2	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M28
DUF2172	PF09940.4	gi|429217181|ref|YP_007175171.1|	-	4.6e-09	35.1	0.0	8.2e-09	34.3	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2172)
PA	PF02225.17	gi|429217181|ref|YP_007175171.1|	-	0.0011	18.5	0.0	0.0037	16.9	0.0	1.8	2	0	0	2	2	2	1	PA	domain
GHMP_kinases_N	PF00288.21	gi|429217182|ref|YP_007175172.1|	-	5e-15	55.3	1.5	1.1e-14	54.2	1.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|429217182|ref|YP_007175172.1|	-	1.9e-09	37.5	0.1	1.9e-09	37.5	0.1	1.8	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF711	PF05167.7	gi|429217183|ref|YP_007175173.1|	-	2.8e-58	197.5	0.0	3.5e-58	197.2	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
AAA_13	PF13166.1	gi|429217183|ref|YP_007175173.1|	-	0.15	10.4	0.1	0.19	10.1	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
Arylesterase	PF01731.15	gi|429217184|ref|YP_007175174.1|	-	2e-16	59.7	32.9	0.23	11.4	0.1	10.5	2	2	8	10	10	10	8	Arylesterase
Lactonase	PF10282.4	gi|429217184|ref|YP_007175174.1|	-	6.6e-11	41.8	22.7	0.0044	16.1	0.1	7.7	2	1	4	6	6	6	5	Lactonase,	7-bladed	beta-propeller
NHL	PF01436.16	gi|429217184|ref|YP_007175174.1|	-	1.5e-09	37.2	19.0	1.1	9.4	0.0	9.4	10	0	0	10	10	10	2	NHL	repeat
zf-SAP30	PF13866.1	gi|429217184|ref|YP_007175174.1|	-	8.8e-06	25.2	0.1	26	4.5	0.0	6.7	6	2	1	8	8	8	0	SAP30	zinc-finger
SpoIIE	PF07228.7	gi|429217184|ref|YP_007175174.1|	-	7.6e-05	22.4	0.0	6.4	6.4	0.0	5.1	2	2	3	5	5	5	1	Stage	II	sporulation	protein	E	(SpoIIE)
Rifin_STEVOR	PF02009.11	gi|429217184|ref|YP_007175174.1|	-	0.024	14.3	4.8	0.046	13.3	3.4	1.5	1	0	0	1	1	1	0	Rifin/stevor	family
Pex14_N	PF04695.8	gi|429217184|ref|YP_007175174.1|	-	0.27	11.2	6.6	0.6	10.1	4.6	1.6	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
Arch_ATPase	PF01637.13	gi|429217185|ref|YP_007175175.1|	-	2e-41	142.2	6.7	2e-41	142.2	4.6	1.5	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|429217185|ref|YP_007175175.1|	-	1.8e-11	44.0	7.2	1.8e-05	24.6	0.3	2.9	2	1	1	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|429217185|ref|YP_007175175.1|	-	8.4e-07	29.1	0.0	3.4e-06	27.2	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|429217185|ref|YP_007175175.1|	-	3.7e-06	27.0	0.0	3.1e-05	24.0	0.0	2.3	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|429217185|ref|YP_007175175.1|	-	0.00073	19.7	0.1	0.0042	17.2	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_45	PF14947.1	gi|429217185|ref|YP_007175175.1|	-	0.0018	18.0	0.2	0.006	16.3	0.2	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|429217185|ref|YP_007175175.1|	-	0.0031	17.1	0.0	0.0089	15.7	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
AAA_17	PF13207.1	gi|429217185|ref|YP_007175175.1|	-	0.0097	16.7	0.1	0.045	14.5	0.0	2.4	1	1	0	1	1	1	1	AAA	domain
DUF3974	PF13120.1	gi|429217185|ref|YP_007175175.1|	-	0.022	14.5	0.1	0.053	13.3	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3974)
Ferritin	PF00210.19	gi|429217185|ref|YP_007175175.1|	-	0.055	13.2	1.6	0.11	12.1	0.1	2.1	2	0	0	2	2	2	0	Ferritin-like	domain
DUF815	PF05673.8	gi|429217185|ref|YP_007175175.1|	-	0.072	12.0	0.0	0.28	10.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
PadR	PF03551.9	gi|429217185|ref|YP_007175175.1|	-	0.082	12.6	2.1	0.11	12.2	0.0	2.4	3	0	0	3	3	3	0	Transcriptional	regulator	PadR-like	family
DUF1626	PF07788.6	gi|429217186|ref|YP_007175176.1|	-	3.9e-29	100.2	5.1	9.5e-29	99.0	3.5	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1626)
DUF3782	PF12644.2	gi|429217186|ref|YP_007175176.1|	-	7.5e-24	83.3	3.8	1.1e-22	79.5	2.6	2.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3782)
Spc7	PF08317.6	gi|429217186|ref|YP_007175176.1|	-	0.0023	16.6	2.9	0.0023	16.6	2.0	1.7	2	0	0	2	2	2	1	Spc7	kinetochore	protein
Lebercilin	PF15619.1	gi|429217186|ref|YP_007175176.1|	-	0.0057	16.1	0.7	0.0082	15.5	0.5	1.2	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF1664	PF07889.7	gi|429217186|ref|YP_007175176.1|	-	0.044	13.5	2.2	0.38	10.5	1.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
ADIP	PF11559.3	gi|429217186|ref|YP_007175176.1|	-	0.055	13.3	2.0	0.13	12.1	1.4	1.6	1	1	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
DUF2730	PF10805.3	gi|429217186|ref|YP_007175176.1|	-	0.065	12.9	1.1	0.41	10.3	0.7	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
Vac_Fusion	PF02346.11	gi|429217186|ref|YP_007175176.1|	-	0.075	12.4	0.3	1.3	8.5	0.2	2.4	1	1	0	1	1	1	0	Chordopoxvirus	fusion	protein
NPV_P10	PF05531.7	gi|429217186|ref|YP_007175176.1|	-	0.083	13.1	0.8	0.39	11.0	0.6	2.1	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
DUF4143	PF13635.1	gi|429217186|ref|YP_007175176.1|	-	0.23	11.6	1.4	0.41	10.8	1.0	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
Aldo_ket_red	PF00248.16	gi|429217187|ref|YP_007175177.1|	-	6.2e-70	235.2	0.4	7.4e-70	234.9	0.3	1.1	1	0	0	1	1	1	1	Aldo/keto	reductase	family
RTP	PF02334.11	gi|429217187|ref|YP_007175177.1|	-	0.0076	16.2	0.2	3.1	7.7	0.0	2.4	2	0	0	2	2	2	2	Replication	terminator	protein
Enoyl_reductase	PF12241.3	gi|429217187|ref|YP_007175177.1|	-	0.017	14.0	0.1	0.028	13.4	0.1	1.3	1	0	0	1	1	1	0	Trans-2-enoyl-CoA	reductase	catalytic	region
PALP	PF00291.20	gi|429217188|ref|YP_007175178.1|	-	2.6e-70	237.0	0.0	3e-70	236.8	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
HypA	PF01155.14	gi|429217188|ref|YP_007175178.1|	-	0.00042	19.9	0.2	0.00069	19.2	0.1	1.3	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
TF_Zn_Ribbon	PF08271.7	gi|429217188|ref|YP_007175178.1|	-	0.0011	18.2	0.8	0.0021	17.3	0.5	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Prok-RING_1	PF14446.1	gi|429217188|ref|YP_007175178.1|	-	0.0086	15.7	0.8	0.015	15.0	0.6	1.3	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
PK_C	PF02887.11	gi|429217188|ref|YP_007175178.1|	-	0.023	14.2	0.1	0.049	13.1	0.1	1.7	1	1	0	1	1	1	0	Pyruvate	kinase,	alpha/beta	domain
RNA_POL_M_15KD	PF02150.11	gi|429217188|ref|YP_007175178.1|	-	0.055	13.1	0.2	1	9.1	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
NOB1_Zn_bind	PF08772.6	gi|429217188|ref|YP_007175178.1|	-	0.26	11.1	1.0	0.76	9.6	0.7	1.7	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
PhnA_Zn_Ribbon	PF08274.7	gi|429217188|ref|YP_007175178.1|	-	0.72	9.6	2.2	1.8	8.3	1.5	1.6	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-C2HC_2	PF13913.1	gi|429217188|ref|YP_007175178.1|	-	0.93	9.2	3.2	17	5.2	0.1	2.4	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zinc_ribbon_5	PF13719.1	gi|429217188|ref|YP_007175178.1|	-	0.96	9.0	3.5	23	4.6	2.4	2.6	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429217188|ref|YP_007175178.1|	-	1.3	8.7	3.8	30	4.3	2.6	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|429217188|ref|YP_007175178.1|	-	2.7	7.5	5.8	1	8.9	2.0	1.8	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
UDG	PF03167.14	gi|429217189|ref|YP_007175179.1|	-	1.7e-31	108.7	0.0	2.5e-31	108.2	0.0	1.2	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
DSPc	PF00782.15	gi|429217190|ref|YP_007175180.1|	-	9.4e-19	67.3	0.0	1.1e-18	67.0	0.0	1.1	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
Y_phosphatase	PF00102.22	gi|429217190|ref|YP_007175180.1|	-	8.2e-06	25.3	0.0	1.1e-05	24.8	0.0	1.2	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
PTPlike_phytase	PF14566.1	gi|429217190|ref|YP_007175180.1|	-	0.0012	18.8	0.0	0.0018	18.3	0.0	1.3	1	0	0	1	1	1	1	Inositol	hexakisphosphate
CDKN3	PF05706.7	gi|429217190|ref|YP_007175180.1|	-	0.012	15.0	0.1	0.017	14.5	0.0	1.2	1	0	0	1	1	1	0	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase3	PF13350.1	gi|429217190|ref|YP_007175180.1|	-	0.018	15.3	0.0	0.026	14.7	0.0	1.2	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
SSB	PF00436.20	gi|429217190|ref|YP_007175180.1|	-	0.082	12.7	0.0	0.13	12.1	0.0	1.3	1	0	0	1	1	1	0	Single-strand	binding	protein	family
CitG	PF01874.11	gi|429217191|ref|YP_007175181.1|	-	3.8e-21	75.4	0.0	5.3e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
DUF2721	PF11026.3	gi|429217192|ref|YP_007175182.1|	-	0.0017	17.9	0.7	0.0026	17.3	0.5	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
Vps36_ESCRT-II	PF11605.3	gi|429217192|ref|YP_007175182.1|	-	0.0058	16.4	0.1	0.01	15.6	0.1	1.4	1	0	0	1	1	1	1	Vacuolar	protein	sorting	protein	36	Vps36
Ycf1	PF05758.7	gi|429217192|ref|YP_007175182.1|	-	0.11	10.2	1.3	0.15	9.7	0.9	1.2	1	0	0	1	1	1	0	Ycf1
DUF1312	PF07009.6	gi|429217192|ref|YP_007175182.1|	-	1.7	8.4	4.0	1.3	8.8	0.0	2.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1312)
BPL_LplA_LipB	PF03099.14	gi|429217193|ref|YP_007175183.1|	-	4.4e-20	71.9	0.0	7.4e-20	71.2	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|429217194|ref|YP_007175184.1|	-	7.2e-10	38.4	0.4	8.4e-10	38.1	0.2	1.0	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
Biotin_lipoyl	PF00364.17	gi|429217194|ref|YP_007175184.1|	-	0.091	12.4	0.1	0.15	11.7	0.0	1.3	1	0	0	1	1	1	0	Biotin-requiring	enzyme
DNA_binding_1	PF01035.15	gi|429217195|ref|YP_007175185.1|	-	1.9e-21	75.5	0.0	2.3e-21	75.3	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
TusA	PF01206.12	gi|429217196|ref|YP_007175186.1|	-	1.8e-07	30.6	0.0	1.9e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	Sulfurtransferase	TusA
Tme5_EGF_like	PF09064.5	gi|429217196|ref|YP_007175186.1|	-	0.055	13.0	0.1	0.089	12.4	0.1	1.3	1	0	0	1	1	1	0	Thrombomodulin	like	fifth	domain,	EGF-like
Pyr_redox_2	PF07992.9	gi|429217198|ref|YP_007175188.1|	-	2.8e-17	63.2	0.0	5.6e-17	62.2	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429217198|ref|YP_007175188.1|	-	3.1e-10	40.3	1.5	0.00029	21.1	0.3	3.4	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|429217198|ref|YP_007175188.1|	-	4.1e-08	33.5	0.1	0.036	14.1	0.2	3.1	1	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|429217198|ref|YP_007175188.1|	-	2.5e-07	30.5	0.2	6e-07	29.3	0.2	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|429217198|ref|YP_007175188.1|	-	9.7e-05	21.4	1.7	0.0034	16.3	0.3	2.5	2	1	0	3	3	3	1	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|429217198|ref|YP_007175188.1|	-	0.00023	20.7	0.1	0.00055	19.5	0.1	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.13	gi|429217198|ref|YP_007175188.1|	-	0.00069	19.3	0.1	0.0013	18.4	0.1	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.9	gi|429217198|ref|YP_007175188.1|	-	0.002	16.6	0.3	0.0043	15.5	0.2	1.5	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|429217198|ref|YP_007175188.1|	-	0.0024	17.0	0.1	0.0064	15.5	0.1	1.7	1	0	0	1	1	1	1	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|429217198|ref|YP_007175188.1|	-	0.0041	16.0	1.1	0.064	12.0	0.4	2.3	2	0	0	2	2	2	1	FAD	binding	domain
Shikimate_DH	PF01488.15	gi|429217198|ref|YP_007175188.1|	-	0.015	15.3	0.4	1.7	8.7	0.1	2.5	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|429217198|ref|YP_007175188.1|	-	0.026	13.9	1.2	0.52	9.6	0.9	2.4	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Thi4	PF01946.12	gi|429217198|ref|YP_007175188.1|	-	0.039	13.0	0.1	0.065	12.3	0.1	1.3	1	0	0	1	1	1	0	Thi4	family
GIDA	PF01134.17	gi|429217198|ref|YP_007175188.1|	-	0.056	12.2	1.6	0.42	9.4	0.4	2.4	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
DJ-1_PfpI	PF01965.19	gi|429217198|ref|YP_007175188.1|	-	0.061	12.7	0.0	0.14	11.6	0.0	1.6	1	0	0	1	1	1	0	DJ-1/PfpI	family
CoA_binding	PF02629.14	gi|429217198|ref|YP_007175188.1|	-	0.08	13.4	0.3	3.9	8.0	0.2	2.5	1	1	0	1	1	1	0	CoA	binding	domain
2-Hacid_dh_C	PF02826.14	gi|429217198|ref|YP_007175188.1|	-	0.084	12.0	0.2	0.19	10.8	0.1	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429217198|ref|YP_007175188.1|	-	0.13	11.9	0.4	0.39	10.4	0.1	1.9	3	0	0	3	3	3	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_7	PF13241.1	gi|429217198|ref|YP_007175188.1|	-	0.65	10.2	2.5	4.6	7.5	0.2	2.8	2	2	0	2	2	2	0	Putative	NAD(P)-binding
adh_short_C2	PF13561.1	gi|429217199|ref|YP_007175189.1|	-	3.6e-26	92.4	0.0	4.3e-26	92.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|429217199|ref|YP_007175189.1|	-	1.8e-10	41.0	0.0	2.5e-10	40.5	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|429217199|ref|YP_007175189.1|	-	0.0035	17.0	0.0	0.0065	16.1	0.0	1.4	2	0	0	2	2	2	1	KR	domain
NAGLU_N	PF12971.2	gi|429217199|ref|YP_007175189.1|	-	0.17	11.5	0.1	0.41	10.3	0.1	1.6	1	0	0	1	1	1	0	Alpha-N-acetylglucosaminidase	(NAGLU)	N-terminal	domain
Sod_Fe_C	PF02777.13	gi|429217200|ref|YP_007175190.1|	-	3e-39	133.0	0.3	5e-39	132.4	0.1	1.4	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|429217200|ref|YP_007175190.1|	-	3.1e-29	101.0	1.7	6.3e-29	100.0	0.6	1.9	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
ABC_tran	PF00005.22	gi|429217201|ref|YP_007175191.1|	-	2.4e-28	99.1	0.0	3.9e-28	98.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217201|ref|YP_007175191.1|	-	3.1e-16	60.1	9.0	8.9e-16	58.6	3.4	2.6	2	1	0	2	2	1	1	AAA	domain
AAA_15	PF13175.1	gi|429217201|ref|YP_007175191.1|	-	1.7e-14	53.7	10.6	2.2e-11	43.4	0.9	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|429217201|ref|YP_007175191.1|	-	8.4e-09	34.9	0.3	1.2e-08	34.4	0.2	1.3	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|429217201|ref|YP_007175191.1|	-	1.6e-05	24.1	0.0	2.6e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|429217201|ref|YP_007175191.1|	-	3.8e-05	23.5	1.4	0.00066	19.5	0.2	2.4	1	1	1	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|429217201|ref|YP_007175191.1|	-	4.7e-05	23.1	1.6	7.9e-05	22.4	0.8	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|429217201|ref|YP_007175191.1|	-	7.2e-05	22.9	0.1	0.00032	20.8	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|429217201|ref|YP_007175191.1|	-	0.00058	20.2	5.1	0.0014	18.9	3.6	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429217201|ref|YP_007175191.1|	-	0.0021	17.5	0.0	0.0057	16.1	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|429217201|ref|YP_007175191.1|	-	0.0023	17.3	0.0	0.041	13.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|429217201|ref|YP_007175191.1|	-	0.0028	17.3	0.0	0.0063	16.2	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|429217201|ref|YP_007175191.1|	-	0.0032	17.6	2.0	0.028	14.6	1.4	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|429217201|ref|YP_007175191.1|	-	0.0032	17.1	0.0	0.0058	16.3	0.0	1.3	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|429217201|ref|YP_007175191.1|	-	0.0037	17.2	0.0	0.019	14.9	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|429217201|ref|YP_007175191.1|	-	0.0044	16.5	0.4	0.2	11.0	0.1	2.1	1	1	0	2	2	2	1	AAA-like	domain
NACHT	PF05729.7	gi|429217201|ref|YP_007175191.1|	-	0.0046	16.6	0.0	0.011	15.4	0.0	1.6	2	0	0	2	2	2	1	NACHT	domain
AAA_5	PF07728.9	gi|429217201|ref|YP_007175191.1|	-	0.007	16.1	0.2	0.042	13.5	0.1	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|429217201|ref|YP_007175191.1|	-	0.0097	16.7	0.6	0.021	15.6	0.4	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|429217201|ref|YP_007175191.1|	-	0.014	15.6	0.3	0.044	14.1	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|429217201|ref|YP_007175191.1|	-	0.016	14.1	0.0	0.026	13.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.17	gi|429217201|ref|YP_007175191.1|	-	0.025	13.4	1.0	0.065	12.0	0.0	2.0	2	1	1	3	3	3	0	NB-ARC	domain
PhoH	PF02562.11	gi|429217201|ref|YP_007175191.1|	-	0.027	13.6	0.0	0.047	12.9	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
PIF1	PF05970.9	gi|429217201|ref|YP_007175191.1|	-	0.036	13.0	0.1	0.13	11.1	0.0	1.9	2	0	0	2	2	2	0	PIF1-like	helicase
SbcCD_C	PF13558.1	gi|429217201|ref|YP_007175191.1|	-	0.039	13.8	0.1	0.33	10.9	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
UPF0079	PF02367.12	gi|429217201|ref|YP_007175191.1|	-	0.047	13.3	0.1	0.1	12.2	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Thymidylate_kin	PF02223.12	gi|429217201|ref|YP_007175191.1|	-	0.047	13.0	0.0	0.14	11.4	0.0	1.8	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_28	PF13521.1	gi|429217201|ref|YP_007175191.1|	-	0.06	13.3	0.0	0.086	12.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|429217201|ref|YP_007175191.1|	-	0.076	12.5	1.9	0.16	11.5	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_11	PF13086.1	gi|429217201|ref|YP_007175191.1|	-	0.081	12.4	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|429217201|ref|YP_007175191.1|	-	0.099	12.0	0.3	0.17	11.2	0.2	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|429217201|ref|YP_007175191.1|	-	0.11	12.1	0.8	0.39	10.4	0.3	1.9	2	0	0	2	2	2	0	NTPase
AAA_30	PF13604.1	gi|429217201|ref|YP_007175191.1|	-	0.11	12.0	0.0	0.18	11.3	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
FecCD	PF01032.13	gi|429217202|ref|YP_007175192.1|	-	2.6e-75	253.1	38.3	3.2e-75	252.8	26.5	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|429217202|ref|YP_007175192.1|	-	0.00016	21.0	26.6	0.00016	21.0	18.4	1.7	2	0	0	2	2	2	1	ABC	3	transport	family
Peripla_BP_2	PF01497.13	gi|429217203|ref|YP_007175193.1|	-	6.7e-32	110.5	0.1	2.2e-31	108.8	0.0	1.8	2	0	0	2	2	2	1	Periplasmic	binding	protein
Syntaxin-6_N	PF09177.6	gi|429217203|ref|YP_007175193.1|	-	0.025	14.9	1.2	0.12	12.8	0.8	2.1	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
SF-assemblin	PF06705.6	gi|429217203|ref|YP_007175193.1|	-	0.039	13.0	2.9	0.061	12.4	2.0	1.2	1	0	0	1	1	1	0	SF-assemblin/beta	giardin
Spore_III_AB	PF09548.5	gi|429217203|ref|YP_007175193.1|	-	0.049	13.3	4.9	0.37	10.5	3.7	2.1	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
UPF0118	PF01594.11	gi|429217203|ref|YP_007175193.1|	-	0.051	12.5	6.9	0.11	11.4	4.8	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF20
PhoU	PF01895.14	gi|429217203|ref|YP_007175193.1|	-	0.06	13.8	0.2	0.18	12.2	0.1	1.9	1	1	0	1	1	1	0	PhoU	domain
PRKCSH-like	PF12999.2	gi|429217203|ref|YP_007175193.1|	-	0.078	12.5	0.5	6.6	6.2	0.0	2.3	2	0	0	2	2	2	0	Glucosidase	II	beta	subunit-like
Syntaxin	PF00804.20	gi|429217203|ref|YP_007175193.1|	-	0.084	13.0	3.6	0.18	11.9	2.5	1.5	1	0	0	1	1	1	0	Syntaxin
Reo_sigmaC	PF04582.7	gi|429217203|ref|YP_007175193.1|	-	0.091	11.9	10.2	0.051	12.7	3.8	2.6	3	1	0	3	3	3	0	Reovirus	sigma	C	capsid	protein
TMP_2	PF06791.8	gi|429217203|ref|YP_007175193.1|	-	0.096	12.2	0.2	0.17	11.4	0.2	1.4	1	0	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
MIS13	PF08202.6	gi|429217203|ref|YP_007175193.1|	-	0.1	11.6	2.4	0.15	11.1	1.7	1.2	1	0	0	1	1	1	0	Mis12-Mtw1	protein	family
BLOC1_2	PF10046.4	gi|429217203|ref|YP_007175193.1|	-	0.11	12.6	10.1	0.52	10.4	6.4	2.4	2	1	0	2	2	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
HsbA	PF12296.3	gi|429217203|ref|YP_007175193.1|	-	0.13	12.1	5.7	0.067	13.0	1.6	2.2	1	1	1	2	2	2	0	Hydrophobic	surface	binding	protein	A
ACCA	PF03255.9	gi|429217203|ref|YP_007175193.1|	-	0.15	11.5	0.4	0.35	10.3	0.1	1.7	1	1	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
HSBP1	PF06825.7	gi|429217203|ref|YP_007175193.1|	-	0.17	11.4	1.0	13	5.4	0.0	2.6	2	0	0	2	2	2	0	Heat	shock	factor	binding	protein	1
L27_2	PF09045.5	gi|429217203|ref|YP_007175193.1|	-	0.51	9.9	4.4	4.6	6.8	3.1	2.3	1	1	0	1	1	1	0	L27_2
TarH	PF02203.10	gi|429217203|ref|YP_007175193.1|	-	0.52	10.1	5.5	1.2	8.8	3.8	1.7	1	1	0	1	1	1	0	Tar	ligand	binding	domain	homologue
NPV_P10	PF05531.7	gi|429217203|ref|YP_007175193.1|	-	0.74	10.1	6.7	10	6.4	1.0	2.8	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF603	PF04645.7	gi|429217203|ref|YP_007175193.1|	-	1.2	9.0	6.5	1.4	8.8	0.9	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF603
FliD_N	PF02465.13	gi|429217203|ref|YP_007175193.1|	-	1.5	9.2	7.4	5.9	7.3	1.9	2.6	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
TMF_DNA_bd	PF12329.3	gi|429217203|ref|YP_007175193.1|	-	5	6.9	8.1	5.6	6.8	2.9	2.2	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
IF-2B	PF01008.12	gi|429217204|ref|YP_007175194.1|	-	2.5e-33	115.3	0.2	3.9e-33	114.6	0.2	1.4	1	1	0	1	1	1	1	Initiation	factor	2	subunit	family
OMPdecase	PF00215.19	gi|429217205|ref|YP_007175195.1|	-	3.1e-29	101.9	0.0	4e-29	101.6	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Pribosyltran	PF00156.22	gi|429217206|ref|YP_007175196.1|	-	1.9e-14	53.4	0.3	4e-14	52.4	0.2	1.6	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
NblA	PF04485.7	gi|429217206|ref|YP_007175196.1|	-	0.11	12.3	1.7	0.23	11.3	0.6	2.0	2	0	0	2	2	2	0	Phycobilisome	degradation	protein	nblA
OTCace_N	PF02729.16	gi|429217207|ref|YP_007175197.1|	-	8.8e-42	142.1	0.0	1.3e-41	141.6	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|429217207|ref|YP_007175197.1|	-	1.6e-34	119.1	0.0	2.8e-34	118.2	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
PyrI	PF01948.13	gi|429217208|ref|YP_007175198.1|	-	8.7e-36	121.8	4.4	8.7e-36	121.8	2.3	1.5	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|429217208|ref|YP_007175198.1|	-	1e-19	69.6	1.1	1.6e-19	69.0	0.8	1.3	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Arc_trans_TRASH	PF08394.5	gi|429217208|ref|YP_007175198.1|	-	0.032	14.3	0.7	0.081	13.0	0.5	1.7	1	0	0	1	1	1	0	Archaeal	TRASH	domain
Amidohydro_1	PF01979.15	gi|429217209|ref|YP_007175199.1|	-	8e-19	68.4	0.0	1.4e-18	67.6	0.0	1.4	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|429217209|ref|YP_007175199.1|	-	1.9e-13	51.0	0.0	2e-11	44.4	0.0	2.5	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|429217209|ref|YP_007175199.1|	-	2.7e-06	27.0	0.0	7e-06	25.7	0.0	1.6	1	0	0	1	1	1	1	Amidohydrolase
CDP-OH_P_transf	PF01066.16	gi|429217210|ref|YP_007175200.1|	-	6.6e-16	58.4	15.3	2.2e-15	56.7	9.5	2.0	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
RDD	PF06271.7	gi|429217210|ref|YP_007175200.1|	-	9.9	6.0	11.3	8.7	6.2	5.6	2.1	1	1	1	2	2	2	0	RDD	family
adh_short	PF00106.20	gi|429217211|ref|YP_007175201.1|	-	7.9e-35	120.2	0.0	9.8e-35	119.9	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|429217211|ref|YP_007175201.1|	-	1.7e-27	96.7	0.1	2.1e-27	96.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|429217211|ref|YP_007175201.1|	-	1.8e-17	63.5	0.0	4.6e-17	62.2	0.0	1.6	1	1	1	2	2	2	1	KR	domain
DUF1776	PF08643.5	gi|429217211|ref|YP_007175201.1|	-	0.0018	17.5	0.0	0.0064	15.6	0.0	1.8	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|429217211|ref|YP_007175201.1|	-	0.0018	17.7	0.1	0.0029	17.0	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|429217211|ref|YP_007175201.1|	-	0.095	11.5	0.2	0.14	11.0	0.0	1.4	2	0	0	2	2	2	0	Polysaccharide	biosynthesis	protein
ACT	PF01842.20	gi|429217211|ref|YP_007175201.1|	-	0.13	11.7	0.1	6.1	6.4	0.0	2.6	2	0	0	2	2	2	0	ACT	domain
ADH_N	PF08240.7	gi|429217212|ref|YP_007175202.1|	-	4.3e-16	58.6	0.1	7.4e-15	54.6	0.0	2.4	1	1	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|429217212|ref|YP_007175202.1|	-	4.9e-16	58.4	0.0	8.3e-16	57.7	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|429217212|ref|YP_007175202.1|	-	8.7e-08	33.1	0.0	1.7e-07	32.1	0.0	1.4	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|429217212|ref|YP_007175202.1|	-	0.0016	18.4	0.0	0.005	16.8	0.0	1.7	1	1	1	2	2	2	1	NADH(P)-binding
TauE	PF01925.14	gi|429217213|ref|YP_007175203.1|	-	4.7e-45	153.9	40.8	5.3e-45	153.7	28.3	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF1304	PF06993.7	gi|429217213|ref|YP_007175203.1|	-	0.13	12.0	6.1	0.078	12.6	0.4	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1304)
Herpes_LAMP2	PF06126.6	gi|429217213|ref|YP_007175203.1|	-	0.17	10.2	5.9	0.26	9.6	4.1	1.2	1	0	0	1	1	1	0	Herpesvirus	Latent	membrane	protein	2
Inos-1-P_synth	PF01658.12	gi|429217214|ref|YP_007175204.1|	-	6.3e-25	87.1	0.0	1.3e-24	86.2	0.0	1.5	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
NAD_binding_5	PF07994.7	gi|429217214|ref|YP_007175204.1|	-	5.5e-24	85.1	0.0	8.8e-24	84.5	0.0	1.3	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
LSM	PF01423.17	gi|429217215|ref|YP_007175205.1|	-	4e-17	61.5	0.3	4.8e-17	61.2	0.2	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|429217215|ref|YP_007175205.1|	-	0.00038	20.3	0.0	0.0005	19.9	0.0	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
DUF2208	PF09973.4	gi|429217216|ref|YP_007175206.1|	-	3.6e-49	167.0	12.7	4.2e-49	166.8	8.8	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
DUF1469	PF07332.6	gi|429217216|ref|YP_007175206.1|	-	0.02	14.6	1.0	0.37	10.5	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
Colicin_V	PF02674.11	gi|429217216|ref|YP_007175206.1|	-	0.093	12.5	13.6	0.053	13.3	1.8	2.2	2	0	0	2	2	2	0	Colicin	V	production	protein
DUF1673	PF07895.6	gi|429217216|ref|YP_007175206.1|	-	1.8	8.0	10.1	2.7	7.4	7.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
Amidohydro_1	PF01979.15	gi|429217217|ref|YP_007175207.1|	-	0.00032	20.4	0.0	0.0025	17.5	0.0	1.9	1	1	0	2	2	2	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|429217217|ref|YP_007175207.1|	-	0.026	14.5	0.0	0.038	14.0	0.0	1.2	1	0	0	1	1	1	0	Amidohydrolase
SCP2	PF02036.12	gi|429217218|ref|YP_007175208.1|	-	6.6e-16	58.4	0.0	7.8e-16	58.2	0.0	1.1	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
Alkyl_sulf_C	PF14864.1	gi|429217218|ref|YP_007175208.1|	-	0.00014	21.8	0.0	0.00017	21.5	0.0	1.1	1	0	0	1	1	1	1	Alkyl	sulfatase	C-terminal
Thiolase_N	PF00108.18	gi|429217219|ref|YP_007175209.1|	-	8e-14	51.2	2.0	5.9e-12	45.1	0.0	2.4	3	0	0	3	3	3	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|429217219|ref|YP_007175209.1|	-	3.2e-08	33.0	0.3	1.4e-07	30.9	0.1	2.1	1	1	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|429217219|ref|YP_007175209.1|	-	2.6e-06	27.0	1.4	7.7e-06	25.5	0.6	2.1	1	1	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|429217219|ref|YP_007175209.1|	-	0.0016	18.0	0.2	0.02	14.5	0.1	2.3	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
DUF35	PF01796.12	gi|429217220|ref|YP_007175210.1|	-	3.9e-12	46.2	0.0	5.6e-12	45.7	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|429217220|ref|YP_007175210.1|	-	3.2e-07	30.0	0.0	5.3e-07	29.3	0.0	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HlyD_3	PF13437.1	gi|429217220|ref|YP_007175210.1|	-	0.076	13.3	0.0	2.9	8.2	0.0	2.2	2	0	0	2	2	2	0	HlyD	family	secretion	protein
PfkB	PF00294.19	gi|429217221|ref|YP_007175211.1|	-	8.4e-52	176.1	0.0	1e-51	175.8	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|429217221|ref|YP_007175211.1|	-	2e-05	23.9	0.0	2.9e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
DeoC	PF01791.4	gi|429217222|ref|YP_007175212.1|	-	1.1e-34	119.7	0.0	1.4e-34	119.4	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Peptidase_C26	PF07722.8	gi|429217222|ref|YP_007175212.1|	-	0.04	13.3	0.2	0.95	8.8	0.1	2.1	2	0	0	2	2	2	0	Peptidase	C26
DUF561	PF04481.7	gi|429217222|ref|YP_007175212.1|	-	0.095	11.6	0.2	0.2	10.5	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
Flavoprotein	PF02441.14	gi|429217223|ref|YP_007175213.1|	-	2.1e-24	85.6	0.1	2.7e-24	85.2	0.0	1.1	1	0	0	1	1	1	1	Flavoprotein
tRNA_int_endo	PF01974.12	gi|429217225|ref|YP_007175215.1|	-	1.9e-22	78.8	0.1	3e-22	78.1	0.0	1.3	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|429217225|ref|YP_007175215.1|	-	6.7e-13	47.9	0.0	1.4e-12	46.9	0.0	1.6	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA_int_end_N2	PF12928.2	gi|429217225|ref|YP_007175215.1|	-	0.0058	16.0	0.0	0.01	15.2	0.0	1.4	1	0	0	1	1	1	1	tRNA-splicing	endonuclease	subunit	sen54	N-term
TetR_C_8	PF14278.1	gi|429217226|ref|YP_007175216.1|	-	0.0012	19.2	2.2	0.012	15.9	0.5	2.7	3	0	0	3	3	3	1	Transcriptional	regulator	C-terminal	region
Glyphos_transf	PF04464.9	gi|429217226|ref|YP_007175216.1|	-	0.015	14.1	0.1	0.031	13.0	0.0	1.5	2	0	0	2	2	2	0	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
Fib_alpha	PF08702.5	gi|429217226|ref|YP_007175216.1|	-	0.022	14.8	1.6	0.96	9.5	0.0	2.2	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
UCH	PF00443.24	gi|429217226|ref|YP_007175216.1|	-	0.12	11.4	0.4	2.8	6.9	0.1	2.1	2	0	0	2	2	2	0	Ubiquitin	carboxyl-terminal	hydrolase
Cobalamin_bind	PF01122.14	gi|429217226|ref|YP_007175216.1|	-	0.13	10.8	0.5	0.26	9.8	0.0	1.7	2	0	0	2	2	2	0	Eukaryotic	cobalamin-binding	protein
P5CR_dimer	PF14748.1	gi|429217227|ref|YP_007175217.1|	-	3.2e-30	104.2	0.0	4.8e-30	103.7	0.0	1.3	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.12	gi|429217227|ref|YP_007175217.1|	-	1.3e-17	63.9	1.4	3.1e-17	62.7	1.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
PDH	PF02153.12	gi|429217227|ref|YP_007175217.1|	-	4.9e-05	22.3	0.1	7.8e-05	21.6	0.0	1.3	1	0	0	1	1	1	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.10	gi|429217227|ref|YP_007175217.1|	-	0.00015	21.6	0.0	0.00027	20.8	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|429217227|ref|YP_007175217.1|	-	0.00078	18.6	0.0	0.0011	18.1	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|429217227|ref|YP_007175217.1|	-	0.0016	18.4	0.1	0.006	16.5	0.1	2.0	1	1	0	1	1	1	1	TrkA-N	domain
ApbA	PF02558.11	gi|429217227|ref|YP_007175217.1|	-	0.0016	17.8	0.1	0.0029	17.0	0.1	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|429217227|ref|YP_007175217.1|	-	0.01	15.5	2.0	0.095	12.4	1.3	2.3	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
GFO_IDH_MocA	PF01408.17	gi|429217227|ref|YP_007175217.1|	-	0.028	14.9	0.0	0.1	13.1	0.0	1.8	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_7	PF13241.1	gi|429217227|ref|YP_007175217.1|	-	0.046	13.9	0.2	0.086	13.1	0.1	1.7	1	1	0	1	1	1	0	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|429217227|ref|YP_007175217.1|	-	0.047	13.3	0.0	0.081	12.5	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NmrA	PF05368.8	gi|429217227|ref|YP_007175217.1|	-	0.12	11.6	0.1	0.16	11.2	0.0	1.4	1	1	0	1	1	1	0	NmrA-like	family
ADH_zinc_N	PF00107.21	gi|429217227|ref|YP_007175217.1|	-	0.12	11.9	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
3Beta_HSD	PF01073.14	gi|429217227|ref|YP_007175217.1|	-	0.14	10.8	0.1	0.39	9.3	0.0	1.7	2	0	0	2	2	2	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
ATP_bind_1	PF03029.12	gi|429217228|ref|YP_007175218.1|	-	5.5e-51	173.4	0.0	6.3e-51	173.2	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
CbiA	PF01656.18	gi|429217228|ref|YP_007175218.1|	-	4.5e-06	26.1	0.3	9.6e-06	25.1	0.1	1.7	1	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_17	PF13207.1	gi|429217228|ref|YP_007175218.1|	-	0.0001	23.1	0.1	0.00023	21.9	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|429217228|ref|YP_007175218.1|	-	0.00062	18.6	0.0	0.00088	18.1	0.0	1.2	1	0	0	1	1	1	1	ArgK	protein
Zeta_toxin	PF06414.7	gi|429217228|ref|YP_007175218.1|	-	0.0013	17.8	0.0	0.0088	15.1	0.0	2.1	2	0	0	2	2	2	1	Zeta	toxin
AAA_18	PF13238.1	gi|429217228|ref|YP_007175218.1|	-	0.0014	18.9	0.0	0.0033	17.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
PduV-EutP	PF10662.4	gi|429217228|ref|YP_007175218.1|	-	0.0021	17.5	0.5	1.5	8.3	0.0	2.6	2	1	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_30	PF13604.1	gi|429217228|ref|YP_007175218.1|	-	0.0026	17.3	0.0	0.0037	16.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|429217228|ref|YP_007175218.1|	-	0.0027	17.1	0.1	0.021	14.2	0.0	2.0	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.18	gi|429217228|ref|YP_007175218.1|	-	0.0031	17.4	0.0	0.0079	16.1	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|429217228|ref|YP_007175218.1|	-	0.0031	17.5	0.0	0.014	15.3	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
Gtr1_RagA	PF04670.7	gi|429217228|ref|YP_007175218.1|	-	0.0072	15.4	0.1	0.097	11.7	0.0	2.1	2	0	0	2	2	2	1	Gtr1/RagA	G	protein	conserved	region
GTP_EFTU	PF00009.22	gi|429217228|ref|YP_007175218.1|	-	0.0075	15.7	0.1	0.051	12.9	0.1	2.1	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
KTI12	PF08433.5	gi|429217228|ref|YP_007175218.1|	-	0.009	15.2	0.0	0.025	13.8	0.0	1.7	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
ABC_tran	PF00005.22	gi|429217228|ref|YP_007175218.1|	-	0.0091	16.3	0.0	0.017	15.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
DUF258	PF03193.11	gi|429217228|ref|YP_007175218.1|	-	0.023	13.8	0.0	0.21	10.7	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_24	PF13479.1	gi|429217228|ref|YP_007175218.1|	-	0.025	14.1	0.0	0.04	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|429217228|ref|YP_007175218.1|	-	0.03	13.7	0.0	0.064	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA-like	domain
NTPase_1	PF03266.10	gi|429217228|ref|YP_007175218.1|	-	0.041	13.5	0.1	5.8	6.5	0.1	2.4	2	0	0	2	2	2	0	NTPase
FeoB_N	PF02421.13	gi|429217228|ref|YP_007175218.1|	-	0.055	12.7	0.1	1.2	8.4	0.0	2.2	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|429217228|ref|YP_007175218.1|	-	0.061	13.1	0.3	2.5	7.9	0.0	2.2	2	0	0	2	2	2	0	Dynamin	family
NOG1	PF06858.9	gi|429217228|ref|YP_007175218.1|	-	0.064	13.1	0.6	0.28	11.0	0.4	2.1	1	1	0	1	1	1	0	Nucleolar	GTP-binding	protein	1	(NOG1)
AAA_5	PF07728.9	gi|429217228|ref|YP_007175218.1|	-	0.068	12.8	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_PrkA	PF08298.6	gi|429217228|ref|YP_007175218.1|	-	0.079	11.6	0.0	0.11	11.1	0.0	1.2	1	0	0	1	1	1	0	PrkA	AAA	domain
AAA_28	PF13521.1	gi|429217228|ref|YP_007175218.1|	-	0.11	12.4	0.0	0.17	11.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|429217228|ref|YP_007175218.1|	-	0.13	11.8	0.0	0.26	10.8	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
APS_kinase	PF01583.15	gi|429217228|ref|YP_007175218.1|	-	0.13	11.9	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
DUF162	PF02589.10	gi|429217229|ref|YP_007175219.1|	-	6.8e-50	169.2	0.0	9.2e-50	168.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|429217229|ref|YP_007175219.1|	-	3.1e-09	36.7	3.7	4.9e-09	36.0	2.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|429217229|ref|YP_007175219.1|	-	4e-08	32.9	4.5	7.5e-08	32.0	3.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|429217229|ref|YP_007175219.1|	-	1.3e-07	31.8	3.6	0.004	17.5	0.3	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|429217229|ref|YP_007175219.1|	-	5.7e-06	25.6	10.3	0.0017	17.8	0.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|429217229|ref|YP_007175219.1|	-	6e-06	26.5	2.1	1.4e-05	25.3	1.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|429217229|ref|YP_007175219.1|	-	6.7e-06	26.3	5.2	1.3e-05	25.5	3.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217229|ref|YP_007175219.1|	-	9.3e-06	25.8	7.7	6.1e-05	23.2	5.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|429217229|ref|YP_007175219.1|	-	1.7e-05	24.4	9.3	0.003	17.3	0.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|429217229|ref|YP_007175219.1|	-	0.00041	20.4	11.4	0.018	15.3	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|429217229|ref|YP_007175219.1|	-	0.00085	19.1	10.8	0.025	14.4	7.7	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217229|ref|YP_007175219.1|	-	0.018	14.8	11.3	0.45	10.4	1.7	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|429217229|ref|YP_007175219.1|	-	0.025	14.1	3.0	0.89	9.2	0.1	2.4	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.1	gi|429217229|ref|YP_007175219.1|	-	0.047	14.4	8.5	0.52	11.1	1.0	2.2	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Gifsy-2	PF13856.1	gi|429217229|ref|YP_007175219.1|	-	0.063	13.4	0.0	0.12	12.5	0.0	1.4	1	0	0	1	1	1	0	ATP-binding	sugar	transporter	from	pro-phage
CTK3	PF12243.3	gi|429217229|ref|YP_007175219.1|	-	0.074	12.6	0.4	0.16	11.5	0.3	1.6	1	0	0	1	1	1	0	CTD	kinase	subunit	gamma	CTK3
Fer4_3	PF12798.2	gi|429217229|ref|YP_007175219.1|	-	0.14	12.7	15.2	1.8	9.3	2.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CCG	PF02754.11	gi|429217230|ref|YP_007175220.1|	-	2.9e-09	36.8	0.0	1e-06	28.6	0.0	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
LUC7	PF03194.10	gi|429217231|ref|YP_007175221.1|	-	0.001	18.6	5.6	0.0011	18.5	3.8	1.1	1	0	0	1	1	1	1	LUC7	N_terminus
Phasin	PF05597.6	gi|429217231|ref|YP_007175221.1|	-	0.0022	17.7	4.6	0.18	11.5	0.7	3.3	2	1	1	3	3	3	1	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Fmp27_WPPW	PF10359.4	gi|429217231|ref|YP_007175221.1|	-	0.0089	14.4	2.2	0.011	14.1	1.5	1.2	1	0	0	1	1	1	1	RNA	pol	II	promoter	Fmp27	protein	domain
DUF1778	PF08681.6	gi|429217231|ref|YP_007175221.1|	-	0.022	14.5	0.1	3.5	7.5	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1778)
HSBP1	PF06825.7	gi|429217231|ref|YP_007175221.1|	-	0.047	13.2	2.3	0.16	11.5	1.6	1.9	1	1	0	1	1	1	0	Heat	shock	factor	binding	protein	1
Exonuc_VII_L	PF02601.10	gi|429217231|ref|YP_007175221.1|	-	0.048	12.8	3.0	0.062	12.4	2.1	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Rad9	PF04139.8	gi|429217231|ref|YP_007175221.1|	-	0.058	12.4	1.3	0.096	11.7	0.9	1.3	1	0	0	1	1	1	0	Rad9
DUF2422	PF10337.4	gi|429217231|ref|YP_007175221.1|	-	0.4	9.4	1.3	0.49	9.1	0.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2422)
HD_4	PF13328.1	gi|429217231|ref|YP_007175221.1|	-	0.42	10.3	2.2	13	5.5	0.1	2.3	1	1	1	2	2	2	0	HD	domain
Med2	PF11214.3	gi|429217231|ref|YP_007175221.1|	-	0.47	10.5	7.9	0.86	9.6	5.5	1.5	1	0	0	1	1	1	0	Mediator	complex	subunit	2
Mitovir_RNA_pol	PF05919.6	gi|429217231|ref|YP_007175221.1|	-	0.59	9.0	3.8	0.77	8.6	2.6	1.1	1	0	0	1	1	1	0	Mitovirus	RNA-dependent	RNA	polymerase
Cep57_CLD_2	PF14197.1	gi|429217231|ref|YP_007175221.1|	-	0.87	9.5	9.2	2.2	8.2	6.4	1.6	1	0	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
HXXSHH	PF07586.6	gi|429217231|ref|YP_007175221.1|	-	1.4	7.8	3.1	1.8	7.3	2.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1552)
DUF2203	PF09969.4	gi|429217231|ref|YP_007175221.1|	-	2.1	8.5	6.4	1.3	9.2	1.4	2.2	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
DUF2521	PF10730.4	gi|429217231|ref|YP_007175221.1|	-	4.9	6.9	6.7	8.7	6.1	0.9	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2521)
RHH_1	PF01402.16	gi|429217231|ref|YP_007175221.1|	-	5.8	6.9	7.1	0.66	9.9	0.2	3.0	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
IncA	PF04156.9	gi|429217231|ref|YP_007175221.1|	-	6.2	6.3	11.3	16	5.0	7.8	1.6	1	1	0	1	1	1	0	IncA	protein
VIT1	PF01988.14	gi|429217233|ref|YP_007175223.1|	-	2.2e-15	56.7	24.3	1.6e-09	37.6	4.6	2.3	1	1	1	2	2	2	2	VIT	family
Rubrerythrin	PF02915.12	gi|429217233|ref|YP_007175223.1|	-	2.5e-09	37.5	0.7	5e-09	36.5	0.5	1.4	1	0	0	1	1	1	1	Rubrerythrin
Bac_small_YrzI	PF09501.5	gi|429217233|ref|YP_007175223.1|	-	6.2	6.8	7.0	2.3	8.2	0.7	2.8	2	1	1	3	3	3	0	Probable	sporulation	protein	(Bac_small_yrzI)
Peptidase_S9	PF00326.16	gi|429217234|ref|YP_007175224.1|	-	4.3e-49	166.6	0.1	6.5e-49	166.0	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
PD40	PF07676.7	gi|429217234|ref|YP_007175224.1|	-	3.5e-10	39.3	1.3	0.1	12.2	0.1	5.5	5	0	0	5	5	5	3	WD40-like	Beta	Propeller	Repeat
Abhydrolase_5	PF12695.2	gi|429217234|ref|YP_007175224.1|	-	6.3e-10	38.9	0.0	1.1e-09	38.2	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|429217234|ref|YP_007175224.1|	-	5.5e-06	25.8	0.0	1e-05	24.9	0.0	1.4	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
DPPIV_N	PF00930.16	gi|429217234|ref|YP_007175224.1|	-	3.5e-05	22.5	5.0	0.65	8.5	0.1	4.7	2	2	3	5	5	5	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Abhydrolase_6	PF12697.2	gi|429217234|ref|YP_007175224.1|	-	0.00028	20.8	0.0	0.0034	17.3	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
AXE1	PF05448.7	gi|429217234|ref|YP_007175224.1|	-	0.00087	17.8	0.1	0.3	9.5	0.1	3.1	2	1	0	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
DUF2920	PF11144.3	gi|429217234|ref|YP_007175224.1|	-	0.002	17.2	0.3	1.9	7.4	0.1	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2920)
eIF2A	PF08662.6	gi|429217234|ref|YP_007175224.1|	-	0.0044	16.7	2.7	7.6	6.1	0.1	3.9	3	1	1	4	4	4	1	Eukaryotic	translation	initiation	factor	eIF2A
WD40	PF00400.27	gi|429217234|ref|YP_007175224.1|	-	0.031	14.1	0.0	7.5	6.6	0.0	2.9	3	0	0	3	3	3	0	WD	domain,	G-beta	repeat
Gmad1	PF10647.4	gi|429217234|ref|YP_007175224.1|	-	0.065	12.6	0.0	5.6	6.2	0.0	2.9	3	0	0	3	3	3	0	Lipoprotein	LpqB	beta-propeller	domain
Cytokin_check_N	PF10407.4	gi|429217234|ref|YP_007175224.1|	-	0.082	12.5	0.5	1	9.0	0.1	2.5	1	1	1	2	2	2	0	Cdc14	phosphatase	binding	protein	N-terminus
Peptidase_M1	PF01433.15	gi|429217235|ref|YP_007175225.1|	-	1e-106	357.3	1.0	1.3e-106	356.9	0.2	1.5	2	0	0	2	2	2	1	Peptidase	family	M1
Peptidase_MA_2	PF13485.1	gi|429217235|ref|YP_007175225.1|	-	2.9e-18	66.1	0.1	6.2e-18	65.0	0.1	1.6	1	0	0	1	1	1	1	Peptidase	MA	superfamily
ERAP1_C	PF11838.3	gi|429217235|ref|YP_007175225.1|	-	2.2e-16	60.0	2.0	9.2e-16	57.9	1.4	1.9	1	1	0	1	1	1	1	ERAP1-like	C-terminal	domain
ATP-sulfurylase	PF01747.12	gi|429217238|ref|YP_007175228.1|	-	1.6e-83	279.2	0.0	2.2e-83	278.8	0.0	1.2	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|429217238|ref|YP_007175228.1|	-	1.8e-50	170.4	0.0	6.9e-50	168.5	0.0	1.8	2	0	0	2	2	2	1	PUA-like	domain
Fibrinogen_BP	PF08017.6	gi|429217238|ref|YP_007175228.1|	-	0.09	10.9	0.0	0.13	10.4	0.0	1.1	1	0	0	1	1	1	0	Fibrinogen	binding	protein
RHH_1	PF01402.16	gi|429217239|ref|YP_007175229.1|	-	0.0065	16.3	0.0	0.069	13.0	0.0	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
HTH_22	PF13309.1	gi|429217239|ref|YP_007175229.1|	-	0.091	12.5	0.1	0.15	11.8	0.1	1.4	1	0	0	1	1	1	0	HTH	domain
DUF3408	PF11888.3	gi|429217239|ref|YP_007175229.1|	-	0.092	12.6	1.5	0.16	11.8	0.6	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3408)
DUF965	PF06135.7	gi|429217239|ref|YP_007175229.1|	-	0.11	12.5	0.1	0.12	12.4	0.1	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF965)
APS_kinase	PF01583.15	gi|429217240|ref|YP_007175230.1|	-	2.2e-56	189.8	0.0	2.5e-56	189.6	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_18	PF13238.1	gi|429217240|ref|YP_007175230.1|	-	1.2e-08	35.2	1.2	1.5e-08	35.0	0.3	1.5	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|429217240|ref|YP_007175230.1|	-	6.9e-08	32.4	0.0	9.3e-08	32.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|429217240|ref|YP_007175230.1|	-	2.6e-07	30.1	0.1	3.2e-07	29.8	0.1	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_17	PF13207.1	gi|429217240|ref|YP_007175230.1|	-	3.7e-06	27.7	1.2	6.2e-06	27.0	0.3	1.7	1	1	1	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|429217240|ref|YP_007175230.1|	-	8e-05	21.8	0.0	0.00013	21.1	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
SRP54	PF00448.17	gi|429217240|ref|YP_007175230.1|	-	0.00055	19.4	0.0	0.00085	18.8	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.12	gi|429217240|ref|YP_007175230.1|	-	0.00058	19.2	1.4	0.0029	16.9	0.1	2.3	2	1	1	3	3	3	1	Thymidylate	kinase
Cytidylate_kin2	PF13189.1	gi|429217240|ref|YP_007175230.1|	-	0.00074	19.4	0.3	0.014	15.2	0.0	2.6	1	1	1	2	2	2	1	Cytidylate	kinase-like	family
cobW	PF02492.14	gi|429217240|ref|YP_007175230.1|	-	0.001	18.5	0.0	0.0021	17.5	0.0	1.4	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
Guanylate_kin	PF00625.16	gi|429217240|ref|YP_007175230.1|	-	0.0014	18.1	0.3	0.0028	17.1	0.1	1.6	2	0	0	2	2	2	1	Guanylate	kinase
NTPase_1	PF03266.10	gi|429217240|ref|YP_007175230.1|	-	0.0053	16.4	0.0	0.01	15.5	0.0	1.5	1	0	0	1	1	1	1	NTPase
SKI	PF01202.17	gi|429217240|ref|YP_007175230.1|	-	0.0067	16.3	0.1	0.016	15.0	0.1	1.7	1	1	0	1	1	1	1	Shikimate	kinase
PRK	PF00485.13	gi|429217240|ref|YP_007175230.1|	-	0.0095	15.5	0.0	0.017	14.7	0.0	1.5	1	1	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_30	PF13604.1	gi|429217240|ref|YP_007175230.1|	-	0.013	15.0	0.0	0.021	14.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|429217240|ref|YP_007175230.1|	-	0.018	15.0	0.0	0.028	14.4	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|429217240|ref|YP_007175230.1|	-	0.023	14.8	0.1	0.046	13.8	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|429217240|ref|YP_007175230.1|	-	0.031	14.5	0.0	0.037	14.3	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
DUF258	PF03193.11	gi|429217240|ref|YP_007175230.1|	-	0.043	12.9	0.0	0.076	12.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|429217240|ref|YP_007175230.1|	-	0.063	12.8	0.4	0.11	12.1	0.2	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ArgK	PF03308.11	gi|429217240|ref|YP_007175230.1|	-	0.066	11.9	0.0	0.09	11.5	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_19	PF13245.1	gi|429217240|ref|YP_007175230.1|	-	0.067	12.9	0.0	0.089	12.5	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF2075	PF09848.4	gi|429217240|ref|YP_007175230.1|	-	0.081	11.8	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Torsin	PF06309.6	gi|429217240|ref|YP_007175230.1|	-	0.089	12.6	0.0	0.2	11.5	0.0	1.7	1	0	0	1	1	1	0	Torsin
MobB	PF03205.9	gi|429217240|ref|YP_007175230.1|	-	0.094	12.4	0.1	0.15	11.7	0.1	1.5	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_14	PF13173.1	gi|429217240|ref|YP_007175230.1|	-	0.16	11.9	3.4	0.79	9.6	0.1	2.2	1	1	1	2	2	2	0	AAA	domain
DUF3408	PF11888.3	gi|429217241|ref|YP_007175231.1|	-	0.00052	19.9	0.2	0.00061	19.7	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3408)
RHH_1	PF01402.16	gi|429217241|ref|YP_007175231.1|	-	0.0024	17.7	0.5	0.008	16.0	0.0	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
DUF87	PF01935.12	gi|429217241|ref|YP_007175231.1|	-	0.0029	17.4	0.9	0.0033	17.2	0.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
DDRGK	PF09756.4	gi|429217241|ref|YP_007175231.1|	-	0.009	15.4	0.2	0.009	15.4	0.1	1.7	1	1	1	2	2	2	1	DDRGK	domain
PG_binding_2	PF08823.6	gi|429217241|ref|YP_007175231.1|	-	0.01	15.9	0.6	0.074	13.1	0.1	2.1	1	1	0	2	2	2	1	Putative	peptidoglycan	binding	domain
HHH_3	PF12836.2	gi|429217241|ref|YP_007175231.1|	-	0.017	15.0	0.1	0.034	14.1	0.0	1.5	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
Dak1	PF02733.12	gi|429217241|ref|YP_007175231.1|	-	0.058	11.9	0.1	0.07	11.6	0.1	1.2	1	0	0	1	1	1	0	Dak1	domain
UPF0270	PF06794.7	gi|429217241|ref|YP_007175231.1|	-	0.11	12.2	0.9	4.7	7.0	0.0	2.2	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0270)
CarD_CdnL_TRCF	PF02559.11	gi|429217241|ref|YP_007175231.1|	-	0.13	12.3	0.5	0.15	12.1	0.3	1.1	1	0	0	1	1	1	0	CarD-like/TRCF	domain
Ribosomal_L12	PF00542.14	gi|429217241|ref|YP_007175231.1|	-	0.16	12.0	1.3	11	6.1	0.0	2.1	1	1	1	2	2	2	0	Ribosomal	protein	L7/L12	C-terminal	domain
Surf_Ag_VNR	PF07244.10	gi|429217241|ref|YP_007175231.1|	-	0.25	11.7	2.6	2.8	8.4	0.1	2.1	1	1	1	2	2	2	0	Surface	antigen	variable	number	repeat
GED	PF02212.13	gi|429217241|ref|YP_007175231.1|	-	0.26	11.2	2.1	0.29	11.0	0.8	1.5	1	1	1	2	2	2	0	Dynamin	GTPase	effector	domain
QueC	PF06508.8	gi|429217242|ref|YP_007175232.1|	-	1.7e-40	138.5	0.4	2.3e-40	138.1	0.3	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|429217242|ref|YP_007175232.1|	-	1.2e-06	28.1	0.1	1.7e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
DUF3420	PF11900.3	gi|429217245|ref|YP_007175235.1|	-	0.00017	21.6	0.0	0.00037	20.5	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3420)
Xpo1	PF08389.7	gi|429217245|ref|YP_007175235.1|	-	0.072	12.9	0.4	0.1	12.5	0.3	1.4	1	0	0	1	1	1	0	Exportin	1-like	protein
ABA_GPCR	PF12430.3	gi|429217245|ref|YP_007175235.1|	-	0.085	11.9	0.0	0.18	10.9	0.0	1.7	1	1	0	1	1	1	0	Abscisic	acid	G-protein	coupled	receptor
GFO_IDH_MocA	PF01408.17	gi|429217246|ref|YP_007175236.1|	-	2.3e-18	66.8	0.0	3.5e-18	66.2	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|429217246|ref|YP_007175236.1|	-	1.3e-07	31.4	0.0	2.5e-07	30.4	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
DUF2208	PF09973.4	gi|429217247|ref|YP_007175237.1|	-	0.035	13.3	2.4	0.037	13.2	1.7	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2208)
Mit_proteolip	PF08039.6	gi|429217247|ref|YP_007175237.1|	-	0.082	12.9	0.7	0.28	11.1	0.1	2.0	1	1	1	2	2	2	0	Mitochondrial	proteolipid
YfhO	PF09586.5	gi|429217247|ref|YP_007175237.1|	-	0.14	10.1	3.6	0.14	10.1	2.5	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
Peptidase_U4	PF03419.8	gi|429217247|ref|YP_007175237.1|	-	0.58	9.1	6.0	0.59	9.1	4.2	1.0	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
Claudin_2	PF13903.1	gi|429217247|ref|YP_007175237.1|	-	0.62	9.7	3.3	0.67	9.6	2.3	1.0	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
YlaH	PF14036.1	gi|429217247|ref|YP_007175237.1|	-	0.62	10.1	4.2	0.72	9.9	1.0	1.9	1	1	1	2	2	2	0	YlaH-like	protein
DUF204	PF02659.10	gi|429217247|ref|YP_007175237.1|	-	6.6	6.9	7.2	1.5e+02	2.5	5.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF
ABC_tran	PF00005.22	gi|429217248|ref|YP_007175238.1|	-	6e-30	104.3	0.0	1e-29	103.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|429217248|ref|YP_007175238.1|	-	1.3e-17	63.9	0.1	2.3e-17	63.1	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|429217248|ref|YP_007175238.1|	-	8e-11	42.4	0.4	3e-05	24.1	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|429217248|ref|YP_007175238.1|	-	8.5e-05	22.7	0.2	0.00049	20.2	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|429217248|ref|YP_007175238.1|	-	0.00013	21.2	1.7	0.069	12.1	0.3	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|429217248|ref|YP_007175238.1|	-	0.0016	17.9	0.1	0.0029	17.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|429217248|ref|YP_007175238.1|	-	0.0018	17.8	0.0	0.035	13.5	0.0	2.1	1	1	1	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|429217248|ref|YP_007175238.1|	-	0.0022	17.4	0.1	0.64	9.3	0.1	2.5	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|429217248|ref|YP_007175238.1|	-	0.0033	16.7	0.1	0.017	14.3	0.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|429217248|ref|YP_007175238.1|	-	0.014	14.6	0.0	0.027	13.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
G-alpha	PF00503.15	gi|429217248|ref|YP_007175238.1|	-	0.023	13.4	0.0	0.023	13.3	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_16	PF13191.1	gi|429217248|ref|YP_007175238.1|	-	0.024	14.6	0.1	0.045	13.7	0.1	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Sigma54_activ_2	PF14532.1	gi|429217248|ref|YP_007175238.1|	-	0.028	14.4	0.0	0.055	13.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|429217248|ref|YP_007175238.1|	-	0.029	14.6	0.0	0.051	13.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|429217248|ref|YP_007175238.1|	-	0.04	13.6	0.1	0.098	12.3	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|429217248|ref|YP_007175238.1|	-	0.057	13.3	0.0	0.084	12.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|429217248|ref|YP_007175238.1|	-	0.065	12.6	0.4	0.1	12.0	0.3	1.6	1	1	0	1	1	1	0	FtsK/SpoIIIE	family
KaiC	PF06745.8	gi|429217248|ref|YP_007175238.1|	-	0.074	12.1	0.6	0.25	10.4	0.1	2.0	2	0	0	2	2	2	0	KaiC
NACHT	PF05729.7	gi|429217248|ref|YP_007175238.1|	-	0.078	12.6	0.3	0.16	11.5	0.2	1.5	1	0	0	1	1	1	0	NACHT	domain
UPF0079	PF02367.12	gi|429217248|ref|YP_007175238.1|	-	0.08	12.5	0.2	0.18	11.4	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|429217248|ref|YP_007175238.1|	-	0.094	11.6	0.1	0.16	10.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.1	gi|429217248|ref|YP_007175238.1|	-	0.14	11.7	0.3	0.79	9.2	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|429217249|ref|YP_007175239.1|	-	4.6e-26	91.7	0.0	6.3e-26	91.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|429217249|ref|YP_007175239.1|	-	8.8e-19	67.6	0.0	1.5e-18	66.8	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|429217249|ref|YP_007175239.1|	-	1.8e-12	47.8	5.0	5.6e-10	39.6	3.5	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|429217249|ref|YP_007175239.1|	-	3.8e-05	22.9	7.4	0.03	13.3	3.0	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|429217249|ref|YP_007175239.1|	-	0.0001	21.6	3.0	0.0013	17.9	2.0	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|429217249|ref|YP_007175239.1|	-	0.00023	20.6	0.0	0.0016	17.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|429217249|ref|YP_007175239.1|	-	0.0004	20.7	0.4	0.0007	19.9	0.3	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429217249|ref|YP_007175239.1|	-	0.0004	19.8	0.0	0.00066	19.1	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|429217249|ref|YP_007175239.1|	-	0.0021	17.5	0.1	0.32	10.4	0.1	2.4	3	0	0	3	3	3	1	AAA-like	domain
AAA_17	PF13207.1	gi|429217249|ref|YP_007175239.1|	-	0.0022	18.8	0.6	0.024	15.4	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|429217249|ref|YP_007175239.1|	-	0.0041	17.4	0.6	0.016	15.5	0.1	2.1	2	1	0	2	2	2	1	AAA	domain
PRK	PF00485.13	gi|429217249|ref|YP_007175239.1|	-	0.0058	16.2	0.0	0.0083	15.7	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
CbiA	PF01656.18	gi|429217249|ref|YP_007175239.1|	-	0.014	14.7	2.4	0.16	11.3	0.1	2.3	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
TIP49	PF06068.8	gi|429217249|ref|YP_007175239.1|	-	0.022	13.4	0.1	0.032	12.9	0.0	1.2	1	0	0	1	1	1	0	TIP49	C-terminus
NB-ARC	PF00931.17	gi|429217249|ref|YP_007175239.1|	-	0.024	13.4	0.0	0.22	10.3	0.1	2.1	2	0	0	2	2	2	0	NB-ARC	domain
DnaB_C	PF03796.10	gi|429217249|ref|YP_007175239.1|	-	0.027	13.3	0.2	1.7	7.4	0.0	2.2	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
UPF0079	PF02367.12	gi|429217249|ref|YP_007175239.1|	-	0.03	13.9	0.0	0.066	12.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF258	PF03193.11	gi|429217249|ref|YP_007175239.1|	-	0.037	13.2	0.1	0.2	10.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|429217249|ref|YP_007175239.1|	-	0.057	13.0	0.1	0.1	12.2	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_13	PF13166.1	gi|429217249|ref|YP_007175239.1|	-	0.098	11.1	0.3	2.8	6.3	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|429217249|ref|YP_007175239.1|	-	0.13	12.0	0.5	0.35	10.5	0.1	1.9	2	0	0	2	2	2	0	NTPase
AAA_22	PF13401.1	gi|429217249|ref|YP_007175239.1|	-	0.14	12.2	2.9	2.4	8.2	2.0	2.2	1	1	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|429217249|ref|YP_007175239.1|	-	0.18	10.3	0.4	5.1	5.5	0.0	2.2	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
ArgK	PF03308.11	gi|429217249|ref|YP_007175239.1|	-	0.19	10.4	0.4	0.45	9.2	0.1	1.6	2	0	0	2	2	2	0	ArgK	protein
BPD_transp_1	PF00528.17	gi|429217250|ref|YP_007175240.1|	-	8.2e-12	45.0	22.2	8.2e-12	45.0	15.4	2.2	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|429217250|ref|YP_007175240.1|	-	0.00048	19.4	0.2	0.0028	16.9	0.1	2.4	1	0	0	1	1	1	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|429217251|ref|YP_007175241.1|	-	9e-33	113.3	15.6	9e-33	113.3	10.8	2.3	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.17	gi|429217252|ref|YP_007175242.1|	-	4.2e-15	55.4	3.9	2.3e-09	36.5	1.0	2.8	3	0	0	3	3	3	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|429217252|ref|YP_007175242.1|	-	0.00032	20.4	6.1	0.00058	19.5	4.2	1.4	1	0	0	1	1	1	1	Rifin/stevor	family
TMEM154	PF15102.1	gi|429217252|ref|YP_007175242.1|	-	0.021	14.5	23.7	0.044	13.5	16.4	1.5	1	0	0	1	1	1	0	TMEM154	protein	family
SKG6	PF08693.5	gi|429217252|ref|YP_007175242.1|	-	0.21	10.9	9.2	0.55	9.5	6.4	1.8	1	0	0	1	1	1	0	Transmembrane	alpha-helix	domain
Peptidase_M56	PF05569.6	gi|429217252|ref|YP_007175242.1|	-	0.23	10.3	3.2	0.4	9.5	2.2	1.4	1	0	0	1	1	1	0	BlaR1	peptidase	M56
DUF4064	PF13273.1	gi|429217252|ref|YP_007175242.1|	-	1	9.4	7.0	0.37	10.9	1.5	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Sporozoite_P67	PF05642.6	gi|429217252|ref|YP_007175242.1|	-	6	4.5	16.2	12	3.6	11.2	1.5	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
SBP_bac_1	PF01547.20	gi|429217253|ref|YP_007175243.1|	-	1.3e-18	67.8	13.0	2e-18	67.2	9.0	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|429217253|ref|YP_007175243.1|	-	2.5e-15	56.9	7.4	4.3e-15	56.2	5.2	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SoxE	PF06525.6	gi|429217253|ref|YP_007175243.1|	-	3e-05	23.3	2.9	9.8e-05	21.7	2.0	1.9	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
SBP_bac_11	PF13531.1	gi|429217253|ref|YP_007175243.1|	-	0.0002	21.0	0.1	0.017	14.7	0.0	2.4	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
DUF443	PF04276.7	gi|429217253|ref|YP_007175243.1|	-	0.0082	15.5	1.8	0.023	14.1	0.3	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF443)
DUF1628	PF07790.6	gi|429217253|ref|YP_007175243.1|	-	0.034	14.8	0.6	0.078	13.7	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
Sigma_reg_N	PF13800.1	gi|429217253|ref|YP_007175243.1|	-	0.044	13.8	4.8	0.04	13.9	1.6	2.2	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
4HB_MCP_1	PF12729.2	gi|429217253|ref|YP_007175243.1|	-	0.22	10.8	3.0	0.41	9.9	2.1	1.4	1	0	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
BPD_transp_1	PF00528.17	gi|429217254|ref|YP_007175244.1|	-	1.9e-22	79.6	52.7	9.3e-14	51.3	15.3	3.8	2	2	2	4	4	4	2	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|429217255|ref|YP_007175245.1|	-	2.3e-36	125.1	0.0	3.3e-36	124.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_15	PF13175.1	gi|429217255|ref|YP_007175245.1|	-	2.8e-10	39.8	1.2	6.7e-06	25.3	0.0	2.4	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_21	PF13304.1	gi|429217255|ref|YP_007175245.1|	-	6.4e-09	36.1	5.1	5.1e-06	26.6	0.0	2.9	2	1	0	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|429217255|ref|YP_007175245.1|	-	0.00016	20.9	0.7	0.0013	18.0	0.5	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|429217255|ref|YP_007175245.1|	-	0.00068	19.6	0.3	0.0018	18.3	0.2	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|429217255|ref|YP_007175245.1|	-	0.0012	18.9	0.2	0.0035	17.4	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429217255|ref|YP_007175245.1|	-	0.0059	16.1	0.1	0.013	14.9	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
cobW	PF02492.14	gi|429217255|ref|YP_007175245.1|	-	0.01	15.2	0.1	0.019	14.4	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF258	PF03193.11	gi|429217255|ref|YP_007175245.1|	-	0.01	15.0	0.1	0.015	14.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SbcCD_C	PF13558.1	gi|429217255|ref|YP_007175245.1|	-	0.019	14.8	0.0	0.097	12.5	0.0	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_10	PF12846.2	gi|429217255|ref|YP_007175245.1|	-	0.025	14.0	0.3	0.21	10.9	0.0	2.0	2	0	0	2	2	2	0	AAA-like	domain
AAA_13	PF13166.1	gi|429217255|ref|YP_007175245.1|	-	0.04	12.3	0.0	0.3	9.4	0.0	1.6	1	1	1	2	2	2	0	AAA	domain
DUF4363	PF14276.1	gi|429217255|ref|YP_007175245.1|	-	0.043	13.5	0.1	0.42	10.3	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4363)
AAA_33	PF13671.1	gi|429217255|ref|YP_007175245.1|	-	0.044	13.6	1.0	0.2	11.5	0.7	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|429217255|ref|YP_007175245.1|	-	0.053	13.8	1.7	0.074	13.3	0.4	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|429217255|ref|YP_007175245.1|	-	0.075	12.7	0.0	0.21	11.3	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
Miro	PF08477.8	gi|429217255|ref|YP_007175245.1|	-	0.092	13.2	0.1	0.23	11.9	0.0	1.7	2	0	0	2	2	1	0	Miro-like	protein
UPF0079	PF02367.12	gi|429217255|ref|YP_007175245.1|	-	0.12	12.0	0.2	0.23	11.0	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Nuc_rec_co-act	PF08815.5	gi|429217255|ref|YP_007175245.1|	-	0.15	11.6	0.3	0.43	10.1	0.0	1.9	2	0	0	2	2	1	0	Nuclear	receptor	coactivator
AAA_23	PF13476.1	gi|429217255|ref|YP_007175245.1|	-	0.16	12.2	10.2	0.3	11.3	3.4	3.0	2	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|429217255|ref|YP_007175245.1|	-	0.23	11.0	1.8	0.33	10.5	0.1	2.1	2	1	1	3	3	3	0	NACHT	domain
Epimerase	PF01370.16	gi|429217256|ref|YP_007175246.1|	-	1.7e-53	181.5	0.2	2e-53	181.2	0.2	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|429217256|ref|YP_007175246.1|	-	3.3e-18	65.3	0.5	4.4e-18	64.9	0.3	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|429217256|ref|YP_007175246.1|	-	1.9e-17	63.1	0.0	2.5e-17	62.6	0.0	1.2	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|429217256|ref|YP_007175246.1|	-	2.4e-16	59.5	1.6	2.1e-15	56.4	1.1	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|429217256|ref|YP_007175246.1|	-	4.8e-13	48.6	0.1	3.6e-11	42.4	0.0	2.1	1	1	1	2	2	2	2	Male	sterility	protein
adh_short	PF00106.20	gi|429217256|ref|YP_007175246.1|	-	0.00011	22.1	0.0	0.001	19.0	0.0	2.1	1	1	0	1	1	1	1	short	chain	dehydrogenase
Epimerase_Csub	PF13950.1	gi|429217256|ref|YP_007175246.1|	-	0.00027	20.7	0.0	0.00055	19.8	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
KR	PF08659.5	gi|429217256|ref|YP_007175246.1|	-	0.0038	16.9	0.0	0.18	11.4	0.0	2.2	1	1	0	1	1	1	1	KR	domain
Tektin	PF03148.9	gi|429217257|ref|YP_007175247.1|	-	0.011	14.3	1.8	0.012	14.1	1.2	1.0	1	0	0	1	1	1	0	Tektin	family
DUF4635	PF15466.1	gi|429217257|ref|YP_007175247.1|	-	0.11	11.7	0.0	0.14	11.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4635)
FlaC_arch	PF05377.6	gi|429217257|ref|YP_007175247.1|	-	0.12	12.2	2.9	0.16	11.9	2.0	1.2	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
Acetyltransf_1	PF00583.19	gi|429217258|ref|YP_007175248.1|	-	2.3e-09	37.1	0.1	3.7e-09	36.4	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|429217258|ref|YP_007175248.1|	-	1.1e-07	31.8	0.0	2.2e-07	30.9	0.0	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|429217258|ref|YP_007175248.1|	-	8e-06	25.5	0.0	1.5e-05	24.6	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_10	PF13673.1	gi|429217258|ref|YP_007175248.1|	-	1.8e-05	24.8	0.0	3.1e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|429217258|ref|YP_007175248.1|	-	0.00044	20.4	0.3	0.00072	19.7	0.2	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|429217258|ref|YP_007175248.1|	-	0.00071	19.5	0.2	0.0014	18.5	0.1	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DUF3749	PF12568.3	gi|429217258|ref|YP_007175248.1|	-	0.0024	17.4	0.0	0.0032	17.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|429217258|ref|YP_007175248.1|	-	0.009	15.8	0.0	0.025	14.4	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|429217258|ref|YP_007175248.1|	-	0.038	13.8	0.0	0.071	13.0	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Glyco_transf_7C	PF02709.9	gi|429217258|ref|YP_007175248.1|	-	0.041	13.3	0.4	0.22	10.9	0.2	2.2	2	0	0	2	2	2	0	N-terminal	domain	of	galactosyltransferase
NCA2	PF08637.5	gi|429217258|ref|YP_007175248.1|	-	0.1	11.4	0.0	0.14	11.0	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	regulation	protein	NCA2
Glycos_transf_4	PF00953.16	gi|429217259|ref|YP_007175249.1|	-	3.2e-31	108.2	24.1	3.2e-31	108.2	16.7	2.3	3	0	0	3	3	3	1	Glycosyl	transferase	family	4
Phosphodiest	PF01663.17	gi|429217260|ref|YP_007175250.1|	-	9.9e-50	169.8	0.7	1.2e-49	169.5	0.5	1.0	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.15	gi|429217260|ref|YP_007175250.1|	-	0.042	12.5	0.0	0.22	10.1	0.0	1.8	1	1	0	1	1	1	0	Alkaline	phosphatase
Sulfatase	PF00884.18	gi|429217260|ref|YP_007175250.1|	-	0.061	12.4	0.4	0.16	11.1	0.3	1.9	1	1	0	1	1	1	0	Sulfatase
Metalloenzyme	PF01676.13	gi|429217260|ref|YP_007175250.1|	-	0.086	12.2	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Metalloenzyme	superfamily
Baculo_PEP_C	PF04513.7	gi|429217261|ref|YP_007175251.1|	-	1.2e-08	34.9	35.5	1.5e-05	24.8	8.8	3.4	1	1	2	3	3	3	3	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF1664	PF07889.7	gi|429217261|ref|YP_007175251.1|	-	9.8e-08	31.8	4.8	0.00014	21.6	0.4	3.5	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1664)
NPV_P10	PF05531.7	gi|429217261|ref|YP_007175251.1|	-	1.5e-06	28.3	8.1	0.033	14.4	0.1	4.3	1	1	4	5	5	5	3	Nucleopolyhedrovirus	P10	protein
AAA_13	PF13166.1	gi|429217261|ref|YP_007175251.1|	-	4.3e-06	25.5	1.5	6.2e-06	24.9	1.0	1.1	1	0	0	1	1	1	1	AAA	domain
BLOC1_2	PF10046.4	gi|429217261|ref|YP_007175251.1|	-	1.4e-05	25.1	5.6	0.00086	19.3	0.5	2.9	1	1	2	3	3	3	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Bacillus_HBL	PF05791.6	gi|429217261|ref|YP_007175251.1|	-	2.8e-05	23.5	2.4	0.013	14.8	0.2	2.5	1	1	1	2	2	2	2	Bacillus	haemolytic	enterotoxin	(HBL)
Reo_sigmaC	PF04582.7	gi|429217261|ref|YP_007175251.1|	-	4e-05	22.9	58.7	0.0017	17.5	21.8	3.1	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
SF-assemblin	PF06705.6	gi|429217261|ref|YP_007175251.1|	-	0.00013	21.2	5.7	0.013	14.7	0.2	2.9	1	1	2	3	3	3	2	SF-assemblin/beta	giardin
DUF4618	PF15397.1	gi|429217261|ref|YP_007175251.1|	-	0.00022	20.6	0.0	0.00037	19.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4618)
Spc7	PF08317.6	gi|429217261|ref|YP_007175251.1|	-	0.00053	18.7	2.8	0.00081	18.1	0.3	1.9	1	1	1	2	2	2	1	Spc7	kinetochore	protein
IFT57	PF10498.4	gi|429217261|ref|YP_007175251.1|	-	0.0014	17.4	4.5	0.0062	15.3	1.8	2.0	1	1	1	2	2	2	1	Intra-flagellar	transport	protein	57
CENP-F_leu_zip	PF10473.4	gi|429217261|ref|YP_007175251.1|	-	0.003	17.4	1.9	0.08	12.7	0.3	2.4	1	1	1	2	2	2	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF3584	PF12128.3	gi|429217261|ref|YP_007175251.1|	-	0.012	13.0	0.0	0.018	12.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
CENP-Q	PF13094.1	gi|429217261|ref|YP_007175251.1|	-	0.012	15.5	1.1	2.5	8.0	0.8	2.6	2	1	0	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Gp58	PF07902.6	gi|429217261|ref|YP_007175251.1|	-	0.014	13.6	26.2	0.04	12.1	18.2	1.6	1	1	0	1	1	1	0	gp58-like	protein
Filament	PF00038.16	gi|429217261|ref|YP_007175251.1|	-	0.014	14.8	0.8	0.24	10.8	0.2	2.0	1	1	2	3	3	3	0	Intermediate	filament	protein
WEMBL	PF05701.6	gi|429217261|ref|YP_007175251.1|	-	0.019	13.4	5.3	0.027	12.9	3.7	1.2	1	0	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
EzrA	PF06160.7	gi|429217261|ref|YP_007175251.1|	-	0.027	12.6	0.0	0.05	11.7	0.0	1.4	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
FH2	PF02181.18	gi|429217261|ref|YP_007175251.1|	-	0.028	13.2	0.5	0.65	8.8	0.2	2.1	1	1	1	2	2	2	0	Formin	Homology	2	Domain
FlaC_arch	PF05377.6	gi|429217261|ref|YP_007175251.1|	-	0.029	14.2	18.2	0.21	11.5	0.6	5.5	2	1	3	5	5	5	0	Flagella	accessory	protein	C	(FlaC)
TPR_MLP1_2	PF07926.7	gi|429217261|ref|YP_007175251.1|	-	0.03	14.0	4.0	0.14	11.8	0.5	2.7	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
COG5	PF10392.4	gi|429217261|ref|YP_007175251.1|	-	0.032	14.1	29.6	0.083	12.8	5.2	3.6	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
COG2	PF06148.6	gi|429217261|ref|YP_007175251.1|	-	0.036	13.9	18.6	1.1	9.1	1.5	3.3	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
TBPIP	PF07106.8	gi|429217261|ref|YP_007175251.1|	-	0.038	13.5	3.5	1.1	8.7	1.0	2.9	1	1	2	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
MscS_porin	PF12795.2	gi|429217261|ref|YP_007175251.1|	-	0.046	13.0	18.2	0.022	14.0	2.0	2.3	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
Med4	PF10018.4	gi|429217261|ref|YP_007175251.1|	-	0.066	12.6	2.9	1.1	8.6	1.2	2.5	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
TMF_DNA_bd	PF12329.3	gi|429217261|ref|YP_007175251.1|	-	0.072	12.9	10.2	4.2	7.2	0.9	3.6	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Motile_Sperm	PF00635.21	gi|429217261|ref|YP_007175251.1|	-	0.077	12.6	0.7	0.34	10.5	0.5	2.2	1	0	0	1	1	1	0	MSP	(Major	sperm	protein)	domain
Apolipoprotein	PF01442.13	gi|429217261|ref|YP_007175251.1|	-	0.091	12.2	0.0	0.2	11.1	0.0	1.5	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
CCDC155	PF14662.1	gi|429217261|ref|YP_007175251.1|	-	0.1	12.1	0.1	1.2	8.7	0.1	2.1	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155
ATG16	PF08614.6	gi|429217261|ref|YP_007175251.1|	-	0.11	12.2	4.6	0.23	11.2	3.2	1.5	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
Phasin	PF05597.6	gi|429217261|ref|YP_007175251.1|	-	0.15	11.8	0.3	0.87	9.3	0.0	2.1	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
bZIP_1	PF00170.16	gi|429217261|ref|YP_007175251.1|	-	0.18	11.7	1.3	1.2e+02	2.6	0.1	3.7	2	1	1	4	4	4	0	bZIP	transcription	factor
ADIP	PF11559.3	gi|429217261|ref|YP_007175251.1|	-	0.19	11.6	6.3	3.1	7.6	0.3	3.4	1	1	3	4	4	4	0	Afadin-	and	alpha	-actinin-Binding
Syntaxin-6_N	PF09177.6	gi|429217261|ref|YP_007175251.1|	-	0.23	11.9	10.8	4.4	7.7	2.1	3.2	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
DUF3450	PF11932.3	gi|429217261|ref|YP_007175251.1|	-	0.23	10.7	0.1	0.43	9.8	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Lzipper-MIP1	PF14389.1	gi|429217261|ref|YP_007175251.1|	-	0.24	11.5	1.2	12	6.0	0.2	2.7	1	1	2	3	3	3	0	Leucine-zipper	of	ternary	complex	factor	MIP1
Laminin_II	PF06009.7	gi|429217261|ref|YP_007175251.1|	-	0.25	11.1	16.6	0.059	13.1	2.2	2.7	1	1	1	2	2	2	0	Laminin	Domain	II
RmuC	PF02646.11	gi|429217261|ref|YP_007175251.1|	-	0.3	9.8	1.6	4.4	6.0	0.4	2.5	1	1	1	2	2	2	0	RmuC	family
Fib_alpha	PF08702.5	gi|429217261|ref|YP_007175251.1|	-	0.3	11.2	5.9	1.6	8.8	3.1	2.3	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Myosin_tail_1	PF01576.14	gi|429217261|ref|YP_007175251.1|	-	0.31	8.7	0.4	0.89	7.2	0.3	1.5	1	1	0	1	1	1	0	Myosin	tail
AIP3	PF03915.8	gi|429217261|ref|YP_007175251.1|	-	0.35	9.7	14.1	0.55	9.0	9.3	1.5	1	1	0	1	1	1	0	Actin	interacting	protein	3
Prefoldin_2	PF01920.15	gi|429217261|ref|YP_007175251.1|	-	0.39	10.4	0.0	16	5.3	0.0	2.9	1	1	1	2	2	2	0	Prefoldin	subunit
TMF_TATA_bd	PF12325.3	gi|429217261|ref|YP_007175251.1|	-	0.47	10.1	3.8	1.3	8.7	0.1	2.5	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
Vps53_N	PF04100.7	gi|429217261|ref|YP_007175251.1|	-	0.88	8.2	8.3	0.44	9.2	2.7	2.1	1	1	0	2	2	2	0	Vps53-like,	N-terminal
LXG	PF04740.7	gi|429217261|ref|YP_007175251.1|	-	0.95	9.2	6.4	3.3	7.4	4.4	1.8	1	1	0	1	1	1	0	LXG	domain	of	WXG	superfamily
DUF4600	PF15372.1	gi|429217261|ref|YP_007175251.1|	-	1.2	9.4	3.1	14	5.9	0.5	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4600)
Lectin_N	PF03954.9	gi|429217261|ref|YP_007175251.1|	-	1.3	8.4	35.9	0.36	10.2	4.6	3.4	1	1	2	3	3	3	0	Hepatic	lectin,	N-terminal	domain
Syntaxin	PF00804.20	gi|429217261|ref|YP_007175251.1|	-	3.4	7.8	11.0	12	6.1	3.6	2.5	1	1	1	2	2	2	0	Syntaxin
MCPsignal	PF00015.16	gi|429217261|ref|YP_007175251.1|	-	5.6	6.4	26.4	0.76	9.2	8.6	2.4	1	1	1	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Hydrolase_3	PF08282.7	gi|429217262|ref|YP_007175252.1|	-	1.1e-11	44.8	3.5	6.5e-07	29.1	0.1	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|429217262|ref|YP_007175252.1|	-	1.3e-06	27.9	0.0	2.4e-06	27.0	0.0	1.6	1	1	0	1	1	1	1	Sucrose-6F-phosphate	phosphohydrolase
Trehalose_PPase	PF02358.11	gi|429217262|ref|YP_007175252.1|	-	2.4e-06	26.6	0.1	8.4e-06	24.8	0.1	2.0	1	1	0	1	1	1	1	Trehalose-phosphatase
HAD	PF12710.2	gi|429217262|ref|YP_007175252.1|	-	0.0043	17.2	0.0	0.014	15.6	0.0	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF1840	PF08895.6	gi|429217262|ref|YP_007175252.1|	-	0.043	13.8	0.0	0.072	13.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1840)
TM_helix	PF05552.7	gi|429217263|ref|YP_007175253.1|	-	5.5e-06	25.9	3.1	5.5e-06	25.9	2.2	3.4	3	0	0	3	3	3	1	Conserved	TM	helix
Colicin_V	PF02674.11	gi|429217263|ref|YP_007175253.1|	-	0.89	9.3	24.5	1.8	8.3	6.9	2.9	1	1	2	3	3	3	0	Colicin	V	production	protein
Glycos_transf_1	PF00534.15	gi|429217264|ref|YP_007175254.1|	-	5e-26	91.1	0.8	1.1e-25	90.0	0.5	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|429217264|ref|YP_007175254.1|	-	5.1e-08	33.1	0.0	1.8e-07	31.4	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|429217264|ref|YP_007175254.1|	-	0.0019	18.4	0.0	0.0037	17.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MMR_HSR1	PF01926.18	gi|429217265|ref|YP_007175255.1|	-	3e-19	69.0	0.2	1.4e-18	66.9	0.1	2.0	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|429217265|ref|YP_007175255.1|	-	2.3e-08	33.4	0.1	7e-08	31.9	0.0	1.8	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|429217265|ref|YP_007175255.1|	-	7.9e-07	29.5	0.0	1.8e-06	28.4	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
TGS	PF02824.16	gi|429217265|ref|YP_007175255.1|	-	2e-06	27.5	0.0	4.4e-06	26.4	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
SRPRB	PF09439.5	gi|429217265|ref|YP_007175255.1|	-	0.0081	15.3	0.0	0.016	14.4	0.0	1.5	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Dynamin_N	PF00350.18	gi|429217265|ref|YP_007175255.1|	-	0.0083	15.9	1.4	0.27	11.0	0.1	2.6	1	1	0	2	2	2	1	Dynamin	family
AAA_17	PF13207.1	gi|429217265|ref|YP_007175255.1|	-	0.011	16.6	0.0	0.05	14.4	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|429217265|ref|YP_007175255.1|	-	0.014	15.5	0.0	0.08	13.0	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
GTP_EFTU	PF00009.22	gi|429217265|ref|YP_007175255.1|	-	0.02	14.3	0.1	2	7.7	0.0	3.0	2	1	1	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
AAA_28	PF13521.1	gi|429217265|ref|YP_007175255.1|	-	0.024	14.6	0.0	0.12	12.2	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Gtr1_RagA	PF04670.7	gi|429217265|ref|YP_007175255.1|	-	0.05	12.7	0.0	0.088	11.9	0.0	1.4	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
CBS	PF00571.23	gi|429217265|ref|YP_007175255.1|	-	0.051	13.3	0.1	0.26	11.1	0.0	2.2	2	0	0	2	2	2	0	CBS	domain
DUF1938	PF09153.5	gi|429217265|ref|YP_007175255.1|	-	0.065	13.0	0.2	0.15	11.9	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1938)
MobB	PF03205.9	gi|429217265|ref|YP_007175255.1|	-	0.1	12.2	0.0	0.34	10.6	0.0	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Lactamase_B	PF00753.22	gi|429217266|ref|YP_007175256.1|	-	9.1e-20	71.1	0.0	1.2e-19	70.6	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|429217266|ref|YP_007175256.1|	-	0.00053	19.5	0.1	0.00084	18.9	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
HTH_5	PF01022.15	gi|429217266|ref|YP_007175256.1|	-	0.00061	19.4	0.4	1.7	8.3	0.0	2.8	3	0	0	3	3	3	2	Bacterial	regulatory	protein,	arsR	family
SIR2	PF02146.12	gi|429217267|ref|YP_007175257.1|	-	2.6e-54	183.6	0.0	3.3e-54	183.3	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
TPP_enzyme_M	PF00205.17	gi|429217267|ref|YP_007175257.1|	-	0.0023	17.7	0.0	0.21	11.3	0.0	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
DUF164	PF02591.10	gi|429217267|ref|YP_007175257.1|	-	0.022	14.5	0.5	0.058	13.2	0.1	1.9	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|429217267|ref|YP_007175257.1|	-	0.069	13.1	0.5	0.17	11.8	0.4	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429217267|ref|YP_007175257.1|	-	1	8.9	5.5	8.7	5.9	3.5	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
Antitoxin-MazE	PF04014.13	gi|429217268|ref|YP_007175258.1|	-	2.7e-12	46.1	0.0	6.2e-12	44.9	0.0	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
POR	PF01558.13	gi|429217269|ref|YP_007175259.1|	-	3.5e-42	144.2	0.1	4.1e-42	144.0	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF1360	PF07098.6	gi|429217269|ref|YP_007175259.1|	-	0.1	12.3	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1360)
Fer4	PF00037.22	gi|429217270|ref|YP_007175260.1|	-	8.9e-15	53.5	14.9	9.4e-08	31.3	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|429217270|ref|YP_007175260.1|	-	2.1e-11	43.4	8.5	3.3e-11	42.8	5.9	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|429217270|ref|YP_007175260.1|	-	5.5e-11	42.1	24.5	3.6e-08	33.0	9.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|429217270|ref|YP_007175260.1|	-	1.3e-10	41.4	22.3	8.2e-09	35.7	8.3	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|429217270|ref|YP_007175260.1|	-	8.5e-10	37.9	11.9	4.2e-05	23.2	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|429217270|ref|YP_007175260.1|	-	9.5e-10	39.0	9.8	0.00018	22.1	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|429217270|ref|YP_007175260.1|	-	1.4e-08	34.8	11.5	2.3e-08	34.1	7.9	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217270|ref|YP_007175260.1|	-	1.7e-07	30.7	15.3	0.00083	19.1	2.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|429217270|ref|YP_007175260.1|	-	2.7e-07	30.4	9.7	3.7e-07	30.0	6.7	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|429217270|ref|YP_007175260.1|	-	2.1e-05	25.0	9.4	0.01	16.4	0.2	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|429217270|ref|YP_007175260.1|	-	0.00011	22.2	12.6	0.0075	16.5	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|429217270|ref|YP_007175260.1|	-	0.00031	21.0	11.9	0.00094	19.4	8.3	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|429217270|ref|YP_007175260.1|	-	0.0013	19.0	13.7	0.034	14.5	9.5	2.5	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|429217270|ref|YP_007175260.1|	-	0.0051	17.2	13.4	0.012	16.0	1.7	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|429217270|ref|YP_007175260.1|	-	0.015	15.8	17.7	0.12	13.0	4.6	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Ral	PF11058.3	gi|429217270|ref|YP_007175260.1|	-	0.13	11.6	1.6	0.32	10.3	1.1	1.6	1	0	0	1	1	1	0	Antirestriction	protein	Ral
Fer4_11	PF13247.1	gi|429217270|ref|YP_007175260.1|	-	0.26	11.1	7.8	1	9.3	5.4	1.7	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DUF678	PF05077.7	gi|429217270|ref|YP_007175260.1|	-	0.45	10.5	4.5	2.2	8.3	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF678)
ADH_N	PF08240.7	gi|429217270|ref|YP_007175260.1|	-	0.5	10.1	4.8	1.9	8.2	3.3	1.8	1	1	0	1	1	1	0	Alcohol	dehydrogenase	GroES-like	domain
POR_N	PF01855.14	gi|429217271|ref|YP_007175261.1|	-	3.1e-71	239.5	0.6	4.2e-71	239.1	0.4	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
TPP_enzyme_C	PF02775.16	gi|429217272|ref|YP_007175262.1|	-	1.5e-26	92.8	0.1	2.1e-26	92.3	0.1	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|429217272|ref|YP_007175262.1|	-	0.038	12.9	0.2	0.064	12.1	0.1	1.3	1	0	0	1	1	1	0	1-deoxy-D-xylulose-5-phosphate	synthase
CN_hydrolase	PF00795.17	gi|429217273|ref|YP_007175263.1|	-	1.6e-05	24.3	0.0	2.7e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DNA_pol_B	PF00136.16	gi|429217274|ref|YP_007175264.1|	-	2.3e-20	72.8	1.0	4.4e-20	71.9	0.7	1.4	1	0	0	1	1	1	1	DNA	polymerase	family	B
2-Hacid_dh_C	PF02826.14	gi|429217277|ref|YP_007175267.1|	-	1.2e-65	220.0	0.0	1.7e-65	219.5	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|429217277|ref|YP_007175267.1|	-	1.6e-35	121.4	0.0	2.2e-35	121.0	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|429217277|ref|YP_007175267.1|	-	1.8e-05	24.6	0.1	3.4e-05	23.7	0.1	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|429217277|ref|YP_007175267.1|	-	9.7e-05	21.7	0.3	0.00052	19.4	0.0	2.1	2	1	1	3	3	3	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|429217277|ref|YP_007175267.1|	-	0.0015	18.9	0.0	0.0031	17.8	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.1	gi|429217277|ref|YP_007175267.1|	-	0.0078	16.4	0.1	0.022	15.0	0.0	1.7	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|429217277|ref|YP_007175267.1|	-	0.04	13.9	0.5	0.7	9.9	0.0	2.5	2	0	0	2	2	2	0	TrkA-N	domain
HTH_24	PF13412.1	gi|429217278|ref|YP_007175268.1|	-	3.1e-10	39.2	0.2	1.2e-09	37.4	0.1	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|429217278|ref|YP_007175268.1|	-	5e-06	26.1	0.2	8.5e-06	25.3	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|429217278|ref|YP_007175268.1|	-	9.6e-05	21.8	0.0	0.00019	20.9	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|429217278|ref|YP_007175268.1|	-	0.002	17.8	0.0	0.0031	17.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|429217278|ref|YP_007175268.1|	-	0.002	18.3	0.0	0.0034	17.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|429217278|ref|YP_007175268.1|	-	0.0025	17.4	0.0	0.0044	16.6	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|429217278|ref|YP_007175268.1|	-	0.0042	16.7	0.0	0.0066	16.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
DUF2250	PF10007.4	gi|429217278|ref|YP_007175268.1|	-	0.039	13.8	0.2	0.07	13.0	0.1	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
O-antigen_lig	PF13425.1	gi|429217278|ref|YP_007175268.1|	-	0.064	13.2	0.1	0.064	13.2	0.0	2.4	2	1	0	2	2	2	0	O-antigen	ligase	like	membrane	protein
OSTbeta	PF15048.1	gi|429217278|ref|YP_007175268.1|	-	0.18	11.9	0.1	0.18	11.9	0.1	1.7	2	0	0	2	2	2	0	Organic	solute	transporter	subunit	beta	protein
Gram_pos_anchor	PF00746.16	gi|429217278|ref|YP_007175268.1|	-	0.35	10.7	1.3	3	7.7	0.1	2.4	2	0	0	2	2	2	0	Gram	positive	anchor
Frag1	PF10277.4	gi|429217278|ref|YP_007175268.1|	-	0.72	9.2	6.0	1.2	8.5	2.6	2.0	2	0	0	2	2	2	0	Frag1/DRAM/Sfk1	family
DUF131	PF01998.12	gi|429217278|ref|YP_007175268.1|	-	4.9	6.5	11.9	3.8	6.9	2.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF131
Vpu	PF00558.14	gi|429217278|ref|YP_007175268.1|	-	6	6.4	9.3	2.6	7.6	1.9	2.5	3	0	0	3	3	2	0	Vpu	protein
ASFV_J13L	PF05568.6	gi|429217278|ref|YP_007175268.1|	-	8.7	5.8	8.3	0.11	12.0	0.5	1.6	2	0	0	2	2	1	0	African	swine	fever	virus	J13L	protein
Peptidase_M48	PF01435.13	gi|429217279|ref|YP_007175269.1|	-	3.7e-33	115.0	0.0	8.9e-33	113.7	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|429217279|ref|YP_007175269.1|	-	0.00079	18.4	3.5	0.0027	16.7	0.7	2.6	2	1	0	2	2	2	1	BlaR1	peptidase	M56
MNHE	PF01899.11	gi|429217279|ref|YP_007175269.1|	-	1.4	8.5	6.4	0.73	9.4	1.9	2.2	2	0	0	2	2	2	0	Na+/H+	ion	antiporter	subunit
Yip1	PF04893.12	gi|429217279|ref|YP_007175269.1|	-	1.5	8.2	25.3	0.32	10.4	0.2	3.2	2	1	0	2	2	2	0	Yip1	domain
Tetraspannin	PF00335.15	gi|429217279|ref|YP_007175269.1|	-	3.2	6.9	13.8	2.8	7.1	0.0	2.6	2	1	0	2	2	2	0	Tetraspanin	family
Claudin_2	PF13903.1	gi|429217279|ref|YP_007175269.1|	-	3.4	7.3	8.9	2.4	7.8	2.1	2.8	2	1	1	3	3	3	0	PMP-22/EMP/MP20/Claudin	tight	junction
Zn_peptidase_2	PF04298.7	gi|429217279|ref|YP_007175269.1|	-	4.2	6.6	8.2	0.1	11.9	0.8	1.8	2	0	0	2	2	2	0	Putative	neutral	zinc	metallopeptidase
MARVEL	PF01284.18	gi|429217279|ref|YP_007175269.1|	-	8.5	6.1	14.1	1.3	8.8	6.1	2.1	2	0	0	2	2	2	0	Membrane-associating	domain
Cytidylate_kin2	PF13189.1	gi|429217280|ref|YP_007175270.1|	-	3e-22	79.4	0.7	1.8e-20	73.6	0.5	2.1	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|429217280|ref|YP_007175270.1|	-	9.7e-15	55.0	0.2	1.4e-14	54.4	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|429217280|ref|YP_007175270.1|	-	6e-13	49.6	0.4	1.1e-12	48.8	0.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|429217280|ref|YP_007175270.1|	-	2.9e-06	27.2	0.0	4.2e-06	26.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|429217280|ref|YP_007175270.1|	-	4.8e-05	23.2	0.2	0.00011	22.1	0.2	1.6	1	1	0	1	1	1	1	Shikimate	kinase
AAA_16	PF13191.1	gi|429217280|ref|YP_007175270.1|	-	6.5e-05	23.0	0.0	0.00012	22.1	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_28	PF13521.1	gi|429217280|ref|YP_007175270.1|	-	6.8e-05	22.8	0.0	9.1e-05	22.4	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|429217280|ref|YP_007175270.1|	-	8.3e-05	21.9	0.3	0.00023	20.4	0.2	1.9	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_22	PF13401.1	gi|429217280|ref|YP_007175270.1|	-	0.00011	22.3	0.0	0.0002	21.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|429217280|ref|YP_007175270.1|	-	0.00022	21.1	0.0	0.00039	20.3	0.0	1.4	1	1	0	1	1	1	1	Adenylate	kinase
AAA	PF00004.24	gi|429217280|ref|YP_007175270.1|	-	0.00025	21.2	0.0	0.00041	20.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PRK	PF00485.13	gi|429217280|ref|YP_007175270.1|	-	0.00068	19.2	0.0	0.46	9.9	0.0	2.2	2	0	0	2	2	2	2	Phosphoribulokinase	/	Uridine	kinase	family
ATP_bind_2	PF03668.10	gi|429217280|ref|YP_007175270.1|	-	0.00081	18.5	0.1	0.0018	17.3	0.1	1.5	1	1	0	1	1	1	1	P-loop	ATPase	protein	family
AAA_14	PF13173.1	gi|429217280|ref|YP_007175270.1|	-	0.0009	19.1	0.2	0.0014	18.5	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
Rad17	PF03215.10	gi|429217280|ref|YP_007175270.1|	-	0.001	17.8	0.0	0.0018	17.0	0.0	1.4	1	1	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
RNA_helicase	PF00910.17	gi|429217280|ref|YP_007175270.1|	-	0.0013	18.9	0.0	0.0027	17.8	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
AAA_19	PF13245.1	gi|429217280|ref|YP_007175270.1|	-	0.0019	17.8	0.0	0.0034	17.0	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|429217280|ref|YP_007175270.1|	-	0.0022	17.1	0.0	0.0044	16.1	0.0	1.6	1	1	0	1	1	1	1	Zeta	toxin
NACHT	PF05729.7	gi|429217280|ref|YP_007175270.1|	-	0.0025	17.4	0.0	0.0042	16.7	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
ATP_bind_1	PF03029.12	gi|429217280|ref|YP_007175270.1|	-	0.0026	17.3	0.0	0.049	13.1	0.0	2.1	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_10	PF12846.2	gi|429217280|ref|YP_007175270.1|	-	0.0033	16.9	0.1	0.0034	16.8	0.0	1.6	1	1	0	1	1	1	1	AAA-like	domain
CoaE	PF01121.15	gi|429217280|ref|YP_007175270.1|	-	0.0057	16.0	0.0	1.5	8.2	0.0	2.2	1	1	1	2	2	2	1	Dephospho-CoA	kinase
RC-P840_PscD	PF10657.4	gi|429217280|ref|YP_007175270.1|	-	0.0075	16.1	0.1	0.013	15.3	0.1	1.3	1	0	0	1	1	1	1	Photosystem	P840	reaction	centre	protein	PscD
Thymidylate_kin	PF02223.12	gi|429217280|ref|YP_007175270.1|	-	0.0086	15.4	0.1	18	4.6	0.0	3.2	1	1	2	3	3	3	0	Thymidylate	kinase
AAA_5	PF07728.9	gi|429217280|ref|YP_007175270.1|	-	0.0095	15.6	0.0	0.029	14.1	0.0	1.8	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
DUF2226	PF09987.4	gi|429217280|ref|YP_007175270.1|	-	0.014	14.5	2.1	0.019	14.1	0.4	1.7	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
VirE	PF05272.6	gi|429217280|ref|YP_007175270.1|	-	0.015	14.7	0.0	0.024	14.1	0.0	1.3	1	0	0	1	1	1	0	Virulence-associated	protein	E
T2SE	PF00437.15	gi|429217280|ref|YP_007175270.1|	-	0.018	13.9	0.0	0.039	12.8	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NTPase_1	PF03266.10	gi|429217280|ref|YP_007175270.1|	-	0.02	14.5	0.0	0.032	13.9	0.0	1.5	1	0	0	1	1	1	0	NTPase
Arch_ATPase	PF01637.13	gi|429217280|ref|YP_007175270.1|	-	0.022	14.4	0.2	0.031	13.9	0.1	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
Viral_helicase1	PF01443.13	gi|429217280|ref|YP_007175270.1|	-	0.024	14.1	0.0	0.033	13.7	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RuvB_N	PF05496.7	gi|429217280|ref|YP_007175270.1|	-	0.025	13.6	0.0	0.049	12.6	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Mg_chelatase	PF01078.16	gi|429217280|ref|YP_007175270.1|	-	0.028	13.6	0.0	0.047	12.8	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
CobU	PF02283.11	gi|429217280|ref|YP_007175270.1|	-	0.03	13.7	0.1	0.088	12.2	0.1	2.0	1	1	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA_24	PF13479.1	gi|429217280|ref|YP_007175270.1|	-	0.052	13.1	0.0	0.11	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Guanylate_kin	PF00625.16	gi|429217280|ref|YP_007175270.1|	-	0.06	12.7	2.7	2.6	7.4	0.0	3.0	1	1	2	3	3	3	0	Guanylate	kinase
AAA_30	PF13604.1	gi|429217280|ref|YP_007175270.1|	-	0.065	12.8	0.0	0.65	9.5	0.0	2.0	1	1	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|429217280|ref|YP_007175270.1|	-	0.09	12.3	0.0	0.2	11.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|429217280|ref|YP_007175270.1|	-	0.12	12.3	0.0	0.8	9.7	0.0	2.1	1	1	0	1	1	1	0	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|429217280|ref|YP_007175270.1|	-	0.13	12.5	0.0	0.17	12.1	0.0	1.3	1	1	0	1	1	1	0	ABC	transporter
AAA_23	PF13476.1	gi|429217280|ref|YP_007175270.1|	-	0.98	9.7	7.1	2.5	8.3	4.9	1.9	1	1	0	1	1	1	0	AAA	domain
Alba	PF01918.16	gi|429217281|ref|YP_007175271.1|	-	2.4e-16	59.0	1.8	3.3e-16	58.6	1.2	1.2	1	0	0	1	1	1	1	Alba
ApbA_C	PF08546.6	gi|429217281|ref|YP_007175271.1|	-	0.11	12.5	0.1	0.11	12.4	0.0	1.1	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA	C	terminal
Rpp20	PF12328.3	gi|429217281|ref|YP_007175271.1|	-	0.34	10.5	5.8	11	5.6	4.0	2.1	1	1	0	1	1	1	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
Vpu	PF00558.14	gi|429217282|ref|YP_007175272.1|	-	0.026	14.0	0.6	0.059	12.9	0.4	1.6	1	0	0	1	1	1	0	Vpu	protein
Sec20	PF03908.8	gi|429217282|ref|YP_007175272.1|	-	5.7	6.7	8.3	7.3	6.3	1.0	2.6	1	1	1	2	2	2	0	Sec20
TPR_8	PF13181.1	gi|429217282|ref|YP_007175272.1|	-	7.1	6.6	7.0	1.1	9.1	0.1	3.1	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Antitoxin-MazE	PF04014.13	gi|429217283|ref|YP_007175273.1|	-	7.6e-08	31.9	0.0	1.5e-07	30.9	0.0	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
T2SF	PF00482.18	gi|429217283|ref|YP_007175273.1|	-	0.04	13.8	0.3	0.15	11.9	0.2	1.9	2	0	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	F
Gln-synt_C	PF00120.19	gi|429217284|ref|YP_007175274.1|	-	1.2e-85	286.7	0.0	1.6e-85	286.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|429217284|ref|YP_007175274.1|	-	1.2e-20	72.8	0.2	4.2e-20	71.1	0.0	2.0	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
DUF4427	PF14468.1	gi|429217284|ref|YP_007175274.1|	-	0.028	14.1	0.0	0.067	12.9	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4427)
Biotin_lipoyl_2	PF13533.1	gi|429217284|ref|YP_007175274.1|	-	0.069	12.8	0.1	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	Biotin-lipoyl	like
Fer4_13	PF13370.1	gi|429217285|ref|YP_007175275.1|	-	1.1e-16	60.9	1.8	1.4e-16	60.5	1.3	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|429217285|ref|YP_007175275.1|	-	1.8e-15	57.2	2.4	2.3e-15	56.9	1.7	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_9	PF13187.1	gi|429217285|ref|YP_007175275.1|	-	0.00073	19.7	1.2	0.001	19.2	0.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|429217285|ref|YP_007175275.1|	-	0.38	10.4	4.7	2.1	8.1	0.5	2.8	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|429217285|ref|YP_007175275.1|	-	1.2	9.1	5.0	16	5.5	0.6	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
PAC2	PF09754.4	gi|429217286|ref|YP_007175276.1|	-	2.5e-32	112.5	0.1	3e-32	112.2	0.1	1.0	1	0	0	1	1	1	1	PAC2	family
HSP20	PF00011.16	gi|429217287|ref|YP_007175277.1|	-	3e-06	27.0	0.0	4e-06	26.6	0.0	1.2	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
CUT	PF02376.10	gi|429217287|ref|YP_007175277.1|	-	0.097	12.4	0.0	0.16	11.7	0.0	1.3	1	0	0	1	1	1	0	CUT	domain
CCG	PF02754.11	gi|429217288|ref|YP_007175278.1|	-	1.8e-24	85.5	0.1	4.3e-13	49.0	0.0	2.5	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|429217288|ref|YP_007175278.1|	-	2.6e-12	46.5	6.2	2.6e-12	46.5	4.3	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|429217288|ref|YP_007175278.1|	-	2.9e-10	39.7	7.8	8.5e-10	38.2	5.4	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217288|ref|YP_007175278.1|	-	2.9e-08	33.8	6.4	2.9e-08	33.8	4.4	3.0	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|429217288|ref|YP_007175278.1|	-	4.3e-08	33.7	3.8	1.6e-07	31.9	2.6	2.1	1	0	0	1	1	1	1	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.2	gi|429217288|ref|YP_007175278.1|	-	2.5e-07	30.9	10.4	3.5e-06	27.3	7.9	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Nitrate_red_gam	PF02665.9	gi|429217288|ref|YP_007175278.1|	-	5.1e-07	29.2	4.8	9.3e-07	28.4	3.3	1.3	1	0	0	1	1	1	1	Nitrate	reductase	gamma	subunit
Fer4_2	PF12797.2	gi|429217288|ref|YP_007175278.1|	-	6.1e-07	28.9	18.3	7.7e-05	22.3	1.9	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|429217288|ref|YP_007175278.1|	-	8.4e-07	28.5	16.5	1.4e-05	24.7	2.9	2.9	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|429217288|ref|YP_007175278.1|	-	1.5e-06	28.4	9.6	0.00011	22.4	7.7	2.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|429217288|ref|YP_007175278.1|	-	3.2e-06	27.4	11.0	0.0011	19.3	0.4	3.0	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|429217288|ref|YP_007175278.1|	-	5.6e-05	22.5	22.4	9.2e-05	21.8	1.8	2.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|429217288|ref|YP_007175278.1|	-	0.0013	19.2	5.9	0.67	10.5	1.0	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|429217288|ref|YP_007175278.1|	-	0.0062	16.7	19.7	0.014	15.6	2.5	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|429217288|ref|YP_007175278.1|	-	0.025	14.4	14.2	0.27	11.1	2.0	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|429217288|ref|YP_007175278.1|	-	1.6	9.2	13.2	1.7	9.1	2.8	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DNA_pol_B	PF00136.16	gi|429217289|ref|YP_007175279.1|	-	1.8e-88	297.3	5.0	1.8e-88	297.3	3.5	2.1	2	0	0	2	2	2	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|429217289|ref|YP_007175279.1|	-	6.2e-37	127.1	5.1	6.2e-37	127.1	3.5	2.7	4	0	0	4	4	4	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|429217289|ref|YP_007175279.1|	-	1.1e-06	28.6	2.4	5e-06	26.4	0.3	3.1	2	1	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|429217289|ref|YP_007175279.1|	-	6.5e-05	22.5	0.1	0.00023	20.7	0.1	1.9	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
Interferon	PF00143.14	gi|429217289|ref|YP_007175279.1|	-	0.041	13.7	4.7	0.19	11.6	0.1	3.0	3	0	0	3	3	3	0	Interferon	alpha/beta	domain
LIP	PF03583.9	gi|429217291|ref|YP_007175281.1|	-	0.00022	20.5	0.5	0.00044	19.5	0.3	1.4	1	0	0	1	1	1	1	Secretory	lipase
DUF3311	PF11755.3	gi|429217292|ref|YP_007175282.1|	-	5.3e-18	64.3	5.4	6e-18	64.1	3.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
Herpes_UL73	PF03554.8	gi|429217292|ref|YP_007175282.1|	-	0.035	13.9	1.4	0.28	11.0	0.0	2.0	2	0	0	2	2	2	0	UL73	viral	envelope	glycoprotein
DUF4131	PF13567.1	gi|429217292|ref|YP_007175282.1|	-	1.9	7.8	4.7	2.7	7.3	3.3	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
ABC2_membrane_3	PF12698.2	gi|429217292|ref|YP_007175282.1|	-	3.1	6.7	7.2	3.5	6.5	5.0	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
BatA	PF07584.6	gi|429217292|ref|YP_007175282.1|	-	9.9	6.4	8.3	11	6.2	0.5	2.1	1	1	1	2	2	2	0	Aerotolerance	regulator	N-terminal
DUF2283	PF10049.4	gi|429217293|ref|YP_007175283.1|	-	4.4e-06	26.4	0.5	5.9e-06	26.0	0.3	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2283)
Polyhedrin	PF00738.13	gi|429217293|ref|YP_007175283.1|	-	0.098	11.7	0.2	0.11	11.6	0.1	1.1	1	0	0	1	1	1	0	Polyhedrin
ALIX_LYPXL_bnd	PF13949.1	gi|429217294|ref|YP_007175284.1|	-	0.005	15.8	2.9	0.0057	15.6	1.5	1.5	1	1	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
Luteo_P1-P2	PF08467.5	gi|429217294|ref|YP_007175284.1|	-	0.011	14.6	1.7	0.036	12.8	1.1	1.8	1	1	0	1	1	1	0	Luteovirus	RNA	polymerase	P1-P2/replicase
RasGAP_C	PF03836.10	gi|429217294|ref|YP_007175284.1|	-	0.018	14.7	3.7	0.35	10.5	0.9	2.2	2	0	0	2	2	2	0	RasGAP	C-terminus
DUF4546	PF15079.1	gi|429217294|ref|YP_007175284.1|	-	0.02	14.0	0.3	0.031	13.4	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4546)
DUF2151	PF10221.4	gi|429217294|ref|YP_007175284.1|	-	0.034	12.3	1.3	0.047	11.8	0.9	1.1	1	0	0	1	1	1	0	Cell	cycle	and	development	regulator
DUF1399	PF07173.7	gi|429217294|ref|YP_007175284.1|	-	0.066	13.4	2.8	0.1	12.8	1.9	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1399)
Lyase_1	PF00206.15	gi|429217294|ref|YP_007175284.1|	-	0.1	11.7	0.0	0.14	11.3	0.0	1.2	1	0	0	1	1	1	0	Lyase
IlvC	PF01450.14	gi|429217294|ref|YP_007175284.1|	-	0.15	11.9	1.1	0.32	10.9	0.3	1.8	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Wx5_PLAF3D7	PF09688.5	gi|429217294|ref|YP_007175284.1|	-	0.2	11.6	3.0	0.25	11.2	2.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(Wx5_PLAF3D7)
DUF1241	PF06840.6	gi|429217294|ref|YP_007175284.1|	-	0.51	9.5	4.6	0.37	10.0	1.4	1.8	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1241)
Molydop_binding	PF01568.16	gi|429217295|ref|YP_007175285.1|	-	0.0039	16.9	0.1	0.26	11.1	0.0	2.1	1	1	1	2	2	2	2	Molydopterin	dinucleotide	binding	domain
tRNA-synt_2b	PF00587.20	gi|429217296|ref|YP_007175286.1|	-	3.9e-47	160.0	0.1	9.5e-47	158.7	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|429217296|ref|YP_007175286.1|	-	1.2e-22	79.6	0.1	2.8e-22	78.4	0.0	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
Rad50_zn_hook	PF04423.9	gi|429217296|ref|YP_007175286.1|	-	0.011	15.1	1.1	0.027	13.9	0.1	2.1	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
Mur_ligase	PF01225.20	gi|429217296|ref|YP_007175286.1|	-	0.067	13.2	0.0	0.25	11.4	0.0	1.9	2	0	0	2	2	2	0	Mur	ligase	family,	catalytic	domain
DUF164	PF02591.10	gi|429217296|ref|YP_007175286.1|	-	0.2	11.5	0.6	0.96	9.3	0.1	2.2	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
Arginase	PF00491.16	gi|429217297|ref|YP_007175287.1|	-	7.3e-77	258.3	0.0	8.2e-77	258.2	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DNA_RNApol_7kD	PF03604.8	gi|429217298|ref|YP_007175288.1|	-	5.1e-05	22.6	5.0	0.00018	20.8	3.5	2.0	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
OrfB_Zn_ribbon	PF07282.6	gi|429217298|ref|YP_007175288.1|	-	0.00048	19.7	0.3	0.00062	19.3	0.2	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
IBR	PF01485.16	gi|429217298|ref|YP_007175288.1|	-	0.00062	19.5	0.3	0.00075	19.3	0.2	1.1	1	0	0	1	1	1	1	IBR	domain
zf-ribbon_3	PF13248.1	gi|429217298|ref|YP_007175288.1|	-	0.00064	18.8	0.5	0.0024	17.0	0.4	1.8	1	1	0	1	1	1	1	zinc-ribbon	domain
HypA	PF01155.14	gi|429217298|ref|YP_007175288.1|	-	0.0027	17.3	0.1	0.0033	17.0	0.1	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|429217298|ref|YP_007175288.1|	-	0.0031	16.9	2.4	0.087	12.3	1.8	2.3	1	1	1	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|429217298|ref|YP_007175288.1|	-	0.0069	16.1	0.6	0.024	14.4	0.4	1.9	1	1	0	1	1	1	1	Double	zinc	ribbon
TFIIS_C	PF01096.13	gi|429217298|ref|YP_007175288.1|	-	0.0099	15.4	1.0	1.2	8.7	0.1	2.4	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
RNHCP	PF12647.2	gi|429217298|ref|YP_007175288.1|	-	0.012	15.3	0.1	0.015	15.0	0.0	1.1	1	0	0	1	1	1	0	RNHCP	domain
Ogr_Delta	PF04606.7	gi|429217298|ref|YP_007175288.1|	-	0.031	13.9	0.9	1.6	8.4	0.1	2.1	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zf-NADH-PPase	PF09297.6	gi|429217298|ref|YP_007175288.1|	-	0.041	13.4	3.9	0.2	11.1	2.7	2.0	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|429217298|ref|YP_007175288.1|	-	0.064	12.5	1.3	8.2	5.8	0.0	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-CHY	PF05495.7	gi|429217298|ref|YP_007175288.1|	-	0.076	13.1	0.1	0.098	12.8	0.1	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
zf-C3HC4_3	PF13920.1	gi|429217298|ref|YP_007175288.1|	-	0.076	12.6	0.6	0.11	12.2	0.4	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-C2HC5	PF06221.8	gi|429217298|ref|YP_007175288.1|	-	0.09	12.5	0.2	0.14	11.8	0.2	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
zf-CSL	PF05207.8	gi|429217298|ref|YP_007175288.1|	-	0.095	12.2	2.6	0.18	11.3	1.8	1.6	1	1	0	1	1	1	0	CSL	zinc	finger
zinc_ribbon_5	PF13719.1	gi|429217298|ref|YP_007175288.1|	-	0.11	12.0	1.0	0.33	10.5	0.7	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|429217298|ref|YP_007175288.1|	-	0.14	11.8	1.1	0.5	10.1	0.8	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
Cys_rich_CPCC	PF14206.1	gi|429217298|ref|YP_007175288.1|	-	0.17	11.4	2.4	2.4	7.7	0.2	2.2	1	1	1	2	2	2	0	Cysteine-rich	CPCC
UPF0547	PF10571.4	gi|429217298|ref|YP_007175288.1|	-	0.22	11.2	2.2	1.6	8.4	0.1	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Sgf11	PF08209.6	gi|429217298|ref|YP_007175288.1|	-	0.24	10.7	1.9	1.1	8.5	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Zn_Tnp_IS1595	PF12760.2	gi|429217298|ref|YP_007175288.1|	-	0.33	10.8	2.9	2.1	8.2	0.2	2.1	1	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|429217298|ref|YP_007175288.1|	-	0.35	10.1	1.8	0.51	9.5	1.2	1.3	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Rubredoxin	PF00301.15	gi|429217298|ref|YP_007175288.1|	-	0.69	9.8	4.4	18	5.2	0.4	2.2	1	1	1	2	2	2	0	Rubredoxin
A2L_zn_ribbon	PF08792.5	gi|429217298|ref|YP_007175288.1|	-	0.99	8.9	4.3	8.1	6.0	0.6	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-Mss51	PF13824.1	gi|429217298|ref|YP_007175288.1|	-	1.1	9.1	3.1	15	5.4	0.2	2.4	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
SUI1	PF01253.17	gi|429217299|ref|YP_007175289.1|	-	8e-25	86.4	1.4	1e-24	86.1	1.0	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|429217299|ref|YP_007175289.1|	-	0.056	13.6	0.3	0.084	13.1	0.2	1.4	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
MAP	PF03642.8	gi|429217299|ref|YP_007175289.1|	-	0.12	12.5	0.4	0.24	11.6	0.2	1.7	1	1	1	2	2	2	0	MAP	domain
DBI_PRT	PF02277.12	gi|429217300|ref|YP_007175290.1|	-	2.7e-24	85.8	0.0	3.6e-24	85.4	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyltransferase
CbiZ	PF01955.13	gi|429217301|ref|YP_007175291.1|	-	2.8e-35	121.8	0.0	3.6e-35	121.4	0.0	1.1	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
NTP_transf_3	PF12804.2	gi|429217302|ref|YP_007175292.1|	-	6.8e-12	45.7	0.0	9.6e-12	45.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.11	gi|429217302|ref|YP_007175292.1|	-	0.00013	20.9	2.6	0.00015	20.8	1.4	1.4	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
IspD	PF01128.14	gi|429217302|ref|YP_007175292.1|	-	0.016	14.6	0.0	0.048	13.1	0.0	1.8	2	1	0	2	2	2	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
NTP_transferase	PF00483.18	gi|429217302|ref|YP_007175292.1|	-	0.024	13.9	0.0	0.033	13.4	0.0	1.5	1	1	0	1	1	1	0	Nucleotidyl	transferase
Aminotran_1_2	PF00155.16	gi|429217303|ref|YP_007175293.1|	-	2.7e-24	85.8	0.0	3e-24	85.6	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
CobS	PF02654.10	gi|429217304|ref|YP_007175294.1|	-	2e-34	119.1	1.8	2.4e-34	118.9	1.3	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
DUF788	PF05620.6	gi|429217304|ref|YP_007175294.1|	-	9.4	6.0	13.2	1.9	8.3	5.8	2.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF788)
CobD_Cbib	PF03186.8	gi|429217305|ref|YP_007175295.1|	-	3.9e-76	255.9	0.0	4.7e-76	255.6	0.0	1.0	1	0	0	1	1	1	1	CobD/Cbib	protein
DUF373	PF04123.8	gi|429217305|ref|YP_007175295.1|	-	0.24	10.3	8.5	0.15	11.0	2.3	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF373)
Asn_synthase	PF00733.16	gi|429217306|ref|YP_007175296.1|	-	7.2e-20	71.5	0.0	5.4e-18	65.4	0.0	2.1	1	1	0	1	1	1	1	Asparagine	synthase
KaiA	PF07688.7	gi|429217306|ref|YP_007175296.1|	-	0.031	13.5	0.4	1.4	8.1	0.0	2.1	2	0	0	2	2	2	0	KaiA	domain
Rad50_zn_hook	PF04423.9	gi|429217306|ref|YP_007175296.1|	-	0.031	13.7	1.0	0.14	11.6	0.7	2.1	1	0	0	1	1	1	0	Rad50	zinc	hook	motif
QueC	PF06508.8	gi|429217306|ref|YP_007175296.1|	-	0.068	12.4	0.0	0.14	11.4	0.0	1.5	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
Auto_anti-p27	PF06677.7	gi|429217306|ref|YP_007175296.1|	-	2.1	8.1	6.0	15	5.4	2.1	2.6	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF72	PF01904.13	gi|429217307|ref|YP_007175297.1|	-	2.1e-51	174.9	0.2	2.4e-51	174.7	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
DUF1900	PF08954.6	gi|429217307|ref|YP_007175297.1|	-	0.042	13.3	0.2	0.072	12.6	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1900)
Bacteriocin_IIi	PF11758.3	gi|429217307|ref|YP_007175297.1|	-	0.069	12.7	2.7	7.1	6.3	0.0	2.8	3	0	0	3	3	3	0	Aureocin-like	type	II	bacteriocin
DUF2250	PF10007.4	gi|429217308|ref|YP_007175298.1|	-	1.9e-51	171.9	11.5	8.3e-31	105.7	0.8	2.1	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|429217308|ref|YP_007175298.1|	-	6.7e-08	32.1	0.7	0.0019	17.8	0.1	2.4	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|429217308|ref|YP_007175298.1|	-	2.3e-07	30.4	0.0	0.00048	19.7	0.0	2.3	2	0	0	2	2	2	2	MarR	family
MarR	PF01047.17	gi|429217308|ref|YP_007175298.1|	-	9.5e-06	25.2	0.4	7.3e-05	22.3	0.0	2.3	2	0	0	2	2	2	1	MarR	family
DUF4423	PF14394.1	gi|429217308|ref|YP_007175298.1|	-	0.0013	18.3	0.3	0.011	15.3	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_27	PF13463.1	gi|429217308|ref|YP_007175298.1|	-	0.0054	17.0	0.6	1.8	8.9	0.0	2.7	3	0	0	3	3	2	1	Winged	helix	DNA-binding	domain
DUF4393	PF14337.1	gi|429217308|ref|YP_007175298.1|	-	0.0063	15.9	1.7	0.13	11.6	0.2	2.2	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4393)
HTH_24	PF13412.1	gi|429217308|ref|YP_007175298.1|	-	0.011	15.0	2.7	0.31	10.4	0.1	3.1	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
B-block_TFIIIC	PF04182.7	gi|429217308|ref|YP_007175298.1|	-	0.019	14.8	0.4	1.5	8.6	0.0	2.5	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
HTH_CodY	PF08222.6	gi|429217308|ref|YP_007175298.1|	-	0.021	14.1	0.3	0.31	10.4	0.1	2.4	2	0	0	2	2	2	0	CodY	helix-turn-helix	domain
HTH_5	PF01022.15	gi|429217308|ref|YP_007175298.1|	-	0.022	14.4	0.3	1.6	8.4	0.0	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|429217308|ref|YP_007175298.1|	-	0.026	13.9	0.0	0.072	12.5	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|429217308|ref|YP_007175298.1|	-	0.028	14.1	0.2	0.11	12.3	0.1	1.9	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|429217308|ref|YP_007175298.1|	-	0.05	13.5	0.0	0.73	9.8	0.0	2.5	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|429217308|ref|YP_007175298.1|	-	0.073	13.2	0.1	2.9	8.0	0.0	2.4	2	0	0	2	2	2	0	Transcriptional	regulator
FeoC	PF09012.5	gi|429217308|ref|YP_007175298.1|	-	0.099	12.3	0.2	2.1	8.1	0.0	2.4	2	1	0	2	2	2	0	FeoC	like	transcriptional	regulator
HxlR	PF01638.12	gi|429217308|ref|YP_007175298.1|	-	0.11	12.1	0.4	0.27	10.9	0.0	1.9	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
PAP2	PF01569.16	gi|429217309|ref|YP_007175299.1|	-	1.1e-20	73.6	6.8	1.1e-20	73.6	4.7	1.7	3	0	0	3	3	3	1	PAP2	superfamily
PAP2_3	PF14378.1	gi|429217309|ref|YP_007175299.1|	-	2.1e-06	27.4	5.9	3.3e-06	26.7	4.1	1.3	1	0	0	1	1	1	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|429217309|ref|YP_007175299.1|	-	0.001	19.2	4.5	0.001	19.2	3.1	2.8	3	1	0	3	3	3	1	PAP2	superfamily	C-terminal
DUF1212	PF06738.7	gi|429217309|ref|YP_007175299.1|	-	0.018	14.4	6.1	0.11	11.9	0.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1212)
DUF4257	PF14074.1	gi|429217309|ref|YP_007175299.1|	-	0.13	11.8	2.7	5.4	6.7	0.0	2.7	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF4257)
EF-hand_2	PF09068.6	gi|429217309|ref|YP_007175299.1|	-	1.1	9.3	5.7	2.5	8.1	3.9	1.8	1	1	0	1	1	1	0	EF	hand
DUF1097	PF06496.6	gi|429217309|ref|YP_007175299.1|	-	5.7	6.7	12.7	0.2	11.4	0.6	3.0	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1097)
AA_permease_2	PF13520.1	gi|429217310|ref|YP_007175300.1|	-	4.1e-39	134.3	66.7	4.1e-39	134.3	46.2	2.2	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|429217310|ref|YP_007175300.1|	-	3.1e-22	78.5	71.8	5.9e-22	77.6	46.7	2.6	1	1	0	1	1	1	1	Amino	acid	permease
SpoIIIAC	PF06686.6	gi|429217310|ref|YP_007175300.1|	-	0.069	12.9	0.0	0.069	12.9	0.0	4.5	4	0	0	4	4	4	0	Stage	III	sporulation	protein	AC/AD	protein	family
ODV-E18	PF10717.4	gi|429217310|ref|YP_007175300.1|	-	4.6	6.7	8.0	9.6	5.7	0.0	3.1	3	0	0	3	3	3	0	Occlusion-derived	virus	envelope	protein	ODV-E18
Acyl-CoA_dh_1	PF00441.19	gi|429217311|ref|YP_007175301.1|	-	5.3e-45	153.2	3.0	7.9e-45	152.6	2.1	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|429217311|ref|YP_007175301.1|	-	1.7e-32	112.3	0.0	4e-32	111.1	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|429217311|ref|YP_007175301.1|	-	2e-18	65.6	0.0	3.6e-18	64.8	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|429217311|ref|YP_007175301.1|	-	7.5e-15	55.3	0.8	1.3e-14	54.6	0.5	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
HpaB_N	PF11794.3	gi|429217311|ref|YP_007175301.1|	-	0.00012	21.5	0.4	0.0015	17.9	0.3	2.1	1	1	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
NAGLU_N	PF12971.2	gi|429217311|ref|YP_007175301.1|	-	0.086	12.5	0.1	1.3	8.7	0.0	2.5	2	1	0	2	2	2	0	Alpha-N-acetylglucosaminidase	(NAGLU)	N-terminal	domain
DUF2192	PF09958.4	gi|429217312|ref|YP_007175302.1|	-	5.2e-60	202.5	2.3	6.1e-60	202.3	1.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
Hydrolase_like	PF13242.1	gi|429217313|ref|YP_007175303.1|	-	0.15	11.8	0.0	0.17	11.6	0.0	1.2	1	0	0	1	1	1	0	HAD-hyrolase-like
DUF3922	PF13059.1	gi|429217313|ref|YP_007175303.1|	-	0.17	12.0	0.5	0.22	11.7	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3992)
P3A	PF08727.6	gi|429217313|ref|YP_007175303.1|	-	0.38	10.1	2.3	0.95	8.8	1.6	1.8	1	1	0	1	1	1	0	Poliovirus	3A	protein	like
DUF95	PF01944.12	gi|429217314|ref|YP_007175304.1|	-	1.9e-18	66.6	21.7	4.8e-18	65.3	15.1	1.5	1	1	0	1	1	1	1	Integral	membrane	protein	DUF95
DHBP_synthase	PF00926.14	gi|429217316|ref|YP_007175306.1|	-	2.5e-53	180.1	0.0	3.1e-53	179.9	0.0	1.1	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DMRL_synthase	PF00885.14	gi|429217317|ref|YP_007175307.1|	-	2.6e-13	49.8	0.0	3.1e-13	49.5	0.0	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
EamA	PF00892.15	gi|429217318|ref|YP_007175308.1|	-	9.4e-29	100.0	44.9	2.6e-15	56.5	12.3	2.4	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|429217318|ref|YP_007175308.1|	-	2.7e-06	27.5	32.2	0.0029	17.8	8.0	2.9	2	1	0	2	2	2	2	Multidrug	resistance	efflux	transporter
DUF2286	PF10051.4	gi|429217319|ref|YP_007175309.1|	-	4.8e-45	152.6	4.0	5.3e-45	152.5	2.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
MarC	PF01914.12	gi|429217320|ref|YP_007175310.1|	-	4.7e-32	110.7	13.9	5.3e-32	110.5	9.6	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
eIF-5a	PF01287.15	gi|429217321|ref|YP_007175311.1|	-	7.3e-12	45.0	0.2	1.4e-11	44.1	0.2	1.5	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|429217321|ref|YP_007175311.1|	-	1.8e-06	27.7	0.1	4.2e-06	26.5	0.0	1.7	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
EFP	PF01132.15	gi|429217321|ref|YP_007175311.1|	-	0.0098	15.5	0.0	0.024	14.3	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	OB	domain
KOW	PF00467.24	gi|429217321|ref|YP_007175311.1|	-	0.045	13.5	0.6	0.045	13.5	0.4	1.9	2	0	0	2	2	2	0	KOW	motif
MacB_PCD	PF12704.2	gi|429217321|ref|YP_007175311.1|	-	0.1	12.1	0.0	0.18	11.3	0.0	1.5	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
MMR_HSR1	PF01926.18	gi|429217322|ref|YP_007175312.1|	-	4.3e-13	49.2	0.4	1.3e-08	34.8	0.0	2.3	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
DUF258	PF03193.11	gi|429217322|ref|YP_007175312.1|	-	6.6e-06	25.4	0.0	1.5e-05	24.2	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
GTP_EFTU	PF00009.22	gi|429217322|ref|YP_007175312.1|	-	1.2e-05	24.8	0.0	4.2e-05	23.0	0.0	1.9	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.18	gi|429217322|ref|YP_007175312.1|	-	0.00018	21.3	3.1	0.016	15.0	0.2	2.9	2	1	1	3	3	3	2	Dynamin	family
FeoB_N	PF02421.13	gi|429217322|ref|YP_007175312.1|	-	0.00051	19.3	0.2	0.0034	16.6	0.0	2.0	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|429217322|ref|YP_007175312.1|	-	0.0026	18.2	0.3	0.92	10.0	0.0	2.4	2	0	0	2	2	2	2	Miro-like	protein
cobW	PF02492.14	gi|429217322|ref|YP_007175312.1|	-	0.0086	15.5	0.7	0.016	14.6	0.1	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|429217322|ref|YP_007175312.1|	-	0.019	14.9	0.0	0.047	13.6	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
TFIIB	PF00382.14	gi|429217323|ref|YP_007175313.1|	-	1.5e-38	130.4	2.2	3.8e-19	68.2	0.1	2.4	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|429217323|ref|YP_007175313.1|	-	1.9e-05	23.8	0.1	3.2e-05	23.1	0.0	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4_2	PF08281.7	gi|429217323|ref|YP_007175313.1|	-	4.1e-05	22.9	0.6	0.37	10.3	0.0	3.2	3	0	0	3	3	3	2	Sigma-70,	region	4
Sigma70_r4	PF04545.11	gi|429217323|ref|YP_007175313.1|	-	9.8e-05	21.5	0.1	0.029	13.6	0.0	2.9	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_AsnC-type	PF13404.1	gi|429217323|ref|YP_007175313.1|	-	0.0048	16.4	0.2	0.026	14.0	0.0	2.3	3	0	0	3	3	3	1	AsnC-type	helix-turn-helix	domain
Cyclin_C	PF02984.14	gi|429217323|ref|YP_007175313.1|	-	0.0055	16.6	0.0	0.14	12.0	0.0	2.4	2	0	0	2	2	2	1	Cyclin,	C-terminal	domain
UPF0253	PF06786.7	gi|429217323|ref|YP_007175313.1|	-	0.012	15.6	0.1	0.042	13.9	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0253)
TraB	PF01963.12	gi|429217323|ref|YP_007175313.1|	-	0.024	14.0	0.1	0.49	9.7	0.0	2.2	2	0	0	2	2	2	0	TraB	family
HTH_23	PF13384.1	gi|429217323|ref|YP_007175313.1|	-	0.037	13.6	1.9	0.53	9.9	0.2	2.7	2	0	0	2	2	2	0	Homeodomain-like	domain
Transglut_core	PF01841.14	gi|429217323|ref|YP_007175313.1|	-	0.048	13.8	0.0	0.1	12.8	0.0	1.5	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
HTH_31	PF13560.1	gi|429217323|ref|YP_007175313.1|	-	0.14	12.3	2.3	0.59	10.3	0.4	2.9	2	1	1	3	3	3	0	Helix-turn-helix	domain
AFOR_C	PF01314.13	gi|429217324|ref|YP_007175314.1|	-	2.8e-114	381.7	0.1	3.4e-114	381.4	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|429217324|ref|YP_007175314.1|	-	8.2e-75	250.5	0.0	1.3e-74	249.9	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DUF2153	PF09921.4	gi|429217325|ref|YP_007175315.1|	-	4.5e-47	158.8	1.2	5.2e-47	158.5	0.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
RE_HindIII	PF09518.5	gi|429217325|ref|YP_007175315.1|	-	0.016	14.1	0.2	0.017	14.0	0.1	1.2	1	0	0	1	1	1	0	HindIII	restriction	endonuclease
OSCP	PF00213.13	gi|429217325|ref|YP_007175315.1|	-	0.055	13.3	0.0	0.081	12.7	0.0	1.4	1	1	0	1	1	1	0	ATP	synthase	delta	(OSCP)	subunit
DUF1912	PF08930.5	gi|429217325|ref|YP_007175315.1|	-	0.088	12.8	0.5	0.94	9.6	0.0	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1912)
UPF0728	PF15092.1	gi|429217325|ref|YP_007175315.1|	-	0.11	12.4	0.0	0.2	11.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0728
TFIIA_gamma_N	PF02268.11	gi|429217325|ref|YP_007175315.1|	-	0.14	11.7	0.2	3	7.5	0.0	2.8	3	1	0	3	3	3	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
Ribosomal_S25	PF03297.10	gi|429217326|ref|YP_007175316.1|	-	1.6e-06	28.0	0.7	1.7e-06	28.0	0.5	1.1	1	0	0	1	1	1	1	S25	ribosomal	protein
HTH_DeoR	PF08220.7	gi|429217326|ref|YP_007175316.1|	-	0.002	17.5	0.0	0.0032	16.9	0.0	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|429217326|ref|YP_007175316.1|	-	0.0035	16.6	0.1	0.0068	15.7	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|429217326|ref|YP_007175316.1|	-	0.0047	16.8	0.1	0.0072	16.2	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.1	gi|429217326|ref|YP_007175316.1|	-	0.012	15.7	0.2	0.77	9.9	0.1	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
EAP30	PF04157.11	gi|429217326|ref|YP_007175316.1|	-	0.029	13.5	0.0	0.035	13.2	0.0	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
TrmB	PF01978.14	gi|429217326|ref|YP_007175316.1|	-	0.031	14.0	0.2	0.043	13.5	0.2	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|429217326|ref|YP_007175316.1|	-	0.042	13.8	0.0	0.054	13.5	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|429217326|ref|YP_007175316.1|	-	0.05	13.1	0.0	0.071	12.7	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Rrf2	PF02082.15	gi|429217326|ref|YP_007175316.1|	-	0.052	13.6	0.1	0.13	12.3	0.1	1.7	1	1	1	2	2	2	0	Transcriptional	regulator
HTH_Tnp_4	PF13613.1	gi|429217326|ref|YP_007175316.1|	-	0.053	13.0	0.0	0.074	12.5	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
MarR	PF01047.17	gi|429217326|ref|YP_007175316.1|	-	0.054	13.2	0.0	0.18	11.5	0.0	1.8	1	1	1	2	2	2	0	MarR	family
HTH_Crp_2	PF13545.1	gi|429217326|ref|YP_007175316.1|	-	0.055	13.2	0.0	0.074	12.8	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
GntR	PF00392.16	gi|429217326|ref|YP_007175316.1|	-	0.071	12.5	0.1	0.1	12.0	0.1	1.4	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DAO	PF01266.19	gi|429217327|ref|YP_007175317.1|	-	8e-47	159.8	0.0	9.3e-47	159.6	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|429217327|ref|YP_007175317.1|	-	8.6e-06	25.6	0.0	1.8e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|429217327|ref|YP_007175317.1|	-	2.1e-05	24.7	0.0	0.00023	21.2	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|429217327|ref|YP_007175317.1|	-	0.0043	16.1	0.0	0.046	12.8	0.0	2.1	2	0	0	2	2	2	1	Thi4	family
NAD_binding_9	PF13454.1	gi|429217327|ref|YP_007175317.1|	-	0.0048	16.6	0.0	0.0077	16.0	0.0	1.3	1	0	0	1	1	1	1	FAD-NAD(P)-binding
Pyr_redox_2	PF07992.9	gi|429217327|ref|YP_007175317.1|	-	0.0049	16.7	0.0	0.017	15.0	0.0	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|429217327|ref|YP_007175317.1|	-	0.017	13.9	0.0	0.046	12.5	0.0	1.6	2	0	0	2	2	2	0	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|429217327|ref|YP_007175317.1|	-	0.027	13.3	0.0	0.039	12.8	0.0	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
NPCBM	PF08305.6	gi|429217327|ref|YP_007175317.1|	-	0.11	12.4	0.0	0.49	10.3	0.0	2.0	2	0	0	2	2	2	0	NPCBM/NEW2	domain
Xpo1	PF08389.7	gi|429217328|ref|YP_007175318.1|	-	0.03	14.2	0.9	6.1	6.7	0.1	3.6	4	0	0	4	4	4	0	Exportin	1-like	protein
Aldolase	PF01081.14	gi|429217328|ref|YP_007175318.1|	-	0.12	11.5	0.0	0.25	10.4	0.0	1.6	1	0	0	1	1	1	0	KDPG	and	KHG	aldolase
SurE	PF01975.12	gi|429217329|ref|YP_007175319.1|	-	6.8e-49	165.8	0.0	8.7e-49	165.4	0.0	1.1	1	0	0	1	1	1	1	Survival	protein	SurE
Glyco_trans_4_2	PF13477.1	gi|429217329|ref|YP_007175319.1|	-	0.00082	19.2	0.2	0.018	14.8	0.0	2.4	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
bact-PGI_C	PF10432.4	gi|429217331|ref|YP_007175321.1|	-	1.1e-30	106.4	0.0	2.2e-30	105.3	0.0	1.5	2	0	0	2	2	2	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|429217331|ref|YP_007175321.1|	-	4e-08	32.9	0.3	2e-07	30.6	0.1	2.3	1	1	1	2	2	2	1	SIS	domain
SIS_2	PF13580.1	gi|429217331|ref|YP_007175321.1|	-	0.00022	20.9	0.0	0.0026	17.4	0.0	2.5	3	0	0	3	3	3	1	SIS	domain
HD	PF01966.17	gi|429217332|ref|YP_007175322.1|	-	2.7e-08	33.8	0.8	2.7e-08	33.8	0.5	2.8	3	1	0	3	3	3	1	HD	domain
HDOD	PF08668.7	gi|429217332|ref|YP_007175322.1|	-	0.0011	18.2	0.1	0.0057	15.9	0.0	2.1	2	0	0	2	2	2	1	HDOD	domain
HEM4	PF02602.10	gi|429217333|ref|YP_007175323.1|	-	6.5e-31	107.3	0.0	8e-31	107.0	0.0	1.0	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
AAA_14	PF13173.1	gi|429217333|ref|YP_007175323.1|	-	0.23	11.3	2.5	0.35	10.7	0.8	1.9	1	1	1	2	2	2	0	AAA	domain
TP_methylase	PF00590.15	gi|429217334|ref|YP_007175324.1|	-	9e-50	169.2	0.0	1e-49	169.1	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Porphobil_deam	PF01379.15	gi|429217335|ref|YP_007175325.1|	-	5.9e-63	211.6	0.0	7.5e-63	211.3	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|429217335|ref|YP_007175325.1|	-	1.6e-09	37.6	0.0	3.4e-09	36.6	0.0	1.6	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
GSH-S_ATP	PF02955.11	gi|429217335|ref|YP_007175325.1|	-	0.0027	16.8	1.1	0.18	10.9	0.0	2.6	3	0	0	3	3	3	2	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
DUF2591	PF10765.4	gi|429217335|ref|YP_007175325.1|	-	0.049	13.8	0.0	0.085	13.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2591)
Aminotran_3	PF00202.16	gi|429217336|ref|YP_007175326.1|	-	1.1e-65	221.7	0.0	1.5e-65	221.2	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|429217336|ref|YP_007175326.1|	-	4.4e-05	22.5	0.0	6.3e-05	22.0	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
RNA_pol_Rpb1_3	PF04983.13	gi|429217336|ref|YP_007175326.1|	-	0.051	13.2	0.3	0.6	9.8	0.2	2.5	2	1	0	2	2	2	0	RNA	polymerase	Rpb1,	domain	3
PBP_like	PF12727.2	gi|429217338|ref|YP_007175328.1|	-	1.5e-53	180.6	0.0	2.7e-53	179.7	0.0	1.4	1	0	0	1	1	1	1	PBP	superfamily	domain
MoeA_N	PF03453.12	gi|429217338|ref|YP_007175328.1|	-	2.6e-52	176.4	0.7	4.7e-52	175.6	0.5	1.4	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|429217338|ref|YP_007175328.1|	-	3.1e-27	94.7	0.0	7.3e-27	93.5	0.0	1.6	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|429217338|ref|YP_007175328.1|	-	1.2e-11	44.3	0.0	2.6e-11	43.2	0.0	1.6	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
Phosphonate-bd	PF12974.2	gi|429217338|ref|YP_007175328.1|	-	9.4e-06	25.1	0.0	3.1e-05	23.4	0.0	1.8	2	0	0	2	2	2	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_11	PF13531.1	gi|429217338|ref|YP_007175328.1|	-	0.00015	21.4	0.0	0.00037	20.1	0.0	1.6	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
OpuAC	PF04069.7	gi|429217338|ref|YP_007175328.1|	-	0.00089	18.6	0.0	0.0059	15.9	0.0	2.1	2	0	0	2	2	2	1	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
PBP_like_2	PF12849.2	gi|429217338|ref|YP_007175328.1|	-	0.085	12.2	0.0	1.2	8.5	0.0	2.5	2	1	0	2	2	2	0	PBP	superfamily	domain
Lipoprotein_9	PF03180.9	gi|429217338|ref|YP_007175328.1|	-	0.12	11.2	2.0	3.1	6.6	0.1	2.9	3	0	0	3	3	3	0	NLPA	lipoprotein
RNA_pol_L_2	PF13656.1	gi|429217339|ref|YP_007175329.1|	-	4.6e-21	74.0	0.5	6.9e-21	73.4	0.3	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|429217339|ref|YP_007175329.1|	-	9.8e-07	27.8	0.0	1.3e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
PARP_reg	PF02877.9	gi|429217339|ref|YP_007175329.1|	-	0.033	13.8	0.6	0.04	13.5	0.4	1.2	1	0	0	1	1	1	0	Poly(ADP-ribose)	polymerase,	regulatory	domain
DUF2067	PF09840.4	gi|429217340|ref|YP_007175330.1|	-	2.9e-15	56.2	1.3	3.3e-15	56.0	0.9	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
SLS	PF14611.1	gi|429217340|ref|YP_007175330.1|	-	0.021	14.2	4.2	0.52	9.6	0.4	2.1	1	1	1	2	2	2	0	Mitochondrial	inner-membrane-bound	regulator
Ndc80_HEC	PF03801.8	gi|429217340|ref|YP_007175330.1|	-	0.037	13.4	0.7	0.061	12.7	0.5	1.5	1	1	0	1	1	1	0	HEC/Ndc80p	family
ECR1_N	PF14382.1	gi|429217341|ref|YP_007175331.1|	-	5.1e-08	32.0	0.1	2.1e-07	30.0	0.0	2.0	2	0	0	2	2	2	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
EXOSC1	PF10447.4	gi|429217341|ref|YP_007175331.1|	-	3.3e-05	23.7	0.2	9.8e-05	22.2	0.1	1.8	1	1	0	1	1	1	1	Exosome	component	EXOSC1/CSL4
A2L_zn_ribbon	PF08792.5	gi|429217341|ref|YP_007175331.1|	-	6.4e-05	22.2	3.0	0.00014	21.2	2.1	1.5	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|429217341|ref|YP_007175331.1|	-	0.00025	20.6	0.7	0.00047	19.7	0.5	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS91	PF14319.1	gi|429217341|ref|YP_007175331.1|	-	0.00053	19.4	0.0	0.00079	18.9	0.0	1.2	1	0	0	1	1	1	1	Transposase	zinc-binding	domain
zf-ribbon_3	PF13248.1	gi|429217341|ref|YP_007175331.1|	-	0.012	14.7	1.7	0.03	13.5	1.2	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|429217341|ref|YP_007175331.1|	-	0.014	15.0	3.9	0.05	13.3	2.7	1.8	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DZR	PF12773.2	gi|429217341|ref|YP_007175331.1|	-	0.016	15.0	0.7	0.026	14.3	0.5	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
TerY-C	PF15616.1	gi|429217341|ref|YP_007175331.1|	-	0.025	14.5	0.3	0.04	13.8	0.2	1.3	1	0	0	1	1	1	0	TerY-C	metal	binding	domain
S1	PF00575.18	gi|429217341|ref|YP_007175331.1|	-	0.031	14.3	0.1	0.51	10.4	0.0	2.5	2	0	0	2	2	2	0	S1	RNA	binding	domain
HypA	PF01155.14	gi|429217341|ref|YP_007175331.1|	-	0.032	13.9	0.2	0.055	13.1	0.2	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-C2HC5	PF06221.8	gi|429217341|ref|YP_007175331.1|	-	0.033	13.9	1.1	0.055	13.2	0.7	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
DUF2318	PF10080.4	gi|429217341|ref|YP_007175331.1|	-	0.037	13.8	0.2	0.066	12.9	0.2	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
zinc_ribbon_4	PF13717.1	gi|429217341|ref|YP_007175331.1|	-	0.049	13.3	3.4	0.17	11.5	0.1	2.4	1	1	1	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|429217341|ref|YP_007175331.1|	-	0.056	13.4	2.2	0.12	12.3	1.5	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|429217341|ref|YP_007175331.1|	-	0.057	13.0	3.5	0.2	11.2	0.1	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|429217341|ref|YP_007175331.1|	-	0.11	12.2	0.8	0.22	11.2	0.6	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Auto_anti-p27	PF06677.7	gi|429217341|ref|YP_007175331.1|	-	0.12	12.1	2.4	0.2	11.4	1.7	1.3	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DNA_RNApol_7kD	PF03604.8	gi|429217341|ref|YP_007175331.1|	-	0.16	11.4	3.3	0.35	10.3	2.3	1.5	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C3HC4_3	PF13920.1	gi|429217341|ref|YP_007175331.1|	-	0.17	11.5	1.6	0.29	10.8	1.1	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
TF_Zn_Ribbon	PF08271.7	gi|429217341|ref|YP_007175331.1|	-	2.2	7.6	5.1	13	5.1	0.5	2.4	1	1	1	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|429217341|ref|YP_007175331.1|	-	2.3	7.8	7.6	6.5	6.3	1.7	2.2	1	1	0	2	2	2	0	zinc-ribbon	domain
Methyltransf_26	PF13659.1	gi|429217342|ref|YP_007175332.1|	-	4.5e-07	29.8	0.0	9.3e-07	28.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|429217342|ref|YP_007175332.1|	-	2e-05	24.1	0.0	2.6e-05	23.7	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.9	gi|429217342|ref|YP_007175332.1|	-	0.00066	19.0	0.0	0.00099	18.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|429217342|ref|YP_007175332.1|	-	0.0021	17.2	0.0	0.0022	17.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_15	PF09445.5	gi|429217342|ref|YP_007175332.1|	-	0.013	15.0	0.0	0.017	14.6	0.0	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
DOT1	PF08123.8	gi|429217342|ref|YP_007175332.1|	-	0.013	14.8	0.0	0.019	14.3	0.0	1.3	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Methyltransf_18	PF12847.2	gi|429217342|ref|YP_007175332.1|	-	0.02	15.4	0.0	0.03	14.9	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
UPF0020	PF01170.13	gi|429217342|ref|YP_007175332.1|	-	0.05	13.1	0.0	0.066	12.7	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
MetW	PF07021.7	gi|429217342|ref|YP_007175332.1|	-	0.065	12.6	0.1	0.11	11.8	0.0	1.6	1	1	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Diphthamide_syn	PF01866.12	gi|429217343|ref|YP_007175333.1|	-	7.1e-68	229.0	0.0	8.4e-68	228.8	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Ribosomal_L16	PF00252.13	gi|429217344|ref|YP_007175334.1|	-	6.9e-31	106.7	0.1	7.9e-31	106.5	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Capsule_synth	PF05159.9	gi|429217344|ref|YP_007175334.1|	-	0.00038	20.0	0.0	0.00062	19.3	0.0	1.3	1	0	0	1	1	1	1	Capsule	polysaccharide	biosynthesis	protein
Acyl-CoA_dh_1	PF00441.19	gi|429217345|ref|YP_007175335.1|	-	5.3e-30	104.5	0.1	7.2e-30	104.0	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|429217345|ref|YP_007175335.1|	-	1.1e-10	40.8	0.0	2.1e-10	39.9	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|429217345|ref|YP_007175335.1|	-	5.1e-10	39.7	0.0	8.5e-10	38.9	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|429217345|ref|YP_007175335.1|	-	0.079	13.5	0.0	0.25	11.9	0.0	1.9	2	0	0	2	2	2	0	Acyl-CoA	dehydrogenase,	N-terminal	domain
TrmB	PF01978.14	gi|429217346|ref|YP_007175336.1|	-	6.7e-05	22.5	0.4	9.9e-05	21.9	0.2	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|429217346|ref|YP_007175336.1|	-	7.6e-05	22.0	0.0	0.00019	20.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|429217346|ref|YP_007175336.1|	-	9.4e-05	22.0	0.1	0.00014	21.4	0.1	1.2	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|429217346|ref|YP_007175336.1|	-	0.00017	21.0	0.7	0.00023	20.5	0.4	1.3	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|429217346|ref|YP_007175336.1|	-	0.00029	20.4	0.1	0.00053	19.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_DeoR	PF08220.7	gi|429217346|ref|YP_007175336.1|	-	0.019	14.4	0.2	0.042	13.3	0.0	1.7	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HTH_11	PF08279.7	gi|429217346|ref|YP_007175336.1|	-	0.027	14.1	0.0	0.048	13.3	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
Rrf2	PF02082.15	gi|429217346|ref|YP_007175336.1|	-	0.029	14.4	0.0	0.04	14.0	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_IclR	PF09339.5	gi|429217346|ref|YP_007175336.1|	-	0.033	13.7	0.1	0.087	12.4	0.0	1.7	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_9	PF08221.6	gi|429217346|ref|YP_007175336.1|	-	0.046	13.6	0.1	0.082	12.7	0.0	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_27	PF13463.1	gi|429217346|ref|YP_007175336.1|	-	0.052	13.8	0.1	0.074	13.3	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
RICTOR_N	PF14664.1	gi|429217346|ref|YP_007175336.1|	-	0.068	11.7	0.0	0.068	11.7	0.0	1.2	1	0	0	1	1	1	0	Rapamycin-insensitive	companion	of	mTOR,	N-term
Mga	PF05043.8	gi|429217346|ref|YP_007175336.1|	-	0.07	13.4	0.0	0.11	12.7	0.0	1.5	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
MarR	PF01047.17	gi|429217346|ref|YP_007175336.1|	-	0.07	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	MarR	family
F-112	PF09645.5	gi|429217346|ref|YP_007175336.1|	-	0.11	12.3	0.0	0.15	11.9	0.0	1.3	1	1	0	1	1	1	0	F-112	protein
Peptidase_U32	PF01136.14	gi|429217346|ref|YP_007175336.1|	-	0.13	11.1	0.0	0.14	11.1	0.0	1.1	1	0	0	1	1	1	0	Peptidase	family	U32
TIM	PF00121.13	gi|429217347|ref|YP_007175337.1|	-	1.6e-22	79.7	2.3	3.9e-13	49.0	0.1	2.0	1	1	1	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|429217347|ref|YP_007175337.1|	-	2.4e-09	36.6	1.0	3.8e-09	35.9	0.7	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.15	gi|429217347|ref|YP_007175337.1|	-	7.4e-07	27.9	0.5	0.00018	20.1	0.2	2.2	2	0	0	2	2	2	2	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|429217347|ref|YP_007175337.1|	-	0.0003	20.1	0.8	0.0016	17.7	0.0	2.3	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|429217347|ref|YP_007175337.1|	-	0.003	16.5	0.1	0.0054	15.7	0.0	1.4	1	1	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Taxilin	PF09728.4	gi|429217347|ref|YP_007175337.1|	-	0.0044	16.1	0.0	0.006	15.7	0.0	1.2	1	0	0	1	1	1	1	Myosin-like	coiled-coil	protein
DUF561	PF04481.7	gi|429217347|ref|YP_007175337.1|	-	0.0051	15.7	0.9	0.0051	15.7	0.6	2.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF561)
PcrB	PF01884.12	gi|429217347|ref|YP_007175337.1|	-	0.008	15.4	0.4	0.02	14.1	0.2	1.7	1	1	0	1	1	1	1	PcrB	family
NMO	PF03060.10	gi|429217347|ref|YP_007175337.1|	-	0.0087	15.2	0.1	0.014	14.6	0.1	1.2	1	0	0	1	1	1	1	Nitronate	monooxygenase
IGPS	PF00218.16	gi|429217347|ref|YP_007175337.1|	-	0.013	14.6	0.0	0.015	14.3	0.0	1.3	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
BtpA	PF03437.10	gi|429217347|ref|YP_007175337.1|	-	0.017	14.3	0.3	0.06	12.5	0.2	1.9	1	1	0	1	1	1	0	BtpA	family
DHO_dh	PF01180.16	gi|429217347|ref|YP_007175337.1|	-	0.023	13.6	0.2	0.034	13.1	0.1	1.4	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
FMN_dh	PF01070.13	gi|429217347|ref|YP_007175337.1|	-	0.039	12.7	0.1	0.059	12.2	0.0	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|429217347|ref|YP_007175337.1|	-	0.042	12.7	0.1	0.062	12.1	0.1	1.3	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.12	gi|429217347|ref|YP_007175337.1|	-	0.13	11.1	0.6	0.18	10.6	0.0	1.5	2	0	0	2	2	2	0	Conserved	region	in	glutamate	synthase
FBPase_3	PF01950.11	gi|429217348|ref|YP_007175338.1|	-	1.4e-186	619.8	0.0	1.6e-186	619.6	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
DUF46	PF01864.12	gi|429217349|ref|YP_007175339.1|	-	2.6e-47	160.9	8.3	8.9e-47	159.2	5.7	1.6	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|429217349|ref|YP_007175339.1|	-	5.2e-07	29.5	4.5	5.2e-07	29.5	3.1	1.9	1	1	1	2	2	2	1	Cytidylyltransferase	family
SDF	PF00375.13	gi|429217349|ref|YP_007175339.1|	-	0.22	10.2	2.8	0.33	9.6	1.9	1.3	1	0	0	1	1	1	0	Sodium:dicarboxylate	symporter	family
5TM-5TMR_LYT	PF07694.7	gi|429217349|ref|YP_007175339.1|	-	0.41	9.9	6.4	0.68	9.2	4.5	1.6	1	1	0	1	1	1	0	5TMR	of	5TMR-LYT
AAA	PF00004.24	gi|429217350|ref|YP_007175340.1|	-	7.4e-09	35.9	0.0	9.5e-09	35.5	0.0	1.1	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KTI12	PF08433.5	gi|429217350|ref|YP_007175340.1|	-	3.4e-07	29.7	0.0	4.7e-07	29.2	0.0	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_25	PF13481.1	gi|429217350|ref|YP_007175340.1|	-	2e-06	27.3	0.0	0.012	14.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|429217350|ref|YP_007175340.1|	-	1.2e-05	26.1	0.0	1.4e-05	25.8	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|429217350|ref|YP_007175340.1|	-	1.5e-05	24.9	0.3	2e-05	24.4	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|429217350|ref|YP_007175340.1|	-	2e-05	24.0	0.0	6.2e-05	22.4	0.0	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_22	PF13401.1	gi|429217350|ref|YP_007175340.1|	-	0.00017	21.7	0.1	0.00032	20.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|429217350|ref|YP_007175340.1|	-	0.00023	21.2	0.0	0.00028	20.9	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|429217350|ref|YP_007175340.1|	-	0.00023	20.9	0.2	0.00034	20.4	0.2	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_24	PF13479.1	gi|429217350|ref|YP_007175340.1|	-	0.0012	18.4	0.1	0.0018	17.9	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|429217350|ref|YP_007175340.1|	-	0.0015	18.8	0.0	0.0023	18.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|429217350|ref|YP_007175340.1|	-	0.0068	15.5	0.3	0.62	9.1	0.1	2.1	1	1	0	2	2	2	1	KaiC
RNA_helicase	PF00910.17	gi|429217350|ref|YP_007175340.1|	-	0.0071	16.5	0.2	0.018	15.1	0.1	1.8	1	1	0	1	1	1	1	RNA	helicase
AAA_2	PF07724.9	gi|429217350|ref|YP_007175340.1|	-	0.012	15.5	0.0	0.016	15.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
PhoH	PF02562.11	gi|429217350|ref|YP_007175340.1|	-	0.016	14.4	0.0	0.067	12.4	0.0	1.9	2	0	0	2	2	2	0	PhoH-like	protein
AAA_19	PF13245.1	gi|429217350|ref|YP_007175340.1|	-	0.028	14.1	0.0	0.046	13.4	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
TIP49	PF06068.8	gi|429217350|ref|YP_007175340.1|	-	0.029	13.1	0.0	0.034	12.8	0.0	1.2	1	0	0	1	1	1	0	TIP49	C-terminus
Bac_DnaA	PF00308.13	gi|429217350|ref|YP_007175340.1|	-	0.03	13.9	0.4	0.051	13.2	0.3	1.4	1	1	0	1	1	1	0	Bacterial	dnaA	protein
DUF2533	PF10752.4	gi|429217350|ref|YP_007175340.1|	-	0.031	14.5	0.1	0.06	13.6	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2533)
DUF3603	PF12227.3	gi|429217350|ref|YP_007175340.1|	-	0.055	12.6	0.1	0.071	12.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3603)
Ribosomal_L18e	PF00828.14	gi|429217351|ref|YP_007175341.1|	-	7.4e-27	94.2	4.1	9.9e-27	93.8	2.9	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|429217352|ref|YP_007175342.1|	-	1.1e-08	34.5	0.0	2.3e-08	33.4	0.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5_C	PF03719.10	gi|429217353|ref|YP_007175343.1|	-	9e-26	88.9	0.1	1.5e-25	88.2	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|429217353|ref|YP_007175343.1|	-	8.8e-22	76.6	2.2	1.6e-21	75.7	0.6	2.0	2	0	0	2	2	2	1	Ribosomal	protein	S5,	N-terminal	domain
Dodecin	PF07311.7	gi|429217353|ref|YP_007175343.1|	-	0.089	12.8	0.2	6.3	6.9	0.1	2.6	2	0	0	2	2	2	0	Dodecin
Ribosomal_L18p	PF00861.17	gi|429217354|ref|YP_007175344.1|	-	2.2e-33	115.0	0.9	2.9e-33	114.5	0.6	1.2	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|429217354|ref|YP_007175344.1|	-	4.6e-07	30.3	0.0	9.2e-07	29.3	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.15	gi|429217355|ref|YP_007175345.1|	-	2.3e-49	166.9	7.9	2.5e-49	166.8	5.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
HTH_17	PF12728.2	gi|429217355|ref|YP_007175345.1|	-	0.016	15.4	5.5	3.7	7.8	0.5	3.9	3	1	1	4	4	4	0	Helix-turn-helix	domain
MEDS	PF14417.1	gi|429217355|ref|YP_007175345.1|	-	0.026	13.5	0.0	0.036	13.1	0.0	1.2	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
DUF664	PF04978.7	gi|429217355|ref|YP_007175345.1|	-	0.12	12.6	0.0	0.16	12.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF664)
Ribosomal_L32e	PF01655.13	gi|429217356|ref|YP_007175346.1|	-	1.7e-35	121.3	0.9	2.5e-35	120.8	0.2	1.5	1	1	1	2	2	2	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.18	gi|429217357|ref|YP_007175347.1|	-	3.4e-27	94.7	7.5	4e-15	56.0	1.0	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
DUF1942	PF09167.6	gi|429217357|ref|YP_007175347.1|	-	0.062	13.0	0.0	0.092	12.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1942)
CYTH	PF01928.16	gi|429217359|ref|YP_007175349.1|	-	1.3e-26	93.4	0.4	1.5e-26	93.1	0.3	1.0	1	0	0	1	1	1	1	CYTH	domain
KID	PF02524.9	gi|429217359|ref|YP_007175349.1|	-	0.17	12.0	1.9	2.6	8.5	1.3	3.2	1	0	0	1	1	1	0	KID	repeat
AAA	PF00004.24	gi|429217360|ref|YP_007175350.1|	-	2.7e-101	334.9	0.0	2.4e-50	170.1	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|429217360|ref|YP_007175350.1|	-	4e-24	84.3	0.1	2.3e-23	81.9	0.1	2.4	3	0	0	3	3	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.9	gi|429217360|ref|YP_007175350.1|	-	1.6e-16	60.6	0.0	1.6e-08	34.6	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|429217360|ref|YP_007175350.1|	-	4.2e-16	58.7	0.0	1.5e-08	33.9	0.0	2.6	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_5	PF07728.9	gi|429217360|ref|YP_007175350.1|	-	2.4e-13	50.0	0.6	1.3e-06	28.1	0.0	3.8	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|429217360|ref|YP_007175350.1|	-	8e-13	48.6	0.3	4.5e-05	23.5	0.1	3.7	2	2	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|429217360|ref|YP_007175350.1|	-	1e-12	48.4	0.0	3.8e-06	27.0	0.0	3.0	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|429217360|ref|YP_007175350.1|	-	2.1e-12	47.9	0.1	9.5e-06	26.4	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|429217360|ref|YP_007175350.1|	-	3.1e-12	46.5	0.0	1.7e-05	24.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|429217360|ref|YP_007175350.1|	-	1.2e-11	44.0	0.2	5.1e-05	22.1	0.0	3.1	3	0	0	3	3	2	2	TIP49	C-terminus
AAA_14	PF13173.1	gi|429217360|ref|YP_007175350.1|	-	5.4e-11	42.5	0.0	2e-05	24.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
CDC48_2	PF02933.12	gi|429217360|ref|YP_007175350.1|	-	3.6e-10	39.3	1.2	1e-09	37.8	0.5	2.0	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
Zeta_toxin	PF06414.7	gi|429217360|ref|YP_007175350.1|	-	1.1e-09	37.6	0.0	0.00053	19.1	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|429217360|ref|YP_007175350.1|	-	2.6e-09	36.7	0.6	0.0024	17.3	0.1	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|429217360|ref|YP_007175350.1|	-	3e-09	37.2	0.1	0.00033	20.9	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_28	PF13521.1	gi|429217360|ref|YP_007175350.1|	-	1.3e-08	34.9	0.1	0.0021	18.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|429217360|ref|YP_007175350.1|	-	3.6e-08	33.0	0.5	0.013	15.2	0.1	2.9	2	0	0	2	2	2	2	Part	of	AAA	domain
RNA_helicase	PF00910.17	gi|429217360|ref|YP_007175350.1|	-	7.4e-08	32.5	0.0	0.0022	18.1	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
AAA_25	PF13481.1	gi|429217360|ref|YP_007175350.1|	-	1.6e-07	30.9	6.1	0.07	12.5	0.1	4.3	2	2	1	3	3	3	2	AAA	domain
Mg_chelatase	PF01078.16	gi|429217360|ref|YP_007175350.1|	-	2e-07	30.4	2.0	0.013	14.6	0.0	3.2	4	0	0	4	4	3	2	Magnesium	chelatase,	subunit	ChlI
Bac_DnaA	PF00308.13	gi|429217360|ref|YP_007175350.1|	-	5.2e-07	29.5	0.0	3.4e-05	23.5	0.0	2.4	2	0	0	2	2	2	1	Bacterial	dnaA	protein
NACHT	PF05729.7	gi|429217360|ref|YP_007175350.1|	-	1.7e-06	27.7	1.6	0.26	10.9	0.0	4.2	4	0	0	4	4	4	1	NACHT	domain
AAA_3	PF07726.6	gi|429217360|ref|YP_007175350.1|	-	4e-06	26.4	0.0	0.043	13.4	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|429217360|ref|YP_007175350.1|	-	4.3e-06	27.0	0.0	0.084	13.1	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
AAA_24	PF13479.1	gi|429217360|ref|YP_007175350.1|	-	5.1e-06	26.2	0.2	0.031	13.8	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|429217360|ref|YP_007175350.1|	-	6.8e-06	25.9	0.5	0.011	15.3	0.1	3.5	2	2	2	4	4	4	2	Archaeal	ATPase
Sigma54_activ_2	PF14532.1	gi|429217360|ref|YP_007175350.1|	-	1.1e-05	25.4	0.0	0.13	12.3	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
DUF815	PF05673.8	gi|429217360|ref|YP_007175350.1|	-	1.4e-05	24.1	0.0	0.17	10.7	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
PhoH	PF02562.11	gi|429217360|ref|YP_007175350.1|	-	3.7e-05	23.0	1.1	0.14	11.3	0.1	2.6	2	0	0	2	2	2	2	PhoH-like	protein
Parvo_NS1	PF01057.12	gi|429217360|ref|YP_007175350.1|	-	4.7e-05	22.3	0.4	0.041	12.7	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
Sigma54_activat	PF00158.21	gi|429217360|ref|YP_007175350.1|	-	4.8e-05	22.9	0.1	0.68	9.3	0.0	3.4	4	1	0	4	4	2	2	Sigma-54	interaction	domain
Vps4_C	PF09336.5	gi|429217360|ref|YP_007175350.1|	-	8.1e-05	22.4	0.4	0.12	12.2	0.0	3.0	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|429217360|ref|YP_007175350.1|	-	8.7e-05	22.1	0.5	0.28	10.8	0.0	3.6	4	0	0	4	4	3	1	Uncharacterised	P-loop	hydrolase	UPF0079
DUF2075	PF09848.4	gi|429217360|ref|YP_007175350.1|	-	0.00011	21.2	0.0	0.049	12.6	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|429217360|ref|YP_007175350.1|	-	0.00012	21.3	4.6	0.45	9.6	0.0	4.0	3	2	0	5	5	4	2	KaiC
T2SE	PF00437.15	gi|429217360|ref|YP_007175350.1|	-	0.00053	18.9	0.0	0.47	9.3	0.0	3.0	2	1	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_11	PF13086.1	gi|429217360|ref|YP_007175350.1|	-	0.00086	18.9	0.0	0.91	9.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
SKI	PF01202.17	gi|429217360|ref|YP_007175350.1|	-	0.0013	18.6	0.0	1.7	8.5	0.0	2.5	2	0	0	2	2	2	1	Shikimate	kinase
ATP-synt_ab	PF00006.20	gi|429217360|ref|YP_007175350.1|	-	0.0015	18.0	0.0	1.6	8.1	0.0	2.6	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Molydop_binding	PF01568.16	gi|429217360|ref|YP_007175350.1|	-	0.0019	18.0	0.2	0.0069	16.1	0.0	2.1	2	0	0	2	2	1	1	Molydopterin	dinucleotide	binding	domain
NB-ARC	PF00931.17	gi|429217360|ref|YP_007175350.1|	-	0.0033	16.3	0.0	1.3	7.7	0.0	2.5	2	0	0	2	2	2	1	NB-ARC	domain
NTPase_1	PF03266.10	gi|429217360|ref|YP_007175350.1|	-	0.0039	16.9	2.1	13	5.4	0.0	3.8	2	1	1	3	3	3	0	NTPase
ResIII	PF04851.10	gi|429217360|ref|YP_007175350.1|	-	0.0098	15.7	0.0	4	7.2	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Cytidylate_kin2	PF13189.1	gi|429217360|ref|YP_007175350.1|	-	0.01	15.7	0.0	1.8	8.4	0.0	2.4	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
AFG1_ATPase	PF03969.11	gi|429217360|ref|YP_007175350.1|	-	0.018	13.8	0.0	3.9	6.1	0.0	2.8	3	0	0	3	3	3	0	AFG1-like	ATPase
PduV-EutP	PF10662.4	gi|429217360|ref|YP_007175350.1|	-	0.019	14.4	0.0	3.7	7.0	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
IPT	PF01745.11	gi|429217360|ref|YP_007175350.1|	-	0.019	14.1	0.6	3.2	6.8	0.1	2.5	2	0	0	2	2	2	0	Isopentenyl	transferase
AAA_10	PF12846.2	gi|429217360|ref|YP_007175350.1|	-	0.021	14.2	1.4	11	5.2	0.1	3.4	2	2	1	3	3	3	0	AAA-like	domain
AAA_30	PF13604.1	gi|429217360|ref|YP_007175350.1|	-	0.024	14.2	0.1	8.1	5.9	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
KTI12	PF08433.5	gi|429217360|ref|YP_007175350.1|	-	0.03	13.5	0.0	3.5	6.7	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Guanylate_kin	PF00625.16	gi|429217360|ref|YP_007175350.1|	-	0.034	13.5	0.4	20	4.5	0.0	3.9	2	2	2	4	4	4	0	Guanylate	kinase
Viral_helicase1	PF01443.13	gi|429217360|ref|YP_007175350.1|	-	0.1	12.0	0.0	6	6.3	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
Rad17	PF03215.10	gi|429217360|ref|YP_007175350.1|	-	0.11	11.2	0.0	9.5	4.7	0.0	2.5	2	1	1	3	3	3	0	Rad17	cell	cycle	checkpoint	protein
AAA_29	PF13555.1	gi|429217360|ref|YP_007175350.1|	-	0.12	11.9	0.1	16	5.1	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|429217360|ref|YP_007175350.1|	-	0.17	12.2	0.4	21	5.3	0.0	2.9	2	1	0	2	2	2	0	AAA	domain
AAA_21	PF13304.1	gi|429217360|ref|YP_007175350.1|	-	0.99	9.3	4.9	14	5.4	1.1	3.4	2	2	0	2	2	2	0	AAA	domain
Ribosomal_S19e	PF01090.14	gi|429217361|ref|YP_007175351.1|	-	7e-56	187.5	0.0	7.8e-56	187.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
Rrf2	PF02082.15	gi|429217361|ref|YP_007175351.1|	-	0.07	13.2	0.4	0.17	12.0	0.1	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_3	PF01381.17	gi|429217362|ref|YP_007175352.1|	-	0.0021	17.8	0.0	0.0049	16.6	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
TRF	PF08558.5	gi|429217362|ref|YP_007175352.1|	-	0.047	13.0	0.0	0.052	12.8	0.0	1.1	1	0	0	1	1	1	0	Telomere	repeat	binding	factor	(TRF)
DUF1198	PF06711.6	gi|429217362|ref|YP_007175352.1|	-	0.048	13.4	0.0	0.055	13.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1198)
AhpC-TSA	PF00578.16	gi|429217362|ref|YP_007175352.1|	-	0.14	11.8	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	AhpC/TSA	family
ATP-grasp_5	PF13549.1	gi|429217363|ref|YP_007175353.1|	-	4.6e-72	241.8	0.4	7.1e-72	241.2	0.3	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|429217363|ref|YP_007175353.1|	-	8.8e-47	158.1	0.2	1.2e-45	154.4	0.1	2.6	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|429217363|ref|YP_007175353.1|	-	8.2e-24	84.0	0.0	3.5e-23	81.9	0.0	2.2	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|429217363|ref|YP_007175353.1|	-	7.2e-13	48.8	1.7	1.9e-12	47.4	0.2	2.6	3	0	0	3	3	3	1	CoA	binding	domain
Reo_sigmaC	PF04582.7	gi|429217364|ref|YP_007175354.1|	-	0.00029	20.1	9.3	0.0068	15.6	0.2	2.1	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
FliJ	PF02050.11	gi|429217364|ref|YP_007175354.1|	-	0.0029	17.6	17.4	0.0029	17.6	12.0	4.3	2	2	2	4	4	4	1	Flagellar	FliJ	protein
Baculo_PEP_C	PF04513.7	gi|429217364|ref|YP_007175354.1|	-	0.0048	16.7	1.1	0.0048	16.7	0.8	3.2	1	1	3	4	4	4	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF3450	PF11932.3	gi|429217364|ref|YP_007175354.1|	-	0.0067	15.7	2.5	0.0067	15.7	1.7	3.7	1	1	1	3	3	3	1	Protein	of	unknown	function	(DUF3450)
DUF3584	PF12128.3	gi|429217364|ref|YP_007175354.1|	-	0.0076	13.6	45.3	0.009	13.4	10.4	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF3584)
Kinetocho_Slk19	PF12709.2	gi|429217364|ref|YP_007175354.1|	-	0.012	15.6	1.2	0.012	15.6	0.9	6.0	1	1	6	7	7	7	0	Central	kinetochore-associated
Prefoldin	PF02996.12	gi|429217364|ref|YP_007175354.1|	-	0.017	14.7	1.4	0.017	14.7	1.0	6.2	3	2	5	8	8	8	0	Prefoldin	subunit
Seryl_tRNA_N	PF02403.17	gi|429217364|ref|YP_007175354.1|	-	0.023	14.6	56.3	0.091	12.7	8.7	4.9	1	1	2	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
AAA_27	PF13514.1	gi|429217364|ref|YP_007175354.1|	-	0.025	12.3	35.5	0.01	13.5	22.6	1.8	1	1	0	1	1	1	0	AAA	domain
Lectin_N	PF03954.9	gi|429217364|ref|YP_007175354.1|	-	0.031	13.6	0.7	0.031	13.6	0.5	3.5	2	1	2	4	4	4	0	Hepatic	lectin,	N-terminal	domain
LPP	PF04728.8	gi|429217364|ref|YP_007175354.1|	-	0.067	12.9	3.2	1.9	8.3	0.1	3.8	3	1	1	4	4	4	0	Lipoprotein	leucine-zipper
IncA	PF04156.9	gi|429217364|ref|YP_007175354.1|	-	0.081	12.5	61.8	29	4.1	18.2	3.4	1	1	1	2	2	2	0	IncA	protein
MtrB	PF05440.7	gi|429217364|ref|YP_007175354.1|	-	0.12	12.3	3.4	5.7	7.0	0.0	4.0	1	1	3	4	4	4	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
Filament	PF00038.16	gi|429217364|ref|YP_007175354.1|	-	0.16	11.4	48.4	0.031	13.7	4.7	3.9	1	1	2	3	3	3	0	Intermediate	filament	protein
AAA_13	PF13166.1	gi|429217364|ref|YP_007175354.1|	-	0.22	9.9	43.1	0.0024	16.3	21.3	2.1	1	1	1	2	2	2	0	AAA	domain
APG6	PF04111.7	gi|429217364|ref|YP_007175354.1|	-	0.26	10.2	52.7	0.016	14.2	9.3	3.2	1	1	3	4	4	4	0	Autophagy	protein	Apg6
DUF2125	PF09898.4	gi|429217364|ref|YP_007175354.1|	-	0.29	10.4	1.6	0.86	8.8	0.1	2.1	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2125)
MCPsignal	PF00015.16	gi|429217364|ref|YP_007175354.1|	-	0.31	10.5	13.5	0.14	11.6	1.2	2.8	1	1	2	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
KH_5	PF13184.1	gi|429217364|ref|YP_007175354.1|	-	0.38	10.5	0.1	0.38	10.5	0.1	3.5	3	2	0	4	4	3	0	NusA-like	KH	domain
Laminin_II	PF06009.7	gi|429217364|ref|YP_007175354.1|	-	0.43	10.3	37.8	0.015	15.0	4.3	4.1	1	1	2	3	3	3	0	Laminin	Domain	II
DUF948	PF06103.6	gi|429217364|ref|YP_007175354.1|	-	0.43	10.4	20.9	0.2	11.5	0.6	4.6	1	1	5	6	6	6	0	Bacterial	protein	of	unknown	function	(DUF948)
Mnd1	PF03962.10	gi|429217364|ref|YP_007175354.1|	-	0.64	9.6	45.7	0.46	10.1	6.5	3.4	1	1	2	3	3	3	0	Mnd1	family
TelA	PF05816.6	gi|429217364|ref|YP_007175354.1|	-	1.5	7.4	41.4	0.0068	15.1	9.2	2.6	1	1	1	2	2	2	0	Toxic	anion	resistance	protein	(TelA)
ATG16	PF08614.6	gi|429217364|ref|YP_007175354.1|	-	1.8	8.3	53.9	0.032	14.0	12.9	3.8	1	1	3	4	4	4	0	Autophagy	protein	16	(ATG16)
Atg14	PF10186.4	gi|429217364|ref|YP_007175354.1|	-	2	7.2	55.6	0.0087	15.0	10.2	3.3	1	1	1	2	2	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Bacillus_HBL	PF05791.6	gi|429217364|ref|YP_007175354.1|	-	2.1	7.6	34.7	0.72	9.1	2.4	4.0	1	1	3	4	4	4	0	Bacillus	haemolytic	enterotoxin	(HBL)
TBPIP	PF07106.8	gi|429217364|ref|YP_007175354.1|	-	2.4	7.7	51.3	8.8	5.8	14.7	3.8	1	1	2	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Pet20	PF08692.5	gi|429217364|ref|YP_007175354.1|	-	3.2	7.7	7.6	0.2	11.6	0.4	2.5	2	1	0	2	2	2	0	Mitochondrial	protein	Pet20
DUF1664	PF07889.7	gi|429217364|ref|YP_007175354.1|	-	3.5	7.4	34.3	2.1	8.1	4.4	4.2	1	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1664)
bZIP_1	PF00170.16	gi|429217364|ref|YP_007175354.1|	-	3.6	7.5	48.8	0.16	11.9	1.5	6.6	2	2	6	8	8	8	0	bZIP	transcription	factor
DUF972	PF06156.8	gi|429217364|ref|YP_007175354.1|	-	4	7.8	45.8	0.16	12.2	2.7	5.0	1	1	3	5	5	5	0	Protein	of	unknown	function	(DUF972)
Laminin_I	PF06008.9	gi|429217364|ref|YP_007175354.1|	-	9.5	5.4	46.0	0.39	9.9	6.4	2.9	1	1	1	2	2	2	0	Laminin	Domain	I
DUF447	PF04289.7	gi|429217365|ref|YP_007175355.1|	-	4.7e-07	29.5	0.0	5.5e-07	29.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
MAF_flag10	PF01973.13	gi|429217366|ref|YP_007175356.1|	-	3.1e-07	30.0	2.6	1e-06	28.4	1.8	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF115
Glu-tRNAGln	PF02686.10	gi|429217366|ref|YP_007175356.1|	-	0.0087	15.8	0.2	0.027	14.2	0.0	1.8	2	0	0	2	2	2	1	Glu-tRNAGln	amidotransferase	C	subunit
UPF0122	PF04297.9	gi|429217366|ref|YP_007175356.1|	-	0.32	11.0	3.8	0.34	10.9	0.6	2.3	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
MoeA_N	PF03453.12	gi|429217367|ref|YP_007175357.1|	-	9.1e-50	168.1	0.0	1.4e-49	167.5	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|429217367|ref|YP_007175357.1|	-	8.7e-28	96.5	0.9	1.5e-27	95.7	0.1	1.8	2	0	0	2	2	2	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|429217367|ref|YP_007175357.1|	-	1.5e-15	56.8	0.0	4.4e-15	55.3	0.0	1.8	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
TRM	PF02005.11	gi|429217368|ref|YP_007175358.1|	-	2.8e-89	299.6	1.0	1.3e-88	297.5	0.7	1.8	1	1	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.11	gi|429217368|ref|YP_007175358.1|	-	0.0015	18.1	0.2	0.0026	17.3	0.2	1.5	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_31	PF13847.1	gi|429217368|ref|YP_007175358.1|	-	0.0023	17.5	0.1	0.0043	16.6	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
HTH_6	PF01418.12	gi|429217368|ref|YP_007175358.1|	-	0.018	14.7	0.0	0.037	13.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
Cons_hypoth95	PF03602.10	gi|429217368|ref|YP_007175358.1|	-	0.11	11.8	0.1	0.2	11.0	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
NTPase_1	PF03266.10	gi|429217369|ref|YP_007175359.1|	-	7.2e-42	142.9	0.3	8.2e-42	142.7	0.2	1.0	1	0	0	1	1	1	1	NTPase
AAA_17	PF13207.1	gi|429217369|ref|YP_007175359.1|	-	5.6e-06	27.1	0.2	1.1e-05	26.2	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|429217369|ref|YP_007175359.1|	-	6.5e-06	26.3	0.0	1.2e-05	25.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|429217369|ref|YP_007175359.1|	-	3.5e-05	24.1	2.5	0.00011	22.5	1.7	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|429217369|ref|YP_007175359.1|	-	6.3e-05	23.1	1.7	0.00055	20.1	1.2	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|429217369|ref|YP_007175359.1|	-	0.00022	20.3	0.1	0.4	9.7	0.0	2.2	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
DUF2075	PF09848.4	gi|429217369|ref|YP_007175359.1|	-	0.00044	19.3	0.1	0.00048	19.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|429217369|ref|YP_007175359.1|	-	0.0027	17.1	0.1	2.2	7.6	0.0	2.3	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
DnaB_C	PF03796.10	gi|429217369|ref|YP_007175359.1|	-	0.003	16.4	0.1	0.016	14.1	0.0	2.0	2	1	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
KaiC	PF06745.8	gi|429217369|ref|YP_007175359.1|	-	0.004	16.3	1.2	0.012	14.7	0.8	1.7	1	1	0	1	1	1	1	KaiC
APS_kinase	PF01583.15	gi|429217369|ref|YP_007175359.1|	-	0.0041	16.7	0.1	0.019	14.6	0.0	2.0	2	0	0	2	2	2	1	Adenylylsulphate	kinase
AAA_25	PF13481.1	gi|429217369|ref|YP_007175359.1|	-	0.009	15.4	0.1	0.18	11.1	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|429217369|ref|YP_007175359.1|	-	0.012	15.0	0.3	0.042	13.2	0.0	1.9	2	1	0	2	2	2	0	Thymidylate	kinase
Arch_ATPase	PF01637.13	gi|429217369|ref|YP_007175359.1|	-	0.015	15.0	4.1	0.0094	15.6	1.5	1.6	1	1	1	2	2	2	0	Archaeal	ATPase
AAA_14	PF13173.1	gi|429217369|ref|YP_007175359.1|	-	0.019	14.8	7.1	0.069	13.0	1.3	2.8	1	1	1	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|429217369|ref|YP_007175359.1|	-	0.039	14.2	0.1	0.055	13.7	0.1	1.3	1	0	0	1	1	1	0	ABC	transporter
NACHT	PF05729.7	gi|429217369|ref|YP_007175359.1|	-	0.042	13.5	0.1	0.059	13.0	0.1	1.7	1	1	0	1	1	1	0	NACHT	domain
ADK	PF00406.17	gi|429217369|ref|YP_007175359.1|	-	0.045	13.6	0.3	0.096	12.5	0.2	1.8	1	1	0	1	1	1	0	Adenylate	kinase
MMR_HSR1	PF01926.18	gi|429217369|ref|YP_007175359.1|	-	0.047	13.6	0.7	0.093	12.6	0.5	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_19	PF13245.1	gi|429217369|ref|YP_007175359.1|	-	0.051	13.3	0.0	0.071	12.8	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
RNA_helicase	PF00910.17	gi|429217369|ref|YP_007175359.1|	-	0.053	13.6	0.2	0.26	11.4	0.1	2.3	1	1	0	1	1	1	0	RNA	helicase
JmjN	PF02375.12	gi|429217369|ref|YP_007175359.1|	-	0.064	12.7	0.3	0.13	11.8	0.2	1.5	1	0	0	1	1	1	0	jmjN	domain
AAA_5	PF07728.9	gi|429217369|ref|YP_007175359.1|	-	0.069	12.8	0.4	0.73	9.5	0.2	2.1	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.1	gi|429217369|ref|YP_007175359.1|	-	0.075	12.6	1.8	0.83	9.1	1.2	2.1	1	1	0	1	1	1	0	AAA	domain
ATP_synth_reg	PF14960.1	gi|429217369|ref|YP_007175359.1|	-	0.088	12.0	0.1	0.21	10.7	0.0	1.7	2	0	0	2	2	2	0	ATP	synthase	regulation
AAA_30	PF13604.1	gi|429217369|ref|YP_007175359.1|	-	0.14	11.6	0.0	0.38	10.2	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|429217369|ref|YP_007175359.1|	-	0.38	10.1	2.4	2.2	7.6	1.5	2.1	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
HTH_3	PF01381.17	gi|429217370|ref|YP_007175360.1|	-	5.1e-10	39.0	0.1	2.2e-09	36.9	0.0	2.1	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|429217370|ref|YP_007175360.1|	-	4.1e-09	36.3	0.2	2.1e-08	34.0	0.0	2.3	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|429217370|ref|YP_007175360.1|	-	9.9e-05	22.4	0.0	0.00021	21.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|429217370|ref|YP_007175360.1|	-	0.0092	15.5	0.2	0.045	13.3	0.1	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|429217370|ref|YP_007175360.1|	-	0.01	15.4	0.0	0.062	12.9	0.0	2.3	3	0	0	3	3	3	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|429217370|ref|YP_007175360.1|	-	0.013	15.4	0.1	0.067	13.2	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|429217370|ref|YP_007175360.1|	-	0.015	15.5	1.0	0.03	14.5	0.0	2.0	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|429217370|ref|YP_007175360.1|	-	0.02	14.5	0.2	0.14	11.8	0.0	2.6	2	0	0	2	2	2	0	HTH	domain
Sigma70_r4_2	PF08281.7	gi|429217370|ref|YP_007175360.1|	-	0.023	14.1	0.4	0.74	9.3	0.0	2.5	2	0	0	2	2	2	0	Sigma-70,	region	4
SHMT	PF00464.14	gi|429217372|ref|YP_007175362.1|	-	5.7e-66	222.5	0.1	7.3e-66	222.1	0.0	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|429217372|ref|YP_007175362.1|	-	1.6e-10	40.6	0.0	2.2e-10	40.1	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|429217372|ref|YP_007175362.1|	-	1.6e-07	30.6	0.0	4.8e-07	29.0	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
GlutR_dimer	PF00745.15	gi|429217372|ref|YP_007175362.1|	-	0.021	14.7	0.5	0.24	11.3	0.0	2.7	3	1	0	3	3	3	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
SelA	PF03841.8	gi|429217372|ref|YP_007175362.1|	-	0.036	12.8	0.0	0.1	11.3	0.0	1.7	1	1	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
DUF1664	PF07889.7	gi|429217372|ref|YP_007175362.1|	-	0.072	12.8	0.3	14	5.4	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
RIB43A	PF05914.7	gi|429217372|ref|YP_007175362.1|	-	0.094	11.3	0.1	0.14	10.7	0.1	1.2	1	0	0	1	1	1	0	RIB43A
zf-C2H2_4	PF13894.1	gi|429217373|ref|YP_007175363.1|	-	0.0022	18.2	0.1	0.0036	17.5	0.1	1.4	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-C2H2_jaz	PF12171.3	gi|429217373|ref|YP_007175363.1|	-	0.0056	16.7	0.1	0.011	15.7	0.1	1.5	1	0	0	1	1	1	1	Zinc-finger	double-stranded	RNA-binding
zf-Di19	PF05605.7	gi|429217373|ref|YP_007175363.1|	-	0.036	14.2	0.1	0.055	13.6	0.0	1.2	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2	PF00096.21	gi|429217373|ref|YP_007175363.1|	-	0.045	14.1	0.3	0.086	13.2	0.2	1.5	1	0	0	1	1	1	0	Zinc	finger,	C2H2	type
DUF629	PF04780.7	gi|429217373|ref|YP_007175363.1|	-	0.074	11.5	0.0	0.078	11.4	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF629)
zf-met	PF12874.2	gi|429217373|ref|YP_007175363.1|	-	0.093	12.9	0.2	0.17	12.1	0.2	1.5	1	0	0	1	1	1	0	Zinc-finger	of	C2H2	type
TF_Zn_Ribbon	PF08271.7	gi|429217373|ref|YP_007175363.1|	-	0.14	11.5	0.0	0.21	10.9	0.0	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
PadR	PF03551.9	gi|429217374|ref|YP_007175364.1|	-	2.4e-10	40.0	0.1	5.4e-10	38.8	0.1	1.6	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
Mrr_N	PF14338.1	gi|429217374|ref|YP_007175364.1|	-	0.00015	21.7	0.0	0.002	18.1	0.0	2.1	1	1	1	2	2	2	1	Mrr	N-terminal	domain
HTH_45	PF14947.1	gi|429217374|ref|YP_007175364.1|	-	0.0013	18.4	0.1	0.0022	17.7	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
Ribosomal_S19e	PF01090.14	gi|429217374|ref|YP_007175364.1|	-	0.0038	16.6	0.0	0.0049	16.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19e
MarR	PF01047.17	gi|429217374|ref|YP_007175364.1|	-	0.016	14.9	0.1	0.051	13.2	0.0	2.0	2	1	1	3	3	3	0	MarR	family
DUF2084	PF09857.4	gi|429217374|ref|YP_007175364.1|	-	0.026	14.2	0.0	0.071	12.8	0.0	1.8	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2084)
HTH_12	PF08461.5	gi|429217374|ref|YP_007175364.1|	-	0.088	12.5	0.3	0.14	11.9	0.2	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
Aminotran_1_2	PF00155.16	gi|429217375|ref|YP_007175365.1|	-	3.2e-55	187.5	0.0	3.6e-55	187.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|429217375|ref|YP_007175365.1|	-	4.3e-10	38.4	0.0	6e-10	37.9	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|429217375|ref|YP_007175365.1|	-	3.2e-07	29.7	0.0	5e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|429217375|ref|YP_007175365.1|	-	0.00039	19.2	0.0	0.00092	18.0	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
UPF0175	PF03683.8	gi|429217376|ref|YP_007175366.1|	-	0.00012	21.4	0.2	0.00026	20.4	0.1	1.6	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
DUF2191	PF09957.4	gi|429217376|ref|YP_007175366.1|	-	0.0028	17.4	0.2	0.012	15.4	0.2	2.1	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
PIN_4	PF13638.1	gi|429217376|ref|YP_007175366.1|	-	0.026	14.6	0.6	0.066	13.3	0.4	1.8	1	1	0	1	1	1	0	PIN	domain
DUF3896	PF13035.1	gi|429217376|ref|YP_007175366.1|	-	0.063	13.3	0.2	0.29	11.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3896)
DSBA	PF01323.15	gi|429217376|ref|YP_007175366.1|	-	0.073	12.6	0.0	0.18	11.3	0.0	1.7	1	0	0	1	1	1	0	DSBA-like	thioredoxin	domain
RHH_1	PF01402.16	gi|429217376|ref|YP_007175366.1|	-	0.21	11.5	3.9	0.48	10.4	0.1	3.5	5	0	0	5	5	5	0	Ribbon-helix-helix	protein,	copG	family
VWA_2	PF13519.1	gi|429217377|ref|YP_007175367.1|	-	4.4e-12	46.4	0.0	5e-12	46.2	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|429217377|ref|YP_007175367.1|	-	3.6e-07	30.0	0.0	4.4e-07	29.8	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
Ssl1	PF04056.9	gi|429217377|ref|YP_007175367.1|	-	0.081	12.5	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Ssl1-like
Humanin	PF15040.1	gi|429217377|ref|YP_007175367.1|	-	0.12	11.6	1.0	0.29	10.3	0.5	1.8	2	0	0	2	2	2	0	Humanin	family
Molybdopterin	PF00384.17	gi|429217378|ref|YP_007175368.1|	-	1.2e-88	297.7	0.0	1.8e-88	297.1	0.0	1.3	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|429217378|ref|YP_007175368.1|	-	8.2e-27	93.1	0.0	1.5e-26	92.3	0.0	1.4	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|429217378|ref|YP_007175368.1|	-	1.5e-18	66.3	1.6	1.5e-18	66.3	1.1	2.0	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2_4	PF13510.1	gi|429217378|ref|YP_007175368.1|	-	1.2e-14	53.8	0.0	3.2e-14	52.4	0.0	1.8	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_7	PF12838.2	gi|429217378|ref|YP_007175368.1|	-	1.2e-08	35.1	3.5	1.2e-08	35.1	2.4	2.6	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|429217378|ref|YP_007175368.1|	-	4.8e-08	32.7	3.6	4.8e-08	32.7	2.5	2.7	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217378|ref|YP_007175368.1|	-	1.4e-07	31.6	6.6	1.4e-07	31.6	4.6	3.1	3	1	1	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|429217378|ref|YP_007175368.1|	-	2e-07	30.9	4.9	2e-07	30.9	3.4	2.3	3	0	0	3	3	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|429217378|ref|YP_007175368.1|	-	3.8e-07	29.4	1.5	3.8e-07	29.4	1.0	3.3	4	0	0	4	4	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217378|ref|YP_007175368.1|	-	7e-07	28.9	13.5	0.0012	18.5	0.3	3.1	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217378|ref|YP_007175368.1|	-	1.2e-06	28.1	25.4	4.6e-05	23.0	1.5	4.2	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer2	PF00111.22	gi|429217378|ref|YP_007175368.1|	-	9.5e-06	25.2	0.0	9.5e-06	25.2	0.0	2.0	2	1	0	2	2	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_18	PF13746.1	gi|429217378|ref|YP_007175368.1|	-	1.1e-05	25.7	9.0	0.0024	18.2	0.2	3.4	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|429217378|ref|YP_007175368.1|	-	2.7e-05	24.6	6.1	0.034	14.7	1.0	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_2	PF12797.2	gi|429217378|ref|YP_007175368.1|	-	0.0003	20.5	11.9	0.0014	18.4	1.2	3.4	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|429217378|ref|YP_007175368.1|	-	0.0027	18.4	3.4	0.0027	18.4	2.4	3.2	3	0	0	3	3	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|429217378|ref|YP_007175368.1|	-	0.0065	16.7	3.8	0.0065	16.7	2.6	4.1	5	0	0	5	5	3	1	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|429217378|ref|YP_007175368.1|	-	0.017	15.6	6.5	0.017	15.6	4.5	3.8	5	0	0	5	5	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|429217378|ref|YP_007175368.1|	-	0.02	15.2	14.8	0.37	11.1	1.9	3.2	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|429217378|ref|YP_007175368.1|	-	0.17	12.2	10.9	2.2	8.7	1.4	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|429217378|ref|YP_007175368.1|	-	2.4	8.0	6.9	3.7	7.4	0.0	3.2	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Complex1_51K	PF01512.12	gi|429217379|ref|YP_007175369.1|	-	2e-47	160.7	0.1	3.5e-47	159.9	0.1	1.4	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
NADH_4Fe-4S	PF10589.4	gi|429217379|ref|YP_007175369.1|	-	5e-10	38.3	0.0	1.1e-09	37.3	0.0	1.6	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
SLBB	PF10531.4	gi|429217379|ref|YP_007175369.1|	-	0.032	14.1	0.0	0.082	12.8	0.0	1.7	1	0	0	1	1	1	0	SLBB	domain
AA_kinase	PF00696.23	gi|429217380|ref|YP_007175370.1|	-	1e-29	103.8	0.1	1.2e-29	103.5	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
ATP-synt_ab	PF00006.20	gi|429217381|ref|YP_007175371.1|	-	4.2e-62	209.4	0.0	5.5e-62	209.0	0.0	1.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|429217381|ref|YP_007175371.1|	-	2.6e-16	60.0	0.1	5.1e-16	59.1	0.1	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|429217381|ref|YP_007175371.1|	-	3.6e-12	46.3	3.8	3.6e-12	46.3	2.6	1.8	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|429217381|ref|YP_007175371.1|	-	1.2e-05	25.1	2.7	3.7e-05	23.5	1.8	1.8	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_ab	PF00006.20	gi|429217382|ref|YP_007175372.1|	-	3.7e-93	310.9	0.0	5e-93	310.5	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|429217382|ref|YP_007175372.1|	-	3.3e-19	69.4	0.5	6.2e-19	68.5	0.3	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|429217382|ref|YP_007175372.1|	-	5.8e-13	48.8	3.1	1.6e-12	47.4	2.1	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_19	PF13245.1	gi|429217382|ref|YP_007175372.1|	-	0.014	15.1	0.1	0.33	10.7	0.0	2.5	2	0	0	2	2	2	0	Part	of	AAA	domain
DUF853	PF05872.7	gi|429217382|ref|YP_007175372.1|	-	0.22	9.8	0.4	0.33	9.2	0.2	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF853)
HAS-barrel	PF09378.5	gi|429217382|ref|YP_007175372.1|	-	1.2	9.0	6.9	1.5	8.7	0.7	3.1	3	0	0	3	3	3	0	HAS	barrel	domain
vATP-synt_E	PF01991.13	gi|429217383|ref|YP_007175373.1|	-	1.5e-13	50.5	11.1	2.2e-13	49.9	7.7	1.4	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
His_Phos_2	PF00328.17	gi|429217383|ref|YP_007175373.1|	-	0.073	12.3	1.0	0.088	12.1	0.7	1.0	1	0	0	1	1	1	0	Histidine	phosphatase	superfamily	(branch	2)
DUF445	PF04286.7	gi|429217383|ref|YP_007175373.1|	-	0.11	12.0	6.7	0.16	11.4	4.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Peptidase_M75	PF09375.5	gi|429217383|ref|YP_007175373.1|	-	0.16	11.2	2.1	1.1	8.4	1.5	1.9	1	1	0	1	1	1	0	Imelysin
DUF1311	PF07007.7	gi|429217383|ref|YP_007175373.1|	-	0.19	11.8	1.2	0.64	10.1	0.8	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1311)
Syntaxin-6_N	PF09177.6	gi|429217383|ref|YP_007175373.1|	-	0.2	12.0	6.8	3.5	8.1	1.9	2.3	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Laminin_I	PF06008.9	gi|429217383|ref|YP_007175373.1|	-	0.29	10.4	8.1	0.16	11.2	3.2	1.9	1	1	1	2	2	2	0	Laminin	Domain	I
TA0956	PF11513.3	gi|429217383|ref|YP_007175373.1|	-	1.3	9.1	6.8	0.6	10.1	1.4	2.3	1	1	1	2	2	2	0	Thermoplasma	acidophilum	protein	TA0956
Mitofilin	PF09731.4	gi|429217383|ref|YP_007175373.1|	-	4.3	5.8	14.7	1.1	7.8	8.0	1.6	1	1	1	2	2	2	0	Mitochondrial	inner	membrane	protein
ATP-synt_F	PF01990.12	gi|429217384|ref|YP_007175374.1|	-	6.2e-07	29.7	0.1	7.1e-07	29.5	0.1	1.2	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
PrpR_N	PF06506.6	gi|429217384|ref|YP_007175374.1|	-	0.048	13.0	0.1	0.068	12.5	0.0	1.3	1	0	0	1	1	1	0	Propionate	catabolism	activator
YCII	PF03795.9	gi|429217384|ref|YP_007175374.1|	-	0.12	12.5	0.0	0.19	11.9	0.0	1.4	1	0	0	1	1	1	0	YCII-related	domain
V_ATPase_I	PF01496.14	gi|429217385|ref|YP_007175375.1|	-	2e-59	201.2	20.1	9.7e-44	149.3	4.5	2.2	2	0	0	2	2	2	2	V-type	ATPase	116kDa	subunit	family
BLOC1_2	PF10046.4	gi|429217385|ref|YP_007175375.1|	-	0.0091	16.1	8.1	0.069	13.2	1.6	2.5	2	0	0	2	2	2	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4559	PF15112.1	gi|429217385|ref|YP_007175375.1|	-	0.014	14.5	1.2	0.24	10.5	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4559)
Syntaphilin	PF15290.1	gi|429217385|ref|YP_007175375.1|	-	0.017	14.6	1.1	0.027	13.9	0.8	1.2	1	0	0	1	1	1	0	Golgi-localised	syntaxin-1-binding	clamp
COG5	PF10392.4	gi|429217385|ref|YP_007175375.1|	-	0.03	14.2	0.1	0.06	13.3	0.0	1.4	1	0	0	1	1	1	0	Golgi	transport	complex	subunit	5
Med4	PF10018.4	gi|429217385|ref|YP_007175375.1|	-	0.095	12.0	1.0	0.36	10.2	0.1	2.1	2	0	0	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Baculo_PEP_C	PF04513.7	gi|429217385|ref|YP_007175375.1|	-	0.098	12.4	2.3	0.58	9.9	0.3	2.3	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF615	PF04751.9	gi|429217385|ref|YP_007175375.1|	-	0.19	11.3	0.0	0.61	9.7	0.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF615)
DUF4298	PF14131.1	gi|429217385|ref|YP_007175375.1|	-	0.72	9.7	5.6	0.22	11.3	1.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4298)
LOH1CR12	PF10158.4	gi|429217385|ref|YP_007175375.1|	-	0.83	9.4	3.1	2.4	7.9	0.4	2.2	2	0	0	2	2	2	0	Tumour	suppressor	protein
LON	PF02190.11	gi|429217385|ref|YP_007175375.1|	-	9.6	5.8	10.2	1.9e+02	1.5	7.0	2.4	1	1	0	1	1	1	0	ATP-dependent	protease	La	(LON)	domain
PadR	PF03551.9	gi|429217386|ref|YP_007175376.1|	-	6.4e-19	67.5	0.2	9.2e-19	66.9	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
AphA_like	PF14557.1	gi|429217386|ref|YP_007175376.1|	-	0.067	12.7	0.0	0.088	12.3	0.0	1.2	1	0	0	1	1	1	0	Putative	AphA-like	transcriptional	regulator
TP_methylase	PF00590.15	gi|429217387|ref|YP_007175377.1|	-	2.5e-15	56.7	0.0	3e-15	56.4	0.0	1.2	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Peptidase_M50	PF02163.17	gi|429217388|ref|YP_007175378.1|	-	3.1e-12	45.8	6.0	3.1e-12	45.8	4.2	3.0	2	1	1	3	3	3	1	Peptidase	family	M50
DUF2417	PF10329.4	gi|429217388|ref|YP_007175378.1|	-	1.2	8.4	7.3	0.091	12.1	0.6	2.2	2	0	0	2	2	2	0	Region	of	unknown	function	(DUF2417)
Herpes_DNAp_acc	PF04929.7	gi|429217390|ref|YP_007175380.1|	-	0.00012	21.2	2.6	0.00023	20.2	1.8	1.5	1	1	0	1	1	1	1	Herpes	DNA	replication	accessory	factor
Peptidase_C37	PF05416.7	gi|429217390|ref|YP_007175380.1|	-	1.4	7.1	10.7	1.5	7.0	7.4	1.1	1	0	0	1	1	1	0	Southampton	virus-type	processing	peptidase
DUF936	PF06075.7	gi|429217390|ref|YP_007175380.1|	-	2.2	7.0	20.6	2.5	6.9	14.3	1.0	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF936)
LicD	PF04991.8	gi|429217390|ref|YP_007175380.1|	-	3.9	7.5	7.8	4.7	7.2	5.4	1.2	1	0	0	1	1	1	0	LicD	family
Troponin	PF00992.15	gi|429217390|ref|YP_007175380.1|	-	7.4	6.6	33.6	19	5.3	23.3	1.6	1	1	0	1	1	1	0	Troponin
Fcf1	PF04900.7	gi|429217391|ref|YP_007175381.1|	-	0.025	14.6	0.0	0.037	14.1	0.0	1.2	1	0	0	1	1	1	0	Fcf1
Hydrolase_6	PF13344.1	gi|429217391|ref|YP_007175381.1|	-	0.049	13.5	0.0	0.076	12.9	0.0	1.3	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
DUF3890	PF13029.1	gi|429217391|ref|YP_007175381.1|	-	0.062	13.3	0.2	0.14	12.2	0.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3890)
RNA_pol_Rpb6	PF01192.17	gi|429217392|ref|YP_007175382.1|	-	3.9e-11	42.5	0.0	5.3e-11	42.0	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Ribosomal_L21e	PF01157.13	gi|429217393|ref|YP_007175383.1|	-	5.2e-24	83.9	1.6	6e-24	83.7	1.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
RNA_pol_Rpb4	PF03874.11	gi|429217394|ref|YP_007175384.1|	-	6.3e-10	39.0	0.7	8.8e-10	38.6	0.5	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
Topoisom_bac	PF01131.15	gi|429217395|ref|YP_007175385.1|	-	2.1e-95	319.9	0.3	2.6e-95	319.6	0.2	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|429217395|ref|YP_007175385.1|	-	8.7e-07	28.8	0.0	4.3e-06	26.6	0.0	2.2	1	0	0	1	1	1	1	Toprim	domain
ProRS-C_1	PF09180.6	gi|429217395|ref|YP_007175385.1|	-	0.097	12.5	0.2	0.24	11.3	0.1	1.6	1	0	0	1	1	1	0	Prolyl-tRNA	synthetase,	C-terminal
Peptidase_S24	PF00717.18	gi|429217396|ref|YP_007175386.1|	-	1.4e-07	31.0	0.3	3e-07	29.9	0.2	1.5	1	0	0	1	1	1	1	Peptidase	S24-like
Ribonuc_red_lgC	PF02867.10	gi|429217397|ref|YP_007175387.1|	-	6.8e-123	411.0	0.0	1.4e-121	406.6	0.0	2.5	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|429217397|ref|YP_007175387.1|	-	3.7e-14	52.2	0.3	8.4e-14	51.1	0.2	1.6	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
NAAA-beta	PF15508.1	gi|429217397|ref|YP_007175387.1|	-	0.043	14.1	0.3	0.75	10.1	0.0	3.1	3	0	0	3	3	3	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
RecR	PF02132.10	gi|429217398|ref|YP_007175388.1|	-	8.6e-07	28.2	0.3	8.6e-07	28.2	0.2	2.7	3	0	0	3	3	3	1	RecR	protein
TF_Zn_Ribbon	PF08271.7	gi|429217398|ref|YP_007175388.1|	-	0.0029	16.8	0.2	0.0029	16.8	0.1	1.9	2	0	0	2	2	2	1	TFIIB	zinc-binding
ArfGap	PF01412.13	gi|429217398|ref|YP_007175388.1|	-	0.024	14.4	0.2	0.045	13.5	0.1	1.5	1	0	0	1	1	1	0	Putative	GTPase	activating	protein	for	Arf
DUF4428	PF14471.1	gi|429217398|ref|YP_007175388.1|	-	2.2	8.0	18.3	0.034	13.8	2.9	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4428)
zf-B_box	PF00643.19	gi|429217398|ref|YP_007175388.1|	-	4.4	7.2	7.0	1.2	9.1	0.4	2.4	2	0	0	2	2	2	0	B-box	zinc	finger
Lsm_interact	PF05391.6	gi|429217399|ref|YP_007175389.1|	-	0.045	13.1	1.4	0.045	13.1	1.0	2.0	2	0	0	2	2	2	0	Lsm	interaction	motif
TF_Zn_Ribbon	PF08271.7	gi|429217399|ref|YP_007175389.1|	-	0.061	12.6	4.7	0.3	10.4	3.3	2.2	1	1	0	1	1	1	0	TFIIB	zinc-binding
DNA_RNApol_7kD	PF03604.8	gi|429217399|ref|YP_007175389.1|	-	0.069	12.6	1.1	0.12	11.8	0.1	1.9	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF1002	PF06207.6	gi|429217399|ref|YP_007175389.1|	-	0.26	10.5	8.9	0.034	13.4	3.4	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1002)
MFS_1	PF07690.11	gi|429217400|ref|YP_007175390.1|	-	1.6e-06	27.1	35.0	1.6e-06	27.1	24.3	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DEAD	PF00270.24	gi|429217401|ref|YP_007175391.1|	-	1.8e-39	134.9	0.5	6.5e-36	123.3	0.0	3.0	3	0	0	3	3	3	2	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|429217401|ref|YP_007175391.1|	-	8.7e-22	77.7	0.0	1.8e-21	76.7	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|429217401|ref|YP_007175391.1|	-	2.2e-16	59.4	0.1	3.4e-15	55.6	0.1	2.7	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|429217401|ref|YP_007175391.1|	-	5.4e-08	32.8	0.0	1.8e-06	27.9	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
UPF0515	PF15135.1	gi|429217401|ref|YP_007175391.1|	-	0.015	14.3	0.5	0.026	13.5	0.3	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	UPF0515
DUF4379	PF14311.1	gi|429217401|ref|YP_007175391.1|	-	0.046	13.5	1.3	0.12	12.2	0.9	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
Zn-ribbon_8	PF09723.5	gi|429217401|ref|YP_007175391.1|	-	0.14	12.0	0.2	0.28	11.1	0.1	1.4	1	0	0	1	1	1	0	Zinc	ribbon	domain
DZR	PF12773.2	gi|429217401|ref|YP_007175391.1|	-	0.32	10.8	0.4	0.58	10.0	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
CRISPR_Cas2	PF09827.4	gi|429217401|ref|YP_007175391.1|	-	0.67	10.1	4.4	3.2	7.9	0.1	3.6	4	0	0	4	4	4	0	CRISPR	associated	protein	Cas2
Cpn60_TCP1	PF00118.19	gi|429217402|ref|YP_007175392.1|	-	9.4e-166	552.1	17.7	1.1e-165	551.9	12.3	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Alba	PF01918.16	gi|429217402|ref|YP_007175392.1|	-	0.034	13.7	0.0	0.11	12.0	0.0	1.9	1	0	0	1	1	1	0	Alba
DUF2277	PF10041.4	gi|429217402|ref|YP_007175392.1|	-	0.04	13.8	0.0	0.15	12.0	0.0	2.0	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2277)
DHHA1	PF02272.14	gi|429217403|ref|YP_007175393.1|	-	0.037	13.7	1.0	0.078	12.6	0.0	2.0	3	0	0	3	3	3	0	DHHA1	domain
Pox_P4A	PF03395.9	gi|429217403|ref|YP_007175393.1|	-	0.043	11.3	0.1	0.056	10.9	0.1	1.1	1	0	0	1	1	1	0	Poxvirus	P4A	protein
MFS_1	PF07690.11	gi|429217404|ref|YP_007175394.1|	-	3.3e-27	95.1	40.1	3.3e-27	95.1	27.8	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
DUF3464	PF11947.3	gi|429217404|ref|YP_007175394.1|	-	0.45	9.9	2.9	1.1	8.6	2.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3464)
HxlR	PF01638.12	gi|429217406|ref|YP_007175396.1|	-	2.1e-23	81.7	0.1	2.6e-23	81.4	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
PadR	PF03551.9	gi|429217406|ref|YP_007175396.1|	-	1.5e-05	24.6	0.0	3.7e-05	23.4	0.0	1.7	1	1	1	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.1	gi|429217406|ref|YP_007175396.1|	-	2.7e-05	24.0	0.0	3.8e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|429217406|ref|YP_007175396.1|	-	0.003	17.3	0.0	0.0052	16.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF505	PF04458.7	gi|429217406|ref|YP_007175396.1|	-	0.0062	14.7	0.0	0.0074	14.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
MarR	PF01047.17	gi|429217406|ref|YP_007175396.1|	-	0.021	14.5	0.0	0.048	13.3	0.0	1.7	1	0	0	1	1	1	0	MarR	family
B-block_TFIIIC	PF04182.7	gi|429217406|ref|YP_007175396.1|	-	0.051	13.4	0.1	0.096	12.5	0.0	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DUF3116	PF11313.3	gi|429217406|ref|YP_007175396.1|	-	0.055	13.0	0.0	0.092	12.3	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
HTH_24	PF13412.1	gi|429217406|ref|YP_007175396.1|	-	0.096	12.0	0.1	0.29	10.5	0.0	1.9	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF4423	PF14394.1	gi|429217406|ref|YP_007175396.1|	-	0.11	11.9	0.0	0.17	11.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Replic_Relax	PF13814.1	gi|429217406|ref|YP_007175396.1|	-	0.12	12.1	0.0	0.16	11.7	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
DoxX	PF07681.7	gi|429217407|ref|YP_007175397.1|	-	2.5e-17	63.0	6.9	3.9e-17	62.4	4.8	1.3	1	0	0	1	1	1	1	DoxX
DoxX_2	PF13564.1	gi|429217407|ref|YP_007175397.1|	-	5.9e-06	26.1	4.2	8.1e-06	25.7	2.9	1.4	1	1	0	1	1	1	1	DoxX-like	family
DoxD	PF04173.8	gi|429217407|ref|YP_007175397.1|	-	0.00012	21.8	6.3	0.00012	21.8	4.4	1.9	2	1	0	2	2	2	1	TQO	small	subunit	DoxD
VKG_Carbox	PF05090.9	gi|429217407|ref|YP_007175397.1|	-	0.0073	15.2	3.7	0.0074	15.1	2.6	1.1	1	0	0	1	1	1	1	Vitamin	K-dependent	gamma-carboxylase
DoxX_3	PF13781.1	gi|429217407|ref|YP_007175397.1|	-	0.3	11.4	5.0	0.56	10.5	3.4	1.6	1	1	0	1	1	1	0	DoxX-like	family
PMT_2	PF13231.1	gi|429217407|ref|YP_007175397.1|	-	2.1	8.2	11.8	0.083	12.7	3.8	1.9	2	1	0	3	3	3	0	Dolichyl-phosphate-mannose-protein	mannosyltransferase
Peptidase_M24	PF00557.19	gi|429217408|ref|YP_007175398.1|	-	8.7e-35	120.1	0.0	1.1e-34	119.7	0.0	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|429217408|ref|YP_007175398.1|	-	9e-10	39.1	0.0	2.1e-09	37.9	0.0	1.6	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Methyltransf_31	PF13847.1	gi|429217409|ref|YP_007175399.1|	-	3.9e-18	65.4	0.1	4.9e-18	65.1	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|429217409|ref|YP_007175399.1|	-	3.6e-16	59.4	0.0	5.2e-16	58.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429217409|ref|YP_007175399.1|	-	2.6e-14	53.7	0.0	3.4e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|429217409|ref|YP_007175399.1|	-	9.7e-13	47.7	0.1	1.2e-12	47.4	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|429217409|ref|YP_007175399.1|	-	9.8e-10	38.0	0.0	1.1e-09	37.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
RrnaAD	PF00398.15	gi|429217409|ref|YP_007175399.1|	-	1.2e-08	34.2	0.1	1.8e-08	33.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_12	PF08242.7	gi|429217409|ref|YP_007175399.1|	-	2e-08	34.5	0.0	4.8e-08	33.3	0.0	1.6	2	0	0	2	2	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|429217409|ref|YP_007175399.1|	-	3e-08	33.4	0.6	4e-08	33.0	0.4	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
PCMT	PF01135.14	gi|429217409|ref|YP_007175399.1|	-	1.7e-07	31.0	0.0	2.4e-07	30.5	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_25	PF13649.1	gi|429217409|ref|YP_007175399.1|	-	5.6e-07	29.8	0.0	8.2e-07	29.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|429217409|ref|YP_007175399.1|	-	1.2e-06	27.5	0.1	1.7e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_8	PF05148.10	gi|429217409|ref|YP_007175399.1|	-	1.4e-05	24.8	0.0	8.6e-05	22.2	0.0	1.9	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_4	PF02390.12	gi|429217409|ref|YP_007175399.1|	-	1.5e-05	24.1	0.1	2.4e-05	23.5	0.1	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
TehB	PF03848.9	gi|429217409|ref|YP_007175399.1|	-	2.7e-05	23.4	0.1	3.2e-05	23.1	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_26	PF13659.1	gi|429217409|ref|YP_007175399.1|	-	3.9e-05	23.6	0.0	4.8e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.10	gi|429217409|ref|YP_007175399.1|	-	4.3e-05	22.7	0.3	7e-05	22.0	0.2	1.3	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
PrmA	PF06325.8	gi|429217409|ref|YP_007175399.1|	-	6e-05	22.3	0.5	7.9e-05	21.9	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
DOT1	PF08123.8	gi|429217409|ref|YP_007175399.1|	-	7e-05	22.2	0.0	9.3e-05	21.8	0.0	1.2	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.1	gi|429217409|ref|YP_007175399.1|	-	0.00016	21.3	0.0	0.00026	20.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.6	gi|429217409|ref|YP_007175399.1|	-	0.00028	19.6	0.0	0.0005	18.8	0.0	1.4	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
FtsJ	PF01728.14	gi|429217409|ref|YP_007175399.1|	-	0.00028	20.9	0.0	0.00038	20.5	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
CMAS	PF02353.15	gi|429217409|ref|YP_007175399.1|	-	0.0005	19.2	0.1	0.00069	18.7	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Nol1_Nop2_Fmu	PF01189.12	gi|429217409|ref|YP_007175399.1|	-	0.0047	16.3	0.0	0.0064	15.9	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_15	PF09445.5	gi|429217409|ref|YP_007175399.1|	-	0.015	14.8	0.1	0.02	14.4	0.1	1.2	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
GCD14	PF08704.5	gi|429217409|ref|YP_007175399.1|	-	0.016	14.6	0.0	0.019	14.4	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DUF938	PF06080.7	gi|429217409|ref|YP_007175399.1|	-	0.038	13.5	0.0	0.064	12.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
Cons_hypoth95	PF03602.10	gi|429217409|ref|YP_007175399.1|	-	0.07	12.5	0.0	0.092	12.1	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_PK	PF05891.7	gi|429217409|ref|YP_007175399.1|	-	0.11	11.7	0.1	0.16	11.2	0.0	1.2	1	0	0	1	1	1	0	AdoMet	dependent	proline	di-methyltransferase
Rifin_STEVOR	PF02009.11	gi|429217410|ref|YP_007175400.1|	-	0.02	14.5	2.6	0.025	14.2	1.8	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
TrbC	PF04956.8	gi|429217410|ref|YP_007175400.1|	-	0.17	11.9	2.8	1.6	8.7	0.6	2.3	2	0	0	2	2	2	0	TrbC/VIRB2	family
TMEM154	PF15102.1	gi|429217410|ref|YP_007175400.1|	-	0.88	9.2	14.4	0.2	11.3	7.2	2.0	1	1	1	2	2	2	0	TMEM154	protein	family
DUF4064	PF13273.1	gi|429217410|ref|YP_007175400.1|	-	1.1	9.4	7.2	0.074	13.1	1.0	2.2	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
TPR_2	PF07719.12	gi|429217411|ref|YP_007175401.1|	-	0.00046	19.9	1.6	0.0056	16.4	0.9	2.6	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|429217411|ref|YP_007175401.1|	-	0.013	15.1	0.8	0.057	13.0	0.3	2.1	2	0	0	2	2	2	0	TPR	repeat
DUF357	PF04010.8	gi|429217411|ref|YP_007175401.1|	-	0.015	15.0	0.1	1	9.1	0.0	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF357)
TPR_12	PF13424.1	gi|429217411|ref|YP_007175401.1|	-	0.015	15.2	2.6	0.017	15.0	0.1	2.3	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|429217411|ref|YP_007175401.1|	-	0.025	15.0	3.0	0.11	12.9	1.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
YfdX	PF10938.3	gi|429217411|ref|YP_007175401.1|	-	0.05	13.2	0.6	1.4	8.5	0.1	2.7	1	1	0	2	2	2	0	YfdX	protein
Apc3	PF12895.2	gi|429217411|ref|YP_007175401.1|	-	0.052	13.6	0.4	0.17	12.0	0.1	2.0	2	0	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.23	gi|429217411|ref|YP_007175401.1|	-	0.063	12.9	2.9	0.1	12.2	1.0	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|429217411|ref|YP_007175401.1|	-	0.14	12.9	0.4	3.9	8.2	0.2	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|429217411|ref|YP_007175401.1|	-	0.15	11.9	1.6	0.45	10.4	1.1	1.8	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
TPR_19	PF14559.1	gi|429217411|ref|YP_007175401.1|	-	0.23	11.8	3.2	6.5	7.1	0.1	3.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
DUF1628	PF07790.6	gi|429217412|ref|YP_007175402.1|	-	2.1	9.1	5.2	5.3	7.8	3.6	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
Sigma_reg_N	PF13800.1	gi|429217412|ref|YP_007175402.1|	-	8.1	6.5	7.5	5.3	7.1	1.4	2.2	1	1	1	2	2	2	0	Sigma	factor	regulator	N-terminal
DUF2122	PF09895.4	gi|429217413|ref|YP_007175403.1|	-	1.2e-31	109.0	0.1	1.5e-31	108.7	0.0	1.1	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
DUF912	PF06024.7	gi|429217414|ref|YP_007175404.1|	-	0.00059	19.8	1.6	0.0012	18.8	1.1	1.5	1	0	0	1	1	1	1	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DUF3753	PF12575.3	gi|429217414|ref|YP_007175404.1|	-	0.13	12.1	2.0	0.24	11.2	1.4	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
Ring_hydroxyl_A	PF00848.14	gi|429217414|ref|YP_007175404.1|	-	0.22	11.1	0.9	0.35	10.5	0.6	1.2	1	0	0	1	1	1	0	Ring	hydroxylating	alpha	subunit	(catalytic	domain)
tRNA-synt_2b	PF00587.20	gi|429217415|ref|YP_007175405.1|	-	3.5e-28	98.3	0.1	7.1e-28	97.3	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|429217415|ref|YP_007175405.1|	-	6.1e-07	29.3	2.2	7.5e-07	29.0	0.7	1.8	2	0	0	2	2	2	1	Anticodon	binding	domain
DUF4488	PF14869.1	gi|429217415|ref|YP_007175405.1|	-	0.067	12.7	0.6	0.14	11.6	0.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4488)
Cadherin-like	PF12733.2	gi|429217416|ref|YP_007175406.1|	-	0.082	13.1	1.1	0.091	13.0	0.8	1.3	1	1	0	1	1	1	0	Cadherin-like	beta	sandwich	domain
tRNA-synt_1	PF00133.17	gi|429217418|ref|YP_007175408.1|	-	4.2e-118	394.9	0.2	5.7e-117	391.2	0.2	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|429217418|ref|YP_007175408.1|	-	2.9e-29	101.9	6.1	2.4e-16	59.4	0.1	4.2	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|429217418|ref|YP_007175408.1|	-	5.9e-20	71.5	5.1	5.9e-20	71.5	3.5	2.0	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|429217418|ref|YP_007175408.1|	-	1.8e-06	27.3	0.0	0.0011	18.3	0.0	3.2	1	1	1	2	2	2	2	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|429217418|ref|YP_007175408.1|	-	0.0096	14.7	1.4	2	7.1	0.0	2.7	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(R)
zf-TFIIB	PF13453.1	gi|429217418|ref|YP_007175408.1|	-	0.087	12.0	3.1	6.6	6.0	0.6	3.5	3	1	1	4	4	4	0	Transcription	factor	zinc-finger
HypA	PF01155.14	gi|429217418|ref|YP_007175408.1|	-	0.16	11.6	0.7	13	5.5	0.0	2.9	3	0	0	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
DNA_ligase_ZBD	PF03119.11	gi|429217418|ref|YP_007175408.1|	-	0.29	10.8	7.2	4.8	6.9	0.2	3.6	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ribbon_3	PF13248.1	gi|429217418|ref|YP_007175408.1|	-	0.5	9.6	5.9	3.8	6.8	0.0	3.0	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|429217418|ref|YP_007175408.1|	-	0.72	9.5	7.5	2.4	7.8	0.0	3.1	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|429217418|ref|YP_007175408.1|	-	3.8	7.1	6.3	18	4.9	0.0	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
DZR	PF12773.2	gi|429217418|ref|YP_007175408.1|	-	6.8	6.5	7.1	22	4.9	0.0	3.3	2	1	0	2	2	2	0	Double	zinc	ribbon
Rubredoxin	PF00301.15	gi|429217418|ref|YP_007175408.1|	-	7.3	6.5	10.0	13	5.7	4.0	3.1	2	1	0	2	2	2	0	Rubredoxin
Pyr_redox_2	PF07992.9	gi|429217419|ref|YP_007175409.1|	-	4.4e-41	140.9	1.8	1.2e-38	133.0	1.2	4.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429217419|ref|YP_007175409.1|	-	1.2e-26	92.9	0.6	6e-22	77.8	0.0	2.9	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|429217419|ref|YP_007175409.1|	-	7.8e-24	83.8	0.0	2.1e-23	82.4	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
GIDA	PF01134.17	gi|429217419|ref|YP_007175409.1|	-	5.6e-16	58.3	0.3	1.1e-07	31.1	0.2	4.1	3	1	1	4	4	4	3	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|429217419|ref|YP_007175409.1|	-	2e-14	52.8	2.1	8.3e-07	27.8	0.1	4.1	3	1	1	4	4	4	3	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|429217419|ref|YP_007175409.1|	-	2.2e-11	44.2	0.0	9.8e-09	35.5	0.0	2.9	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|429217419|ref|YP_007175409.1|	-	1.9e-10	40.2	0.0	1.1e-05	24.5	0.0	3.1	3	1	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|429217419|ref|YP_007175409.1|	-	4.1e-10	39.3	0.0	3.7e-09	36.1	0.0	2.3	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|429217419|ref|YP_007175409.1|	-	4.1e-08	32.4	0.1	9.9e-07	27.9	0.0	2.7	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|429217419|ref|YP_007175409.1|	-	1.3e-07	31.5	0.7	0.0011	18.9	0.2	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|429217419|ref|YP_007175409.1|	-	6.7e-07	28.5	0.2	0.0019	17.1	0.1	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
AlaDh_PNT_C	PF01262.16	gi|429217419|ref|YP_007175409.1|	-	9.3e-06	25.3	0.0	0.024	14.1	0.0	2.4	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
K_oxygenase	PF13434.1	gi|429217419|ref|YP_007175409.1|	-	1.7e-05	23.9	0.0	0.0073	15.2	0.0	3.0	2	1	0	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Thi4	PF01946.12	gi|429217419|ref|YP_007175409.1|	-	3.5e-05	23.0	0.0	0.013	14.5	0.0	2.6	2	0	0	2	2	2	1	Thi4	family
XdhC_C	PF13478.1	gi|429217419|ref|YP_007175409.1|	-	7.5e-05	23.0	0.0	0.22	11.8	0.0	3.2	3	1	0	3	3	3	2	XdhC	Rossmann	domain
NAD_binding_7	PF13241.1	gi|429217419|ref|YP_007175409.1|	-	0.00023	21.3	0.0	0.15	12.3	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|429217419|ref|YP_007175409.1|	-	0.00069	19.0	0.1	0.043	13.1	0.0	2.6	2	1	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|429217419|ref|YP_007175409.1|	-	0.0011	18.6	0.0	0.051	13.2	0.0	2.4	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.14	gi|429217419|ref|YP_007175409.1|	-	0.0016	17.5	0.1	0.07	12.1	0.1	2.2	2	0	0	2	2	2	1	FAD	binding	domain
TrkA_N	PF02254.13	gi|429217419|ref|YP_007175409.1|	-	0.0036	17.2	0.1	0.98	9.4	0.0	2.9	2	1	0	2	2	2	1	TrkA-N	domain
Trp_halogenase	PF04820.9	gi|429217419|ref|YP_007175409.1|	-	0.005	15.5	0.1	0.035	12.7	0.0	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
2-Hacid_dh_C	PF02826.14	gi|429217419|ref|YP_007175409.1|	-	0.035	13.2	0.0	0.6	9.2	0.0	2.5	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|429217419|ref|YP_007175409.1|	-	0.063	13.0	0.0	7.3	6.3	0.0	3.4	4	0	0	4	4	4	0	FAD-NAD(P)-binding
DUF4319	PF14203.1	gi|429217419|ref|YP_007175409.1|	-	0.088	12.3	0.2	0.57	9.7	0.0	2.3	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4319)
Ldh_1_N	PF00056.18	gi|429217420|ref|YP_007175410.1|	-	3.3e-38	130.6	0.6	4.8e-38	130.1	0.4	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|429217420|ref|YP_007175410.1|	-	3.9e-24	85.3	0.0	6e-24	84.6	0.0	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
Glyco_hydro_4	PF02056.11	gi|429217420|ref|YP_007175410.1|	-	3.4e-05	23.2	0.0	7.9e-05	22.0	0.0	1.6	1	0	0	1	1	1	1	Family	4	glycosyl	hydrolase
CoA_binding	PF02629.14	gi|429217420|ref|YP_007175410.1|	-	0.026	15.0	0.3	0.25	11.8	0.1	2.3	1	1	1	2	2	2	0	CoA	binding	domain
NAD_binding_10	PF13460.1	gi|429217420|ref|YP_007175410.1|	-	0.078	12.9	1.7	0.36	10.8	1.2	2.1	1	1	0	1	1	1	0	NADH(P)-binding
FUR	PF01475.14	gi|429217421|ref|YP_007175411.1|	-	4.2e-19	68.6	0.8	5.4e-19	68.2	0.6	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
DUF2703	PF10865.3	gi|429217421|ref|YP_007175411.1|	-	0.013	15.4	0.1	0.84	9.5	0.0	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2703)
Phage_cap_E	PF03864.10	gi|429217421|ref|YP_007175411.1|	-	0.061	12.2	0.0	0.062	12.2	0.0	1.1	1	0	0	1	1	1	0	Phage	major	capsid	protein	E
4HBT	PF03061.17	gi|429217422|ref|YP_007175412.1|	-	5.1e-19	68.1	0.1	4.8e-11	42.6	0.0	2.3	2	0	0	2	2	2	2	Thioesterase	superfamily
MaoC_dehydratas	PF01575.14	gi|429217422|ref|YP_007175412.1|	-	0.00096	18.5	0.1	0.35	10.2	0.0	2.4	2	0	0	2	2	2	2	MaoC	like	domain
4HBT_2	PF13279.1	gi|429217422|ref|YP_007175412.1|	-	0.0013	19.2	0.0	0.0034	17.8	0.0	1.6	2	0	0	2	2	2	1	Thioesterase-like	superfamily
DUF874	PF05917.6	gi|429217422|ref|YP_007175412.1|	-	0.15	10.9	1.5	0.31	9.8	0.3	1.9	2	0	0	2	2	2	0	Helicobacter	pylori	protein	of	unknown	function	(DUF874)
TGT	PF01702.13	gi|429217423|ref|YP_007175413.1|	-	1.1e-52	178.6	0.0	1.6e-52	178.2	0.0	1.2	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF3912	PF13051.1	gi|429217423|ref|YP_007175413.1|	-	0.054	13.2	0.1	0.19	11.4	0.1	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3912)
Lsm_C	PF14894.1	gi|429217424|ref|YP_007175414.1|	-	5.7e-25	86.6	0.5	8.6e-25	86.0	0.3	1.3	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.17	gi|429217424|ref|YP_007175414.1|	-	3.5e-08	32.8	0.1	8.9e-08	31.5	0.0	1.7	1	1	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|429217424|ref|YP_007175414.1|	-	0.012	15.4	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	0	Ataxin	2	SM	domain
FAINT	PF04385.10	gi|429217424|ref|YP_007175414.1|	-	0.1	12.4	0.8	0.19	11.6	0.2	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function,	DUF529
4HBT_2	PF13279.1	gi|429217425|ref|YP_007175415.1|	-	3.1e-09	37.3	0.0	3.6e-09	37.0	0.0	1.0	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.17	gi|429217425|ref|YP_007175415.1|	-	1.1e-08	35.1	0.0	5.4e-08	32.8	0.0	1.8	2	0	0	2	2	2	1	Thioesterase	superfamily
EF-hand_4	PF12763.2	gi|429217425|ref|YP_007175415.1|	-	0.082	12.6	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Cytoskeletal-regulatory	complex	EF	hand
RPA_C	PF08784.6	gi|429217426|ref|YP_007175416.1|	-	0.016	15.5	0.1	0.035	14.5	0.1	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF1628	PF07790.6	gi|429217427|ref|YP_007175417.1|	-	0.004	17.8	3.0	0.019	15.7	2.4	1.9	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1628)
T2SF	PF00482.18	gi|429217428|ref|YP_007175418.1|	-	0.00089	19.1	0.4	0.00089	19.1	0.3	2.6	3	0	0	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
T2SF	PF00482.18	gi|429217429|ref|YP_007175419.1|	-	0.00013	21.8	0.2	0.00013	21.8	0.1	2.7	3	0	0	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
DUF3136	PF11334.3	gi|429217429|ref|YP_007175419.1|	-	0.13	11.7	0.0	2.7	7.5	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3136)
Thiolase_N	PF00108.18	gi|429217430|ref|YP_007175420.1|	-	3.7e-76	255.5	0.0	4.6e-76	255.2	0.0	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|429217430|ref|YP_007175420.1|	-	2.9e-40	136.5	0.1	2e-39	133.7	0.0	2.1	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|429217430|ref|YP_007175420.1|	-	0.00084	18.8	0.1	0.0015	18.0	0.1	1.4	1	0	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|429217430|ref|YP_007175420.1|	-	0.049	13.2	1.3	0.37	10.4	0.4	2.2	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Meth_synt_1	PF08267.7	gi|429217431|ref|YP_007175421.1|	-	4.9e-35	121.3	0.0	2.3e-33	115.8	0.0	2.1	1	1	1	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|429217431|ref|YP_007175421.1|	-	3.8e-15	55.7	0.0	5.7e-15	55.1	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
ATP13	PF12921.2	gi|429217431|ref|YP_007175421.1|	-	0.0027	17.0	0.1	0.0082	15.4	0.0	1.8	2	0	0	2	2	2	1	Mitochondrial	ATPase	expression
Meth_synt_2	PF01717.13	gi|429217432|ref|YP_007175422.1|	-	1.3e-85	287.3	0.0	1.4e-85	287.1	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|429217432|ref|YP_007175422.1|	-	1.2e-24	87.1	0.3	1.9e-17	63.4	0.0	2.0	1	1	1	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
MinE	PF03776.9	gi|429217432|ref|YP_007175422.1|	-	0.0061	16.0	0.9	3.1	7.3	0.2	2.7	2	0	0	2	2	2	2	Septum	formation	topological	specificity	factor	MinE
AIRS_C	PF02769.17	gi|429217433|ref|YP_007175423.1|	-	2.1e-18	66.7	0.0	3.3e-18	66.1	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|429217433|ref|YP_007175423.1|	-	6e-06	26.4	0.0	1.5e-05	25.1	0.0	1.7	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
Biotin_lipoyl_2	PF13533.1	gi|429217433|ref|YP_007175423.1|	-	0.077	12.6	0.0	13	5.5	0.0	2.4	2	0	0	2	2	2	0	Biotin-lipoyl	like
AAA_18	PF13238.1	gi|429217434|ref|YP_007175424.1|	-	8e-20	71.4	1.5	9.6e-20	71.1	0.2	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|429217434|ref|YP_007175424.1|	-	1.2e-14	55.1	1.4	4.7e-14	53.2	1.0	1.9	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|429217434|ref|YP_007175424.1|	-	5.1e-08	32.9	0.0	7.2e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	Shikimate	kinase
AAA	PF00004.24	gi|429217434|ref|YP_007175424.1|	-	1.8e-06	28.1	0.1	1e-05	25.7	0.0	2.0	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|429217434|ref|YP_007175424.1|	-	0.00013	21.7	0.0	0.00019	21.1	0.0	1.3	1	0	0	1	1	1	1	NTPase
Thymidylate_kin	PF02223.12	gi|429217434|ref|YP_007175424.1|	-	0.00018	20.9	0.1	0.31	10.3	0.0	2.2	2	0	0	2	2	2	2	Thymidylate	kinase
AAA_22	PF13401.1	gi|429217434|ref|YP_007175424.1|	-	0.00033	20.8	0.0	0.00084	19.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|429217434|ref|YP_007175424.1|	-	0.00054	19.1	0.0	0.0015	17.6	0.0	1.8	1	1	0	1	1	1	1	Zeta	toxin
RuvB_N	PF05496.7	gi|429217434|ref|YP_007175424.1|	-	0.00069	18.7	0.0	0.0011	18.0	0.0	1.2	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
ABC_tran	PF00005.22	gi|429217434|ref|YP_007175424.1|	-	0.0011	19.3	0.0	0.0016	18.7	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
AAA_5	PF07728.9	gi|429217434|ref|YP_007175424.1|	-	0.0011	18.6	0.0	0.0021	17.8	0.0	1.6	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.1	gi|429217434|ref|YP_007175424.1|	-	0.0012	18.8	0.1	0.0027	17.6	0.0	1.6	2	1	0	2	2	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|429217434|ref|YP_007175424.1|	-	0.0017	18.4	0.0	0.014	15.6	0.0	2.1	2	0	0	2	2	2	1	RNA	helicase
AAA_10	PF12846.2	gi|429217434|ref|YP_007175424.1|	-	0.0019	17.7	0.3	0.004	16.6	0.2	1.8	1	1	0	1	1	1	1	AAA-like	domain
AAA_33	PF13671.1	gi|429217434|ref|YP_007175424.1|	-	0.0023	17.8	0.0	0.0072	16.2	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|429217434|ref|YP_007175424.1|	-	0.0027	17.6	0.3	0.0045	16.8	0.2	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|429217434|ref|YP_007175424.1|	-	0.0034	17.0	0.0	0.0058	16.3	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
Cytidylate_kin2	PF13189.1	gi|429217434|ref|YP_007175424.1|	-	0.0034	17.3	0.1	0.0068	16.3	0.1	1.8	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_16	PF13191.1	gi|429217434|ref|YP_007175424.1|	-	0.0067	16.4	0.0	0.012	15.5	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF2075	PF09848.4	gi|429217434|ref|YP_007175424.1|	-	0.008	15.1	0.1	0.0085	15.1	0.1	1.5	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|429217434|ref|YP_007175424.1|	-	0.012	14.7	0.4	0.53	9.3	0.1	2.2	2	0	0	2	2	2	0	KaiC
DUF87	PF01935.12	gi|429217434|ref|YP_007175424.1|	-	0.015	15.1	0.3	0.32	10.7	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
KTI12	PF08433.5	gi|429217434|ref|YP_007175424.1|	-	0.017	14.3	0.0	0.027	13.6	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
NB-ARC	PF00931.17	gi|429217434|ref|YP_007175424.1|	-	0.021	13.6	0.0	0.034	13.0	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
ADK	PF00406.17	gi|429217434|ref|YP_007175424.1|	-	0.023	14.5	0.2	0.35	10.7	0.1	2.3	1	1	0	1	1	1	0	Adenylate	kinase
NACHT	PF05729.7	gi|429217434|ref|YP_007175424.1|	-	0.024	14.2	0.0	0.056	13.1	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
Guanylate_kin	PF00625.16	gi|429217434|ref|YP_007175424.1|	-	0.025	14.0	0.2	0.3	10.5	0.0	2.0	2	0	0	2	2	2	0	Guanylate	kinase
Arch_ATPase	PF01637.13	gi|429217434|ref|YP_007175424.1|	-	0.027	14.1	1.6	0.037	13.7	1.1	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_3	PF07726.6	gi|429217434|ref|YP_007175424.1|	-	0.028	14.0	0.0	0.1	12.1	0.0	1.9	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
APS_kinase	PF01583.15	gi|429217434|ref|YP_007175424.1|	-	0.044	13.4	0.0	0.091	12.4	0.0	1.5	1	1	0	1	1	1	0	Adenylylsulphate	kinase
T2SE	PF00437.15	gi|429217434|ref|YP_007175424.1|	-	0.047	12.5	0.0	0.073	11.9	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_30	PF13604.1	gi|429217434|ref|YP_007175424.1|	-	0.061	12.8	0.0	0.079	12.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|429217434|ref|YP_007175424.1|	-	0.065	12.6	0.2	0.2	11.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
CoaE	PF01121.15	gi|429217434|ref|YP_007175424.1|	-	0.079	12.3	0.0	0.35	10.2	0.0	1.8	1	1	1	2	2	2	0	Dephospho-CoA	kinase
ArgK	PF03308.11	gi|429217434|ref|YP_007175424.1|	-	0.087	11.5	0.0	0.33	9.7	0.0	1.8	2	0	0	2	2	2	0	ArgK	protein
DUF258	PF03193.11	gi|429217434|ref|YP_007175424.1|	-	0.14	11.3	0.0	0.23	10.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|429217435|ref|YP_007175425.1|	-	1.8e-29	103.1	1.0	4.5e-29	101.8	0.4	1.9	2	0	0	2	2	2	1	AAA-like	domain
DUF87	PF01935.12	gi|429217435|ref|YP_007175425.1|	-	1.3e-19	70.9	1.3	1.3e-19	70.9	0.9	2.2	3	0	0	3	3	3	1	Domain	of	unknown	function	DUF87
TrwB_AAD_bind	PF10412.4	gi|429217435|ref|YP_007175425.1|	-	4.6e-08	32.1	0.0	0.00028	19.6	0.0	2.8	3	0	0	3	3	3	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|429217435|ref|YP_007175425.1|	-	4.7e-07	28.5	0.0	0.00065	18.1	0.0	2.6	3	0	0	3	3	3	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_22	PF13401.1	gi|429217435|ref|YP_007175425.1|	-	5e-06	26.6	1.2	0.033	14.3	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
Zot	PF05707.7	gi|429217435|ref|YP_007175425.1|	-	1e-05	25.0	0.3	7.1e-05	22.3	0.0	2.3	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
ABC_tran	PF00005.22	gi|429217435|ref|YP_007175425.1|	-	0.00025	21.3	0.7	0.034	14.4	0.0	2.7	2	1	0	2	2	2	1	ABC	transporter
AAA_17	PF13207.1	gi|429217435|ref|YP_007175425.1|	-	0.00037	21.3	0.9	0.0042	17.9	0.2	2.9	2	1	0	2	2	2	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|429217435|ref|YP_007175425.1|	-	0.0004	19.9	0.0	0.0018	17.8	0.0	1.9	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
NB-ARC	PF00931.17	gi|429217435|ref|YP_007175425.1|	-	0.004	16.0	0.5	0.72	8.6	0.0	3.1	3	0	0	3	3	3	1	NB-ARC	domain
AAA	PF00004.24	gi|429217435|ref|YP_007175425.1|	-	0.0063	16.7	0.7	2.7	8.2	0.5	3.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.14	gi|429217435|ref|YP_007175425.1|	-	0.015	14.5	2.5	1.2	8.2	0.1	2.7	3	0	0	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
CbiA	PF01656.18	gi|429217435|ref|YP_007175425.1|	-	0.02	14.2	0.1	0.081	12.3	0.0	2.2	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
TraG-D_C	PF12696.2	gi|429217435|ref|YP_007175425.1|	-	0.024	14.4	2.4	0.026	14.3	0.0	2.2	3	0	0	3	3	2	0	TraM	recognition	site	of	TraD	and	TraG
AAA_25	PF13481.1	gi|429217435|ref|YP_007175425.1|	-	0.057	12.8	0.0	0.2	11.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|429217435|ref|YP_007175425.1|	-	0.065	12.7	0.1	0.13	11.7	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ResIII	PF04851.10	gi|429217435|ref|YP_007175425.1|	-	0.13	12.1	4.7	0.43	10.3	1.0	2.8	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.1	gi|429217435|ref|YP_007175425.1|	-	0.19	12.0	7.2	0.042	14.1	0.4	3.2	2	2	0	2	2	2	0	AAA	domain
DUF262	PF03235.9	gi|429217435|ref|YP_007175425.1|	-	0.36	10.7	7.7	2.8	7.8	0.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF262
Oxidored_molyb	PF00174.14	gi|429217436|ref|YP_007175426.1|	-	7.8e-31	106.7	0.0	1.1e-30	106.2	0.0	1.2	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Aldedh	PF00171.17	gi|429217437|ref|YP_007175427.1|	-	7.9e-112	373.9	0.0	9.4e-112	373.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|429217437|ref|YP_007175427.1|	-	9.6e-05	21.2	0.0	0.00023	20.0	0.0	1.6	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Ribosomal_S13	PF00416.17	gi|429217437|ref|YP_007175427.1|	-	0.056	13.8	0.8	0.26	11.7	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	S13/S18
DUF2827	PF10933.3	gi|429217438|ref|YP_007175428.1|	-	0.051	12.0	0.0	0.073	11.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2827)
DUF3733	PF12534.3	gi|429217438|ref|YP_007175428.1|	-	1.4	8.2	5.8	2.9	7.2	0.9	2.5	2	0	0	2	2	2	0	Leucine-rich	repeat	containing	protein	8
PAC2	PF09754.4	gi|429217439|ref|YP_007175429.1|	-	8.8e-28	97.6	0.0	1.1e-27	97.3	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Flagellar_rod	PF05149.7	gi|429217439|ref|YP_007175429.1|	-	0.041	13.0	0.2	0.053	12.7	0.1	1.1	1	0	0	1	1	1	0	Paraflagellar	rod	protein
CbiK	PF06180.6	gi|429217439|ref|YP_007175429.1|	-	0.073	12.1	0.1	0.1	11.6	0.0	1.3	1	0	0	1	1	1	0	Cobalt	chelatase	(CbiK)
TGT_C2	PF14810.1	gi|429217440|ref|YP_007175430.1|	-	5.4e-17	61.3	0.2	1.1e-16	60.3	0.0	1.6	2	0	0	2	2	2	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.15	gi|429217440|ref|YP_007175430.1|	-	5.4e-09	35.6	1.4	8e-09	35.1	1.0	1.3	1	0	0	1	1	1	1	PUA	domain
Antitoxin-MazE	PF04014.13	gi|429217440|ref|YP_007175430.1|	-	0.16	11.6	3.4	0.47	10.2	0.3	2.6	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE
Sua5_yciO_yrdC	PF01300.13	gi|429217441|ref|YP_007175431.1|	-	2.6e-48	163.6	0.0	3.1e-48	163.3	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
OTCace	PF00185.19	gi|429217442|ref|YP_007175432.1|	-	1.1e-50	171.5	0.0	1.9e-50	170.8	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|429217442|ref|YP_007175432.1|	-	7.4e-46	155.3	0.0	1.1e-45	154.7	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
KaiC	PF06745.8	gi|429217443|ref|YP_007175433.1|	-	8.8e-52	175.4	1.5	1e-51	175.2	0.3	1.5	2	0	0	2	2	2	1	KaiC
AAA_14	PF13173.1	gi|429217443|ref|YP_007175433.1|	-	1e-06	28.6	0.8	1e-06	28.6	0.6	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|429217443|ref|YP_007175433.1|	-	1.4e-06	27.8	0.0	5e-05	22.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
GvpD	PF07088.6	gi|429217443|ref|YP_007175433.1|	-	3e-05	22.5	4.1	0.00048	18.5	2.9	2.2	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_18	PF13238.1	gi|429217443|ref|YP_007175433.1|	-	4.1e-05	23.8	0.1	4.1e-05	23.8	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|429217443|ref|YP_007175433.1|	-	5e-05	23.4	0.2	0.00014	21.9	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|429217443|ref|YP_007175433.1|	-	0.00015	20.9	0.0	0.00021	20.3	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Arch_ATPase	PF01637.13	gi|429217443|ref|YP_007175433.1|	-	0.00021	21.0	1.6	0.00021	21.0	1.1	1.9	2	1	0	2	2	2	1	Archaeal	ATPase
AAA_17	PF13207.1	gi|429217443|ref|YP_007175433.1|	-	0.00034	21.4	1.6	0.0021	18.8	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.1	gi|429217443|ref|YP_007175433.1|	-	0.0005	19.7	1.1	0.12	11.9	0.2	2.4	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|429217443|ref|YP_007175433.1|	-	0.0023	17.0	0.0	0.0043	16.1	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
ABC_tran	PF00005.22	gi|429217443|ref|YP_007175433.1|	-	0.014	15.6	0.2	0.034	14.4	0.0	1.8	2	0	0	2	2	2	0	ABC	transporter
AAA_19	PF13245.1	gi|429217443|ref|YP_007175433.1|	-	0.015	15.0	0.0	0.029	14.1	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
DnaB_C	PF03796.10	gi|429217443|ref|YP_007175433.1|	-	0.024	13.5	0.0	0.037	12.9	0.0	1.4	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_16	PF13191.1	gi|429217443|ref|YP_007175433.1|	-	0.026	14.5	0.0	0.053	13.5	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.24	gi|429217443|ref|YP_007175433.1|	-	0.035	14.3	0.5	0.12	12.6	0.3	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.4	gi|429217443|ref|YP_007175433.1|	-	0.053	12.1	0.0	0.12	10.9	0.0	1.5	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Miro	PF08477.8	gi|429217443|ref|YP_007175433.1|	-	0.062	13.7	0.0	0.22	12.0	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
SRPRB	PF09439.5	gi|429217443|ref|YP_007175433.1|	-	0.071	12.3	0.3	0.43	9.7	0.2	2.1	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
Sigma54_activat	PF00158.21	gi|429217443|ref|YP_007175433.1|	-	0.11	11.9	0.0	0.24	10.8	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
T2SE	PF00437.15	gi|429217443|ref|YP_007175433.1|	-	0.13	11.1	0.0	0.25	10.1	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
IstB_IS21	PF01695.12	gi|429217443|ref|YP_007175433.1|	-	0.16	11.3	0.0	0.31	10.4	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
NACHT	PF05729.7	gi|429217443|ref|YP_007175433.1|	-	0.26	10.9	1.9	1.8	8.1	0.9	2.5	2	1	0	2	2	2	0	NACHT	domain
DUF3227	PF11537.3	gi|429217444|ref|YP_007175434.1|	-	0.049	13.7	0.1	0.055	13.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3227)
DBR1	PF05011.8	gi|429217445|ref|YP_007175435.1|	-	0.074	12.9	0.0	0.15	11.9	0.0	1.5	1	1	1	2	2	2	0	Lariat	debranching	enzyme,	C-terminal	domain
RasGAP	PF00616.14	gi|429217445|ref|YP_007175435.1|	-	0.076	12.6	0.6	0.094	12.3	0.4	1.0	1	0	0	1	1	1	0	GTPase-activator	protein	for	Ras-like	GTPase
ParB	PF08775.5	gi|429217445|ref|YP_007175435.1|	-	0.22	11.8	1.4	0.65	10.3	0.3	1.8	2	0	0	2	2	2	0	ParB	family
Peptidase_M50	PF02163.17	gi|429217446|ref|YP_007175436.1|	-	5.5e-14	51.5	12.7	6.6e-13	48.0	8.8	2.2	1	1	0	1	1	1	1	Peptidase	family	M50
TctB	PF07331.6	gi|429217446|ref|YP_007175436.1|	-	5.4	6.6	15.4	2	8.0	8.0	2.3	1	1	1	2	2	2	0	Tripartite	tricarboxylate	transporter	TctB	family
CTP_transf_2	PF01467.21	gi|429217447|ref|YP_007175437.1|	-	6.3e-12	45.8	0.0	9.7e-12	45.2	0.0	1.3	1	1	0	1	1	1	1	Cytidylyltransferase
eRF1_2	PF03464.10	gi|429217448|ref|YP_007175438.1|	-	8.4e-38	129.7	0.2	1.5e-37	128.8	0.1	1.4	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|429217448|ref|YP_007175438.1|	-	1.3e-21	76.9	0.4	1.6e-19	70.2	0.0	3.3	3	1	0	3	3	3	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|429217448|ref|YP_007175438.1|	-	1.7e-15	56.7	0.0	3.6e-15	55.6	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	1
DUF977	PF06163.6	gi|429217450|ref|YP_007175440.1|	-	0.061	13.0	0.0	0.084	12.6	0.0	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
Stork_head	PF10264.4	gi|429217450|ref|YP_007175440.1|	-	0.14	12.2	0.0	0.85	9.8	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	Storkhead-box1	domain
HTH_45	PF14947.1	gi|429217452|ref|YP_007175442.1|	-	0.003	17.3	1.1	0.011	15.5	0.6	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|429217452|ref|YP_007175442.1|	-	0.014	15.3	0.0	0.035	14.0	0.0	1.7	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4093	PF13331.1	gi|429217452|ref|YP_007175442.1|	-	0.033	14.3	0.1	0.066	13.4	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4093)
HTH_45	PF14947.1	gi|429217453|ref|YP_007175443.1|	-	3.9e-06	26.5	0.5	0.00037	20.2	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_5	PF01022.15	gi|429217453|ref|YP_007175443.1|	-	0.0011	18.6	0.0	0.0027	17.3	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
GAD-like	PF08887.6	gi|429217453|ref|YP_007175443.1|	-	0.048	13.7	0.0	0.11	12.6	0.0	1.6	1	0	0	1	1	1	0	GAD-like	domain
CheZ	PF04344.8	gi|429217453|ref|YP_007175443.1|	-	0.078	12.6	0.3	0.15	11.6	0.1	1.7	2	0	0	2	2	2	0	Chemotaxis	phosphatase,	CheZ
Rrf2	PF02082.15	gi|429217453|ref|YP_007175443.1|	-	0.089	12.9	0.0	6.1	7.0	0.0	2.5	2	0	0	2	2	2	0	Transcriptional	regulator
AAA	PF00004.24	gi|429217454|ref|YP_007175444.1|	-	9.8e-43	145.5	0.2	2e-42	144.5	0.0	1.6	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|429217454|ref|YP_007175444.1|	-	9.9e-07	28.9	0.1	0.00024	21.1	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_2	PF07724.9	gi|429217454|ref|YP_007175444.1|	-	1e-06	28.7	0.0	3.1e-06	27.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.9	gi|429217454|ref|YP_007175444.1|	-	7.6e-06	25.7	0.2	5.1e-05	23.0	0.1	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|429217454|ref|YP_007175444.1|	-	6.6e-05	22.0	0.0	0.00014	21.0	0.0	1.6	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|429217454|ref|YP_007175444.1|	-	0.00012	22.2	0.2	0.0022	18.1	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|429217454|ref|YP_007175444.1|	-	0.00077	18.9	1.1	0.03	13.7	0.1	2.7	2	1	1	3	3	3	1	AAA	domain
AAA_17	PF13207.1	gi|429217454|ref|YP_007175444.1|	-	0.0016	19.2	1.5	0.0054	17.5	0.2	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|429217454|ref|YP_007175444.1|	-	0.0019	18.1	0.0	0.0045	16.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|429217454|ref|YP_007175444.1|	-	0.0028	17.0	0.0	0.005	16.2	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DUF815	PF05673.8	gi|429217454|ref|YP_007175444.1|	-	0.0031	16.4	0.0	0.0062	15.4	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_24	PF13479.1	gi|429217454|ref|YP_007175444.1|	-	0.0032	17.0	0.1	0.006	16.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|429217454|ref|YP_007175444.1|	-	0.0041	17.2	0.0	0.012	15.7	0.0	1.8	1	0	0	1	1	1	1	RNA	helicase
Mg_chelatase	PF01078.16	gi|429217454|ref|YP_007175444.1|	-	0.0057	15.8	0.1	0.012	14.7	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.1	gi|429217454|ref|YP_007175444.1|	-	0.0066	16.3	0.0	0.017	14.9	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
AAA_19	PF13245.1	gi|429217454|ref|YP_007175444.1|	-	0.0068	16.1	0.1	0.014	15.1	0.1	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_3	PF07726.6	gi|429217454|ref|YP_007175444.1|	-	0.0071	15.9	0.0	0.017	14.7	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|429217454|ref|YP_007175444.1|	-	0.0088	16.3	0.2	0.097	12.9	0.0	2.6	2	1	0	2	2	2	1	ABC	transporter
Zeta_toxin	PF06414.7	gi|429217454|ref|YP_007175444.1|	-	0.0091	15.1	0.0	0.021	13.9	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
AAA_18	PF13238.1	gi|429217454|ref|YP_007175444.1|	-	0.0092	16.2	0.0	0.036	14.3	0.0	2.1	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|429217454|ref|YP_007175444.1|	-	0.0097	15.8	0.0	0.018	14.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|429217454|ref|YP_007175444.1|	-	0.01	15.5	0.1	0.092	12.4	0.1	2.2	1	1	0	1	1	1	0	NACHT	domain
TIP49	PF06068.8	gi|429217454|ref|YP_007175444.1|	-	0.014	14.1	0.0	0.03	13.0	0.0	1.5	1	0	0	1	1	1	0	TIP49	C-terminus
KaiC	PF06745.8	gi|429217454|ref|YP_007175444.1|	-	0.051	12.6	0.1	0.33	10.0	0.0	2.3	1	1	2	3	3	2	0	KaiC
Parvo_NS1	PF01057.12	gi|429217454|ref|YP_007175444.1|	-	0.13	11.1	0.0	0.41	9.4	0.0	1.7	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
DUF2075	PF09848.4	gi|429217454|ref|YP_007175444.1|	-	0.13	11.2	0.0	0.2	10.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Arch_ATPase	PF01637.13	gi|429217454|ref|YP_007175444.1|	-	0.97	9.0	6.5	1.5	8.4	0.0	3.0	3	1	0	4	4	4	0	Archaeal	ATPase
DNA_methylase	PF00145.12	gi|429217455|ref|YP_007175445.1|	-	1.8e-49	168.6	0.0	3.3e-34	118.5	0.0	2.0	1	1	1	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_26	PF13659.1	gi|429217455|ref|YP_007175445.1|	-	9.7e-06	25.6	0.0	3.3e-05	23.8	0.0	1.8	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|429217455|ref|YP_007175445.1|	-	0.0006	19.3	0.0	0.00098	18.7	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.10	gi|429217455|ref|YP_007175445.1|	-	0.024	14.0	0.0	0.049	13.0	0.0	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
TFIIE_alpha	PF02002.12	gi|429217456|ref|YP_007175446.1|	-	2.8e-17	62.1	4.1	5.6e-17	61.1	0.2	2.2	2	1	0	2	2	2	1	TFIIE	alpha	subunit
TF_Zn_Ribbon	PF08271.7	gi|429217456|ref|YP_007175446.1|	-	2.8e-05	23.3	0.6	6.5e-05	22.1	0.4	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
CPSase_L_D3	PF02787.14	gi|429217456|ref|YP_007175446.1|	-	0.03	14.0	0.4	0.052	13.3	0.0	1.5	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CpXC	PF14353.1	gi|429217456|ref|YP_007175446.1|	-	0.045	13.7	0.6	0.12	12.3	0.0	2.0	2	1	1	3	3	3	0	CpXC	protein
RNA_POL_M_15KD	PF02150.11	gi|429217456|ref|YP_007175446.1|	-	0.056	13.1	0.2	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DUF2296	PF10058.4	gi|429217456|ref|YP_007175446.1|	-	0.082	12.6	0.5	0.32	10.7	0.1	2.1	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Tropomyosin_1	PF12718.2	gi|429217456|ref|YP_007175446.1|	-	0.1	12.4	0.5	0.1	12.4	0.3	1.8	2	0	0	2	2	2	0	Tropomyosin	like
DUF1610	PF07754.6	gi|429217456|ref|YP_007175446.1|	-	2	8.6	5.3	0.83	9.8	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Trm56	PF01994.11	gi|429217457|ref|YP_007175447.1|	-	5.4e-47	158.4	0.1	6.7e-47	158.1	0.1	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.14	gi|429217457|ref|YP_007175447.1|	-	0.011	15.5	0.0	0.015	15.2	0.0	1.1	1	0	0	1	1	1	0	SpoU	rRNA	Methylase	family
MMR_HSR1	PF01926.18	gi|429217458|ref|YP_007175448.1|	-	1.5e-17	63.5	0.4	3.9e-17	62.2	0.1	1.8	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|429217458|ref|YP_007175448.1|	-	8e-10	38.2	0.4	1.6e-09	37.2	0.3	1.5	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|429217458|ref|YP_007175448.1|	-	2.9e-09	36.6	0.3	1.5e-07	31.0	0.2	2.4	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP-bdg_N	PF13167.1	gi|429217458|ref|YP_007175448.1|	-	0.00012	22.0	0.1	0.00012	22.0	0.1	2.7	2	1	0	2	2	2	1	GTP-binding	GTPase	N-terminal
Miro	PF08477.8	gi|429217458|ref|YP_007175448.1|	-	0.00015	22.2	0.0	0.00041	20.8	0.0	1.8	1	0	0	1	1	1	1	Miro-like	protein
Gtr1_RagA	PF04670.7	gi|429217458|ref|YP_007175448.1|	-	0.00064	18.9	0.1	0.001	18.2	0.0	1.3	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
PduV-EutP	PF10662.4	gi|429217458|ref|YP_007175448.1|	-	0.00092	18.7	1.5	0.0043	16.5	1.0	2.0	1	1	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
Dynamin_N	PF00350.18	gi|429217458|ref|YP_007175448.1|	-	0.0048	16.7	0.3	0.098	12.4	0.0	2.4	1	1	1	2	2	2	1	Dynamin	family
SRPRB	PF09439.5	gi|429217458|ref|YP_007175448.1|	-	0.013	14.7	0.1	0.029	13.5	0.1	1.6	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
NOG1	PF06858.9	gi|429217458|ref|YP_007175448.1|	-	0.063	13.1	0.3	0.063	13.1	0.2	2.6	3	0	0	3	3	3	0	Nucleolar	GTP-binding	protein	1	(NOG1)
ABC_tran	PF00005.22	gi|429217458|ref|YP_007175448.1|	-	0.094	13.0	0.1	0.27	11.5	0.0	1.7	1	1	0	1	1	1	0	ABC	transporter
HTH_3	PF01381.17	gi|429217459|ref|YP_007175449.1|	-	3e-10	39.7	2.7	5.4e-10	38.9	1.9	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.1	gi|429217459|ref|YP_007175449.1|	-	1.5e-09	37.8	0.0	2.3e-09	37.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|429217459|ref|YP_007175449.1|	-	1.8e-09	37.5	0.6	3.4e-09	36.6	0.4	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|429217459|ref|YP_007175449.1|	-	1.5e-06	27.7	0.2	3.4e-06	26.6	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|429217459|ref|YP_007175449.1|	-	0.0062	16.3	0.2	0.013	15.3	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-FCS	PF06467.9	gi|429217459|ref|YP_007175449.1|	-	0.17	11.5	0.8	1.6	8.4	0.0	2.3	1	1	1	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
Latrotoxin_C	PF15658.1	gi|429217459|ref|YP_007175449.1|	-	0.21	11.3	1.7	0.45	10.3	1.2	1.5	1	1	0	1	1	1	0	Latrotoxin	C-terminal	domain
Pribosyltran	PF00156.22	gi|429217460|ref|YP_007175450.1|	-	6.8e-19	67.8	0.1	1.1e-18	67.1	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
Ribosomal_S17e	PF00833.13	gi|429217461|ref|YP_007175451.1|	-	1.6e-20	73.0	0.8	1.7e-20	73.0	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	S17
Seadorna_VP7	PF07387.6	gi|429217461|ref|YP_007175451.1|	-	0.029	13.2	0.2	0.033	13.0	0.1	1.1	1	0	0	1	1	1	0	Seadornavirus	VP7
PAH	PF02671.16	gi|429217461|ref|YP_007175451.1|	-	0.039	13.5	0.5	0.078	12.6	0.0	1.7	2	0	0	2	2	2	0	Paired	amphipathic	helix	repeat
tRNA-synt_1e	PF01406.14	gi|429217462|ref|YP_007175452.1|	-	4.3e-127	423.3	2.1	4.3e-127	423.3	1.5	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|429217462|ref|YP_007175452.1|	-	5.7e-19	68.0	3.3	6.4e-12	44.8	0.4	2.4	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|429217462|ref|YP_007175452.1|	-	2.6e-14	52.1	0.2	1.6e-10	39.6	0.0	2.5	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.6	gi|429217462|ref|YP_007175452.1|	-	5.9e-05	23.2	0.1	0.00059	20.0	0.0	2.6	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1f	PF01921.13	gi|429217462|ref|YP_007175452.1|	-	6.7e-05	21.7	0.3	0.0034	16.1	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|429217462|ref|YP_007175452.1|	-	0.0093	14.8	5.8	0.033	13.0	0.1	3.3	2	2	2	4	4	4	1	tRNA	synthetases	class	I	(R)
tRNA-synt_1c	PF00749.16	gi|429217462|ref|YP_007175452.1|	-	0.016	13.8	4.8	0.16	10.6	0.3	3.5	2	2	1	3	3	3	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
FTO_CTD	PF12934.2	gi|429217462|ref|YP_007175452.1|	-	0.026	14.1	0.2	0.057	13.0	0.2	1.5	1	0	0	1	1	1	0	FTO	C-terminal	domain
tRNA-synt_1b	PF00579.20	gi|429217462|ref|YP_007175452.1|	-	0.029	13.5	0.9	0.063	12.3	0.3	1.7	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(W	and	Y)
DUF1843	PF08898.5	gi|429217462|ref|YP_007175452.1|	-	0.56	10.2	4.0	0.14	12.2	0.3	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1843)
UbiA	PF01040.13	gi|429217463|ref|YP_007175453.1|	-	6.4e-34	117.3	23.8	8.8e-34	116.8	16.5	1.3	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DAO	PF01266.19	gi|429217464|ref|YP_007175454.1|	-	3.6e-08	32.7	0.0	0.00023	20.1	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|429217464|ref|YP_007175454.1|	-	9.5e-05	22.3	0.1	0.00022	21.1	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|429217464|ref|YP_007175454.1|	-	9.8e-05	21.5	0.0	0.0054	15.8	0.0	2.2	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|429217464|ref|YP_007175454.1|	-	0.00034	19.8	0.0	0.0038	16.3	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|429217464|ref|YP_007175454.1|	-	0.0011	17.7	0.0	0.21	10.1	0.0	2.5	2	1	0	2	2	2	2	Tryptophan	halogenase
Thi4	PF01946.12	gi|429217464|ref|YP_007175454.1|	-	0.0017	17.4	0.0	0.0068	15.5	0.0	1.9	2	0	0	2	2	2	1	Thi4	family
FAD_binding_2	PF00890.19	gi|429217464|ref|YP_007175454.1|	-	0.007	15.2	0.0	0.18	10.5	0.1	2.2	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|429217464|ref|YP_007175454.1|	-	0.016	15.5	0.1	1.6	9.1	0.0	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|429217464|ref|YP_007175454.1|	-	0.017	14.1	0.1	0.058	12.3	0.1	1.8	2	0	0	2	2	2	0	Lycopene	cyclase	protein
NAD_binding_8	PF13450.1	gi|429217464|ref|YP_007175454.1|	-	0.063	13.3	0.1	0.15	12.1	0.1	1.6	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|429217464|ref|YP_007175454.1|	-	0.085	11.3	0.3	7.4	4.9	0.0	2.9	3	0	0	3	3	3	0	HI0933-like	protein
GIDA	PF01134.17	gi|429217464|ref|YP_007175454.1|	-	0.12	11.2	0.0	0.16	10.7	0.0	1.3	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
ThiF	PF00899.16	gi|429217464|ref|YP_007175454.1|	-	0.14	11.9	0.1	0.33	10.7	0.1	1.6	1	0	0	1	1	1	0	ThiF	family
DUF2042	PF09743.4	gi|429217465|ref|YP_007175455.1|	-	0.024	13.9	2.1	0.027	13.8	1.4	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2042)
HSP20	PF00011.16	gi|429217466|ref|YP_007175456.1|	-	8.5e-16	57.6	6.1	2.7e-15	56.0	2.2	2.4	2	1	0	2	2	2	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|429217466|ref|YP_007175456.1|	-	9.4e-07	29.2	1.5	1.7e-06	28.4	1.0	1.4	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.6	gi|429217466|ref|YP_007175456.1|	-	2.7e-06	27.1	0.1	2.7e-06	27.1	0.1	1.2	1	0	0	1	1	1	1	GvpH
PIH1	PF08190.7	gi|429217466|ref|YP_007175456.1|	-	0.0051	16.3	0.0	0.0068	15.8	0.0	1.2	1	0	0	1	1	1	1	pre-RNA	processing	PIH1/Nop17
RHH_1	PF01402.16	gi|429217468|ref|YP_007175458.1|	-	0.0031	17.3	0.0	0.0057	16.5	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
Sigma70_ner	PF04546.8	gi|429217468|ref|YP_007175458.1|	-	0.11	12.1	0.2	0.17	11.5	0.1	1.3	1	1	0	1	1	1	0	Sigma-70,	non-essential	region
Cation_efflux	PF01545.16	gi|429217469|ref|YP_007175459.1|	-	0.003	16.6	0.9	0.004	16.2	0.6	1.1	1	0	0	1	1	1	1	Cation	efflux	family
PHZA_PHZB	PF03284.8	gi|429217469|ref|YP_007175459.1|	-	0.12	11.4	0.1	0.19	10.8	0.0	1.3	1	0	0	1	1	1	0	Phenazine	biosynthesis	protein	A/B
DUF1212	PF06738.7	gi|429217469|ref|YP_007175459.1|	-	0.63	9.4	2.9	0.97	8.8	2.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
Chordopox_L2	PF05803.7	gi|429217469|ref|YP_007175459.1|	-	9.9	5.8	12.5	1.9	8.1	5.7	2.0	2	1	0	2	2	2	0	Chordopoxvirus	L2	protein
Ribosomal_L11_N	PF03946.9	gi|429217470|ref|YP_007175460.1|	-	2.3e-23	81.3	3.3	3.9e-23	80.6	0.9	2.3	2	1	1	3	3	3	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|429217470|ref|YP_007175460.1|	-	1.5e-18	66.7	0.2	1.5e-18	66.7	0.1	1.8	2	1	0	2	2	2	1	Ribosomal	protein	L11,	RNA	binding	domain
CBS	PF00571.23	gi|429217472|ref|YP_007175462.1|	-	3.1e-27	94.0	1.7	2e-13	49.8	0.1	2.0	2	0	0	2	2	2	2	CBS	domain
AFOR_N	PF02730.10	gi|429217473|ref|YP_007175463.1|	-	2.6e-33	115.1	0.2	3.6e-33	114.6	0.1	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
AFOR_C	PF01314.13	gi|429217473|ref|YP_007175463.1|	-	4.5e-14	51.9	0.0	7.6e-14	51.1	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
tRNA-synt_2c	PF01411.14	gi|429217474|ref|YP_007175464.1|	-	1.4e-111	373.4	0.0	2.9e-111	372.4	0.0	1.5	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|429217474|ref|YP_007175464.1|	-	7.2e-14	51.4	0.3	1.7e-13	50.2	0.2	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|429217474|ref|YP_007175464.1|	-	0.0001	21.9	0.3	0.00026	20.6	0.2	1.7	1	0	0	1	1	1	1	DHHA1	domain
DUF964	PF06133.6	gi|429217474|ref|YP_007175464.1|	-	0.012	15.5	0.4	0.12	12.3	0.3	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF964)
Ribosomal_60s	PF00428.14	gi|429217475|ref|YP_007175465.1|	-	6.5e-15	55.2	11.0	8.1e-15	54.9	7.6	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
Senescence_reg	PF04520.8	gi|429217475|ref|YP_007175465.1|	-	0.049	14.1	0.9	0.053	14.0	0.7	1.1	1	0	0	1	1	1	0	Senescence	regulator
DUF3474	PF11960.3	gi|429217475|ref|YP_007175465.1|	-	0.085	12.8	0.2	0.1	12.5	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3474)
TAF	PF02969.12	gi|429217475|ref|YP_007175465.1|	-	0.13	12.2	0.4	0.2	11.6	0.3	1.2	1	0	0	1	1	1	0	TATA	box	binding	protein	associated	factor	(TAF)
CBS	PF00571.23	gi|429217476|ref|YP_007175466.1|	-	3.1e-31	106.9	1.2	1.3e-16	60.0	0.1	2.0	2	0	0	2	2	2	2	CBS	domain
Ribosomal_L1	PF00687.16	gi|429217477|ref|YP_007175467.1|	-	1.6e-38	132.2	0.6	1.9e-38	132.0	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L10	PF00466.15	gi|429217478|ref|YP_007175468.1|	-	1.7e-16	59.9	1.4	4.1e-16	58.7	1.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
DUF4346	PF14251.1	gi|429217478|ref|YP_007175468.1|	-	0.0052	16.5	0.1	0.0097	15.6	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
Ribosomal_60s	PF00428.14	gi|429217478|ref|YP_007175468.1|	-	0.015	15.6	11.5	0.085	13.2	7.8	2.4	2	0	0	2	2	2	0	60s	Acidic	ribosomal	protein
Band_7	PF01145.20	gi|429217478|ref|YP_007175468.1|	-	0.24	11.2	3.1	0.78	9.6	2.2	1.8	1	1	0	1	1	1	0	SPFH	domain	/	Band	7	family
CcdA	PF07362.7	gi|429217478|ref|YP_007175468.1|	-	0.29	11.0	2.7	0.7	9.8	1.3	2.0	2	0	0	2	2	2	0	Post-segregation	antitoxin	CcdA
DUF809	PF05663.6	gi|429217478|ref|YP_007175468.1|	-	2.2	8.2	7.2	32	4.4	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF809)
DUF4446	PF14584.1	gi|429217479|ref|YP_007175469.1|	-	0.017	14.9	0.0	0.022	14.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
COMP	PF11598.3	gi|429217479|ref|YP_007175469.1|	-	0.032	14.2	0.1	0.079	13.0	0.1	1.7	1	0	0	1	1	1	0	Cartilage	oligomeric	matrix	protein
Erp_C	PF06780.6	gi|429217479|ref|YP_007175469.1|	-	0.054	13.3	0.9	0.073	12.9	0.6	1.2	1	0	0	1	1	1	0	Erp	protein	C-terminus
RPA_interact_M	PF14767.1	gi|429217479|ref|YP_007175469.1|	-	0.085	13.6	1.0	0.14	12.9	0.7	1.3	1	0	0	1	1	1	0	Replication	protein	A	interacting	middle
LicD	PF04991.8	gi|429217479|ref|YP_007175469.1|	-	0.13	12.3	2.1	0.26	11.3	0.4	1.9	2	0	0	2	2	2	0	LicD	family
DUF1374	PF07118.6	gi|429217479|ref|YP_007175469.1|	-	0.26	11.3	6.2	0.083	13.0	1.6	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1374)
PRESAN	PF09687.5	gi|429217479|ref|YP_007175469.1|	-	0.51	10.4	9.4	0.6	10.1	0.5	2.2	1	1	0	2	2	2	0	Plasmodium	RESA	N-terminal
FCD	PF07729.7	gi|429217480|ref|YP_007175470.1|	-	1.6e-28	99.5	2.2	2.2e-28	99.1	1.5	1.1	1	0	0	1	1	1	1	FCD	domain
GntR	PF00392.16	gi|429217480|ref|YP_007175470.1|	-	1.2e-16	59.8	0.0	2.6e-16	58.8	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_27	PF13463.1	gi|429217480|ref|YP_007175470.1|	-	0.00035	20.8	0.2	0.0015	18.7	0.0	2.2	2	1	1	3	3	2	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|429217480|ref|YP_007175470.1|	-	0.00036	19.8	0.0	0.0011	18.2	0.0	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|429217480|ref|YP_007175470.1|	-	0.0023	17.8	0.1	0.0093	15.8	0.0	2.0	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.14	gi|429217480|ref|YP_007175470.1|	-	0.0028	17.3	0.2	0.0097	15.5	0.0	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|429217480|ref|YP_007175470.1|	-	0.0057	16.3	0.2	0.047	13.4	0.0	2.3	1	1	1	2	2	2	1	MarR	family
DUF607	PF04678.8	gi|429217480|ref|YP_007175470.1|	-	0.0065	16.4	0.5	0.01	15.7	0.1	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF607
DrrA_P4M	PF14860.1	gi|429217480|ref|YP_007175470.1|	-	0.0065	16.2	3.3	1.5	8.5	0.2	2.6	2	1	0	2	2	2	2	DrrA	phosphatidylinositol	4-phosphate	binding	domain
HTH_11	PF08279.7	gi|429217480|ref|YP_007175470.1|	-	0.0074	15.9	0.0	0.023	14.3	0.0	1.9	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.7	gi|429217480|ref|YP_007175470.1|	-	0.0082	15.6	0.0	0.022	14.2	0.0	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
DUF1128	PF06569.6	gi|429217480|ref|YP_007175470.1|	-	0.012	15.3	0.1	0.044	13.4	0.1	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1128)
HTH_Crp_2	PF13545.1	gi|429217480|ref|YP_007175470.1|	-	0.03	14.1	0.0	0.082	12.7	0.0	1.8	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
EAP30	PF04157.11	gi|429217480|ref|YP_007175470.1|	-	0.043	12.9	0.0	1.1	8.3	0.0	2.2	2	0	0	2	2	2	0	EAP30/Vps36	family
Rrf2	PF02082.15	gi|429217480|ref|YP_007175470.1|	-	0.047	13.8	0.0	0.12	12.4	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
DUF2203	PF09969.4	gi|429217480|ref|YP_007175470.1|	-	0.047	13.8	1.1	0.97	9.6	0.0	2.7	1	1	2	3	3	3	0	Uncharacterized	conserved	protein	(DUF2203)
DUF1957	PF09210.6	gi|429217480|ref|YP_007175470.1|	-	0.19	11.8	3.1	1	9.4	0.1	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1957)
Pyr_redox_2	PF07992.9	gi|429217481|ref|YP_007175471.1|	-	2e-30	106.2	0.0	5.1e-30	104.8	0.0	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429217481|ref|YP_007175471.1|	-	8.9e-15	54.8	3.2	8.2e-13	48.5	0.2	2.8	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|429217481|ref|YP_007175471.1|	-	2.7e-13	50.4	0.5	7.2e-10	39.2	0.0	3.1	1	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|429217481|ref|YP_007175471.1|	-	5.5e-10	38.6	2.1	0.0049	15.7	0.2	3.5	2	1	2	4	4	4	3	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|429217481|ref|YP_007175471.1|	-	7.4e-06	25.2	0.1	0.027	13.5	0.1	2.3	2	0	0	2	2	2	2	FAD	binding	domain
GIDA	PF01134.17	gi|429217481|ref|YP_007175471.1|	-	7.8e-06	24.9	9.2	0.034	13.0	0.1	3.9	3	1	1	4	4	4	3	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|429217481|ref|YP_007175471.1|	-	9.9e-06	24.6	0.2	0.11	11.4	0.2	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|429217481|ref|YP_007175471.1|	-	1.3e-05	23.9	1.5	0.063	11.7	0.1	3.4	3	1	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|429217481|ref|YP_007175471.1|	-	2.5e-05	23.5	2.0	0.0011	18.1	0.0	2.5	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|429217481|ref|YP_007175471.1|	-	0.00044	20.4	0.1	0.37	11.0	0.0	2.3	2	0	0	2	2	2	2	Putative	NAD(P)-binding
Thi4	PF01946.12	gi|429217481|ref|YP_007175471.1|	-	0.00048	19.3	0.4	0.014	14.4	0.1	2.4	2	0	0	2	2	2	1	Thi4	family
K_oxygenase	PF13434.1	gi|429217481|ref|YP_007175471.1|	-	0.00067	18.6	0.1	1	8.1	0.0	3.0	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.9	gi|429217481|ref|YP_007175471.1|	-	0.004	15.8	0.6	0.09	11.3	0.1	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
NAD_binding_8	PF13450.1	gi|429217481|ref|YP_007175471.1|	-	0.041	13.9	0.7	0.23	11.5	0.0	2.4	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|429217481|ref|YP_007175471.1|	-	0.16	10.8	2.1	1.3	7.8	0.1	2.6	3	1	1	4	4	4	0	Lycopene	cyclase	protein
Wyosine_form	PF08608.7	gi|429217482|ref|YP_007175472.1|	-	1.3e-22	79.6	0.2	3e-22	78.4	0.0	1.8	2	0	0	2	2	2	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|429217482|ref|YP_007175472.1|	-	2.8e-18	66.6	0.1	1.1e-17	64.6	0.0	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
DUF2296	PF10058.4	gi|429217485|ref|YP_007175475.1|	-	0.0011	18.6	3.5	0.0011	18.6	2.4	2.2	1	1	2	3	3	3	2	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-H2C2_2	PF13465.1	gi|429217485|ref|YP_007175475.1|	-	0.0017	18.5	3.7	2.6	8.4	0.1	3.2	3	0	0	3	3	3	0	Zinc-finger	double	domain
Zn-ribbon_8	PF09723.5	gi|429217485|ref|YP_007175475.1|	-	0.0023	17.8	4.8	0.037	13.9	2.1	2.9	2	1	1	3	3	3	2	Zinc	ribbon	domain
DZR	PF12773.2	gi|429217485|ref|YP_007175475.1|	-	0.0031	17.2	5.4	0.65	9.8	0.4	2.2	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-CSL	PF05207.8	gi|429217485|ref|YP_007175475.1|	-	0.0098	15.3	3.9	0.026	14.0	0.3	2.1	1	1	1	2	2	2	1	CSL	zinc	finger
Nudix_N_2	PF14803.1	gi|429217485|ref|YP_007175475.1|	-	0.01	15.5	4.2	0.013	15.1	0.9	2.2	2	0	0	2	2	2	1	Nudix	N-terminal
tRNA-synt_1f	PF01921.13	gi|429217485|ref|YP_007175475.1|	-	0.011	14.4	0.1	0.014	14.0	0.1	1.2	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
zf-Di19	PF05605.7	gi|429217485|ref|YP_007175475.1|	-	0.012	15.7	6.3	0.11	12.6	0.0	2.8	2	1	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-LITAF-like	PF10601.4	gi|429217485|ref|YP_007175475.1|	-	0.013	15.3	5.8	0.13	12.1	0.2	2.9	2	1	1	3	3	3	0	LITAF-like	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429217485|ref|YP_007175475.1|	-	0.014	14.8	6.2	0.29	10.6	0.0	3.1	2	1	1	3	3	3	0	zinc-ribbon	domain
Sgf11	PF08209.6	gi|429217485|ref|YP_007175475.1|	-	0.015	14.5	4.7	3.4	7.0	0.1	3.2	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-DNA_Pol	PF08996.5	gi|429217485|ref|YP_007175475.1|	-	0.017	14.5	1.3	0.65	9.3	0.1	2.0	1	1	1	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
zf-ribbon_3	PF13248.1	gi|429217485|ref|YP_007175475.1|	-	0.027	13.6	8.3	0.39	9.9	0.1	3.3	3	1	0	3	3	3	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|429217485|ref|YP_007175475.1|	-	0.053	13.7	6.3	1.6	9.0	2.7	2.2	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-ISL3	PF14690.1	gi|429217485|ref|YP_007175475.1|	-	0.063	13.3	7.7	0.66	10.0	0.1	3.1	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc-ribbons_6	PF07191.7	gi|429217485|ref|YP_007175475.1|	-	0.064	13.0	4.6	0.46	10.2	3.2	2.3	1	1	0	1	1	1	0	zinc-ribbons
TF_Zn_Ribbon	PF08271.7	gi|429217485|ref|YP_007175475.1|	-	0.064	12.5	6.0	0.17	11.2	2.0	2.5	2	1	0	2	2	2	0	TFIIB	zinc-binding
Elf1	PF05129.8	gi|429217485|ref|YP_007175475.1|	-	0.065	12.9	4.6	0.34	10.6	0.8	2.5	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
Ribosomal_S27e	PF01667.12	gi|429217485|ref|YP_007175475.1|	-	0.077	12.5	4.1	17	5.0	0.0	3.0	2	1	0	3	3	3	0	Ribosomal	protein	S27
zf-C4_Topoisom	PF01396.14	gi|429217485|ref|YP_007175475.1|	-	0.079	12.4	2.4	4.2	6.9	0.0	2.5	3	0	0	3	3	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
FYVE	PF01363.16	gi|429217485|ref|YP_007175475.1|	-	0.084	12.7	8.7	0.059	13.2	1.1	2.1	1	1	0	2	2	2	0	FYVE	zinc	finger
DUF329	PF03884.9	gi|429217485|ref|YP_007175475.1|	-	0.09	12.3	3.6	20	4.8	0.2	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF329)
HypA	PF01155.14	gi|429217485|ref|YP_007175475.1|	-	0.11	12.1	4.3	1.4	8.6	3.0	2.0	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Lar_restr_allev	PF14354.1	gi|429217485|ref|YP_007175475.1|	-	0.12	12.7	6.2	0.14	12.4	2.2	2.1	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
TerY-C	PF15616.1	gi|429217485|ref|YP_007175475.1|	-	0.13	12.1	5.6	2.3	8.1	3.9	2.2	1	1	0	1	1	1	0	TerY-C	metal	binding	domain
Zn_Tnp_IS1	PF03811.8	gi|429217485|ref|YP_007175475.1|	-	0.16	11.4	6.3	6.6	6.3	0.1	3.4	3	1	0	3	3	3	0	InsA	N-terminal	domain
zf-MYND	PF01753.13	gi|429217485|ref|YP_007175475.1|	-	0.16	11.8	3.8	0.78	9.6	2.6	1.9	1	1	0	1	1	1	0	MYND	finger
DUF1272	PF06906.6	gi|429217485|ref|YP_007175475.1|	-	0.16	11.8	5.2	6.8	6.6	3.6	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-C2H2	PF00096.21	gi|429217485|ref|YP_007175475.1|	-	0.18	12.2	6.6	16	6.0	0.3	3.3	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
zf-CHY	PF05495.7	gi|429217485|ref|YP_007175475.1|	-	0.2	11.8	5.0	0.68	10.1	3.5	1.7	1	1	0	1	1	1	0	CHY	zinc	finger
CpXC	PF14353.1	gi|429217485|ref|YP_007175475.1|	-	0.2	11.5	4.0	2	8.3	0.1	2.8	2	1	1	3	3	3	0	CpXC	protein
UPF0547	PF10571.4	gi|429217485|ref|YP_007175475.1|	-	0.21	11.3	7.3	9	6.0	0.1	3.1	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
PhnA_Zn_Ribbon	PF08274.7	gi|429217485|ref|YP_007175475.1|	-	0.22	11.3	2.7	6.4	6.6	0.3	2.3	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-C4_ClpX	PF06689.8	gi|429217485|ref|YP_007175475.1|	-	0.25	10.9	2.8	0.9	9.1	0.0	2.6	2	1	0	2	2	2	0	ClpX	C4-type	zinc	finger
zf-AN1	PF01428.11	gi|429217485|ref|YP_007175475.1|	-	0.25	11.2	4.9	64	3.5	0.0	3.0	2	1	1	3	3	3	0	AN1-like	Zinc	finger
zf-IS66	PF13005.2	gi|429217485|ref|YP_007175475.1|	-	0.28	11.1	9.3	1.1	9.3	0.0	2.8	3	0	0	3	3	2	0	zinc-finger	binding	domain	of	transposase	IS66
RNHCP	PF12647.2	gi|429217485|ref|YP_007175475.1|	-	0.3	10.9	6.2	0.87	9.4	1.7	2.2	1	1	2	3	3	3	0	RNHCP	domain
Rubredoxin	PF00301.15	gi|429217485|ref|YP_007175475.1|	-	0.34	10.8	6.3	6.1	6.8	1.6	2.8	2	1	0	2	2	2	0	Rubredoxin
Auto_anti-p27	PF06677.7	gi|429217485|ref|YP_007175475.1|	-	0.38	10.5	4.8	1.9	8.3	0.1	3.0	3	0	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
SprT-like	PF10263.4	gi|429217485|ref|YP_007175475.1|	-	0.46	10.1	3.7	0.81	9.3	2.6	1.5	1	1	0	1	1	1	0	SprT-like	family
FANCL_C	PF11793.3	gi|429217485|ref|YP_007175475.1|	-	0.49	10.4	5.8	6.7	6.7	0.1	2.9	2	1	0	2	2	2	0	FANCL	C-terminal	domain
Zn_Tnp_IS91	PF14319.1	gi|429217485|ref|YP_007175475.1|	-	0.54	9.7	3.5	0.79	9.2	1.2	1.9	2	0	0	2	2	2	0	Transposase	zinc-binding	domain
Ribosomal_L37e	PF01907.14	gi|429217485|ref|YP_007175475.1|	-	0.58	10.0	0.1	0.58	10.0	0.1	2.4	3	0	0	3	3	3	0	Ribosomal	protein	L37e
DUF35_N	PF12172.3	gi|429217485|ref|YP_007175475.1|	-	0.59	10.1	8.7	7.6	6.5	0.1	2.8	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
E6	PF00518.12	gi|429217485|ref|YP_007175475.1|	-	0.59	10.4	4.0	1.4	9.3	0.0	2.4	1	1	1	2	2	2	0	Early	Protein	(E6)
Cys_rich_CPXG	PF14255.1	gi|429217485|ref|YP_007175475.1|	-	0.62	9.9	7.6	0.47	10.3	0.3	2.8	2	1	1	3	3	3	0	Cysteine-rich	CPXCG
zf-C3HC4_3	PF13920.1	gi|429217485|ref|YP_007175475.1|	-	0.62	9.7	9.1	20	4.9	6.3	2.7	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Acetone_carb_G	PF08882.6	gi|429217485|ref|YP_007175475.1|	-	0.67	9.9	3.1	18	5.4	0.3	2.3	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
zf-TFIIB	PF13453.1	gi|429217485|ref|YP_007175475.1|	-	0.76	9.0	4.8	7.5	5.8	0.5	2.4	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
Zn_Tnp_IS1595	PF12760.2	gi|429217485|ref|YP_007175475.1|	-	0.82	9.5	11.3	0.28	11.0	4.0	2.5	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
DiS_P_DiS	PF06750.8	gi|429217485|ref|YP_007175475.1|	-	1.1	9.1	5.7	3.2	7.6	1.0	2.7	1	1	1	2	2	2	0	Bacterial	Peptidase	A24	N-terminal	domain
C1_4	PF07975.7	gi|429217485|ref|YP_007175475.1|	-	1.1	9.2	7.0	1e+02	3.0	5.4	2.5	1	1	1	2	2	2	0	TFIIH	C1-like	domain
PyrI_C	PF02748.10	gi|429217485|ref|YP_007175475.1|	-	1.1	8.6	5.3	1.8	8.0	0.3	2.6	2	1	1	3	3	3	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-B_box	PF00643.19	gi|429217485|ref|YP_007175475.1|	-	1.5	8.7	6.3	2.5	8.0	2.4	2.5	2	1	0	2	2	2	0	B-box	zinc	finger
zf-Mss51	PF13824.1	gi|429217485|ref|YP_007175475.1|	-	1.5	8.6	7.8	34	4.3	5.5	2.4	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C2H2_4	PF13894.1	gi|429217485|ref|YP_007175475.1|	-	1.6	9.2	14.5	4.1	7.9	3.0	3.3	2	2	1	3	3	3	0	C2H2-type	zinc	finger
Terminase_GpA	PF05876.7	gi|429217485|ref|YP_007175475.1|	-	1.6	6.9	6.1	10	4.2	4.2	1.9	1	1	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
Desulfoferrod_N	PF06397.7	gi|429217485|ref|YP_007175475.1|	-	2.1	7.8	8.1	8.8	5.8	0.0	3.4	3	1	1	4	4	4	0	Desulfoferrodoxin,	N-terminal	domain
RRN7	PF11781.3	gi|429217485|ref|YP_007175475.1|	-	2.1	7.9	5.7	35	3.9	0.0	3.2	3	1	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Tnp_zf-ribbon_2	PF13842.1	gi|429217485|ref|YP_007175475.1|	-	2.3	8.6	8.0	9.9	6.6	4.2	2.3	1	1	1	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
E7	PF00527.13	gi|429217485|ref|YP_007175475.1|	-	2.4	8.3	6.4	2.9	8.0	0.2	2.8	1	1	2	3	3	3	0	E7	protein,	Early	protein
zf-RING_2	PF13639.1	gi|429217485|ref|YP_007175475.1|	-	2.6	7.9	5.3	5.6	6.8	3.7	1.7	1	1	0	1	1	1	0	Ring	finger	domain
zf-Sec23_Sec24	PF04810.10	gi|429217485|ref|YP_007175475.1|	-	3.1	7.4	10.5	1.7	8.3	1.4	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
zinc_ribbon_5	PF13719.1	gi|429217485|ref|YP_007175475.1|	-	3.1	7.4	7.9	56	3.4	0.1	3.0	2	1	1	3	3	3	0	zinc-ribbon	domain
PHD	PF00628.24	gi|429217485|ref|YP_007175475.1|	-	3.1	7.5	7.5	5.8	6.6	1.3	2.7	2	1	0	2	2	2	0	PHD-finger
zf-UBR	PF02207.15	gi|429217485|ref|YP_007175475.1|	-	3.7	7.3	7.8	1.1	9.0	1.9	2.4	1	1	1	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
ADK_lid	PF05191.9	gi|429217485|ref|YP_007175475.1|	-	4.9	6.8	7.0	7.9	6.2	2.3	2.6	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
C1_2	PF03107.11	gi|429217485|ref|YP_007175475.1|	-	6	7.0	10.6	28	4.9	0.1	3.1	2	1	1	3	3	3	0	C1	domain
OrfB_Zn_ribbon	PF07282.6	gi|429217485|ref|YP_007175475.1|	-	6.3	6.5	6.2	84	2.9	4.3	2.2	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-CCHC_4	PF14392.1	gi|429217485|ref|YP_007175475.1|	-	6.4	6.5	7.2	11	5.8	0.1	3.0	3	0	0	3	3	3	0	Zinc	knuckle
zf-HIT	PF04438.11	gi|429217485|ref|YP_007175475.1|	-	6.6	6.4	15.1	7.9	6.2	1.5	3.1	2	1	1	3	3	3	0	HIT	zinc	finger
zf-RING_5	PF14634.1	gi|429217485|ref|YP_007175475.1|	-	7.9	6.2	9.2	1.9e+02	1.8	6.4	2.7	1	1	1	2	2	2	0	zinc-RING	finger	domain
zinc_ribbon_4	PF13717.1	gi|429217485|ref|YP_007175475.1|	-	8.5	6.1	8.6	54	3.6	0.1	2.9	2	1	0	2	2	2	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|429217485|ref|YP_007175475.1|	-	9.3	5.8	11.2	11	5.6	0.9	3.3	3	1	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
PNP_UDP_1	PF01048.15	gi|429217487|ref|YP_007175477.1|	-	1.3e-38	132.2	0.0	1.5e-38	132.0	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Lactamase_B_2	PF12706.2	gi|429217488|ref|YP_007175478.1|	-	9.3e-12	44.8	0.3	3.8e-09	36.3	0.1	2.2	2	0	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|429217488|ref|YP_007175478.1|	-	5.8e-06	26.0	0.0	9.6e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DRMBL	PF07522.9	gi|429217488|ref|YP_007175478.1|	-	5.1e-05	23.2	0.0	0.00012	22.1	0.0	1.6	1	0	0	1	1	1	1	DNA	repair	metallo-beta-lactamase
RMMBL	PF07521.7	gi|429217488|ref|YP_007175478.1|	-	0.00081	19.1	0.0	0.0018	18.0	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
PIG-F	PF06699.6	gi|429217489|ref|YP_007175479.1|	-	0.063	13.2	4.7	0.097	12.5	3.2	1.4	1	0	0	1	1	1	0	GPI	biosynthesis	protein	family	Pig-F
DUF3816	PF12822.2	gi|429217489|ref|YP_007175479.1|	-	0.42	10.4	17.6	0.65	9.8	12.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
DUF1129	PF06570.6	gi|429217489|ref|YP_007175479.1|	-	6.9	5.9	11.2	8.5	5.6	7.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
FdhE	PF04216.7	gi|429217490|ref|YP_007175480.1|	-	5.9e-16	59.0	0.0	7.4e-16	58.7	0.0	1.1	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
Lar_restr_allev	PF14354.1	gi|429217490|ref|YP_007175480.1|	-	1.7e-06	28.2	5.3	0.0029	17.8	0.8	2.4	1	1	1	2	2	2	2	Restriction	alleviation	protein	Lar
DZR	PF12773.2	gi|429217490|ref|YP_007175480.1|	-	1.7e-06	27.7	5.1	1.9e-05	24.4	2.4	2.2	2	0	0	2	2	2	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|429217490|ref|YP_007175480.1|	-	1.4e-05	24.2	6.5	0.00093	18.4	0.9	3.1	3	0	0	3	3	3	1	TFIIB	zinc-binding
Prim_Zn_Ribbon	PF08273.7	gi|429217490|ref|YP_007175480.1|	-	1.9e-05	24.6	9.9	0.00011	22.1	0.8	2.5	2	1	0	2	2	2	1	Zinc-binding	domain	of	primase-helicase
Elf1	PF05129.8	gi|429217490|ref|YP_007175480.1|	-	9.5e-05	22.0	4.7	0.04	13.5	0.1	2.3	1	1	1	2	2	2	2	Transcription	elongation	factor	Elf1	like
zf-C3HC4_3	PF13920.1	gi|429217490|ref|YP_007175480.1|	-	0.00011	21.8	6.0	0.0003	20.4	2.1	2.1	2	0	0	2	2	2	1	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.14	gi|429217490|ref|YP_007175480.1|	-	0.00052	19.6	6.6	0.011	15.3	2.4	3.1	1	1	1	2	2	2	1	Hydrogenase	expression/synthesis	hypA	family
FYVE	PF01363.16	gi|429217490|ref|YP_007175480.1|	-	0.0014	18.5	3.1	0.0079	16.0	2.1	2.0	1	1	0	1	1	1	1	FYVE	zinc	finger
zf-ribbon_3	PF13248.1	gi|429217490|ref|YP_007175480.1|	-	0.0027	16.8	13.2	0.88	8.8	2.6	3.5	3	1	0	3	3	3	2	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|429217490|ref|YP_007175480.1|	-	0.004	16.6	0.5	0.004	16.6	0.4	3.0	3	1	0	3	3	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
Prok-RING_1	PF14446.1	gi|429217490|ref|YP_007175480.1|	-	0.0098	15.6	5.4	0.053	13.2	0.7	3.0	3	0	0	3	3	3	1	Prokaryotic	RING	finger	family	1
DUF1257	PF06868.6	gi|429217490|ref|YP_007175480.1|	-	0.012	15.5	0.0	1.2	9.0	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1257)
OrfB_Zn_ribbon	PF07282.6	gi|429217490|ref|YP_007175480.1|	-	0.015	14.9	2.0	0.015	14.9	1.4	3.0	2	1	2	4	4	4	0	Putative	transposase	DNA-binding	domain
TerY-C	PF15616.1	gi|429217490|ref|YP_007175480.1|	-	0.02	14.8	6.3	0.019	14.9	2.7	2.2	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|429217490|ref|YP_007175480.1|	-	0.03	14.1	10.8	1	9.2	1.3	3.3	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|429217490|ref|YP_007175480.1|	-	0.048	13.6	8.0	1.5	8.8	0.9	3.4	2	1	2	4	4	4	0	Zinc	ribbon	domain
DUF2387	PF09526.5	gi|429217490|ref|YP_007175480.1|	-	0.053	13.4	4.2	0.17	11.8	0.5	2.4	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
UPF1_Zn_bind	PF09416.5	gi|429217490|ref|YP_007175480.1|	-	0.055	13.0	4.0	0.083	12.4	1.1	2.1	1	1	1	2	2	2	0	RNA	helicase	(UPF2	interacting	domain)
Cys_rich_KTR	PF14205.1	gi|429217490|ref|YP_007175480.1|	-	0.12	11.8	11.3	1.8	8.0	0.6	3.2	2	1	0	2	2	2	0	Cysteine-rich	KTR
zf-RING_3	PF14369.1	gi|429217490|ref|YP_007175480.1|	-	0.14	12.2	8.4	0.13	12.2	0.9	3.0	3	0	0	3	3	3	0	zinc-finger
Cys_rich_CPXG	PF14255.1	gi|429217490|ref|YP_007175480.1|	-	0.18	11.6	7.0	2.1	8.2	0.5	3.1	2	2	0	2	2	2	0	Cysteine-rich	CPXCG
eIF-5_eIF-2B	PF01873.12	gi|429217490|ref|YP_007175480.1|	-	0.19	11.4	0.2	0.19	11.4	0.1	2.4	3	0	0	3	3	3	0	Domain	found	in	IF2B/IF5
HSP33	PF01430.14	gi|429217490|ref|YP_007175480.1|	-	0.26	10.3	1.5	0.35	9.9	0.1	1.9	1	1	1	2	2	2	0	Hsp33	protein
zf-C3HC4_2	PF13923.1	gi|429217490|ref|YP_007175480.1|	-	0.37	10.8	9.8	1.7	8.7	4.7	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-CHY	PF05495.7	gi|429217490|ref|YP_007175480.1|	-	0.43	10.7	8.4	9.1	6.5	5.9	2.4	1	1	1	2	2	2	0	CHY	zinc	finger
Nudix_N_2	PF14803.1	gi|429217490|ref|YP_007175480.1|	-	0.48	10.1	8.6	0.13	11.9	0.5	3.0	3	0	0	3	3	3	0	Nudix	N-terminal
zf-RING_2	PF13639.1	gi|429217490|ref|YP_007175480.1|	-	0.58	10.0	7.9	2.8	7.8	3.5	2.4	2	1	0	2	2	2	0	Ring	finger	domain
NOB1_Zn_bind	PF08772.6	gi|429217490|ref|YP_007175480.1|	-	0.8	9.5	13.4	0.067	13.0	1.1	3.1	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-RING_5	PF14634.1	gi|429217490|ref|YP_007175480.1|	-	1.1	9.0	7.7	5.1	6.9	0.7	3.1	3	0	0	3	3	3	0	zinc-RING	finger	domain
zf-FPG_IleRS	PF06827.9	gi|429217490|ref|YP_007175480.1|	-	1.2	8.8	6.6	4.9	6.8	0.8	3.0	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zf-trcl	PF13451.1	gi|429217490|ref|YP_007175480.1|	-	1.5	8.4	0.0	1.5	8.4	0.0	3.0	4	0	0	4	4	4	0	Probable	zinc-binding	domain
DNA_ligase_ZBD	PF03119.11	gi|429217490|ref|YP_007175480.1|	-	2.1	8.1	6.7	0.8	9.4	0.5	2.5	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-BED	PF02892.10	gi|429217490|ref|YP_007175480.1|	-	3.3	7.5	6.9	12	5.7	0.4	2.7	1	1	1	2	2	2	0	BED	zinc	finger
zinc_ribbon_2	PF13240.1	gi|429217490|ref|YP_007175480.1|	-	3.9	7.0	18.1	1.6	8.3	0.2	4.0	3	1	1	4	4	4	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|429217490|ref|YP_007175480.1|	-	6.6	7.0	11.9	21	5.4	0.0	4.0	2	1	1	3	3	3	0	Recombinase	zinc	beta	ribbon	domain
ETF	PF01012.16	gi|429217491|ref|YP_007175481.1|	-	2.8e-37	127.9	0.0	5.8e-37	126.9	0.0	1.5	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|429217491|ref|YP_007175481.1|	-	1.9e-34	117.1	0.5	3.8e-34	116.1	0.3	1.5	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|429217492|ref|YP_007175482.1|	-	5.6e-30	104.2	0.0	7.8e-30	103.7	0.0	1.2	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Fer4_7	PF12838.2	gi|429217493|ref|YP_007175483.1|	-	1.1e-08	35.2	8.8	0.00017	21.9	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|429217493|ref|YP_007175483.1|	-	2.2e-07	30.3	13.8	0.00063	19.5	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|429217493|ref|YP_007175483.1|	-	1.3e-05	24.9	6.4	1.9e-05	24.4	4.4	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|429217493|ref|YP_007175483.1|	-	2e-05	23.9	3.8	2e-05	23.9	2.7	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217493|ref|YP_007175483.1|	-	2.5e-05	23.9	24.2	0.00046	19.9	10.2	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217493|ref|YP_007175483.1|	-	0.00019	21.1	17.9	0.0097	15.7	2.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|429217493|ref|YP_007175483.1|	-	0.00023	21.4	6.7	0.0036	17.6	0.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|429217493|ref|YP_007175483.1|	-	0.00037	20.4	6.7	0.0015	18.5	0.4	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217493|ref|YP_007175483.1|	-	0.00066	19.8	15.7	0.0016	18.6	10.5	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|429217493|ref|YP_007175483.1|	-	0.023	15.0	3.3	0.023	15.0	2.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|429217493|ref|YP_007175483.1|	-	0.074	13.8	1.4	0.074	13.8	0.9	2.4	2	1	1	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|429217493|ref|YP_007175483.1|	-	0.1	12.4	14.9	1.4	8.8	10.6	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|429217493|ref|YP_007175483.1|	-	1.2	9.8	23.4	0.29	11.8	4.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|429217493|ref|YP_007175483.1|	-	9.4	5.9	11.9	0.53	9.9	2.1	2.1	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
DAO	PF01266.19	gi|429217494|ref|YP_007175484.1|	-	3.7e-14	52.4	5.8	3.4e-07	29.4	0.4	3.1	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|429217494|ref|YP_007175484.1|	-	6.4e-12	45.0	1.0	1.1e-09	37.6	0.0	2.7	2	1	0	2	2	2	1	Thi4	family
NAD_binding_8	PF13450.1	gi|429217494|ref|YP_007175484.1|	-	3.3e-09	36.6	0.1	1e-08	35.0	0.1	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|429217494|ref|YP_007175484.1|	-	3.7e-08	32.8	0.0	6.3e-08	32.1	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|429217494|ref|YP_007175484.1|	-	4.2e-07	29.3	0.2	3.3e-06	26.3	0.1	2.3	3	0	0	3	3	3	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|429217494|ref|YP_007175484.1|	-	8.9e-07	28.9	0.8	9.2e-07	28.9	0.5	1.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|429217494|ref|YP_007175484.1|	-	1.5e-06	26.9	4.9	2.3e-06	26.3	1.7	2.2	2	1	0	2	2	2	1	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|429217494|ref|YP_007175484.1|	-	2.4e-06	26.6	0.9	5e-05	22.3	0.2	2.1	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|429217494|ref|YP_007175484.1|	-	4.1e-06	25.9	0.8	1.3e-05	24.2	0.6	1.8	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|429217494|ref|YP_007175484.1|	-	1.1e-05	24.5	1.5	1.7e-05	23.9	0.1	1.9	2	1	0	2	2	2	1	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|429217494|ref|YP_007175484.1|	-	4.5e-05	22.2	0.2	0.074	11.6	0.1	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox_3	PF13738.1	gi|429217494|ref|YP_007175484.1|	-	9.2e-05	22.5	0.1	0.00018	21.6	0.1	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.13	gi|429217494|ref|YP_007175484.1|	-	0.00012	20.5	0.0	0.26	9.5	0.0	2.2	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
Pyr_redox	PF00070.22	gi|429217494|ref|YP_007175484.1|	-	0.00038	20.7	3.4	0.011	16.1	0.1	3.6	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|429217494|ref|YP_007175484.1|	-	0.02	14.5	0.1	0.05	13.2	0.1	1.7	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|429217494|ref|YP_007175484.1|	-	0.031	13.7	0.0	0.051	13.0	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_9	PF13454.1	gi|429217494|ref|YP_007175484.1|	-	0.037	13.7	0.1	0.11	12.3	0.1	1.8	1	1	0	1	1	1	0	FAD-NAD(P)-binding
Shikimate_DH	PF01488.15	gi|429217494|ref|YP_007175484.1|	-	0.047	13.7	0.0	0.11	12.6	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|429217494|ref|YP_007175484.1|	-	0.075	12.7	0.1	0.19	11.4	0.0	1.6	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ThiF	PF00899.16	gi|429217494|ref|YP_007175484.1|	-	0.079	12.7	0.0	0.25	11.1	0.0	1.8	1	0	0	1	1	1	0	ThiF	family
eIF-5_eIF-2B	PF01873.12	gi|429217495|ref|YP_007175485.1|	-	8.9e-30	102.9	0.0	1.1e-29	102.6	0.0	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
Lar_restr_allev	PF14354.1	gi|429217495|ref|YP_007175485.1|	-	0.0078	16.5	0.1	0.013	15.7	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-TFIIB	PF13453.1	gi|429217495|ref|YP_007175485.1|	-	0.01	15.0	0.9	0.01	15.0	0.6	1.8	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Elf1	PF05129.8	gi|429217495|ref|YP_007175485.1|	-	0.014	15.1	0.3	0.021	14.4	0.2	1.3	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
OrfB_Zn_ribbon	PF07282.6	gi|429217495|ref|YP_007175485.1|	-	0.026	14.1	0.2	0.047	13.3	0.2	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|429217495|ref|YP_007175485.1|	-	0.027	14.2	0.2	0.046	13.5	0.1	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|429217495|ref|YP_007175485.1|	-	0.036	14.0	0.1	2.7	8.0	0.0	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|429217495|ref|YP_007175485.1|	-	0.046	13.4	0.6	0.47	10.1	0.4	2.2	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DUF678	PF05077.7	gi|429217495|ref|YP_007175485.1|	-	0.061	13.3	1.3	8.6	6.4	0.1	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF678)
zf-ribbon_3	PF13248.1	gi|429217495|ref|YP_007175485.1|	-	0.067	12.4	1.3	4.2	6.7	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
HTH_38	PF13936.1	gi|429217495|ref|YP_007175485.1|	-	0.075	12.5	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Ribosomal_S27e	PF01667.12	gi|429217495|ref|YP_007175485.1|	-	0.082	12.4	0.3	0.16	11.5	0.2	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S27
DUF35_N	PF12172.3	gi|429217495|ref|YP_007175485.1|	-	0.14	12.1	2.6	0.87	9.5	0.2	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-FPG_IleRS	PF06827.9	gi|429217495|ref|YP_007175485.1|	-	0.17	11.5	0.5	0.17	11.5	0.4	1.9	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
PhnA_Zn_Ribbon	PF08274.7	gi|429217495|ref|YP_007175485.1|	-	0.25	11.1	1.8	1.4	8.7	1.3	2.0	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
DUF164	PF02591.10	gi|429217495|ref|YP_007175485.1|	-	0.28	11.0	3.4	4.9	7.0	0.0	3.1	3	0	0	3	3	3	0	Putative	zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|429217495|ref|YP_007175485.1|	-	0.29	10.7	1.5	21	4.8	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|429217495|ref|YP_007175485.1|	-	0.3	10.6	4.1	2.7	7.5	2.9	2.1	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF3797	PF12677.2	gi|429217495|ref|YP_007175485.1|	-	0.36	10.5	2.0	0.8	9.3	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
DNA_RNApol_7kD	PF03604.8	gi|429217495|ref|YP_007175485.1|	-	1.2	8.6	3.8	12	5.4	0.1	2.4	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Radical_SAM	PF04055.16	gi|429217496|ref|YP_007175486.1|	-	3.3e-13	50.1	0.9	9.6e-13	48.6	0.1	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|429217496|ref|YP_007175486.1|	-	1.4e-11	44.7	0.1	3.5e-11	43.3	0.0	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|429217496|ref|YP_007175486.1|	-	1.1e-08	35.1	0.1	1.1e-07	31.8	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Acetyltransf_1	PF00583.19	gi|429217497|ref|YP_007175487.1|	-	4.8e-22	77.7	0.0	7e-22	77.2	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|429217497|ref|YP_007175487.1|	-	7e-12	45.3	0.0	3.7e-11	43.0	0.0	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|429217497|ref|YP_007175487.1|	-	1.8e-11	44.2	0.7	5.5e-10	39.3	0.1	2.5	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|429217497|ref|YP_007175487.1|	-	4.1e-10	39.7	0.0	8.8e-10	38.6	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|429217497|ref|YP_007175487.1|	-	2.9e-09	36.8	0.0	3.1e-08	33.5	0.0	2.2	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|429217497|ref|YP_007175487.1|	-	6e-09	35.5	0.0	9.4e-09	34.9	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_10	PF13673.1	gi|429217497|ref|YP_007175487.1|	-	7.6e-09	35.7	0.0	6.3e-08	32.7	0.0	2.1	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|429217497|ref|YP_007175487.1|	-	4.8e-07	30.0	0.1	9.4e-07	29.0	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|429217497|ref|YP_007175487.1|	-	0.023	14.5	0.0	0.043	13.6	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
GNAT_acetyltr_2	PF13718.1	gi|429217497|ref|YP_007175487.1|	-	0.034	13.4	0.0	0.044	13.1	0.0	1.4	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
DinI	PF06183.8	gi|429217497|ref|YP_007175487.1|	-	0.065	13.2	0.3	7.1	6.7	0.0	2.3	2	0	0	2	2	2	0	DinI-like	family
SbcD_C	PF12320.3	gi|429217497|ref|YP_007175487.1|	-	0.16	12.0	0.4	0.68	9.9	0.0	2.2	2	1	1	3	3	3	0	Type	5	capsule	protein	repressor	C-terminal	domain
DFP	PF04127.10	gi|429217498|ref|YP_007175488.1|	-	1.8e-47	161.3	0.1	1.4e-46	158.4	0.1	2.1	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|429217498|ref|YP_007175488.1|	-	6.3e-25	87.3	0.9	6.3e-25	87.3	0.6	2.7	2	2	1	3	3	3	1	Flavoprotein
DUF3479	PF11965.3	gi|429217498|ref|YP_007175488.1|	-	0.21	11.3	1.0	22	4.8	0.0	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3479)
NAD_synthase	PF02540.12	gi|429217499|ref|YP_007175489.1|	-	3.9e-78	261.7	0.1	4.6e-78	261.4	0.1	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|429217499|ref|YP_007175489.1|	-	2.4e-06	26.3	0.0	0.0012	17.4	0.0	2.2	2	0	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|429217499|ref|YP_007175489.1|	-	0.003	17.1	0.0	0.0033	16.9	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
HTH_25	PF13413.1	gi|429217499|ref|YP_007175489.1|	-	0.0068	16.0	0.0	2.3	7.8	0.0	2.6	2	0	0	2	2	2	2	Helix-turn-helix	domain
QueC	PF06508.8	gi|429217499|ref|YP_007175489.1|	-	0.0069	15.6	0.0	0.041	13.1	0.0	2.0	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
HTH_23	PF13384.1	gi|429217499|ref|YP_007175489.1|	-	0.027	14.1	0.0	1.2	8.8	0.0	3.1	2	1	1	3	3	3	0	Homeodomain-like	domain
ATP_bind_3	PF01171.15	gi|429217499|ref|YP_007175489.1|	-	0.031	13.7	0.2	0.25	10.8	0.0	2.5	3	0	0	3	3	3	0	PP-loop	family
Death	PF00531.17	gi|429217499|ref|YP_007175489.1|	-	0.074	12.8	0.0	5.2	6.9	0.0	2.5	2	0	0	2	2	2	0	Death	domain
HTH_3	PF01381.17	gi|429217499|ref|YP_007175489.1|	-	0.11	12.3	0.1	6	6.7	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix
ThiI	PF02568.9	gi|429217499|ref|YP_007175489.1|	-	0.12	11.8	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
Pox_TAA1	PF03295.9	gi|429217500|ref|YP_007175490.1|	-	0.0043	16.6	0.2	0.0097	15.5	0.2	1.6	1	0	0	1	1	1	1	Poxvirus	trans-activator	protein	A1	C-terminal
DUF3801	PF12687.2	gi|429217500|ref|YP_007175490.1|	-	0.011	15.3	7.5	0.19	11.2	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3801)
ABC_tran	PF00005.22	gi|429217501|ref|YP_007175491.1|	-	1.3e-29	103.2	0.0	2e-29	102.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217501|ref|YP_007175491.1|	-	8.8e-17	61.9	1.0	2.3e-10	40.9	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|429217501|ref|YP_007175491.1|	-	7.7e-07	28.5	0.5	0.0045	16.0	0.4	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|429217501|ref|YP_007175491.1|	-	2.1e-05	24.9	0.7	5.7e-05	23.5	0.5	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|429217501|ref|YP_007175491.1|	-	0.00015	20.3	0.1	0.037	12.4	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|429217501|ref|YP_007175491.1|	-	0.00036	19.8	0.1	0.5	9.5	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|429217501|ref|YP_007175491.1|	-	0.0016	17.9	0.1	1.1	8.6	0.0	2.1	1	1	0	2	2	2	2	AAA-like	domain
DUF258	PF03193.11	gi|429217501|ref|YP_007175491.1|	-	0.0019	17.4	0.0	0.0037	16.4	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|429217501|ref|YP_007175491.1|	-	0.0051	16.3	0.1	0.012	15.1	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|429217501|ref|YP_007175491.1|	-	0.0057	16.5	0.0	0.75	9.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|429217501|ref|YP_007175491.1|	-	0.014	16.2	0.0	0.025	15.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|429217501|ref|YP_007175491.1|	-	0.025	14.2	0.2	0.048	13.3	0.2	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SRP54	PF00448.17	gi|429217501|ref|YP_007175491.1|	-	0.027	13.9	0.0	0.056	12.8	0.0	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_25	PF13481.1	gi|429217501|ref|YP_007175491.1|	-	0.038	13.3	0.0	0.21	10.9	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
KdpD	PF02702.12	gi|429217501|ref|YP_007175491.1|	-	0.049	12.7	0.0	0.072	12.2	0.0	1.4	1	0	0	1	1	1	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
MutS_V	PF00488.16	gi|429217501|ref|YP_007175491.1|	-	0.057	12.8	0.1	1.1	8.6	0.0	2.0	2	0	0	2	2	2	0	MutS	domain	V
Zeta_toxin	PF06414.7	gi|429217501|ref|YP_007175491.1|	-	0.068	12.2	0.0	0.1	11.6	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
MobB	PF03205.9	gi|429217501|ref|YP_007175491.1|	-	0.069	12.8	0.0	0.22	11.2	0.0	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
KaiC	PF06745.8	gi|429217501|ref|YP_007175491.1|	-	0.076	12.1	0.2	4.8	6.2	0.0	2.2	2	0	0	2	2	2	0	KaiC
AAA_30	PF13604.1	gi|429217501|ref|YP_007175491.1|	-	0.083	12.4	0.0	0.27	10.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|429217501|ref|YP_007175491.1|	-	0.09	11.6	0.0	0.17	10.7	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|429217501|ref|YP_007175491.1|	-	0.11	12.5	0.2	0.66	10.1	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane_2	PF12679.2	gi|429217502|ref|YP_007175492.1|	-	8.5e-27	93.7	12.7	1.3e-26	93.0	8.8	1.2	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|429217502|ref|YP_007175492.1|	-	4.6e-20	71.9	36.7	5.4e-20	71.7	25.5	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|429217502|ref|YP_007175492.1|	-	1.8e-06	27.3	40.4	8.4e-06	25.1	28.0	2.2	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
tRNA-synt_2b	PF00587.20	gi|429217503|ref|YP_007175493.1|	-	8.9e-32	110.0	0.0	1.8e-31	109.0	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|429217503|ref|YP_007175493.1|	-	1.6e-23	82.7	17.8	2.9e-23	81.9	12.3	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
DUF3450	PF11932.3	gi|429217503|ref|YP_007175493.1|	-	0.0016	17.7	1.6	0.0026	17.0	1.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3450)
Syntaxin-6_N	PF09177.6	gi|429217503|ref|YP_007175493.1|	-	0.027	14.8	3.0	0.074	13.4	2.0	1.8	1	0	0	1	1	1	0	Syntaxin	6,	N-terminal
TMPIT	PF07851.8	gi|429217503|ref|YP_007175493.1|	-	0.084	11.9	2.1	0.12	11.3	1.5	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
COG6	PF06419.6	gi|429217503|ref|YP_007175493.1|	-	0.1	10.7	8.1	0.16	10.0	5.6	1.2	1	0	0	1	1	1	0	Conserved	oligomeric	complex	COG6
PilO	PF04350.8	gi|429217503|ref|YP_007175493.1|	-	0.11	12.3	3.5	0.27	11.1	2.4	1.6	1	0	0	1	1	1	0	Pilus	assembly	protein,	PilO
TBPIP	PF07106.8	gi|429217503|ref|YP_007175493.1|	-	0.14	11.7	10.7	0.56	9.7	7.5	2.0	2	0	0	2	2	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
OmpH	PF03938.9	gi|429217503|ref|YP_007175493.1|	-	0.46	10.4	4.7	2.2	8.1	2.4	2.2	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF4071	PF13281.1	gi|429217503|ref|YP_007175493.1|	-	0.5	9.1	6.8	0.79	8.4	4.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4071)
Atg14	PF10186.4	gi|429217503|ref|YP_007175493.1|	-	0.74	8.7	10.0	1.2	8.0	7.0	1.2	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
APG6	PF04111.7	gi|429217503|ref|YP_007175493.1|	-	0.91	8.5	12.5	1.6	7.6	8.7	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg6
AAA_23	PF13476.1	gi|429217503|ref|YP_007175493.1|	-	1	9.6	9.1	2.2	8.5	6.3	1.6	1	0	0	1	1	1	0	AAA	domain
Cluap1	PF10234.4	gi|429217503|ref|YP_007175493.1|	-	1.2	8.2	11.4	2.5	7.2	7.9	1.4	1	0	0	1	1	1	0	Clusterin-associated	protein-1
DUF2229	PF09989.4	gi|429217503|ref|YP_007175493.1|	-	1.2	8.5	3.8	2.7	7.4	2.7	1.5	1	0	0	1	1	1	0	CoA	enzyme	activase	uncharacterised	domain	(DUF2229)
PEX11	PF05648.9	gi|429217503|ref|YP_007175493.1|	-	1.4	8.1	3.4	12	5.1	0.0	2.2	2	0	0	2	2	2	0	Peroxisomal	biogenesis	factor	11	(PEX11)
DUF972	PF06156.8	gi|429217503|ref|YP_007175493.1|	-	2.9	8.2	8.0	7	7.0	5.5	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Histone_HNS	PF00816.16	gi|429217503|ref|YP_007175493.1|	-	3.3	8.2	6.8	75	3.9	4.3	2.5	2	0	0	2	2	2	0	H-NS	histone	family
Uds1	PF15456.1	gi|429217503|ref|YP_007175493.1|	-	3.4	7.6	11.8	5.6	6.9	8.2	1.3	1	0	0	1	1	1	0	Up-regulated	During	Septation
V_ATPase_I	PF01496.14	gi|429217503|ref|YP_007175493.1|	-	3.6	5.3	4.9	5.1	4.8	3.4	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF342	PF03961.8	gi|429217503|ref|YP_007175493.1|	-	6.4	5.0	10.7	9.8	4.4	7.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Ax_dynein_light	PF10211.4	gi|429217503|ref|YP_007175493.1|	-	9.4	6.0	13.9	16	5.2	9.6	1.3	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
DUF2205	PF10224.4	gi|429217503|ref|YP_007175493.1|	-	9.7	5.8	16.6	1.2	8.7	6.8	2.7	2	1	1	3	3	3	0	Predicted	coiled-coil	protein	(DUF2205)
STT3	PF02516.9	gi|429217504|ref|YP_007175494.1|	-	3.6e-15	55.9	51.7	3.6e-15	55.9	35.8	1.6	2	0	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
DUF1206	PF06724.6	gi|429217504|ref|YP_007175494.1|	-	1.1	9.0	0.0	1.1	9.0	0.0	5.7	6	0	0	6	6	6	0	Domain	of	Unknown	Function	(DUF1206)
AA_kinase	PF00696.23	gi|429217505|ref|YP_007175495.1|	-	1.2e-32	113.3	0.0	1.4e-32	113.1	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
SIS_2	PF13580.1	gi|429217505|ref|YP_007175495.1|	-	0.092	12.4	0.3	0.57	9.8	0.0	2.3	2	1	0	2	2	2	0	SIS	domain
DUF650	PF04894.7	gi|429217507|ref|YP_007175497.1|	-	9.4e-95	317.1	0.0	1.3e-94	316.7	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|429217507|ref|YP_007175497.1|	-	5.8e-29	99.9	0.0	1.1e-28	99.0	0.0	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
RrnaAD	PF00398.15	gi|429217508|ref|YP_007175498.1|	-	6.4e-41	140.1	0.2	7.6e-41	139.8	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
MTS	PF05175.9	gi|429217508|ref|YP_007175498.1|	-	0.003	16.9	0.0	0.0061	15.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	small	domain
GidB	PF02527.10	gi|429217508|ref|YP_007175498.1|	-	0.025	13.7	0.0	0.043	12.9	0.0	1.3	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
DUF655	PF04919.7	gi|429217509|ref|YP_007175499.1|	-	5.5e-60	202.1	0.2	8.6e-60	201.5	0.1	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|429217509|ref|YP_007175499.1|	-	0.032	14.2	0.0	0.1	12.6	0.0	1.8	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|429217509|ref|YP_007175499.1|	-	0.06	13.2	0.2	0.15	12.0	0.0	1.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
FF	PF01846.14	gi|429217509|ref|YP_007175499.1|	-	0.32	10.9	3.3	0.29	11.0	0.9	2.0	2	0	0	2	2	2	0	FF	domain
PrmA	PF06325.8	gi|429217510|ref|YP_007175500.1|	-	1.7e-10	40.5	0.2	3.9e-10	39.3	0.0	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_26	PF13659.1	gi|429217510|ref|YP_007175500.1|	-	2e-08	34.3	0.0	2.8e-08	33.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|429217510|ref|YP_007175500.1|	-	6.7e-08	32.0	0.0	9.3e-08	31.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|429217510|ref|YP_007175500.1|	-	5.2e-06	26.1	0.3	1.1e-05	25.0	0.1	1.9	1	1	1	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.14	gi|429217510|ref|YP_007175500.1|	-	6.6e-06	25.8	0.0	9.4e-06	25.3	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|429217510|ref|YP_007175500.1|	-	9.7e-06	26.1	0.0	1.4e-05	25.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|429217510|ref|YP_007175500.1|	-	0.0024	17.4	0.1	0.0043	16.6	0.0	1.4	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_4	PF02390.12	gi|429217510|ref|YP_007175500.1|	-	0.0032	16.5	0.3	0.0057	15.7	0.0	1.5	2	0	0	2	2	2	1	Putative	methyltransferase
Methyltransf_23	PF13489.1	gi|429217510|ref|YP_007175500.1|	-	0.005	16.5	0.0	0.0088	15.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|429217510|ref|YP_007175500.1|	-	0.018	15.4	0.0	0.041	14.3	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|429217510|ref|YP_007175500.1|	-	0.026	15.0	0.0	0.045	14.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|429217510|ref|YP_007175500.1|	-	0.054	12.9	0.0	0.097	12.1	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Cpn60_TCP1	PF00118.19	gi|429217511|ref|YP_007175501.1|	-	4.4e-169	563.1	12.5	5.3e-169	562.9	8.6	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Fe-ADH_2	PF13685.1	gi|429217512|ref|YP_007175502.1|	-	1.2e-63	214.8	0.0	1.5e-63	214.4	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|429217512|ref|YP_007175502.1|	-	1.6e-28	99.3	0.0	4e-28	98.1	0.0	1.6	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|429217512|ref|YP_007175502.1|	-	2.3e-11	43.1	0.0	1.6e-07	30.5	0.0	3.0	2	1	0	2	2	2	2	3-dehydroquinate	synthase
IF2_N	PF04760.10	gi|429217512|ref|YP_007175502.1|	-	0.0069	16.0	0.1	1.7	8.3	0.1	2.7	2	0	0	2	2	2	2	Translation	initiation	factor	IF-2,	N-terminal	region
DUF2120	PF09893.4	gi|429217512|ref|YP_007175502.1|	-	0.085	12.8	0.0	0.17	11.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
PASTA	PF03793.14	gi|429217512|ref|YP_007175502.1|	-	0.085	12.5	0.0	5	6.8	0.0	2.5	2	0	0	2	2	2	0	PASTA	domain
DUF3186	PF11382.3	gi|429217512|ref|YP_007175502.1|	-	0.092	11.8	0.0	0.23	10.5	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3186)
TatC	PF00902.13	gi|429217513|ref|YP_007175503.1|	-	6.7e-40	136.7	32.7	8.5e-40	136.4	22.7	1.1	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Ca_hom_mod	PF14798.1	gi|429217513|ref|YP_007175503.1|	-	0.032	13.1	1.6	0.77	8.6	0.6	2.2	1	1	0	2	2	2	0	Calcium	homeostasis	modulator
TMEM154	PF15102.1	gi|429217513|ref|YP_007175503.1|	-	1.8	8.2	4.0	14	5.3	0.2	2.3	2	0	0	2	2	2	0	TMEM154	protein	family
MttA_Hcf106	PF02416.11	gi|429217514|ref|YP_007175504.1|	-	2.3e-14	52.2	0.5	2.9e-14	51.9	0.3	1.1	1	0	0	1	1	1	1	mttA/Hcf106	family
DUF4330	PF14221.1	gi|429217514|ref|YP_007175504.1|	-	0.053	13.3	0.0	0.057	13.2	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4330)
N_methyl_3	PF13633.1	gi|429217514|ref|YP_007175504.1|	-	0.079	12.8	0.5	0.11	12.4	0.3	1.2	1	0	0	1	1	1	0	Prokaryotic	N-terminal	methylation	site
Lip_A_acyltrans	PF03279.8	gi|429217514|ref|YP_007175504.1|	-	0.12	11.2	0.0	0.12	11.2	0.0	1.0	1	0	0	1	1	1	0	Bacterial	lipid	A	biosynthesis	acyltransferase
TPR_8	PF13181.1	gi|429217515|ref|YP_007175505.1|	-	1.3e-06	27.7	7.9	0.051	13.3	0.0	4.4	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|429217515|ref|YP_007175505.1|	-	6.2e-06	26.0	3.9	1.1	9.2	0.4	3.1	1	1	1	3	3	3	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|429217515|ref|YP_007175505.1|	-	0.00011	21.8	0.2	12	6.0	0.0	5.1	5	0	0	5	5	5	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|429217515|ref|YP_007175505.1|	-	0.0022	17.5	1.3	8.6	6.1	0.0	3.7	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|429217515|ref|YP_007175505.1|	-	0.0025	17.4	2.7	0.0087	15.6	0.1	2.9	3	1	1	4	4	4	1	TPR	repeat
TPR_19	PF14559.1	gi|429217515|ref|YP_007175505.1|	-	0.0025	18.1	3.1	0.17	12.2	0.0	3.8	2	2	1	3	3	3	1	Tetratricopeptide	repeat
SPOB_a	PF14689.1	gi|429217515|ref|YP_007175505.1|	-	0.0095	15.4	0.6	0.35	10.4	0.0	3.0	2	1	0	2	2	2	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
TPR_14	PF13428.1	gi|429217515|ref|YP_007175505.1|	-	0.018	15.6	0.1	1.7	9.5	0.0	3.6	4	1	1	5	5	5	0	Tetratricopeptide	repeat
PPR	PF01535.15	gi|429217515|ref|YP_007175505.1|	-	0.031	14.2	5.3	0.093	12.7	0.0	4.0	5	0	0	5	5	5	0	PPR	repeat
Apc3	PF12895.2	gi|429217515|ref|YP_007175505.1|	-	0.13	12.4	2.8	3.3	7.9	0.1	3.3	1	1	1	3	3	3	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_10	PF13374.1	gi|429217515|ref|YP_007175505.1|	-	0.16	11.9	0.9	54	3.9	0.0	4.0	4	1	1	5	5	5	0	Tetratricopeptide	repeat
DUF1230	PF06799.6	gi|429217517|ref|YP_007175507.1|	-	0.044	13.6	0.0	0.05	13.4	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1230)
ABC2_membrane_5	PF13346.1	gi|429217517|ref|YP_007175507.1|	-	0.071	12.3	3.2	0.1	11.8	2.2	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Curto_V3	PF07436.6	gi|429217517|ref|YP_007175507.1|	-	0.092	12.8	0.3	0.11	12.6	0.2	1.1	1	0	0	1	1	1	0	Curtovirus	V3	protein
DUF2273	PF10031.4	gi|429217517|ref|YP_007175507.1|	-	1.4	8.6	5.7	2.1	8.0	0.0	2.2	2	0	0	2	2	2	0	Small	integral	membrane	protein	(DUF2273)
Cytochrom_B_N_2	PF13631.1	gi|429217518|ref|YP_007175508.1|	-	5e-42	143.5	7.1	5e-42	143.5	4.9	3.7	2	2	2	4	4	4	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|429217518|ref|YP_007175508.1|	-	3.7e-07	30.2	5.7	3.7e-07	30.2	3.9	3.3	3	1	1	4	4	4	1	Cytochrome	b(C-terminal)/b6/petD
DUF3980	PF13140.1	gi|429217518|ref|YP_007175508.1|	-	1.8	8.8	8.6	0.32	11.3	2.4	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3980)
Rieske	PF00355.21	gi|429217519|ref|YP_007175509.1|	-	3.5e-11	42.5	0.3	5.8e-11	41.8	0.2	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
TAT_signal	PF10518.4	gi|429217519|ref|YP_007175509.1|	-	0.00024	20.8	0.0	0.00046	19.9	0.0	1.5	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
CytB6-F_Fe-S	PF08802.5	gi|429217519|ref|YP_007175509.1|	-	0.0021	18.0	0.0	0.0041	17.1	0.0	1.5	1	0	0	1	1	1	1	Cytochrome	B6-F	complex	Fe-S	subunit
EB_dh	PF09459.5	gi|429217520|ref|YP_007175510.1|	-	3.5e-32	111.8	2.6	1.2e-31	110.0	1.8	1.8	1	1	0	1	1	1	1	Ethylbenzene	dehydrogenase
Abhydrolase_3	PF07859.8	gi|429217520|ref|YP_007175510.1|	-	0.058	12.9	0.1	0.14	11.6	0.0	1.6	2	0	0	2	2	2	0	alpha/beta	hydrolase	fold
Proteasome	PF00227.21	gi|429217521|ref|YP_007175511.1|	-	1.3e-54	184.3	1.4	1.5e-54	184.2	1.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Beta-Casp	PF10996.3	gi|429217522|ref|YP_007175512.1|	-	1.1e-32	112.5	0.0	4.3e-32	110.6	0.0	2.0	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|429217522|ref|YP_007175512.1|	-	9.1e-18	64.6	0.3	1.6e-17	63.7	0.2	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|429217522|ref|YP_007175512.1|	-	7.5e-14	51.2	0.1	3.2e-13	49.2	0.0	2.2	2	0	0	2	2	2	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|429217522|ref|YP_007175512.1|	-	2e-10	40.5	0.1	4e-10	39.5	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|429217522|ref|YP_007175512.1|	-	1.6e-05	24.6	0.0	9.2e-05	22.1	0.0	2.2	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
NTP_transf_2	PF01909.18	gi|429217523|ref|YP_007175513.1|	-	6.2e-05	23.2	1.2	0.0001	22.5	0.3	2.1	1	1	1	2	2	2	1	Nucleotidyltransferase	domain
DUF4269	PF14091.1	gi|429217523|ref|YP_007175513.1|	-	0.11	12.4	0.0	0.27	11.1	0.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4269)
Nuc-transf	PF10127.4	gi|429217523|ref|YP_007175513.1|	-	0.11	11.8	0.0	0.26	10.6	0.0	1.6	1	1	0	1	1	1	0	Predicted	nucleotidyltransferase
NTP_transf_2	PF01909.18	gi|429217524|ref|YP_007175514.1|	-	1.5e-07	31.6	0.0	2.7e-07	30.7	0.0	1.5	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Baculo_19	PF04798.7	gi|429217524|ref|YP_007175514.1|	-	0.013	14.9	0.5	0.021	14.1	0.4	1.4	1	0	0	1	1	1	0	Baculovirus	19	kDa	protein	conserved	region
DUF4269	PF14091.1	gi|429217524|ref|YP_007175514.1|	-	0.052	13.4	0.0	0.093	12.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4269)
SIS	PF01380.17	gi|429217525|ref|YP_007175515.1|	-	5.3e-14	51.9	0.1	1.4e-13	50.6	0.0	1.7	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|429217525|ref|YP_007175515.1|	-	7.6e-13	48.3	1.6	6.2e-09	35.6	0.3	2.3	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|429217525|ref|YP_007175515.1|	-	0.2	10.5	1.2	4.7	6.0	0.1	2.1	1	1	0	2	2	2	0	PRMT5	arginine-N-methyltransferase
MIS13	PF08202.6	gi|429217526|ref|YP_007175516.1|	-	0.0034	16.5	2.9	0.0035	16.4	2.0	1.0	1	0	0	1	1	1	1	Mis12-Mtw1	protein	family
Pex19	PF04614.7	gi|429217526|ref|YP_007175516.1|	-	0.011	15.3	0.5	0.014	15.0	0.4	1.0	1	0	0	1	1	1	0	Pex19	protein	family
Reo_sigmaC	PF04582.7	gi|429217526|ref|YP_007175516.1|	-	0.048	12.8	0.1	0.051	12.7	0.1	1.1	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
Adeno_terminal	PF02459.10	gi|429217526|ref|YP_007175516.1|	-	0.16	10.1	1.2	0.15	10.1	0.8	1.1	1	0	0	1	1	1	0	Adenoviral	DNA	terminal	protein
HrpJ	PF07201.6	gi|429217526|ref|YP_007175516.1|	-	0.19	11.7	1.6	0.21	11.5	1.1	1.0	1	0	0	1	1	1	0	HrpJ-like	domain
Prominin	PF05478.6	gi|429217526|ref|YP_007175516.1|	-	0.19	9.2	2.1	0.2	9.1	1.4	1.0	1	0	0	1	1	1	0	Prominin
COG5	PF10392.4	gi|429217526|ref|YP_007175516.1|	-	0.19	11.6	3.2	0.23	11.3	2.2	1.2	1	0	0	1	1	1	0	Golgi	transport	complex	subunit	5
Med4	PF10018.4	gi|429217526|ref|YP_007175516.1|	-	0.3	10.4	0.0	0.3	10.4	0.0	2.0	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
FlaC_arch	PF05377.6	gi|429217526|ref|YP_007175516.1|	-	1.6	8.6	7.3	0.39	10.6	0.5	2.6	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
Glyco_tranf_2_3	PF13641.1	gi|429217527|ref|YP_007175517.1|	-	2.5e-16	60.2	0.0	3.2e-16	59.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|429217527|ref|YP_007175517.1|	-	3.8e-14	52.8	0.0	5.7e-14	52.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
DUF2099	PF09872.4	gi|429217527|ref|YP_007175517.1|	-	0.011	14.7	0.1	0.018	14.0	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2099)
HupE_UreJ_2	PF13795.1	gi|429217527|ref|YP_007175517.1|	-	0.015	14.7	3.5	0.086	12.3	0.2	2.2	2	0	0	2	2	2	0	HupE	/	UreJ	protein
SpoU_methylase	PF00588.14	gi|429217528|ref|YP_007175518.1|	-	1.5e-25	89.6	0.0	2.5e-25	89.0	0.0	1.3	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|429217528|ref|YP_007175518.1|	-	0.00045	19.7	0.0	0.013	15.0	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Semialdhyde_dh	PF01118.19	gi|429217528|ref|YP_007175518.1|	-	0.07	13.4	0.0	0.22	11.8	0.0	1.8	2	1	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
ABC_tran	PF00005.22	gi|429217529|ref|YP_007175519.1|	-	1.2e-42	145.4	0.1	2.5e-20	73.1	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|429217529|ref|YP_007175519.1|	-	3e-13	50.3	23.2	2.4e-06	27.7	3.1	4.6	3	2	0	3	3	2	2	AAA	domain
SMC_N	PF02463.14	gi|429217529|ref|YP_007175519.1|	-	5.3e-12	45.4	8.4	9.8e-07	28.2	1.0	3.6	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.10	gi|429217529|ref|YP_007175519.1|	-	8.8e-12	44.4	3.4	8.8e-12	44.4	2.3	2.1	2	0	0	2	2	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
Fer4_6	PF12837.2	gi|429217529|ref|YP_007175519.1|	-	4.9e-10	38.8	14.4	2.4e-06	27.1	2.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|429217529|ref|YP_007175519.1|	-	1.2e-08	34.1	4.6	1.2e-08	34.1	3.2	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
AAA_17	PF13207.1	gi|429217529|ref|YP_007175519.1|	-	1.6e-07	32.1	5.7	0.0032	18.2	0.8	3.1	2	2	0	2	2	2	2	AAA	domain
Fer4_7	PF12838.2	gi|429217529|ref|YP_007175519.1|	-	3.2e-07	30.6	18.7	8.5e-05	22.8	0.5	2.2	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
MobB	PF03205.9	gi|429217529|ref|YP_007175519.1|	-	5.3e-07	29.4	1.0	0.023	14.4	0.0	3.3	3	0	0	3	3	3	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Fer4_2	PF12797.2	gi|429217529|ref|YP_007175519.1|	-	7.5e-07	28.7	14.4	3.6e-05	23.4	2.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217529|ref|YP_007175519.1|	-	1.1e-06	28.2	7.1	0.00011	21.8	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
AAA	PF00004.24	gi|429217529|ref|YP_007175519.1|	-	2.3e-06	27.8	0.1	0.012	15.8	0.0	2.9	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4_16	PF13484.1	gi|429217529|ref|YP_007175519.1|	-	3e-06	27.8	0.9	0.00077	20.1	0.0	2.6	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
AAA_15	PF13175.1	gi|429217529|ref|YP_007175519.1|	-	4.3e-06	26.0	10.7	0.54	9.2	0.0	4.2	4	0	0	4	4	4	3	AAA	ATPase	domain
Fer4_21	PF14697.1	gi|429217529|ref|YP_007175519.1|	-	4.3e-06	26.4	9.7	7.2e-06	25.7	6.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Miro	PF08477.8	gi|429217529|ref|YP_007175519.1|	-	1.6e-05	25.3	0.1	0.21	12.0	0.0	2.7	2	1	0	2	2	2	2	Miro-like	protein
SbcCD_C	PF13558.1	gi|429217529|ref|YP_007175519.1|	-	8.6e-05	22.3	0.3	0.18	11.7	0.1	2.9	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_33	PF13671.1	gi|429217529|ref|YP_007175519.1|	-	9.9e-05	22.2	0.0	0.34	10.7	0.0	2.8	2	1	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|429217529|ref|YP_007175519.1|	-	0.0002	20.8	0.0	0.5	9.7	0.0	3.2	3	0	0	3	3	3	1	AAA	domain
AAA_14	PF13173.1	gi|429217529|ref|YP_007175519.1|	-	0.00046	20.0	5.3	0.22	11.3	0.0	3.5	2	2	1	3	3	3	2	AAA	domain
Fer4_9	PF13187.1	gi|429217529|ref|YP_007175519.1|	-	0.00054	20.1	8.6	0.0017	18.5	6.0	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_18	PF13238.1	gi|429217529|ref|YP_007175519.1|	-	0.00057	20.1	8.8	0.031	14.5	0.7	3.6	2	2	1	3	3	3	2	AAA	domain
AAA_29	PF13555.1	gi|429217529|ref|YP_007175519.1|	-	0.00098	18.5	0.5	0.25	10.8	0.0	2.5	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Fer4_3	PF12798.2	gi|429217529|ref|YP_007175519.1|	-	0.0015	18.9	4.2	0.0015	18.9	2.9	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|429217529|ref|YP_007175519.1|	-	0.0024	17.8	3.8	0.0093	15.9	3.0	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|429217529|ref|YP_007175519.1|	-	0.0028	17.8	2.4	0.0028	17.8	1.7	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
RNA_helicase	PF00910.17	gi|429217529|ref|YP_007175519.1|	-	0.0035	17.4	0.0	4.2	7.6	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
DUF87	PF01935.12	gi|429217529|ref|YP_007175519.1|	-	0.0036	17.1	0.3	0.014	15.2	0.0	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_23	PF13476.1	gi|429217529|ref|YP_007175519.1|	-	0.0046	17.3	10.1	0.18	12.1	0.1	2.7	2	1	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|429217529|ref|YP_007175519.1|	-	0.0048	16.0	0.1	3.6	6.7	0.0	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|429217529|ref|YP_007175519.1|	-	0.0068	15.1	0.0	0.16	10.6	0.0	2.3	2	1	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
T2SE	PF00437.15	gi|429217529|ref|YP_007175519.1|	-	0.0085	15.0	0.0	0.76	8.6	0.0	2.5	3	0	0	3	3	2	1	Type	II/IV	secretion	system	protein
RecA	PF00154.16	gi|429217529|ref|YP_007175519.1|	-	0.013	14.5	0.1	0.21	10.5	0.0	2.3	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
Fer4_18	PF13746.1	gi|429217529|ref|YP_007175519.1|	-	0.013	15.8	1.0	0.013	15.8	0.7	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
UPF0079	PF02367.12	gi|429217529|ref|YP_007175519.1|	-	0.015	14.9	0.8	6.3	6.4	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_22	PF13401.1	gi|429217529|ref|YP_007175519.1|	-	0.023	14.8	3.9	2.4	8.2	0.6	3.2	2	2	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|429217529|ref|YP_007175519.1|	-	0.029	14.3	0.0	5.6	6.8	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
Thymidylate_kin	PF02223.12	gi|429217529|ref|YP_007175519.1|	-	0.044	13.1	0.9	3.6	6.9	0.1	3.4	4	0	0	4	4	3	0	Thymidylate	kinase
NTPase_1	PF03266.10	gi|429217529|ref|YP_007175519.1|	-	0.047	13.4	2.7	6.4	6.4	0.1	2.7	2	0	0	2	2	2	0	NTPase
ATP-synt_ab	PF00006.20	gi|429217529|ref|YP_007175519.1|	-	0.058	12.8	0.0	4.9	6.5	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NACHT	PF05729.7	gi|429217529|ref|YP_007175519.1|	-	0.073	12.7	1.0	4.8	6.8	0.4	2.4	2	0	0	2	2	2	0	NACHT	domain
Fer4_17	PF13534.1	gi|429217529|ref|YP_007175519.1|	-	0.076	13.3	6.5	0.15	12.4	0.7	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
SRP54	PF00448.17	gi|429217529|ref|YP_007175519.1|	-	0.15	11.5	2.6	4.6	6.6	0.7	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|429217529|ref|YP_007175519.1|	-	0.21	10.3	1.5	3.7	6.2	0.1	2.2	2	0	0	2	2	2	0	ArgK	protein
AAA_24	PF13479.1	gi|429217529|ref|YP_007175519.1|	-	0.45	10.0	4.5	3.4	7.2	0.1	3.2	4	0	0	4	4	2	0	AAA	domain
Fer4_15	PF13459.1	gi|429217529|ref|YP_007175519.1|	-	0.5	10.9	7.1	0.25	11.9	0.9	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
MMR_HSR1	PF01926.18	gi|429217529|ref|YP_007175519.1|	-	8.6	6.3	6.2	17	5.3	0.2	2.9	2	2	0	2	2	2	0	50S	ribosome-binding	GTPase
Lactamase_B_3	PF13483.1	gi|429217530|ref|YP_007175520.1|	-	4.4e-29	101.2	0.2	6.2e-29	100.7	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|429217530|ref|YP_007175520.1|	-	8e-22	77.7	0.3	9.8e-22	77.4	0.2	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|429217530|ref|YP_007175520.1|	-	1.9e-16	60.3	1.6	4.2e-16	59.1	1.1	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
dTMP_synthase	PF02593.9	gi|429217530|ref|YP_007175520.1|	-	0.12	11.6	0.0	0.18	11.1	0.0	1.2	1	0	0	1	1	1	0	Thymidylate	synthase
Peptidase_M24	PF00557.19	gi|429217531|ref|YP_007175521.1|	-	6.6e-37	127.0	0.0	7.6e-37	126.8	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
DUF1512	PF07431.7	gi|429217532|ref|YP_007175522.1|	-	1.1e-130	435.5	2.2	1.3e-130	435.3	1.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
SpoIISA_toxin	PF14171.1	gi|429217533|ref|YP_007175523.1|	-	0.11	11.7	0.0	0.14	11.4	0.0	1.1	1	0	0	1	1	1	0	Toxin	SpoIISA,	type	II	toxin-antitoxin	system
DZR	PF12773.2	gi|429217534|ref|YP_007175524.1|	-	0.12	12.2	3.8	0.9	9.4	2.2	2.0	1	1	1	2	2	2	0	Double	zinc	ribbon
Zn_ribbon_2	PF12674.2	gi|429217534|ref|YP_007175524.1|	-	0.19	12.0	2.3	0.26	11.6	1.6	1.5	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
Vfa1	PF08432.5	gi|429217534|ref|YP_007175524.1|	-	0.75	9.8	3.6	1.1	9.2	2.5	1.4	1	1	0	1	1	1	0	AAA-ATPase	Vps4-associated	protein	1
Cys_rich_CPXG	PF14255.1	gi|429217534|ref|YP_007175524.1|	-	1.2	8.9	4.2	0.81	9.5	0.2	2.1	1	1	1	2	2	2	0	Cysteine-rich	CPXCG
DUF164	PF02591.10	gi|429217534|ref|YP_007175524.1|	-	4.4	7.2	6.0	8.3	6.3	3.0	2.2	2	1	1	3	3	3	0	Putative	zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|429217535|ref|YP_007175525.1|	-	8.5e-21	73.3	10.2	1.2e-19	69.5	1.2	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
TF_Zn_Ribbon	PF08271.7	gi|429217535|ref|YP_007175525.1|	-	7.5e-10	37.9	3.0	0.00099	18.3	0.2	3.5	3	1	0	3	3	3	2	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.6	gi|429217535|ref|YP_007175525.1|	-	5.7e-08	32.2	2.6	0.00081	19.0	0.0	2.8	2	1	0	2	2	2	2	Putative	transposase	DNA-binding	domain
zinc_ribbon_4	PF13717.1	gi|429217535|ref|YP_007175525.1|	-	1.2e-07	31.2	7.8	0.21	11.2	0.0	4.3	4	0	0	4	4	4	3	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429217535|ref|YP_007175525.1|	-	2e-07	30.2	12.3	0.19	11.2	0.3	4.2	4	0	0	4	4	4	3	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|429217535|ref|YP_007175525.1|	-	2.1e-07	30.5	0.8	2.1e-07	30.5	0.6	3.2	2	1	0	2	2	2	1	RNA	polymerases	M/15	Kd	subunit
zf-ribbon_3	PF13248.1	gi|429217535|ref|YP_007175525.1|	-	3.5e-07	29.2	12.6	0.00036	19.6	3.2	3.9	3	1	2	5	5	5	4	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|429217535|ref|YP_007175525.1|	-	4.9e-07	29.4	10.4	0.00027	20.6	0.4	3.1	2	1	1	3	3	3	1	Transposase	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|429217535|ref|YP_007175525.1|	-	8.4e-07	28.4	10.7	0.19	11.3	0.0	4.4	4	1	0	4	4	4	2	zinc-ribbon	domain
DZR	PF12773.2	gi|429217535|ref|YP_007175525.1|	-	2.1e-06	27.4	6.5	0.0046	16.7	0.6	2.9	2	2	0	2	2	2	2	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|429217535|ref|YP_007175525.1|	-	4.8e-06	26.4	7.8	3.3	7.7	0.5	4.3	4	0	0	4	4	4	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|429217535|ref|YP_007175525.1|	-	1.1e-05	25.3	8.3	0.99	9.4	0.0	4.2	4	0	0	4	4	4	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_ribbon_recom	PF13408.1	gi|429217535|ref|YP_007175525.1|	-	1.4e-05	25.2	8.2	0.0043	17.2	0.7	2.7	2	1	0	2	2	2	2	Recombinase	zinc	beta	ribbon	domain
DUF2387	PF09526.5	gi|429217535|ref|YP_007175525.1|	-	1.4e-05	24.8	5.1	0.038	13.9	0.1	2.6	2	1	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
zf-NADH-PPase	PF09297.6	gi|429217535|ref|YP_007175525.1|	-	1.5e-05	24.4	10.1	0.0089	15.5	1.6	4.1	3	1	1	4	4	4	2	NADH	pyrophosphatase	zinc	ribbon	domain
zf-TFIIB	PF13453.1	gi|429217535|ref|YP_007175525.1|	-	3.8e-05	22.7	7.4	0.012	14.7	0.4	2.4	2	0	0	2	2	2	2	Transcription	factor	zinc-finger
UPF0547	PF10571.4	gi|429217535|ref|YP_007175525.1|	-	0.00026	20.6	12.5	3.8	7.2	0.1	4.2	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
Elf1	PF05129.8	gi|429217535|ref|YP_007175525.1|	-	0.00094	18.8	2.3	0.8	9.4	0.1	2.6	1	1	1	2	2	2	2	Transcription	elongation	factor	Elf1	like
PhnA_Zn_Ribbon	PF08274.7	gi|429217535|ref|YP_007175525.1|	-	0.0011	18.6	6.7	1.8	8.4	0.1	3.8	3	1	0	3	3	3	1	PhnA	Zinc-Ribbon
Lar_restr_allev	PF14354.1	gi|429217535|ref|YP_007175525.1|	-	0.0015	18.7	7.2	0.48	10.7	1.6	3.1	1	1	1	2	2	2	2	Restriction	alleviation	protein	Lar
IBR	PF01485.16	gi|429217535|ref|YP_007175525.1|	-	0.0021	17.8	5.9	0.077	12.8	0.3	3.1	2	1	1	3	3	3	1	IBR	domain
HypA	PF01155.14	gi|429217535|ref|YP_007175525.1|	-	0.0022	17.6	4.9	0.087	12.5	0.2	2.9	1	1	2	3	3	3	2	Hydrogenase	expression/synthesis	hypA	family
A2L_zn_ribbon	PF08792.5	gi|429217535|ref|YP_007175525.1|	-	0.0029	17.0	10.5	0.49	9.9	0.1	4.0	4	0	0	4	4	4	1	A2L	zinc	ribbon	domain
FdhE	PF04216.7	gi|429217535|ref|YP_007175525.1|	-	0.0054	16.4	2.8	0.17	11.5	0.2	2.2	2	0	0	2	2	2	1	Protein	involved	in	formate	dehydrogenase	formation
Terminase_GpA	PF05876.7	gi|429217535|ref|YP_007175525.1|	-	0.0058	15.0	4.5	0.0087	14.4	0.2	2.5	2	1	0	2	2	2	1	Phage	terminase	large	subunit	(GpA)
zf-DNA_Pol	PF08996.5	gi|429217535|ref|YP_007175525.1|	-	0.006	15.9	2.8	0.65	9.3	0.0	2.8	1	1	2	3	3	3	1	DNA	Polymerase	alpha	zinc	finger
Cys_rich_KTR	PF14205.1	gi|429217535|ref|YP_007175525.1|	-	0.008	15.6	8.3	0.78	9.2	0.0	3.7	4	0	0	4	4	3	1	Cysteine-rich	KTR
DUF2082	PF09855.4	gi|429217535|ref|YP_007175525.1|	-	0.025	14.4	10.9	6	6.7	0.1	4.1	4	0	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Ogr_Delta	PF04606.7	gi|429217535|ref|YP_007175525.1|	-	0.035	13.7	11.0	14	5.4	0.2	4.2	4	0	0	4	4	4	0	Ogr/Delta-like	zinc	finger
TerY-C	PF15616.1	gi|429217535|ref|YP_007175525.1|	-	0.041	13.8	5.2	0.45	10.4	0.3	2.6	2	2	0	2	2	2	0	TerY-C	metal	binding	domain
RNHCP	PF12647.2	gi|429217535|ref|YP_007175525.1|	-	0.045	13.5	0.2	0.045	13.5	0.1	2.8	2	1	1	3	3	3	0	RNHCP	domain
zf-Di19	PF05605.7	gi|429217535|ref|YP_007175525.1|	-	0.05	13.7	1.4	2.1	8.5	0.0	3.1	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
YhfH	PF14149.1	gi|429217535|ref|YP_007175525.1|	-	0.062	13.0	4.3	54	3.6	0.1	4.1	4	0	0	4	4	4	0	YhfH-like	protein
Rubredoxin	PF00301.15	gi|429217535|ref|YP_007175525.1|	-	0.069	13.0	12.0	12	5.8	0.8	4.2	4	0	0	4	4	4	0	Rubredoxin
PolC_DP2	PF03833.8	gi|429217535|ref|YP_007175525.1|	-	0.072	10.7	2.0	0.75	7.3	0.1	2.0	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
Ribosomal_L32p	PF01783.18	gi|429217535|ref|YP_007175525.1|	-	0.09	12.9	6.2	3.2	8.0	1.3	3.8	3	2	0	3	3	3	0	Ribosomal	L32p	protein	family
UDPG_MGDP_dh_N	PF03721.9	gi|429217535|ref|YP_007175525.1|	-	0.11	11.8	0.0	0.13	11.5	0.0	1.1	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Zn_Tnp_IS1	PF03811.8	gi|429217535|ref|YP_007175525.1|	-	0.11	11.9	9.1	0.7	9.4	0.0	3.9	4	0	0	4	4	4	0	InsA	N-terminal	domain
DUF329	PF03884.9	gi|429217535|ref|YP_007175525.1|	-	0.11	12.0	4.8	16	5.1	0.0	3.7	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF329)
DUF164	PF02591.10	gi|429217535|ref|YP_007175525.1|	-	0.12	12.1	4.8	7.2	6.5	0.0	3.8	4	0	0	4	4	4	0	Putative	zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|429217535|ref|YP_007175525.1|	-	0.17	12.2	17.2	0.23	11.7	0.4	4.2	4	1	0	4	4	4	0	Zinc-finger	double	domain
DUF35_N	PF12172.3	gi|429217535|ref|YP_007175525.1|	-	0.27	11.1	11.2	16	5.5	0.1	4.2	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-IS66	PF13005.2	gi|429217535|ref|YP_007175525.1|	-	0.28	11.1	9.0	12	6.0	0.1	4.2	4	0	0	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
Trm112p	PF03966.11	gi|429217535|ref|YP_007175525.1|	-	0.32	11.3	3.1	15	6.0	2.7	2.8	1	1	1	2	2	2	0	Trm112p-like	protein
FYDLN_acid	PF09538.5	gi|429217535|ref|YP_007175525.1|	-	0.34	11.5	7.9	2.6	8.6	1.3	3.5	2	2	2	4	4	3	0	Protein	of	unknown	function	(FYDLN_acid)
Baculo_LEF5_C	PF11792.3	gi|429217535|ref|YP_007175525.1|	-	0.34	10.3	0.1	0.34	10.3	0.1	3.0	3	1	1	4	4	3	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
DNA_RNApol_7kD	PF03604.8	gi|429217535|ref|YP_007175525.1|	-	0.35	10.3	14.5	4.8	6.7	0.3	4.3	3	1	2	5	5	5	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-RING_3	PF14369.1	gi|429217535|ref|YP_007175525.1|	-	0.43	10.6	7.2	11	6.0	0.1	3.6	4	0	0	4	4	3	0	zinc-finger
Nudix_N_2	PF14803.1	gi|429217535|ref|YP_007175525.1|	-	0.49	10.1	15.8	2	8.1	3.2	3.8	2	2	0	2	2	2	0	Nudix	N-terminal
DUF2296	PF10058.4	gi|429217535|ref|YP_007175525.1|	-	0.52	10.0	7.8	20	5.0	0.1	3.9	4	0	0	4	4	4	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-CHY	PF05495.7	gi|429217535|ref|YP_007175525.1|	-	0.53	10.4	4.6	4.2	7.6	0.1	2.7	1	1	0	2	2	2	0	CHY	zinc	finger
NOB1_Zn_bind	PF08772.6	gi|429217535|ref|YP_007175525.1|	-	0.68	9.8	15.0	11	5.8	0.0	3.9	2	2	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
CpXC	PF14353.1	gi|429217535|ref|YP_007175525.1|	-	0.83	9.6	10.2	0.83	9.6	0.1	3.7	2	1	2	4	4	4	0	CpXC	protein
zf-FPG_IleRS	PF06827.9	gi|429217535|ref|YP_007175525.1|	-	0.95	9.1	9.5	2.6	7.7	0.4	3.7	4	0	0	4	4	3	0	Zinc	finger	found	in	FPG	and	IleRS
Cys_rich_CPCC	PF14206.1	gi|429217535|ref|YP_007175525.1|	-	1.5	8.4	7.1	0.62	9.6	0.6	3.0	3	1	0	3	3	3	0	Cysteine-rich	CPCC
Ribosomal_L37e	PF01907.14	gi|429217535|ref|YP_007175525.1|	-	1.7	8.4	8.9	28	4.6	0.0	3.7	3	1	0	3	3	3	0	Ribosomal	protein	L37e
Zn_Tnp_IS91	PF14319.1	gi|429217535|ref|YP_007175525.1|	-	1.7	8.1	8.6	10	5.6	0.2	3.4	2	2	1	3	3	3	0	Transposase	zinc-binding	domain
Opy2	PF09463.5	gi|429217535|ref|YP_007175525.1|	-	2.3	8.4	5.8	41	4.3	0.0	3.8	4	0	0	4	4	4	0	Opy2	protein
DUF1178	PF06676.6	gi|429217535|ref|YP_007175525.1|	-	2.6	8.2	5.7	13	5.9	0.0	3.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1178)
Mu-like_Com	PF10122.4	gi|429217535|ref|YP_007175525.1|	-	2.7	7.1	13.8	0.43	9.6	0.5	3.6	2	2	1	3	3	3	0	Mu-like	prophage	protein	Com
zf-C2H2_4	PF13894.1	gi|429217535|ref|YP_007175525.1|	-	2.8	8.4	9.9	71	4.0	0.0	4.1	4	0	0	4	4	4	0	C2H2-type	zinc	finger
zf-Mss51	PF13824.1	gi|429217535|ref|YP_007175525.1|	-	3	7.7	12.0	16	5.4	2.1	3.3	1	1	2	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
C1_1	PF00130.17	gi|429217535|ref|YP_007175525.1|	-	3.3	7.5	8.3	1.1	9.0	0.5	2.6	2	1	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-tcix	PF14952.1	gi|429217535|ref|YP_007175525.1|	-	3.9	6.8	15.5	19	4.7	0.2	4.1	4	0	0	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
RecR	PF02132.10	gi|429217535|ref|YP_007175525.1|	-	4.7	6.7	9.7	22	4.5	0.0	4.0	4	1	1	5	5	4	0	RecR	protein
GFA	PF04828.9	gi|429217535|ref|YP_007175525.1|	-	4.8	7.1	11.0	5.4	7.0	0.1	3.7	1	1	3	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-HIT	PF04438.11	gi|429217535|ref|YP_007175525.1|	-	4.9	6.8	16.4	8.4	6.1	0.0	4.1	4	0	0	4	4	4	0	HIT	zinc	finger
DUF3797	PF12677.2	gi|429217535|ref|YP_007175525.1|	-	5	6.8	19.5	9.6	5.9	0.5	4.3	2	2	2	4	4	3	0	Domain	of	unknown	function	(DUF3797)
DUF1936	PF09151.5	gi|429217535|ref|YP_007175525.1|	-	5.1	6.6	14.9	11	5.6	0.3	4.0	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1936)
Prok-RING_1	PF14446.1	gi|429217535|ref|YP_007175525.1|	-	7.3	6.4	9.1	9.1	6.1	1.0	3.6	3	1	0	3	3	3	0	Prokaryotic	RING	finger	family	1
zf-C4_Topoisom	PF01396.14	gi|429217535|ref|YP_007175525.1|	-	8.1	6.0	18.7	22	4.6	4.8	3.7	2	2	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
tRNA-synt_1g	PF09334.6	gi|429217536|ref|YP_007175526.1|	-	1.9e-147	491.0	0.1	2.4e-147	490.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|429217536|ref|YP_007175526.1|	-	1.5e-10	41.0	0.1	2.6e-10	40.2	0.1	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1	PF00133.17	gi|429217536|ref|YP_007175526.1|	-	2.9e-08	32.1	0.4	0.00014	20.0	0.0	3.5	2	2	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.14	gi|429217536|ref|YP_007175526.1|	-	5.3e-08	32.3	0.2	0.00029	20.0	0.0	3.6	5	0	0	5	5	5	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|429217536|ref|YP_007175526.1|	-	0.0078	14.9	0.0	0.29	9.7	0.0	2.5	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
DZR	PF12773.2	gi|429217536|ref|YP_007175526.1|	-	0.034	13.9	2.6	0.068	12.9	1.8	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
TerY-C	PF15616.1	gi|429217536|ref|YP_007175526.1|	-	0.21	11.5	1.7	0.4	10.6	1.2	1.5	1	0	0	1	1	1	0	TerY-C	metal	binding	domain
zf-ribbon_3	PF13248.1	gi|429217536|ref|YP_007175526.1|	-	0.36	10.0	6.1	13	5.1	4.2	2.4	1	1	0	1	1	1	0	zinc-ribbon	domain
Pox_I3	PF04661.7	gi|429217537|ref|YP_007175527.1|	-	0.033	12.9	0.6	0.039	12.7	0.4	1.1	1	0	0	1	1	1	0	Poxvirus	I3	ssDNA-binding	protein
Antitoxin-MazE	PF04014.13	gi|429217538|ref|YP_007175528.1|	-	8.7e-09	34.9	0.1	1.6e-08	34.0	0.1	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
ACT	PF01842.20	gi|429217538|ref|YP_007175528.1|	-	4.3e-08	32.4	0.0	8.5e-08	31.5	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
MraZ	PF02381.13	gi|429217538|ref|YP_007175528.1|	-	0.00021	20.9	0.0	0.00034	20.2	0.0	1.4	1	0	0	1	1	1	1	MraZ	protein
ACT_4	PF13291.1	gi|429217538|ref|YP_007175528.1|	-	0.0024	18.1	0.7	0.0046	17.2	0.5	1.5	1	0	0	1	1	1	1	ACT	domain
Anp1	PF03452.9	gi|429217538|ref|YP_007175528.1|	-	0.012	14.7	0.1	0.014	14.5	0.1	1.1	1	0	0	1	1	1	0	Anp1
Ribosomal_S19	PF00203.16	gi|429217539|ref|YP_007175529.1|	-	1.8e-27	94.7	0.4	2.7e-27	94.1	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L22	PF00237.14	gi|429217540|ref|YP_007175530.1|	-	2e-30	104.8	0.3	2.4e-30	104.5	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S3_C	PF00189.15	gi|429217541|ref|YP_007175531.1|	-	1.6e-17	63.5	4.2	7.4e-17	61.3	0.5	2.8	3	0	0	3	3	3	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|429217541|ref|YP_007175531.1|	-	1.1e-11	44.0	0.0	1.1e-11	44.0	0.0	2.6	2	1	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|429217541|ref|YP_007175531.1|	-	0.0049	16.4	2.7	0.017	14.7	0.0	3.0	3	0	0	3	3	3	1	KH	domain
KH_3	PF13014.1	gi|429217541|ref|YP_007175531.1|	-	0.012	15.2	2.9	0.044	13.4	0.1	3.3	4	0	0	4	4	4	0	KH	domain
KH_4	PF13083.1	gi|429217541|ref|YP_007175531.1|	-	0.014	15.0	0.1	0.014	15.0	0.0	3.0	3	1	0	3	3	3	0	KH	domain
Reticulon	PF02453.12	gi|429217541|ref|YP_007175531.1|	-	0.096	12.2	0.1	0.27	10.8	0.1	1.8	2	0	0	2	2	2	0	Reticulon
Ribosomal_L29	PF00831.18	gi|429217542|ref|YP_007175532.1|	-	5.5e-16	58.0	5.2	6.3e-16	57.8	3.6	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
DUF4208	PF13907.1	gi|429217542|ref|YP_007175532.1|	-	0.026	14.7	3.3	0.029	14.5	2.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4208)
Zein-binding	PF04576.10	gi|429217542|ref|YP_007175532.1|	-	0.032	14.3	0.9	0.041	14.0	0.6	1.2	1	0	0	1	1	1	0	Zein-binding
Rep_1	PF01446.12	gi|429217542|ref|YP_007175532.1|	-	0.099	11.9	3.8	0.1	11.9	2.6	1.0	1	0	0	1	1	1	0	Replication	protein
SPX	PF03105.14	gi|429217542|ref|YP_007175532.1|	-	0.11	12.1	2.2	0.13	12.0	1.5	1.1	1	0	0	1	1	1	0	SPX	domain
UPF0086	PF01868.11	gi|429217543|ref|YP_007175533.1|	-	8.8e-25	86.1	0.4	9.8e-25	86.0	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
YcxB	PF14317.1	gi|429217543|ref|YP_007175533.1|	-	0.066	12.4	0.0	0.09	12.0	0.0	1.3	1	0	0	1	1	1	0	YcxB-like	protein
CopK	PF11525.3	gi|429217543|ref|YP_007175533.1|	-	0.13	11.8	0.0	0.18	11.4	0.0	1.4	1	0	0	1	1	1	0	Copper	resistance	protein	K
Ribosomal_S17	PF00366.15	gi|429217544|ref|YP_007175534.1|	-	2.2e-16	59.6	1.2	2.8e-16	59.3	0.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_L14	PF00238.14	gi|429217545|ref|YP_007175535.1|	-	5.3e-34	116.5	0.1	6.1e-34	116.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
KOW	PF00467.24	gi|429217546|ref|YP_007175536.1|	-	3.9e-08	32.7	6.9	8.7e-08	31.5	4.8	1.7	1	0	0	1	1	1	1	KOW	motif
Ribosomal_S4e	PF00900.15	gi|429217547|ref|YP_007175537.1|	-	1e-25	89.1	0.3	2.4e-25	88.0	0.2	1.6	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.7	gi|429217547|ref|YP_007175537.1|	-	1e-11	44.4	2.9	1.8e-11	43.7	2.0	1.4	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.20	gi|429217547|ref|YP_007175537.1|	-	5.7e-10	38.4	0.1	1.4e-09	37.2	0.1	1.7	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.24	gi|429217547|ref|YP_007175537.1|	-	0.00026	20.6	0.1	0.00063	19.3	0.1	1.7	1	0	0	1	1	1	1	KOW	motif
S4_2	PF13275.1	gi|429217547|ref|YP_007175537.1|	-	0.0084	15.6	0.0	0.018	14.6	0.0	1.6	1	0	0	1	1	1	1	S4	domain
Ribosomal_L5_C	PF00673.16	gi|429217548|ref|YP_007175538.1|	-	1.7e-22	78.9	0.0	2.6e-22	78.3	0.0	1.3	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|429217548|ref|YP_007175538.1|	-	3.4e-12	45.9	0.3	3.4e-12	45.9	0.2	1.8	2	0	0	2	2	2	1	Ribosomal	protein	L5
Ribosomal_S14	PF00253.16	gi|429217549|ref|YP_007175539.1|	-	6.4e-19	67.0	3.5	7.4e-19	66.8	2.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
zf-FPG_IleRS	PF06827.9	gi|429217549|ref|YP_007175539.1|	-	0.0015	18.1	2.8	0.0028	17.2	1.9	1.4	1	0	0	1	1	1	1	Zinc	finger	found	in	FPG	and	IleRS
DZR	PF12773.2	gi|429217549|ref|YP_007175539.1|	-	0.0057	16.4	0.3	0.0084	15.9	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Ribosomal_L37ae	PF01780.14	gi|429217549|ref|YP_007175539.1|	-	0.012	15.4	0.3	0.013	15.3	0.2	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
Zn_Tnp_IS91	PF14319.1	gi|429217549|ref|YP_007175539.1|	-	0.067	12.7	0.3	0.067	12.7	0.2	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|429217549|ref|YP_007175539.1|	-	0.071	12.9	2.1	0.087	12.6	1.5	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|429217549|ref|YP_007175539.1|	-	0.12	11.9	2.9	2.8	7.4	0.4	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
A2L_zn_ribbon	PF08792.5	gi|429217549|ref|YP_007175539.1|	-	0.12	11.8	1.0	0.16	11.4	0.7	1.2	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF1451	PF07295.6	gi|429217549|ref|YP_007175539.1|	-	0.13	11.9	0.3	0.14	11.8	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
UPF0547	PF10571.4	gi|429217549|ref|YP_007175539.1|	-	0.19	11.4	1.8	1	9.1	0.0	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF2039	PF10217.4	gi|429217549|ref|YP_007175539.1|	-	0.24	11.4	3.0	0.34	10.9	1.9	1.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2039)
zf-CCHC_3	PF13917.1	gi|429217549|ref|YP_007175539.1|	-	0.24	11.1	0.4	0.24	11.1	0.3	2.0	2	0	0	2	2	2	0	Zinc	knuckle
Ribosomal_S8	PF00410.14	gi|429217550|ref|YP_007175540.1|	-	6.8e-26	90.6	0.1	8.8e-26	90.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8
Thioredoxin_3	PF13192.1	gi|429217552|ref|YP_007175542.1|	-	1.6e-29	101.4	4.0	2.4e-16	59.2	0.1	2.4	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|429217552|ref|YP_007175542.1|	-	6.6e-06	26.2	0.7	0.22	11.7	0.2	3.1	2	1	0	2	2	2	2	Thioredoxin-like	domain
Thioredoxin_4	PF13462.1	gi|429217552|ref|YP_007175542.1|	-	1.8e-05	24.7	4.4	0.5	10.3	0.0	4.0	2	2	2	4	4	4	2	Thioredoxin
Thioredoxin	PF00085.15	gi|429217552|ref|YP_007175542.1|	-	0.00072	19.2	0.3	0.019	14.6	0.0	2.2	2	0	0	2	2	2	1	Thioredoxin
Glutaredoxin	PF00462.19	gi|429217552|ref|YP_007175542.1|	-	0.00081	19.3	5.2	0.34	10.9	0.2	4.5	2	2	2	4	4	4	2	Glutaredoxin
Thioredoxin_9	PF14595.1	gi|429217552|ref|YP_007175542.1|	-	0.022	14.3	1.5	1.9	8.0	0.0	2.4	1	1	1	2	2	2	0	Thioredoxin
NEP	PF10167.4	gi|429217552|ref|YP_007175542.1|	-	0.024	14.3	0.3	0.06	13.0	0.2	1.7	1	1	0	1	1	1	0	Uncharacterised	conserved	protein
Thioredoxin_8	PF13905.1	gi|429217552|ref|YP_007175542.1|	-	0.028	14.5	0.6	13	5.9	0.0	3.2	2	1	1	3	3	3	0	Thioredoxin-like
DUF373	PF04123.8	gi|429217553|ref|YP_007175543.1|	-	3.3e-70	236.8	10.4	4.2e-70	236.4	7.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
DUF3798	PF12683.2	gi|429217553|ref|YP_007175543.1|	-	0.084	11.9	0.0	0.13	11.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3798)
TerC	PF03741.11	gi|429217553|ref|YP_007175543.1|	-	0.21	10.9	12.2	2.2	7.7	8.5	2.3	1	1	0	1	1	1	0	Integral	membrane	protein	TerC	family
OppC_N	PF12911.2	gi|429217553|ref|YP_007175543.1|	-	7.7	5.9	7.0	21	4.5	0.8	2.8	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
tRNA_int_endo	PF01974.12	gi|429217554|ref|YP_007175544.1|	-	6.2e-05	22.7	0.0	0.00014	21.5	0.0	1.6	1	1	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
T2SE	PF00437.15	gi|429217556|ref|YP_007175546.1|	-	4.3e-39	134.0	0.0	7e-39	133.3	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_18	PF13238.1	gi|429217556|ref|YP_007175546.1|	-	8.6e-05	22.8	2.1	0.00029	21.1	0.0	2.8	3	1	0	3	3	3	1	AAA	domain
AAA_29	PF13555.1	gi|429217556|ref|YP_007175546.1|	-	0.00058	19.3	0.1	0.0013	18.2	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|429217556|ref|YP_007175546.1|	-	0.001	19.3	0.0	0.0024	18.1	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_14	PF13173.1	gi|429217556|ref|YP_007175546.1|	-	0.001	18.9	0.0	0.007	16.2	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|429217556|ref|YP_007175546.1|	-	0.0013	19.5	0.0	0.0087	16.8	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|429217556|ref|YP_007175546.1|	-	0.0014	18.8	0.0	0.0031	17.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|429217556|ref|YP_007175546.1|	-	0.0029	17.2	0.0	0.0057	16.3	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
cobW	PF02492.14	gi|429217556|ref|YP_007175546.1|	-	0.0041	16.5	0.1	0.0077	15.6	0.1	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|429217556|ref|YP_007175546.1|	-	0.0041	16.8	0.0	0.01	15.5	0.0	1.6	2	0	0	2	2	1	1	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|429217556|ref|YP_007175546.1|	-	0.0079	15.3	0.0	0.015	14.4	0.0	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
UPF0079	PF02367.12	gi|429217556|ref|YP_007175546.1|	-	0.021	14.4	0.1	0.079	12.5	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_10	PF12846.2	gi|429217556|ref|YP_007175546.1|	-	0.029	13.7	0.0	0.19	11.1	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
AAA_30	PF13604.1	gi|429217556|ref|YP_007175546.1|	-	0.041	13.4	0.1	0.12	11.8	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|429217556|ref|YP_007175546.1|	-	0.047	13.3	0.0	0.14	11.8	0.0	1.8	1	0	0	1	1	1	0	NTPase
Zeta_toxin	PF06414.7	gi|429217556|ref|YP_007175546.1|	-	0.053	12.6	0.0	0.094	11.8	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
PduV-EutP	PF10662.4	gi|429217556|ref|YP_007175546.1|	-	0.056	12.9	0.0	0.22	10.9	0.0	1.9	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_16	PF13191.1	gi|429217556|ref|YP_007175546.1|	-	0.077	12.9	0.2	0.18	11.7	0.1	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
Miro	PF08477.8	gi|429217556|ref|YP_007175546.1|	-	0.089	13.2	0.0	0.21	12.0	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_25	PF13481.1	gi|429217556|ref|YP_007175546.1|	-	0.094	12.1	0.2	0.17	11.2	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|429217556|ref|YP_007175546.1|	-	0.14	11.6	0.0	0.37	10.2	0.0	1.7	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_33	PF13671.1	gi|429217556|ref|YP_007175546.1|	-	0.18	11.6	0.0	0.29	11.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|429217556|ref|YP_007175546.1|	-	3	8.1	17.4	0.16	12.2	4.6	3.1	2	2	0	2	2	2	0	AAA	domain
MacB_PCD	PF12704.2	gi|429217557|ref|YP_007175547.1|	-	0.033	13.7	7.4	0.097	12.2	5.1	1.7	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
DUF3574	PF12098.3	gi|429217557|ref|YP_007175547.1|	-	0.033	13.7	0.4	0.12	11.9	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3574)
DS	PF01916.12	gi|429217558|ref|YP_007175548.1|	-	2.6e-68	230.3	0.2	3e-68	230.1	0.1	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
SLBB	PF10531.4	gi|429217558|ref|YP_007175548.1|	-	0.025	14.4	0.0	6.7	6.6	0.0	2.6	2	0	0	2	2	2	0	SLBB	domain
Topo-VIb_trans	PF09239.6	gi|429217559|ref|YP_007175549.1|	-	2.3e-62	209.2	0.2	5.1e-62	208.1	0.1	1.6	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.21	gi|429217559|ref|YP_007175549.1|	-	4.7e-14	52.0	0.1	2.5e-13	49.6	0.0	2.0	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|429217559|ref|YP_007175549.1|	-	5.5e-13	48.7	0.0	1.4e-12	47.4	0.0	1.7	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|429217559|ref|YP_007175549.1|	-	0.0064	15.0	0.6	0.012	14.1	0.0	1.7	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Syntaxin_2	PF14523.1	gi|429217559|ref|YP_007175549.1|	-	0.11	12.5	0.7	0.27	11.2	0.1	1.9	2	0	0	2	2	2	0	Syntaxin-like	protein
TP6A_N	PF04406.9	gi|429217560|ref|YP_007175550.1|	-	7.8e-25	86.3	0.2	1.4e-24	85.5	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|429217560|ref|YP_007175550.1|	-	0.035	13.9	0.0	0.06	13.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
HAD_2	PF13419.1	gi|429217560|ref|YP_007175550.1|	-	0.046	13.9	0.0	0.11	12.6	0.0	1.6	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
PCNA_N	PF00705.13	gi|429217561|ref|YP_007175551.1|	-	3.3e-12	46.0	0.0	5.4e-11	42.1	0.0	2.1	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|429217561|ref|YP_007175551.1|	-	0.0017	18.3	0.9	0.028	14.3	0.2	2.8	2	2	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad9	PF04139.8	gi|429217561|ref|YP_007175551.1|	-	0.0027	16.8	0.1	0.0034	16.5	0.0	1.3	1	1	0	1	1	1	1	Rad9
Hus1	PF04005.7	gi|429217561|ref|YP_007175551.1|	-	0.11	11.4	0.0	0.2	10.5	0.0	1.4	1	0	0	1	1	1	0	Hus1-like	protein
tRNA-synt_2	PF00152.15	gi|429217562|ref|YP_007175552.1|	-	1.7e-83	280.1	0.0	2.7e-83	279.5	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|429217562|ref|YP_007175552.1|	-	1.4e-10	40.8	0.3	2.6e-10	40.0	0.2	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|429217562|ref|YP_007175552.1|	-	0.023	13.9	0.1	4.9	6.2	0.0	2.3	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
ATP_bind_4	PF01902.12	gi|429217563|ref|YP_007175553.1|	-	3.3e-54	183.5	0.1	3.9e-54	183.3	0.1	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|429217563|ref|YP_007175553.1|	-	0.015	14.6	0.0	0.032	13.5	0.0	1.7	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
TatD_DNase	PF01026.16	gi|429217564|ref|YP_007175554.1|	-	8.1e-46	156.2	0.0	9.5e-46	156.0	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Endonuc_Holl	PF10107.4	gi|429217565|ref|YP_007175555.1|	-	8.3e-42	142.5	1.9	1e-41	142.2	1.3	1.1	1	0	0	1	1	1	1	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
NanE	PF04131.9	gi|429217565|ref|YP_007175555.1|	-	0.0044	15.9	0.1	0.0065	15.4	0.1	1.3	1	0	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF1512	PF07431.7	gi|429217565|ref|YP_007175555.1|	-	0.035	12.8	4.7	0.019	13.7	1.8	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1512)
DUF2254	PF10011.4	gi|429217565|ref|YP_007175555.1|	-	0.12	10.8	0.3	0.15	10.4	0.2	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
DUF2570	PF10828.3	gi|429217565|ref|YP_007175555.1|	-	0.38	10.3	3.8	0.24	11.0	1.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2570)
DUF4446	PF14584.1	gi|429217565|ref|YP_007175555.1|	-	0.51	10.1	5.5	2.6	7.8	1.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
CTP_synth_N	PF06418.9	gi|429217566|ref|YP_007175556.1|	-	2.9e-125	416.8	0.1	5.1e-125	416.1	0.1	1.4	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|429217566|ref|YP_007175556.1|	-	1.1e-43	148.9	0.0	2.2e-43	147.9	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|429217566|ref|YP_007175556.1|	-	7.1e-10	38.6	0.0	1.7e-09	37.4	0.0	1.6	1	0	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.18	gi|429217566|ref|YP_007175556.1|	-	6.4e-06	25.7	0.0	1e-05	25.0	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|429217566|ref|YP_007175556.1|	-	0.0072	15.4	0.1	0.022	13.7	0.0	1.9	2	0	0	2	2	2	1	Anion-transporting	ATPase
ArgK	PF03308.11	gi|429217566|ref|YP_007175556.1|	-	0.39	9.4	3.4	0.58	8.8	0.1	2.2	2	0	0	2	2	2	0	ArgK	protein
dUTPase	PF00692.14	gi|429217567|ref|YP_007175557.1|	-	4.3e-16	58.5	0.0	6e-16	58.0	0.0	1.2	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|429217567|ref|YP_007175557.1|	-	3.6e-05	22.3	0.0	0.00067	18.1	0.0	2.5	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
Radical_SAM	PF04055.16	gi|429217568|ref|YP_007175558.1|	-	3.5e-25	89.0	0.5	8.3e-25	87.8	0.1	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|429217568|ref|YP_007175558.1|	-	1e-21	76.5	0.0	2.2e-21	75.5	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|429217568|ref|YP_007175558.1|	-	5.8e-12	45.2	0.6	2e-11	43.4	0.1	2.2	2	0	0	2	2	2	1	TRAM	domain
Fer4_14	PF13394.1	gi|429217568|ref|YP_007175558.1|	-	0.09	12.8	0.4	11	6.0	0.0	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
NAD_kinase	PF01513.16	gi|429217569|ref|YP_007175559.1|	-	8.9e-41	139.5	0.7	1.2e-40	139.1	0.5	1.2	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|429217569|ref|YP_007175559.1|	-	0.023	14.1	0.3	0.073	12.5	0.0	1.8	2	0	0	2	2	2	0	Diacylglycerol	kinase	catalytic	domain
PIN_4	PF13638.1	gi|429217570|ref|YP_007175560.1|	-	0.0012	18.9	0.5	0.0015	18.5	0.3	1.1	1	0	0	1	1	1	1	PIN	domain
UPF0278	PF08745.6	gi|429217570|ref|YP_007175560.1|	-	0.004	16.4	0.4	0.019	14.1	0.0	1.8	1	1	0	2	2	2	1	UPF0278	family
Bse634I	PF07832.6	gi|429217570|ref|YP_007175560.1|	-	0.018	14.1	1.0	0.023	13.8	0.7	1.2	1	0	0	1	1	1	0	Cfr10I/Bse634I	restriction	endonuclease
DUF1220	PF06758.8	gi|429217570|ref|YP_007175560.1|	-	0.098	12.4	0.1	0.16	11.7	0.1	1.3	1	0	0	1	1	1	0	Repeat	of	unknown	function	(DUF1220)
Met_10	PF02475.11	gi|429217571|ref|YP_007175561.1|	-	8.3e-47	159.3	1.9	8.3e-47	159.3	1.3	1.7	2	0	0	2	2	2	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|429217571|ref|YP_007175561.1|	-	6e-07	29.5	0.0	9.4e-07	28.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|429217571|ref|YP_007175561.1|	-	8.6e-07	28.6	2.1	2e-06	27.4	0.3	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
PrmA	PF06325.8	gi|429217571|ref|YP_007175561.1|	-	7e-06	25.3	0.8	1.1e-05	24.6	0.5	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_15	PF09445.5	gi|429217571|ref|YP_007175561.1|	-	2.9e-05	23.7	0.2	6.2e-05	22.6	0.1	1.6	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.9	gi|429217571|ref|YP_007175561.1|	-	7.7e-05	22.1	0.1	0.00013	21.4	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|429217571|ref|YP_007175561.1|	-	0.00014	21.5	0.0	0.00038	20.2	0.0	1.6	1	1	1	2	2	2	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|429217571|ref|YP_007175561.1|	-	0.00017	20.8	0.1	0.00031	19.9	0.1	1.4	1	0	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_18	PF12847.2	gi|429217571|ref|YP_007175561.1|	-	0.00038	21.0	0.0	0.00083	19.9	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|429217571|ref|YP_007175561.1|	-	0.00087	18.8	0.2	0.0018	17.7	0.0	1.9	2	1	0	2	2	2	1	DNA	methylase
Cons_hypoth95	PF03602.10	gi|429217571|ref|YP_007175561.1|	-	0.0022	17.4	0.0	0.0039	16.5	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
3H	PF02829.9	gi|429217571|ref|YP_007175561.1|	-	0.016	15.1	1.1	1.7	8.7	0.0	2.9	2	1	1	3	3	3	0	3H	domain
FtsJ	PF01728.14	gi|429217571|ref|YP_007175561.1|	-	0.05	13.5	0.0	0.15	12.0	0.0	1.8	2	1	0	2	2	2	0	FtsJ-like	methyltransferase
Methyltransf_11	PF08241.7	gi|429217571|ref|YP_007175561.1|	-	0.062	13.7	0.0	0.17	12.3	0.0	1.8	1	0	0	1	1	1	0	Methyltransferase	domain
DUF1614	PF07758.6	gi|429217572|ref|YP_007175562.1|	-	1.2e-44	152.1	17.0	1.2e-44	152.1	11.8	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1614)
UPF0104	PF03706.8	gi|429217573|ref|YP_007175563.1|	-	2.9e-19	69.4	18.9	4e-19	68.9	13.1	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
Radical_SAM	PF04055.16	gi|429217574|ref|YP_007175564.1|	-	7.3e-17	62.0	0.0	6.4e-16	58.9	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|429217574|ref|YP_007175564.1|	-	0.00099	18.9	0.1	0.028	14.2	0.0	2.8	3	0	0	3	3	3	1	B12	binding	domain
DUF648	PF04890.8	gi|429217575|ref|YP_007175565.1|	-	0.059	12.5	0.1	0.065	12.4	0.1	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF648)
AAA	PF00004.24	gi|429217576|ref|YP_007175566.1|	-	4.1e-96	318.2	0.0	5.5e-48	162.5	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|429217576|ref|YP_007175566.1|	-	3.7e-31	106.9	0.6	3.4e-30	103.8	1.2	2.1	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|429217576|ref|YP_007175566.1|	-	2e-14	53.2	0.1	1.2e-06	27.8	0.0	3.3	4	0	0	4	4	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|429217576|ref|YP_007175566.1|	-	4.9e-13	49.3	0.9	2.2e-05	24.5	0.1	4.2	2	2	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|429217576|ref|YP_007175566.1|	-	5.2e-13	49.3	0.0	2.6e-05	24.3	0.0	2.9	2	1	0	2	2	2	2	AAA	ATPase	domain
CDC48_2	PF02933.12	gi|429217576|ref|YP_007175566.1|	-	5.7e-13	48.2	4.6	1.6e-12	46.8	1.2	2.9	2	1	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.9	gi|429217576|ref|YP_007175566.1|	-	4.2e-12	46.3	0.0	5.3e-06	26.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_33	PF13671.1	gi|429217576|ref|YP_007175566.1|	-	1.4e-11	44.4	0.0	0.00013	21.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|429217576|ref|YP_007175566.1|	-	7.2e-11	42.9	0.0	0.00046	20.9	0.0	3.1	3	0	0	3	3	2	2	AAA	domain
AAA_14	PF13173.1	gi|429217576|ref|YP_007175566.1|	-	8.3e-11	41.8	0.0	6.7e-05	22.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|429217576|ref|YP_007175566.1|	-	1.2e-10	40.7	0.2	0.00034	19.4	0.0	3.1	3	0	0	3	3	3	2	TIP49	C-terminus
AAA_5	PF07728.9	gi|429217576|ref|YP_007175566.1|	-	4.4e-10	39.4	2.5	0.0012	18.5	0.1	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.7	gi|429217576|ref|YP_007175566.1|	-	5.3e-10	38.7	0.0	0.00024	20.2	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|429217576|ref|YP_007175566.1|	-	6e-09	35.5	0.3	0.0041	16.5	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_28	PF13521.1	gi|429217576|ref|YP_007175566.1|	-	1.8e-07	31.2	0.0	0.019	14.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|429217576|ref|YP_007175566.1|	-	2.3e-07	31.1	0.2	0.024	14.9	0.0	3.3	3	0	0	3	3	2	2	AAA	domain
AAA_19	PF13245.1	gi|429217576|ref|YP_007175566.1|	-	3.2e-07	30.0	3.9	0.013	15.1	0.1	2.9	2	0	0	2	2	2	2	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|429217576|ref|YP_007175566.1|	-	5.7e-07	28.9	0.6	0.033	13.3	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Arch_ATPase	PF01637.13	gi|429217576|ref|YP_007175566.1|	-	1.3e-06	28.3	0.4	0.25	11.0	0.0	4.0	2	2	1	3	3	3	1	Archaeal	ATPase
Sigma54_activ_2	PF14532.1	gi|429217576|ref|YP_007175566.1|	-	2.6e-06	27.5	0.0	0.094	12.7	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Sigma54_activat	PF00158.21	gi|429217576|ref|YP_007175566.1|	-	2.7e-06	26.9	0.0	0.048	13.1	0.0	3.2	2	1	0	2	2	2	2	Sigma-54	interaction	domain
PhoH	PF02562.11	gi|429217576|ref|YP_007175566.1|	-	6.8e-06	25.4	1.0	0.1	11.8	0.1	2.5	2	0	0	2	2	2	2	PhoH-like	protein
RNA_helicase	PF00910.17	gi|429217576|ref|YP_007175566.1|	-	1.3e-05	25.3	0.0	0.33	11.1	0.0	2.9	3	0	0	3	3	2	2	RNA	helicase
AAA_24	PF13479.1	gi|429217576|ref|YP_007175566.1|	-	1.7e-05	24.4	0.2	0.17	11.4	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
KaiC	PF06745.8	gi|429217576|ref|YP_007175566.1|	-	3.6e-05	22.9	1.2	0.6	9.1	0.0	3.5	2	1	1	3	3	3	2	KaiC
ABC_tran	PF00005.22	gi|429217576|ref|YP_007175566.1|	-	3.7e-05	24.0	0.0	0.37	11.0	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
DUF815	PF05673.8	gi|429217576|ref|YP_007175566.1|	-	0.00013	21.0	0.0	0.19	10.6	0.0	2.8	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
AAA_25	PF13481.1	gi|429217576|ref|YP_007175566.1|	-	0.00024	20.5	11.8	0.46	9.8	1.0	4.1	2	2	1	3	3	3	2	AAA	domain
AAA_3	PF07726.6	gi|429217576|ref|YP_007175566.1|	-	0.00029	20.4	0.0	1	9.0	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Parvo_NS1	PF01057.12	gi|429217576|ref|YP_007175566.1|	-	0.00033	19.6	0.1	0.45	9.3	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
ATP-synt_ab	PF00006.20	gi|429217576|ref|YP_007175566.1|	-	0.00095	18.7	0.0	1.1	8.6	0.0	2.4	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NACHT	PF05729.7	gi|429217576|ref|YP_007175566.1|	-	0.002	17.7	2.2	2.5	7.7	0.1	3.4	4	0	0	4	4	4	2	NACHT	domain
DUF2075	PF09848.4	gi|429217576|ref|YP_007175566.1|	-	0.0032	16.5	0.0	1.5	7.7	0.0	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
Vps4_C	PF09336.5	gi|429217576|ref|YP_007175566.1|	-	0.0034	17.2	0.1	0.16	11.8	0.0	3.2	3	0	0	3	3	3	1	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|429217576|ref|YP_007175566.1|	-	0.0036	16.9	0.1	3.6	7.2	0.0	2.7	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
NTPase_1	PF03266.10	gi|429217576|ref|YP_007175566.1|	-	0.0043	16.7	1.1	11	5.7	0.0	3.8	2	1	1	3	3	3	0	NTPase
AAA_11	PF13086.1	gi|429217576|ref|YP_007175566.1|	-	0.0046	16.5	0.0	3.7	7.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|429217576|ref|YP_007175566.1|	-	0.0096	14.8	0.1	3.8	6.2	0.0	2.3	2	0	0	2	2	2	0	NB-ARC	domain
SKI	PF01202.17	gi|429217576|ref|YP_007175566.1|	-	0.012	15.5	0.0	3.1	7.6	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
AFG1_ATPase	PF03969.11	gi|429217576|ref|YP_007175566.1|	-	0.013	14.2	0.0	1.8	7.2	0.0	2.3	2	0	0	2	2	2	0	AFG1-like	ATPase
AAA_29	PF13555.1	gi|429217576|ref|YP_007175566.1|	-	0.023	14.2	0.0	6.9	6.2	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
IPT	PF01745.11	gi|429217576|ref|YP_007175566.1|	-	0.023	13.8	0.1	2.2	7.3	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
T2SE	PF00437.15	gi|429217576|ref|YP_007175566.1|	-	0.039	12.8	0.0	6.6	5.5	0.0	2.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_30	PF13604.1	gi|429217576|ref|YP_007175566.1|	-	0.054	13.0	3.2	6.9	6.1	0.0	3.2	4	0	0	4	4	3	0	AAA	domain
PduV-EutP	PF10662.4	gi|429217576|ref|YP_007175566.1|	-	0.065	12.7	0.0	13	5.2	0.0	2.7	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
ResIII	PF04851.10	gi|429217576|ref|YP_007175566.1|	-	0.081	12.7	0.0	13	5.5	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Miro	PF08477.8	gi|429217576|ref|YP_007175566.1|	-	0.087	13.3	0.0	19	5.7	0.0	3.5	3	0	0	3	3	3	0	Miro-like	protein
Bac_DnaA	PF00308.13	gi|429217576|ref|YP_007175566.1|	-	0.11	12.1	0.0	10	5.6	0.0	2.5	2	1	0	2	2	2	0	Bacterial	dnaA	protein
KTI12	PF08433.5	gi|429217576|ref|YP_007175566.1|	-	0.13	11.4	0.0	15	4.7	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_10	PF12846.2	gi|429217576|ref|YP_007175566.1|	-	0.33	10.3	5.1	8.4	5.7	0.3	3.6	3	1	0	3	3	2	0	AAA-like	domain
HTH_12	PF08461.5	gi|429217577|ref|YP_007175567.1|	-	0.011	15.4	0.1	0.013	15.1	0.1	1.2	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF1456	PF07308.8	gi|429217577|ref|YP_007175567.1|	-	0.024	14.6	0.3	0.27	11.3	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1456)
FUR	PF01475.14	gi|429217577|ref|YP_007175567.1|	-	0.064	13.1	0.1	0.083	12.8	0.0	1.1	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
XPG_I	PF00867.13	gi|429217578|ref|YP_007175568.1|	-	1.9e-26	91.9	0.0	3.7e-26	91.0	0.0	1.5	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|429217578|ref|YP_007175568.1|	-	1.4e-21	76.6	0.0	3.5e-21	75.3	0.0	1.7	2	0	0	2	2	2	1	XPG	N-terminal	domain
PP28	PF10252.4	gi|429217578|ref|YP_007175568.1|	-	0.028	14.4	1.0	0.028	14.4	0.7	2.0	2	0	0	2	2	2	0	Casein	kinase	substrate	phosphoprotein	PP28
DUF3391	PF11871.3	gi|429217578|ref|YP_007175568.1|	-	0.038	14.1	3.2	0.042	14.0	0.8	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3391)
FKBP_N	PF01346.13	gi|429217578|ref|YP_007175568.1|	-	0.057	13.4	3.2	0.1	12.6	0.4	2.6	2	0	0	2	2	2	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
DUF4355	PF14265.1	gi|429217578|ref|YP_007175568.1|	-	1.3	8.9	11.8	8	6.4	3.9	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
Cache_2	PF08269.6	gi|429217578|ref|YP_007175568.1|	-	2.3	8.2	6.1	1.3	9.0	2.0	2.1	2	0	0	2	2	2	0	Cache	domain
DUF1771	PF08590.5	gi|429217578|ref|YP_007175568.1|	-	5.5	7.0	10.1	0.49	10.4	3.5	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1771)
KH_5	PF13184.1	gi|429217579|ref|YP_007175569.1|	-	0.0002	21.1	0.8	0.0029	17.3	0.1	2.6	2	1	0	2	2	2	1	NusA-like	KH	domain
DUF4428	PF14471.1	gi|429217579|ref|YP_007175569.1|	-	0.12	12.1	1.6	0.36	10.5	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
ATP-synt_C	PF00137.16	gi|429217580|ref|YP_007175570.1|	-	1.4e-20	72.8	20.2	1.4e-20	72.8	14.0	2.1	2	0	0	2	2	2	2	ATP	synthase	subunit	C
tRNA-synt_2b	PF00587.20	gi|429217581|ref|YP_007175571.1|	-	7.4e-26	90.7	0.2	5e-25	88.0	0.2	2.1	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|429217581|ref|YP_007175571.1|	-	8.5e-19	67.2	0.5	2.4e-18	65.8	0.1	2.0	2	0	0	2	2	2	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|429217581|ref|YP_007175571.1|	-	1.8e-17	63.0	0.9	4.9e-17	61.6	0.3	1.9	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
Elf1	PF05129.8	gi|429217581|ref|YP_007175571.1|	-	0.018	14.6	0.7	1.8	8.3	0.0	2.4	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
MFS_1	PF07690.11	gi|429217582|ref|YP_007175572.1|	-	8.8e-22	77.2	45.8	8.8e-22	77.2	31.8	1.6	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429217582|ref|YP_007175572.1|	-	2.8e-10	39.3	37.8	2.1e-07	29.9	10.0	2.4	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|429217583|ref|YP_007175573.1|	-	4.6e-14	51.8	46.8	4.6e-14	51.8	32.5	2.2	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|429217583|ref|YP_007175573.1|	-	2.7e-09	36.1	41.0	3.8e-08	32.3	28.4	2.4	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
Methyltransf_11	PF08241.7	gi|429217584|ref|YP_007175574.1|	-	4.9e-15	55.7	0.0	1.1e-14	54.6	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|429217584|ref|YP_007175574.1|	-	3.6e-13	49.1	0.4	4.5e-13	48.8	0.3	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.1	gi|429217584|ref|YP_007175574.1|	-	3.1e-08	33.3	0.3	1.5e-07	31.1	0.1	2.0	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|429217584|ref|YP_007175574.1|	-	5.7e-07	29.3	0.0	8.3e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|429217584|ref|YP_007175574.1|	-	1.8e-06	28.2	0.0	5.7e-06	26.6	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429217584|ref|YP_007175574.1|	-	2.5e-06	28.0	0.0	4.2e-06	27.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|429217584|ref|YP_007175574.1|	-	3e-06	27.6	0.0	1.1e-05	25.8	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
NNMT_PNMT_TEMT	PF01234.12	gi|429217584|ref|YP_007175574.1|	-	0.0022	16.9	0.0	0.2	10.6	0.0	2.2	2	0	0	2	2	2	1	NNMT/PNMT/TEMT	family
Methyltransf_8	PF05148.10	gi|429217584|ref|YP_007175574.1|	-	0.0047	16.5	0.0	0.0077	15.8	0.0	1.5	1	0	0	1	1	1	1	Hypothetical	methyltransferase
polyprenyl_synt	PF00348.12	gi|429217585|ref|YP_007175575.1|	-	4.8e-34	117.3	0.2	6.7e-34	116.9	0.2	1.2	1	0	0	1	1	1	1	Polyprenyl	synthetase
PCMT	PF01135.14	gi|429217586|ref|YP_007175576.1|	-	1.9e-70	236.6	0.1	2.2e-70	236.4	0.1	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|429217586|ref|YP_007175576.1|	-	7.9e-10	38.5	0.0	1.4e-09	37.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|429217586|ref|YP_007175576.1|	-	3.6e-07	29.4	0.0	4.9e-07	29.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_18	PF12847.2	gi|429217586|ref|YP_007175576.1|	-	6.8e-07	29.8	0.0	9.7e-07	29.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|429217586|ref|YP_007175576.1|	-	1.4e-05	24.2	0.0	2.8e-05	23.2	0.0	1.4	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
GCD14	PF08704.5	gi|429217586|ref|YP_007175576.1|	-	9.9e-05	21.9	0.0	0.00014	21.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_26	PF13659.1	gi|429217586|ref|YP_007175576.1|	-	0.00037	20.5	0.0	0.00051	20.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|429217586|ref|YP_007175576.1|	-	0.0006	18.9	0.0	0.00095	18.3	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_24	PF13578.1	gi|429217586|ref|YP_007175576.1|	-	0.0012	19.5	0.0	0.0019	18.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|429217586|ref|YP_007175576.1|	-	0.0014	17.8	0.0	0.0022	17.1	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.9	gi|429217586|ref|YP_007175576.1|	-	0.0024	17.2	0.0	0.0047	16.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_32	PF13679.1	gi|429217586|ref|YP_007175576.1|	-	0.0041	16.8	0.0	0.0061	16.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|429217586|ref|YP_007175576.1|	-	0.0069	15.3	0.0	0.0088	14.9	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_4	PF02390.12	gi|429217586|ref|YP_007175576.1|	-	0.027	13.5	0.0	0.051	12.6	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_16	PF10294.4	gi|429217586|ref|YP_007175576.1|	-	0.07	12.5	0.0	0.098	12.1	0.0	1.2	1	0	0	1	1	1	0	Putative	methyltransferase
DUF3895	PF13034.1	gi|429217586|ref|YP_007175576.1|	-	0.12	11.8	0.7	0.98	8.9	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3895)
GTP_EFTU	PF00009.22	gi|429217587|ref|YP_007175577.1|	-	1.9e-56	190.4	0.1	2.8e-56	189.9	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|429217587|ref|YP_007175577.1|	-	2.2e-34	117.5	0.0	1.7e-33	114.7	0.0	2.6	3	0	0	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|429217587|ref|YP_007175577.1|	-	1.9e-23	82.0	0.5	4.6e-23	80.8	0.0	2.0	2	0	0	2	2	2	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|429217587|ref|YP_007175577.1|	-	1.2e-22	79.5	0.0	8.9e-22	76.7	0.0	2.4	3	0	0	3	3	3	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|429217587|ref|YP_007175577.1|	-	6e-13	48.7	0.2	1.5e-12	47.3	0.1	1.8	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
Ras	PF00071.17	gi|429217587|ref|YP_007175577.1|	-	0.021	14.2	0.0	0.04	13.3	0.0	1.4	1	0	0	1	1	1	0	Ras	family
SRPRB	PF09439.5	gi|429217587|ref|YP_007175577.1|	-	0.022	13.9	0.0	0.059	12.5	0.0	1.7	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
G-alpha	PF00503.15	gi|429217587|ref|YP_007175577.1|	-	0.064	11.9	0.1	0.13	10.9	0.1	1.4	1	0	0	1	1	1	0	G-protein	alpha	subunit
DUF371	PF04027.8	gi|429217589|ref|YP_007175579.1|	-	2e-47	160.1	0.2	2.3e-47	159.9	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
YIEGIA	PF14045.1	gi|429217589|ref|YP_007175579.1|	-	0.077	11.6	0.0	0.26	9.8	0.0	1.8	1	1	1	2	2	2	0	YIEGIA	protein
ERCC4	PF02732.10	gi|429217590|ref|YP_007175580.1|	-	2.9e-26	91.9	0.4	4.2e-26	91.4	0.3	1.2	1	0	0	1	1	1	1	ERCC4	domain
HHH_5	PF14520.1	gi|429217590|ref|YP_007175580.1|	-	4.2e-08	33.2	0.0	9.4e-08	32.1	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|429217590|ref|YP_007175580.1|	-	2e-06	27.6	0.0	6.1e-06	26.0	0.0	1.8	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|429217590|ref|YP_007175580.1|	-	4.1e-05	23.0	0.0	0.018	14.7	0.0	3.3	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.15	gi|429217590|ref|YP_007175580.1|	-	7.5e-05	22.9	0.9	0.00026	21.1	0.1	2.1	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_3	PF12836.2	gi|429217590|ref|YP_007175580.1|	-	0.027	14.4	0.2	0.15	12.0	0.1	2.2	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_8	PF14716.1	gi|429217590|ref|YP_007175580.1|	-	0.034	14.3	0.2	0.69	10.1	0.0	2.5	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
IMS_HHH	PF11798.3	gi|429217590|ref|YP_007175580.1|	-	0.084	12.9	0.0	0.28	11.3	0.0	1.9	1	0	0	1	1	1	0	IMS	family	HHH	motif
DHH	PF01368.15	gi|429217591|ref|YP_007175581.1|	-	4.8e-18	65.2	1.1	4.8e-18	65.2	0.8	1.6	2	0	0	2	2	2	1	DHH	family
DHHA1	PF02272.14	gi|429217591|ref|YP_007175581.1|	-	2.1e-07	30.5	0.6	7e-07	28.8	0.4	1.9	1	0	0	1	1	1	1	DHHA1	domain
Lumazine_bd	PF12870.2	gi|429217591|ref|YP_007175581.1|	-	0.00074	19.5	0.7	0.0041	17.1	0.1	2.5	2	0	0	2	2	2	1	Lumazine-binding	domain
SNAP	PF14938.1	gi|429217591|ref|YP_007175581.1|	-	0.043	12.9	0.0	0.068	12.2	0.0	1.2	1	0	0	1	1	1	0	Soluble	NSF	attachment	protein,	SNAP
Ribosomal_S7	PF00177.16	gi|429217591|ref|YP_007175581.1|	-	0.072	12.6	0.1	0.13	11.7	0.1	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S7p/S5e
Apc3	PF12895.2	gi|429217591|ref|YP_007175581.1|	-	0.44	10.7	2.2	2.8	8.1	0.1	2.7	2	1	0	2	2	2	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
Prefoldin_2	PF01920.15	gi|429217592|ref|YP_007175582.1|	-	2e-21	75.7	10.7	2.3e-21	75.5	7.4	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
DUF3294	PF07957.6	gi|429217592|ref|YP_007175582.1|	-	0.017	14.6	1.7	0.02	14.4	1.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3294)
Exonuc_VII_L	PF02601.10	gi|429217592|ref|YP_007175582.1|	-	0.039	13.1	1.7	0.049	12.8	1.2	1.3	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Baculo_PEP_C	PF04513.7	gi|429217592|ref|YP_007175582.1|	-	0.052	13.3	0.7	0.11	12.3	0.4	1.6	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
FlxA	PF14282.1	gi|429217592|ref|YP_007175582.1|	-	0.078	12.9	8.4	0.08	12.9	4.5	1.8	2	0	0	2	2	2	0	FlxA-like	protein
IFT57	PF10498.4	gi|429217592|ref|YP_007175582.1|	-	0.081	11.6	6.9	0.16	10.6	4.8	1.4	1	1	0	1	1	1	0	Intra-flagellar	transport	protein	57
DUF3316	PF11777.3	gi|429217592|ref|YP_007175582.1|	-	0.13	12.0	0.3	6	6.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3316)
Tropomyosin_1	PF12718.2	gi|429217592|ref|YP_007175582.1|	-	0.15	11.8	7.1	0.51	10.1	2.8	2.0	2	0	0	2	2	2	0	Tropomyosin	like
AAA_13	PF13166.1	gi|429217592|ref|YP_007175582.1|	-	0.37	9.1	3.7	0.46	8.8	2.5	1.2	1	1	0	1	1	1	0	AAA	domain
FbpA	PF05833.6	gi|429217592|ref|YP_007175582.1|	-	1.4	7.4	8.4	4.4	5.7	0.1	2.1	2	0	0	2	2	2	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DivIC	PF04977.10	gi|429217592|ref|YP_007175582.1|	-	1.5	8.3	8.7	0.38	10.2	3.6	1.7	2	0	0	2	2	2	0	Septum	formation	initiator
MSP1_C	PF07462.6	gi|429217592|ref|YP_007175582.1|	-	3.3	5.9	8.7	6.5	5.0	3.6	1.9	1	1	1	2	2	2	0	Merozoite	surface	protein	1	(MSP1)	C-terminus
DUF724	PF05266.9	gi|429217592|ref|YP_007175582.1|	-	7.2	6.1	8.3	14	5.2	5.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Oxidored_q4	PF00507.14	gi|429217593|ref|YP_007175583.1|	-	1.9e-07	30.8	3.7	1.9e-07	30.8	2.5	1.6	1	1	1	2	2	2	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
OAD_gamma	PF04277.8	gi|429217593|ref|YP_007175583.1|	-	0.048	14.0	0.1	0.048	14.0	0.1	2.3	2	1	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
PA14	PF07691.7	gi|429217593|ref|YP_007175583.1|	-	0.15	11.6	0.0	0.2	11.3	0.0	1.1	1	0	0	1	1	1	0	PA14	domain
PgaD	PF13994.1	gi|429217593|ref|YP_007175583.1|	-	0.64	9.5	3.6	3.3	7.1	0.7	2.2	2	0	0	2	2	2	0	PgaD-like	protein
Tic20	PF09685.5	gi|429217593|ref|YP_007175583.1|	-	1.2	9.1	11.0	6.2	6.8	0.3	2.1	2	0	0	2	2	2	0	Tic20-like	protein
OppC_N	PF12911.2	gi|429217593|ref|YP_007175583.1|	-	1.7	8.0	9.8	0.47	9.8	0.8	2.7	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF3708	PF12501.3	gi|429217593|ref|YP_007175583.1|	-	5.7	6.7	8.4	0.87	9.4	1.4	2.2	2	1	0	2	2	2	0	Phosphate	ATP-binding	cassette	transporter
Strabismus	PF06638.6	gi|429217593|ref|YP_007175583.1|	-	5.9	5.0	9.6	6.9	4.8	6.7	1.2	1	1	0	1	1	1	0	Strabismus	protein
BTP	PF05232.7	gi|429217593|ref|YP_007175583.1|	-	6.8	6.5	8.4	0.96	9.2	0.9	2.5	2	0	0	2	2	2	0	Bacterial	Transmembrane	Pair	family
Oxidored_q6	PF01058.17	gi|429217594|ref|YP_007175584.1|	-	4.5e-20	71.6	0.1	8.1e-20	70.7	0.1	1.4	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Complex1_30kDa	PF00329.14	gi|429217595|ref|YP_007175585.1|	-	4.4e-28	97.5	0.0	5.8e-28	97.1	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Pro_3_hydrox_C	PF05373.6	gi|429217595|ref|YP_007175585.1|	-	0.041	13.9	0.2	0.29	11.1	0.0	2.1	1	1	1	2	2	2	0	L-proline	3-hydroxylase,	C-terminal
Complex1_49kDa	PF00346.14	gi|429217596|ref|YP_007175586.1|	-	2.5e-60	203.7	0.0	3.6e-60	203.2	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|429217596|ref|YP_007175586.1|	-	0.18	10.5	0.0	0.53	8.9	0.0	1.7	2	0	0	2	2	2	0	Nickel-dependent	hydrogenase
NADHdh	PF00146.16	gi|429217597|ref|YP_007175587.1|	-	4.3e-55	186.9	19.9	5.5e-55	186.6	13.8	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Fer4	PF00037.22	gi|429217598|ref|YP_007175588.1|	-	1.1e-15	56.4	12.7	1.2e-09	37.3	2.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|429217598|ref|YP_007175588.1|	-	2.7e-15	55.9	15.5	4.2e-11	42.4	5.4	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|429217598|ref|YP_007175588.1|	-	5.9e-12	44.9	12.5	1e-06	28.3	2.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|429217598|ref|YP_007175588.1|	-	8.5e-11	42.0	7.3	2e-10	40.9	5.1	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|429217598|ref|YP_007175588.1|	-	4e-10	39.8	8.4	9.2e-10	38.6	5.8	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|429217598|ref|YP_007175588.1|	-	7.6e-10	38.1	13.7	1.8e-05	24.3	1.9	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|429217598|ref|YP_007175588.1|	-	3.4e-09	36.2	12.2	8.6e-05	22.5	1.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|429217598|ref|YP_007175588.1|	-	4.7e-09	36.1	15.8	3.2e-06	27.0	6.5	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|429217598|ref|YP_007175588.1|	-	1.4e-08	35.3	17.5	6.5e-07	30.0	6.1	2.5	2	1	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|429217598|ref|YP_007175588.1|	-	6.2e-08	32.3	19.9	7.7e-07	28.8	6.6	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|429217598|ref|YP_007175588.1|	-	2.8e-07	30.7	2.5	0.0044	17.3	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|429217598|ref|YP_007175588.1|	-	8.4e-06	26.2	5.7	0.025	15.1	0.2	2.6	3	0	0	3	3	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|429217598|ref|YP_007175588.1|	-	1.4e-05	25.4	5.5	0.021	15.2	0.4	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|429217598|ref|YP_007175588.1|	-	8.7e-05	22.7	16.4	0.00089	19.6	3.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|429217598|ref|YP_007175588.1|	-	0.015	15.6	13.8	0.23	11.8	0.2	2.8	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|429217598|ref|YP_007175588.1|	-	0.045	13.6	4.9	0.69	9.8	2.3	2.6	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|429217598|ref|YP_007175588.1|	-	2.6	7.6	8.7	2.3	7.8	0.4	2.1	1	1	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Oxidored_q3	PF00499.15	gi|429217599|ref|YP_007175589.1|	-	3.1e-08	33.5	20.8	3.8e-08	33.2	14.4	1.1	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
7TMR-DISM_7TM	PF07695.6	gi|429217599|ref|YP_007175589.1|	-	0.83	9.2	19.3	1.3	8.5	13.4	1.4	1	1	0	1	1	1	0	7TM	diverse	intracellular	signalling
DUF3464	PF11947.3	gi|429217599|ref|YP_007175589.1|	-	3	7.2	5.9	6.4	6.2	4.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3464)
Oxidored_q2	PF00420.19	gi|429217600|ref|YP_007175590.1|	-	1.1e-10	40.9	11.1	1.3e-10	40.6	7.7	1.1	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
MerC	PF03203.9	gi|429217600|ref|YP_007175590.1|	-	0.55	10.6	6.1	0.75	10.1	4.2	1.3	1	0	0	1	1	1	0	MerC	mercury	resistance	protein
DUF2207	PF09972.4	gi|429217600|ref|YP_007175590.1|	-	0.59	8.6	6.0	0.68	8.4	4.2	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF2108	PF09881.4	gi|429217600|ref|YP_007175590.1|	-	2.4	8.0	14.0	14	5.5	9.7	1.9	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2108)
DUF1700	PF08006.6	gi|429217600|ref|YP_007175590.1|	-	3.7	6.8	14.1	4.4	6.5	9.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
DUF4491	PF14898.1	gi|429217600|ref|YP_007175590.1|	-	9.4	6.4	11.2	8	6.6	6.9	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4491)
Oxidored_q1	PF00361.15	gi|429217601|ref|YP_007175591.1|	-	5.7e-62	209.4	30.2	5.7e-62	209.4	21.0	2.9	3	2	1	4	4	4	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|429217601|ref|YP_007175591.1|	-	0.015	14.8	0.5	0.015	14.8	0.3	2.7	2	0	0	2	2	2	0	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
TMEM171	PF15471.1	gi|429217601|ref|YP_007175591.1|	-	0.11	11.3	0.2	0.24	10.1	0.2	1.5	1	0	0	1	1	1	0	Transmembrane	protein	family	171
Oxidored_q1	PF00361.15	gi|429217602|ref|YP_007175592.1|	-	4e-48	164.0	32.0	6.5e-45	153.4	19.0	5.7	4	2	0	4	4	4	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|429217602|ref|YP_007175592.1|	-	6.5e-08	32.0	2.5	6.5e-08	32.0	1.7	4.0	6	0	0	6	6	6	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q1	PF00361.15	gi|429217603|ref|YP_007175593.1|	-	6.5e-32	110.8	27.4	6.5e-32	110.8	19.0	2.7	3	0	0	3	3	3	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
RHH_1	PF01402.16	gi|429217604|ref|YP_007175594.1|	-	5.7e-09	35.4	0.5	7.7e-09	35.0	0.3	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|429217604|ref|YP_007175594.1|	-	4.1e-08	32.8	3.4	5.2e-08	32.4	2.4	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
Fe_hyd_SSU	PF02256.12	gi|429217604|ref|YP_007175594.1|	-	0.14	12.1	0.3	0.16	12.0	0.2	1.3	1	1	0	1	1	1	0	Iron	hydrogenase	small	subunit
SBP_bac_11	PF13531.1	gi|429217605|ref|YP_007175595.1|	-	8.5e-27	94.2	0.1	1.2e-26	93.8	0.1	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
BPD_transp_1	PF00528.17	gi|429217606|ref|YP_007175596.1|	-	2.5e-20	72.7	16.2	2.5e-20	72.7	11.2	2.1	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|429217607|ref|YP_007175597.1|	-	9.7e-34	116.6	0.0	1.8e-33	115.7	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217607|ref|YP_007175597.1|	-	4.6e-12	46.4	4.1	4.6e-12	46.4	2.8	3.3	1	1	0	2	2	1	1	AAA	domain
SMC_N	PF02463.14	gi|429217607|ref|YP_007175597.1|	-	2.6e-06	26.8	1.5	1.3e-05	24.5	1.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
cobW	PF02492.14	gi|429217607|ref|YP_007175597.1|	-	0.00017	21.1	0.2	0.0012	18.3	0.1	2.3	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
T2SE	PF00437.15	gi|429217607|ref|YP_007175597.1|	-	0.00017	20.5	0.0	0.00039	19.4	0.0	1.7	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|429217607|ref|YP_007175597.1|	-	0.00066	19.1	0.2	0.0028	17.1	0.1	1.8	1	1	1	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|429217607|ref|YP_007175597.1|	-	0.00096	18.6	0.0	0.0017	17.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|429217607|ref|YP_007175597.1|	-	0.0017	18.7	13.4	0.0089	16.3	9.3	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|429217607|ref|YP_007175597.1|	-	0.0036	17.4	2.4	0.04	14.0	1.6	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|429217607|ref|YP_007175597.1|	-	0.0039	16.9	0.0	0.014	15.1	0.0	1.9	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|429217607|ref|YP_007175597.1|	-	0.0049	16.7	0.6	0.0049	16.7	0.5	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|429217607|ref|YP_007175597.1|	-	0.0072	16.0	0.2	0.17	11.5	0.1	2.5	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DUF3584	PF12128.3	gi|429217607|ref|YP_007175597.1|	-	0.0073	13.7	0.1	0.012	12.9	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
Arch_ATPase	PF01637.13	gi|429217607|ref|YP_007175597.1|	-	0.0076	15.9	4.2	0.016	14.9	2.3	2.0	1	1	0	1	1	1	1	Archaeal	ATPase
NACHT	PF05729.7	gi|429217607|ref|YP_007175597.1|	-	0.0079	15.8	0.7	0.02	14.5	0.0	1.9	2	0	0	2	2	2	1	NACHT	domain
DUF3490	PF11995.3	gi|429217607|ref|YP_007175597.1|	-	0.011	15.3	0.4	0.025	14.1	0.3	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3490)
AAA_11	PF13086.1	gi|429217607|ref|YP_007175597.1|	-	0.015	14.9	0.2	0.022	14.3	0.1	1.3	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|429217607|ref|YP_007175597.1|	-	0.037	14.2	1.5	0.59	10.3	0.8	2.5	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MutS_V	PF00488.16	gi|429217607|ref|YP_007175597.1|	-	0.038	13.3	0.0	0.064	12.6	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	V
AAA_24	PF13479.1	gi|429217607|ref|YP_007175597.1|	-	0.078	12.5	0.3	0.37	10.3	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|429217607|ref|YP_007175597.1|	-	0.082	12.8	0.0	0.23	11.4	0.0	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.1	gi|429217607|ref|YP_007175597.1|	-	0.096	12.5	0.1	0.17	11.7	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|429217607|ref|YP_007175597.1|	-	0.1	12.0	0.0	0.22	10.9	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_17	PF13207.1	gi|429217607|ref|YP_007175597.1|	-	0.1	13.4	5.3	0.18	12.6	1.1	2.7	1	1	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|429217607|ref|YP_007175597.1|	-	0.11	11.1	0.0	0.17	10.4	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF2262	PF10020.4	gi|429217608|ref|YP_007175598.1|	-	0.052	13.7	2.1	0.079	13.1	1.5	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2262)
FbpA	PF05833.6	gi|429217609|ref|YP_007175599.1|	-	3.7e-33	114.7	19.2	4.8e-33	114.3	13.3	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|429217609|ref|YP_007175599.1|	-	5.5e-26	90.2	0.1	1.5e-25	88.8	0.1	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
CCDC155	PF14662.1	gi|429217609|ref|YP_007175599.1|	-	0.15	11.6	13.1	0.88	9.1	9.1	2.0	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
HSBP1	PF06825.7	gi|429217609|ref|YP_007175599.1|	-	0.29	10.7	5.1	0.13	11.8	1.4	2.1	2	0	0	2	2	2	0	Heat	shock	factor	binding	protein	1
DUF1610	PF07754.6	gi|429217610|ref|YP_007175600.1|	-	3e-18	65.5	18.4	7.8e-12	45.0	3.1	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
zf-ribbon_3	PF13248.1	gi|429217610|ref|YP_007175600.1|	-	1.4e-06	27.2	13.7	0.0001	21.3	1.6	3.2	3	1	0	3	3	3	2	zinc-ribbon	domain
zf-B_box	PF00643.19	gi|429217610|ref|YP_007175600.1|	-	0.00012	21.8	8.3	0.072	13.0	0.7	2.5	2	1	0	2	2	2	2	B-box	zinc	finger
DZR	PF12773.2	gi|429217610|ref|YP_007175600.1|	-	0.00022	21.0	12.4	0.0038	17.0	9.0	2.3	1	1	1	2	2	2	2	Double	zinc	ribbon
PolC_DP2	PF03833.8	gi|429217610|ref|YP_007175600.1|	-	0.00098	16.9	3.9	0.0011	16.7	2.7	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
DUF1272	PF06906.6	gi|429217610|ref|YP_007175600.1|	-	0.0011	18.7	9.2	0.033	14.0	0.9	2.5	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF1272)
zf-C2HC5	PF06221.8	gi|429217610|ref|YP_007175600.1|	-	0.0026	17.4	11.1	0.0046	16.6	2.0	2.2	1	1	1	2	2	2	1	Putative	zinc	finger	motif,	C2HC5-type
OrfB_Zn_ribbon	PF07282.6	gi|429217610|ref|YP_007175600.1|	-	0.0038	16.8	11.4	0.017	14.7	0.6	2.4	1	1	2	3	3	3	1	Putative	transposase	DNA-binding	domain
Nudix_N_2	PF14803.1	gi|429217610|ref|YP_007175600.1|	-	0.0039	16.8	11.8	0.52	10.0	4.6	3.6	2	1	0	2	2	2	1	Nudix	N-terminal
DUF35_N	PF12172.3	gi|429217610|ref|YP_007175600.1|	-	0.0062	16.4	11.7	0.024	14.5	0.5	3.5	1	1	1	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_2	PF13240.1	gi|429217610|ref|YP_007175600.1|	-	0.01	15.3	22.1	0.012	15.0	3.3	3.7	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-MYND	PF01753.13	gi|429217610|ref|YP_007175600.1|	-	0.017	14.9	8.1	0.56	10.1	0.1	2.2	1	1	0	2	2	2	0	MYND	finger
C1_1	PF00130.17	gi|429217610|ref|YP_007175600.1|	-	0.021	14.5	0.5	0.021	14.5	0.3	2.4	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
NinF	PF05810.7	gi|429217610|ref|YP_007175600.1|	-	0.031	14.0	4.7	0.15	11.8	0.1	2.3	1	1	1	2	2	2	0	NinF	protein
IBR	PF01485.16	gi|429217610|ref|YP_007175600.1|	-	0.045	13.6	10.3	1.3	8.9	7.8	2.1	1	1	0	1	1	1	0	IBR	domain
DUF2296	PF10058.4	gi|429217610|ref|YP_007175600.1|	-	0.057	13.1	17.4	0.71	9.6	0.3	3.8	1	1	2	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DUF2072	PF09845.4	gi|429217610|ref|YP_007175600.1|	-	0.08	12.8	1.1	0.08	12.8	0.8	2.1	1	1	1	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
zf-H2C2_2	PF13465.1	gi|429217610|ref|YP_007175600.1|	-	0.082	13.2	0.4	0.082	13.2	0.3	3.8	2	2	2	4	4	4	0	Zinc-finger	double	domain
ADK_lid	PF05191.9	gi|429217610|ref|YP_007175600.1|	-	0.11	12.2	10.4	1.1	8.9	2.3	3.4	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-RING_5	PF14634.1	gi|429217610|ref|YP_007175600.1|	-	0.11	12.2	12.7	1.9	8.3	9.2	2.3	1	1	1	2	2	2	0	zinc-RING	finger	domain
DUF2321	PF10083.4	gi|429217610|ref|YP_007175600.1|	-	0.15	11.5	5.9	0.46	9.9	4.1	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
HypA	PF01155.14	gi|429217610|ref|YP_007175600.1|	-	0.15	11.7	9.5	0.16	11.6	2.7	2.2	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
Sgf11	PF08209.6	gi|429217610|ref|YP_007175600.1|	-	0.18	11.1	13.4	0.45	9.8	0.0	3.9	4	0	0	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
DUF2310	PF10071.4	gi|429217610|ref|YP_007175600.1|	-	0.24	10.3	2.0	0.29	10.0	1.4	1.1	1	0	0	1	1	1	0	Zn-ribbon-containing,	possibly	nucleic-acid-binding	protein	(DUF2310)
A2L_zn_ribbon	PF08792.5	gi|429217610|ref|YP_007175600.1|	-	0.29	10.6	16.2	1.6	8.3	3.8	3.9	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
tRNA-synt_1f	PF01921.13	gi|429217610|ref|YP_007175600.1|	-	0.33	9.5	1.5	0.68	8.5	1.0	1.6	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(K)
Lar_restr_allev	PF14354.1	gi|429217610|ref|YP_007175600.1|	-	0.4	11.0	9.8	0.14	12.4	3.4	2.0	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Tnp_zf-ribbon_2	PF13842.1	gi|429217610|ref|YP_007175600.1|	-	0.59	10.5	13.9	1.2	9.6	1.1	2.6	1	1	1	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
zf-AN1	PF01428.11	gi|429217610|ref|YP_007175600.1|	-	0.64	9.9	13.1	2.8	7.9	2.8	2.8	2	1	1	3	3	3	0	AN1-like	Zinc	finger
Auto_anti-p27	PF06677.7	gi|429217610|ref|YP_007175600.1|	-	0.65	9.8	13.1	0.14	11.8	1.0	2.9	2	1	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-C3HC4_4	PF15227.1	gi|429217610|ref|YP_007175600.1|	-	0.85	9.5	9.2	1.9	8.4	0.8	2.3	2	0	0	2	2	2	0	zinc	finger	of	C3HC4-type,	RING
zf-Mss51	PF13824.1	gi|429217610|ref|YP_007175600.1|	-	0.95	9.3	12.4	3.4	7.5	2.0	2.6	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zinc_ribbon_4	PF13717.1	gi|429217610|ref|YP_007175600.1|	-	1	9.0	19.3	9.5	6.0	0.3	4.0	2	1	1	3	3	3	0	zinc-ribbon	domain
C1_3	PF07649.7	gi|429217610|ref|YP_007175600.1|	-	1	9.4	11.0	0.4	10.7	1.0	2.8	2	1	0	2	2	2	0	C1-like	domain
PhnA_Zn_Ribbon	PF08274.7	gi|429217610|ref|YP_007175600.1|	-	1.1	9.1	8.7	21	5.0	0.2	3.7	4	0	0	4	4	4	0	PhnA	Zinc-Ribbon
NOB1_Zn_bind	PF08772.6	gi|429217610|ref|YP_007175600.1|	-	1.2	9.0	12.7	0.37	10.6	4.0	2.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
UPF0547	PF10571.4	gi|429217610|ref|YP_007175600.1|	-	1.2	8.9	16.6	1.7	8.3	2.7	3.3	2	1	1	3	3	3	0	Uncharacterised	protein	family	UPF0547
Spt4	PF06093.8	gi|429217610|ref|YP_007175600.1|	-	1.2	9.0	9.0	3.6	7.5	2.4	2.2	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
zf-C2H2	PF00096.21	gi|429217610|ref|YP_007175600.1|	-	1.3	9.4	16.4	6.9	7.2	0.2	4.1	4	0	0	4	4	4	0	Zinc	finger,	C2H2	type
zf-CHY	PF05495.7	gi|429217610|ref|YP_007175600.1|	-	1.5	9.0	9.7	10	6.3	6.7	2.1	1	1	0	1	1	1	0	CHY	zinc	finger
zf-UBP	PF02148.14	gi|429217610|ref|YP_007175600.1|	-	1.5	8.9	7.3	1.7	8.8	0.4	2.6	1	1	2	3	3	3	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
TF_Zn_Ribbon	PF08271.7	gi|429217610|ref|YP_007175600.1|	-	1.6	8.0	19.0	2.7	7.3	1.0	3.6	3	1	0	3	3	3	0	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|429217610|ref|YP_007175600.1|	-	1.6	8.5	21.1	22	4.9	0.1	3.9	2	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|429217610|ref|YP_007175600.1|	-	1.8	8.1	19.6	9	5.9	0.3	4.0	2	1	1	3	3	3	0	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|429217610|ref|YP_007175600.1|	-	2.1	8.1	11.7	6.6	6.5	4.1	2.7	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
DUF329	PF03884.9	gi|429217610|ref|YP_007175600.1|	-	2.4	7.7	12.9	8.9	5.9	2.4	3.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF329)
XPA_N	PF01286.13	gi|429217610|ref|YP_007175600.1|	-	3	7.6	0.0	3	7.6	0.0	3.6	3	1	0	4	4	4	0	XPA	protein	N-terminal
zf-RING_2	PF13639.1	gi|429217610|ref|YP_007175600.1|	-	3.7	7.4	12.0	56	3.6	8.3	2.4	1	1	0	1	1	1	0	Ring	finger	domain
Ribosomal_L37ae	PF01780.14	gi|429217610|ref|YP_007175600.1|	-	3.7	7.4	11.8	6.1	6.7	0.2	2.9	1	1	2	3	3	3	0	Ribosomal	L37ae	protein	family
zf-C2H2_jaz	PF12171.3	gi|429217610|ref|YP_007175600.1|	-	3.8	7.7	6.3	4	7.7	0.1	3.1	3	0	0	3	3	3	0	Zinc-finger	double-stranded	RNA-binding
Rubredoxin	PF00301.15	gi|429217610|ref|YP_007175600.1|	-	3.9	7.4	16.7	8.1	6.4	0.3	4.0	2	2	1	3	3	3	0	Rubredoxin
Rpr2	PF04032.11	gi|429217610|ref|YP_007175600.1|	-	4.1	7.3	9.2	15	5.5	6.4	1.9	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-UBR	PF02207.15	gi|429217610|ref|YP_007175600.1|	-	4.6	7.0	10.5	24	4.7	5.9	2.3	1	1	1	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
zinc-ribbons_6	PF07191.7	gi|429217610|ref|YP_007175600.1|	-	5.3	6.8	10.8	4.3	7.1	4.9	2.1	1	1	1	2	2	2	0	zinc-ribbons
zf-LITAF-like	PF10601.4	gi|429217610|ref|YP_007175600.1|	-	6.1	6.7	13.4	3.5	7.5	1.1	3.4	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
Elf1	PF05129.8	gi|429217610|ref|YP_007175600.1|	-	6.5	6.5	9.1	19	5.0	6.3	2.0	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DUF164	PF02591.10	gi|429217610|ref|YP_007175600.1|	-	6.8	6.6	13.1	22	4.9	1.8	3.4	2	2	1	3	3	3	0	Putative	zinc	ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|429217610|ref|YP_007175600.1|	-	7.7	6.1	16.0	2	7.9	1.8	3.4	1	1	3	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-C2H2_4	PF13894.1	gi|429217610|ref|YP_007175600.1|	-	9	6.8	16.5	18	5.9	0.4	4.0	4	0	0	4	4	4	0	C2H2-type	zinc	finger
Mut7-C	PF01927.11	gi|429217610|ref|YP_007175600.1|	-	9.1	6.2	6.4	16	5.4	4.4	1.6	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
zf-HIT	PF04438.11	gi|429217610|ref|YP_007175600.1|	-	9.3	5.9	21.0	4.6	6.9	5.9	3.3	1	1	2	3	3	3	0	HIT	zinc	finger
TerY-C	PF15616.1	gi|429217610|ref|YP_007175600.1|	-	9.8	6.1	11.9	57	3.6	8.2	2.0	1	1	0	1	1	1	0	TerY-C	metal	binding	domain
EF1_GNE	PF00736.14	gi|429217611|ref|YP_007175601.1|	-	9.8e-22	76.4	0.7	1.1e-21	76.3	0.5	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
P2	PF07194.6	gi|429217611|ref|YP_007175601.1|	-	0.033	14.0	1.2	0.086	12.7	0.7	1.8	1	1	0	1	1	1	0	P2	response	regulator	binding	domain
SNARE_assoc	PF09335.6	gi|429217612|ref|YP_007175602.1|	-	1.8e-07	31.3	9.0	1.8e-07	31.3	6.2	2.1	2	1	0	2	2	2	1	SNARE	associated	Golgi	protein
CitMHS	PF03600.11	gi|429217612|ref|YP_007175602.1|	-	0.35	9.4	14.4	2.3	6.7	9.9	1.9	1	1	0	1	1	1	0	Citrate	transporter
Lactamase_B_2	PF12706.2	gi|429217613|ref|YP_007175603.1|	-	1.7e-22	79.9	0.0	2.2e-22	79.5	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|429217613|ref|YP_007175603.1|	-	3.7e-14	52.8	0.2	5e-11	42.6	0.0	2.2	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|429217613|ref|YP_007175603.1|	-	0.0032	17.1	0.2	0.011	15.4	0.1	1.8	2	1	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_4	PF13691.1	gi|429217613|ref|YP_007175603.1|	-	0.011	15.1	0.0	0.025	14.0	0.0	1.5	1	0	0	1	1	1	0	tRNase	Z	endonuclease
DNA_ligase_A_M	PF01068.16	gi|429217614|ref|YP_007175604.1|	-	1.7e-56	190.7	0.8	2.7e-56	190.1	0.5	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|429217614|ref|YP_007175604.1|	-	1.5e-51	174.7	0.0	2.4e-51	174.0	0.0	1.3	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|429217614|ref|YP_007175604.1|	-	1.5e-24	86.1	0.0	4.3e-24	84.7	0.0	1.8	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
Rpr2	PF04032.11	gi|429217615|ref|YP_007175605.1|	-	4.5e-19	68.1	1.0	5.8e-19	67.7	0.7	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DUF164	PF02591.10	gi|429217615|ref|YP_007175605.1|	-	0.0049	16.6	0.4	0.009	15.8	0.3	1.4	1	0	0	1	1	1	1	Putative	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|429217615|ref|YP_007175605.1|	-	0.026	13.9	3.6	0.52	9.8	0.3	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_6	PF14599.1	gi|429217615|ref|YP_007175605.1|	-	0.026	14.3	1.3	0.081	12.7	0.2	2.0	2	0	0	2	2	2	0	Zinc-ribbon
NMD3	PF04981.8	gi|429217615|ref|YP_007175605.1|	-	0.043	12.9	1.4	0.045	12.8	0.3	1.6	1	1	0	1	1	1	0	NMD3	family
zf-C2H2_3	PF13878.1	gi|429217615|ref|YP_007175605.1|	-	0.11	12.0	0.4	16	5.1	0.0	2.3	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Nudix_N_2	PF14803.1	gi|429217615|ref|YP_007175605.1|	-	0.28	10.9	2.1	7.3	6.3	0.1	2.5	2	1	0	2	2	2	0	Nudix	N-terminal
UPF0020	PF01170.13	gi|429217616|ref|YP_007175606.1|	-	4e-30	104.7	0.0	6e-30	104.1	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|429217616|ref|YP_007175606.1|	-	1.5e-10	41.1	0.0	2.2e-10	40.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|429217616|ref|YP_007175606.1|	-	1.5e-10	40.7	0.0	2.4e-10	40.1	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
N6_N4_Mtase	PF01555.13	gi|429217616|ref|YP_007175606.1|	-	0.00013	21.5	0.0	0.0074	15.7	0.0	2.2	2	0	0	2	2	2	1	DNA	methylase
MTS	PF05175.9	gi|429217616|ref|YP_007175606.1|	-	0.00019	20.8	0.0	0.0004	19.8	0.0	1.5	1	1	1	2	2	2	1	Methyltransferase	small	domain
MethyltransfD12	PF02086.10	gi|429217616|ref|YP_007175606.1|	-	0.00098	18.6	0.2	0.082	12.3	0.0	2.7	2	1	1	3	3	3	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_11	PF08241.7	gi|429217616|ref|YP_007175606.1|	-	0.0019	18.6	0.0	0.013	15.9	0.0	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|429217616|ref|YP_007175606.1|	-	0.0056	16.2	0.0	0.011	15.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|429217616|ref|YP_007175606.1|	-	0.026	14.0	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.8	gi|429217616|ref|YP_007175606.1|	-	0.034	13.2	0.0	0.063	12.3	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
N6_Mtase	PF02384.11	gi|429217616|ref|YP_007175606.1|	-	0.065	12.3	0.0	0.12	11.4	0.0	1.4	1	1	0	1	1	1	0	N-6	DNA	Methylase
DUF302	PF03625.9	gi|429217617|ref|YP_007175607.1|	-	5.1e-15	54.7	0.0	7.6e-15	54.2	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF302
His_Phos_1	PF00300.17	gi|429217618|ref|YP_007175608.1|	-	9.5e-49	165.5	0.0	1.1e-48	165.3	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
RNA_binding	PF01877.12	gi|429217619|ref|YP_007175609.1|	-	2e-27	95.5	0.1	2.3e-27	95.3	0.1	1.1	1	0	0	1	1	1	1	RNA	binding
AAA_18	PF13238.1	gi|429217620|ref|YP_007175610.1|	-	7.7e-21	74.7	0.6	1.2e-20	74.1	0.4	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|429217620|ref|YP_007175610.1|	-	1.3e-15	58.3	0.1	1.5e-15	58.0	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|429217620|ref|YP_007175610.1|	-	4.3e-06	26.7	0.4	7.6e-06	25.9	0.3	1.7	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
ADK	PF00406.17	gi|429217620|ref|YP_007175610.1|	-	2.1e-05	24.4	0.0	3.1e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Adenylate	kinase
AAA_33	PF13671.1	gi|429217620|ref|YP_007175610.1|	-	3.3e-05	23.7	0.0	5e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|429217620|ref|YP_007175610.1|	-	0.00011	22.3	0.0	0.00019	21.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|429217620|ref|YP_007175610.1|	-	0.00015	21.6	0.9	0.00028	20.8	0.6	1.7	1	1	0	1	1	1	1	AAA	domain
6PF2K	PF01591.13	gi|429217620|ref|YP_007175610.1|	-	0.0002	20.5	0.1	0.00033	19.8	0.1	1.4	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
APS_kinase	PF01583.15	gi|429217620|ref|YP_007175610.1|	-	0.00047	19.8	0.1	0.03	14.0	0.0	2.3	2	0	0	2	2	2	1	Adenylylsulphate	kinase
Torsin	PF06309.6	gi|429217620|ref|YP_007175610.1|	-	0.0012	18.7	0.1	0.0037	17.1	0.0	1.8	1	1	1	2	2	2	1	Torsin
KTI12	PF08433.5	gi|429217620|ref|YP_007175610.1|	-	0.0012	18.1	0.3	0.0057	15.8	0.2	2.1	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
CbiA	PF01656.18	gi|429217620|ref|YP_007175610.1|	-	0.0014	18.1	0.7	0.0024	17.3	0.4	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NTPase_1	PF03266.10	gi|429217620|ref|YP_007175610.1|	-	0.0015	18.2	0.4	0.0041	16.8	0.3	1.8	1	1	0	1	1	1	1	NTPase
KAP_NTPase	PF07693.9	gi|429217620|ref|YP_007175610.1|	-	0.0023	17.0	0.1	0.0024	16.9	0.1	1.2	1	0	0	1	1	1	1	KAP	family	P-loop	domain
Zeta_toxin	PF06414.7	gi|429217620|ref|YP_007175610.1|	-	0.0024	16.9	0.1	0.0058	15.7	0.1	1.6	1	1	0	1	1	1	1	Zeta	toxin
SKI	PF01202.17	gi|429217620|ref|YP_007175610.1|	-	0.003	17.4	0.4	0.0056	16.5	0.3	1.7	1	1	0	1	1	1	1	Shikimate	kinase
CoaE	PF01121.15	gi|429217620|ref|YP_007175610.1|	-	0.011	15.1	0.1	0.07	12.5	0.0	2.0	1	1	1	2	2	2	0	Dephospho-CoA	kinase
Viral_helicase1	PF01443.13	gi|429217620|ref|YP_007175610.1|	-	0.011	15.2	0.0	0.017	14.6	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
DUF87	PF01935.12	gi|429217620|ref|YP_007175610.1|	-	0.018	14.8	1.7	0.16	11.7	0.1	2.4	1	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA	PF00004.24	gi|429217620|ref|YP_007175610.1|	-	0.02	15.0	0.6	0.056	13.6	0.2	2.0	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|429217620|ref|YP_007175610.1|	-	0.02	14.4	0.0	0.03	13.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|429217620|ref|YP_007175610.1|	-	0.026	14.5	0.0	0.042	13.7	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
SdrG_C_C	PF10425.4	gi|429217620|ref|YP_007175610.1|	-	0.04	13.8	0.4	0.65	9.9	0.1	2.1	2	0	0	2	2	2	0	C-terminus	of	bacterial	fibrinogen-binding	adhesin
cobW	PF02492.14	gi|429217620|ref|YP_007175610.1|	-	0.056	12.8	1.4	0.83	9.0	1.0	2.2	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Sigma54_activ_2	PF14532.1	gi|429217620|ref|YP_007175610.1|	-	0.058	13.4	0.0	0.15	12.1	0.0	1.8	1	1	0	1	1	1	0	Sigma-54	interaction	domain
NB-ARC	PF00931.17	gi|429217620|ref|YP_007175610.1|	-	0.06	12.2	0.1	0.093	11.5	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
SRP54	PF00448.17	gi|429217620|ref|YP_007175610.1|	-	0.065	12.6	0.0	0.093	12.1	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|429217620|ref|YP_007175610.1|	-	0.07	11.8	2.0	0.38	9.5	0.1	2.5	2	1	1	3	3	3	0	ArgK	protein
ABC_tran	PF00005.22	gi|429217620|ref|YP_007175610.1|	-	0.079	13.2	0.5	0.088	13.1	0.3	1.4	1	1	0	1	1	1	0	ABC	transporter
AAA_16	PF13191.1	gi|429217620|ref|YP_007175610.1|	-	0.096	12.6	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Phage_tail	PF04630.7	gi|429217620|ref|YP_007175610.1|	-	0.11	11.6	0.0	0.17	10.9	0.0	1.3	1	0	0	1	1	1	0	Phage	major	tail	protein
AAA_30	PF13604.1	gi|429217620|ref|YP_007175610.1|	-	0.14	11.6	0.0	0.3	10.6	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|429217620|ref|YP_007175610.1|	-	0.16	11.0	1.4	8.6	5.3	1.0	2.4	1	1	0	1	1	1	0	KaiC
Adenosine_kin	PF04008.9	gi|429217621|ref|YP_007175611.1|	-	8.9e-66	220.1	0.0	1e-65	219.9	0.0	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
SPA	PF08616.5	gi|429217621|ref|YP_007175611.1|	-	0.0019	17.8	0.1	0.0031	17.2	0.1	1.2	1	0	0	1	1	1	1	Stabilization	of	polarity	axis
DUF2226	PF09987.4	gi|429217621|ref|YP_007175611.1|	-	0.11	11.6	0.6	1	8.3	0.5	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
CTP_transf_2	PF01467.21	gi|429217622|ref|YP_007175612.1|	-	2.6e-13	50.3	0.0	4.3e-13	49.5	0.0	1.4	1	0	0	1	1	1	1	Cytidylyltransferase
HIGH_NTase1	PF05636.6	gi|429217622|ref|YP_007175612.1|	-	0.0037	16.3	0.0	0.15	11.0	0.0	2.1	2	0	0	2	2	2	2	HIGH	Nucleotidyl	Transferase
Nol1_Nop2_Fmu	PF01189.12	gi|429217623|ref|YP_007175613.1|	-	7.2e-54	183.0	0.0	8.5e-54	182.8	0.0	1.0	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|429217623|ref|YP_007175613.1|	-	2.8e-07	30.2	0.4	1.5e-06	27.9	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|429217623|ref|YP_007175613.1|	-	0.00048	19.5	0.0	0.00073	18.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
FtsJ	PF01728.14	gi|429217623|ref|YP_007175613.1|	-	0.0031	17.5	0.0	0.015	15.2	0.0	2.0	1	1	0	2	2	2	1	FtsJ-like	methyltransferase
UPF0113	PF03657.8	gi|429217624|ref|YP_007175614.1|	-	1.2e-28	99.8	0.9	1.3e-28	99.6	0.6	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Nol1_Nop2_Fmu_2	PF13636.1	gi|429217624|ref|YP_007175614.1|	-	0.0023	17.9	0.0	0.0043	17.1	0.0	1.5	1	0	0	1	1	1	1	pre-rRNA	processing	and	ribosome	biogenesis
FKBP_C	PF00254.23	gi|429217625|ref|YP_007175615.1|	-	4.3e-12	45.8	0.4	1e-11	44.6	0.2	1.7	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
RasGAP	PF00616.14	gi|429217625|ref|YP_007175615.1|	-	0.055	13.1	6.9	1.8	8.1	2.3	2.2	2	0	0	2	2	2	0	GTPase-activator	protein	for	Ras-like	GTPase
Metallophos_2	PF12850.2	gi|429217626|ref|YP_007175616.1|	-	5.8e-09	35.9	0.0	9e-09	35.3	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|429217626|ref|YP_007175616.1|	-	9.1e-08	31.7	0.2	1.5e-07	31.0	0.1	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
CppA_N	PF14506.1	gi|429217626|ref|YP_007175616.1|	-	0.0059	16.2	0.2	0.037	13.6	0.0	2.0	1	1	0	2	2	2	1	CppA	N-terminal
MGDG_synth	PF06925.6	gi|429217626|ref|YP_007175616.1|	-	0.061	13.2	0.1	0.13	12.1	0.1	1.6	1	1	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
UPF0047	PF01894.12	gi|429217627|ref|YP_007175617.1|	-	3.8e-37	126.6	0.0	4.4e-37	126.4	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
APG9	PF04109.11	gi|429217627|ref|YP_007175617.1|	-	0.031	13.2	0.6	0.037	12.9	0.4	1.1	1	0	0	1	1	1	0	Autophagy	protein	Apg9
Helicase_C_2	PF13307.1	gi|429217628|ref|YP_007175618.1|	-	4.2e-25	88.6	0.0	8.5e-25	87.6	0.0	1.5	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD_2	PF06733.10	gi|429217628|ref|YP_007175618.1|	-	3.9e-20	71.9	0.6	8.2e-20	70.9	0.4	1.6	1	0	0	1	1	1	1	DEAD_2
ResIII	PF04851.10	gi|429217628|ref|YP_007175618.1|	-	4.5e-09	36.3	1.3	4.7e-07	29.8	0.1	3.2	2	1	1	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|429217628|ref|YP_007175618.1|	-	7.8e-06	25.4	0.0	0.0014	18.1	0.1	3.2	2	2	0	2	2	2	1	DEAD/DEAH	box	helicase
AAA_19	PF13245.1	gi|429217628|ref|YP_007175618.1|	-	0.016	14.9	0.0	0.034	13.8	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_22	PF13401.1	gi|429217628|ref|YP_007175618.1|	-	0.031	14.4	0.1	1.9	8.6	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
Metallophos_2	PF12850.2	gi|429217629|ref|YP_007175619.1|	-	1.1e-15	57.8	0.0	1.4e-15	57.4	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|429217629|ref|YP_007175619.1|	-	6.3e-09	35.3	0.0	5.4e-07	29.0	0.0	2.1	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Metallophos	PF00149.23	gi|429217629|ref|YP_007175619.1|	-	2e-07	30.5	1.0	0.0043	16.4	0.2	2.4	2	1	0	2	2	2	2	Calcineurin-like	phosphoesterase
Hydrolase_like2	PF13246.1	gi|429217629|ref|YP_007175619.1|	-	0.035	14.0	0.0	0.061	13.2	0.0	1.5	1	1	0	1	1	1	0	Putative	hydrolase	of	sodium-potassium	ATPase	alpha	subunit
DnaB	PF00772.16	gi|429217629|ref|YP_007175619.1|	-	0.099	12.5	0.1	1.5	8.7	0.0	2.1	2	0	0	2	2	2	0	DnaB-like	helicase	N	terminal	domain
DUF763	PF05559.6	gi|429217630|ref|YP_007175620.1|	-	1.7e-101	339.4	0.0	1.9e-101	339.1	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
Pox_polyA_pol_N	PF12630.2	gi|429217630|ref|YP_007175620.1|	-	0.059	13.4	2.3	0.065	13.3	0.2	2.0	2	0	0	2	2	2	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
DUF4010	PF13194.1	gi|429217631|ref|YP_007175621.1|	-	4.7e-25	88.1	21.1	4.7e-25	88.1	14.6	2.2	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4010)
MgtC	PF02308.11	gi|429217631|ref|YP_007175621.1|	-	5.6e-05	23.0	9.3	5.6e-05	23.0	6.5	3.7	2	1	1	3	3	3	2	MgtC	family
ABC2_membrane	PF01061.19	gi|429217632|ref|YP_007175622.1|	-	4.4e-11	42.3	29.3	8.8e-11	41.3	20.3	1.5	1	0	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|429217632|ref|YP_007175622.1|	-	4.7e-05	22.5	39.7	6.6e-05	22.0	27.4	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|429217633|ref|YP_007175623.1|	-	1e-26	93.8	0.0	2e-26	92.8	0.0	1.5	2	0	0	2	2	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217633|ref|YP_007175623.1|	-	4.1e-18	66.3	2.8	8.7e-16	58.7	1.9	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|429217633|ref|YP_007175623.1|	-	1.2e-08	34.4	1.0	0.0035	16.4	0.2	2.3	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|429217633|ref|YP_007175623.1|	-	1.1e-05	24.8	0.1	2.3e-05	23.8	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|429217633|ref|YP_007175623.1|	-	0.00039	20.8	0.7	0.00083	19.7	0.5	1.6	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|429217633|ref|YP_007175623.1|	-	0.0027	16.9	0.2	0.16	11.1	0.0	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
MMR_HSR1	PF01926.18	gi|429217633|ref|YP_007175623.1|	-	0.0074	16.2	0.0	0.032	14.1	0.0	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
DUF258	PF03193.11	gi|429217633|ref|YP_007175623.1|	-	0.0074	15.4	0.1	0.014	14.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|429217633|ref|YP_007175623.1|	-	0.015	16.0	0.1	0.041	14.7	0.1	1.7	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|429217633|ref|YP_007175623.1|	-	0.042	14.0	0.5	0.17	12.0	0.1	2.2	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|429217633|ref|YP_007175623.1|	-	0.053	13.0	1.4	0.22	11.0	0.4	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|429217633|ref|YP_007175623.1|	-	0.062	13.2	0.4	0.1	12.5	0.3	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|429217633|ref|YP_007175623.1|	-	0.067	12.8	0.1	0.13	12.0	0.1	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|429217633|ref|YP_007175623.1|	-	0.092	12.6	0.0	0.21	11.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|429217633|ref|YP_007175623.1|	-	0.094	12.1	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|429217633|ref|YP_007175623.1|	-	0.097	12.1	0.2	0.21	11.0	0.2	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Mg_chelatase	PF01078.16	gi|429217633|ref|YP_007175623.1|	-	0.11	11.6	0.0	0.22	10.6	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|429217633|ref|YP_007175623.1|	-	0.12	12.6	0.6	0.34	11.2	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|429217633|ref|YP_007175623.1|	-	0.12	11.7	0.1	5	6.4	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|429217633|ref|YP_007175623.1|	-	0.13	12.0	0.1	0.26	11.0	0.1	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_5	PF07728.9	gi|429217633|ref|YP_007175623.1|	-	0.14	11.8	0.0	0.34	10.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_ATPase	PF09818.4	gi|429217633|ref|YP_007175623.1|	-	0.15	10.6	0.2	0.24	9.9	0.1	1.2	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
B12-binding	PF02310.14	gi|429217634|ref|YP_007175624.1|	-	0.1	12.5	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	B12	binding	domain
zinc_ribbon_2	PF13240.1	gi|429217635|ref|YP_007175625.1|	-	4.2e-05	22.8	0.9	5.7e-05	22.4	0.6	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
Ribosomal_L40e	PF01020.12	gi|429217635|ref|YP_007175625.1|	-	6.3e-05	22.4	3.2	8.3e-05	22.1	2.2	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
DZR	PF12773.2	gi|429217635|ref|YP_007175625.1|	-	0.0016	18.1	1.3	0.002	17.8	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|429217635|ref|YP_007175625.1|	-	0.0024	17.0	1.8	0.0037	16.4	1.3	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|429217635|ref|YP_007175625.1|	-	0.0029	16.6	1.6	0.0037	16.3	1.1	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DnaJ_CXXCXGXG	PF00684.14	gi|429217635|ref|YP_007175625.1|	-	0.0059	16.6	0.4	0.0064	16.5	0.3	1.2	1	0	0	1	1	1	1	DnaJ	central	domain
zf-TFIIB	PF13453.1	gi|429217635|ref|YP_007175625.1|	-	0.046	12.9	0.1	2	7.6	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-FPG_IleRS	PF06827.9	gi|429217635|ref|YP_007175625.1|	-	0.085	12.5	7.0	0.12	12.0	0.6	2.2	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
HypA	PF01155.14	gi|429217635|ref|YP_007175625.1|	-	0.11	12.1	0.5	0.13	11.9	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Methyltransf_13	PF08421.6	gi|429217635|ref|YP_007175625.1|	-	0.26	10.8	1.4	8.4	5.9	0.0	2.1	1	1	1	2	2	2	0	Putative	zinc	binding	domain
DNA_RNApol_7kD	PF03604.8	gi|429217635|ref|YP_007175625.1|	-	0.32	10.5	5.5	0.56	9.7	3.8	1.4	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
UPF0547	PF10571.4	gi|429217635|ref|YP_007175625.1|	-	0.33	10.7	3.1	0.71	9.6	2.1	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
RNA_POL_M_15KD	PF02150.11	gi|429217635|ref|YP_007175625.1|	-	4.9	6.9	6.0	1	9.1	0.1	2.1	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
DUF1464	PF07318.7	gi|429217636|ref|YP_007175626.1|	-	2.7e-106	355.2	0.3	3.3e-106	354.9	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
DUF1896	PF08989.5	gi|429217636|ref|YP_007175626.1|	-	0.075	12.9	0.0	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1896)
Imm48	PF15587.1	gi|429217636|ref|YP_007175626.1|	-	0.12	11.7	2.6	0.16	11.3	0.2	2.3	2	1	1	3	3	3	0	Immunity	protein	48
DUF605	PF04652.11	gi|429217637|ref|YP_007175627.1|	-	0.039	13.3	0.2	0.049	13.0	0.1	1.3	1	1	0	1	1	1	0	Vta1	like
FlaC_arch	PF05377.6	gi|429217637|ref|YP_007175627.1|	-	2.4	8.1	6.1	20	5.1	0.0	4.0	3	2	1	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
Translin	PF01997.11	gi|429217638|ref|YP_007175628.1|	-	1.2e-38	132.7	0.0	1.6e-38	132.3	0.0	1.2	1	0	0	1	1	1	1	Translin	family
DegS	PF05384.6	gi|429217638|ref|YP_007175628.1|	-	0.0035	16.5	0.2	0.0083	15.3	0.1	1.7	1	0	0	1	1	1	1	Sensor	protein	DegS
TPR_8	PF13181.1	gi|429217638|ref|YP_007175628.1|	-	0.028	14.1	0.7	1.7	8.5	0.0	3.7	3	1	1	4	4	4	0	Tetratricopeptide	repeat
Syntaxin_2	PF14523.1	gi|429217638|ref|YP_007175628.1|	-	0.32	11.0	2.1	11	6.0	0.3	2.6	2	1	0	2	2	2	0	Syntaxin-like	protein
GHMP_kinases_C	PF08544.8	gi|429217639|ref|YP_007175629.1|	-	4.9e-07	29.8	0.0	9.3e-07	28.9	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|429217639|ref|YP_007175629.1|	-	0.00013	21.9	0.0	0.00023	21.1	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
Vac_Fusion	PF02346.11	gi|429217639|ref|YP_007175629.1|	-	0.012	15.0	0.0	0.033	13.6	0.0	1.8	1	0	0	1	1	1	0	Chordopoxvirus	fusion	protein
Ribosomal_S26e	PF01283.14	gi|429217640|ref|YP_007175630.1|	-	4.7e-32	110.6	0.8	5.1e-32	110.4	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
DZR	PF12773.2	gi|429217640|ref|YP_007175630.1|	-	0.033	14.0	0.9	0.17	11.7	0.1	2.0	2	0	0	2	2	2	0	Double	zinc	ribbon
zf-C2HC_2	PF13913.1	gi|429217640|ref|YP_007175630.1|	-	0.035	13.7	0.2	0.14	11.8	0.0	2.0	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-dskA_traR	PF01258.12	gi|429217640|ref|YP_007175630.1|	-	0.057	13.1	4.1	0.47	10.2	0.1	2.3	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Tat	PF00539.13	gi|429217640|ref|YP_007175630.1|	-	0.08	12.5	1.1	0.13	11.8	0.0	1.9	2	0	0	2	2	2	0	Transactivating	regulatory	protein	(Tat)
DUF164	PF02591.10	gi|429217640|ref|YP_007175630.1|	-	0.095	12.5	1.4	0.3	10.9	0.1	2.2	2	1	0	2	2	2	0	Putative	zinc	ribbon	domain
PRP21_like_P	PF12230.3	gi|429217640|ref|YP_007175630.1|	-	0.12	11.8	0.1	0.16	11.4	0.0	1.2	1	0	0	1	1	1	0	Pre-mRNA	splicing	factor	PRP21	like	protein
Sgf11	PF08209.6	gi|429217640|ref|YP_007175630.1|	-	0.13	11.6	0.1	0.13	11.6	0.1	1.7	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Ribosomal_L18ae	PF01775.12	gi|429217641|ref|YP_007175631.1|	-	1.4e-10	41.1	1.0	2.5e-10	40.2	0.7	1.4	1	1	0	1	1	1	1	Ribosomal	L18ae/LX	protein	domain
Borrelia_orfD	PF02999.9	gi|429217641|ref|YP_007175631.1|	-	0.0065	16.5	0.1	0.0085	16.1	0.1	1.3	1	1	0	1	1	1	1	Borrelia	orf-D	family
Prefoldin	PF02996.12	gi|429217642|ref|YP_007175632.1|	-	1.4e-12	47.3	1.9	2.2e-12	46.7	1.3	1.2	1	0	0	1	1	1	1	Prefoldin	subunit
ATP-synt_B	PF00430.13	gi|429217642|ref|YP_007175632.1|	-	0.0055	16.5	4.0	0.0055	16.5	2.8	1.7	2	0	0	2	2	2	1	ATP	synthase	B/B'	CF(0)
FRG1	PF06229.7	gi|429217642|ref|YP_007175632.1|	-	0.014	14.8	0.1	0.018	14.5	0.1	1.1	1	0	0	1	1	1	0	FRG1-like	family
F420_ligase	PF01996.11	gi|429217642|ref|YP_007175632.1|	-	0.022	13.8	0.0	0.036	13.1	0.0	1.3	1	1	0	1	1	1	0	F420-0:Gamma-glutamyl	ligase
vATP-synt_E	PF01991.13	gi|429217642|ref|YP_007175632.1|	-	0.024	13.9	3.7	0.044	13.0	2.5	1.4	1	0	0	1	1	1	0	ATP	synthase	(E/31	kDa)	subunit
TMF_DNA_bd	PF12329.3	gi|429217642|ref|YP_007175632.1|	-	0.037	13.8	6.2	0.037	13.8	4.3	1.9	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
CofC	PF01983.11	gi|429217642|ref|YP_007175632.1|	-	0.05	12.5	0.4	0.083	11.8	0.2	1.5	1	1	0	1	1	1	0	Guanylyl	transferase	CofC	like
AAA_23	PF13476.1	gi|429217642|ref|YP_007175632.1|	-	0.067	13.5	6.4	0.093	13.0	4.5	1.2	1	0	0	1	1	1	0	AAA	domain
DUF4416	PF14385.1	gi|429217642|ref|YP_007175632.1|	-	0.08	12.6	0.0	0.15	11.7	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4416)
Sec34	PF04136.10	gi|429217642|ref|YP_007175632.1|	-	0.09	12.4	5.7	0.089	12.4	1.8	2.0	2	0	0	2	2	2	0	Sec34-like	family
STAT_alpha	PF01017.15	gi|429217642|ref|YP_007175632.1|	-	0.14	11.8	7.4	0.25	11.0	3.7	2.0	2	0	0	2	2	2	0	STAT	protein,	all-alpha	domain
COG2	PF06148.6	gi|429217642|ref|YP_007175632.1|	-	0.32	10.8	4.9	2.2	8.1	1.1	2.1	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Tropomyosin_1	PF12718.2	gi|429217642|ref|YP_007175632.1|	-	0.35	10.6	9.0	0.28	11.0	5.3	1.5	2	0	0	2	2	2	0	Tropomyosin	like
Laminin_II	PF06009.7	gi|429217642|ref|YP_007175632.1|	-	0.39	10.4	8.4	0.41	10.3	2.2	2.1	2	0	0	2	2	2	0	Laminin	Domain	II
BLOC1_2	PF10046.4	gi|429217642|ref|YP_007175632.1|	-	0.45	10.6	9.9	4.7	7.4	3.2	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
YlbD_coat	PF14071.1	gi|429217642|ref|YP_007175632.1|	-	0.71	9.9	9.0	4.9	7.2	2.3	2.1	2	0	0	2	2	2	0	Putative	coat	protein
Matrilin_ccoil	PF10393.4	gi|429217642|ref|YP_007175632.1|	-	0.76	9.1	4.4	0.44	9.9	0.2	2.6	2	1	1	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Fib_alpha	PF08702.5	gi|429217642|ref|YP_007175632.1|	-	1.1	9.3	9.3	0.36	10.9	2.8	2.1	2	1	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Syntaxin_2	PF14523.1	gi|429217642|ref|YP_007175632.1|	-	1.2	9.1	10.9	8.9	6.4	4.0	2.2	2	0	0	2	2	2	0	Syntaxin-like	protein
TPR_MLP1_2	PF07926.7	gi|429217642|ref|YP_007175632.1|	-	1.3	8.7	12.7	2.1	8.1	6.2	2.0	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
Viral_P18	PF04521.8	gi|429217642|ref|YP_007175632.1|	-	3.6	7.0	5.7	6.3	6.2	1.8	2.3	2	1	0	2	2	2	0	ssRNA	positive	strand	viral	18kD	cysteine	rich	protein
RBD-FIP	PF09457.5	gi|429217642|ref|YP_007175632.1|	-	5.3	6.9	8.3	17	5.2	0.1	2.6	2	1	0	2	2	2	0	FIP	domain
FlaC_arch	PF05377.6	gi|429217642|ref|YP_007175632.1|	-	5.8	6.8	6.7	12	5.8	0.1	2.4	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
SRP54	PF00448.17	gi|429217643|ref|YP_007175633.1|	-	1e-70	237.2	0.5	1.5e-70	236.6	0.4	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|429217643|ref|YP_007175633.1|	-	5.2e-13	48.8	7.2	5.2e-13	48.8	5.0	2.0	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
cobW	PF02492.14	gi|429217643|ref|YP_007175633.1|	-	0.00015	21.2	2.3	0.00015	21.2	1.6	2.3	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
ArgK	PF03308.11	gi|429217643|ref|YP_007175633.1|	-	0.00029	19.7	0.1	0.0048	15.6	0.1	2.3	1	1	0	1	1	1	1	ArgK	protein
MobB	PF03205.9	gi|429217643|ref|YP_007175633.1|	-	0.00034	20.3	1.0	0.0007	19.3	0.1	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Arch_ATPase	PF01637.13	gi|429217643|ref|YP_007175633.1|	-	0.001	18.8	0.1	0.001	18.8	0.1	2.3	1	1	1	2	2	2	1	Archaeal	ATPase
MMR_HSR1	PF01926.18	gi|429217643|ref|YP_007175633.1|	-	0.0049	16.8	0.8	0.012	15.5	0.5	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_22	PF13401.1	gi|429217643|ref|YP_007175633.1|	-	0.0051	16.9	0.0	0.017	15.2	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|429217643|ref|YP_007175633.1|	-	0.0058	15.5	0.6	0.017	13.9	0.1	2.0	1	1	1	2	2	2	1	NB-ARC	domain
AAA_30	PF13604.1	gi|429217643|ref|YP_007175633.1|	-	0.008	15.7	0.1	0.017	14.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|429217643|ref|YP_007175633.1|	-	0.01	15.5	1.7	0.041	13.5	0.3	2.5	2	1	1	3	3	3	0	NTPase
Thymidylate_kin	PF02223.12	gi|429217643|ref|YP_007175633.1|	-	0.016	14.5	0.3	0.064	12.6	0.0	2.1	3	0	0	3	3	3	0	Thymidylate	kinase
Zeta_toxin	PF06414.7	gi|429217643|ref|YP_007175633.1|	-	0.024	13.7	0.0	0.046	12.8	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
KTI12	PF08433.5	gi|429217643|ref|YP_007175633.1|	-	0.028	13.6	0.2	0.091	11.9	0.0	1.8	1	1	1	2	2	2	0	Chromatin	associated	protein	KTI12
ABC_tran	PF00005.22	gi|429217643|ref|YP_007175633.1|	-	0.039	14.2	1.2	0.082	13.2	0.1	2.0	1	1	1	2	2	2	0	ABC	transporter
AAA	PF00004.24	gi|429217643|ref|YP_007175633.1|	-	0.045	13.9	0.1	0.13	12.4	0.1	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_31	PF13614.1	gi|429217643|ref|YP_007175633.1|	-	0.046	13.6	1.4	13	5.7	0.0	3.6	4	0	0	4	4	4	0	AAA	domain
DUF258	PF03193.11	gi|429217643|ref|YP_007175633.1|	-	0.046	12.9	0.1	0.097	11.8	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|429217643|ref|YP_007175633.1|	-	0.062	13.2	0.0	0.2	11.5	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
Herpes_UL6	PF01763.11	gi|429217643|ref|YP_007175633.1|	-	0.072	11.2	2.6	0.098	10.8	1.8	1.1	1	0	0	1	1	1	0	Herpesvirus	UL6	like
APS_kinase	PF01583.15	gi|429217643|ref|YP_007175633.1|	-	0.074	12.6	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_33	PF13671.1	gi|429217643|ref|YP_007175633.1|	-	0.089	12.6	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AIRC	PF00731.15	gi|429217643|ref|YP_007175633.1|	-	0.1	11.8	0.2	2.3	7.4	0.0	2.2	2	0	0	2	2	2	0	AIR	carboxylase
Ras	PF00071.17	gi|429217643|ref|YP_007175633.1|	-	0.15	11.4	4.6	7.5	5.9	0.0	2.8	3	0	0	3	3	3	0	Ras	family
AAA_17	PF13207.1	gi|429217643|ref|YP_007175633.1|	-	0.43	11.4	3.2	1.2	9.9	0.2	2.6	2	1	0	2	2	2	0	AAA	domain
DUF1002	PF06207.6	gi|429217643|ref|YP_007175633.1|	-	0.62	9.3	7.6	1.6	7.9	5.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1002)
ATP_bind_1	PF03029.12	gi|429217643|ref|YP_007175633.1|	-	0.91	9.0	4.2	1.1	8.7	0.1	2.5	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
Drf_FH3	PF06367.11	gi|429217643|ref|YP_007175633.1|	-	2.3	7.5	8.0	8.1	5.7	5.6	1.9	1	1	0	1	1	1	0	Diaphanous	FH3	Domain
CBS	PF00571.23	gi|429217644|ref|YP_007175634.1|	-	1.2e-55	185.0	3.6	4.6e-16	58.3	0.0	4.1	4	0	0	4	4	4	4	CBS	domain
GAF_2	PF13185.1	gi|429217644|ref|YP_007175634.1|	-	0.0045	17.4	0.0	2.9	8.3	0.0	2.4	2	0	0	2	2	2	2	GAF	domain
Taq-exonuc	PF09281.5	gi|429217644|ref|YP_007175634.1|	-	0.091	12.8	0.0	0.2	11.7	0.0	1.5	1	0	0	1	1	1	0	Taq	polymerase,	exonuclease
CBS	PF00571.23	gi|429217645|ref|YP_007175635.1|	-	9.9e-54	178.8	4.7	2e-12	46.6	0.0	4.1	4	0	0	4	4	4	4	CBS	domain
RNA_pol_Rpb2_2	PF04561.9	gi|429217645|ref|YP_007175635.1|	-	0.036	13.4	2.6	0.053	12.9	0.5	2.3	2	1	0	2	2	2	0	RNA	polymerase	Rpb2,	domain	2
Peptidase_S51	PF03575.12	gi|429217645|ref|YP_007175635.1|	-	0.094	12.4	0.3	0.24	11.1	0.0	1.9	2	0	0	2	2	2	0	Peptidase	family	S51
EF-hand_like	PF09279.6	gi|429217645|ref|YP_007175635.1|	-	0.095	12.7	0.0	0.8	9.7	0.0	2.5	2	1	1	3	3	3	0	Phosphoinositide-specific	phospholipase	C,	efhand-like
CBS	PF00571.23	gi|429217646|ref|YP_007175636.1|	-	8.8e-39	131.0	0.5	3.4e-13	49.1	0.0	4.1	4	0	0	4	4	4	4	CBS	domain
AdoMet_Synthase	PF01941.14	gi|429217647|ref|YP_007175637.1|	-	3e-170	565.9	3.2	3.4e-170	565.7	2.2	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
DUF460	PF04312.8	gi|429217648|ref|YP_007175638.1|	-	6.6e-44	148.7	0.1	2.4e-43	146.9	0.0	2.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
Syntaxin-6_N	PF09177.6	gi|429217648|ref|YP_007175638.1|	-	0.97	9.8	15.3	6.1	7.3	1.8	3.4	2	1	1	3	3	3	0	Syntaxin	6,	N-terminal
Cep57_CLD_2	PF14197.1	gi|429217648|ref|YP_007175638.1|	-	1.5	8.8	13.1	0.73	9.8	6.1	2.6	1	1	1	2	2	2	0	Centrosome	localisation	domain	of	PPC89
Uds1	PF15456.1	gi|429217648|ref|YP_007175638.1|	-	1.7	8.6	9.6	13	5.8	1.5	2.7	1	1	1	2	2	2	0	Up-regulated	During	Septation
Tropomyosin_1	PF12718.2	gi|429217648|ref|YP_007175638.1|	-	3.4	7.4	22.2	1.1	9.1	12.4	2.3	1	1	1	2	2	2	0	Tropomyosin	like
RIO1	PF01163.17	gi|429217649|ref|YP_007175639.1|	-	4.6e-42	143.5	0.2	6.3e-42	143.0	0.2	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.6	gi|429217649|ref|YP_007175639.1|	-	2.2e-17	62.8	0.0	6.9e-17	61.2	0.0	1.8	1	0	0	1	1	1	1	Rio2,	N-terminal
Pkinase	PF00069.20	gi|429217649|ref|YP_007175639.1|	-	1e-09	37.9	0.2	1.5e-09	37.3	0.2	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Kdo	PF06293.9	gi|429217649|ref|YP_007175639.1|	-	3.1e-07	29.6	0.0	4.8e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|429217649|ref|YP_007175639.1|	-	4.6e-06	26.5	0.0	7.9e-05	22.5	0.0	2.1	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
WaaY	PF06176.6	gi|429217649|ref|YP_007175639.1|	-	0.0028	16.8	0.4	0.036	13.2	0.1	2.2	2	0	0	2	2	2	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
TrmB	PF01978.14	gi|429217649|ref|YP_007175639.1|	-	0.022	14.4	0.0	0.066	12.9	0.0	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Ubiq-assoc	PF09145.5	gi|429217649|ref|YP_007175639.1|	-	0.052	13.4	0.1	0.16	11.8	0.0	1.8	1	0	0	1	1	1	0	Ubiquitin-associated
HTH_20	PF12840.2	gi|429217650|ref|YP_007175640.1|	-	4.6e-10	39.1	0.1	6.8e-10	38.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|429217650|ref|YP_007175640.1|	-	1.8e-08	33.9	0.1	2.6e-08	33.3	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|429217650|ref|YP_007175640.1|	-	5.5e-06	25.6	0.3	8.8e-06	25.0	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|429217650|ref|YP_007175640.1|	-	2.3e-05	23.9	0.0	4.1e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|429217650|ref|YP_007175640.1|	-	0.00046	20.1	0.0	0.00067	19.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|429217650|ref|YP_007175640.1|	-	0.0042	16.7	0.1	0.0063	16.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|429217650|ref|YP_007175640.1|	-	0.0047	17.2	0.0	0.0092	16.2	0.0	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|429217650|ref|YP_007175640.1|	-	0.0052	16.4	0.2	0.009	15.7	0.1	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|429217650|ref|YP_007175640.1|	-	0.02	14.8	0.1	0.097	12.6	0.0	2.1	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_AsnC-type	PF13404.1	gi|429217650|ref|YP_007175640.1|	-	0.07	12.6	0.1	0.14	11.7	0.1	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Ribosomal_S13	PF00416.17	gi|429217650|ref|YP_007175640.1|	-	0.079	13.4	0.1	0.094	13.1	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	S13/S18
GTP-bdg_N	PF13167.1	gi|429217650|ref|YP_007175640.1|	-	0.089	12.9	0.2	0.13	12.3	0.1	1.2	1	0	0	1	1	1	0	GTP-binding	GTPase	N-terminal
AAA_assoc_C	PF09821.4	gi|429217651|ref|YP_007175641.1|	-	1.5e-14	54.3	0.5	3.3e-14	53.1	0.2	1.6	2	0	0	2	2	2	1	C-terminal	AAA-associated	domain
Cas_Csx8	PF09657.5	gi|429217651|ref|YP_007175641.1|	-	0.02	13.6	4.2	0.026	13.2	2.9	1.0	1	0	0	1	1	1	0	CRISPR-associated	protein	Csx8	(Cas_Csx8)
DrsE_2	PF13686.1	gi|429217652|ref|YP_007175642.1|	-	6.1e-23	81.2	1.1	3.1e-22	78.9	0.8	1.8	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|429217652|ref|YP_007175642.1|	-	0.00022	21.2	0.0	0.00037	20.5	0.0	1.4	1	1	0	1	1	1	1	DsrE/DsrF-like	family
Anti-adapt_IraP	PF10796.4	gi|429217652|ref|YP_007175642.1|	-	0.092	13.1	0.0	0.14	12.5	0.0	1.3	1	0	0	1	1	1	0	Sigma-S	stabilisation	anti-adaptor	protein
TusA	PF01206.12	gi|429217653|ref|YP_007175643.1|	-	8e-19	67.0	0.0	9.4e-19	66.7	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF3006	PF11213.3	gi|429217653|ref|YP_007175643.1|	-	0.07	12.8	0.0	0.11	12.2	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
Pyr_redox_2	PF07992.9	gi|429217654|ref|YP_007175644.1|	-	2.6e-08	33.9	0.0	5e-08	33.0	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|429217654|ref|YP_007175644.1|	-	0.00061	20.1	0.0	0.82	10.1	0.0	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
RBD	PF02196.10	gi|429217654|ref|YP_007175644.1|	-	0.0021	17.8	0.0	0.013	15.2	0.0	2.2	2	0	0	2	2	2	1	Raf-like	Ras-binding	domain
NAD_binding_7	PF13241.1	gi|429217654|ref|YP_007175644.1|	-	0.014	15.6	0.0	0.051	13.8	0.0	2.0	1	1	0	1	1	1	0	Putative	NAD(P)-binding
FAD_binding_3	PF01494.14	gi|429217654|ref|YP_007175644.1|	-	0.048	12.7	0.0	0.26	10.3	0.0	2.0	2	0	0	2	2	2	0	FAD	binding	domain
DUF1641	PF07849.6	gi|429217655|ref|YP_007175645.1|	-	8.8e-10	38.0	0.9	2.5e-09	36.5	0.1	2.2	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1641)
T4_Gp59_C	PF08994.5	gi|429217655|ref|YP_007175645.1|	-	0.026	14.6	1.0	0.36	11.0	0.3	2.2	1	1	1	2	2	2	0	T4	gene	Gp59	loader	of	gp41	DNA	helicase	C-term
Methyltransf_31	PF13847.1	gi|429217655|ref|YP_007175645.1|	-	0.043	13.3	0.1	0.047	13.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
HEAT_2	PF13646.1	gi|429217655|ref|YP_007175645.1|	-	0.086	13.1	0.8	2.4	8.4	0.5	2.2	1	1	0	1	1	1	0	HEAT	repeats
Latarcin	PF10279.4	gi|429217655|ref|YP_007175645.1|	-	0.19	11.9	3.2	0.3	11.2	2.2	1.3	1	0	0	1	1	1	0	Latarcin	precursor
Rota_NSP4	PF01452.11	gi|429217655|ref|YP_007175645.1|	-	0.76	9.0	3.7	1.5	8.1	2.5	1.6	1	1	0	1	1	1	0	Rotavirus	non	structural	protein
Pyr_redox_2	PF07992.9	gi|429217656|ref|YP_007175646.1|	-	5.3e-07	29.7	0.0	8.7e-07	29.0	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|429217656|ref|YP_007175646.1|	-	0.0031	16.1	0.0	0.0056	15.3	0.0	1.4	1	0	0	1	1	1	1	Tryptophan	halogenase
Pyr_redox	PF00070.22	gi|429217656|ref|YP_007175646.1|	-	0.064	13.6	2.4	0.15	12.4	0.0	2.5	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|429217656|ref|YP_007175646.1|	-	0.13	11.1	0.3	41	2.9	0.1	3.2	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
DUF1641	PF07849.6	gi|429217657|ref|YP_007175647.1|	-	1.2e-13	50.4	0.9	1.2e-13	50.4	0.7	2.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1641)
RNA_pol_Rpb5_C	PF01191.14	gi|429217658|ref|YP_007175648.1|	-	6.6e-27	92.9	0.0	8.1e-27	92.6	0.0	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
RNA_pol_Rpb2_6	PF00562.23	gi|429217659|ref|YP_007175649.1|	-	2.9e-122	408.1	0.0	4.1e-122	407.6	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|429217659|ref|YP_007175649.1|	-	3.2e-56	189.4	0.1	5.2e-56	188.7	0.1	1.3	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|429217659|ref|YP_007175649.1|	-	1e-29	103.3	0.1	2e-29	102.3	0.1	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_3	PF04565.11	gi|429217659|ref|YP_007175649.1|	-	2.4e-26	91.2	0.0	5.6e-26	90.0	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_7	PF04560.15	gi|429217659|ref|YP_007175649.1|	-	4.5e-26	90.9	0.0	1.3e-25	89.4	0.0	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.8	gi|429217659|ref|YP_007175649.1|	-	2.3e-18	65.7	0.1	5.8e-18	64.4	0.1	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|429217659|ref|YP_007175649.1|	-	1.2e-09	37.9	0.7	3e-09	36.6	0.5	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb1_1	PF04997.7	gi|429217660|ref|YP_007175650.1|	-	2.7e-73	247.1	1.9	1.1e-72	245.1	0.1	2.4	2	1	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|429217660|ref|YP_007175650.1|	-	6.1e-68	227.9	0.3	1.8e-67	226.4	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|429217660|ref|YP_007175650.1|	-	5.6e-36	123.6	0.0	1.4e-35	122.4	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|429217660|ref|YP_007175650.1|	-	9e-32	109.0	0.1	2.6e-31	107.5	0.0	1.9	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|429217660|ref|YP_007175650.1|	-	1.9e-30	106.1	1.2	2.4e-30	105.7	0.1	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	5
PCRF	PF03462.13	gi|429217660|ref|YP_007175650.1|	-	0.053	13.2	0.0	0.17	11.5	0.0	1.9	1	0	0	1	1	1	0	PCRF	domain
Rpr2	PF04032.11	gi|429217660|ref|YP_007175650.1|	-	0.11	12.3	0.1	0.35	10.7	0.1	1.9	1	0	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DUF164	PF02591.10	gi|429217660|ref|YP_007175650.1|	-	0.16	11.7	1.2	14	5.5	0.0	2.7	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|429217660|ref|YP_007175650.1|	-	0.53	9.5	11.0	0.29	10.4	1.3	3.2	2	1	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|429217660|ref|YP_007175650.1|	-	0.74	9.3	8.7	3.4	7.2	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|429217660|ref|YP_007175650.1|	-	2.9	7.6	6.9	0.44	10.2	0.1	2.5	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
zf-ISL3	PF14690.1	gi|429217660|ref|YP_007175650.1|	-	5.9	6.9	8.1	9.6	6.3	0.1	3.3	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
RNA_pol_Rpb1_5	PF04998.12	gi|429217661|ref|YP_007175651.1|	-	8.4e-49	166.2	3.5	1.2e-48	165.7	2.4	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
Ribosomal_L7Ae	PF01248.21	gi|429217662|ref|YP_007175652.1|	-	1.2e-17	63.2	0.0	1.3e-17	63.0	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
Cys_rich_KTR	PF14205.1	gi|429217662|ref|YP_007175652.1|	-	0.15	11.5	0.0	0.23	10.9	0.0	1.4	1	0	0	1	1	1	0	Cysteine-rich	KTR
KH_2	PF07650.12	gi|429217663|ref|YP_007175653.1|	-	7.1e-16	57.5	4.5	1.2e-09	37.5	0.0	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|429217663|ref|YP_007175653.1|	-	3.2e-13	49.1	1.6	2.4e-06	27.0	0.5	2.2	2	0	0	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|429217663|ref|YP_007175653.1|	-	4.3e-10	39.2	7.8	8.2e-10	38.3	0.5	2.5	1	1	2	3	3	3	2	NusA-like	KH	domain
KH_1	PF00013.24	gi|429217663|ref|YP_007175653.1|	-	2.3e-06	27.1	1.2	0.014	14.9	0.0	2.3	2	0	0	2	2	2	2	KH	domain
HAP1_N	PF04849.8	gi|429217663|ref|YP_007175653.1|	-	0.0018	17.2	0.5	0.0021	17.0	0.4	1.0	1	0	0	1	1	1	1	HAP1	N-terminal	conserved	region
KH_3	PF13014.1	gi|429217663|ref|YP_007175653.1|	-	2.6	7.7	5.1	8.9	6.0	0.2	2.8	2	0	0	2	2	2	0	KH	domain
Ribosom_S12_S23	PF00164.20	gi|429217665|ref|YP_007175655.1|	-	3.6e-39	132.9	0.6	4.2e-39	132.7	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
DNase-RNase	PF02577.9	gi|429217666|ref|YP_007175656.1|	-	3.1e-07	29.6	0.0	4.4e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosomal_S7	PF00177.16	gi|429217667|ref|YP_007175657.1|	-	2.8e-45	153.5	0.0	3.3e-45	153.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
GTP_EFTU	PF00009.22	gi|429217668|ref|YP_007175658.1|	-	1.4e-57	194.1	0.0	1.8e-57	193.8	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|429217668|ref|YP_007175658.1|	-	1.2e-28	99.1	0.1	3.8e-28	97.5	0.1	1.9	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|429217668|ref|YP_007175658.1|	-	9.1e-17	60.9	2.7	2e-16	59.8	1.9	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|429217668|ref|YP_007175658.1|	-	5.1e-07	29.2	1.5	1.1e-06	28.1	1.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|429217668|ref|YP_007175658.1|	-	3.8e-05	23.6	0.0	0.00027	20.8	0.0	2.1	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|429217668|ref|YP_007175658.1|	-	0.00021	21.7	0.1	0.0019	18.7	0.1	2.3	1	1	0	1	1	1	1	Miro-like	protein
Gtr1_RagA	PF04670.7	gi|429217668|ref|YP_007175658.1|	-	0.02	14.0	0.0	0.15	11.2	0.0	2.0	1	1	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
Septin	PF00735.13	gi|429217668|ref|YP_007175658.1|	-	0.061	12.3	0.0	0.16	10.9	0.0	1.6	1	1	0	1	1	1	0	Septin
MRP-S22	PF10245.4	gi|429217668|ref|YP_007175658.1|	-	0.12	11.7	0.0	0.19	11.0	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	28S	ribosomal	protein	S22
Ras	PF00071.17	gi|429217668|ref|YP_007175658.1|	-	0.13	11.6	0.1	0.95	8.8	0.0	2.2	2	0	0	2	2	2	0	Ras	family
Ribosomal_S10	PF00338.17	gi|429217669|ref|YP_007175659.1|	-	2.4e-33	113.8	0.0	2.6e-33	113.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
CPSase_sm_chain	PF00988.17	gi|429217670|ref|YP_007175660.1|	-	2.2e-47	159.8	0.0	3.3e-47	159.2	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|429217670|ref|YP_007175660.1|	-	1.1e-37	129.3	0.0	2.4e-37	128.2	0.0	1.5	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|429217670|ref|YP_007175660.1|	-	5.8e-08	32.4	0.2	7.9e-06	25.4	0.2	2.2	1	1	0	1	1	1	1	Peptidase	C26
CPSase_L_D2	PF02786.12	gi|429217671|ref|YP_007175661.1|	-	1.4e-91	305.4	0.0	1.4e-61	207.4	0.0	2.4	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|429217671|ref|YP_007175661.1|	-	7.7e-35	119.3	0.6	3.2e-34	117.3	0.4	2.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|429217671|ref|YP_007175661.1|	-	1e-34	118.9	0.0	2.5e-20	72.6	0.0	2.5	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|429217671|ref|YP_007175661.1|	-	9.3e-25	87.4	0.0	1.3e-11	44.5	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|429217671|ref|YP_007175661.1|	-	3e-16	59.0	0.0	3.1e-08	32.7	0.0	4.0	3	1	0	3	3	3	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|429217671|ref|YP_007175661.1|	-	1.5e-13	50.4	0.0	8.7e-09	34.9	0.0	2.6	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|429217671|ref|YP_007175661.1|	-	1.5e-11	44.1	1.1	0.0001	21.7	0.0	3.1	3	1	0	3	3	3	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|429217671|ref|YP_007175661.1|	-	1.4e-05	25.0	0.2	0.18	11.6	0.1	3.1	2	1	0	2	2	2	2	ATP-grasp	domain
GARS_A	PF01071.14	gi|429217671|ref|YP_007175661.1|	-	4e-05	23.2	0.0	0.16	11.4	0.0	3.1	2	1	0	2	2	2	2	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
MGS	PF02142.17	gi|429217671|ref|YP_007175661.1|	-	0.013	15.4	0.4	6.4	6.7	0.0	3.7	4	0	0	4	4	4	0	MGS-like	domain
ATP-grasp_5	PF13549.1	gi|429217671|ref|YP_007175661.1|	-	0.05	12.8	0.0	6.4	5.9	0.0	2.6	2	0	0	2	2	2	0	ATP-grasp	domain
Rhabdo_ncap_2	PF03216.8	gi|429217672|ref|YP_007175662.1|	-	0.039	12.6	0.8	0.041	12.6	0.6	1.0	1	0	0	1	1	1	0	Rhabdovirus	nucleoprotein
Symplekin_C	PF12295.3	gi|429217672|ref|YP_007175662.1|	-	0.082	12.8	0.9	0.084	12.7	0.6	1.1	1	0	0	1	1	1	0	Symplekin	tight	junction	protein	C	terminal
NAD_binding_2	PF03446.10	gi|429217673|ref|YP_007175663.1|	-	2.5e-32	111.9	0.1	3.3e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|429217673|ref|YP_007175663.1|	-	5.3e-23	81.3	0.0	8.2e-23	80.7	0.0	1.3	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|429217673|ref|YP_007175663.1|	-	3.4e-07	30.5	0.0	1.2e-06	28.8	0.0	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|429217673|ref|YP_007175663.1|	-	1.8e-06	27.1	0.0	3e-06	26.5	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|429217673|ref|YP_007175663.1|	-	8.5e-06	25.2	0.0	1.5e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Shikimate_DH	PF01488.15	gi|429217673|ref|YP_007175663.1|	-	0.00055	20.0	0.0	0.0011	19.0	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|429217673|ref|YP_007175663.1|	-	0.0037	16.6	1.3	0.2	11.0	0.1	2.4	1	1	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|429217673|ref|YP_007175663.1|	-	0.0068	16.9	0.0	0.015	15.8	0.0	1.6	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Penicil_amidase	PF01804.13	gi|429217674|ref|YP_007175664.1|	-	6.7e-152	508.1	0.4	8.2e-152	507.8	0.3	1.0	1	0	0	1	1	1	1	Penicillin	amidase
UBA_3	PF09288.5	gi|429217676|ref|YP_007175666.1|	-	0.068	12.7	0.0	0.35	10.5	0.0	2.0	2	0	0	2	2	2	0	Fungal	ubiquitin-associated	domain
CN_hydrolase	PF00795.17	gi|429217677|ref|YP_007175667.1|	-	9.5e-34	116.3	0.0	1.3e-33	115.8	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF2624	PF11116.3	gi|429217677|ref|YP_007175667.1|	-	0.066	13.7	0.5	0.23	11.9	0.3	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2624)
AP_endonuc_2	PF01261.19	gi|429217677|ref|YP_007175667.1|	-	0.12	11.6	0.0	0.28	10.4	0.0	1.6	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
SHP	PF03579.8	gi|429217678|ref|YP_007175668.1|	-	0.00019	20.7	0.1	0.0002	20.6	0.1	1.0	1	0	0	1	1	1	1	Small	hydrophobic	protein
Choline_transpo	PF04515.7	gi|429217678|ref|YP_007175668.1|	-	0.0015	17.3	0.1	0.0016	17.2	0.1	1.0	1	0	0	1	1	1	1	Plasma-membrane	choline	transporter
Yip1	PF04893.12	gi|429217678|ref|YP_007175668.1|	-	0.027	13.9	1.9	0.03	13.8	1.3	1.1	1	0	0	1	1	1	0	Yip1	domain
DUF4131	PF13567.1	gi|429217678|ref|YP_007175668.1|	-	0.098	12.0	0.1	0.11	11.9	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF997	PF06196.7	gi|429217678|ref|YP_007175668.1|	-	0.11	12.0	0.6	0.12	11.9	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF997)
FixQ	PF05545.6	gi|429217678|ref|YP_007175668.1|	-	0.14	11.7	3.0	0.2	11.2	2.1	1.4	1	0	0	1	1	1	0	Cbb3-type	cytochrome	oxidase	component	FixQ
DUF3021	PF11457.3	gi|429217678|ref|YP_007175668.1|	-	0.28	11.0	3.4	0.29	10.9	2.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3021)
2TM	PF13239.1	gi|429217678|ref|YP_007175668.1|	-	0.4	10.7	2.5	0.42	10.6	1.7	1.2	1	0	0	1	1	1	0	2TM	domain
O-ag_pol_Wzy	PF14296.1	gi|429217678|ref|YP_007175668.1|	-	1.1	7.7	6.0	1.2	7.6	4.1	1.0	1	0	0	1	1	1	0	O-antigen	polysaccharide	polymerase	Wzy
Thermopsin	PF05317.6	gi|429217679|ref|YP_007175669.1|	-	7.6e-23	80.7	37.8	7.6e-23	80.7	26.2	4.2	3	2	1	4	4	4	1	Thermopsin
DUF422	PF04240.7	gi|429217680|ref|YP_007175670.1|	-	2.4e-27	95.7	18.5	4e-27	95.0	12.8	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF422)
DUF373	PF04123.8	gi|429217680|ref|YP_007175670.1|	-	0.23	10.4	13.4	0.4	9.6	9.2	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DUF2427	PF10348.4	gi|429217680|ref|YP_007175670.1|	-	3.8	7.1	10.5	2.2	7.9	4.2	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2427)
LysE	PF01810.13	gi|429217681|ref|YP_007175671.1|	-	1e-14	54.2	15.3	1.4e-14	53.8	10.6	1.1	1	0	0	1	1	1	1	LysE	type	translocator
FA_desaturase	PF00487.19	gi|429217681|ref|YP_007175671.1|	-	2.6	7.4	9.7	1.1	8.6	4.2	2.1	1	1	0	1	1	1	0	Fatty	acid	desaturase
DUF3834	PF12916.2	gi|429217682|ref|YP_007175672.1|	-	8.3e-62	207.7	2.9	9.4e-62	207.5	2.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
SBP_bac_3	PF00497.15	gi|429217682|ref|YP_007175672.1|	-	0.015	14.5	0.0	0.021	14.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
NMT1	PF09084.6	gi|429217682|ref|YP_007175672.1|	-	0.029	13.9	0.1	0.76	9.3	0.0	2.1	2	0	0	2	2	2	0	NMT1/THI5	like
DUF485	PF04341.7	gi|429217683|ref|YP_007175673.1|	-	0.011	15.4	0.8	0.019	14.6	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF485
DUF4231	PF14015.1	gi|429217683|ref|YP_007175673.1|	-	0.014	15.3	0.2	0.02	14.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
MFS_1	PF07690.11	gi|429217683|ref|YP_007175673.1|	-	0.019	13.7	0.2	0.024	13.3	0.1	1.1	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
DUF3611	PF12263.3	gi|429217683|ref|YP_007175673.1|	-	0.053	12.9	0.3	0.071	12.5	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3611)
DUF910	PF06014.6	gi|429217683|ref|YP_007175673.1|	-	0.14	12.0	0.3	0.89	9.5	0.0	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF910)
HemY_N	PF07219.8	gi|429217683|ref|YP_007175673.1|	-	0.27	10.7	5.0	2.4	7.7	0.2	2.2	1	1	1	2	2	2	0	HemY	protein	N-terminus
DUF1129	PF06570.6	gi|429217683|ref|YP_007175673.1|	-	0.34	10.1	2.8	0.52	9.5	1.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
Thiolase_N	PF00108.18	gi|429217684|ref|YP_007175674.1|	-	5e-68	228.9	0.0	3.3e-67	226.2	0.0	1.9	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|429217684|ref|YP_007175674.1|	-	7.2e-49	164.3	0.6	1.4e-48	163.3	0.4	1.5	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|429217684|ref|YP_007175674.1|	-	1.3e-05	24.8	0.6	0.00012	21.6	0.3	2.3	2	1	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III_C	PF08541.5	gi|429217684|ref|YP_007175674.1|	-	0.0029	17.5	0.2	0.01	15.8	0.1	1.9	1	1	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
SpoVAD	PF07451.6	gi|429217684|ref|YP_007175674.1|	-	0.016	13.6	0.1	0.11	10.9	0.0	2.0	2	0	0	2	2	2	0	Stage	V	sporulation	protein	AD	(SpoVAD)
PBC	PF03792.8	gi|429217684|ref|YP_007175674.1|	-	0.078	12.6	0.0	0.18	11.4	0.0	1.5	1	0	0	1	1	1	0	PBC	domain
3HCDH_N	PF02737.13	gi|429217685|ref|YP_007175675.1|	-	1.3e-65	220.4	1.9	1.3e-65	220.4	1.4	1.9	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|429217685|ref|YP_007175675.1|	-	2.2e-57	194.0	0.0	4.2e-57	193.0	0.0	1.5	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|429217685|ref|YP_007175675.1|	-	9.9e-34	115.6	0.0	6.6e-23	80.9	0.0	2.9	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|429217685|ref|YP_007175675.1|	-	1.1e-07	31.7	0.2	2.6e-07	30.5	0.1	1.7	2	0	0	2	2	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|429217685|ref|YP_007175675.1|	-	1.3e-07	31.6	0.1	3.2e-07	30.3	0.1	1.7	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|429217685|ref|YP_007175675.1|	-	2.7e-05	24.5	0.4	0.00016	22.0	0.1	2.6	2	0	0	2	2	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.9	gi|429217685|ref|YP_007175675.1|	-	0.00033	20.0	0.8	0.0008	18.8	0.5	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|429217685|ref|YP_007175675.1|	-	0.00042	19.9	1.1	0.0013	18.3	0.2	2.1	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ECH_C	PF13766.1	gi|429217685|ref|YP_007175675.1|	-	0.0026	17.9	0.1	0.064	13.3	0.0	2.9	3	0	0	3	3	3	1	2-enoyl-CoA	Hydratase	C-terminal	region
NAD_binding_7	PF13241.1	gi|429217685|ref|YP_007175675.1|	-	0.014	15.5	0.3	0.047	13.9	0.2	1.9	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Smr	PF01713.16	gi|429217685|ref|YP_007175675.1|	-	0.017	15.2	0.1	0.17	12.0	0.0	2.6	2	0	0	2	2	2	0	Smr	domain
IlvN	PF07991.7	gi|429217685|ref|YP_007175675.1|	-	0.017	14.4	3.0	0.39	10.0	1.7	2.6	2	1	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
SSFA2_C	PF14723.1	gi|429217685|ref|YP_007175675.1|	-	0.047	13.4	0.1	0.3	10.8	0.0	2.1	2	0	0	2	2	2	0	Sperm-specific	antigen	2	C-terminus
2-Hacid_dh_C	PF02826.14	gi|429217685|ref|YP_007175675.1|	-	0.2	10.7	0.9	0.9	8.6	0.2	2.1	1	1	1	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
adh_short_C2	PF13561.1	gi|429217686|ref|YP_007175676.1|	-	1.5e-33	116.5	1.5	1.7e-33	116.4	1.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|429217686|ref|YP_007175676.1|	-	1.1e-30	106.7	0.0	1.4e-30	106.4	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|429217686|ref|YP_007175676.1|	-	2.5e-14	53.3	0.0	3.6e-14	52.8	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|429217686|ref|YP_007175676.1|	-	0.00045	19.7	0.0	0.00063	19.2	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
DUF1776	PF08643.5	gi|429217686|ref|YP_007175676.1|	-	0.0026	16.9	0.1	0.0035	16.5	0.0	1.2	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Polysacc_synt_2	PF02719.10	gi|429217686|ref|YP_007175676.1|	-	0.0073	15.2	0.1	0.012	14.5	0.0	1.3	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.14	gi|429217686|ref|YP_007175676.1|	-	0.032	12.9	0.1	0.046	12.4	0.1	1.2	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Methyltransf_11	PF08241.7	gi|429217687|ref|YP_007175677.1|	-	6.4e-16	58.6	0.0	9.4e-16	58.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|429217687|ref|YP_007175677.1|	-	6.9e-10	38.8	0.0	9.8e-10	38.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|429217687|ref|YP_007175677.1|	-	4.2e-07	29.6	0.0	5.7e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|429217687|ref|YP_007175677.1|	-	3.5e-05	24.2	0.0	7.4e-05	23.1	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|429217687|ref|YP_007175677.1|	-	4.8e-05	22.5	0.1	7.9e-05	21.8	0.0	1.5	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.7	gi|429217687|ref|YP_007175677.1|	-	0.002	17.5	0.0	0.0032	16.8	0.0	1.5	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_25	PF13649.1	gi|429217687|ref|YP_007175677.1|	-	0.03	14.6	0.0	0.053	13.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429217687|ref|YP_007175677.1|	-	0.047	14.2	0.0	0.12	13.0	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Lactamase_B	PF00753.22	gi|429217688|ref|YP_007175678.1|	-	1.4e-23	83.5	0.1	1.8e-23	83.2	0.1	1.0	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|429217688|ref|YP_007175678.1|	-	1.4e-08	34.4	0.1	1.9e-08	34.0	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|429217688|ref|YP_007175678.1|	-	0.051	13.2	0.3	0.19	11.4	0.1	2.0	2	1	0	2	2	2	0	Beta-lactamase	superfamily	domain
Methyltrn_RNA_3	PF02598.12	gi|429217689|ref|YP_007175679.1|	-	1.4e-41	142.7	0.4	2e-41	142.2	0.3	1.2	1	0	0	1	1	1	1	Putative	RNA	methyltransferase
B12-binding	PF02310.14	gi|429217689|ref|YP_007175679.1|	-	0.012	15.5	0.0	0.018	14.9	0.0	1.2	1	0	0	1	1	1	0	B12	binding	domain
PEP_mutase	PF13714.1	gi|429217690|ref|YP_007175680.1|	-	4.3e-62	209.4	0.3	5e-62	209.2	0.2	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|429217690|ref|YP_007175680.1|	-	2.7e-19	68.7	0.3	4e-19	68.2	0.2	1.2	1	0	0	1	1	1	1	Isocitrate	lyase	family
Lactamase_B	PF00753.22	gi|429217691|ref|YP_007175681.1|	-	5.7e-11	42.4	0.0	8.8e-11	41.8	0.0	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|429217691|ref|YP_007175681.1|	-	0.00055	19.5	0.0	0.00065	19.2	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
NosD	PF05048.8	gi|429217692|ref|YP_007175682.1|	-	2.1e-21	76.1	47.7	2.1e-21	76.1	33.1	2.6	2	1	0	2	2	2	1	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.1	gi|429217692|ref|YP_007175682.1|	-	0.00016	21.4	31.0	0.00016	21.4	21.5	2.2	1	1	1	2	2	2	1	Right	handed	beta	helix	region
Acetyltransf_1	PF00583.19	gi|429217694|ref|YP_007175684.1|	-	4.3e-20	71.5	0.0	5.6e-20	71.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|429217694|ref|YP_007175684.1|	-	7.8e-13	48.3	0.0	1.1e-12	47.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|429217694|ref|YP_007175684.1|	-	8.4e-12	45.2	0.0	9.7e-12	45.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|429217694|ref|YP_007175684.1|	-	1.8e-10	40.4	0.0	2.6e-10	39.8	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|429217694|ref|YP_007175684.1|	-	2.5e-09	37.0	0.0	1.1e-08	35.0	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|429217694|ref|YP_007175684.1|	-	1.2e-06	28.5	0.4	1.9e-06	27.9	0.3	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|429217694|ref|YP_007175684.1|	-	5.1e-06	26.4	0.0	6.6e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|429217694|ref|YP_007175684.1|	-	0.00073	19.3	0.0	0.0011	18.8	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
GNAT_acetyltr_2	PF13718.1	gi|429217694|ref|YP_007175684.1|	-	0.0097	15.2	0.0	0.013	14.7	0.0	1.2	1	0	0	1	1	1	1	GNAT	acetyltransferase	2
Acetyltransf_3	PF13302.1	gi|429217694|ref|YP_007175684.1|	-	0.01	16.0	0.1	0.018	15.2	0.1	1.5	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Lar_restr_allev	PF14354.1	gi|429217695|ref|YP_007175685.1|	-	0.0041	17.4	0.2	0.0059	16.8	0.1	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
DZR	PF12773.2	gi|429217695|ref|YP_007175685.1|	-	0.062	13.1	1.1	0.16	11.8	0.8	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
FeS	PF04060.8	gi|429217695|ref|YP_007175685.1|	-	0.094	12.3	0.7	0.19	11.3	0.5	1.4	1	0	0	1	1	1	0	Putative	Fe-S	cluster
zf-ribbon_3	PF13248.1	gi|429217695|ref|YP_007175685.1|	-	0.14	11.3	2.2	3.6	6.9	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Epimerase	PF01370.16	gi|429217696|ref|YP_007175686.1|	-	1.7e-52	178.2	0.0	2.8e-52	177.5	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|429217696|ref|YP_007175686.1|	-	2.5e-24	85.4	0.1	3.8e-24	84.8	0.1	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|429217696|ref|YP_007175686.1|	-	4e-22	78.4	0.0	4.7e-22	78.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|429217696|ref|YP_007175686.1|	-	5.6e-15	55.0	0.1	5.5e-14	51.7	0.0	2.1	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|429217696|ref|YP_007175686.1|	-	6.5e-13	49.0	0.0	9.7e-13	48.5	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|429217696|ref|YP_007175686.1|	-	3.9e-10	39.0	0.2	2e-08	33.5	0.1	2.2	1	1	0	1	1	1	1	Male	sterility	protein
NmrA	PF05368.8	gi|429217696|ref|YP_007175686.1|	-	6e-06	25.6	0.0	4.2e-05	22.9	0.0	2.0	2	0	0	2	2	2	1	NmrA-like	family
adh_short	PF00106.20	gi|429217696|ref|YP_007175686.1|	-	9.4e-06	25.6	0.0	1.8e-05	24.6	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
TrkA_N	PF02254.13	gi|429217696|ref|YP_007175686.1|	-	0.0042	17.0	0.0	0.01	15.8	0.0	1.8	1	1	0	1	1	1	1	TrkA-N	domain
Ldh_1_N	PF00056.18	gi|429217696|ref|YP_007175686.1|	-	0.0085	15.9	0.0	0.017	14.9	0.0	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|429217696|ref|YP_007175686.1|	-	0.011	16.1	0.0	0.81	10.1	0.0	2.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
KR	PF08659.5	gi|429217696|ref|YP_007175686.1|	-	0.031	13.9	0.1	0.15	11.7	0.1	2.0	1	1	0	1	1	1	0	KR	domain
3HCDH_N	PF02737.13	gi|429217696|ref|YP_007175686.1|	-	0.047	13.3	0.0	0.089	12.4	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|429217696|ref|YP_007175686.1|	-	0.11	12.3	0.0	0.44	10.3	0.0	2.0	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
HEM4	PF02602.10	gi|429217696|ref|YP_007175686.1|	-	0.13	11.4	0.0	0.34	10.1	0.0	1.6	1	1	0	1	1	1	0	Uroporphyrinogen-III	synthase	HemD
GCD14	PF08704.5	gi|429217697|ref|YP_007175687.1|	-	8.7e-28	97.4	0.0	1.4e-27	96.7	0.0	1.3	1	1	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|429217697|ref|YP_007175687.1|	-	3e-13	49.6	0.3	6.2e-13	48.6	0.2	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|429217697|ref|YP_007175687.1|	-	1.1e-09	38.1	0.0	1.5e-09	37.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|429217697|ref|YP_007175687.1|	-	4e-09	37.0	0.0	6.7e-09	36.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|429217697|ref|YP_007175687.1|	-	4e-07	29.5	0.0	6.6e-07	28.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|429217697|ref|YP_007175687.1|	-	1.7e-06	27.3	0.0	2.1e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
RrnaAD	PF00398.15	gi|429217697|ref|YP_007175687.1|	-	2.6e-06	26.6	0.0	3.6e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|429217697|ref|YP_007175687.1|	-	2.7e-06	27.3	0.0	4.2e-06	26.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|429217697|ref|YP_007175687.1|	-	5.1e-05	22.4	0.0	7.4e-05	21.8	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_25	PF13649.1	gi|429217697|ref|YP_007175687.1|	-	7.8e-05	22.9	0.0	0.00015	22.0	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|429217697|ref|YP_007175687.1|	-	8.9e-05	21.6	0.0	0.00014	21.0	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_11	PF08241.7	gi|429217697|ref|YP_007175687.1|	-	9.5e-05	22.8	0.0	0.00028	21.3	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|429217697|ref|YP_007175687.1|	-	0.00016	21.2	0.0	0.00029	20.4	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_12	PF08242.7	gi|429217697|ref|YP_007175687.1|	-	0.00029	21.2	0.1	0.00083	19.7	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|429217697|ref|YP_007175687.1|	-	0.0056	15.8	0.0	0.013	14.6	0.0	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_16	PF10294.4	gi|429217697|ref|YP_007175687.1|	-	0.0082	15.6	0.1	0.019	14.4	0.0	1.6	2	0	0	2	2	2	1	Putative	methyltransferase
TRM	PF02005.11	gi|429217697|ref|YP_007175687.1|	-	0.012	14.5	0.1	0.021	13.7	0.0	1.5	2	0	0	2	2	2	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Cons_hypoth95	PF03602.10	gi|429217697|ref|YP_007175687.1|	-	0.029	13.7	0.0	0.076	12.3	0.0	1.6	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.1	gi|429217697|ref|YP_007175687.1|	-	0.037	13.7	0.0	0.062	13.0	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_24	PF13578.1	gi|429217697|ref|YP_007175687.1|	-	0.047	14.5	0.0	0.083	13.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Met_10	PF02475.11	gi|429217697|ref|YP_007175687.1|	-	0.048	13.2	0.3	0.068	12.7	0.2	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
Prefoldin_3	PF13758.1	gi|429217698|ref|YP_007175688.1|	-	0.012	15.3	0.1	0.042	13.6	0.1	1.9	1	0	0	1	1	1	0	Prefoldin	subunit
DUF3571	PF12095.3	gi|429217698|ref|YP_007175688.1|	-	0.32	11.2	4.1	0.58	10.4	0.5	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3571)
CENP-F_leu_zip	PF10473.4	gi|429217698|ref|YP_007175688.1|	-	0.43	10.4	10.9	0.92	9.3	0.5	2.3	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
bZIP_1	PF00170.16	gi|429217698|ref|YP_007175688.1|	-	0.47	10.4	5.1	0.36	10.8	1.1	2.4	2	0	0	2	2	2	0	bZIP	transcription	factor
AMP-binding	PF00501.23	gi|429217699|ref|YP_007175689.1|	-	6.4e-73	245.5	0.0	8.1e-73	245.1	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|429217699|ref|YP_007175689.1|	-	3.3e-16	59.9	0.0	5.9e-16	59.1	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding_C_2	PF14535.1	gi|429217699|ref|YP_007175689.1|	-	0.027	14.5	0.5	0.072	13.1	0.1	1.9	2	0	0	2	2	2	0	AMP-binding	enzyme	C-terminal	domain
Methyltransf_31	PF13847.1	gi|429217700|ref|YP_007175690.1|	-	1.3e-12	47.5	0.0	1.9e-12	47.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|429217700|ref|YP_007175690.1|	-	3.4e-11	43.6	0.0	6.2e-11	42.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|429217700|ref|YP_007175690.1|	-	2.5e-09	36.4	0.0	3.3e-09	36.0	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
DOT1	PF08123.8	gi|429217700|ref|YP_007175690.1|	-	2.6e-09	36.6	0.0	4e-08	32.8	0.0	2.0	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_25	PF13649.1	gi|429217700|ref|YP_007175690.1|	-	2.4e-08	34.2	0.0	5.3e-08	33.1	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|429217700|ref|YP_007175690.1|	-	8.6e-08	31.5	0.0	1.1e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CMAS	PF02353.15	gi|429217700|ref|YP_007175690.1|	-	4.2e-07	29.3	0.0	5.5e-07	28.9	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_26	PF13659.1	gi|429217700|ref|YP_007175690.1|	-	1.1e-06	28.6	0.0	1.6e-06	28.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|429217700|ref|YP_007175690.1|	-	1.2e-05	25.6	0.0	2.8e-05	24.5	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_2	PF00891.13	gi|429217700|ref|YP_007175690.1|	-	2.8e-05	23.4	0.0	3.8e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
MTS	PF05175.9	gi|429217700|ref|YP_007175690.1|	-	5e-05	22.7	0.0	6.9e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_12	PF08242.7	gi|429217700|ref|YP_007175690.1|	-	0.0011	19.3	0.0	0.0017	18.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|429217700|ref|YP_007175690.1|	-	0.0016	18.0	0.0	0.002	17.6	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.8	gi|429217700|ref|YP_007175690.1|	-	0.0019	17.3	0.0	0.0024	17.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.10	gi|429217700|ref|YP_007175690.1|	-	0.01	15.2	0.0	0.014	14.8	0.0	1.1	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
UPF0020	PF01170.13	gi|429217700|ref|YP_007175690.1|	-	0.012	15.2	0.0	0.018	14.6	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Ubie_methyltran	PF01209.13	gi|429217700|ref|YP_007175690.1|	-	0.016	14.3	0.0	0.023	13.8	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Met_10	PF02475.11	gi|429217700|ref|YP_007175690.1|	-	0.044	13.3	0.0	0.055	13.0	0.0	1.1	1	0	0	1	1	1	0	Met-10+	like-protein
DUF633	PF04816.7	gi|429217700|ref|YP_007175690.1|	-	0.055	12.7	0.0	0.082	12.2	0.0	1.3	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF633)
Methyltransf_23	PF13489.1	gi|429217700|ref|YP_007175690.1|	-	0.073	12.7	0.0	0.092	12.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
TehB	PF03848.9	gi|429217700|ref|YP_007175690.1|	-	0.094	11.8	0.0	0.15	11.2	0.0	1.3	1	1	0	1	1	1	0	Tellurite	resistance	protein	TehB
Methyltransf_8	PF05148.10	gi|429217700|ref|YP_007175690.1|	-	0.1	12.2	0.0	0.16	11.6	0.0	1.5	1	1	0	1	1	1	0	Hypothetical	methyltransferase
Flavin_Reduct	PF01613.13	gi|429217701|ref|YP_007175691.1|	-	4.3e-23	81.8	0.0	5.4e-23	81.5	0.0	1.1	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Membralin	PF09746.4	gi|429217701|ref|YP_007175691.1|	-	0.046	12.7	0.1	0.057	12.4	0.1	1.1	1	0	0	1	1	1	0	Tumour-associated	protein
Helicase_RecD	PF05127.9	gi|429217702|ref|YP_007175692.1|	-	3.5e-52	176.6	0.0	6.1e-52	175.8	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|429217702|ref|YP_007175692.1|	-	3.5e-46	157.0	0.0	3.6e-45	153.7	0.0	2.2	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|429217702|ref|YP_007175692.1|	-	1.3e-20	72.8	0.0	4e-20	71.2	0.0	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|429217702|ref|YP_007175692.1|	-	5.3e-06	26.5	0.0	2.6e-05	24.2	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
tRNA_bind_2	PF13725.1	gi|429217702|ref|YP_007175692.1|	-	2.6e-05	24.2	0.1	6e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	Possible	tRNA	binding	domain
Acetyltransf_1	PF00583.19	gi|429217702|ref|YP_007175692.1|	-	0.00074	19.4	0.0	0.0022	17.9	0.0	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Sigma70_r4_2	PF08281.7	gi|429217702|ref|YP_007175692.1|	-	0.0086	15.5	0.0	0.023	14.1	0.0	1.8	1	0	0	1	1	1	1	Sigma-70,	region	4
PPDK_N	PF01326.14	gi|429217703|ref|YP_007175693.1|	-	5.9e-88	295.0	0.0	1.1e-87	294.2	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|429217703|ref|YP_007175693.1|	-	8.4e-80	267.7	0.0	1.3e-79	267.2	0.0	1.2	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|429217703|ref|YP_007175693.1|	-	6.2e-27	92.9	0.9	1.5e-26	91.7	0.7	1.7	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
YqbF	PF14553.1	gi|429217704|ref|YP_007175694.1|	-	0.067	12.8	0.2	0.067	12.8	0.2	2.5	3	0	0	3	3	3	0	YqbF,	hypothetical	protein	domain
Glyco_hydro_38	PF01074.17	gi|429217705|ref|YP_007175695.1|	-	1.5e-68	231.0	0.0	2.5e-68	230.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_38C	PF07748.8	gi|429217705|ref|YP_007175695.1|	-	5.5e-43	147.4	0.1	7.7e-43	146.9	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Alpha-mann_mid	PF09261.6	gi|429217705|ref|YP_007175695.1|	-	1.9e-11	43.9	0.3	4.8e-11	42.7	0.0	1.9	2	0	0	2	2	2	1	Alpha	mannosidase,	middle	domain
Isochorismatase	PF00857.15	gi|429217706|ref|YP_007175696.1|	-	4e-44	150.6	0.0	4.6e-44	150.3	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
tRNA-synt_His	PF13393.1	gi|429217707|ref|YP_007175697.1|	-	4.2e-48	164.0	0.0	5.3e-48	163.6	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|429217707|ref|YP_007175697.1|	-	5.5e-22	78.1	0.0	1e-21	77.2	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|429217707|ref|YP_007175697.1|	-	1.7e-12	47.1	1.1	1.7e-12	47.1	0.8	1.8	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2	PF00152.15	gi|429217707|ref|YP_007175697.1|	-	6.3e-07	28.4	0.1	3.5e-06	26.0	0.0	2.2	2	1	0	2	2	2	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.15	gi|429217707|ref|YP_007175697.1|	-	0.0033	16.6	0.0	0.0069	15.6	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
PTPS	PF01242.14	gi|429217708|ref|YP_007175698.1|	-	0.0066	16.1	0.0	0.0076	15.9	0.0	1.1	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
tRNA-synt_2	PF00152.15	gi|429217709|ref|YP_007175699.1|	-	1.5e-89	300.0	0.7	1.9e-89	299.7	0.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|429217709|ref|YP_007175699.1|	-	8.6e-13	47.9	0.8	1.7e-12	47.0	0.6	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|429217709|ref|YP_007175699.1|	-	0.00022	20.4	0.2	0.011	14.9	0.1	2.4	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
DUF4301	PF14134.1	gi|429217709|ref|YP_007175699.1|	-	0.054	12.0	0.0	0.12	10.8	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4301)
EnY2	PF10163.4	gi|429217709|ref|YP_007175699.1|	-	0.06	13.2	0.1	11	5.9	0.0	2.6	2	0	0	2	2	2	0	Transcription	factor	e(y)2
tRNA_anti-like	PF12869.2	gi|429217709|ref|YP_007175699.1|	-	0.11	11.9	0.2	0.18	11.2	0.1	1.3	1	0	0	1	1	1	0	tRNA_anti-like
TerC	PF03741.11	gi|429217710|ref|YP_007175700.1|	-	1.5e-33	115.7	10.1	1.5e-33	115.7	7.0	2.3	2	1	1	3	3	3	2	Integral	membrane	protein	TerC	family
Wzz	PF02706.10	gi|429217710|ref|YP_007175700.1|	-	6.2	6.6	6.0	16	5.2	1.1	2.4	2	0	0	2	2	2	0	Chain	length	determinant	protein
Radical_SAM	PF04055.16	gi|429217711|ref|YP_007175701.1|	-	2.7e-15	56.9	0.0	4.5e-15	56.2	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF1743	PF08489.6	gi|429217711|ref|YP_007175701.1|	-	0.17	11.6	0.0	2.2	8.0	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1743)
PhoU	PF01895.14	gi|429217712|ref|YP_007175702.1|	-	2.4e-13	50.3	1.6	2.4e-13	50.3	1.1	2.8	3	0	0	3	3	3	1	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|429217712|ref|YP_007175702.1|	-	2.2e-10	39.9	0.2	5.1e-10	38.8	0.1	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
COXG	PF06240.8	gi|429217712|ref|YP_007175702.1|	-	0.033	13.8	0.2	1.9	8.1	0.0	2.5	2	0	0	2	2	2	0	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
TraC_F_IV	PF11130.3	gi|429217713|ref|YP_007175703.1|	-	0.057	12.8	0.0	0.062	12.7	0.0	1.1	1	0	0	1	1	1	0	F	pilus	assembly	Type-IV	secretion	system	for	plasmid	transfer
Glu-tRNAGln	PF02686.10	gi|429217713|ref|YP_007175703.1|	-	0.083	12.7	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Glu-tRNAGln	amidotransferase	C	subunit
SPOB_a	PF14689.1	gi|429217713|ref|YP_007175703.1|	-	0.17	11.4	0.7	0.27	10.8	0.5	1.3	1	0	0	1	1	1	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
Amidase	PF01425.16	gi|429217714|ref|YP_007175704.1|	-	6.3e-114	381.2	0.0	7.8e-114	380.9	0.0	1.0	1	0	0	1	1	1	1	Amidase
Kri1_C	PF12936.2	gi|429217714|ref|YP_007175704.1|	-	0.054	13.4	1.2	1.1	9.1	0.2	2.4	2	0	0	2	2	2	0	KRI1-like	family	C-terminal
ACOX	PF01756.14	gi|429217714|ref|YP_007175704.1|	-	0.12	11.6	0.3	0.26	10.6	0.2	1.4	1	0	0	1	1	1	0	Acyl-CoA	oxidase
GatB_N	PF02934.10	gi|429217715|ref|YP_007175705.1|	-	4.5e-93	311.2	0.0	6.3e-93	310.7	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|429217715|ref|YP_007175705.1|	-	4.5e-16	58.9	3.1	1e-15	57.7	2.1	1.6	1	1	0	1	1	1	1	GatB	domain
GCV_T	PF01571.16	gi|429217716|ref|YP_007175706.1|	-	9.9e-49	165.5	0.0	1.3e-48	165.1	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|429217716|ref|YP_007175706.1|	-	1.6e-16	60.0	0.0	3e-16	59.2	0.0	1.4	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
dTDP_sugar_isom	PF00908.12	gi|429217716|ref|YP_007175706.1|	-	0.007	15.7	0.0	0.011	15.0	0.0	1.2	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Rubrerythrin	PF02915.12	gi|429217717|ref|YP_007175707.1|	-	2.4e-28	99.1	5.7	2.8e-28	98.9	3.9	1.1	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|429217717|ref|YP_007175707.1|	-	1.7e-05	24.5	2.7	3e-05	23.8	1.9	1.4	1	1	0	1	1	1	1	Ferritin-like	domain
Arc_PepC_II	PF06847.6	gi|429217717|ref|YP_007175707.1|	-	0.0031	17.9	0.1	0.0075	16.6	0.0	1.6	2	0	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Cys_rich_CPCC	PF14206.1	gi|429217717|ref|YP_007175707.1|	-	0.014	14.9	1.3	0.026	14.0	0.9	1.4	1	0	0	1	1	1	0	Cysteine-rich	CPCC
Rubredoxin	PF00301.15	gi|429217717|ref|YP_007175707.1|	-	0.073	12.9	2.3	2.3	8.1	0.0	2.5	2	0	0	2	2	2	0	Rubredoxin
zf-C3HC4_3	PF13920.1	gi|429217717|ref|YP_007175707.1|	-	0.096	12.3	0.3	0.16	11.6	0.2	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Auto_anti-p27	PF06677.7	gi|429217717|ref|YP_007175707.1|	-	0.1	12.3	1.7	0.32	10.8	1.2	1.8	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-MIZ	PF02891.15	gi|429217717|ref|YP_007175707.1|	-	0.1	12.0	1.0	1.6	8.3	0.0	2.2	2	0	0	2	2	2	0	MIZ/SP-RING	zinc	finger
DNA_ligase_ZBD	PF03119.11	gi|429217717|ref|YP_007175707.1|	-	0.11	12.2	0.6	0.11	12.2	0.4	2.1	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
PhnA_Zn_Ribbon	PF08274.7	gi|429217717|ref|YP_007175707.1|	-	0.36	10.6	2.3	0.59	9.9	0.0	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-Sec23_Sec24	PF04810.10	gi|429217717|ref|YP_007175707.1|	-	0.97	9.0	3.7	1.5	8.4	0.1	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
Aldo_ket_red	PF00248.16	gi|429217718|ref|YP_007175708.1|	-	3.6e-63	213.0	0.1	4e-63	212.8	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
DUF2540	PF10802.3	gi|429217718|ref|YP_007175708.1|	-	0.054	13.1	0.5	0.21	11.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2540)
Tcf25	PF04910.9	gi|429217719|ref|YP_007175709.1|	-	0.031	13.2	0.1	0.042	12.8	0.0	1.1	1	0	0	1	1	1	0	Transcriptional	repressor	TCF25
RICH	PF05062.7	gi|429217719|ref|YP_007175709.1|	-	3.7	7.7	6.6	1.6	8.9	0.1	3.0	3	0	0	3	3	3	0	RICH	domain
ThiS	PF02597.15	gi|429217720|ref|YP_007175710.1|	-	8.4e-06	26.1	0.1	9.8e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
Ub-Mut7C	PF14451.1	gi|429217720|ref|YP_007175710.1|	-	0.019	14.4	0.1	0.073	12.6	0.0	1.8	2	0	0	2	2	2	0	Mut7-C	ubiquitin
GATase_4	PF13230.1	gi|429217720|ref|YP_007175710.1|	-	0.042	12.5	0.0	0.051	12.2	0.0	1.1	1	0	0	1	1	1	0	Glutamine	amidotransferases	class-II
ThiS-like	PF14453.1	gi|429217720|ref|YP_007175710.1|	-	0.065	13.0	0.8	0.13	12.1	0.5	1.5	1	0	0	1	1	1	0	ThiS-like	ubiquitin
DUF2577	PF10844.3	gi|429217720|ref|YP_007175710.1|	-	0.081	12.9	0.3	0.22	11.5	0.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2577)
DUF2067	PF09840.4	gi|429217720|ref|YP_007175710.1|	-	0.12	11.8	0.0	0.18	11.2	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
GHMP_kinases_N	PF00288.21	gi|429217721|ref|YP_007175711.1|	-	2.7e-18	65.7	1.6	2.7e-18	65.7	1.1	2.0	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|429217721|ref|YP_007175711.1|	-	3e-13	49.7	0.1	6.9e-13	48.6	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
ADP_ribosyl_GH	PF03747.9	gi|429217721|ref|YP_007175711.1|	-	0.0095	15.7	0.0	0.015	15.1	0.0	1.2	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
DUF4346	PF14251.1	gi|429217722|ref|YP_007175712.1|	-	1e-08	34.9	0.4	4e-08	33.0	0.2	2.1	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
ADH_N	PF08240.7	gi|429217723|ref|YP_007175713.1|	-	6.6e-28	96.6	0.2	1.3e-27	95.6	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|429217723|ref|YP_007175713.1|	-	6.9e-23	80.6	2.3	1e-22	80.0	0.5	1.9	1	1	1	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|429217723|ref|YP_007175713.1|	-	2.7e-11	44.4	0.0	5.9e-11	43.3	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|429217723|ref|YP_007175713.1|	-	0.00025	20.6	0.4	0.00045	19.8	0.3	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_10	PF13460.1	gi|429217723|ref|YP_007175713.1|	-	0.00035	20.6	0.5	0.00063	19.7	0.3	1.5	1	1	0	1	1	1	1	NADH(P)-binding
ELFV_dehydrog	PF00208.16	gi|429217723|ref|YP_007175713.1|	-	0.0015	18.1	0.2	0.0027	17.3	0.1	1.4	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|429217723|ref|YP_007175713.1|	-	0.02	14.0	0.1	0.041	13.0	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|429217723|ref|YP_007175713.1|	-	0.024	14.9	0.4	0.66	10.2	0.1	2.4	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
SIS_2	PF13580.1	gi|429217723|ref|YP_007175713.1|	-	0.055	13.1	1.1	0.18	11.5	0.2	2.2	2	0	0	2	2	2	0	SIS	domain
PALP	PF00291.20	gi|429217723|ref|YP_007175713.1|	-	0.059	12.5	0.3	0.11	11.6	0.2	1.4	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
TPM	PF04536.9	gi|429217723|ref|YP_007175713.1|	-	0.065	13.1	0.1	0.91	9.3	0.0	2.3	1	1	0	1	1	1	0	TLP18.3,	Psb32	and	MOLO-1	founding	proteins	of	phosphatase
DapB_N	PF01113.15	gi|429217723|ref|YP_007175713.1|	-	0.095	12.6	2.2	1.6	8.6	1.5	2.4	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
CBS	PF00571.23	gi|429217724|ref|YP_007175714.1|	-	1.9e-26	91.5	0.8	2.8e-07	30.2	0.1	4.0	4	0	0	4	4	4	3	CBS	domain
DEAD_assoc	PF08494.6	gi|429217725|ref|YP_007175715.1|	-	4.2e-59	199.4	0.0	9.1e-59	198.3	0.0	1.6	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|429217725|ref|YP_007175715.1|	-	1e-28	99.9	0.2	1.1e-27	96.5	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|429217725|ref|YP_007175715.1|	-	1.3e-14	53.7	0.0	4.4e-14	52.1	0.0	1.8	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|429217725|ref|YP_007175715.1|	-	3.4e-08	33.5	0.1	2.1e-07	30.9	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DUF4130	PF13566.1	gi|429217725|ref|YP_007175715.1|	-	0.028	13.9	0.0	0.064	12.8	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4130
Transketolase_C	PF02780.15	gi|429217725|ref|YP_007175715.1|	-	0.071	13.0	0.0	0.43	10.5	0.0	2.3	2	0	0	2	2	2	0	Transketolase,	C-terminal	domain
AAA_19	PF13245.1	gi|429217725|ref|YP_007175715.1|	-	0.1	12.3	0.0	3.6	7.3	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
ABC_tran	PF00005.22	gi|429217727|ref|YP_007175717.1|	-	2.5e-29	102.3	0.0	3.3e-29	101.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|429217727|ref|YP_007175717.1|	-	3.1e-14	53.6	1.1	5e-11	43.1	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|429217727|ref|YP_007175717.1|	-	0.00021	20.7	0.0	0.00036	19.9	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|429217727|ref|YP_007175717.1|	-	0.00025	21.4	1.6	0.00078	19.8	1.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|429217727|ref|YP_007175717.1|	-	0.00031	19.9	0.1	0.023	13.7	0.0	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
SRP54	PF00448.17	gi|429217727|ref|YP_007175717.1|	-	0.0096	15.3	0.0	0.017	14.5	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|429217727|ref|YP_007175717.1|	-	0.01	16.6	0.0	0.015	16.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|429217727|ref|YP_007175717.1|	-	0.012	15.7	0.2	0.038	14.1	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|429217727|ref|YP_007175717.1|	-	0.013	15.1	0.0	0.027	14.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|429217727|ref|YP_007175717.1|	-	0.014	15.4	0.4	0.045	13.8	0.3	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|429217727|ref|YP_007175717.1|	-	0.021	14.2	0.0	0.088	12.2	0.0	2.0	1	1	0	1	1	1	0	AAA-like	domain
AAA_19	PF13245.1	gi|429217727|ref|YP_007175717.1|	-	0.029	14.1	0.2	0.062	13.0	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF3584	PF12128.3	gi|429217727|ref|YP_007175717.1|	-	0.04	11.2	0.1	0.055	10.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_24	PF13479.1	gi|429217727|ref|YP_007175717.1|	-	0.056	13.0	0.0	0.089	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Ribosomal_L30	PF00327.15	gi|429217727|ref|YP_007175717.1|	-	0.069	12.7	0.0	0.15	11.6	0.0	1.5	1	0	0	1	1	1	0	Ribosomal	protein	L30p/L7e
FtsK_SpoIIIE	PF01580.13	gi|429217727|ref|YP_007175717.1|	-	0.093	12.1	0.0	0.15	11.5	0.0	1.6	1	1	0	1	1	1	0	FtsK/SpoIIIE	family
SMC_N	PF02463.14	gi|429217727|ref|YP_007175717.1|	-	0.11	11.7	0.4	4.1	6.5	0.0	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Creatininase	PF02633.9	gi|429217728|ref|YP_007175718.1|	-	5.8e-35	120.4	0.0	7.1e-35	120.2	0.0	1.1	1	0	0	1	1	1	1	Creatinine	amidohydrolase
FAA_hydrolase	PF01557.13	gi|429217729|ref|YP_007175719.1|	-	2.1e-55	187.5	0.0	2.6e-55	187.2	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
SNARE_assoc	PF09335.6	gi|429217730|ref|YP_007175720.1|	-	2.7e-20	72.8	4.8	2.7e-20	72.8	3.3	1.8	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
Spore_III_AB	PF09548.5	gi|429217731|ref|YP_007175721.1|	-	0.002	17.8	0.6	0.0029	17.3	0.2	1.4	1	1	0	1	1	1	1	Stage	III	sporulation	protein	AB	(spore_III_AB)
RHH_1	PF01402.16	gi|429217731|ref|YP_007175721.1|	-	0.0087	15.9	0.0	0.02	14.7	0.0	1.6	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF2453	PF10507.4	gi|429217732|ref|YP_007175722.1|	-	0.083	12.6	2.2	0.079	12.7	0.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2453)
SBF	PF01758.11	gi|429217732|ref|YP_007175722.1|	-	0.47	9.8	7.9	1.6	8.1	5.4	1.7	1	1	0	1	1	1	0	Sodium	Bile	acid	symporter	family
Yip1	PF04893.12	gi|429217732|ref|YP_007175722.1|	-	1.4	8.4	8.2	3.6	7.0	5.7	1.7	1	1	0	1	1	1	0	Yip1	domain
DUF340	PF03956.8	gi|429217733|ref|YP_007175723.1|	-	1.2e-42	145.3	18.5	1.4e-42	145.1	12.8	1.0	1	0	0	1	1	1	1	Membrane	protein	of	unknown	function	(DUF340)
Sulfate_tra_GLY	PF13792.1	gi|429217733|ref|YP_007175723.1|	-	0.87	9.3	6.3	4.5	6.9	0.3	2.9	3	0	0	3	3	3	0	Sulfate	transporter	N-terminal	domain	with	GLY	motif