#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|332795694|ref|YP_004457194.1|	-	1e-14	54.0	0.0	2.2e-14	52.9	0.0	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|332795694|ref|YP_004457194.1|	-	1.3e-09	38.3	0.0	5e-09	36.3	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|332795694|ref|YP_004457194.1|	-	2.4e-08	34.2	0.1	7.6e-08	32.6	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|332795694|ref|YP_004457194.1|	-	0.00036	19.4	0.0	0.0006	18.7	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
KNOX1	PF03790.8	gi|332795694|ref|YP_004457194.1|	-	0.00055	19.2	0.1	0.0019	17.5	0.0	2.0	2	0	0	2	2	2	1	KNOX1	domain
Arch_ATPase	PF01637.13	gi|332795694|ref|YP_004457194.1|	-	0.0017	18.1	0.9	0.0049	16.6	0.6	1.7	1	0	0	1	1	1	1	Archaeal	ATPase
DUF2075	PF09848.4	gi|332795694|ref|YP_004457194.1|	-	0.0026	16.7	0.0	0.0038	16.2	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_16	PF13191.1	gi|332795694|ref|YP_004457194.1|	-	0.0027	17.7	0.0	0.0057	16.6	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF87	PF01935.12	gi|332795694|ref|YP_004457194.1|	-	0.0032	17.3	0.0	0.01	15.6	0.0	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
PIN_4	PF13638.1	gi|332795694|ref|YP_004457194.1|	-	0.069	13.2	0.1	0.18	11.9	0.1	1.6	1	0	0	1	1	1	0	PIN	domain
Vac_Fusion	PF02346.11	gi|332795695|ref|YP_004457195.1|	-	0.0024	17.2	4.7	0.1	12.0	0.2	2.3	2	0	0	2	2	2	2	Chordopoxvirus	fusion	protein
bZIP_1	PF00170.16	gi|332795695|ref|YP_004457195.1|	-	0.0049	16.8	12.2	0.024	14.5	1.2	2.5	2	1	0	2	2	2	2	bZIP	transcription	factor
Topoisom_I	PF01028.15	gi|332795695|ref|YP_004457195.1|	-	0.016	14.3	1.4	0.024	13.7	1.0	1.5	1	1	0	1	1	1	0	Eukaryotic	DNA	topoisomerase	I,	catalytic	core
DUF904	PF06005.7	gi|332795695|ref|YP_004457195.1|	-	0.029	14.6	1.2	0.029	14.6	0.8	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DUF964	PF06133.6	gi|332795695|ref|YP_004457195.1|	-	0.04	13.9	5.1	0.1	12.6	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF964)
DivIC	PF04977.10	gi|332795695|ref|YP_004457195.1|	-	0.043	13.3	1.3	0.043	13.3	0.9	2.3	2	1	0	2	2	2	0	Septum	formation	initiator
Snapin_Pallidin	PF14712.1	gi|332795695|ref|YP_004457195.1|	-	0.086	13.1	5.4	0.41	10.9	0.1	2.2	2	0	0	2	2	2	0	Snapin/Pallidin
LUC7	PF03194.10	gi|332795695|ref|YP_004457195.1|	-	0.13	11.7	2.7	0.18	11.3	1.9	1.1	1	0	0	1	1	1	0	LUC7	N_terminus
Plasmodium_Vir	PF05795.6	gi|332795695|ref|YP_004457195.1|	-	0.2	10.8	5.7	0.21	10.7	4.0	1.1	1	0	0	1	1	1	0	Plasmodium	vivax	Vir	protein
DUF4164	PF13747.1	gi|332795695|ref|YP_004457195.1|	-	0.84	9.8	7.7	5.7	7.1	0.6	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
Med4	PF10018.4	gi|332795695|ref|YP_004457195.1|	-	1.1	8.5	5.6	0.27	10.5	0.7	1.9	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Seryl_tRNA_N	PF02403.17	gi|332795695|ref|YP_004457195.1|	-	1.2	9.1	8.7	5.6	7.0	0.4	2.1	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF4140	PF13600.1	gi|332795695|ref|YP_004457195.1|	-	1.3	9.5	4.1	3.5	8.1	0.2	2.1	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Toxin_52	PF15605.1	gi|332795695|ref|YP_004457195.1|	-	1.4	8.8	4.4	15	5.4	0.6	2.1	1	1	0	2	2	2	0	Putative	toxin	52
DUF4201	PF13870.1	gi|332795695|ref|YP_004457195.1|	-	1.8	7.9	14.3	4.8	6.5	3.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
ERp29	PF07749.7	gi|332795695|ref|YP_004457195.1|	-	2.1	9.0	8.8	2.1	9.0	2.6	2.0	1	1	1	2	2	2	0	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
DUF2762	PF10960.3	gi|332795695|ref|YP_004457195.1|	-	2.5	7.8	6.9	0.92	9.2	1.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2762)
HOOK	PF05622.7	gi|332795695|ref|YP_004457195.1|	-	2.9	5.5	12.1	6.6	4.4	1.7	2.0	1	1	0	1	1	1	0	HOOK	protein
DUF3375	PF11855.3	gi|332795695|ref|YP_004457195.1|	-	3.3	6.3	7.3	3.3	6.3	0.5	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3375)
Rootletin	PF15035.1	gi|332795695|ref|YP_004457195.1|	-	3.5	7.5	9.5	17	5.3	5.4	2.0	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
DUF972	PF06156.8	gi|332795695|ref|YP_004457195.1|	-	3.6	7.9	9.1	5.2	7.4	0.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
OmpH	PF03938.9	gi|332795695|ref|YP_004457195.1|	-	4	7.3	6.0	10	6.0	4.2	1.6	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF1640	PF07798.6	gi|332795695|ref|YP_004457195.1|	-	4.8	7.2	8.7	12	5.8	0.5	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1640)
DUF3166	PF11365.3	gi|332795695|ref|YP_004457195.1|	-	5.3	7.5	9.4	4.8	7.7	0.4	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3166)
Tropomyosin_1	PF12718.2	gi|332795695|ref|YP_004457195.1|	-	7	6.4	14.4	59	3.5	10.0	1.9	1	1	0	1	1	1	0	Tropomyosin	like
DUF342	PF03961.8	gi|332795695|ref|YP_004457195.1|	-	9.3	4.5	10.0	44	2.3	6.9	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Pterin_4a	PF01329.14	gi|332795696|ref|YP_004457196.1|	-	5.4e-30	102.9	0.1	5.9e-30	102.8	0.1	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
PYST-C1	PF09690.5	gi|332795696|ref|YP_004457196.1|	-	0.73	9.5	3.4	1.1	8.9	2.4	1.3	1	0	0	1	1	1	0	Plasmodium	yoelii	subtelomeric	region	(PYST-C1)
AIG2	PF06094.7	gi|332795697|ref|YP_004457197.1|	-	6e-22	78.0	4.1	6.8e-15	55.4	0.3	2.2	2	0	0	2	2	2	2	AIG2-like	family
AIG2_2	PF13772.1	gi|332795697|ref|YP_004457197.1|	-	3.4e-12	46.3	1.8	3.3e-08	33.5	0.1	2.2	2	0	0	2	2	2	2	AIG2-like	family
Head-tail_con	PF12236.3	gi|332795698|ref|YP_004457198.1|	-	0.014	13.8	0.0	0.014	13.8	0.0	1.1	1	0	0	1	1	1	0	Bacteriophage	head	to	tail	connecting	protein
Toxin_R_bind_C	PF07951.7	gi|332795698|ref|YP_004457198.1|	-	0.029	14.0	0.3	0.031	13.9	0.2	1.0	1	0	0	1	1	1	0	Clostridium	neurotoxin,	C-terminal	receptor	binding
Lipoprotein_17	PF04200.7	gi|332795698|ref|YP_004457198.1|	-	0.13	12.4	1.1	0.16	12.1	0.7	1.2	1	0	0	1	1	1	0	Lipoprotein	associated	domain
NfeD	PF01957.13	gi|332795699|ref|YP_004457199.1|	-	4e-17	62.6	1.8	8.3e-17	61.6	1.3	1.5	1	1	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
RELT	PF12606.3	gi|332795699|ref|YP_004457199.1|	-	4.2	6.5	8.4	11	5.2	5.8	1.7	1	0	0	1	1	1	0	Tumour	necrosis	factor	receptor	superfamily	member	19
Thermopsin	PF05317.6	gi|332795700|ref|YP_004457200.1|	-	2.4e-48	164.3	8.7	2.4e-48	164.3	6.1	1.9	2	0	0	2	2	2	1	Thermopsin
Strep_pep	PF14404.1	gi|332795700|ref|YP_004457200.1|	-	0.16	12.2	0.0	0.35	11.1	0.0	1.5	1	0	0	1	1	1	0	Ribosomally	synthesized	peptide	in	Streptomyces	species
Band_7	PF01145.20	gi|332795701|ref|YP_004457201.1|	-	9.3e-39	133.1	1.8	1.5e-38	132.5	1.3	1.3	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|332795701|ref|YP_004457201.1|	-	0.013	15.0	0.1	0.038	13.4	0.1	1.7	2	0	0	2	2	2	0	SPFH	domain-Band	7	family
CitX	PF03802.9	gi|332795701|ref|YP_004457201.1|	-	0.057	12.8	0.2	0.083	12.3	0.1	1.3	1	0	0	1	1	1	0	Apo-citrate	lyase	phosphoribosyl-dephospho-CoA	transferase
DUF4315	PF14193.1	gi|332795701|ref|YP_004457201.1|	-	0.13	12.1	0.9	0.22	11.4	0.6	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4315)
Rhodanese	PF00581.15	gi|332795702|ref|YP_004457202.1|	-	7.6e-12	45.5	0.0	1.1e-11	45.0	0.0	1.2	1	0	0	1	1	1	1	Rhodanese-like	domain
DUF2203	PF09969.4	gi|332795703|ref|YP_004457203.1|	-	1.8e-34	118.5	0.0	2.4e-34	118.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2203)
DUF4342	PF14242.1	gi|332795703|ref|YP_004457203.1|	-	0.019	14.7	1.3	4	7.2	0.2	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4342)
DUF964	PF06133.6	gi|332795703|ref|YP_004457203.1|	-	0.039	13.9	0.2	0.051	13.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF964)
Fer4_2	PF12797.2	gi|332795704|ref|YP_004457204.1|	-	1.2e-06	28.0	13.0	0.00043	20.0	2.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|332795704|ref|YP_004457204.1|	-	4.3e-06	26.9	12.3	1.2e-05	25.4	8.3	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332795704|ref|YP_004457204.1|	-	5.9e-06	26.5	11.9	0.00011	22.5	0.8	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332795704|ref|YP_004457204.1|	-	6.3e-06	25.8	12.8	2.3e-05	24.0	1.8	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|332795704|ref|YP_004457204.1|	-	1.6e-05	24.2	2.6	1.6e-05	24.2	1.8	2.6	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|332795704|ref|YP_004457204.1|	-	1.9e-05	24.3	23.8	0.00047	19.8	9.6	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332795704|ref|YP_004457204.1|	-	4.4e-05	23.4	5.6	0.009	16.0	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|332795704|ref|YP_004457204.1|	-	0.00043	20.3	15.1	0.0089	16.2	2.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332795704|ref|YP_004457204.1|	-	0.0051	17.2	1.2	0.0051	17.2	0.8	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332795704|ref|YP_004457204.1|	-	0.0057	17.1	5.3	0.0057	17.1	3.7	2.7	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|332795704|ref|YP_004457204.1|	-	0.0078	16.0	4.7	0.015	15.1	3.3	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332795704|ref|YP_004457204.1|	-	0.013	15.8	0.6	0.013	15.8	0.4	2.6	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332795704|ref|YP_004457204.1|	-	0.1	12.4	12.8	0.029	14.2	1.2	2.2	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|332795704|ref|YP_004457204.1|	-	0.46	11.0	7.8	0.1	13.2	0.6	2.2	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|332795704|ref|YP_004457204.1|	-	0.5	11.1	14.2	0.13	12.9	1.6	2.4	1	1	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Peptidase_M1	PF01433.15	gi|332795706|ref|YP_004457206.1|	-	1.3e-106	356.9	1.0	1.9e-106	356.4	0.7	1.3	1	0	0	1	1	1	1	Peptidase	family	M1
ERAP1_C	PF11838.3	gi|332795706|ref|YP_004457206.1|	-	6.5e-21	74.9	0.0	2.1e-20	73.2	0.0	1.8	1	1	0	1	1	1	1	ERAP1-like	C-terminal	domain
Peptidase_MA_2	PF13485.1	gi|332795706|ref|YP_004457206.1|	-	1.7e-18	66.9	2.5	1.7e-18	66.9	0.9	1.6	2	0	0	2	2	2	1	Peptidase	MA	superfamily
PLDc_2	PF13091.1	gi|332795707|ref|YP_004457207.1|	-	1.1e-05	25.2	0.6	1.1e-05	25.2	0.4	1.8	2	1	0	2	2	2	1	PLD-like	domain
DUF2207	PF09972.4	gi|332795707|ref|YP_004457207.1|	-	0.0031	16.1	6.5	0.0036	15.9	4.5	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
Wzy_C	PF04932.10	gi|332795707|ref|YP_004457207.1|	-	0.055	13.2	7.1	0.079	12.7	4.9	1.3	1	0	0	1	1	1	0	O-Antigen	ligase
MSC	PF09402.5	gi|332795707|ref|YP_004457207.1|	-	1.5	7.4	13.3	15	4.1	9.2	2.1	1	1	0	1	1	1	0	Man1-Src1p-C-terminal	domain
Radical_SAM	PF04055.16	gi|332795708|ref|YP_004457208.1|	-	1.8e-14	54.2	0.9	7.8e-14	52.1	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332795708|ref|YP_004457208.1|	-	6.9e-11	42.4	0.0	6.9e-11	42.4	0.0	2.0	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|332795708|ref|YP_004457208.1|	-	3.9e-08	33.3	0.0	9.1e-08	32.1	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|332795708|ref|YP_004457208.1|	-	0.019	15.2	0.2	0.067	13.5	0.1	2.1	1	1	0	1	1	1	0	Iron-sulfur	cluster-binding	domain
RPEL	PF02755.10	gi|332795708|ref|YP_004457208.1|	-	0.11	11.8	0.1	0.21	10.9	0.1	1.5	1	0	0	1	1	1	0	RPEL	repeat
Glycos_transf_2	PF00535.21	gi|332795710|ref|YP_004457210.1|	-	3.7e-14	52.7	0.0	5.6e-14	52.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|332795710|ref|YP_004457210.1|	-	2.6e-12	46.3	0.0	3.6e-12	45.9	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_3	PF13641.1	gi|332795710|ref|YP_004457210.1|	-	1.3e-11	44.7	0.0	2e-11	44.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
TENA_THI-4	PF03070.11	gi|332795712|ref|YP_004457212.1|	-	2.1e-33	115.8	4.3	2.5e-33	115.6	3.0	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Proho_convert	PF12177.3	gi|332795712|ref|YP_004457212.1|	-	0.043	13.3	0.0	0.097	12.2	0.0	1.6	1	0	0	1	1	1	0	Prohormone	convertase	enzyme
adh_short_C2	PF13561.1	gi|332795713|ref|YP_004457213.1|	-	3e-17	63.2	0.1	7.6e-17	61.8	0.1	1.6	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|332795713|ref|YP_004457213.1|	-	2.1e-13	50.4	0.0	2.7e-13	50.1	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
THF_DHG_CYH_C	PF02882.14	gi|332795713|ref|YP_004457213.1|	-	0.0061	15.6	0.0	0.014	14.4	0.0	1.6	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
KR	PF08659.5	gi|332795713|ref|YP_004457213.1|	-	0.0073	15.9	0.0	0.013	15.2	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_7	PF13241.1	gi|332795713|ref|YP_004457213.1|	-	0.068	13.4	0.1	0.22	11.8	0.0	1.9	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Shikimate_DH	PF01488.15	gi|332795713|ref|YP_004457213.1|	-	0.087	12.9	0.2	0.2	11.7	0.1	1.7	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_10	PF13460.1	gi|332795713|ref|YP_004457213.1|	-	0.11	12.5	0.0	0.28	11.1	0.0	1.8	1	1	0	1	1	1	0	NADH(P)-binding
Thioredox_DsbH	PF03190.10	gi|332795714|ref|YP_004457214.1|	-	2e-62	209.7	0.1	3.2e-62	209.0	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|332795714|ref|YP_004457214.1|	-	2.1e-16	59.7	0.1	5.2e-16	58.4	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin	PF00085.15	gi|332795714|ref|YP_004457214.1|	-	6.8e-06	25.7	0.5	1.8e-05	24.3	0.4	1.6	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|332795714|ref|YP_004457214.1|	-	2.1e-05	24.6	0.1	6.3e-05	23.1	0.1	1.8	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF87	PF01935.12	gi|332795718|ref|YP_004457218.1|	-	2.7e-41	141.8	1.3	4.5e-41	141.1	0.9	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|332795718|ref|YP_004457218.1|	-	1e-11	44.8	0.3	2.3e-09	37.1	0.2	2.4	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|332795718|ref|YP_004457218.1|	-	0.00016	21.2	0.0	0.0013	18.2	0.0	2.0	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|332795718|ref|YP_004457218.1|	-	0.0083	14.7	0.0	0.043	12.4	0.0	2.0	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.1	gi|332795718|ref|YP_004457218.1|	-	0.067	13.3	0.0	1	9.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
KAP_NTPase	PF07693.9	gi|332795719|ref|YP_004457219.1|	-	7.2e-05	21.9	1.1	0.00051	19.1	0.0	2.5	2	0	0	2	2	2	1	KAP	family	P-loop	domain
CARD	PF00619.16	gi|332795719|ref|YP_004457219.1|	-	0.043	13.6	0.3	0.27	11.0	0.2	2.4	2	0	0	2	2	2	0	Caspase	recruitment	domain
DASH_Duo1	PF08651.5	gi|332795719|ref|YP_004457219.1|	-	2.6	7.7	8.4	3.1	7.4	0.7	3.8	4	0	0	4	4	4	0	DASH	complex	subunit	Duo1
Latarcin	PF10279.4	gi|332795720|ref|YP_004457220.1|	-	0.00016	21.7	0.0	0.00038	20.5	0.0	1.8	1	1	0	1	1	1	1	Latarcin	precursor
NRN1	PF15056.1	gi|332795720|ref|YP_004457220.1|	-	0.081	12.8	1.7	4.1	7.4	0.0	3.0	3	0	0	3	3	3	0	Neuritin	protein	family
Fib_alpha	PF08702.5	gi|332795720|ref|YP_004457220.1|	-	0.15	12.1	17.1	0.95	9.5	4.1	2.6	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
p450	PF00067.17	gi|332795720|ref|YP_004457220.1|	-	0.23	9.9	3.3	0.12	10.8	0.7	1.6	1	1	1	2	2	2	0	Cytochrome	P450
YqgF	PF14639.1	gi|332795720|ref|YP_004457220.1|	-	0.25	10.9	2.2	2.6	7.5	0.1	2.6	1	1	1	2	2	2	0	Holliday-junction	resolvase-like	of	SPT6
Vma12	PF11712.3	gi|332795720|ref|YP_004457220.1|	-	0.4	10.3	7.6	0.037	13.7	1.9	1.8	2	0	0	2	2	2	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
COG5	PF10392.4	gi|332795720|ref|YP_004457220.1|	-	0.43	10.5	7.2	1.5	8.7	0.5	2.9	2	1	1	3	3	3	0	Golgi	transport	complex	subunit	5
Thy1	PF02511.10	gi|332795720|ref|YP_004457220.1|	-	1.2	8.4	6.0	13	5.0	4.2	2.1	1	1	0	1	1	1	0	Thymidylate	synthase	complementing	protein
YtxH	PF12732.2	gi|332795720|ref|YP_004457220.1|	-	4.1	7.8	6.3	8	6.9	0.3	2.7	2	1	0	2	2	2	0	YtxH-like	protein
Aida_N	PF08910.5	gi|332795720|ref|YP_004457220.1|	-	5.4	7.3	10.4	1.6	8.9	0.5	2.5	3	0	0	3	3	3	0	Aida	N-terminus
SecA_DEAD	PF07517.9	gi|332795720|ref|YP_004457220.1|	-	8.1	5.6	8.6	2.5	7.3	1.0	2.6	1	1	1	2	2	2	0	SecA	DEAD-like	domain
NurA	PF09376.5	gi|332795721|ref|YP_004457221.1|	-	2.2e-12	46.9	0.6	3e-12	46.5	0.4	1.2	1	0	0	1	1	1	1	NurA	domain
Nol1_Nop2_Fmu	PF01189.12	gi|332795722|ref|YP_004457222.1|	-	6e-29	101.3	0.0	7.9e-29	100.9	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|332795722|ref|YP_004457222.1|	-	3.9e-10	39.5	0.0	8.1e-10	38.4	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|332795722|ref|YP_004457222.1|	-	1.6e-05	24.5	0.0	2.5e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|332795722|ref|YP_004457222.1|	-	0.0018	17.7	0.0	0.0032	16.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
DUF2540	PF10802.3	gi|332795722|ref|YP_004457222.1|	-	0.0018	17.8	0.6	0.0098	15.5	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2540)
Methyltransf_11	PF08241.7	gi|332795722|ref|YP_004457222.1|	-	0.0026	18.2	0.0	0.0067	16.8	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|332795722|ref|YP_004457222.1|	-	0.011	14.8	0.0	0.017	14.2	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_4	PF02390.12	gi|332795722|ref|YP_004457222.1|	-	0.019	14.0	0.0	0.033	13.2	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_24	PF13578.1	gi|332795722|ref|YP_004457222.1|	-	0.12	13.1	0.0	0.27	12.0	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Glycos_transf_1	PF00534.15	gi|332795723|ref|YP_004457223.1|	-	3.5e-23	81.8	0.0	5.2e-23	81.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|332795723|ref|YP_004457223.1|	-	3.9e-06	27.0	0.0	7e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|332795723|ref|YP_004457223.1|	-	0.0004	20.5	0.0	0.00071	19.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF3740	PF12548.3	gi|332795725|ref|YP_004457225.1|	-	0.053	13.8	0.1	0.12	12.6	0.0	1.6	2	0	0	2	2	2	0	Sulfatase	protein
Rdx	PF10262.4	gi|332795726|ref|YP_004457226.1|	-	7.9e-20	70.6	0.0	9.8e-20	70.3	0.0	1.0	1	0	0	1	1	1	1	Rdx	family
DinI	PF06183.8	gi|332795726|ref|YP_004457226.1|	-	0.15	12.1	0.1	0.68	9.9	0.0	1.9	2	0	0	2	2	2	0	DinI-like	family
COX1	PF00115.15	gi|332795727|ref|YP_004457227.1|	-	7.3e-64	216.0	58.8	7.3e-64	216.0	40.7	1.7	1	1	1	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
ECH	PF00378.15	gi|332795728|ref|YP_004457228.1|	-	3.4e-38	131.1	0.0	4e-38	130.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Myosin_TH1	PF06017.8	gi|332795728|ref|YP_004457228.1|	-	0.13	11.5	0.7	0.84	8.9	0.1	2.1	2	0	0	2	2	2	0	Myosin	tail
ABC2_membrane_3	PF12698.2	gi|332795729|ref|YP_004457229.1|	-	7.1e-13	48.3	35.5	9.4e-13	47.8	24.6	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|332795729|ref|YP_004457229.1|	-	2.8e-10	39.7	27.1	2.8e-10	39.7	18.8	2.5	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC_tran	PF00005.22	gi|332795730|ref|YP_004457230.1|	-	5.3e-34	117.4	0.0	9e-34	116.7	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332795730|ref|YP_004457230.1|	-	5.2e-18	66.0	0.0	9e-16	58.6	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|332795730|ref|YP_004457230.1|	-	4.9e-07	29.1	0.3	0.00069	18.7	0.0	2.5	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|332795730|ref|YP_004457230.1|	-	6.4e-05	22.2	0.2	0.14	11.3	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|332795730|ref|YP_004457230.1|	-	0.00024	21.5	3.4	0.0012	19.2	2.4	2.0	1	1	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|332795730|ref|YP_004457230.1|	-	0.0022	17.8	0.0	0.026	14.4	0.0	2.5	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.1	gi|332795730|ref|YP_004457230.1|	-	0.0094	15.4	0.1	0.019	14.4	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|332795730|ref|YP_004457230.1|	-	0.015	15.5	0.1	0.069	13.3	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|332795730|ref|YP_004457230.1|	-	0.026	13.6	0.0	0.037	13.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|332795730|ref|YP_004457230.1|	-	0.038	12.6	0.0	0.044	12.4	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
SRP54	PF00448.17	gi|332795730|ref|YP_004457230.1|	-	0.04	13.3	0.1	0.069	12.5	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_13	PF13166.1	gi|332795730|ref|YP_004457230.1|	-	0.053	11.9	0.0	0.28	9.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|332795730|ref|YP_004457230.1|	-	0.063	13.4	0.8	0.73	9.9	0.5	2.6	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|332795730|ref|YP_004457230.1|	-	0.079	12.9	0.0	0.1	12.5	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_14	PF13173.1	gi|332795730|ref|YP_004457230.1|	-	0.11	12.3	0.1	13	5.7	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
AIRS_C	PF02769.17	gi|332795731|ref|YP_004457231.1|	-	1.7e-14	54.1	0.1	2.4e-14	53.6	0.1	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|332795731|ref|YP_004457231.1|	-	6.3e-10	39.1	0.0	1.9e-09	37.6	0.0	1.9	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
ATP-synt_ab_N	PF02874.18	gi|332795731|ref|YP_004457231.1|	-	0.0087	16.2	0.0	0.027	14.6	0.0	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
Tegument_dsDNA	PF12818.2	gi|332795731|ref|YP_004457231.1|	-	0.022	13.6	0.1	3.3	6.4	0.0	2.2	2	0	0	2	2	2	0	dsDNA	viral	tegument	protein
NTP_transf_3	PF12804.2	gi|332795732|ref|YP_004457232.1|	-	3.3e-11	43.5	0.0	6e-11	42.6	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
NTP_transferase	PF00483.18	gi|332795732|ref|YP_004457232.1|	-	0.0034	16.7	0.0	0.0048	16.2	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
CTP_transf_3	PF02348.14	gi|332795732|ref|YP_004457232.1|	-	0.048	13.2	0.0	0.14	11.7	0.0	1.7	2	0	0	2	2	2	0	Cytidylyltransferase
DUF1614	PF07758.6	gi|332795733|ref|YP_004457233.1|	-	5.4e-48	163.0	8.2	7.9e-48	162.4	5.7	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
CcmE	PF03100.10	gi|332795734|ref|YP_004457234.1|	-	0.096	12.2	0.0	0.15	11.6	0.0	1.4	1	1	0	1	1	1	0	CcmE
RRM_6	PF14259.1	gi|332795734|ref|YP_004457234.1|	-	0.14	12.2	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	RNA	recognition	motif	(a.k.a.	RRM,	RBD,	or	RNP	domain)
Aldolase_2	PF10120.4	gi|332795735|ref|YP_004457235.1|	-	2.5e-60	202.7	0.1	2.8e-60	202.5	0.1	1.0	1	0	0	1	1	1	1	Putative	aldolase
PadR	PF03551.9	gi|332795736|ref|YP_004457236.1|	-	7.1e-19	67.3	0.0	1.3e-18	66.5	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF4364	PF14277.1	gi|332795736|ref|YP_004457236.1|	-	1.7e-05	24.5	4.3	2.4e-05	23.9	0.4	2.6	2	1	0	3	3	3	1	Domain	of	unknown	function	(DUF4364)
HTH_34	PF13601.1	gi|332795736|ref|YP_004457236.1|	-	0.00013	21.9	0.0	0.00027	20.8	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|332795736|ref|YP_004457236.1|	-	0.00032	20.4	1.0	0.00032	20.4	0.7	2.4	1	1	1	2	2	2	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|332795736|ref|YP_004457236.1|	-	0.00043	20.5	0.0	0.0014	18.9	0.0	1.9	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|332795736|ref|YP_004457236.1|	-	0.00057	19.9	0.1	0.0083	16.2	0.1	2.3	1	1	1	2	2	2	1	Penicillinase	repressor
Stork_head	PF10264.4	gi|332795736|ref|YP_004457236.1|	-	0.0062	16.6	0.0	0.015	15.4	0.0	1.7	1	1	0	1	1	1	1	Winged	helix	Storkhead-box1	domain
TUDOR	PF00567.19	gi|332795736|ref|YP_004457236.1|	-	0.0098	15.7	0.8	0.029	14.1	0.1	1.9	1	1	1	2	2	2	1	Tudor	domain
Stn1_C	PF12659.2	gi|332795736|ref|YP_004457236.1|	-	0.011	15.5	0.5	3.2	7.5	0.0	2.4	1	1	1	2	2	2	0	Telomere	capping	C-terminal	wHTH
AphA_like	PF14557.1	gi|332795736|ref|YP_004457236.1|	-	0.012	15.1	0.0	0.015	14.8	0.0	1.1	1	0	0	1	1	1	0	Putative	AphA-like	transcriptional	regulator
TrmB	PF01978.14	gi|332795736|ref|YP_004457236.1|	-	0.015	15.0	0.4	0.1	12.3	0.1	2.5	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF3116	PF11313.3	gi|332795736|ref|YP_004457236.1|	-	0.015	14.9	0.3	0.038	13.5	0.0	1.8	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF3116)
O-FucT	PF10250.4	gi|332795736|ref|YP_004457236.1|	-	0.018	14.1	0.0	0.024	13.7	0.0	1.2	1	0	0	1	1	1	0	GDP-fucose	protein	O-fucosyltransferase
CDC37_C	PF08564.5	gi|332795736|ref|YP_004457236.1|	-	0.021	14.6	2.7	0.29	10.9	0.5	2.7	1	1	0	2	2	2	0	Cdc37	C	terminal	domain
DUF1495	PF07381.6	gi|332795736|ref|YP_004457236.1|	-	0.022	14.3	0.2	0.11	12.1	0.0	2.2	1	1	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
Ribosomal_L28e	PF01778.12	gi|332795736|ref|YP_004457236.1|	-	0.025	14.9	0.1	0.033	14.6	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	L28e	protein	family
FUR	PF01475.14	gi|332795736|ref|YP_004457236.1|	-	0.038	13.9	0.1	0.13	12.1	0.0	1.8	1	1	0	1	1	1	0	Ferric	uptake	regulator	family
Ter	PF05472.6	gi|332795736|ref|YP_004457236.1|	-	0.048	12.7	1.3	0.061	12.4	0.9	1.1	1	0	0	1	1	1	0	DNA	replication	terminus	site-binding	protein	(Ter	protein)
DUF3782	PF12644.2	gi|332795736|ref|YP_004457236.1|	-	0.05	13.3	0.0	0.38	10.5	0.0	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
Uso1_p115_C	PF04871.8	gi|332795736|ref|YP_004457236.1|	-	0.062	13.2	1.6	0.09	12.7	1.1	1.3	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
PipA	PF07108.6	gi|332795736|ref|YP_004457236.1|	-	0.068	12.5	0.8	0.14	11.4	0.1	1.7	1	1	1	2	2	2	0	PipA	protein
Phe_tRNA-synt_N	PF02912.13	gi|332795736|ref|YP_004457236.1|	-	0.11	12.2	3.3	0.16	11.7	0.2	2.4	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
DUF2209	PF09974.4	gi|332795736|ref|YP_004457236.1|	-	0.12	12.4	1.2	0.49	10.4	0.3	2.1	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2209)
Mrr_N	PF14338.1	gi|332795736|ref|YP_004457236.1|	-	0.14	12.3	0.5	6.6	6.8	0.0	2.7	3	0	0	3	3	3	0	Mrr	N-terminal	domain
DUF4423	PF14394.1	gi|332795736|ref|YP_004457236.1|	-	0.38	10.2	2.9	0.33	10.4	0.2	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
BRE1	PF08647.6	gi|332795736|ref|YP_004457236.1|	-	0.52	10.3	4.3	1.5	8.8	3.0	1.8	1	1	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
DegS	PF05384.6	gi|332795736|ref|YP_004457236.1|	-	0.64	9.2	5.7	0.42	9.8	0.9	2.1	1	1	1	2	2	2	0	Sensor	protein	DegS
CARD	PF00619.16	gi|332795736|ref|YP_004457236.1|	-	0.67	9.8	2.9	5.7	6.8	0.5	3.0	1	1	2	3	3	3	0	Caspase	recruitment	domain
DUF4473	PF14747.1	gi|332795736|ref|YP_004457236.1|	-	0.91	9.7	5.8	39	4.5	4.0	2.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
Pyr_redox_2	PF07992.9	gi|332795737|ref|YP_004457237.1|	-	4.8e-15	55.9	0.0	8.6e-15	55.1	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332795737|ref|YP_004457237.1|	-	1.2e-07	32.0	0.2	0.0062	16.9	0.0	2.7	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|332795737|ref|YP_004457237.1|	-	9e-07	27.8	0.5	3.7e-05	22.5	0.1	2.4	3	0	0	3	3	3	1	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|332795737|ref|YP_004457237.1|	-	1.1e-06	28.4	0.1	0.0069	16.1	0.0	2.5	2	0	0	2	2	2	2	FAD-NAD(P)-binding
DAO	PF01266.19	gi|332795737|ref|YP_004457237.1|	-	1.9e-06	27.0	0.0	0.001	18.0	0.0	3.0	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332795737|ref|YP_004457237.1|	-	8.3e-05	22.7	0.0	0.81	9.7	0.0	3.1	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|332795737|ref|YP_004457237.1|	-	0.00012	21.1	0.0	0.0025	16.7	0.0	2.3	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_7	PF13241.1	gi|332795737|ref|YP_004457237.1|	-	0.00034	20.8	0.1	0.00091	19.4	0.1	1.8	1	0	0	1	1	1	1	Putative	NAD(P)-binding
PTS_IIB	PF02302.12	gi|332795737|ref|YP_004457237.1|	-	0.00049	20.5	0.5	0.92	10.0	0.0	2.8	3	0	0	3	3	3	2	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
Thi4	PF01946.12	gi|332795737|ref|YP_004457237.1|	-	0.0038	16.3	0.0	0.0061	15.6	0.0	1.4	1	0	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.9	gi|332795737|ref|YP_004457237.1|	-	0.0042	15.5	0.2	0.13	10.7	0.0	2.8	3	1	0	3	3	3	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|332795737|ref|YP_004457237.1|	-	0.0065	16.4	0.0	0.018	15.0	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
NAD_Gly3P_dh_N	PF01210.18	gi|332795737|ref|YP_004457237.1|	-	0.0069	16.1	0.7	0.049	13.3	0.1	2.1	1	1	1	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.13	gi|332795737|ref|YP_004457237.1|	-	0.0073	16.3	0.1	0.016	15.2	0.1	1.6	1	0	0	1	1	1	1	TrkA-N	domain
Saccharop_dh	PF03435.13	gi|332795737|ref|YP_004457237.1|	-	0.0084	15.1	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
ApbA	PF02558.11	gi|332795737|ref|YP_004457237.1|	-	0.014	14.8	0.2	0.093	12.1	0.0	2.5	2	1	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
GIDA	PF01134.17	gi|332795737|ref|YP_004457237.1|	-	0.015	14.1	0.8	1.1	7.9	0.2	2.9	2	1	1	3	3	3	0	Glucose	inhibited	division	protein	A
GMC_oxred_N	PF00732.14	gi|332795737|ref|YP_004457237.1|	-	0.021	13.9	0.0	0.039	13.1	0.0	1.3	1	0	0	1	1	1	0	GMC	oxidoreductase
DUF4624	PF15417.1	gi|332795737|ref|YP_004457237.1|	-	0.021	14.4	0.2	0.039	13.5	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4624)
FAD_binding_3	PF01494.14	gi|332795737|ref|YP_004457237.1|	-	0.04	12.9	0.0	0.068	12.2	0.0	1.4	1	0	0	1	1	1	0	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|332795737|ref|YP_004457237.1|	-	0.18	10.6	0.0	0.24	10.1	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
DUF572	PF04502.8	gi|332795738|ref|YP_004457238.1|	-	0.0068	15.6	13.2	0.0077	15.4	9.2	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF572)
Spore_coat_CotO	PF14153.1	gi|332795738|ref|YP_004457238.1|	-	0.012	15.1	14.2	0.013	14.9	9.8	1.2	1	0	0	1	1	1	0	Spore	coat	protein	CotO
DUF4041	PF13250.1	gi|332795738|ref|YP_004457238.1|	-	0.063	12.8	0.6	0.17	11.4	0.4	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4041)
Bud13	PF09736.4	gi|332795738|ref|YP_004457238.1|	-	0.19	11.9	15.3	0.28	11.4	10.6	1.2	1	0	0	1	1	1	0	Pre-mRNA-splicing	factor	of	RES	complex
CTP_transf_3	PF02348.14	gi|332795738|ref|YP_004457238.1|	-	0.2	11.2	4.0	0.24	10.9	2.8	1.2	1	0	0	1	1	1	0	Cytidylyltransferase
CDC45	PF02724.9	gi|332795738|ref|YP_004457238.1|	-	0.32	8.9	9.0	0.37	8.7	6.2	1.2	1	0	0	1	1	1	0	CDC45-like	protein
SAPS	PF04499.10	gi|332795738|ref|YP_004457238.1|	-	0.34	9.5	9.7	0.36	9.4	6.8	1.1	1	0	0	1	1	1	0	SIT4	phosphatase-associated	protein
DUF3807	PF12720.2	gi|332795738|ref|YP_004457238.1|	-	0.68	10.0	20.8	0.85	9.7	14.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3807)
Ndc1_Nup	PF09531.5	gi|332795738|ref|YP_004457238.1|	-	1.2	7.4	4.5	1.2	7.4	3.1	1.0	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
Neur_chan_memb	PF02932.11	gi|332795738|ref|YP_004457238.1|	-	1.4	8.7	4.6	1.6	8.5	3.2	1.1	1	0	0	1	1	1	0	Neurotransmitter-gated	ion-channel	transmembrane	region
Ycf1	PF05758.7	gi|332795738|ref|YP_004457238.1|	-	1.6	6.3	17.4	1.8	6.1	12.1	1.0	1	0	0	1	1	1	0	Ycf1
DUF2052	PF09747.4	gi|332795738|ref|YP_004457238.1|	-	2.1	8.2	20.4	3.1	7.7	14.2	1.2	1	0	0	1	1	1	0	Coiled-coil	domain	containing	protein	(DUF2052)
Hid1	PF12722.2	gi|332795738|ref|YP_004457238.1|	-	6.7	4.2	13.8	8.2	3.9	9.6	1.0	1	0	0	1	1	1	0	High-temperature-induced	dauer-formation	protein
V_ATPase_I	PF01496.14	gi|332795738|ref|YP_004457238.1|	-	7.5	4.2	8.9	7.6	4.2	6.2	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Paramyxo_ncap	PF00973.14	gi|332795738|ref|YP_004457238.1|	-	8.7	4.9	10.9	12	4.4	7.6	1.1	1	0	0	1	1	1	0	Paramyxovirus	nucleocapsid	protein
CbiA	PF01656.18	gi|332795739|ref|YP_004457239.1|	-	2.4e-30	105.4	0.3	2.8e-30	105.2	0.2	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|332795739|ref|YP_004457239.1|	-	3.7e-13	49.7	0.0	7.6e-08	32.4	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
MipZ	PF09140.6	gi|332795739|ref|YP_004457239.1|	-	3.4e-12	46.0	0.1	4.1e-12	45.7	0.1	1.2	1	0	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|332795739|ref|YP_004457239.1|	-	1.6e-06	27.3	2.1	0.00017	20.7	0.3	2.2	1	1	1	2	2	2	2	Anion-transporting	ATPase
AAA_24	PF13479.1	gi|332795739|ref|YP_004457239.1|	-	0.001	18.6	0.1	0.0021	17.6	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
Fer4_NifH	PF00142.13	gi|332795739|ref|YP_004457239.1|	-	0.0013	17.9	0.3	0.0026	17.0	0.1	1.5	1	1	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ParA	PF10609.4	gi|332795739|ref|YP_004457239.1|	-	0.004	17.0	0.0	0.0078	16.0	0.0	1.5	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
VirC1	PF07015.6	gi|332795739|ref|YP_004457239.1|	-	0.0062	15.6	0.2	0.013	14.5	0.0	1.5	2	0	0	2	2	2	1	VirC1	protein
RuvB_N	PF05496.7	gi|332795739|ref|YP_004457239.1|	-	0.069	12.1	0.3	0.13	11.2	0.1	1.5	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
SRP54	PF00448.17	gi|332795739|ref|YP_004457239.1|	-	0.11	11.9	0.2	1.2	8.4	0.1	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_25	PF13481.1	gi|332795739|ref|YP_004457239.1|	-	0.14	11.5	0.6	0.74	9.1	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|332795739|ref|YP_004457239.1|	-	0.17	11.4	0.4	0.57	9.6	0.3	1.8	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
VIT1	PF01988.14	gi|332795740|ref|YP_004457240.1|	-	2e-29	102.5	24.3	5.5e-18	65.2	0.9	2.7	2	1	1	3	3	3	2	VIT	family
Rubrerythrin	PF02915.12	gi|332795740|ref|YP_004457240.1|	-	4.6e-07	30.2	4.3	1.1e-06	29.0	3.0	1.6	1	1	0	1	1	1	1	Rubrerythrin
Ferritin_2	PF13668.1	gi|332795740|ref|YP_004457240.1|	-	0.0049	16.8	0.8	0.42	10.5	0.0	2.2	1	1	1	2	2	2	1	Ferritin-like	domain
COQ7	PF03232.8	gi|332795740|ref|YP_004457240.1|	-	0.038	13.4	0.1	2.4	7.5	0.0	2.3	2	0	0	2	2	2	0	Ubiquinone	biosynthesis	protein	COQ7
DUF4349	PF14257.1	gi|332795740|ref|YP_004457240.1|	-	0.09	11.9	0.0	8.6	5.5	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4349)
DUF2754	PF10953.3	gi|332795740|ref|YP_004457240.1|	-	9.2	6.4	8.1	3.9	7.6	0.1	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2754)
DUF4064	PF13273.1	gi|332795740|ref|YP_004457240.1|	-	9.4	6.4	13.0	4.3e+02	1.0	8.5	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
CN_hydrolase	PF00795.17	gi|332795742|ref|YP_004457242.1|	-	8.7e-13	48.0	0.0	3e-12	46.2	0.0	1.8	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
CBS	PF00571.23	gi|332795743|ref|YP_004457243.1|	-	1.2e-47	159.3	2.2	7.5e-13	48.0	0.0	4.2	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.14	gi|332795743|ref|YP_004457243.1|	-	1.8e-08	34.6	4.0	4.7e-08	33.3	2.7	1.7	1	0	0	1	1	1	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
H_kinase_N	PF12282.3	gi|332795743|ref|YP_004457243.1|	-	0.02	14.5	0.1	5	6.7	0.0	2.6	1	1	0	2	2	2	0	Signal	transduction	histidine	kinase
Hist_deacetyl	PF00850.14	gi|332795744|ref|YP_004457244.1|	-	1.6e-80	270.6	0.0	2.8e-80	269.9	0.0	1.3	1	1	1	2	2	2	1	Histone	deacetylase	domain
ATP-grasp	PF02222.17	gi|332795745|ref|YP_004457245.1|	-	2.8e-46	157.0	0.1	4.7e-46	156.2	0.1	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|332795745|ref|YP_004457245.1|	-	2.2e-20	73.1	0.0	3.9e-20	72.3	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|332795745|ref|YP_004457245.1|	-	1.8e-12	46.9	0.0	3.2e-12	46.1	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|332795745|ref|YP_004457245.1|	-	3.3e-09	36.4	0.1	8.4e-09	35.0	0.1	1.6	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.1	gi|332795745|ref|YP_004457245.1|	-	3.7e-09	35.7	0.0	9.6e-06	24.5	0.0	2.1	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
RimK	PF08443.6	gi|332795745|ref|YP_004457245.1|	-	1.4e-08	34.4	0.0	1.9e-07	30.7	0.0	2.4	2	1	0	2	2	2	1	RimK-like	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|332795745|ref|YP_004457245.1|	-	1.1e-07	31.8	0.1	1.8e-07	31.1	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|332795745|ref|YP_004457245.1|	-	2.6e-05	23.8	0.1	0.00016	21.3	0.0	2.2	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATPgrasp_ST	PF14397.1	gi|332795745|ref|YP_004457245.1|	-	0.00019	20.6	0.0	0.0041	16.2	0.0	2.1	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
2-Hacid_dh_C	PF02826.14	gi|332795745|ref|YP_004457245.1|	-	0.0014	17.8	0.0	0.0026	16.9	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
CPSase_L_chain	PF00289.17	gi|332795745|ref|YP_004457245.1|	-	0.0018	18.3	0.1	0.007	16.4	0.0	2.1	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
3HCDH_N	PF02737.13	gi|332795745|ref|YP_004457245.1|	-	0.022	14.4	0.0	0.041	13.5	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
SpoU_sub_bind	PF08032.7	gi|332795745|ref|YP_004457245.1|	-	0.024	14.8	0.0	0.48	10.6	0.0	2.9	1	1	1	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
ATP-grasp_5	PF13549.1	gi|332795745|ref|YP_004457245.1|	-	0.024	13.8	0.0	0.13	11.4	0.0	2.1	2	0	0	2	2	2	0	ATP-grasp	domain
RmlD_sub_bind	PF04321.12	gi|332795745|ref|YP_004457245.1|	-	0.029	13.2	0.0	0.052	12.4	0.0	1.4	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
Oxidored_nitro	PF00148.14	gi|332795745|ref|YP_004457245.1|	-	0.095	11.3	0.2	0.25	9.9	0.1	1.7	2	0	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
NAD_binding_10	PF13460.1	gi|332795745|ref|YP_004457245.1|	-	0.098	12.6	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	NADH(P)-binding
FMO-like	PF00743.14	gi|332795745|ref|YP_004457245.1|	-	0.13	10.4	0.0	0.21	9.7	0.0	1.2	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
DUF4143	PF13635.1	gi|332795746|ref|YP_004457246.1|	-	2.4e-05	24.4	0.2	3.6e-05	23.8	0.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
PDDEXK_3	PF13366.1	gi|332795746|ref|YP_004457246.1|	-	0.00084	19.3	0.5	0.0014	18.7	0.3	1.3	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF1801	PF08818.6	gi|332795746|ref|YP_004457246.1|	-	0.018	15.1	0.1	0.034	14.2	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DU1801)
DUF1129	PF06570.6	gi|332795747|ref|YP_004457247.1|	-	8.9	5.5	7.5	0.97	8.6	0.1	2.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1129)
DAO	PF01266.19	gi|332795750|ref|YP_004457250.1|	-	9.9e-15	54.2	0.0	1.3e-08	34.1	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332795750|ref|YP_004457250.1|	-	0.00015	21.7	0.1	0.00057	19.8	0.1	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|332795750|ref|YP_004457250.1|	-	0.00055	19.9	0.0	0.0011	18.9	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
3HCDH_N	PF02737.13	gi|332795750|ref|YP_004457250.1|	-	0.0069	16.0	0.0	0.011	15.3	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.17	gi|332795750|ref|YP_004457250.1|	-	0.011	14.5	0.0	2.3	6.9	0.0	2.6	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
UDPG_MGDP_dh_N	PF03721.9	gi|332795750|ref|YP_004457250.1|	-	0.013	14.9	0.1	0.051	12.9	0.0	1.9	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|332795750|ref|YP_004457250.1|	-	0.014	14.9	0.0	0.024	14.1	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ApbA	PF02558.11	gi|332795750|ref|YP_004457250.1|	-	0.018	14.4	0.0	0.029	13.8	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.12	gi|332795750|ref|YP_004457250.1|	-	0.045	14.1	0.0	1	9.8	0.0	2.9	4	0	0	4	4	4	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|332795750|ref|YP_004457250.1|	-	0.095	12.4	0.0	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
YrzO	PF14142.1	gi|332795751|ref|YP_004457251.1|	-	0.052	13.1	0.1	0.1	12.2	0.1	1.5	1	0	0	1	1	1	0	YrzO-like	protein
MoCF_biosynth	PF00994.19	gi|332795752|ref|YP_004457252.1|	-	7.1e-30	103.3	0.0	8.3e-30	103.0	0.0	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
B12-binding	PF02310.14	gi|332795752|ref|YP_004457252.1|	-	0.058	13.2	0.0	0.088	12.6	0.0	1.3	1	0	0	1	1	1	0	B12	binding	domain
Fer4_8	PF13183.1	gi|332795753|ref|YP_004457253.1|	-	1.2e-08	34.8	3.1	2.3e-08	33.9	2.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332795753|ref|YP_004457253.1|	-	1.2e-08	35.0	1.8	0.0018	18.5	0.0	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|332795753|ref|YP_004457253.1|	-	4.1e-08	32.4	14.1	0.00042	19.7	2.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|332795753|ref|YP_004457253.1|	-	1.6e-07	31.5	4.4	3.3e-07	30.5	3.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332795753|ref|YP_004457253.1|	-	3.1e-07	30.0	5.3	8.4e-07	28.6	3.7	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332795753|ref|YP_004457253.1|	-	6.9e-07	28.8	13.0	0.004	16.9	2.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332795753|ref|YP_004457253.1|	-	2.4e-06	27.8	4.1	0.025	15.0	0.4	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332795753|ref|YP_004457253.1|	-	2.9e-06	27.5	7.9	0.0001	22.6	6.3	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332795753|ref|YP_004457253.1|	-	1.7e-05	25.0	16.6	0.02	15.4	2.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|332795753|ref|YP_004457253.1|	-	2e-05	24.2	10.8	0.0079	16.0	0.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|332795753|ref|YP_004457253.1|	-	7.6e-05	23.3	5.5	0.16	12.7	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|332795753|ref|YP_004457253.1|	-	9.2e-05	22.4	9.9	0.0033	17.6	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|332795753|ref|YP_004457253.1|	-	0.0065	16.2	10.2	0.021	14.6	7.1	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332795753|ref|YP_004457253.1|	-	0.018	15.4	7.3	0.069	13.5	0.5	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|332795753|ref|YP_004457253.1|	-	0.023	15.2	6.2	0.37	11.4	0.6	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF1160	PF06648.6	gi|332795753|ref|YP_004457253.1|	-	0.34	10.6	3.8	0.48	10.2	0.1	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1160)
RPAP3_C	PF13877.1	gi|332795753|ref|YP_004457253.1|	-	1	9.4	6.3	0.66	9.9	0.4	3.3	3	1	0	4	4	4	0	Potential	Monad-binding	region	of	RPAP3
Glycos_transf_1	PF00534.15	gi|332795754|ref|YP_004457254.1|	-	8e-25	87.2	0.2	1.4e-24	86.4	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|332795754|ref|YP_004457254.1|	-	5e-18	65.5	0.0	1e-17	64.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|332795754|ref|YP_004457254.1|	-	0.00038	20.6	0.0	0.00088	19.5	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DEAD	PF00270.24	gi|332795755|ref|YP_004457255.1|	-	1e-24	86.9	0.0	2.3e-24	85.7	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332795755|ref|YP_004457255.1|	-	1.8e-16	59.7	0.0	1e-14	54.1	0.0	2.6	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.5	gi|332795755|ref|YP_004457255.1|	-	7.7e-14	52.0	0.1	2e-13	50.7	0.1	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.10	gi|332795755|ref|YP_004457255.1|	-	0.00018	21.4	0.1	0.00042	20.2	0.0	1.7	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SecA_DEAD	PF07517.9	gi|332795755|ref|YP_004457255.1|	-	0.00071	18.9	0.0	0.0016	17.7	0.0	1.5	1	0	0	1	1	1	1	SecA	DEAD-like	domain
AAA_19	PF13245.1	gi|332795755|ref|YP_004457255.1|	-	0.0022	17.7	0.0	0.0071	16.0	0.0	1.9	1	0	0	1	1	1	1	Part	of	AAA	domain
RNA_pol_A_CTD	PF03118.10	gi|332795755|ref|YP_004457255.1|	-	0.055	12.8	0.3	0.12	11.7	0.2	1.5	1	0	0	1	1	1	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
UvrD-helicase	PF00580.16	gi|332795755|ref|YP_004457255.1|	-	0.13	11.5	0.0	0.2	10.9	0.0	1.3	1	0	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
T2SE	PF00437.15	gi|332795755|ref|YP_004457255.1|	-	0.14	11.0	0.0	0.26	10.1	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|332795755|ref|YP_004457255.1|	-	0.15	11.5	0.0	0.29	10.6	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|332795755|ref|YP_004457255.1|	-	0.22	10.1	0.0	0.33	9.5	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF3212	PF11486.3	gi|332795756|ref|YP_004457256.1|	-	0.04	13.6	0.0	0.046	13.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3212)
Glycos_transf_2	PF00535.21	gi|332795757|ref|YP_004457257.1|	-	7.9e-16	58.1	6.5	1.4e-15	57.3	4.5	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|332795757|ref|YP_004457257.1|	-	0.00066	19.5	0.0	0.0019	18.0	0.0	1.8	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
DUF4550	PF15084.1	gi|332795757|ref|YP_004457257.1|	-	0.026	14.6	0.8	0.058	13.5	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4550)
Glycos_transf_2	PF00535.21	gi|332795758|ref|YP_004457258.1|	-	1.4e-17	63.8	5.0	2.5e-17	63.0	3.5	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|332795758|ref|YP_004457258.1|	-	5.8e-07	29.5	0.0	8.3e-07	29.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
GNT-I	PF03071.10	gi|332795758|ref|YP_004457258.1|	-	0.0028	16.2	0.1	0.0045	15.5	0.1	1.2	1	0	0	1	1	1	1	GNT-I	family
Glycos_transf_1	PF00534.15	gi|332795759|ref|YP_004457259.1|	-	4.7e-18	65.1	0.3	1.3e-17	63.7	0.2	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|332795759|ref|YP_004457259.1|	-	2.4e-05	24.5	0.0	4.3e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|332795759|ref|YP_004457259.1|	-	2.7e-05	23.9	0.1	5.1e-05	23.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|332795759|ref|YP_004457259.1|	-	0.0075	16.5	0.0	0.019	15.2	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Pyr_redox_2	PF07992.9	gi|332795760|ref|YP_004457260.1|	-	1.1e-26	93.9	0.7	1.5e-26	93.5	0.5	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|332795760|ref|YP_004457260.1|	-	6.4e-11	41.7	0.9	6.1e-06	25.3	0.3	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332795760|ref|YP_004457260.1|	-	9.9e-09	35.5	0.0	9.3e-06	25.8	0.0	2.3	1	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|332795760|ref|YP_004457260.1|	-	1.6e-08	33.8	2.4	4.5e-06	25.7	0.2	3.1	2	1	1	3	3	3	2	FAD	binding	domain
Pyr_redox	PF00070.22	gi|332795760|ref|YP_004457260.1|	-	4.4e-07	30.2	1.1	0.0021	18.4	0.0	3.1	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|332795760|ref|YP_004457260.1|	-	1e-05	24.8	0.2	0.0014	17.7	0.1	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|332795760|ref|YP_004457260.1|	-	1.9e-05	23.9	2.7	0.00053	19.1	0.1	2.8	2	1	1	3	3	3	1	Thi4	family
GIDA	PF01134.17	gi|332795760|ref|YP_004457260.1|	-	6.2e-05	22.0	3.0	0.0011	17.8	0.1	2.7	2	1	1	3	3	3	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332795760|ref|YP_004457260.1|	-	0.00013	21.9	0.1	0.00026	20.9	0.1	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|332795760|ref|YP_004457260.1|	-	0.0014	17.1	0.0	0.055	11.9	0.0	2.4	2	0	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332795760|ref|YP_004457260.1|	-	0.0031	16.6	0.1	0.0069	15.4	0.0	1.6	2	0	0	2	2	2	1	FAD	binding	domain
K_oxygenase	PF13434.1	gi|332795760|ref|YP_004457260.1|	-	0.023	13.6	0.0	4.6	6.0	0.0	2.9	3	0	0	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Lycopene_cycl	PF05834.7	gi|332795760|ref|YP_004457260.1|	-	0.029	13.3	0.2	0.044	12.7	0.1	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
TauE	PF01925.14	gi|332795761|ref|YP_004457261.1|	-	1.1e-40	139.6	22.6	1.3e-40	139.3	15.7	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
AdoMet_Synthase	PF01941.14	gi|332795761|ref|YP_004457261.1|	-	0.051	12.0	0.0	0.072	11.5	0.0	1.1	1	0	0	1	1	1	0	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
OprD	PF03573.8	gi|332795761|ref|YP_004457261.1|	-	0.16	10.7	0.4	0.23	10.2	0.3	1.1	1	0	0	1	1	1	0	outer	membrane	porin,	OprD	family
DUF3487	PF11990.3	gi|332795761|ref|YP_004457261.1|	-	7	6.0	12.1	0.95	8.8	0.8	3.0	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF3487)
DUF1634	PF07843.6	gi|332795762|ref|YP_004457262.1|	-	4.4e-24	84.1	12.8	5.2e-24	83.9	8.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
DUF2417	PF10329.4	gi|332795762|ref|YP_004457262.1|	-	4.2	6.6	11.0	12	5.2	7.5	1.8	1	1	0	1	1	1	0	Region	of	unknown	function	(DUF2417)
Metallophos_3	PF14582.1	gi|332795763|ref|YP_004457263.1|	-	5.7e-08	32.2	0.0	3.1e-07	29.7	0.0	2.0	2	0	0	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Metallophos_2	PF12850.2	gi|332795763|ref|YP_004457263.1|	-	1.9e-07	31.0	0.0	7.1e-07	29.1	0.0	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|332795763|ref|YP_004457263.1|	-	1.1e-06	28.1	1.6	5.7e-06	25.8	1.1	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
MetRS-N	PF09635.5	gi|332795763|ref|YP_004457263.1|	-	0.095	13.0	0.1	0.17	12.3	0.1	1.3	1	0	0	1	1	1	0	MetRS-N	binding	domain
YcgL	PF05166.8	gi|332795763|ref|YP_004457263.1|	-	0.19	11.8	1.8	0.43	10.7	0.4	2.1	2	0	0	2	2	2	0	YcgL	domain
MFS_1	PF07690.11	gi|332795764|ref|YP_004457264.1|	-	1.1e-25	90.1	62.6	3.8e-22	78.4	24.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332795764|ref|YP_004457264.1|	-	0.001	17.2	0.4	0.001	17.2	0.3	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
TM_helix	PF05552.7	gi|332795764|ref|YP_004457264.1|	-	1.1	8.9	9.8	0.79	9.4	0.2	3.6	3	0	0	3	3	3	0	Conserved	TM	helix
Molybdopterin	PF00384.17	gi|332795765|ref|YP_004457265.1|	-	2.2e-09	36.5	0.0	1.9e-06	26.9	0.0	2.1	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
DUF2299	PF10061.4	gi|332795767|ref|YP_004457267.1|	-	1.4e-41	141.1	0.1	1.6e-41	140.9	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
Glyco_hydro_52	PF03512.8	gi|332795767|ref|YP_004457267.1|	-	0.0048	15.5	0.0	0.0062	15.1	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	52
Enkurin	PF13864.1	gi|332795767|ref|YP_004457267.1|	-	0.076	13.2	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	Calmodulin-binding
Methyltransf_11	PF08241.7	gi|332795768|ref|YP_004457268.1|	-	9.8e-19	67.6	0.0	1.4e-18	67.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332795768|ref|YP_004457268.1|	-	7.6e-12	45.0	0.1	1.3e-11	44.3	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332795768|ref|YP_004457268.1|	-	5.7e-09	36.2	0.0	8.7e-09	35.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|332795768|ref|YP_004457268.1|	-	1.8e-08	34.2	0.0	2.5e-08	33.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|332795768|ref|YP_004457268.1|	-	4.7e-06	25.8	0.0	1.3e-05	24.3	0.0	1.7	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.7	gi|332795768|ref|YP_004457268.1|	-	0.00013	21.3	0.0	0.00019	20.8	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_8	PF05148.10	gi|332795768|ref|YP_004457268.1|	-	0.00014	21.6	0.1	0.00019	21.1	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_12	PF08242.7	gi|332795768|ref|YP_004457268.1|	-	0.00059	20.2	0.0	0.001	19.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
ADH_zinc_N	PF00107.21	gi|332795768|ref|YP_004457268.1|	-	0.0041	16.6	0.0	0.0079	15.7	0.0	1.6	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
Methyltransf_18	PF12847.2	gi|332795768|ref|YP_004457268.1|	-	0.089	13.3	0.1	0.3	11.6	0.1	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
Sugar_tr	PF00083.19	gi|332795769|ref|YP_004457269.1|	-	4.8e-39	134.1	26.4	7e-39	133.6	18.3	1.2	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332795769|ref|YP_004457269.1|	-	3.1e-25	88.6	39.4	1.6e-23	83.0	18.8	2.0	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
Sars6	PF12133.3	gi|332795769|ref|YP_004457269.1|	-	0.033	13.8	0.1	0.12	12.0	0.0	1.9	1	0	0	1	1	1	0	Open	reading	frame	6	from	SARS	coronavirus
DUF543	PF04418.7	gi|332795769|ref|YP_004457269.1|	-	0.033	14.1	0.5	0.32	10.9	0.2	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF543)
RNA_pol_Rpb5_C	PF01191.14	gi|332795770|ref|YP_004457270.1|	-	0.016	14.8	0.0	0.052	13.1	0.0	1.8	2	0	0	2	2	2	0	RNA	polymerase	Rpb5,	C-terminal	domain
Radical_SAM	PF04055.16	gi|332795771|ref|YP_004457271.1|	-	1.2e-19	71.1	0.1	3e-19	69.7	0.0	1.7	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|332795771|ref|YP_004457271.1|	-	5.5e-07	29.5	0.2	1.6e-06	28.0	0.1	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|332795771|ref|YP_004457271.1|	-	0.00059	19.9	0.8	0.024	14.7	0.3	2.7	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
ThiI	PF02568.9	gi|332795772|ref|YP_004457272.1|	-	3.4e-56	189.8	0.0	5.1e-56	189.2	0.0	1.3	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|332795772|ref|YP_004457272.1|	-	2.2e-21	76.2	5.1	5.2e-21	75.0	0.7	2.5	2	0	0	2	2	2	1	THUMP	domain
Rhodanese	PF00581.15	gi|332795772|ref|YP_004457272.1|	-	3.7e-12	46.5	0.0	1.1e-11	45.0	0.0	1.8	1	0	0	1	1	1	1	Rhodanese-like	domain
QueC	PF06508.8	gi|332795772|ref|YP_004457272.1|	-	5.9e-05	22.4	0.1	0.046	12.9	0.1	3.2	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
MULE	PF10551.4	gi|332795772|ref|YP_004457272.1|	-	0.035	14.2	0.0	0.095	12.8	0.0	1.7	1	0	0	1	1	1	0	MULE	transposase	domain
COQ7	PF03232.8	gi|332795775|ref|YP_004457275.1|	-	0.0025	17.2	0.1	0.0087	15.5	0.1	1.9	1	1	0	1	1	1	1	Ubiquinone	biosynthesis	protein	COQ7
AAA	PF00004.24	gi|332795777|ref|YP_004457277.1|	-	3.3e-76	253.8	0.1	3.3e-39	134.1	0.0	3.0	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|332795777|ref|YP_004457277.1|	-	1.4e-19	70.0	0.0	6.4e-09	35.1	0.0	2.9	3	1	0	3	3	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|332795777|ref|YP_004457277.1|	-	4.1e-18	66.3	1.1	1.4e-08	35.6	0.1	3.3	2	2	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|332795777|ref|YP_004457277.1|	-	8.9e-17	61.1	0.0	1.6e-07	31.2	0.0	3.4	2	1	1	3	3	3	2	AAA	domain
TIP49	PF06068.8	gi|332795777|ref|YP_004457277.1|	-	5.9e-15	54.8	1.7	3.7e-07	29.2	0.1	3.3	2	2	1	3	3	3	2	TIP49	C-terminus
AAA_22	PF13401.1	gi|332795777|ref|YP_004457277.1|	-	1.7e-14	54.0	10.4	0.0037	17.4	0.0	5.3	3	2	2	5	5	5	3	AAA	domain
AAA_5	PF07728.9	gi|332795777|ref|YP_004457277.1|	-	2.7e-14	53.0	0.1	1.7e-05	24.5	0.0	3.4	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_2	PF07724.9	gi|332795777|ref|YP_004457277.1|	-	1.3e-13	51.2	0.0	7.3e-06	25.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
DUF815	PF05673.8	gi|332795777|ref|YP_004457277.1|	-	8.4e-13	47.8	0.0	1.3e-05	24.2	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
AAA_33	PF13671.1	gi|332795777|ref|YP_004457277.1|	-	1e-12	48.1	0.0	8.4e-07	28.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|332795777|ref|YP_004457277.1|	-	1.4e-11	44.7	2.6	5.4e-05	23.5	0.1	3.3	3	1	0	3	3	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|332795777|ref|YP_004457277.1|	-	1.5e-10	40.5	0.0	0.00045	19.3	0.0	2.9	3	0	0	3	3	3	2	Zeta	toxin
AAA_16	PF13191.1	gi|332795777|ref|YP_004457277.1|	-	2.2e-10	40.8	0.3	0.0026	17.7	0.0	3.9	2	2	0	2	2	2	2	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|332795777|ref|YP_004457277.1|	-	1.5e-09	38.0	0.0	0.0038	17.3	0.0	4.0	4	0	0	4	4	4	2	RNA	helicase
IstB_IS21	PF01695.12	gi|332795777|ref|YP_004457277.1|	-	2.5e-09	36.7	0.6	0.0019	17.6	0.0	3.2	3	1	0	3	3	2	2	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|332795777|ref|YP_004457277.1|	-	5.8e-09	35.5	0.0	0.0054	16.4	0.0	3.0	3	0	0	3	3	3	2	Part	of	AAA	domain
AAA_28	PF13521.1	gi|332795777|ref|YP_004457277.1|	-	2.5e-08	34.0	0.0	0.002	18.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_24	PF13479.1	gi|332795777|ref|YP_004457277.1|	-	3.9e-08	33.1	0.0	0.0036	16.9	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|332795777|ref|YP_004457277.1|	-	9.9e-08	31.9	7.1	0.0014	18.3	0.2	3.8	3	2	0	3	3	3	2	Archaeal	ATPase
Bac_DnaA	PF00308.13	gi|332795777|ref|YP_004457277.1|	-	1.2e-07	31.5	0.0	0.0051	16.4	0.0	2.7	2	1	0	2	2	2	2	Bacterial	dnaA	protein
Sigma54_activ_2	PF14532.1	gi|332795777|ref|YP_004457277.1|	-	4.8e-07	29.9	0.0	0.013	15.5	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|332795777|ref|YP_004457277.1|	-	5.3e-07	29.0	0.1	0.033	13.3	0.0	3.2	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
SKI	PF01202.17	gi|332795777|ref|YP_004457277.1|	-	6.8e-07	29.2	0.0	0.042	13.7	0.0	2.7	2	0	0	2	2	2	2	Shikimate	kinase
Vps4_C	PF09336.5	gi|332795777|ref|YP_004457277.1|	-	8.5e-07	28.7	2.3	0.00019	21.2	0.1	3.7	3	0	0	3	3	3	1	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|332795777|ref|YP_004457277.1|	-	1.8e-06	27.5	0.1	0.081	12.5	0.0	2.7	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
ABC_tran	PF00005.22	gi|332795777|ref|YP_004457277.1|	-	2.6e-06	27.8	0.1	0.083	13.1	0.0	2.8	2	0	0	2	2	2	2	ABC	transporter
NACHT	PF05729.7	gi|332795777|ref|YP_004457277.1|	-	4.5e-06	26.4	2.6	0.42	10.2	0.0	4.1	3	1	1	4	4	4	2	NACHT	domain
NB-ARC	PF00931.17	gi|332795777|ref|YP_004457277.1|	-	6.1e-06	25.3	0.3	0.06	12.2	0.0	3.5	4	0	0	4	4	4	2	NB-ARC	domain
Parvo_NS1	PF01057.12	gi|332795777|ref|YP_004457277.1|	-	1.1e-05	24.4	0.2	0.044	12.6	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
Sigma54_activat	PF00158.21	gi|332795777|ref|YP_004457277.1|	-	1.5e-05	24.5	0.3	0.46	9.9	0.0	3.5	3	1	0	3	3	2	2	Sigma-54	interaction	domain
AAA_23	PF13476.1	gi|332795777|ref|YP_004457277.1|	-	1.7e-05	25.2	10.9	0.0015	18.9	0.1	3.7	2	1	1	3	3	3	2	AAA	domain
AAA_25	PF13481.1	gi|332795777|ref|YP_004457277.1|	-	3e-05	23.5	8.5	0.24	10.8	0.1	4.2	2	2	0	4	4	4	2	AAA	domain
AAA_11	PF13086.1	gi|332795777|ref|YP_004457277.1|	-	3.2e-05	23.6	0.0	0.21	11.1	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
AAA_3	PF07726.6	gi|332795777|ref|YP_004457277.1|	-	3.3e-05	23.5	0.0	0.17	11.5	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SE	PF00437.15	gi|332795777|ref|YP_004457277.1|	-	9e-05	21.4	0.0	0.21	10.4	0.0	2.4	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|332795777|ref|YP_004457277.1|	-	0.00011	21.4	0.1	0.56	9.3	0.0	2.6	2	0	0	2	2	2	2	PhoH-like	protein
ResIII	PF04851.10	gi|332795777|ref|YP_004457277.1|	-	0.00014	21.7	0.3	0.65	9.8	0.0	2.9	3	0	0	3	3	2	2	Type	III	restriction	enzyme,	res	subunit
NTPase_1	PF03266.10	gi|332795777|ref|YP_004457277.1|	-	0.00023	20.9	6.0	0.37	10.4	0.0	4.5	4	1	1	5	5	4	1	NTPase
KTI12	PF08433.5	gi|332795777|ref|YP_004457277.1|	-	0.00024	20.3	0.0	0.29	10.2	0.0	2.5	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
Cytidylate_kin2	PF13189.1	gi|332795777|ref|YP_004457277.1|	-	0.00026	20.9	0.0	0.084	12.7	0.0	2.6	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
CPT	PF07931.7	gi|332795777|ref|YP_004457277.1|	-	0.00032	20.3	0.0	0.41	10.2	0.0	2.7	2	1	0	2	2	2	1	Chloramphenicol	phosphotransferase-like	protein
KAP_NTPase	PF07693.9	gi|332795777|ref|YP_004457277.1|	-	0.00049	19.1	5.3	7	5.5	0.1	4.1	2	2	2	4	4	4	0	KAP	family	P-loop	domain
DAP3	PF10236.4	gi|332795777|ref|YP_004457277.1|	-	0.00052	19.0	0.0	1.2	7.9	0.0	2.7	2	0	0	2	2	2	2	Mitochondrial	ribosomal	death-associated	protein	3
IPT	PF01745.11	gi|332795777|ref|YP_004457277.1|	-	0.00063	18.9	0.1	0.95	8.5	0.0	2.5	2	0	0	2	2	2	2	Isopentenyl	transferase
MobB	PF03205.9	gi|332795777|ref|YP_004457277.1|	-	0.0012	18.5	0.1	2	8.0	0.0	3.0	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP-synt_ab	PF00006.20	gi|332795777|ref|YP_004457277.1|	-	0.0013	18.2	0.0	0.66	9.4	0.0	2.7	2	1	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_30	PF13604.1	gi|332795777|ref|YP_004457277.1|	-	0.0013	18.3	3.0	0.47	9.9	0.1	3.0	3	1	0	3	3	2	1	AAA	domain
PduV-EutP	PF10662.4	gi|332795777|ref|YP_004457277.1|	-	0.0018	17.8	0.0	1.1	8.7	0.0	2.6	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
Guanylate_kin	PF00625.16	gi|332795777|ref|YP_004457277.1|	-	0.0028	17.1	0.0	1.2	8.4	0.0	2.9	2	1	0	2	2	2	1	Guanylate	kinase
DUF258	PF03193.11	gi|332795777|ref|YP_004457277.1|	-	0.0047	16.1	0.0	1.1	8.3	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|332795777|ref|YP_004457277.1|	-	0.0051	16.3	1.2	2	7.9	0.0	2.7	3	0	0	3	3	2	0	P-loop	containing	region	of	AAA	domain
PIF1	PF05970.9	gi|332795777|ref|YP_004457277.1|	-	0.0062	15.5	0.1	2.1	7.1	0.0	2.7	2	1	0	2	2	2	0	PIF1-like	helicase
ADK	PF00406.17	gi|332795777|ref|YP_004457277.1|	-	0.011	15.6	0.0	3.3	7.5	0.0	3.2	3	0	0	3	3	2	0	Adenylate	kinase
Miro	PF08477.8	gi|332795777|ref|YP_004457277.1|	-	0.012	16.0	0.0	4.9	7.6	0.0	3.2	2	1	0	2	2	2	0	Miro-like	protein
Rad17	PF03215.10	gi|332795777|ref|YP_004457277.1|	-	0.013	14.2	0.0	3.2	6.3	0.0	2.4	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
Viral_helicase1	PF01443.13	gi|332795777|ref|YP_004457277.1|	-	0.013	15.0	0.0	1.6	8.1	0.0	2.7	3	0	0	3	3	2	0	Viral	(Superfamily	1)	RNA	helicase
AGT	PF11440.3	gi|332795777|ref|YP_004457277.1|	-	0.018	13.9	3.0	0.83	8.4	0.0	2.4	2	0	0	2	2	2	0	DNA	alpha-glucosyltransferase
MMR_HSR1	PF01926.18	gi|332795777|ref|YP_004457277.1|	-	0.02	14.8	2.8	3.8	7.4	0.1	3.5	3	1	1	4	4	2	0	50S	ribosome-binding	GTPase
PEPCK_ATP	PF01293.15	gi|332795777|ref|YP_004457277.1|	-	0.021	13.3	0.1	0.22	10.0	0.0	2.1	2	0	0	2	2	2	0	Phosphoenolpyruvate	carboxykinase
SRP54	PF00448.17	gi|332795777|ref|YP_004457277.1|	-	0.024	14.0	1.5	7.1	6.0	0.0	3.7	3	1	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
AAA_13	PF13166.1	gi|332795777|ref|YP_004457277.1|	-	0.024	13.1	1.6	2.5	6.4	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
DUF2075	PF09848.4	gi|332795777|ref|YP_004457277.1|	-	0.03	13.2	0.0	1.6	7.6	0.0	2.4	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
PPV_E1_C	PF00519.12	gi|332795777|ref|YP_004457277.1|	-	0.033	12.8	0.0	5.6	5.4	0.0	2.1	2	0	0	2	2	2	0	Papillomavirus	helicase
6PF2K	PF01591.13	gi|332795777|ref|YP_004457277.1|	-	0.036	13.1	0.0	1.3	8.0	0.0	2.7	2	0	0	2	2	2	0	6-phosphofructo-2-kinase
Torsin	PF06309.6	gi|332795777|ref|YP_004457277.1|	-	0.042	13.7	0.0	6.1	6.7	0.0	2.6	2	0	0	2	2	2	0	Torsin
AAA_10	PF12846.2	gi|332795777|ref|YP_004457277.1|	-	0.048	13.0	6.0	2.3	7.5	0.1	3.7	4	0	0	4	4	3	0	AAA-like	domain
SMC_N	PF02463.14	gi|332795777|ref|YP_004457277.1|	-	0.053	12.7	0.4	5.2	6.2	0.0	2.9	2	1	1	3	3	2	0	RecF/RecN/SMC	N	terminal	domain
APS_kinase	PF01583.15	gi|332795777|ref|YP_004457277.1|	-	0.07	12.7	0.1	3.6	7.2	0.0	2.5	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Gtr1_RagA	PF04670.7	gi|332795777|ref|YP_004457277.1|	-	0.11	11.6	1.8	15	4.6	0.0	3.3	3	1	1	4	4	3	0	Gtr1/RagA	G	protein	conserved	region
AAA_21	PF13304.1	gi|332795777|ref|YP_004457277.1|	-	0.15	11.9	22.5	1.2	8.9	0.0	5.3	2	2	0	3	3	2	0	AAA	domain
Phg_2220_C	PF09524.5	gi|332795777|ref|YP_004457277.1|	-	0.29	11.1	5.2	11	6.0	0.2	4.2	3	1	1	4	4	4	0	Conserved	phage	C-terminus	(Phg_2220_C)
KaiC	PF06745.8	gi|332795777|ref|YP_004457277.1|	-	0.41	9.7	14.6	3.4	6.7	0.1	4.8	3	2	2	5	5	5	0	KaiC
SapB_1	PF05184.10	gi|332795777|ref|YP_004457277.1|	-	2.2	8.2	5.6	14	5.6	0.1	3.4	3	0	0	3	3	3	0	Saposin-like	type	B,	region	1
Zot	PF05707.7	gi|332795777|ref|YP_004457277.1|	-	2.4	7.5	4.8	12	5.3	0.1	3.9	4	1	0	4	4	3	0	Zonular	occludens	toxin	(Zot)
Pyr_redox_2	PF07992.9	gi|332795778|ref|YP_004457278.1|	-	5.6e-36	124.3	1.3	1.6e-22	80.3	0.0	3.3	1	1	2	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|332795778|ref|YP_004457278.1|	-	6.1e-20	71.3	0.0	1.4e-19	70.1	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|332795778|ref|YP_004457278.1|	-	2.7e-16	59.7	5.0	7.6e-16	58.2	0.1	3.3	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332795778|ref|YP_004457278.1|	-	9.4e-15	55.2	0.0	4.9e-12	46.3	0.0	2.4	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|332795778|ref|YP_004457278.1|	-	3.8e-08	32.6	0.0	0.0031	16.4	0.0	2.2	1	1	1	2	2	2	2	L-lysine	6-monooxygenase	(NADPH-requiring)
GIDA	PF01134.17	gi|332795778|ref|YP_004457278.1|	-	5.5e-07	28.7	2.9	6.7e-05	21.9	0.9	3.9	1	1	2	4	4	4	1	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|332795778|ref|YP_004457278.1|	-	1.3e-06	27.7	0.0	0.00013	21.1	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|332795778|ref|YP_004457278.1|	-	3.2e-05	22.9	2.4	0.43	9.4	0.1	3.6	2	2	2	4	4	4	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|332795778|ref|YP_004457278.1|	-	5.3e-05	22.2	3.7	7.8e-05	21.6	0.2	2.7	2	1	2	4	4	4	1	FAD	binding	domain
Thi4	PF01946.12	gi|332795778|ref|YP_004457278.1|	-	8.9e-05	21.6	0.4	0.0016	17.5	0.1	2.5	2	0	0	2	2	2	1	Thi4	family
Lycopene_cycl	PF05834.7	gi|332795778|ref|YP_004457278.1|	-	0.00013	20.9	0.0	0.0047	15.9	0.0	2.7	2	1	1	3	3	3	1	Lycopene	cyclase	protein
NAD_binding_7	PF13241.1	gi|332795778|ref|YP_004457278.1|	-	0.00028	21.1	0.7	0.095	12.9	0.0	2.9	3	1	0	3	3	3	1	Putative	NAD(P)-binding
HI0933_like	PF03486.9	gi|332795778|ref|YP_004457278.1|	-	0.00062	18.3	5.1	0.14	10.5	0.3	3.5	3	1	1	4	4	4	2	HI0933-like	protein
2-Hacid_dh_C	PF02826.14	gi|332795778|ref|YP_004457278.1|	-	0.0025	17.0	0.1	0.52	9.4	0.0	2.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|332795778|ref|YP_004457278.1|	-	0.0083	15.7	0.2	0.074	12.6	0.0	2.2	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
XdhC_C	PF13478.1	gi|332795778|ref|YP_004457278.1|	-	0.0098	16.1	0.0	0.88	9.8	0.0	2.8	2	1	0	2	2	2	1	XdhC	Rossmann	domain
FAD_binding_3	PF01494.14	gi|332795778|ref|YP_004457278.1|	-	0.012	14.7	2.9	0.093	11.7	0.1	3.0	3	0	0	3	3	3	0	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|332795778|ref|YP_004457278.1|	-	0.016	15.2	0.6	0.016	15.2	0.4	2.7	3	0	0	3	3	2	0	NAD(P)-binding	Rossmann-like	domain
3HCDH_N	PF02737.13	gi|332795778|ref|YP_004457278.1|	-	0.11	12.1	0.0	13	5.3	0.0	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|332795778|ref|YP_004457278.1|	-	0.15	11.4	2.0	3	7.1	0.0	2.8	3	0	0	3	3	3	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FliG_C	PF01706.11	gi|332795779|ref|YP_004457279.1|	-	0.0038	17.1	2.8	0.038	13.9	0.1	2.2	2	0	0	2	2	2	1	FliG	C-terminal	domain
FANCI_S2	PF14676.1	gi|332795779|ref|YP_004457279.1|	-	0.0098	15.8	3.0	0.014	15.3	2.1	1.1	1	0	0	1	1	1	1	FANCI	solenoid	2
Flu_PB1	PF00602.12	gi|332795779|ref|YP_004457279.1|	-	0.031	12.0	0.3	0.032	11.9	0.2	1.0	1	0	0	1	1	1	0	Influenza	RNA-dependent	RNA	polymerase	subunit	PB1
DUF4411	PF14367.1	gi|332795779|ref|YP_004457279.1|	-	0.053	13.2	0.1	0.059	13.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
TPR_21	PF09976.4	gi|332795779|ref|YP_004457279.1|	-	0.076	12.9	0.8	0.17	11.8	0.3	1.7	1	1	0	1	1	1	0	Tetratricopeptide	repeat
PMI_typeI	PF01238.16	gi|332795779|ref|YP_004457279.1|	-	0.092	11.6	0.8	0.12	11.3	0.6	1.1	1	0	0	1	1	1	0	Phosphomannose	isomerase	type	I
DUF3420	PF11900.3	gi|332795779|ref|YP_004457279.1|	-	0.11	12.6	0.3	0.3	11.2	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3420)
Not1	PF04054.10	gi|332795779|ref|YP_004457279.1|	-	0.23	10.2	2.2	0.27	10.0	1.5	1.0	1	0	0	1	1	1	0	CCR4-Not	complex	component,	Not1
Rabaptin	PF03528.10	gi|332795779|ref|YP_004457279.1|	-	2.6	7.9	8.2	1.1	9.2	2.9	2.0	2	0	0	2	2	2	0	Rabaptin
TPP_enzyme_C	PF02775.16	gi|332795780|ref|YP_004457280.1|	-	2e-29	102.1	0.1	3.1e-29	101.5	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|332795780|ref|YP_004457280.1|	-	1.4e-15	56.9	0.8	2.4e-14	52.9	0.6	2.2	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
Porphobil_deamC	PF03900.10	gi|332795780|ref|YP_004457280.1|	-	0.15	12.2	0.0	0.38	10.8	0.0	1.7	1	0	0	1	1	1	0	Porphobilinogen	deaminase,	C-terminal	domain
POR_N	PF01855.14	gi|332795781|ref|YP_004457281.1|	-	2.7e-59	200.4	0.0	4e-59	199.9	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|332795781|ref|YP_004457281.1|	-	1e-28	100.3	0.2	3.1e-28	98.8	0.1	1.9	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|332795781|ref|YP_004457281.1|	-	0.00028	20.3	0.4	0.00078	18.9	0.2	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Transketolase_C	PF02780.15	gi|332795781|ref|YP_004457281.1|	-	0.00046	20.1	0.0	0.02	14.8	0.0	2.9	2	1	0	2	2	2	1	Transketolase,	C-terminal	domain
Radical_SAM	PF04055.16	gi|332795781|ref|YP_004457281.1|	-	0.066	13.3	0.1	0.47	10.5	0.0	2.3	2	1	0	2	2	2	0	Radical	SAM	superfamily
Cupin_2	PF07883.6	gi|332795782|ref|YP_004457282.1|	-	0.016	14.6	0.0	0.022	14.2	0.0	1.3	1	0	0	1	1	1	0	Cupin	domain
DUF3211	PF11485.3	gi|332795783|ref|YP_004457283.1|	-	1e-39	135.6	0.4	1.1e-39	135.5	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
TFIIB	PF00382.14	gi|332795784|ref|YP_004457284.1|	-	1.5e-38	130.3	7.4	4.2e-19	68.1	0.6	2.5	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|332795784|ref|YP_004457284.1|	-	4.4e-14	51.5	0.2	7.1e-14	50.8	0.2	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_N	PF00134.18	gi|332795784|ref|YP_004457284.1|	-	3.6e-05	23.3	0.1	0.27	10.8	0.1	2.2	1	1	1	2	2	2	2	Cyclin,	N-terminal	domain
Cyclin_C	PF02984.14	gi|332795784|ref|YP_004457284.1|	-	0.00012	22.0	0.1	0.091	12.6	0.0	2.2	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
HARE-HTH	PF05066.8	gi|332795784|ref|YP_004457284.1|	-	0.00034	20.8	0.2	1.4	9.3	0.0	2.5	2	0	0	2	2	2	2	HB1,	ASXL,	restriction	endonuclease	HTH	domain
Sigma70_r4	PF04545.11	gi|332795784|ref|YP_004457284.1|	-	0.017	14.4	1.3	0.11	11.8	0.8	2.6	1	1	0	1	1	1	0	Sigma-70,	region	4
Sigma70_r4_2	PF08281.7	gi|332795784|ref|YP_004457284.1|	-	0.022	14.2	5.4	0.7	9.3	0.1	3.7	3	1	1	4	4	4	0	Sigma-70,	region	4
HTH_24	PF13412.1	gi|332795784|ref|YP_004457284.1|	-	0.092	12.1	1.7	1.7	8.1	0.1	3.1	2	1	1	3	3	3	0	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.1	gi|332795784|ref|YP_004457284.1|	-	0.11	12.4	1.6	32	4.6	0.0	3.6	2	1	1	3	3	3	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|332795784|ref|YP_004457284.1|	-	1.6	8.4	6.4	1.7	8.4	0.6	3.4	3	1	0	3	3	2	0	Homeodomain-like	domain
HTH_AsnC-type	PF13404.1	gi|332795784|ref|YP_004457284.1|	-	2.5	7.7	7.3	0.59	9.7	0.3	3.4	3	1	1	4	4	4	0	AsnC-type	helix-turn-helix	domain
DUF417	PF04224.7	gi|332795786|ref|YP_004457286.1|	-	0.00069	19.0	0.2	0.00075	18.9	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF417
7TM_GPCR_Srh	PF10318.4	gi|332795786|ref|YP_004457286.1|	-	0.0064	15.3	0.4	0.0067	15.2	0.2	1.0	1	0	0	1	1	1	1	Serpentine	type	7TM	GPCR	chemoreceptor	Srh
PRA1	PF03208.14	gi|332795786|ref|YP_004457286.1|	-	0.0065	15.8	0.7	0.43	9.9	0.6	2.1	2	0	0	2	2	2	1	PRA1	family	protein
DUF1360	PF07098.6	gi|332795786|ref|YP_004457286.1|	-	0.019	14.6	0.0	0.024	14.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1360)
YjgP_YjgQ	PF03739.9	gi|332795786|ref|YP_004457286.1|	-	0.025	13.3	0.5	0.026	13.2	0.4	1.0	1	0	0	1	1	1	0	Predicted	permease	YjgP/YjgQ	family
DUF4181	PF13789.1	gi|332795786|ref|YP_004457286.1|	-	0.035	14.0	0.9	0.042	13.7	0.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4181)
E1-E2_ATPase	PF00122.15	gi|332795786|ref|YP_004457286.1|	-	0.035	13.1	0.2	0.039	12.9	0.1	1.0	1	0	0	1	1	1	0	E1-E2	ATPase
DUF2207	PF09972.4	gi|332795786|ref|YP_004457286.1|	-	0.13	10.8	0.8	0.13	10.8	0.6	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Peroxin-13_N	PF04088.8	gi|332795786|ref|YP_004457286.1|	-	0.2	11.5	0.1	0.2	11.5	0.0	1.5	2	0	0	2	2	2	0	Peroxin	13,	N-terminal	region
CbiA	PF01656.18	gi|332795787|ref|YP_004457287.1|	-	7.4e-11	41.8	0.0	1.1e-10	41.2	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArgK	PF03308.11	gi|332795787|ref|YP_004457287.1|	-	0.0039	16.0	0.0	0.0056	15.4	0.0	1.2	1	0	0	1	1	1	1	ArgK	protein
AAA_31	PF13614.1	gi|332795787|ref|YP_004457287.1|	-	0.0074	16.2	0.0	0.087	12.7	0.0	2.3	1	1	1	2	2	2	1	AAA	domain
MipZ	PF09140.6	gi|332795787|ref|YP_004457287.1|	-	0.016	14.3	0.0	0.025	13.6	0.0	1.2	1	0	0	1	1	1	0	ATPase	MipZ
Smg4_UPF3	PF03467.10	gi|332795787|ref|YP_004457287.1|	-	0.021	14.7	0.3	0.036	14.0	0.2	1.4	1	0	0	1	1	1	0	Smg-4/UPF3	family
ArsA_ATPase	PF02374.10	gi|332795787|ref|YP_004457287.1|	-	0.024	13.6	0.1	0.17	10.8	0.0	2.0	1	1	1	2	2	2	0	Anion-transporting	ATPase
Fer4_NifH	PF00142.13	gi|332795787|ref|YP_004457287.1|	-	0.053	12.7	0.0	0.15	11.2	0.0	1.6	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
YhjQ	PF06564.7	gi|332795787|ref|YP_004457287.1|	-	0.11	11.8	0.0	1.8	7.8	0.0	2.1	2	0	0	2	2	2	0	YhjQ	protein
ABC2_membrane	PF01061.19	gi|332795788|ref|YP_004457288.1|	-	1.4e-13	50.5	27.3	1.4e-13	50.5	18.9	1.7	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|332795788|ref|YP_004457288.1|	-	6.5e-07	28.7	31.5	6.5e-07	28.7	21.8	1.6	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
DUF1290	PF06947.7	gi|332795788|ref|YP_004457288.1|	-	2.6	8.0	7.0	0.57	10.1	1.2	2.6	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF1290)
ABC_tran	PF00005.22	gi|332795789|ref|YP_004457289.1|	-	4.3e-28	98.3	0.0	7.5e-28	97.5	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332795789|ref|YP_004457289.1|	-	3.5e-15	56.7	2.3	1.2e-08	35.2	0.0	2.9	1	1	2	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|332795789|ref|YP_004457289.1|	-	3.8e-09	36.1	3.2	1.6e-05	24.1	0.3	2.5	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332795789|ref|YP_004457289.1|	-	7.1e-05	23.2	0.9	0.00017	21.9	0.6	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|332795789|ref|YP_004457289.1|	-	8e-05	22.0	0.4	0.00015	21.2	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|332795789|ref|YP_004457289.1|	-	0.0014	17.8	0.2	0.003	16.7	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|332795789|ref|YP_004457289.1|	-	0.0019	17.4	0.4	0.27	10.4	0.1	2.3	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
Rad17	PF03215.10	gi|332795789|ref|YP_004457289.1|	-	0.0022	16.7	0.0	0.0031	16.2	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
MMR_HSR1	PF01926.18	gi|332795789|ref|YP_004457289.1|	-	0.0096	15.8	0.0	0.043	13.7	0.0	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|332795789|ref|YP_004457289.1|	-	0.01	15.8	0.1	0.024	14.6	0.1	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_19	PF13245.1	gi|332795789|ref|YP_004457289.1|	-	0.017	14.8	0.0	0.041	13.6	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_22	PF13401.1	gi|332795789|ref|YP_004457289.1|	-	0.032	14.3	0.4	0.13	12.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|332795789|ref|YP_004457289.1|	-	0.042	14.6	0.4	0.51	11.1	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
UPF0079	PF02367.12	gi|332795789|ref|YP_004457289.1|	-	0.062	12.9	0.2	0.13	11.9	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
KH_2	PF07650.12	gi|332795789|ref|YP_004457289.1|	-	0.12	11.9	0.3	0.12	11.9	0.2	2.6	2	1	0	2	2	2	0	KH	domain
AAA_30	PF13604.1	gi|332795789|ref|YP_004457289.1|	-	0.14	11.7	0.0	0.29	10.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SBBP	PF06739.6	gi|332795790|ref|YP_004457290.1|	-	0.11	12.2	0.3	0.21	11.4	0.2	1.4	1	0	0	1	1	1	0	Beta-propeller	repeat
AA_permease_2	PF13520.1	gi|332795791|ref|YP_004457291.1|	-	1.9e-37	128.8	68.0	2.4e-37	128.5	47.1	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332795791|ref|YP_004457291.1|	-	3.6e-07	28.9	55.7	4.8e-07	28.4	38.6	1.1	1	0	0	1	1	1	1	Amino	acid	permease
PMT_2	PF13231.1	gi|332795792|ref|YP_004457292.1|	-	1e-09	38.4	15.6	1e-09	38.4	10.8	2.9	3	1	1	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|332795792|ref|YP_004457292.1|	-	4.8e-05	22.8	10.1	4.8e-05	22.8	7.0	3.3	2	2	2	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF2029	PF09594.5	gi|332795792|ref|YP_004457292.1|	-	0.0032	16.9	7.5	0.0032	16.9	5.2	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2029)
CbiA	PF01656.18	gi|332795793|ref|YP_004457293.1|	-	2.3e-13	50.0	0.2	2.5e-10	40.0	0.0	2.1	2	0	0	2	2	2	2	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|332795793|ref|YP_004457293.1|	-	5.7e-08	32.8	0.1	2e-06	27.8	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|332795793|ref|YP_004457293.1|	-	2.4e-05	23.5	0.8	0.00038	19.5	0.0	2.3	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_17	PF13207.1	gi|332795793|ref|YP_004457293.1|	-	0.00014	22.6	1.1	0.00036	21.3	0.8	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_26	PF13500.1	gi|332795793|ref|YP_004457293.1|	-	0.35	10.4	1.7	8.9	5.8	0.3	2.8	3	0	0	3	3	3	0	AAA	domain
MMPL	PF03176.10	gi|332795794|ref|YP_004457294.1|	-	5.3e-61	206.1	34.1	2.5e-31	108.6	10.4	2.5	2	1	0	2	2	2	2	MMPL	family
Sterol-sensing	PF12349.3	gi|332795794|ref|YP_004457294.1|	-	7.9e-05	22.1	4.8	7.9e-05	22.1	3.3	3.2	3	0	0	3	3	3	2	Sterol-sensing	domain	of	SREBP	cleavage-activation
ABC2_membrane_2	PF12679.2	gi|332795795|ref|YP_004457295.1|	-	1.9e-13	49.9	30.3	2.9e-13	49.3	21.0	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|332795795|ref|YP_004457295.1|	-	2.2e-11	43.3	32.9	2.2e-11	43.3	22.8	1.9	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|332795795|ref|YP_004457295.1|	-	2.7e-06	26.6	44.1	2e-05	23.7	30.7	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|332795796|ref|YP_004457296.1|	-	6.5e-30	104.2	0.0	1.3e-29	103.1	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332795796|ref|YP_004457296.1|	-	2.9e-16	60.3	1.5	1.5e-13	51.3	0.0	2.9	1	1	1	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|332795796|ref|YP_004457296.1|	-	2.3e-07	30.2	3.1	0.011	14.7	0.3	2.8	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332795796|ref|YP_004457296.1|	-	1.2e-05	25.7	5.4	3.8e-05	24.0	3.7	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|332795796|ref|YP_004457296.1|	-	0.00013	21.5	0.0	0.023	14.1	0.0	2.3	1	1	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|332795796|ref|YP_004457296.1|	-	0.00017	21.0	0.1	0.00034	20.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|332795796|ref|YP_004457296.1|	-	0.00066	19.5	0.4	0.28	11.1	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
SMC_N	PF02463.14	gi|332795796|ref|YP_004457296.1|	-	0.0012	18.1	1.2	0.042	13.0	0.2	2.5	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|332795796|ref|YP_004457296.1|	-	0.0018	18.0	4.7	0.018	14.7	0.1	2.6	1	1	0	2	2	2	1	Archaeal	ATPase
NTPase_1	PF03266.10	gi|332795796|ref|YP_004457296.1|	-	0.0026	17.4	3.4	1.5	8.5	0.1	3.2	3	0	0	3	3	3	1	NTPase
AAA_19	PF13245.1	gi|332795796|ref|YP_004457296.1|	-	0.0037	16.9	0.0	0.01	15.5	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|332795796|ref|YP_004457296.1|	-	0.0069	16.5	0.9	0.053	13.6	0.2	2.5	1	1	1	2	2	2	1	AAA	domain
AAA_13	PF13166.1	gi|332795796|ref|YP_004457296.1|	-	0.0077	14.7	0.1	0.016	13.7	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|332795796|ref|YP_004457296.1|	-	0.011	14.9	0.0	0.025	13.7	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|332795796|ref|YP_004457296.1|	-	0.013	15.2	0.3	0.064	12.9	0.0	2.3	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_24	PF13479.1	gi|332795796|ref|YP_004457296.1|	-	0.02	14.4	0.8	0.42	10.1	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
MMR_HSR1	PF01926.18	gi|332795796|ref|YP_004457296.1|	-	0.025	14.5	0.0	0.056	13.3	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_11	PF13086.1	gi|332795796|ref|YP_004457296.1|	-	0.027	14.0	0.0	0.22	11.0	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|332795796|ref|YP_004457296.1|	-	0.027	13.5	0.0	0.052	12.6	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
MutS_V	PF00488.16	gi|332795796|ref|YP_004457296.1|	-	0.032	13.6	0.2	0.084	12.2	0.0	1.7	2	0	0	2	2	2	0	MutS	domain	V
AAA_33	PF13671.1	gi|332795796|ref|YP_004457296.1|	-	0.051	13.4	0.0	0.63	9.9	0.0	2.5	1	1	0	2	2	2	0	AAA	domain
GlutR_dimer	PF00745.15	gi|332795796|ref|YP_004457296.1|	-	0.064	13.1	0.1	0.19	11.6	0.1	1.8	1	0	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
AAA_16	PF13191.1	gi|332795796|ref|YP_004457296.1|	-	0.074	13.0	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|332795796|ref|YP_004457296.1|	-	0.095	12.0	0.5	1.3	8.3	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
UPF0079	PF02367.12	gi|332795796|ref|YP_004457296.1|	-	0.1	12.2	0.1	0.21	11.2	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|332795796|ref|YP_004457296.1|	-	0.11	12.7	1.6	0.64	10.2	0.6	2.6	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|332795796|ref|YP_004457296.1|	-	0.17	11.5	0.2	0.79	9.3	0.1	2.0	2	0	0	2	2	2	0	NACHT	domain
AAA_18	PF13238.1	gi|332795796|ref|YP_004457296.1|	-	0.29	11.4	4.0	30	4.9	2.7	3.0	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane	PF01061.19	gi|332795797|ref|YP_004457297.1|	-	0.0013	17.9	23.4	0.0013	17.9	16.2	1.8	1	1	1	2	2	2	1	ABC-2	type	transporter
QueT	PF06177.6	gi|332795797|ref|YP_004457297.1|	-	0.16	11.9	20.2	0.016	15.1	7.1	2.5	1	1	1	2	2	2	0	QueT	transporter
ABC2_membrane_3	PF12698.2	gi|332795797|ref|YP_004457297.1|	-	4.1	6.3	43.2	0.011	14.8	22.4	1.8	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|332795798|ref|YP_004457298.1|	-	5.9e-24	84.9	0.0	1e-23	84.1	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332795798|ref|YP_004457298.1|	-	3.8e-13	50.0	0.0	5e-07	29.9	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|332795798|ref|YP_004457298.1|	-	4.6e-05	22.7	0.1	0.019	14.1	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|332795798|ref|YP_004457298.1|	-	5.9e-05	22.3	0.0	8.3e-05	21.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|332795798|ref|YP_004457298.1|	-	6.2e-05	22.2	0.0	0.012	14.7	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332795798|ref|YP_004457298.1|	-	0.00012	22.5	0.1	0.0002	21.7	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|332795798|ref|YP_004457298.1|	-	0.00062	18.3	0.1	0.003	16.0	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|332795798|ref|YP_004457298.1|	-	0.00078	18.9	0.1	0.0014	18.0	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ATP-synt_ab	PF00006.20	gi|332795798|ref|YP_004457298.1|	-	0.0018	17.7	0.0	0.0026	17.2	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|332795798|ref|YP_004457298.1|	-	0.032	14.3	0.0	0.063	13.4	0.0	1.6	1	1	1	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|332795798|ref|YP_004457298.1|	-	0.052	13.7	0.1	0.53	10.4	0.0	2.4	3	0	0	3	3	3	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SbcCD_C	PF13558.1	gi|332795798|ref|YP_004457298.1|	-	0.069	13.0	0.0	0.87	9.5	0.0	2.4	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
Alba	PF01918.16	gi|332795798|ref|YP_004457298.1|	-	0.07	12.7	0.0	0.19	11.3	0.0	1.7	1	0	0	1	1	1	0	Alba
AAA_18	PF13238.1	gi|332795798|ref|YP_004457298.1|	-	0.078	13.2	0.0	0.17	12.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|332795798|ref|YP_004457298.1|	-	0.08	12.5	0.1	0.19	11.3	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_16	PF13191.1	gi|332795798|ref|YP_004457298.1|	-	0.085	12.8	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_17	PF13207.1	gi|332795798|ref|YP_004457298.1|	-	0.11	13.3	0.1	0.44	11.3	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
DUF3584	PF12128.3	gi|332795798|ref|YP_004457298.1|	-	0.24	8.7	0.4	0.32	8.2	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Oxidored_molyb	PF00174.14	gi|332795799|ref|YP_004457299.1|	-	1.5e-43	148.1	0.0	1.8e-43	147.8	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
PhaC_N	PF07167.8	gi|332795801|ref|YP_004457301.1|	-	0.0093	15.4	0.0	0.017	14.5	0.0	1.4	1	0	0	1	1	1	1	Poly-beta-hydroxybutyrate	polymerase	(PhaC)	N-terminus
Peptidase_M10	PF00413.19	gi|332795801|ref|YP_004457301.1|	-	0.025	14.2	0.0	0.041	13.6	0.0	1.3	1	0	0	1	1	1	0	Matrixin
HNH_3	PF13392.1	gi|332795801|ref|YP_004457301.1|	-	0.071	12.5	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	HNH	endonuclease
DoxA	PF07680.6	gi|332795803|ref|YP_004457303.1|	-	1.1e-51	173.9	0.7	1.4e-51	173.6	0.5	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxA
GBS_Bsp-like	PF08481.5	gi|332795803|ref|YP_004457303.1|	-	0.04	13.7	1.4	0.047	13.5	0.3	1.6	2	0	0	2	2	2	0	GBS	Bsp-like	repeat
DUF4469	PF14734.1	gi|332795803|ref|YP_004457303.1|	-	0.12	12.2	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4469)	with	IG-like	fold
DoxD	PF04173.8	gi|332795804|ref|YP_004457304.1|	-	1e-68	230.2	1.4	1.1e-68	230.1	1.0	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|332795804|ref|YP_004457304.1|	-	7.6e-08	32.6	8.2	7.6e-08	32.6	5.7	1.9	2	1	0	2	2	2	1	DoxX
MFS_1	PF07690.11	gi|332795805|ref|YP_004457305.1|	-	9e-21	73.9	49.1	1e-20	73.7	29.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332795805|ref|YP_004457305.1|	-	5.5e-12	45.0	11.3	5.5e-12	45.0	7.8	2.1	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
Peptidase_M61	PF05299.7	gi|332795807|ref|YP_004457307.1|	-	3.1e-38	130.5	0.1	1.4e-37	128.4	0.2	1.8	2	0	0	2	2	2	1	M61	glycyl	aminopeptidase
Peptidase_MA_2	PF13485.1	gi|332795807|ref|YP_004457307.1|	-	4.5e-11	42.8	0.1	7.4e-11	42.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	MA	superfamily
PDZ_2	PF13180.1	gi|332795807|ref|YP_004457307.1|	-	0.00044	20.0	2.9	0.0033	17.2	0.7	3.0	2	1	0	2	2	2	1	PDZ	domain
PDZ	PF00595.19	gi|332795807|ref|YP_004457307.1|	-	0.0022	18.1	0.4	0.018	15.1	0.0	2.3	2	0	0	2	2	2	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
GRASP55_65	PF04495.9	gi|332795807|ref|YP_004457307.1|	-	0.13	12.2	0.0	0.36	10.8	0.0	1.7	1	0	0	1	1	1	0	GRASP55/65	PDZ-like	domain
DUF95	PF01944.12	gi|332795808|ref|YP_004457308.1|	-	1.4e-13	50.8	8.9	2.6e-13	49.9	6.1	1.4	1	0	0	1	1	1	1	Integral	membrane	protein	DUF95
Epimerase	PF01370.16	gi|332795809|ref|YP_004457309.1|	-	6.5e-10	38.8	0.0	9.8e-10	38.2	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_4	PF07993.7	gi|332795809|ref|YP_004457309.1|	-	7.7e-08	31.5	0.0	1.1e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Male	sterility	protein
Saccharop_dh	PF03435.13	gi|332795809|ref|YP_004457309.1|	-	1.9e-06	27.1	0.0	2.9e-06	26.5	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
3Beta_HSD	PF01073.14	gi|332795809|ref|YP_004457309.1|	-	1.5e-05	23.8	0.2	8.4e-05	21.4	0.1	2.1	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|332795809|ref|YP_004457309.1|	-	0.00066	19.7	0.0	0.00087	19.3	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
TrkA_N	PF02254.13	gi|332795809|ref|YP_004457309.1|	-	0.005	16.8	0.0	0.0074	16.2	0.0	1.2	1	0	0	1	1	1	1	TrkA-N	domain
RmlD_sub_bind	PF04321.12	gi|332795809|ref|YP_004457309.1|	-	0.071	11.9	0.0	0.11	11.3	0.0	1.5	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
TrkA_N	PF02254.13	gi|332795810|ref|YP_004457310.1|	-	1.4e-15	57.2	0.9	2.5e-15	56.5	0.6	1.4	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|332795810|ref|YP_004457310.1|	-	0.0011	18.4	0.0	0.0039	16.7	0.0	1.9	1	0	0	1	1	1	1	TrkA-C	domain
Ion_trans_2	PF07885.11	gi|332795810|ref|YP_004457310.1|	-	0.014	15.1	8.8	0.025	14.2	6.1	1.4	1	0	0	1	1	1	0	Ion	channel
MCR_gamma	PF02240.11	gi|332795810|ref|YP_004457310.1|	-	0.063	12.4	0.1	0.099	11.7	0.0	1.2	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	gamma	subunit
2-Hacid_dh_C	PF02826.14	gi|332795810|ref|YP_004457310.1|	-	0.1	11.7	0.1	0.18	10.9	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Hydantoinase_B	PF02538.9	gi|332795811|ref|YP_004457311.1|	-	2.2e-153	511.2	0.6	2.5e-153	511.1	0.4	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Spuma_A9PTase	PF03539.9	gi|332795811|ref|YP_004457311.1|	-	0.1	12.5	0.1	0.19	11.6	0.0	1.3	1	0	0	1	1	1	0	Spumavirus	aspartic	protease	(A9)
Hydantoinase_A	PF01968.13	gi|332795812|ref|YP_004457312.1|	-	4.7e-88	295.0	4.4	7.2e-87	291.1	0.1	2.2	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|332795812|ref|YP_004457312.1|	-	1.2e-50	171.5	0.5	1.9e-50	170.8	0.1	1.6	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase	N-terminal	region
MutS_IV	PF05190.13	gi|332795812|ref|YP_004457312.1|	-	0.015	15.4	0.5	0.046	13.8	0.3	1.8	1	0	0	1	1	1	0	MutS	family	domain	IV
BcrAD_BadFG	PF01869.15	gi|332795812|ref|YP_004457312.1|	-	0.064	12.5	0.0	2.9	7.0	0.0	2.2	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
FGGY_N	PF00370.16	gi|332795812|ref|YP_004457312.1|	-	0.067	12.5	0.1	0.28	10.4	0.0	2.0	2	0	0	2	2	2	0	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
AlaDh_PNT_N	PF05222.10	gi|332795812|ref|YP_004457312.1|	-	0.077	12.9	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	N-terminal	domain
MutL	PF13941.1	gi|332795812|ref|YP_004457312.1|	-	0.29	9.4	1.3	9.7	4.3	0.1	2.1	2	0	0	2	2	2	0	MutL	protein
5-FTHF_cyc-lig	PF01812.15	gi|332795813|ref|YP_004457313.1|	-	5.3e-30	104.5	0.0	6.4e-30	104.3	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
Glyco_tranf_2_3	PF13641.1	gi|332795814|ref|YP_004457314.1|	-	2.3e-32	112.6	0.0	3.1e-32	112.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|332795814|ref|YP_004457314.1|	-	1.1e-28	100.3	0.0	1.1e-28	100.3	0.0	2.6	3	0	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|332795814|ref|YP_004457314.1|	-	7.9e-18	64.6	0.0	1.2e-17	64.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|332795814|ref|YP_004457314.1|	-	5.8e-15	55.0	0.0	8.4e-15	54.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|332795814|ref|YP_004457314.1|	-	1.8e-05	23.9	0.0	3e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Cellulose_synt	PF03552.9	gi|332795814|ref|YP_004457314.1|	-	0.00014	20.3	8.5	0.0005	18.5	3.6	2.5	1	1	1	2	2	2	2	Cellulose	synthase
CbiA	PF01656.18	gi|332795815|ref|YP_004457315.1|	-	7.1e-14	51.6	0.1	2.3e-13	50.0	0.1	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|332795815|ref|YP_004457315.1|	-	8.7e-08	32.2	0.1	2.8e-06	27.3	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|332795815|ref|YP_004457315.1|	-	6.8e-05	22.0	0.3	6.8e-05	22.0	0.2	2.3	3	0	0	3	3	3	1	Anion-transporting	ATPase
SRP54	PF00448.17	gi|332795815|ref|YP_004457315.1|	-	0.00014	21.3	0.2	0.4	10.1	0.1	3.2	3	1	1	4	4	4	2	SRP54-type	protein,	GTPase	domain
Fer4_NifH	PF00142.13	gi|332795815|ref|YP_004457315.1|	-	0.0024	17.1	0.9	0.0077	15.4	0.1	2.1	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_19	PF13245.1	gi|332795815|ref|YP_004457315.1|	-	0.013	15.2	0.0	0.066	12.9	0.0	2.0	2	0	0	2	2	2	0	Part	of	AAA	domain
cobW	PF02492.14	gi|332795815|ref|YP_004457315.1|	-	0.015	14.7	0.0	0.032	13.6	0.0	1.6	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|332795815|ref|YP_004457315.1|	-	0.015	15.0	2.6	0.79	9.4	0.0	2.8	3	0	0	3	3	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.1	gi|332795815|ref|YP_004457315.1|	-	0.031	13.7	0.2	0.4	10.2	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|332795815|ref|YP_004457315.1|	-	0.035	14.0	0.0	0.89	9.5	0.0	2.6	2	2	0	2	2	2	0	AAA	ATPase	domain
YhjQ	PF06564.7	gi|332795815|ref|YP_004457315.1|	-	0.041	13.2	0.0	0.075	12.3	0.0	1.6	1	1	0	1	1	1	0	YhjQ	protein
AAA_22	PF13401.1	gi|332795815|ref|YP_004457315.1|	-	0.046	13.8	2.1	3.8	7.6	0.2	3.5	2	2	0	2	2	2	0	AAA	domain
MipZ	PF09140.6	gi|332795815|ref|YP_004457315.1|	-	0.051	12.6	0.1	0.13	11.2	0.1	1.6	1	0	0	1	1	1	0	ATPase	MipZ
Arch_ATPase	PF01637.13	gi|332795815|ref|YP_004457315.1|	-	0.11	12.1	8.9	0.032	13.9	3.2	2.2	2	1	0	2	2	2	0	Archaeal	ATPase
ATP-synt_ab	PF00006.20	gi|332795815|ref|YP_004457315.1|	-	0.13	11.7	0.0	0.46	9.9	0.0	2.0	2	1	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
T2SE	PF00437.15	gi|332795815|ref|YP_004457315.1|	-	0.14	11.0	2.9	0.21	10.4	0.0	2.3	2	1	1	3	3	3	0	Type	II/IV	secretion	system	protein
AAA_18	PF13238.1	gi|332795815|ref|YP_004457315.1|	-	0.17	12.1	8.2	0.74	10.1	0.8	3.4	3	1	0	3	3	3	0	AAA	domain
AAA_17	PF13207.1	gi|332795815|ref|YP_004457315.1|	-	0.69	10.7	4.8	30	5.4	0.3	3.5	2	2	0	2	2	2	0	AAA	domain
DEAD	PF00270.24	gi|332795816|ref|YP_004457316.1|	-	3.5e-16	59.1	0.2	1.7e-15	56.9	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332795816|ref|YP_004457316.1|	-	5.4e-09	35.8	0.0	1.3e-08	34.5	0.0	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332795816|ref|YP_004457316.1|	-	7.1e-07	29.2	0.0	2.2e-06	27.6	0.0	1.8	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|332795816|ref|YP_004457316.1|	-	2.5e-06	27.6	0.0	1.3e-05	25.3	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|332795816|ref|YP_004457316.1|	-	0.0001	21.9	0.0	0.049	13.3	0.0	2.6	2	0	0	2	2	2	2	Part	of	AAA	domain
Zot	PF05707.7	gi|332795816|ref|YP_004457316.1|	-	0.0018	17.7	0.0	0.0035	16.8	0.0	1.5	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
DEAD_2	PF06733.10	gi|332795816|ref|YP_004457316.1|	-	0.0023	17.3	0.0	0.0064	15.9	0.0	1.7	2	0	0	2	2	2	1	DEAD_2
SNF2_N	PF00176.18	gi|332795816|ref|YP_004457316.1|	-	0.0058	15.4	0.0	0.012	14.4	0.0	1.6	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
AAA_10	PF12846.2	gi|332795816|ref|YP_004457316.1|	-	0.023	14.1	0.0	3	7.2	0.0	2.4	2	0	0	2	2	2	0	AAA-like	domain
UvrD-helicase	PF00580.16	gi|332795816|ref|YP_004457316.1|	-	0.025	13.8	0.1	0.6	9.3	0.1	2.4	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
PhoH	PF02562.11	gi|332795816|ref|YP_004457316.1|	-	0.044	13.0	0.0	0.11	11.7	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
Peptidase_S9	PF00326.16	gi|332795817|ref|YP_004457317.1|	-	1.6e-49	168.0	0.0	2.3e-49	167.4	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|332795817|ref|YP_004457317.1|	-	1e-10	41.5	0.0	1.7e-10	40.7	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|332795817|ref|YP_004457317.1|	-	1.8e-07	31.2	0.0	2e-06	27.8	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|332795817|ref|YP_004457317.1|	-	2.8e-07	30.2	0.1	0.00023	20.6	0.2	2.3	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.13	gi|332795817|ref|YP_004457317.1|	-	1.3e-05	24.5	0.1	7.1e-05	22.1	0.0	2.0	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_2	PF02230.11	gi|332795817|ref|YP_004457317.1|	-	0.0063	15.9	0.1	0.042	13.2	0.0	2.0	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
FSH1	PF03959.8	gi|332795817|ref|YP_004457317.1|	-	0.026	13.9	0.0	0.052	12.9	0.0	1.4	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
DUF2920	PF11144.3	gi|332795817|ref|YP_004457317.1|	-	0.05	12.6	0.3	0.16	10.9	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2920)
Metallophos	PF00149.23	gi|332795817|ref|YP_004457317.1|	-	0.06	12.7	0.0	0.28	10.5	0.0	2.1	2	0	0	2	2	2	0	Calcineurin-like	phosphoesterase
UPF0227	PF05728.7	gi|332795817|ref|YP_004457317.1|	-	0.075	12.7	0.0	0.17	11.5	0.0	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
PhoPQ_related	PF10142.4	gi|332795817|ref|YP_004457317.1|	-	0.09	11.2	0.0	0.14	10.6	0.0	1.2	1	0	0	1	1	1	0	PhoPQ-activated	pathogenicity-related	protein
Abhydrolase_3	PF07859.8	gi|332795817|ref|YP_004457317.1|	-	0.2	11.1	0.0	1	8.8	0.0	2.2	2	1	0	2	2	2	0	alpha/beta	hydrolase	fold
DUF2371	PF10177.4	gi|332795818|ref|YP_004457318.1|	-	0.014	15.2	0.6	3.1	7.6	0.0	2.1	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
DUF1469	PF07332.6	gi|332795818|ref|YP_004457318.1|	-	0.06	13.0	3.0	0.85	9.3	0.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF4064	PF13273.1	gi|332795818|ref|YP_004457318.1|	-	0.08	13.0	7.8	1	9.4	2.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF202	PF02656.10	gi|332795818|ref|YP_004457318.1|	-	0.082	13.1	1.8	6.4	7.0	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
ASFV_J13L	PF05568.6	gi|332795818|ref|YP_004457318.1|	-	1.8	8.0	6.3	0.27	10.7	0.1	2.1	1	1	0	2	2	2	0	African	swine	fever	virus	J13L	protein
DUF4097	PF13349.1	gi|332795818|ref|YP_004457318.1|	-	5	6.6	16.6	3	7.3	3.7	3.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4097)
UDG	PF03167.14	gi|332795819|ref|YP_004457319.1|	-	1.3e-30	105.8	0.0	1.7e-30	105.4	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
RmlD_sub_bind	PF04321.12	gi|332795820|ref|YP_004457320.1|	-	2e-24	85.9	0.0	2.8e-24	85.4	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|332795820|ref|YP_004457320.1|	-	7.8e-10	38.5	0.2	1.7e-09	37.4	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|332795820|ref|YP_004457320.1|	-	0.028	14.4	0.0	0.037	14.0	0.0	1.1	1	0	0	1	1	1	0	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|332795820|ref|YP_004457320.1|	-	0.042	12.7	0.0	0.058	12.3	0.0	1.2	1	0	0	1	1	1	0	Male	sterility	protein
DUF1128	PF06569.6	gi|332795821|ref|YP_004457321.1|	-	0.031	13.9	3.0	8.5	6.1	0.1	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1128)
Phage_DsbA	PF11126.3	gi|332795821|ref|YP_004457321.1|	-	0.046	13.8	0.1	0.12	12.4	0.1	1.7	1	0	0	1	1	1	0	Transcriptional	regulator	DsbA
Cnd1	PF12717.2	gi|332795821|ref|YP_004457321.1|	-	0.06	13.1	0.6	0.47	10.2	0.1	2.1	2	0	0	2	2	2	0	non-SMC	mitotic	condensation	complex	subunit	1
Parvo_NS1	PF01057.12	gi|332795821|ref|YP_004457321.1|	-	0.12	11.2	0.5	2.8	6.7	0.1	2.5	1	1	1	2	2	2	0	Parvovirus	non-structural	protein	NS1
FF	PF01846.14	gi|332795821|ref|YP_004457321.1|	-	0.32	10.9	3.5	1.4	8.9	0.0	2.9	3	0	0	3	3	3	0	FF	domain
SOR	PF07682.6	gi|332795822|ref|YP_004457322.1|	-	3.1e-167	554.6	1.4	3.4e-167	554.5	1.0	1.0	1	0	0	1	1	1	1	Sulphur	oxygenase	reductase
ABM	PF03992.11	gi|332795822|ref|YP_004457322.1|	-	2.4e-08	33.8	0.0	0.0065	16.4	0.0	3.3	3	0	0	3	3	3	3	Antibiotic	biosynthesis	monooxygenase
EamA	PF00892.15	gi|332795823|ref|YP_004457323.1|	-	1.2e-29	102.8	30.1	4.7e-18	65.4	8.6	2.6	3	0	0	3	3	3	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|332795823|ref|YP_004457323.1|	-	1.5e-05	25.1	5.9	1.5e-05	25.1	4.1	3.2	1	1	0	2	2	2	1	Multidrug	resistance	efflux	transporter
RseC_MucC	PF04246.7	gi|332795823|ref|YP_004457323.1|	-	0.046	13.2	0.9	0.046	13.2	0.6	3.1	2	2	1	3	3	3	0	Positive	regulator	of	sigma(E),	RseC/MucC
TPT	PF03151.11	gi|332795823|ref|YP_004457323.1|	-	3.6	7.2	18.3	0.054	13.1	1.9	3.4	1	1	1	2	2	2	0	Triose-phosphate	Transporter	family
zf-ribbon_3	PF13248.1	gi|332795824|ref|YP_004457324.1|	-	3.3e-18	64.2	17.5	1.5e-09	36.7	4.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332795824|ref|YP_004457324.1|	-	1.7e-16	59.1	22.5	8.7e-09	34.6	4.2	2.9	3	0	0	3	3	3	2	zinc-ribbon	domain
DZR	PF12773.2	gi|332795824|ref|YP_004457324.1|	-	3.4e-12	45.9	11.9	8.4e-12	44.7	8.3	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-NADH-PPase	PF09297.6	gi|332795824|ref|YP_004457324.1|	-	0.00015	21.1	10.8	0.045	13.2	0.1	3.6	2	1	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
UPF0547	PF10571.4	gi|332795824|ref|YP_004457324.1|	-	0.00023	20.7	15.8	0.0041	16.7	2.6	2.6	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
zf-tcix	PF14952.1	gi|332795824|ref|YP_004457324.1|	-	0.00099	18.4	3.1	0.00099	18.4	2.1	3.1	2	1	1	3	3	3	1	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-RanBP	PF00641.13	gi|332795824|ref|YP_004457324.1|	-	0.0012	17.8	2.2	0.0012	17.8	1.5	1.9	2	0	0	2	2	1	1	Zn-finger	in	Ran	binding	protein	and	others
PolC_DP2	PF03833.8	gi|332795824|ref|YP_004457324.1|	-	0.006	14.3	4.7	0.0076	13.9	3.2	1.1	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
Nudix_N_2	PF14803.1	gi|332795824|ref|YP_004457324.1|	-	0.1	12.2	0.2	0.1	12.2	0.2	3.9	3	1	0	3	3	3	0	Nudix	N-terminal
zf-HIT	PF04438.11	gi|332795824|ref|YP_004457324.1|	-	0.26	10.9	13.3	0.19	11.3	5.3	2.9	2	1	1	3	3	3	0	HIT	zinc	finger
Prok-RING_1	PF14446.1	gi|332795824|ref|YP_004457324.1|	-	1.1	9.0	10.0	1.1	8.9	0.5	2.7	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
NOB1_Zn_bind	PF08772.6	gi|332795824|ref|YP_004457324.1|	-	1.3	8.9	13.4	1.5	8.6	2.5	2.6	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Cript	PF10235.4	gi|332795824|ref|YP_004457324.1|	-	1.6	9.1	8.4	5.4	7.4	2.7	2.4	1	1	1	2	2	2	0	Microtubule-associated	protein	CRIPT
OrfB_Zn_ribbon	PF07282.6	gi|332795824|ref|YP_004457324.1|	-	2.5	7.8	10.0	2.9	7.5	1.2	3.6	2	1	2	4	4	4	0	Putative	transposase	DNA-binding	domain
zf-DHHC	PF01529.15	gi|332795824|ref|YP_004457324.1|	-	2.7	7.3	15.5	2	7.7	0.6	2.4	1	1	1	2	2	2	0	DHHC	palmitoyltransferase
zinc_ribbon_5	PF13719.1	gi|332795824|ref|YP_004457324.1|	-	3.9	7.1	12.6	4.6	6.9	0.5	3.4	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-C3HC4_3	PF13920.1	gi|332795824|ref|YP_004457324.1|	-	5.4	6.7	9.7	0.14	11.8	0.3	2.7	1	1	2	3	3	3	0	Zinc	finger,	C3HC4	type	(RING	finger)
Mu-like_Com	PF10122.4	gi|332795824|ref|YP_004457324.1|	-	7.3	5.7	6.9	0.54	9.3	0.6	2.2	3	0	0	3	3	3	0	Mu-like	prophage	protein	Com
GFA	PF04828.9	gi|332795824|ref|YP_004457324.1|	-	8	6.4	9.7	2.9	7.8	0.1	3.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
SNARE_assoc	PF09335.6	gi|332795825|ref|YP_004457325.1|	-	1.1e-19	70.7	5.7	1.1e-19	70.7	3.9	1.9	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
PDGLE	PF13190.1	gi|332795825|ref|YP_004457325.1|	-	2.3	7.9	5.0	1.2	8.8	0.2	2.2	2	0	0	2	2	2	0	PDGLE	domain
MscL	PF01741.13	gi|332795825|ref|YP_004457325.1|	-	3	7.9	10.1	1.9	8.6	2.3	2.4	2	1	1	3	3	3	0	Large-conductance	mechanosensitive	channel,	MscL
MFS_1	PF07690.11	gi|332795826|ref|YP_004457326.1|	-	7.7e-25	87.3	50.1	4.2e-13	48.7	10.9	3.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
UPF0126	PF03458.8	gi|332795826|ref|YP_004457326.1|	-	0.0025	17.3	0.2	0.0025	17.3	0.2	3.5	3	0	0	3	3	3	2	UPF0126	domain
PCP	PF02429.10	gi|332795827|ref|YP_004457327.1|	-	0.0041	17.2	1.7	0.38	10.8	0.1	2.2	1	1	1	2	2	2	2	Peridinin-chlorophyll	A	binding	protein
FliG_C	PF01706.11	gi|332795827|ref|YP_004457327.1|	-	0.045	13.7	2.0	0.65	10.0	0.3	2.3	1	1	0	2	2	2	0	FliG	C-terminal	domain
Xpo1	PF08389.7	gi|332795827|ref|YP_004457327.1|	-	0.046	13.6	0.6	0.16	11.9	0.4	1.8	1	1	0	1	1	1	0	Exportin	1-like	protein
Phage_min_cap2	PF06152.6	gi|332795827|ref|YP_004457327.1|	-	0.052	12.5	0.5	0.058	12.3	0.3	1.2	1	0	0	1	1	1	0	Phage	minor	capsid	protein	2
Alpha-E	PF04168.7	gi|332795827|ref|YP_004457327.1|	-	0.058	12.7	0.0	0.066	12.5	0.0	1.0	1	0	0	1	1	1	0	A	predicted	alpha-helical	domain	with	a	conserved	ER	motif.
MgtE_N	PF03448.12	gi|332795827|ref|YP_004457327.1|	-	0.082	13.2	1.7	1.1	9.6	0.2	3.0	2	2	1	3	3	3	0	MgtE	intracellular	N	domain
FadR_C	PF07840.7	gi|332795827|ref|YP_004457327.1|	-	0.095	12.3	1.3	4.4	6.9	0.1	2.1	1	1	1	2	2	2	0	FadR	C-terminal	domain
CDC37_C	PF08564.5	gi|332795827|ref|YP_004457327.1|	-	0.21	11.4	2.9	4.3	7.2	0.0	2.2	2	0	0	2	2	2	0	Cdc37	C	terminal	domain
adh_short_C2	PF13561.1	gi|332795828|ref|YP_004457328.1|	-	3.2e-35	122.0	0.0	4.1e-35	121.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|332795828|ref|YP_004457328.1|	-	6.7e-30	104.1	0.0	9.2e-30	103.7	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|332795828|ref|YP_004457328.1|	-	6.9e-12	45.3	0.0	9.6e-12	44.9	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|332795828|ref|YP_004457328.1|	-	4.9e-06	26.1	0.0	7.6e-06	25.5	0.0	1.3	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NmrA	PF05368.8	gi|332795828|ref|YP_004457328.1|	-	0.0015	17.8	0.7	0.0022	17.2	0.2	1.7	2	1	0	2	2	2	1	NmrA-like	family
NAD_binding_10	PF13460.1	gi|332795828|ref|YP_004457328.1|	-	0.0022	18.0	0.0	0.0031	17.5	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
3Beta_HSD	PF01073.14	gi|332795828|ref|YP_004457328.1|	-	0.0023	16.6	0.1	0.0065	15.2	0.0	1.7	2	0	0	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|332795828|ref|YP_004457328.1|	-	0.0026	16.6	0.0	0.0034	16.3	0.0	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
TrkA_N	PF02254.13	gi|332795828|ref|YP_004457328.1|	-	0.0052	16.7	0.1	0.012	15.6	0.0	1.6	1	0	0	1	1	1	1	TrkA-N	domain
F420_oxidored	PF03807.12	gi|332795828|ref|YP_004457328.1|	-	0.0073	16.7	0.0	0.067	13.6	0.0	2.2	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|332795828|ref|YP_004457328.1|	-	0.014	14.5	0.8	0.045	12.8	0.2	2.0	2	1	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
THF_DHG_CYH_C	PF02882.14	gi|332795828|ref|YP_004457328.1|	-	0.017	14.1	0.1	1.4	7.9	0.0	2.5	2	1	1	3	3	3	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_4	PF07993.7	gi|332795828|ref|YP_004457328.1|	-	0.038	12.9	0.0	0.34	9.7	0.0	2.1	1	1	0	1	1	1	0	Male	sterility	protein
COX15-CtaA	PF02628.10	gi|332795829|ref|YP_004457329.1|	-	2.2	7.0	10.4	1.1	8.0	4.3	1.9	1	1	1	2	2	2	0	Cytochrome	oxidase	assembly	protein
YceG	PF02618.11	gi|332795830|ref|YP_004457330.1|	-	0.047	12.7	0.0	0.092	11.7	0.0	1.4	1	0	0	1	1	1	0	YceG-like	family
PAPS_reduct	PF01507.14	gi|332795830|ref|YP_004457330.1|	-	0.071	12.9	2.0	0.1	12.4	1.4	1.4	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
AAA_14	PF13173.1	gi|332795831|ref|YP_004457331.1|	-	5.7e-21	74.7	0.1	1.1e-20	73.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|332795831|ref|YP_004457331.1|	-	3.1e-09	36.8	0.0	7.5e-09	35.6	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
FtsK_SpoIIIE	PF01580.13	gi|332795831|ref|YP_004457331.1|	-	1.4e-07	31.2	0.0	2.4e-07	30.4	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
Arch_ATPase	PF01637.13	gi|332795831|ref|YP_004457331.1|	-	0.0017	18.1	0.1	0.099	12.3	0.0	2.5	1	1	1	2	2	2	1	Archaeal	ATPase
Terminase_6	PF03237.10	gi|332795831|ref|YP_004457331.1|	-	0.0099	14.6	0.0	0.018	13.8	0.0	1.4	1	0	0	1	1	1	1	Terminase-like	family
AAA_16	PF13191.1	gi|332795831|ref|YP_004457331.1|	-	0.016	15.1	0.0	0.034	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332795831|ref|YP_004457331.1|	-	0.07	13.2	0.0	0.27	11.4	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
DUF815	PF05673.8	gi|332795831|ref|YP_004457331.1|	-	0.11	11.4	0.0	0.25	10.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
IstB_IS21	PF01695.12	gi|332795831|ref|YP_004457331.1|	-	0.14	11.5	0.0	0.34	10.3	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Pyr_redox_2	PF07992.9	gi|332795832|ref|YP_004457332.1|	-	5.4e-12	46.0	0.0	1.2e-11	44.8	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332795832|ref|YP_004457332.1|	-	3.7e-07	30.4	1.1	0.0072	16.7	0.0	3.3	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|332795832|ref|YP_004457332.1|	-	0.00014	20.8	0.9	0.48	9.2	0.0	2.9	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|332795832|ref|YP_004457332.1|	-	0.028	14.4	0.2	0.076	13.0	0.1	1.7	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|332795832|ref|YP_004457332.1|	-	0.036	12.9	0.7	1.4	7.7	0.0	3.1	2	2	2	4	4	4	0	Lycopene	cyclase	protein
PaREP1	PF05942.6	gi|332795833|ref|YP_004457333.1|	-	2.5e-31	107.9	0.7	3.1e-31	107.6	0.5	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Macro	PF01661.16	gi|332795834|ref|YP_004457334.1|	-	2.5e-40	137.0	0.2	3.2e-40	136.7	0.2	1.1	1	0	0	1	1	1	1	Macro	domain
Macro_2	PF14519.1	gi|332795834|ref|YP_004457334.1|	-	0.0046	16.1	0.0	0.24	10.4	0.0	2.1	2	0	0	2	2	2	2	Macro-like	domain
GRDB	PF07355.7	gi|332795834|ref|YP_004457334.1|	-	0.031	13.2	0.1	0.036	12.9	0.0	1.1	1	0	0	1	1	1	0	Glycine/sarcosine/betaine	reductase	selenoprotein	B	(GRDB)
DUF3197	PF11432.3	gi|332795834|ref|YP_004457334.1|	-	0.055	13.4	0.0	0.087	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3197)
Thermopsin	PF05317.6	gi|332795835|ref|YP_004457335.1|	-	2.5e-61	206.9	17.2	2.5e-61	206.9	11.9	3.4	3	1	1	4	4	4	1	Thermopsin
Sugar_tr	PF00083.19	gi|332795836|ref|YP_004457336.1|	-	4.3e-10	38.7	25.3	1.7e-09	36.7	17.6	1.8	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
DUF599	PF04654.7	gi|332795836|ref|YP_004457336.1|	-	0.0011	18.2	4.5	0.18	10.8	0.2	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF599
DUF4065	PF13274.1	gi|332795837|ref|YP_004457337.1|	-	0.0005	20.7	3.5	0.0012	19.5	2.4	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
Pox_D5	PF03288.11	gi|332795837|ref|YP_004457337.1|	-	0.013	15.7	0.5	0.042	14.1	0.4	1.8	1	0	0	1	1	1	0	Poxvirus	D5	protein-like
DUF1456	PF07308.8	gi|332795837|ref|YP_004457337.1|	-	0.023	14.7	0.7	4	7.5	0.1	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1456)
APC2	PF08672.6	gi|332795837|ref|YP_004457337.1|	-	0.043	14.0	4.6	2.4	8.4	0.1	3.3	2	1	2	4	4	4	0	Anaphase	promoting	complex	(APC)	subunit	2
DUF4019	PF13211.1	gi|332795838|ref|YP_004457338.1|	-	0.014	15.6	0.0	0.026	14.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4019)
NADPH_Ox	PF08414.5	gi|332795838|ref|YP_004457338.1|	-	0.046	13.8	1.0	0.14	12.2	0.3	2.1	2	0	0	2	2	2	0	Respiratory	burst	NADPH	oxidase
DUF445	PF04286.7	gi|332795838|ref|YP_004457338.1|	-	0.12	11.9	5.0	0.37	10.2	3.5	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Sec8_exocyst	PF04048.9	gi|332795838|ref|YP_004457338.1|	-	0.82	9.3	9.9	4	7.0	0.1	3.5	3	1	0	3	3	3	0	Sec8	exocyst	complex	component	specific	domain
DUF1473	PF07341.6	gi|332795838|ref|YP_004457338.1|	-	2.3	7.7	9.4	2.5	7.6	0.2	3.2	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1473)
LON	PF02190.11	gi|332795838|ref|YP_004457338.1|	-	2.8	7.5	5.9	1	8.9	1.7	2.0	1	1	1	2	2	2	0	ATP-dependent	protease	La	(LON)	domain
TetR_C_8	PF14278.1	gi|332795838|ref|YP_004457338.1|	-	9.7	6.6	8.2	2	8.8	0.4	2.8	3	0	0	3	3	3	0	Transcriptional	regulator	C-terminal	region
DUF4307	PF14155.1	gi|332795841|ref|YP_004457341.1|	-	0.023	14.4	6.0	0.049	13.4	1.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
DUF3753	PF12575.3	gi|332795841|ref|YP_004457341.1|	-	0.036	13.8	0.9	0.059	13.1	0.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
Baculo_E56	PF04639.7	gi|332795841|ref|YP_004457341.1|	-	0.11	11.1	1.6	0.15	10.6	1.1	1.2	1	0	0	1	1	1	0	Baculoviral	E56	protein,	specific	to	ODV	envelope
DUF3611	PF12263.3	gi|332795841|ref|YP_004457341.1|	-	0.29	10.4	4.7	0.34	10.2	2.5	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3611)
Neurensin	PF14927.1	gi|332795841|ref|YP_004457341.1|	-	1.1	8.5	3.8	1.8	7.9	2.6	1.3	1	1	0	1	1	1	0	Neurensin
SseC	PF04888.7	gi|332795841|ref|YP_004457341.1|	-	2.4	7.4	10.0	2.9	7.1	6.9	1.2	1	0	0	1	1	1	0	Secretion	system	effector	C	(SseC)	like	family
Big_2	PF02368.13	gi|332795841|ref|YP_004457341.1|	-	4.6	7.2	11.2	0.82	9.5	1.4	2.9	1	1	0	2	2	2	0	Bacterial	Ig-like	domain	(group	2)
DUF973	PF06157.6	gi|332795842|ref|YP_004457342.1|	-	6.8e-05	21.9	4.2	0.0001	21.4	2.2	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF973)
DUF4307	PF14155.1	gi|332795842|ref|YP_004457342.1|	-	0.083	12.6	0.6	0.12	12.1	0.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4307)
FixQ	PF05545.6	gi|332795842|ref|YP_004457342.1|	-	8	6.1	6.1	15	5.2	4.2	1.4	1	0	0	1	1	1	0	Cbb3-type	cytochrome	oxidase	component	FixQ
Sugar_tr	PF00083.19	gi|332795843|ref|YP_004457343.1|	-	1.5e-28	99.6	27.5	1.3e-22	80.0	9.0	3.0	1	1	1	3	3	3	3	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332795843|ref|YP_004457343.1|	-	3.3e-27	95.1	40.9	3.2e-16	58.9	16.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF2198	PF09964.4	gi|332795843|ref|YP_004457343.1|	-	0.43	10.3	8.3	3.8	7.3	0.3	4.2	4	0	0	4	4	4	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2198)
Neurensin	PF14927.1	gi|332795843|ref|YP_004457343.1|	-	0.48	9.8	0.0	0.48	9.8	0.0	3.6	3	1	0	3	3	3	0	Neurensin
MtrG	PF04210.8	gi|332795843|ref|YP_004457343.1|	-	1.3	8.7	4.0	20	4.9	1.3	2.9	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
HEPN	PF05168.9	gi|332795844|ref|YP_004457344.1|	-	4.2e-15	55.6	0.1	4.8e-15	55.4	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
Toxin_32	PF08120.6	gi|332795844|ref|YP_004457344.1|	-	0.018	14.6	1.0	0.032	13.8	0.7	1.4	1	0	0	1	1	1	0	Tamulustoxin	family
Glyco_hydro_39	PF01229.12	gi|332795844|ref|YP_004457344.1|	-	0.044	12.1	0.0	0.055	11.8	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	39
PaREP1	PF05942.6	gi|332795845|ref|YP_004457345.1|	-	4.6e-31	107.0	0.8	5.6e-31	106.7	0.5	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF4495	PF14906.1	gi|332795845|ref|YP_004457345.1|	-	0.01	14.8	0.0	0.012	14.5	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4495)
OrfB_Zn_ribbon	PF07282.6	gi|332795846|ref|YP_004457346.1|	-	7.9e-21	73.5	0.3	7.9e-21	73.5	0.2	1.7	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332795846|ref|YP_004457346.1|	-	2.6e-10	40.1	0.4	4.8e-10	39.2	0.3	1.4	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|332795846|ref|YP_004457346.1|	-	0.27	10.8	2.6	0.33	10.5	0.9	1.7	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
CorA	PF01544.13	gi|332795847|ref|YP_004457347.1|	-	0.01	14.9	2.5	0.012	14.7	0.8	1.6	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
DUF2697	PF10906.3	gi|332795847|ref|YP_004457347.1|	-	0.022	14.7	0.2	0.039	13.9	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2697)
DNA_topoisoIV	PF00521.15	gi|332795847|ref|YP_004457347.1|	-	0.033	13.0	2.2	0.13	11.0	1.2	1.9	2	0	0	2	2	2	0	DNA	gyrase/topoisomerase	IV,	subunit	A
DUF2935	PF11155.3	gi|332795847|ref|YP_004457347.1|	-	0.052	13.6	0.3	0.18	11.8	0.1	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2935)
Abi_C	PF14355.1	gi|332795847|ref|YP_004457347.1|	-	0.083	12.8	0.1	0.24	11.3	0.1	1.8	1	1	0	1	1	1	0	Abortive	infection	C-terminus
PIN	PF01850.16	gi|332795848|ref|YP_004457348.1|	-	0.0037	17.5	1.3	1.4	9.2	0.5	2.8	2	1	0	2	2	2	2	PIN	domain
HTH_Tnp_IS630	PF01710.11	gi|332795848|ref|YP_004457348.1|	-	0.05	13.2	0.1	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	Transposase
YMF19	PF02326.10	gi|332795848|ref|YP_004457348.1|	-	2.2	8.8	9.6	0.21	12.1	1.1	3.0	1	1	2	3	3	3	0	Plant	ATP	synthase	F0
Pantoate_transf	PF02548.10	gi|332795849|ref|YP_004457349.1|	-	5.3e-107	356.7	0.0	6e-107	356.6	0.0	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.1	gi|332795849|ref|YP_004457349.1|	-	1.8e-07	30.6	0.2	0.0016	17.7	0.0	3.0	1	1	2	3	3	3	3	Phosphoenolpyruvate	phosphomutase
BPD_transp_1	PF00528.17	gi|332795851|ref|YP_004457351.1|	-	2.3e-17	63.1	45.3	4.3e-12	45.9	11.9	3.8	1	1	2	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
Chitin_synth_2	PF03142.10	gi|332795851|ref|YP_004457351.1|	-	0.17	10.2	2.0	0.31	9.3	1.4	1.3	1	0	0	1	1	1	0	Chitin	synthase
ABC_tran	PF00005.22	gi|332795852|ref|YP_004457352.1|	-	4.5e-36	124.1	0.0	7.3e-36	123.4	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332795852|ref|YP_004457352.1|	-	4.4e-11	43.2	4.3	8.2e-05	22.6	0.0	2.8	2	1	1	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|332795852|ref|YP_004457352.1|	-	6.8e-07	28.7	0.5	3.9e-06	26.2	0.3	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|332795852|ref|YP_004457352.1|	-	2.7e-06	26.7	4.2	0.0081	15.2	0.1	2.4	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332795852|ref|YP_004457352.1|	-	7.7e-05	23.1	3.1	0.00037	20.8	0.2	2.4	2	0	0	2	2	2	1	AAA	domain
TOBE_2	PF08402.5	gi|332795852|ref|YP_004457352.1|	-	0.0001	22.2	0.0	0.00023	21.0	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
AAA_16	PF13191.1	gi|332795852|ref|YP_004457352.1|	-	0.00013	21.9	0.1	0.00029	20.8	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|332795852|ref|YP_004457352.1|	-	0.00014	21.6	0.1	0.00027	20.7	0.1	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|332795852|ref|YP_004457352.1|	-	0.00077	19.6	0.1	0.0019	18.3	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|332795852|ref|YP_004457352.1|	-	0.0013	18.1	0.1	0.0026	17.2	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|332795852|ref|YP_004457352.1|	-	0.0015	17.7	0.0	0.0025	17.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|332795852|ref|YP_004457352.1|	-	0.002	17.6	0.1	0.004	16.6	0.1	1.5	1	1	0	1	1	1	1	AAA-like	domain
AAA_33	PF13671.1	gi|332795852|ref|YP_004457352.1|	-	0.003	17.4	0.1	0.012	15.4	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|332795852|ref|YP_004457352.1|	-	0.0035	17.0	0.0	0.0069	16.0	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA_17	PF13207.1	gi|332795852|ref|YP_004457352.1|	-	0.0042	17.8	0.9	0.013	16.2	0.6	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|332795852|ref|YP_004457352.1|	-	0.0052	16.5	0.0	0.011	15.4	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|332795852|ref|YP_004457352.1|	-	0.0058	16.9	0.6	0.015	15.6	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|332795852|ref|YP_004457352.1|	-	0.0069	15.8	0.0	0.013	14.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Miro	PF08477.8	gi|332795852|ref|YP_004457352.1|	-	0.0077	16.7	0.0	0.019	15.4	0.0	1.7	1	0	0	1	1	1	1	Miro-like	protein
T2SE	PF00437.15	gi|332795852|ref|YP_004457352.1|	-	0.0097	14.8	0.1	0.021	13.7	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
cobW	PF02492.14	gi|332795852|ref|YP_004457352.1|	-	0.015	14.7	0.1	0.031	13.7	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_28	PF13521.1	gi|332795852|ref|YP_004457352.1|	-	0.018	15.0	0.1	0.036	14.0	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|332795852|ref|YP_004457352.1|	-	0.027	14.1	0.0	0.053	13.2	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|332795852|ref|YP_004457352.1|	-	0.029	13.9	0.0	0.069	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|332795852|ref|YP_004457352.1|	-	0.03	13.9	0.1	0.06	12.9	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_14	PF13173.1	gi|332795852|ref|YP_004457352.1|	-	0.033	14.0	1.4	0.076	12.9	0.1	2.3	3	1	0	3	3	2	0	AAA	domain
AAA_24	PF13479.1	gi|332795852|ref|YP_004457352.1|	-	0.035	13.7	0.1	0.06	12.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|332795852|ref|YP_004457352.1|	-	0.037	13.1	0.1	0.18	10.8	0.0	2.1	1	1	0	1	1	1	0	Zeta	toxin
AAA	PF00004.24	gi|332795852|ref|YP_004457352.1|	-	0.04	14.1	0.0	0.082	13.1	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.4	gi|332795852|ref|YP_004457352.1|	-	0.057	11.9	0.1	0.56	8.7	0.1	2.2	3	0	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
IstB_IS21	PF01695.12	gi|332795852|ref|YP_004457352.1|	-	0.07	12.5	0.0	0.19	11.1	0.0	1.7	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
NB-ARC	PF00931.17	gi|332795852|ref|YP_004457352.1|	-	0.086	11.6	0.5	0.38	9.5	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
AAA_5	PF07728.9	gi|332795852|ref|YP_004457352.1|	-	0.12	12.1	0.2	0.48	10.1	0.1	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
SBP_bac_8	PF13416.1	gi|332795853|ref|YP_004457353.1|	-	1.7e-10	41.0	0.0	3.9e-09	36.6	0.0	2.1	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|332795853|ref|YP_004457353.1|	-	1.2e-07	31.7	0.0	0.0092	15.7	0.0	2.5	2	1	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|332795853|ref|YP_004457353.1|	-	0.00034	20.3	0.1	0.0056	16.3	0.0	2.2	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|332795853|ref|YP_004457353.1|	-	0.0016	17.8	0.0	0.0031	16.8	0.0	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
AA_permease_2	PF13520.1	gi|332795854|ref|YP_004457354.1|	-	1e-28	100.0	65.6	1.3e-28	99.7	45.5	1.0	1	0	0	1	1	1	1	Amino	acid	permease
NHL	PF01436.16	gi|332795855|ref|YP_004457355.1|	-	1.9e-11	43.2	14.7	0.062	13.2	0.0	7.6	7	0	0	7	7	7	4	NHL	repeat
Lactonase	PF10282.4	gi|332795855|ref|YP_004457355.1|	-	1.7e-06	27.3	5.6	0.0015	17.7	3.9	3.5	1	1	0	1	1	1	1	Lactonase,	7-bladed	beta-propeller
PEGA	PF08308.6	gi|332795855|ref|YP_004457355.1|	-	0.00014	21.5	18.9	0.06	13.1	1.2	5.1	5	0	0	5	5	5	3	PEGA	domain
Arylesterase	PF01731.15	gi|332795855|ref|YP_004457355.1|	-	0.00069	19.5	19.8	0.019	14.9	0.5	6.4	1	1	6	7	7	7	3	Arylesterase
Peptidase_M20	PF01546.23	gi|332795857|ref|YP_004457357.1|	-	9.4e-22	77.4	0.0	1.1e-21	77.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.12	gi|332795857|ref|YP_004457357.1|	-	9.1e-06	25.5	0.0	1.2e-05	25.1	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M28
M20_dimer	PF07687.9	gi|332795857|ref|YP_004457357.1|	-	1.3e-05	24.8	0.0	2.4e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M42	PF05343.9	gi|332795857|ref|YP_004457357.1|	-	0.0044	15.8	0.0	0.0074	15.0	0.0	1.6	1	1	0	1	1	1	1	M42	glutamyl	aminopeptidase
BPL_LplA_LipB	PF03099.14	gi|332795858|ref|YP_004457358.1|	-	1.8e-16	60.2	0.2	3.1e-16	59.5	0.1	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|332795859|ref|YP_004457359.1|	-	0.00026	20.6	1.1	0.011	15.3	0.3	2.1	1	1	1	2	2	2	2	Bacterial	lipoate	protein	ligase	C-terminus
MRP-L51	PF10244.4	gi|332795859|ref|YP_004457359.1|	-	0.041	13.9	0.0	0.048	13.6	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	subunit
SBP_bac_5	PF00496.17	gi|332795860|ref|YP_004457360.1|	-	3.8e-11	42.4	0.0	1.4e-05	24.0	0.0	2.4	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
AJAP1_PANP_C	PF15298.1	gi|332795860|ref|YP_004457360.1|	-	9	6.1	9.8	0.49	10.2	2.4	2.1	3	0	0	3	3	3	0	AJAP1/PANP	C-terminus
DUF2622	PF11080.3	gi|332795861|ref|YP_004457361.1|	-	0.023	14.5	0.2	0.42	10.4	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2622)
BPD_transp_1	PF00528.17	gi|332795862|ref|YP_004457362.1|	-	1.3e-31	109.5	14.4	1.3e-31	109.5	10.0	1.6	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF1129	PF06570.6	gi|332795862|ref|YP_004457362.1|	-	0.36	10.1	6.3	0.042	13.1	0.9	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
BPD_transp_1	PF00528.17	gi|332795863|ref|YP_004457363.1|	-	1.7e-20	73.3	15.6	1.7e-20	73.3	10.8	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|332795864|ref|YP_004457364.1|	-	6.6e-28	97.7	0.0	1e-27	97.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|332795864|ref|YP_004457364.1|	-	1.1e-23	83.3	0.6	2.4e-23	82.2	0.1	1.8	2	0	0	2	2	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|332795864|ref|YP_004457364.1|	-	3e-12	47.1	5.8	2.9e-11	43.8	4.0	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|332795864|ref|YP_004457364.1|	-	4.8e-06	25.9	3.3	5.4e-05	22.5	2.3	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
APS_kinase	PF01583.15	gi|332795864|ref|YP_004457364.1|	-	1.6e-05	24.5	0.0	0.0019	17.8	0.0	2.2	2	0	0	2	2	2	1	Adenylylsulphate	kinase
AAA_29	PF13555.1	gi|332795864|ref|YP_004457364.1|	-	7.5e-05	22.1	0.1	0.00015	21.1	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|332795864|ref|YP_004457364.1|	-	0.00012	22.2	1.0	0.0011	19.1	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332795864|ref|YP_004457364.1|	-	0.0005	20.8	0.0	0.00098	19.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332795864|ref|YP_004457364.1|	-	0.0012	19.1	0.2	0.0051	17.1	0.0	2.0	1	1	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|332795864|ref|YP_004457364.1|	-	0.0014	19.0	1.0	0.0022	18.3	0.7	1.5	1	1	0	1	1	1	1	AAA	domain
PRK	PF00485.13	gi|332795864|ref|YP_004457364.1|	-	0.0014	18.2	0.0	0.0023	17.5	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_16	PF13191.1	gi|332795864|ref|YP_004457364.1|	-	0.0035	17.3	0.3	0.0054	16.7	0.2	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|332795864|ref|YP_004457364.1|	-	0.0039	16.1	0.3	0.0075	15.1	0.2	1.6	1	1	0	1	1	1	1	NB-ARC	domain
T2SE	PF00437.15	gi|332795864|ref|YP_004457364.1|	-	0.011	14.6	0.0	0.021	13.7	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_33	PF13671.1	gi|332795864|ref|YP_004457364.1|	-	0.011	15.6	0.0	0.019	14.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|332795864|ref|YP_004457364.1|	-	0.011	14.9	0.1	0.023	13.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF87	PF01935.12	gi|332795864|ref|YP_004457364.1|	-	0.012	15.5	1.4	0.033	14.0	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_25	PF13481.1	gi|332795864|ref|YP_004457364.1|	-	0.014	14.7	0.5	0.043	13.2	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_13	PF13166.1	gi|332795864|ref|YP_004457364.1|	-	0.021	13.3	0.5	0.5	8.7	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|332795864|ref|YP_004457364.1|	-	0.023	13.8	0.0	0.051	12.7	0.0	1.6	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
UPF0079	PF02367.12	gi|332795864|ref|YP_004457364.1|	-	0.025	14.2	0.1	0.097	12.2	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
Sigma54_activat	PF00158.21	gi|332795864|ref|YP_004457364.1|	-	0.028	13.9	0.0	0.052	13.0	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_15	PF13175.1	gi|332795864|ref|YP_004457364.1|	-	0.037	13.0	7.1	0.56	9.2	1.8	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|332795864|ref|YP_004457364.1|	-	0.037	13.4	0.7	0.079	12.3	0.1	1.8	2	0	0	2	2	2	0	AAA-like	domain
NTPase_1	PF03266.10	gi|332795864|ref|YP_004457364.1|	-	0.045	13.4	0.8	0.11	12.1	0.1	1.9	2	0	0	2	2	2	0	NTPase
NACHT	PF05729.7	gi|332795864|ref|YP_004457364.1|	-	0.053	13.1	0.1	0.11	12.2	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
MobB	PF03205.9	gi|332795864|ref|YP_004457364.1|	-	0.067	12.8	0.1	0.13	11.9	0.1	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|332795864|ref|YP_004457364.1|	-	0.086	13.0	0.1	0.28	11.3	0.0	1.8	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
PIF1	PF05970.9	gi|332795864|ref|YP_004457364.1|	-	0.099	11.5	0.4	0.17	10.8	0.0	1.4	2	0	0	2	2	2	0	PIF1-like	helicase
RNA_helicase	PF00910.17	gi|332795864|ref|YP_004457364.1|	-	0.13	12.4	0.0	0.32	11.1	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
ABC_tran	PF00005.22	gi|332795865|ref|YP_004457365.1|	-	5.4e-30	104.4	0.0	7.9e-30	103.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|332795865|ref|YP_004457365.1|	-	1.1e-18	67.3	0.1	1.8e-18	66.6	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|332795865|ref|YP_004457365.1|	-	9.4e-12	45.4	2.4	1.7e-05	24.9	0.6	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|332795865|ref|YP_004457365.1|	-	0.00015	21.0	0.6	0.00043	19.5	0.4	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|332795865|ref|YP_004457365.1|	-	0.00022	22.0	0.0	0.00037	21.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|332795865|ref|YP_004457365.1|	-	0.0003	20.9	0.9	0.0043	17.2	0.6	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|332795865|ref|YP_004457365.1|	-	0.0015	17.6	4.8	0.11	11.5	1.9	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
DUF258	PF03193.11	gi|332795865|ref|YP_004457365.1|	-	0.0043	16.2	0.2	0.0069	15.5	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|332795865|ref|YP_004457365.1|	-	0.0044	16.7	0.0	0.0067	16.0	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
AAA_16	PF13191.1	gi|332795865|ref|YP_004457365.1|	-	0.0054	16.7	0.0	0.012	15.6	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|332795865|ref|YP_004457365.1|	-	0.0056	16.1	0.2	0.01	15.3	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|332795865|ref|YP_004457365.1|	-	0.01	16.3	0.0	0.023	15.2	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
UPF0079	PF02367.12	gi|332795865|ref|YP_004457365.1|	-	0.011	15.3	0.3	0.019	14.5	0.2	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_18	PF13238.1	gi|332795865|ref|YP_004457365.1|	-	0.011	16.0	3.0	0.045	14.0	2.1	2.1	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|332795865|ref|YP_004457365.1|	-	0.015	15.0	2.9	0.095	12.3	2.0	2.1	1	1	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|332795865|ref|YP_004457365.1|	-	0.017	14.8	0.2	0.031	14.0	0.2	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|332795865|ref|YP_004457365.1|	-	0.021	14.3	0.0	0.035	13.5	0.0	1.4	1	1	0	1	1	1	0	AAA-like	domain
cobW	PF02492.14	gi|332795865|ref|YP_004457365.1|	-	0.024	14.0	0.4	0.044	13.2	0.3	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.18	gi|332795865|ref|YP_004457365.1|	-	0.027	14.4	0.0	0.047	13.6	0.0	1.5	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
NB-ARC	PF00931.17	gi|332795865|ref|YP_004457365.1|	-	0.048	12.5	0.0	0.064	12.1	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
Pox_A32	PF04665.7	gi|332795865|ref|YP_004457365.1|	-	0.051	12.8	0.7	0.18	11.0	0.1	1.9	2	0	0	2	2	2	0	Poxvirus	A32	protein
PRK	PF00485.13	gi|332795865|ref|YP_004457365.1|	-	0.086	12.3	0.0	0.15	11.5	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Rad17	PF03215.10	gi|332795865|ref|YP_004457365.1|	-	0.094	11.3	0.0	0.12	11.0	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
PduV-EutP	PF10662.4	gi|332795865|ref|YP_004457365.1|	-	0.098	12.1	0.3	0.21	11.0	0.2	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
T2SE	PF00437.15	gi|332795865|ref|YP_004457365.1|	-	0.12	11.2	0.1	0.25	10.2	0.1	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_33	PF13671.1	gi|332795865|ref|YP_004457365.1|	-	0.15	11.9	0.0	0.24	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|332795865|ref|YP_004457365.1|	-	0.15	11.1	0.0	0.26	10.3	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_23	PF13476.1	gi|332795865|ref|YP_004457365.1|	-	1.2	9.3	6.1	8	6.7	4.4	2.1	1	1	0	1	1	1	0	AAA	domain
TMEM169	PF15052.1	gi|332795866|ref|YP_004457366.1|	-	2.9	7.8	11.2	0.39	10.6	2.8	2.2	2	0	0	2	2	2	0	TMEM169	protein	family
MarR	PF01047.17	gi|332795867|ref|YP_004457367.1|	-	0.031	13.9	0.1	0.031	13.9	0.0	1.1	1	0	0	1	1	1	0	MarR	family
TrmB	PF01978.14	gi|332795867|ref|YP_004457367.1|	-	0.091	12.4	0.0	0.091	12.4	0.0	1.0	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
ATP_synt_I	PF03899.10	gi|332795868|ref|YP_004457368.1|	-	0.13	12.4	0.0	0.17	12.0	0.0	1.1	1	0	0	1	1	1	0	ATP	synthase	I	chain
PRA1	PF03208.14	gi|332795869|ref|YP_004457369.1|	-	6.9	6.0	17.8	0.24	10.7	3.4	2.5	1	1	0	2	2	2	0	PRA1	family	protein
MFS_1	PF07690.11	gi|332795870|ref|YP_004457370.1|	-	5.5e-15	54.9	63.6	4.4e-13	48.6	18.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332795870|ref|YP_004457370.1|	-	1.9e-11	43.2	23.9	6.7e-06	24.9	0.5	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
ERF	PF04404.7	gi|332795871|ref|YP_004457371.1|	-	0.016	14.7	0.1	0.031	13.8	0.0	1.5	1	1	0	1	1	1	0	ERF	superfamily
PIN	PF01850.16	gi|332795873|ref|YP_004457373.1|	-	2.5e-15	56.8	0.1	2.8e-15	56.7	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
Hormone_2	PF00123.15	gi|332795873|ref|YP_004457373.1|	-	0.033	14.0	0.1	0.066	13.0	0.0	1.5	1	0	0	1	1	1	0	Peptide	hormone
OrfB_Zn_ribbon	PF07282.6	gi|332795874|ref|YP_004457374.1|	-	1.6e-21	75.6	0.4	3.8e-21	74.5	0.3	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332795874|ref|YP_004457374.1|	-	8.1e-08	31.9	0.7	1.5e-07	31.0	0.5	1.5	1	0	0	1	1	1	1	Probable	transposase
Integrase_Zn	PF02022.14	gi|332795874|ref|YP_004457374.1|	-	0.32	10.4	1.7	4.5	6.8	0.0	3.0	4	0	0	4	4	4	0	Integrase	Zinc	binding	domain
4HBT	PF03061.17	gi|332795875|ref|YP_004457375.1|	-	2.5e-19	69.1	0.0	3.8e-19	68.5	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|332795875|ref|YP_004457375.1|	-	1.1e-05	25.3	0.0	1.3e-05	25.1	0.0	1.0	1	0	0	1	1	1	1	Thioesterase-like	superfamily
DUF4442	PF14539.1	gi|332795875|ref|YP_004457375.1|	-	0.0052	16.7	0.0	0.0062	16.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
tRNA-synt_1	PF00133.17	gi|332795876|ref|YP_004457376.1|	-	2.4e-60	204.2	0.1	1.2e-50	172.1	0.3	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|332795876|ref|YP_004457376.1|	-	2.1e-28	99.0	1.5	5.5e-14	51.6	0.0	4.0	3	1	1	4	4	4	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|332795876|ref|YP_004457376.1|	-	2.4e-17	63.1	0.5	6.6e-17	61.6	0.4	1.8	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|332795876|ref|YP_004457376.1|	-	3.8e-13	49.2	0.5	1.9e-05	23.9	0.0	2.9	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.1	gi|332795876|ref|YP_004457376.1|	-	4.2e-05	22.9	0.0	0.00022	20.5	0.0	2.2	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
PaREP1	PF05942.6	gi|332795877|ref|YP_004457377.1|	-	9.1e-27	93.2	2.4	1.1e-26	92.9	1.7	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332795877|ref|YP_004457377.1|	-	0.017	15.0	0.9	0.037	13.9	0.5	1.7	1	1	0	1	1	1	0	HEPN	domain
TPR_11	PF13414.1	gi|332795877|ref|YP_004457377.1|	-	0.022	14.4	0.8	0.11	12.1	0.6	2.3	1	1	0	1	1	1	0	TPR	repeat
DUF440	PF04269.7	gi|332795877|ref|YP_004457377.1|	-	0.034	14.1	0.1	1.5	8.8	0.1	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF440
PRD	PF00874.15	gi|332795877|ref|YP_004457377.1|	-	0.16	12.0	0.7	17	5.6	0.1	2.3	1	1	1	2	2	2	0	PRD	domain
Pyr_redox_2	PF07992.9	gi|332795878|ref|YP_004457378.1|	-	1.9e-09	37.7	1.0	1.6e-08	34.7	0.7	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|332795878|ref|YP_004457378.1|	-	1.2e-05	24.1	0.1	1.9e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Tryptophan	halogenase
Pyr_redox	PF00070.22	gi|332795878|ref|YP_004457378.1|	-	0.00018	21.8	1.5	0.12	12.8	0.3	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|332795878|ref|YP_004457378.1|	-	0.00056	19.7	0.1	0.021	14.6	0.1	2.5	2	0	0	2	2	2	1	FAD-NAD(P)-binding
DAO	PF01266.19	gi|332795878|ref|YP_004457378.1|	-	0.00088	18.2	0.1	0.0018	17.2	0.1	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|332795878|ref|YP_004457378.1|	-	0.0027	17.6	0.1	0.0055	16.6	0.1	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|332795878|ref|YP_004457378.1|	-	0.047	12.5	0.5	0.076	11.8	0.3	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|332795878|ref|YP_004457378.1|	-	0.085	11.7	0.0	0.37	9.6	0.0	1.9	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Pyr_redox_3	PF13738.1	gi|332795878|ref|YP_004457378.1|	-	0.12	12.4	1.7	0.75	9.8	0.2	2.5	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|332795878|ref|YP_004457378.1|	-	0.14	12.4	0.1	0.38	11.0	0.1	1.7	2	0	0	2	2	2	0	Putative	NAD(P)-binding
Shikimate_DH	PF01488.15	gi|332795878|ref|YP_004457378.1|	-	0.28	11.3	1.0	0.67	10.0	0.7	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Aminotran_3	PF00202.16	gi|332795879|ref|YP_004457379.1|	-	4.6e-26	91.4	0.1	3.9e-17	62.1	0.0	2.6	1	1	0	2	2	2	2	Aminotransferase	class-III
ResIII	PF04851.10	gi|332795880|ref|YP_004457380.1|	-	1.4e-19	70.6	0.1	4e-18	65.9	0.0	2.7	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|332795880|ref|YP_004457380.1|	-	7.7e-16	57.7	0.1	8.8e-15	54.3	0.0	2.5	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|332795880|ref|YP_004457380.1|	-	1.5e-11	44.0	0.0	2.5e-10	40.1	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C_2	PF13307.1	gi|332795880|ref|YP_004457380.1|	-	0.013	15.4	0.0	0.65	9.9	0.0	2.5	1	1	1	2	2	2	0	Helicase	C-terminal	domain
MerR	PF00376.18	gi|332795880|ref|YP_004457380.1|	-	0.014	14.9	0.8	0.028	13.9	0.0	1.9	2	0	0	2	2	2	0	MerR	family	regulatory	protein
HBS1_N	PF08938.5	gi|332795880|ref|YP_004457380.1|	-	0.021	14.9	0.2	0.096	12.8	0.1	2.1	1	0	0	1	1	1	0	HBS1	N-terminus
PhoH	PF02562.11	gi|332795880|ref|YP_004457380.1|	-	0.023	13.9	0.0	0.062	12.5	0.0	1.7	1	0	0	1	1	1	0	PhoH-like	protein
MerR_1	PF13411.1	gi|332795880|ref|YP_004457380.1|	-	0.024	14.4	0.0	0.069	12.9	0.0	1.8	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
DUF1241	PF06840.6	gi|332795880|ref|YP_004457380.1|	-	0.04	13.1	1.5	5	6.3	0.0	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1241)
AAA_10	PF12846.2	gi|332795880|ref|YP_004457380.1|	-	0.056	12.8	0.0	0.53	9.6	0.0	2.5	2	1	1	3	3	3	0	AAA-like	domain
T2SE	PF00437.15	gi|332795880|ref|YP_004457380.1|	-	0.08	11.8	0.0	0.17	10.7	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Orthopox_B11R	PF07033.6	gi|332795880|ref|YP_004457380.1|	-	0.11	11.9	1.8	0.3	10.5	1.2	1.6	1	0	0	1	1	1	0	Orthopoxvirus	B11R	protein
PEGA	PF08308.6	gi|332795881|ref|YP_004457381.1|	-	0.083	12.6	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	PEGA	domain
Sugar_tr	PF00083.19	gi|332795882|ref|YP_004457382.1|	-	9.9e-53	179.3	23.7	5.4e-52	176.8	16.4	1.8	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332795882|ref|YP_004457382.1|	-	4.4e-27	94.7	40.2	9.8e-21	73.8	23.4	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|332795882|ref|YP_004457382.1|	-	0.00014	20.3	7.1	0.00014	20.3	4.9	3.3	2	1	0	3	3	3	2	MFS/sugar	transport	protein
DUF3211	PF11485.3	gi|332795883|ref|YP_004457383.1|	-	9.8e-28	96.8	3.3	1.1e-27	96.7	2.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
NTP_transf_2	PF01909.18	gi|332795884|ref|YP_004457384.1|	-	1.8e-09	37.8	0.0	2.8e-09	37.1	0.0	1.4	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|332795885|ref|YP_004457385.1|	-	3.7e-27	94.5	0.2	4.1e-27	94.4	0.2	1.0	1	0	0	1	1	1	1	HEPN	domain
Peptidase_M20	PF01546.23	gi|332795886|ref|YP_004457386.1|	-	5.2e-27	94.5	0.0	6.2e-27	94.3	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|332795886|ref|YP_004457386.1|	-	1e-19	70.3	0.0	1.8e-19	69.5	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M42	PF05343.9	gi|332795886|ref|YP_004457386.1|	-	0.0049	15.6	0.0	0.19	10.4	0.0	2.3	2	0	0	2	2	2	1	M42	glutamyl	aminopeptidase
Peptidase_M28	PF04389.12	gi|332795886|ref|YP_004457386.1|	-	0.0053	16.5	0.0	0.0094	15.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M28
RGS	PF00615.14	gi|332795886|ref|YP_004457386.1|	-	0.1	12.7	0.1	0.78	9.8	0.0	2.1	2	0	0	2	2	2	0	Regulator	of	G	protein	signaling	domain
AA_permease_2	PF13520.1	gi|332795887|ref|YP_004457387.1|	-	2.3e-37	128.5	63.8	3.7e-37	127.8	44.2	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332795887|ref|YP_004457387.1|	-	8.9e-10	37.4	54.8	1.3e-09	36.9	38.0	1.2	1	0	0	1	1	1	1	Amino	acid	permease
Ribosomal_L13e	PF01294.13	gi|332795888|ref|YP_004457388.1|	-	7e-11	41.9	0.0	7.5e-11	41.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13e
DUF603	PF04645.7	gi|332795888|ref|YP_004457388.1|	-	0.089	12.7	0.6	0.11	12.4	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF603
PaREP1	PF05942.6	gi|332795889|ref|YP_004457389.1|	-	4.6e-26	90.9	0.0	5.6e-26	90.6	0.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332795889|ref|YP_004457389.1|	-	0.016	15.1	0.8	0.27	11.1	0.2	2.1	2	0	0	2	2	2	0	HEPN	domain
AhpC-TSA	PF00578.16	gi|332795890|ref|YP_004457390.1|	-	1.6e-37	127.9	0.0	1.9e-37	127.6	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|332795890|ref|YP_004457390.1|	-	9.3e-27	93.3	0.0	1e-26	93.2	0.0	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.9	gi|332795890|ref|YP_004457390.1|	-	7.3e-05	22.4	0.4	0.00066	19.3	0.3	2.0	1	1	0	1	1	1	1	SCO1/SenC
AhpC-TSA_2	PF13911.1	gi|332795890|ref|YP_004457390.1|	-	0.0065	16.3	0.0	0.41	10.5	0.0	2.1	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
Thioredoxin_8	PF13905.1	gi|332795890|ref|YP_004457390.1|	-	0.021	14.9	0.1	0.043	13.9	0.1	1.5	1	1	0	1	1	1	0	Thioredoxin-like
HEPN	PF05168.9	gi|332795891|ref|YP_004457391.1|	-	1e-30	106.0	3.1	1.5e-30	105.5	2.1	1.2	1	0	0	1	1	1	1	HEPN	domain
FlaF	PF07309.6	gi|332795891|ref|YP_004457391.1|	-	0.046	13.5	0.0	0.085	12.7	0.0	1.4	1	0	0	1	1	1	0	Flagellar	protein	FlaF
PaREP1	PF05942.6	gi|332795891|ref|YP_004457391.1|	-	0.063	13.1	0.4	0.086	12.7	0.3	1.3	1	0	0	1	1	1	0	Archaeal	PaREP1/PaREP8	family
Thermopsin	PF05317.6	gi|332795892|ref|YP_004457392.1|	-	1.8e-68	230.3	17.1	1.8e-68	230.3	11.8	2.7	2	2	1	3	3	3	1	Thermopsin
PaREP1	PF05942.6	gi|332795893|ref|YP_004457393.1|	-	8.2e-05	22.4	1.2	0.0001	22.1	0.5	1.5	1	1	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF1780	PF08682.5	gi|332795893|ref|YP_004457393.1|	-	0.027	13.9	0.4	0.05	13.0	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1780)
Imm3	PF14425.1	gi|332795893|ref|YP_004457393.1|	-	0.054	13.4	1.4	0.1	12.5	0.9	1.8	1	1	0	1	1	1	0	Immunity	protein	Imm3
Rop-like	PF05082.8	gi|332795893|ref|YP_004457393.1|	-	0.24	10.8	0.1	0.24	10.8	0.1	3.0	3	1	0	3	3	3	0	Rop-like
Vhr1	PF04001.8	gi|332795893|ref|YP_004457393.1|	-	0.38	10.7	2.5	0.23	11.4	0.2	1.7	2	1	0	2	2	2	0	Transcription	factor	Vhr1
Choline_kin_N	PF04428.9	gi|332795893|ref|YP_004457393.1|	-	0.71	9.3	2.6	3	7.4	0.0	2.8	2	1	1	3	3	3	0	Choline	kinase	N	terminus
PIN	PF01850.16	gi|332795895|ref|YP_004457395.1|	-	1.3e-13	51.2	0.6	1.6e-13	51.0	0.4	1.1	1	0	0	1	1	1	1	PIN	domain
DUF2704	PF10866.3	gi|332795895|ref|YP_004457395.1|	-	0.0018	17.6	0.0	0.002	17.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2704)
DUF4546	PF15079.1	gi|332795895|ref|YP_004457395.1|	-	0.027	13.6	0.0	0.034	13.2	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4546)
GTP_cyclohydro2	PF00925.15	gi|332795895|ref|YP_004457395.1|	-	0.049	12.8	0.0	0.067	12.4	0.0	1.2	1	0	0	1	1	1	0	GTP	cyclohydrolase	II
F-112	PF09645.5	gi|332795895|ref|YP_004457395.1|	-	0.093	12.6	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	F-112	protein
FliT	PF05400.8	gi|332795896|ref|YP_004457396.1|	-	0.0097	16.2	0.3	2.5	8.5	0.0	2.1	2	0	0	2	2	2	2	Flagellar	protein	FliT
MCM	PF00493.18	gi|332795896|ref|YP_004457396.1|	-	0.011	14.5	0.3	0.012	14.4	0.2	1.0	1	0	0	1	1	1	0	MCM2/3/5	family
DUF1694	PF07997.6	gi|332795896|ref|YP_004457396.1|	-	0.044	13.7	0.1	0.049	13.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1694)
EF-hand_like	PF09279.6	gi|332795896|ref|YP_004457396.1|	-	0.047	13.6	0.1	0.082	12.9	0.1	1.5	1	1	0	1	1	1	0	Phosphoinositide-specific	phospholipase	C,	efhand-like
WHEP-TRS	PF00458.15	gi|332795896|ref|YP_004457396.1|	-	0.049	13.3	1.1	0.086	12.5	0.8	1.4	1	0	0	1	1	1	0	WHEP-TRS	domain
Nuc-transf	PF10127.4	gi|332795896|ref|YP_004457396.1|	-	0.052	12.8	0.5	0.057	12.7	0.3	1.1	1	0	0	1	1	1	0	Predicted	nucleotidyltransferase
DapH_N	PF08503.5	gi|332795896|ref|YP_004457396.1|	-	0.5	10.5	2.4	1.6	8.8	1.3	1.8	1	1	1	2	2	2	0	Tetrahydrodipicolinate	succinyltransferase	N-terminal
RHH_1	PF01402.16	gi|332795896|ref|YP_004457396.1|	-	0.94	9.4	4.6	1.1	9.3	0.3	2.2	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
ATP-cone	PF03477.11	gi|332795897|ref|YP_004457397.1|	-	2e-08	34.5	2.8	2.6e-08	34.1	1.2	1.7	2	0	0	2	2	2	1	ATP	cone	domain
SRP54_N	PF02881.14	gi|332795897|ref|YP_004457397.1|	-	0.00062	19.8	5.7	0.0048	16.9	1.3	2.4	2	0	0	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
Pox_A6	PF04924.7	gi|332795897|ref|YP_004457397.1|	-	0.07	11.9	0.2	0.088	11.5	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	A6	protein
DUF1002	PF06207.6	gi|332795897|ref|YP_004457397.1|	-	0.11	11.7	1.0	1.3	8.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1002)
Spore_III_AF	PF09581.5	gi|332795897|ref|YP_004457397.1|	-	0.41	10.4	3.4	2.1	8.1	2.3	2.0	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AF	(Spore_III_AF)
Y_Y_Y	PF07495.8	gi|332795898|ref|YP_004457398.1|	-	0.072	12.8	5.4	1.1	9.0	3.7	2.5	1	1	0	1	1	1	0	Y_Y_Y	domain
DoxA	PF07680.6	gi|332795898|ref|YP_004457398.1|	-	0.12	12.0	0.4	4.8	6.8	0.0	2.5	1	1	1	2	2	2	0	TQO	small	subunit	DoxA
Antitoxin-MazE	PF04014.13	gi|332795899|ref|YP_004457399.1|	-	6.1e-11	41.7	0.4	1.1e-10	41.0	0.2	1.5	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
PduL	PF06130.7	gi|332795899|ref|YP_004457399.1|	-	0.0089	15.8	0.0	0.013	15.3	0.0	1.3	1	0	0	1	1	1	1	Propanediol	utilisation	protein	PduL
TOBE	PF03459.12	gi|332795899|ref|YP_004457399.1|	-	0.031	14.3	0.0	0.046	13.8	0.0	1.3	1	0	0	1	1	1	0	TOBE	domain
EcsC	PF12787.2	gi|332795899|ref|YP_004457399.1|	-	0.16	11.3	0.7	0.16	11.3	0.5	1.0	1	0	0	1	1	1	0	EcsC	protein	family
PIN	PF01850.16	gi|332795900|ref|YP_004457400.1|	-	1.2e-09	38.5	0.6	1.7e-09	38.0	0.4	1.2	1	0	0	1	1	1	1	PIN	domain
CobN-Mg_chel	PF02514.11	gi|332795900|ref|YP_004457400.1|	-	0.012	12.9	0.0	0.013	12.9	0.0	1.0	1	0	0	1	1	1	0	CobN/Magnesium	Chelatase
EF-hand_2	PF09068.6	gi|332795900|ref|YP_004457400.1|	-	0.068	13.2	0.2	0.1	12.6	0.1	1.3	1	0	0	1	1	1	0	EF	hand
Mucin	PF01456.12	gi|332795901|ref|YP_004457401.1|	-	0.012	15.3	17.2	0.025	14.3	11.9	1.4	1	0	0	1	1	1	0	Mucin-like	glycoprotein
Alpha_GJ	PF03229.8	gi|332795901|ref|YP_004457401.1|	-	0.045	14.0	5.5	0.081	13.2	3.8	1.4	1	0	0	1	1	1	0	Alphavirus	glycoprotein	J
DUF966	PF06136.8	gi|332795901|ref|YP_004457401.1|	-	0.22	10.9	1.5	0.35	10.2	1.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF966)
Creatininase	PF02633.9	gi|332795902|ref|YP_004457402.1|	-	1.1e-41	142.4	0.0	1.4e-41	142.1	0.0	1.1	1	0	0	1	1	1	1	Creatinine	amidohydrolase
Nitro_FeMo-Co	PF02579.12	gi|332795903|ref|YP_004457403.1|	-	0.0052	16.8	0.0	0.0071	16.3	0.0	1.2	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
DUF22	PF01629.11	gi|332795903|ref|YP_004457403.1|	-	0.032	13.7	0.0	4.1	6.9	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF22
FGF	PF00167.13	gi|332795903|ref|YP_004457403.1|	-	0.063	13.0	0.0	1.2	8.9	0.0	2.0	2	0	0	2	2	2	0	Fibroblast	growth	factor
DUF95	PF01944.12	gi|332795903|ref|YP_004457403.1|	-	0.083	12.5	0.0	0.11	12.0	0.0	1.1	1	0	0	1	1	1	0	Integral	membrane	protein	DUF95
MFS_1	PF07690.11	gi|332795904|ref|YP_004457404.1|	-	5.7e-29	100.9	48.6	1.2e-16	60.3	19.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332795904|ref|YP_004457404.1|	-	5.3e-07	28.1	1.0	5.3e-07	28.1	0.7	2.0	2	0	0	2	2	2	1	Transmembrane	secretion	effector
UNC-93	PF05978.11	gi|332795904|ref|YP_004457404.1|	-	0.0034	16.8	4.2	0.0034	16.8	2.9	3.7	2	2	2	4	4	4	1	Ion	channel	regulatory	protein	UNC-93
Sugar_tr	PF00083.19	gi|332795904|ref|YP_004457404.1|	-	0.95	7.9	40.9	4	5.9	13.1	3.1	2	1	0	2	2	2	0	Sugar	(and	other)	transporter
Methyltransf_11	PF08241.7	gi|332795905|ref|YP_004457405.1|	-	5.5e-10	39.5	0.0	7.7e-10	39.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|332795905|ref|YP_004457405.1|	-	0.00096	18.9	0.0	0.0013	18.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332795905|ref|YP_004457405.1|	-	0.0028	17.2	0.3	0.011	15.3	0.2	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|332795905|ref|YP_004457405.1|	-	0.003	17.2	0.3	0.036	13.7	0.2	2.0	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_16	PF10294.4	gi|332795905|ref|YP_004457405.1|	-	0.0046	16.4	0.2	0.0096	15.3	0.1	1.4	1	1	0	1	1	1	1	Putative	methyltransferase
Methyltransf_12	PF08242.7	gi|332795905|ref|YP_004457405.1|	-	0.009	16.4	0.0	0.014	15.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_9	PF08003.6	gi|332795905|ref|YP_004457405.1|	-	0.076	11.7	0.0	0.092	11.4	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Methyltransf_18	PF12847.2	gi|332795905|ref|YP_004457405.1|	-	0.08	13.5	0.0	0.44	11.1	0.0	2.0	1	1	0	1	1	1	0	Methyltransferase	domain
DUF3800	PF12686.2	gi|332795906|ref|YP_004457406.1|	-	1.7e-06	27.8	3.6	2.1e-06	27.5	2.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3800)
PhoH	PF02562.11	gi|332795907|ref|YP_004457407.1|	-	2.8e-43	147.5	0.0	4.1e-43	147.0	0.0	1.2	1	0	0	1	1	1	1	PhoH-like	protein
KH_5	PF13184.1	gi|332795907|ref|YP_004457407.1|	-	1.8e-08	34.0	4.3	1.6e-07	31.0	0.3	3.0	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_1	PF00013.24	gi|332795907|ref|YP_004457407.1|	-	6.4e-07	28.9	3.3	6e-06	25.8	0.4	2.7	2	0	0	2	2	2	1	KH	domain
KH_2	PF07650.12	gi|332795907|ref|YP_004457407.1|	-	5.1e-06	25.9	7.2	5.7e-06	25.8	1.4	2.7	1	1	1	2	2	2	1	KH	domain
KH_3	PF13014.1	gi|332795907|ref|YP_004457407.1|	-	2.4e-05	23.8	3.9	0.00038	20.0	0.1	2.9	2	0	0	2	2	2	1	KH	domain
AAA_22	PF13401.1	gi|332795907|ref|YP_004457407.1|	-	0.00024	21.2	0.0	0.00068	19.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|332795907|ref|YP_004457407.1|	-	0.0046	16.1	0.3	0.011	14.8	0.2	1.8	1	1	0	1	1	1	1	KaiC
AAA_30	PF13604.1	gi|332795907|ref|YP_004457407.1|	-	0.011	15.3	0.0	0.04	13.4	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|332795907|ref|YP_004457407.1|	-	0.014	15.3	0.3	0.19	11.6	0.2	2.3	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|332795907|ref|YP_004457407.1|	-	0.014	14.8	0.0	0.029	13.7	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
KH_4	PF13083.1	gi|332795907|ref|YP_004457407.1|	-	0.015	14.9	1.8	0.074	12.6	0.1	2.8	2	0	0	2	2	2	0	KH	domain
DEAD	PF00270.24	gi|332795907|ref|YP_004457407.1|	-	0.015	14.7	0.0	0.027	13.9	0.0	1.4	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
Arch_ATPase	PF01637.13	gi|332795907|ref|YP_004457407.1|	-	0.035	13.8	0.4	0.035	13.8	0.3	1.9	2	1	0	2	2	2	0	Archaeal	ATPase
ResIII	PF04851.10	gi|332795907|ref|YP_004457407.1|	-	0.041	13.7	0.0	0.061	13.1	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
T2SE	PF00437.15	gi|332795907|ref|YP_004457407.1|	-	0.055	12.3	0.0	0.1	11.4	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|332795907|ref|YP_004457407.1|	-	1.1	10.1	5.8	5.5	7.8	4.0	2.5	1	1	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|332795908|ref|YP_004457408.1|	-	7.1e-07	28.8	0.2	9.5e-07	28.4	0.1	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.4	gi|332795908|ref|YP_004457408.1|	-	4.4e-06	26.4	0.0	7.7e-06	25.7	0.0	1.5	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
AAA_31	PF13614.1	gi|332795908|ref|YP_004457408.1|	-	8.4e-05	22.5	0.1	0.00088	19.2	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|332795908|ref|YP_004457408.1|	-	0.022	13.8	1.7	0.55	9.2	0.7	2.1	1	1	0	2	2	2	0	Anion-transporting	ATPase
MoCF_biosynth	PF00994.19	gi|332795908|ref|YP_004457408.1|	-	0.022	14.1	0.1	0.04	13.3	0.1	1.4	1	0	0	1	1	1	0	Probable	molybdopterin	binding	domain
HypA	PF01155.14	gi|332795909|ref|YP_004457409.1|	-	1.6e-26	92.2	0.0	1.9e-26	91.9	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
TF_Zn_Ribbon	PF08271.7	gi|332795909|ref|YP_004457409.1|	-	0.00058	19.1	0.7	0.52	9.6	0.0	2.4	2	0	0	2	2	2	2	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.5	gi|332795909|ref|YP_004457409.1|	-	0.00096	19.0	0.6	0.51	10.3	0.1	2.3	2	0	0	2	2	2	1	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332795909|ref|YP_004457409.1|	-	0.0013	18.1	3.0	0.58	9.7	0.0	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332795909|ref|YP_004457409.1|	-	0.0018	17.4	2.0	0.41	9.9	0.1	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332795909|ref|YP_004457409.1|	-	0.0023	17.5	1.3	1.7	8.3	0.2	2.2	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
Lar_restr_allev	PF14354.1	gi|332795909|ref|YP_004457409.1|	-	0.0036	17.5	0.5	0.39	11.0	0.3	2.2	1	1	0	1	1	1	1	Restriction	alleviation	protein	Lar
PyrI_C	PF02748.10	gi|332795909|ref|YP_004457409.1|	-	0.0038	16.6	0.4	0.3	10.5	0.1	2.4	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-BED	PF02892.10	gi|332795909|ref|YP_004457409.1|	-	0.011	15.4	0.3	0.61	9.8	0.0	2.2	2	0	0	2	2	2	0	BED	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|332795909|ref|YP_004457409.1|	-	0.021	14.6	0.2	7.9	6.3	0.0	2.2	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|332795909|ref|YP_004457409.1|	-	0.029	14.4	0.1	8.2	6.5	0.0	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-H2C2_2	PF13465.1	gi|332795909|ref|YP_004457409.1|	-	0.048	13.9	5.5	0.81	10.1	0.9	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF3797	PF12677.2	gi|332795909|ref|YP_004457409.1|	-	0.051	13.1	0.1	9.2	5.9	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zinc_ribbon_5	PF13719.1	gi|332795909|ref|YP_004457409.1|	-	0.057	13.0	4.5	0.25	10.9	0.0	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|332795909|ref|YP_004457409.1|	-	0.063	13.6	4.4	0.47	10.9	0.4	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DNA_RNApol_7kD	PF03604.8	gi|332795909|ref|YP_004457409.1|	-	0.066	12.6	0.8	6.6	6.3	0.1	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_4	PF13717.1	gi|332795909|ref|YP_004457409.1|	-	0.15	11.8	5.1	0.41	10.3	0.1	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-DNA_Pol	PF08996.5	gi|332795909|ref|YP_004457409.1|	-	0.15	11.3	0.5	0.35	10.2	0.4	1.7	1	1	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
zinc_ribbon_6	PF14599.1	gi|332795909|ref|YP_004457409.1|	-	0.17	11.6	1.1	5.8	6.7	0.1	2.7	2	1	0	2	2	2	0	Zinc-ribbon
zf-trcl	PF13451.1	gi|332795909|ref|YP_004457409.1|	-	0.17	11.5	1.7	0.55	9.9	0.3	2.0	2	0	0	2	2	2	0	Probable	zinc-binding	domain
UPF0547	PF10571.4	gi|332795909|ref|YP_004457409.1|	-	0.2	11.3	2.4	9.3	6.0	0.1	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-CHCC	PF10276.4	gi|332795909|ref|YP_004457409.1|	-	0.22	11.4	2.0	1.1	9.0	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	domain
zf-AN1	PF01428.11	gi|332795909|ref|YP_004457409.1|	-	0.22	11.4	3.0	0.76	9.6	0.4	2.1	2	0	0	2	2	2	0	AN1-like	Zinc	finger
Cys_rich_CPXG	PF14255.1	gi|332795909|ref|YP_004457409.1|	-	0.25	11.1	2.5	1.3	8.8	0.9	2.5	2	1	0	2	2	2	0	Cysteine-rich	CPXCG
Zn_Tnp_IS1	PF03811.8	gi|332795909|ref|YP_004457409.1|	-	0.27	10.7	1.9	4.8	6.7	0.1	2.3	2	0	0	2	2	2	0	InsA	N-terminal	domain
Sgf11	PF08209.6	gi|332795909|ref|YP_004457409.1|	-	0.28	10.5	1.8	2.3	7.5	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-C2HC_2	PF13913.1	gi|332795909|ref|YP_004457409.1|	-	4	7.2	7.8	11	5.8	0.4	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-C2H2_6	PF13912.1	gi|332795909|ref|YP_004457409.1|	-	4.8	7.2	6.0	0.45	10.4	0.6	1.8	2	0	0	2	2	2	0	C2H2-type	zinc	finger
PhnA_Zn_Ribbon	PF08274.7	gi|332795909|ref|YP_004457409.1|	-	5.1	6.9	5.2	20	5.0	0.0	2.5	3	0	0	3	3	2	0	PhnA	Zinc-Ribbon
zf-CCHC	PF00098.18	gi|332795909|ref|YP_004457409.1|	-	9.1	6.4	7.8	20	5.3	1.9	2.4	2	0	0	2	2	2	0	Zinc	knuckle
DUF364	PF04016.7	gi|332795910|ref|YP_004457410.1|	-	1.1e-41	141.5	0.1	1.7e-41	141.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|332795910|ref|YP_004457410.1|	-	1.3e-18	66.9	0.2	6.4e-18	64.6	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4213)
Lactamase_B	PF00753.22	gi|332795911|ref|YP_004457411.1|	-	6e-12	45.6	1.5	8.5e-12	45.1	1.0	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332795911|ref|YP_004457411.1|	-	4.9e-05	22.9	0.0	6.7e-05	22.5	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|332795911|ref|YP_004457411.1|	-	0.00069	19.3	0.0	0.0015	18.2	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
NicO	PF03824.11	gi|332795912|ref|YP_004457412.1|	-	2.3e-24	86.1	0.0	2.7e-24	85.9	0.0	1.0	1	0	0	1	1	1	1	High-affinity	nickel-transport	protein
OrfB_Zn_ribbon	PF07282.6	gi|332795913|ref|YP_004457413.1|	-	1.6e-19	69.3	1.5	2.3e-19	68.7	0.3	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332795913|ref|YP_004457413.1|	-	3e-07	30.0	0.9	3e-07	30.0	0.6	1.6	2	0	0	2	2	2	1	Probable	transposase
zf-RING_4	PF14570.1	gi|332795913|ref|YP_004457413.1|	-	0.08	12.5	3.7	0.082	12.5	1.5	1.7	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
CpXC	PF14353.1	gi|332795913|ref|YP_004457413.1|	-	0.16	11.9	0.4	4.3	7.3	0.0	2.7	3	0	0	3	3	3	0	CpXC	protein
DUF2371	PF10177.4	gi|332795916|ref|YP_004457416.1|	-	0.032	14.1	3.5	0.1	12.4	0.1	2.5	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
DUF3523	PF12037.3	gi|332795916|ref|YP_004457416.1|	-	0.038	12.9	1.5	0.044	12.7	0.2	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3523)
CBS	PF00571.23	gi|332795917|ref|YP_004457417.1|	-	4.8e-11	42.2	1.4	1.3e-07	31.2	0.1	2.2	2	0	0	2	2	2	2	CBS	domain
DUF2726	PF10881.3	gi|332795917|ref|YP_004457417.1|	-	0.019	14.5	0.0	0.027	14.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2726)
CodY	PF06018.9	gi|332795917|ref|YP_004457417.1|	-	0.1	11.8	0.8	0.23	10.7	0.2	1.7	1	1	1	2	2	2	0	CodY	GAF-like	domain
DUF4342	PF14242.1	gi|332795917|ref|YP_004457417.1|	-	0.39	10.5	7.8	1.7	8.4	0.5	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4342)
FtsL	PF04999.8	gi|332795918|ref|YP_004457418.1|	-	0.35	10.6	0.0	0.35	10.6	0.0	2.0	2	0	0	2	2	2	0	Cell	division	protein	FtsL
DUF3353	PF11833.3	gi|332795918|ref|YP_004457418.1|	-	0.55	9.6	5.1	1	8.7	3.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3353)
DUF373	PF04123.8	gi|332795918|ref|YP_004457418.1|	-	6.1	5.7	16.7	39	3.1	11.2	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DUF1641	PF07849.6	gi|332795919|ref|YP_004457419.1|	-	5.4e-08	32.3	0.5	2.2e-07	30.3	0.0	2.2	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1641)
MgtE_N	PF03448.12	gi|332795919|ref|YP_004457419.1|	-	0.013	15.8	0.1	0.24	11.7	0.0	2.2	2	0	0	2	2	2	0	MgtE	intracellular	N	domain
Pyr_redox_2	PF07992.9	gi|332795920|ref|YP_004457420.1|	-	6.5e-15	55.5	0.0	1.1e-14	54.8	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|332795920|ref|YP_004457420.1|	-	0.00055	19.7	0.0	0.042	13.6	0.0	2.4	2	0	0	2	2	2	1	FAD-NAD(P)-binding
NAD_binding_8	PF13450.1	gi|332795920|ref|YP_004457420.1|	-	0.014	15.3	0.1	0.043	13.8	0.0	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
TcpF	PF06340.6	gi|332795920|ref|YP_004457420.1|	-	0.021	13.9	0.0	0.031	13.3	0.0	1.2	1	0	0	1	1	1	0	Vibrio	cholerae	toxin	co-regulated	pilus	biosynthesis	protein	F
Trp_halogenase	PF04820.9	gi|332795920|ref|YP_004457420.1|	-	0.044	12.4	0.0	0.063	11.9	0.0	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
DAO	PF01266.19	gi|332795920|ref|YP_004457420.1|	-	0.1	11.4	0.2	0.15	10.9	0.2	1.4	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|332795920|ref|YP_004457420.1|	-	0.12	11.2	0.1	1.4	7.7	0.0	2.2	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
TusA	PF01206.12	gi|332795921|ref|YP_004457421.1|	-	2.3e-05	23.9	0.0	2.4e-05	23.8	0.0	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
Fer4	PF00037.22	gi|332795922|ref|YP_004457422.1|	-	6.9e-20	69.7	43.5	1.2e-08	34.1	3.2	6.1	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|332795922|ref|YP_004457422.1|	-	4.5e-16	58.9	38.7	1.2e-08	35.2	7.6	3.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332795922|ref|YP_004457422.1|	-	1.5e-14	53.1	45.4	2.6e-06	27.0	2.2	5.7	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|332795922|ref|YP_004457422.1|	-	1.8e-12	47.3	40.1	5.6e-07	29.7	7.1	4.6	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332795922|ref|YP_004457422.1|	-	2.4e-12	45.9	39.9	0.00018	21.2	2.1	6.1	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|332795922|ref|YP_004457422.1|	-	5.4e-12	46.2	32.2	0.00022	21.9	1.2	5.0	4	1	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|332795922|ref|YP_004457422.1|	-	1.3e-11	44.1	44.5	5.7e-06	26.0	8.2	4.8	3	2	2	5	5	5	4	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332795922|ref|YP_004457422.1|	-	5.3e-11	42.1	46.1	7.6e-07	28.8	7.3	4.3	3	2	2	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332795922|ref|YP_004457422.1|	-	3.2e-10	39.8	29.5	0.00017	21.5	7.3	4.7	3	2	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332795922|ref|YP_004457422.1|	-	3.8e-08	33.5	30.4	0.0074	16.6	0.6	5.2	4	1	0	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|332795922|ref|YP_004457422.1|	-	2.5e-07	30.9	30.7	0.008	16.5	0.6	5.0	5	1	0	5	5	4	4	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|332795922|ref|YP_004457422.1|	-	4.6e-05	23.4	55.1	0.011	15.9	2.3	6.4	7	0	0	7	7	6	4	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|332795922|ref|YP_004457422.1|	-	0.00041	20.8	24.1	0.023	15.2	1.1	4.8	4	0	0	4	4	4	3	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|332795922|ref|YP_004457422.1|	-	0.0042	16.9	2.6	0.0042	16.9	1.8	3.7	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332795922|ref|YP_004457422.1|	-	0.049	14.2	3.5	0.049	14.2	2.5	5.5	7	0	0	7	7	4	0	4Fe-4S	binding	domain
Nitrate_red_del	PF02613.10	gi|332795923|ref|YP_004457423.1|	-	1.2e-05	25.1	0.0	2.1e-05	24.3	0.0	1.6	1	1	0	1	1	1	1	Nitrate	reductase	delta	subunit
Nsp1_C	PF05064.8	gi|332795923|ref|YP_004457423.1|	-	0.028	14.0	1.1	5.2	6.7	0.1	2.4	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
DUF1693	PF07984.7	gi|332795923|ref|YP_004457423.1|	-	0.059	12.5	1.0	1.3	8.1	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1693)
Phage_Mu_Gam	PF07352.7	gi|332795923|ref|YP_004457423.1|	-	0.22	11.0	1.7	0.72	9.3	0.1	2.1	2	0	0	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
Fer4_11	PF13247.1	gi|332795924|ref|YP_004457424.1|	-	6.7e-27	93.2	4.1	6.7e-27	93.2	2.9	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332795924|ref|YP_004457424.1|	-	5.4e-15	55.5	6.6	2.8e-07	30.7	1.1	3.0	1	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332795924|ref|YP_004457424.1|	-	2.7e-13	49.9	12.0	9.5e-07	28.9	0.6	2.9	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332795924|ref|YP_004457424.1|	-	2.7e-08	33.4	19.8	0.00014	21.5	5.0	3.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332795924|ref|YP_004457424.1|	-	4.4e-06	26.8	32.8	0.033	14.7	4.2	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|332795924|ref|YP_004457424.1|	-	6.3e-05	22.3	31.8	0.02	14.5	0.7	5.3	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|332795924|ref|YP_004457424.1|	-	9.4e-05	23.0	16.2	0.31	11.8	0.4	4.4	3	1	1	4	4	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|332795924|ref|YP_004457424.1|	-	0.00089	19.2	4.1	0.00089	19.2	2.8	3.5	2	1	2	4	4	4	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332795924|ref|YP_004457424.1|	-	0.00092	18.9	32.8	0.0035	17.1	0.9	5.3	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|332795924|ref|YP_004457424.1|	-	0.0059	16.8	30.6	0.31	11.4	2.5	5.0	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|332795924|ref|YP_004457424.1|	-	0.023	14.5	36.7	0.088	12.7	3.0	5.2	5	1	0	5	5	5	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332795924|ref|YP_004457424.1|	-	0.033	14.5	18.9	1.1	9.6	0.5	4.4	3	1	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332795924|ref|YP_004457424.1|	-	2.9	7.8	24.6	0.28	11.0	0.4	3.4	4	1	0	4	4	4	0	4Fe-4S	dicluster	domain
Molydop_binding	PF01568.16	gi|332795925|ref|YP_004457425.1|	-	1.3e-08	34.6	0.0	4.5e-08	32.8	0.0	2.0	1	1	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdopterin	PF00384.17	gi|332795925|ref|YP_004457425.1|	-	4.8e-06	25.5	0.0	0.1	11.3	0.0	3.5	4	0	0	4	4	4	2	Molybdopterin	oxidoreductase
Molybdop_Fe4S4	PF04879.11	gi|332795925|ref|YP_004457425.1|	-	0.0048	16.6	0.4	0.0096	15.7	0.3	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
TAT_signal	PF10518.4	gi|332795925|ref|YP_004457425.1|	-	0.11	12.4	0.1	0.27	11.3	0.0	1.6	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
NrfD	PF03916.9	gi|332795926|ref|YP_004457426.1|	-	2.8e-31	109.0	28.5	3.8e-31	108.6	19.8	1.1	1	0	0	1	1	1	1	Polysulphide	reductase,	NrfD
HTH_45	PF14947.1	gi|332795927|ref|YP_004457427.1|	-	0.00038	20.2	0.6	0.0017	18.1	0.2	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|332795927|ref|YP_004457427.1|	-	0.0027	17.0	0.4	0.015	14.6	0.1	2.5	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|332795927|ref|YP_004457427.1|	-	0.0063	16.1	0.5	0.016	14.8	0.1	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DoxD	PF04173.8	gi|332795928|ref|YP_004457428.1|	-	1e-66	223.7	3.8	1.1e-66	223.5	2.6	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|332795928|ref|YP_004457428.1|	-	0.0044	17.4	10.8	0.0044	17.4	7.5	2.1	2	1	0	2	2	2	1	DoxX
DoxA	PF07680.6	gi|332795929|ref|YP_004457429.1|	-	2.5e-50	169.5	0.1	3e-50	169.3	0.0	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxA
PPC	PF04151.10	gi|332795929|ref|YP_004457429.1|	-	0.053	14.5	0.1	0.2	12.6	0.0	2.0	1	1	0	1	1	1	0	Bacterial	pre-peptidase	C-terminal	domain
Ubie_methyltran	PF01209.13	gi|332795930|ref|YP_004457430.1|	-	1.3e-20	73.5	1.0	2.3e-20	72.7	0.7	1.4	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|332795930|ref|YP_004457430.1|	-	9.4e-13	48.4	0.1	1.5e-12	47.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332795930|ref|YP_004457430.1|	-	4.8e-08	32.7	0.0	1.9e-07	30.7	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332795930|ref|YP_004457430.1|	-	1.1e-06	28.9	0.0	3.9e-06	27.1	0.0	1.9	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332795930|ref|YP_004457430.1|	-	8.9e-06	26.1	0.1	2.3e-05	24.8	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
MetW	PF07021.7	gi|332795930|ref|YP_004457430.1|	-	6.7e-05	22.3	0.0	0.00011	21.6	0.0	1.4	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.2	gi|332795930|ref|YP_004457430.1|	-	0.0003	21.3	0.0	0.0015	19.0	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|332795930|ref|YP_004457430.1|	-	0.011	15.4	0.0	0.015	15.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|332795930|ref|YP_004457430.1|	-	0.016	14.5	0.0	0.032	13.6	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_32	PF13679.1	gi|332795930|ref|YP_004457430.1|	-	0.071	12.7	0.0	0.13	11.8	0.0	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
MttA_Hcf106	PF02416.11	gi|332795931|ref|YP_004457431.1|	-	2.7e-10	39.2	8.3	1.1e-09	37.2	5.7	2.0	1	1	0	1	1	1	1	mttA/Hcf106	family
CHD5	PF04420.9	gi|332795931|ref|YP_004457431.1|	-	3.9e-05	23.3	3.7	4.5e-05	23.1	2.6	1.0	1	0	0	1	1	1	1	CHD5-like	protein
DUF3450	PF11932.3	gi|332795931|ref|YP_004457431.1|	-	0.0014	17.9	7.4	0.0014	17.9	5.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3450)
DUF3573	PF12097.3	gi|332795931|ref|YP_004457431.1|	-	0.0031	16.1	3.4	0.0032	16.1	2.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3573)
DUF1510	PF07423.6	gi|332795931|ref|YP_004457431.1|	-	0.0041	16.5	1.2	0.0048	16.2	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1510)
CENP-F_leu_zip	PF10473.4	gi|332795931|ref|YP_004457431.1|	-	0.011	15.6	12.4	0.014	15.2	8.6	1.1	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
MMR1	PF08505.5	gi|332795931|ref|YP_004457431.1|	-	0.025	14.6	3.9	0.024	14.6	2.7	1.0	1	0	0	1	1	1	0	Mitochondrial	Myo2	receptor-related	protein
V_ATPase_I	PF01496.14	gi|332795931|ref|YP_004457431.1|	-	0.028	12.3	1.6	0.028	12.3	1.1	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Uds1	PF15456.1	gi|332795931|ref|YP_004457431.1|	-	0.036	14.0	6.1	0.038	13.9	4.2	1.1	1	0	0	1	1	1	0	Up-regulated	During	Septation
LMBR1	PF04791.11	gi|332795931|ref|YP_004457431.1|	-	0.036	12.6	0.4	0.041	12.4	0.3	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Ycf1	PF05758.7	gi|332795931|ref|YP_004457431.1|	-	0.051	11.2	2.9	0.058	11.1	2.0	1.0	1	0	0	1	1	1	0	Ycf1
OmpH	PF03938.9	gi|332795931|ref|YP_004457431.1|	-	0.071	13.0	13.8	0.074	12.9	9.6	1.1	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Cauli_AT	PF03233.8	gi|332795931|ref|YP_004457431.1|	-	0.073	12.7	0.7	0.078	12.6	0.5	1.1	1	0	0	1	1	1	0	Aphid	transmission	protein
PetL	PF05115.9	gi|332795931|ref|YP_004457431.1|	-	0.094	12.6	0.9	0.13	12.1	0.6	1.2	1	0	0	1	1	1	0	Cytochrome	B6-F	complex	subunit	VI	(PetL)
DUF4446	PF14584.1	gi|332795931|ref|YP_004457431.1|	-	0.21	11.4	6.4	0.39	10.5	4.4	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Mnd1	PF03962.10	gi|332795931|ref|YP_004457431.1|	-	0.25	10.9	9.5	0.27	10.8	6.6	1.1	1	0	0	1	1	1	0	Mnd1	family
Cytochrom_B562	PF07361.6	gi|332795931|ref|YP_004457431.1|	-	0.26	11.7	9.4	0.35	11.2	6.4	1.3	1	1	0	1	1	1	0	Cytochrome	b562
Allexi_40kDa	PF05549.6	gi|332795931|ref|YP_004457431.1|	-	0.28	10.4	2.6	0.28	10.4	1.8	1.0	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
DUF4140	PF13600.1	gi|332795931|ref|YP_004457431.1|	-	0.49	10.8	8.5	0.65	10.4	5.9	1.2	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
Phage_GPO	PF05929.6	gi|332795931|ref|YP_004457431.1|	-	0.69	9.1	9.4	0.78	8.9	6.5	1.0	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
AAA_23	PF13476.1	gi|332795931|ref|YP_004457431.1|	-	0.85	9.9	9.5	0.88	9.8	6.6	1.1	1	0	0	1	1	1	0	AAA	domain
DUF4407	PF14362.1	gi|332795931|ref|YP_004457431.1|	-	1	8.2	14.9	1.6	7.6	10.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF2681	PF10883.3	gi|332795931|ref|YP_004457431.1|	-	1.3	9.3	21.7	0.78	9.9	2.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2681)
MerR-DNA-bind	PF09278.6	gi|332795931|ref|YP_004457431.1|	-	1.3	9.5	9.8	2	8.8	6.8	1.4	1	1	0	1	1	1	0	MerR,	DNA	binding
Atg14	PF10186.4	gi|332795931|ref|YP_004457431.1|	-	1.3	7.8	12.7	1.5	7.6	8.8	1.0	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Ax_dynein_light	PF10211.4	gi|332795931|ref|YP_004457431.1|	-	1.7	8.4	14.1	2.1	8.1	9.7	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
HR1	PF02185.11	gi|332795931|ref|YP_004457431.1|	-	2.3	8.0	18.0	4.3	7.1	12.5	1.5	1	1	0	1	1	1	0	Hr1	repeat
FemAB	PF02388.11	gi|332795931|ref|YP_004457431.1|	-	2.7	6.5	9.4	3	6.4	6.5	1.0	1	0	0	1	1	1	0	FemAB	family
DUF2937	PF11157.3	gi|332795931|ref|YP_004457431.1|	-	3.9	6.7	10.0	2.5	7.4	6.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2937)
EAP30	PF04157.11	gi|332795931|ref|YP_004457431.1|	-	8.1	5.5	18.3	11	5.1	12.7	1.1	1	0	0	1	1	1	0	EAP30/Vps36	family
DUF2968	PF11180.3	gi|332795931|ref|YP_004457431.1|	-	8.3	5.7	22.1	9.7	5.5	15.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
MttA_Hcf106	PF02416.11	gi|332795932|ref|YP_004457432.1|	-	6.9e-06	25.0	1.8	1.2e-05	24.3	1.2	1.6	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF4618	PF15397.1	gi|332795932|ref|YP_004457432.1|	-	0.0042	16.4	3.2	0.0071	15.7	2.2	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4618)
Erp_C	PF06780.6	gi|332795932|ref|YP_004457432.1|	-	0.0046	16.7	4.9	0.0059	16.4	3.4	1.1	1	0	0	1	1	1	1	Erp	protein	C-terminus
DNA_topoisoIV	PF00521.15	gi|332795932|ref|YP_004457432.1|	-	0.0049	15.7	1.4	0.006	15.4	1.0	1.0	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DUF948	PF06103.6	gi|332795932|ref|YP_004457432.1|	-	0.0064	16.3	1.3	3.1	7.7	0.2	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
TSC22	PF01166.13	gi|332795932|ref|YP_004457432.1|	-	0.0077	16.1	3.5	0.014	15.3	0.3	2.1	2	0	0	2	2	2	1	TSC-22/dip/bun	family
FlxA	PF14282.1	gi|332795932|ref|YP_004457432.1|	-	0.012	15.5	0.5	0.027	14.4	0.1	1.6	2	0	0	2	2	2	0	FlxA-like	protein
BLOC1_2	PF10046.4	gi|332795932|ref|YP_004457432.1|	-	0.014	15.5	3.2	0.42	10.7	0.5	2.1	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF1043	PF06295.7	gi|332795932|ref|YP_004457432.1|	-	0.014	14.9	0.5	0.019	14.6	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1043)
GAPT	PF11770.3	gi|332795932|ref|YP_004457432.1|	-	0.015	14.9	0.6	0.016	14.8	0.4	1.3	1	1	0	1	1	1	0	GRB2-binding	adapter	(GAPT)
Dor1	PF04124.7	gi|332795932|ref|YP_004457432.1|	-	0.016	13.6	0.7	0.02	13.3	0.5	1.0	1	0	0	1	1	1	0	Dor1-like	family
V-SNARE	PF05008.10	gi|332795932|ref|YP_004457432.1|	-	0.016	15.3	3.4	0.026	14.6	2.4	1.3	1	0	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF1192	PF06698.6	gi|332795932|ref|YP_004457432.1|	-	0.032	14.0	1.7	0.041	13.6	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
DUF793	PF05633.6	gi|332795932|ref|YP_004457432.1|	-	0.034	12.9	2.4	0.041	12.6	1.7	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF793)
TMF_DNA_bd	PF12329.3	gi|332795932|ref|YP_004457432.1|	-	0.046	13.5	3.8	0.046	13.5	2.6	2.1	2	1	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
LUC7	PF03194.10	gi|332795932|ref|YP_004457432.1|	-	0.066	12.7	3.3	0.13	11.7	1.9	1.6	1	1	0	1	1	1	0	LUC7	N_terminus
DUF972	PF06156.8	gi|332795932|ref|YP_004457432.1|	-	0.067	13.5	1.4	1.1	9.6	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
FTA2	PF13095.1	gi|332795932|ref|YP_004457432.1|	-	0.067	12.7	0.2	0.08	12.5	0.1	1.1	1	0	0	1	1	1	0	Kinetochore	Sim4	complex	subunit	FTA2
Atg14	PF10186.4	gi|332795932|ref|YP_004457432.1|	-	0.068	12.1	1.6	0.084	11.8	1.1	1.1	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF4200	PF13863.1	gi|332795932|ref|YP_004457432.1|	-	0.073	13.0	7.3	1.4	8.9	5.1	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
DUF1512	PF07431.7	gi|332795932|ref|YP_004457432.1|	-	0.081	11.6	0.2	0.084	11.6	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1512)
DUF4140	PF13600.1	gi|332795932|ref|YP_004457432.1|	-	0.081	13.3	1.2	0.11	12.9	0.2	1.6	1	1	1	2	2	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
GrpE	PF01025.14	gi|332795932|ref|YP_004457432.1|	-	0.083	12.4	7.2	0.72	9.3	0.3	2.0	1	1	1	2	2	2	0	GrpE
Cep57_CLD_2	PF14197.1	gi|332795932|ref|YP_004457432.1|	-	0.091	12.7	1.2	0.46	10.4	0.0	2.1	2	0	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
DMPK_coil	PF08826.5	gi|332795932|ref|YP_004457432.1|	-	0.11	12.4	0.3	0.11	12.4	0.2	2.0	2	1	0	2	2	2	0	DMPK	coiled	coil	domain	like
PilJ	PF13675.1	gi|332795932|ref|YP_004457432.1|	-	0.12	12.7	0.1	2.9	8.2	0.0	2.0	1	1	1	2	2	2	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
FlaC_arch	PF05377.6	gi|332795932|ref|YP_004457432.1|	-	0.12	12.3	0.7	0.12	12.3	0.5	2.1	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
MHC2-interact	PF09307.5	gi|332795932|ref|YP_004457432.1|	-	0.13	12.0	0.2	3.2	7.5	0.0	2.1	2	0	0	2	2	2	0	CLIP,	MHC2	interacting
DUF4047	PF13256.1	gi|332795932|ref|YP_004457432.1|	-	0.17	11.8	1.5	1.8	8.5	1.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4047)
Syntaxin-6_N	PF09177.6	gi|332795932|ref|YP_004457432.1|	-	0.19	12.1	2.3	0.7	10.3	1.6	1.8	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
ORF6C	PF10552.4	gi|332795932|ref|YP_004457432.1|	-	0.21	11.3	2.3	0.87	9.3	0.3	2.1	2	0	0	2	2	2	0	ORF6C	domain
DUF904	PF06005.7	gi|332795932|ref|YP_004457432.1|	-	0.21	11.8	3.9	0.32	11.3	0.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DivIC	PF04977.10	gi|332795932|ref|YP_004457432.1|	-	0.24	10.8	8.3	0.063	12.7	1.8	2.3	1	1	1	2	2	2	0	Septum	formation	initiator
Med9	PF07544.8	gi|332795932|ref|YP_004457432.1|	-	0.27	11.0	6.7	0.32	10.7	1.1	2.3	1	1	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
PhoU	PF01895.14	gi|332795932|ref|YP_004457432.1|	-	0.29	11.6	5.1	2.1	8.8	0.4	2.1	1	1	1	2	2	2	0	PhoU	domain
DUF1664	PF07889.7	gi|332795932|ref|YP_004457432.1|	-	0.3	10.8	2.1	0.61	9.9	1.5	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Lge1	PF11488.3	gi|332795932|ref|YP_004457432.1|	-	0.32	11.2	3.3	0.93	9.7	2.3	1.8	1	1	0	1	1	1	0	Transcriptional	regulatory	protein	LGE1
IMD	PF08397.6	gi|332795932|ref|YP_004457432.1|	-	0.35	10.1	4.6	0.78	9.0	3.2	1.5	1	1	0	1	1	1	0	IRSp53/MIM	homology	domain
Bap31	PF05529.7	gi|332795932|ref|YP_004457432.1|	-	0.37	10.2	4.3	0.15	11.5	1.1	1.6	1	1	1	2	2	2	0	B-cell	receptor-associated	protein	31-like
DUF3469	PF11952.3	gi|332795932|ref|YP_004457432.1|	-	0.41	10.3	1.7	1.6	8.4	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3469)
AKNA	PF12443.3	gi|332795932|ref|YP_004457432.1|	-	0.41	10.6	2.8	0.35	10.8	0.5	1.8	1	1	1	2	2	2	0	AT-hook-containing	transcription	factor
Fib_alpha	PF08702.5	gi|332795932|ref|YP_004457432.1|	-	0.42	10.7	4.1	0.89	9.6	2.9	1.5	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF4163	PF13739.1	gi|332795932|ref|YP_004457432.1|	-	0.59	10.9	3.1	0.42	11.4	0.5	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4163)
OPA3	PF07047.7	gi|332795932|ref|YP_004457432.1|	-	0.7	9.6	6.0	0.32	10.7	0.4	2.1	2	1	0	2	2	2	0	Optic	atrophy	3	protein	(OPA3)
bZIP_1	PF00170.16	gi|332795932|ref|YP_004457432.1|	-	0.84	9.6	5.3	0.59	10.1	1.7	1.9	2	0	0	2	2	2	0	bZIP	transcription	factor
Seryl_tRNA_N	PF02403.17	gi|332795932|ref|YP_004457432.1|	-	0.97	9.4	5.7	15	5.6	3.9	2.1	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
CENP-Q	PF13094.1	gi|332795932|ref|YP_004457432.1|	-	1.1	9.2	7.2	0.73	9.8	1.5	2.0	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DivIVA	PF05103.8	gi|332795932|ref|YP_004457432.1|	-	1.4	8.9	6.2	15	5.6	4.3	2.0	1	1	0	1	1	1	0	DivIVA	protein
Imm3	PF14425.1	gi|332795932|ref|YP_004457432.1|	-	1.5	8.8	6.1	1.6	8.7	0.5	2.1	1	1	1	2	2	2	0	Immunity	protein	Imm3
TMF_TATA_bd	PF12325.3	gi|332795932|ref|YP_004457432.1|	-	1.6	8.4	6.3	2.9	7.6	4.4	1.5	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
bZIP_2	PF07716.10	gi|332795932|ref|YP_004457432.1|	-	1.8	8.4	6.7	0.16	11.8	1.2	1.8	2	0	0	2	2	2	0	Basic	region	leucine	zipper
Prefoldin	PF02996.12	gi|332795932|ref|YP_004457432.1|	-	1.8	8.2	5.3	1.1	8.9	1.2	2.0	1	1	1	2	2	2	0	Prefoldin	subunit
Syntaxin	PF00804.20	gi|332795932|ref|YP_004457432.1|	-	3	8.0	6.4	5.5	7.2	0.8	2.0	1	1	0	1	1	1	0	Syntaxin
Prefoldin_2	PF01920.15	gi|332795932|ref|YP_004457432.1|	-	3.3	7.5	8.5	23	4.7	5.9	2.1	1	1	0	1	1	1	0	Prefoldin	subunit
Pox_A_type_inc	PF04508.7	gi|332795932|ref|YP_004457432.1|	-	4.7	7.2	7.9	7.5	6.6	0.7	3.3	2	1	1	3	3	3	0	Viral	A-type	inclusion	protein	repeat
TatC	PF00902.13	gi|332795933|ref|YP_004457433.1|	-	2.5e-46	157.7	19.5	3.7e-46	157.2	13.5	1.2	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Fer2_3	PF13085.1	gi|332795934|ref|YP_004457434.1|	-	1.8e-36	124.3	0.1	4.3e-36	123.0	0.0	1.7	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|332795934|ref|YP_004457434.1|	-	5.1e-10	39.2	2.1	1e-09	38.2	0.3	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332795934|ref|YP_004457434.1|	-	1.4e-07	31.7	7.3	7.2e-06	26.2	0.6	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332795934|ref|YP_004457434.1|	-	1.3e-05	24.9	1.0	1.3e-05	24.9	0.7	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332795934|ref|YP_004457434.1|	-	0.00012	22.2	9.5	0.00071	19.7	1.3	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332795934|ref|YP_004457434.1|	-	0.00013	22.2	4.8	0.00018	21.8	1.3	2.6	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|332795934|ref|YP_004457434.1|	-	0.00018	21.8	3.5	0.0015	18.9	0.1	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|332795934|ref|YP_004457434.1|	-	0.00063	19.2	1.6	0.00063	19.2	1.1	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer2	PF00111.22	gi|332795934|ref|YP_004457434.1|	-	0.0015	18.2	0.1	0.0015	18.2	0.1	2.4	3	0	0	3	3	3	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_21	PF14697.1	gi|332795934|ref|YP_004457434.1|	-	0.008	16.0	0.4	0.008	16.0	0.3	2.7	3	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332795934|ref|YP_004457434.1|	-	0.02	14.7	1.3	0.02	14.7	0.9	3.0	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|332795934|ref|YP_004457434.1|	-	0.022	15.0	1.0	0.022	15.0	0.7	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer2_4	PF13510.1	gi|332795934|ref|YP_004457434.1|	-	0.033	14.0	0.1	0.062	13.1	0.0	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_2	PF12797.2	gi|332795934|ref|YP_004457434.1|	-	0.088	12.7	1.4	0.088	12.7	0.9	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|332795934|ref|YP_004457434.1|	-	0.19	12.3	0.2	0.19	12.3	0.2	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|332795934|ref|YP_004457434.1|	-	0.41	11.4	9.8	0.78	10.5	1.3	3.0	2	1	2	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Sdh_cyt	PF01127.17	gi|332795935|ref|YP_004457435.1|	-	1.5e-06	28.0	11.2	2.8e-06	27.1	7.2	1.8	1	1	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
Ferric_reduct	PF01794.14	gi|332795935|ref|YP_004457435.1|	-	0.15	12.1	9.1	0.35	10.9	6.3	1.7	1	1	0	1	1	1	0	Ferric	reductase	like	transmembrane	component
Cytochrom_B_N	PF00033.14	gi|332795935|ref|YP_004457435.1|	-	0.17	11.2	12.1	0.64	9.3	1.0	2.1	1	1	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
Tetraspannin	PF00335.15	gi|332795935|ref|YP_004457435.1|	-	0.3	10.3	2.8	0.4	9.9	2.0	1.2	1	0	0	1	1	1	0	Tetraspanin	family
DUF4212	PF13937.1	gi|332795935|ref|YP_004457435.1|	-	1.1	9.3	7.9	0.23	11.5	0.4	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4212)
Ni_hydr_CYTB	PF01292.15	gi|332795935|ref|YP_004457435.1|	-	1.6	8.1	11.3	11	5.3	7.8	2.0	1	1	0	1	1	1	0	Prokaryotic	cytochrome	b561
SdpI	PF13630.1	gi|332795935|ref|YP_004457435.1|	-	5.8	6.6	9.8	1	9.0	0.8	2.4	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
Sdh_cyt	PF01127.17	gi|332795936|ref|YP_004457436.1|	-	1.5e-11	44.1	4.0	1.7e-11	43.9	2.8	1.1	1	0	0	1	1	1	1	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
ABC_membrane_2	PF06472.10	gi|332795936|ref|YP_004457436.1|	-	0.025	13.7	0.4	0.034	13.2	0.3	1.2	1	0	0	1	1	1	0	ABC	transporter	transmembrane	region	2
DUF805	PF05656.9	gi|332795936|ref|YP_004457436.1|	-	1.2	8.9	6.3	3.2	7.6	4.4	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
2TM	PF13239.1	gi|332795936|ref|YP_004457436.1|	-	6.2	6.9	6.1	0.67	10.0	0.3	2.2	1	1	2	3	3	3	0	2TM	domain
YwiC	PF14256.1	gi|332795938|ref|YP_004457438.1|	-	1.8	8.6	10.6	1.7	8.7	2.3	2.1	1	1	1	2	2	2	0	YwiC-like	protein
PsbN	PF02468.10	gi|332795938|ref|YP_004457438.1|	-	5	6.8	9.5	0.41	10.2	0.7	3.0	2	1	0	2	2	2	0	Photosystem	II	reaction	centre	N	protein	(psbN)
DUF3226	PF11536.3	gi|332795939|ref|YP_004457439.1|	-	0.24	10.8	1.8	1.2	8.4	0.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3226)
V_ATPase_I	PF01496.14	gi|332795940|ref|YP_004457440.1|	-	1.9e-49	168.2	24.8	1.9e-37	128.6	10.0	2.2	2	0	0	2	2	2	2	V-type	ATPase	116kDa	subunit	family
PaREP1	PF05942.6	gi|332795941|ref|YP_004457441.1|	-	6.7e-28	96.8	3.5	7.5e-28	96.6	2.4	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332795941|ref|YP_004457441.1|	-	0.0064	16.3	2.4	0.018	14.9	1.7	1.9	1	1	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|332795942|ref|YP_004457442.1|	-	5.5e-27	93.9	3.7	6.9e-27	93.6	2.6	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332795942|ref|YP_004457442.1|	-	0.00023	21.0	6.3	0.0032	17.3	4.4	2.1	1	1	0	1	1	1	1	HEPN	domain
TPR_11	PF13414.1	gi|332795942|ref|YP_004457442.1|	-	0.0063	16.1	1.0	0.014	15.0	0.7	1.6	1	0	0	1	1	1	1	TPR	repeat
DUF357	PF04010.8	gi|332795942|ref|YP_004457442.1|	-	0.0098	15.5	4.1	0.095	12.4	0.0	3.2	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF357)
DUF2312	PF10073.4	gi|332795942|ref|YP_004457442.1|	-	0.02	14.2	2.5	0.022	14.0	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
EF_TS	PF00889.14	gi|332795942|ref|YP_004457442.1|	-	0.2	10.9	1.5	0.43	9.8	0.1	1.8	1	1	1	2	2	2	0	Elongation	factor	TS
HARE-HTH	PF05066.8	gi|332795942|ref|YP_004457442.1|	-	0.55	10.6	0.1	0.55	10.6	0.1	2.2	3	0	0	3	3	3	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
Spore_GerAC	PF05504.6	gi|332795942|ref|YP_004457442.1|	-	2	8.1	8.2	3.1	7.5	0.8	2.1	1	1	1	2	2	2	0	Spore	germination	B3/	GerAC	like,	C-terminal
E1-E2_ATPase	PF00122.15	gi|332795944|ref|YP_004457444.1|	-	7.1e-49	165.9	2.7	1.8e-48	164.5	1.9	1.7	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|332795944|ref|YP_004457444.1|	-	1.4e-32	113.8	2.5	3.2e-32	112.6	0.8	2.3	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|332795944|ref|YP_004457444.1|	-	2.7e-18	65.8	9.9	2.1e-13	50.1	2.4	2.9	2	0	0	2	2	2	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|332795944|ref|YP_004457444.1|	-	3.5e-14	53.4	0.2	9.9e-14	51.9	0.0	1.9	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|332795944|ref|YP_004457444.1|	-	3.5e-06	26.8	6.7	0.0085	15.7	0.1	3.2	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|332795944|ref|YP_004457444.1|	-	0.045	13.6	0.1	0.47	10.3	0.0	2.8	3	0	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
YHS	PF04945.8	gi|332795945|ref|YP_004457445.1|	-	8.4e-20	70.3	2.6	1e-19	70.1	1.8	1.0	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.9	gi|332795945|ref|YP_004457445.1|	-	2.4e-05	23.8	1.1	3.4e-05	23.3	0.8	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|332795945|ref|YP_004457445.1|	-	7.5e-05	22.7	1.3	0.00011	22.3	0.9	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
ATPase-cat_bd	PF12156.3	gi|332795945|ref|YP_004457445.1|	-	0.05	14.1	0.2	0.057	13.9	0.1	1.1	1	0	0	1	1	1	0	Putative	metal-binding	domain	of	cation	transport	ATPase
RPAP2_Rtr1	PF04181.8	gi|332795945|ref|YP_004457445.1|	-	0.06	13.4	1.1	0.078	13.0	0.7	1.3	1	1	0	1	1	1	0	Rtr1/RPAP2	family
DUF2116	PF09889.4	gi|332795945|ref|YP_004457445.1|	-	0.072	12.8	0.1	0.3	10.9	0.1	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
NosL	PF05573.7	gi|332795945|ref|YP_004457445.1|	-	0.089	12.4	0.4	0.1	12.2	0.3	1.1	1	0	0	1	1	1	0	NosL
Arc_trans_TRASH	PF08394.5	gi|332795946|ref|YP_004457446.1|	-	4.4e-14	52.3	6.5	9.8e-14	51.2	4.5	1.6	1	0	0	1	1	1	1	Archaeal	TRASH	domain
HTH_24	PF13412.1	gi|332795946|ref|YP_004457446.1|	-	2.1e-11	43.0	0.1	3.8e-11	42.1	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|332795946|ref|YP_004457446.1|	-	1.3e-09	37.5	0.0	2.4e-09	36.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|332795946|ref|YP_004457446.1|	-	9.6e-09	34.7	0.0	1.7e-08	33.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|332795946|ref|YP_004457446.1|	-	4.2e-08	32.7	0.6	1e-07	31.4	0.0	1.8	2	0	0	2	2	2	1	HTH	domain
HTH_23	PF13384.1	gi|332795946|ref|YP_004457446.1|	-	4.9e-08	32.3	0.0	9e-08	31.5	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
TrmB	PF01978.14	gi|332795946|ref|YP_004457446.1|	-	3.3e-07	29.9	0.2	6.5e-07	28.9	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|332795946|ref|YP_004457446.1|	-	4.7e-07	29.2	0.0	7e-07	28.7	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|332795946|ref|YP_004457446.1|	-	4.9e-07	29.1	0.0	8.9e-07	28.3	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332795946|ref|YP_004457446.1|	-	4.9e-06	26.1	0.0	9.5e-06	25.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_28	PF13518.1	gi|332795946|ref|YP_004457446.1|	-	5.5e-06	26.2	0.0	1.1e-05	25.3	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|332795946|ref|YP_004457446.1|	-	7.2e-05	22.9	0.0	0.00011	22.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_20	PF12840.2	gi|332795946|ref|YP_004457446.1|	-	8.8e-05	22.2	0.0	0.00017	21.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|332795946|ref|YP_004457446.1|	-	0.00011	21.9	0.0	0.00021	21.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	resolvase
HTH_Tnp_ISL3	PF13542.1	gi|332795946|ref|YP_004457446.1|	-	0.00013	21.0	0.0	0.00019	20.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
Fe_dep_repress	PF01325.14	gi|332795946|ref|YP_004457446.1|	-	0.00019	21.2	0.1	0.00037	20.3	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|332795946|ref|YP_004457446.1|	-	0.00021	21.5	0.0	0.00035	20.8	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
GntR	PF00392.16	gi|332795946|ref|YP_004457446.1|	-	0.00033	20.0	0.0	0.00054	19.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Penicillinase_R	PF03965.11	gi|332795946|ref|YP_004457446.1|	-	0.0004	20.4	0.4	0.001	19.1	0.0	1.9	2	0	0	2	2	1	1	Penicillinase	repressor
HTH_38	PF13936.1	gi|332795946|ref|YP_004457446.1|	-	0.00042	19.8	0.0	0.00078	18.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|332795946|ref|YP_004457446.1|	-	0.00051	19.5	0.4	0.0028	17.1	0.0	2.0	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|332795946|ref|YP_004457446.1|	-	0.00062	19.0	0.2	0.0012	18.1	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_36	PF13730.1	gi|332795946|ref|YP_004457446.1|	-	0.00098	19.2	0.0	0.0024	17.9	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|332795946|ref|YP_004457446.1|	-	0.0011	18.8	0.0	0.0026	17.6	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|332795946|ref|YP_004457446.1|	-	0.0012	18.6	0.0	0.0024	17.6	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|332795946|ref|YP_004457446.1|	-	0.0014	18.3	0.4	0.0035	17.0	0.0	1.9	2	0	0	2	2	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Rrf2	PF02082.15	gi|332795946|ref|YP_004457446.1|	-	0.0015	18.5	0.0	0.0024	17.9	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
Mga	PF05043.8	gi|332795946|ref|YP_004457446.1|	-	0.002	18.3	0.3	0.0058	16.8	0.0	1.8	2	0	0	2	2	2	1	Mga	helix-turn-helix	domain
HTH_6	PF01418.12	gi|332795946|ref|YP_004457446.1|	-	0.0022	17.7	0.0	0.0044	16.7	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
TFIIE_alpha	PF02002.12	gi|332795946|ref|YP_004457446.1|	-	0.0024	17.3	0.8	0.0037	16.7	0.1	1.6	2	0	0	2	2	1	1	TFIIE	alpha	subunit
HTH_17	PF12728.2	gi|332795946|ref|YP_004457446.1|	-	0.0033	17.6	0.2	0.017	15.3	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
Crp	PF00325.15	gi|332795946|ref|YP_004457446.1|	-	0.0062	15.9	0.0	0.015	14.7	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	crp	family
LCD1	PF09798.4	gi|332795946|ref|YP_004457446.1|	-	0.0071	14.3	0.0	0.01	13.8	0.0	1.1	1	0	0	1	1	1	1	DNA	damage	checkpoint	protein
IF2_N	PF04760.10	gi|332795946|ref|YP_004457446.1|	-	0.0072	15.9	0.2	0.018	14.6	0.0	1.8	2	0	0	2	2	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
U3_snoRNA_assoc	PF08297.6	gi|332795946|ref|YP_004457446.1|	-	0.016	15.4	0.3	0.82	9.9	0.1	2.3	2	1	0	2	2	2	0	U3	snoRNA	associated
Trp_repressor	PF01371.14	gi|332795946|ref|YP_004457446.1|	-	0.017	15.0	0.1	0.036	13.9	0.0	1.5	1	0	0	1	1	1	0	Trp	repressor	protein
RPA_C	PF08784.6	gi|332795946|ref|YP_004457446.1|	-	0.018	15.4	0.0	0.031	14.6	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Phage_GP20	PF06810.6	gi|332795946|ref|YP_004457446.1|	-	0.019	14.4	0.1	0.026	13.9	0.0	1.3	1	0	0	1	1	1	0	Phage	minor	structural	protein	GP20
FeoC	PF09012.5	gi|332795946|ref|YP_004457446.1|	-	0.02	14.5	0.1	0.071	12.8	0.0	2.0	2	0	0	2	2	1	0	FeoC	like	transcriptional	regulator
GerE	PF00196.14	gi|332795946|ref|YP_004457446.1|	-	0.024	13.9	0.0	0.06	12.6	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
zf-FCS	PF06467.9	gi|332795946|ref|YP_004457446.1|	-	0.033	13.8	0.6	0.074	12.7	0.4	1.5	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
Sigma70_r4_2	PF08281.7	gi|332795946|ref|YP_004457446.1|	-	0.036	13.5	0.0	0.14	11.6	0.0	2.0	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_22	PF13309.1	gi|332795946|ref|YP_004457446.1|	-	0.042	13.6	0.1	0.39	10.4	0.0	2.3	1	1	1	2	2	2	0	HTH	domain
HTH_3	PF01381.17	gi|332795946|ref|YP_004457446.1|	-	0.044	13.6	0.1	0.078	12.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix
LacI	PF00356.16	gi|332795946|ref|YP_004457446.1|	-	0.055	13.0	0.0	0.13	11.9	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	lacI	family
DUF977	PF06163.6	gi|332795946|ref|YP_004457446.1|	-	0.072	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_Tnp_4	PF13613.1	gi|332795946|ref|YP_004457446.1|	-	0.15	11.6	0.0	0.26	10.8	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
Zn_ribbon_recom	PF13408.1	gi|332795946|ref|YP_004457446.1|	-	0.22	11.8	5.9	0.48	10.7	4.1	1.5	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
HTH_1	PF00126.22	gi|332795946|ref|YP_004457446.1|	-	0.24	11.1	0.7	0.43	10.3	0.0	1.7	2	0	0	2	2	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
NTP_transf_2	PF01909.18	gi|332795947|ref|YP_004457447.1|	-	1e-08	35.3	1.1	1.5e-08	34.8	0.8	1.3	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF2999	PF11212.3	gi|332795947|ref|YP_004457447.1|	-	0.14	12.2	0.1	0.25	11.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2999)
HEPN	PF05168.9	gi|332795948|ref|YP_004457448.1|	-	2.9e-14	52.9	1.9	3.3e-14	52.7	1.3	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF3080	PF11279.3	gi|332795948|ref|YP_004457448.1|	-	0.046	12.8	0.4	0.055	12.6	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3080)
DHDPS	PF00701.17	gi|332795949|ref|YP_004457449.1|	-	5.9e-43	146.5	0.0	6.7e-43	146.3	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
MR_MLE_C	PF13378.1	gi|332795950|ref|YP_004457450.1|	-	2.3e-23	82.2	0.0	5.2e-23	81.1	0.0	1.6	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|332795950|ref|YP_004457450.1|	-	4.5e-15	55.9	0.0	3.9e-14	52.9	0.0	2.3	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|332795950|ref|YP_004457450.1|	-	1.5e-14	53.9	0.0	4.3e-14	52.5	0.0	1.7	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
NTPase_1	PF03266.10	gi|332795951|ref|YP_004457451.1|	-	8.9e-49	165.4	1.5	1.1e-48	165.1	1.0	1.0	1	0	0	1	1	1	1	NTPase
AAA_17	PF13207.1	gi|332795951|ref|YP_004457451.1|	-	7.2e-06	26.8	0.0	1e-05	26.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|332795951|ref|YP_004457451.1|	-	8.6e-06	25.9	0.1	1.6e-05	25.1	0.0	1.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|332795951|ref|YP_004457451.1|	-	3.7e-05	23.5	0.2	8.1e-05	22.4	0.2	1.6	1	1	0	1	1	1	1	Archaeal	ATPase
MobB	PF03205.9	gi|332795951|ref|YP_004457451.1|	-	4.4e-05	23.2	1.4	0.00021	21.0	0.1	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.1	gi|332795951|ref|YP_004457451.1|	-	5.9e-05	23.2	0.1	0.00019	21.5	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332795951|ref|YP_004457451.1|	-	6.7e-05	23.1	0.1	9.3e-05	22.7	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|332795951|ref|YP_004457451.1|	-	8.3e-05	22.4	0.8	0.0028	17.5	0.6	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|332795951|ref|YP_004457451.1|	-	0.0007	19.3	0.5	0.01	15.5	0.0	2.3	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Miro	PF08477.8	gi|332795951|ref|YP_004457451.1|	-	0.00094	19.6	1.0	0.0074	16.7	0.2	2.2	2	1	0	2	2	2	1	Miro-like	protein
CbiA	PF01656.18	gi|332795951|ref|YP_004457451.1|	-	0.00096	18.6	0.4	0.024	14.0	0.0	2.1	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_10	PF12846.2	gi|332795951|ref|YP_004457451.1|	-	0.00097	18.6	0.1	0.0021	17.5	0.0	1.5	2	0	0	2	2	2	1	AAA-like	domain
DUF2075	PF09848.4	gi|332795951|ref|YP_004457451.1|	-	0.0017	17.4	0.3	0.0024	16.9	0.2	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_16	PF13191.1	gi|332795951|ref|YP_004457451.1|	-	0.0027	17.7	0.0	0.0037	17.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
Pox_A32	PF04665.7	gi|332795951|ref|YP_004457451.1|	-	0.0029	16.9	0.1	0.55	9.4	0.0	2.0	2	0	0	2	2	2	1	Poxvirus	A32	protein
cobW	PF02492.14	gi|332795951|ref|YP_004457451.1|	-	0.0033	16.8	0.1	0.0053	16.2	0.1	1.5	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_19	PF13245.1	gi|332795951|ref|YP_004457451.1|	-	0.0033	17.1	0.1	0.0055	16.4	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
ArgK	PF03308.11	gi|332795951|ref|YP_004457451.1|	-	0.0035	16.1	0.1	0.0059	15.4	0.1	1.4	1	0	0	1	1	1	1	ArgK	protein
NB-ARC	PF00931.17	gi|332795951|ref|YP_004457451.1|	-	0.004	16.0	0.1	0.0045	15.8	0.1	1.3	1	0	0	1	1	1	1	NB-ARC	domain
NACHT	PF05729.7	gi|332795951|ref|YP_004457451.1|	-	0.0049	16.5	0.0	0.0099	15.5	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
IstB_IS21	PF01695.12	gi|332795951|ref|YP_004457451.1|	-	0.0051	16.2	0.0	0.37	10.1	0.0	2.2	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
DnaB_C	PF03796.10	gi|332795951|ref|YP_004457451.1|	-	0.012	14.4	0.0	0.012	14.4	0.0	1.2	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
RNA_helicase	PF00910.17	gi|332795951|ref|YP_004457451.1|	-	0.013	15.6	0.1	0.038	14.1	0.1	2.0	1	1	0	1	1	1	0	RNA	helicase
APS_kinase	PF01583.15	gi|332795951|ref|YP_004457451.1|	-	0.013	15.1	0.0	0.025	14.2	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_28	PF13521.1	gi|332795951|ref|YP_004457451.1|	-	0.025	14.5	0.0	0.035	14.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|332795951|ref|YP_004457451.1|	-	0.026	14.0	0.0	0.027	14.0	0.0	1.2	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|332795951|ref|YP_004457451.1|	-	0.027	14.0	1.6	0.066	12.7	0.2	2.1	2	1	1	3	3	3	0	AAA	domain
AAA_30	PF13604.1	gi|332795951|ref|YP_004457451.1|	-	0.03	13.8	0.2	0.074	12.6	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|332795951|ref|YP_004457451.1|	-	0.043	14.1	0.3	0.075	13.3	0.2	1.6	1	1	0	1	1	1	0	ABC	transporter
FtsK_SpoIIIE	PF01580.13	gi|332795951|ref|YP_004457451.1|	-	0.046	13.2	0.0	0.11	11.9	0.0	1.6	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
ArsA_ATPase	PF02374.10	gi|332795951|ref|YP_004457451.1|	-	0.057	12.4	0.5	0.12	11.3	0.1	1.7	2	1	0	2	2	2	0	Anion-transporting	ATPase
DUF2478	PF10649.4	gi|332795951|ref|YP_004457451.1|	-	0.059	12.6	0.0	0.1	11.9	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2478)
KTI12	PF08433.5	gi|332795951|ref|YP_004457451.1|	-	0.07	12.3	0.1	0.28	10.3	0.0	1.9	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
RuvB_N	PF05496.7	gi|332795951|ref|YP_004457451.1|	-	0.084	11.9	0.1	0.31	10.0	0.0	1.8	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
ATP-synt_ab	PF00006.20	gi|332795951|ref|YP_004457451.1|	-	0.12	11.8	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Ras	PF00071.17	gi|332795951|ref|YP_004457451.1|	-	0.14	11.5	0.1	0.31	10.4	0.0	1.6	2	0	0	2	2	2	0	Ras	family
AAA_25	PF13481.1	gi|332795951|ref|YP_004457451.1|	-	0.14	11.5	0.1	0.23	10.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Antitoxin-MazE	PF04014.13	gi|332795953|ref|YP_004457453.1|	-	9.5e-14	50.7	2.9	1.2e-13	50.3	1.7	1.5	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
AbrB-like	PF14250.1	gi|332795953|ref|YP_004457453.1|	-	0.089	12.7	0.1	0.19	11.6	0.0	1.6	2	0	0	2	2	2	0	AbrB-like	transcriptional	regulator
DUF2118	PF09891.4	gi|332795953|ref|YP_004457453.1|	-	0.094	12.4	0.7	0.13	11.9	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
PIN	PF01850.16	gi|332795954|ref|YP_004457454.1|	-	9.1e-17	61.5	0.1	1e-16	61.3	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|332795954|ref|YP_004457454.1|	-	0.023	14.4	0.0	0.023	14.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
Glyco_hydro_15	PF00723.16	gi|332795955|ref|YP_004457455.1|	-	1.4e-53	182.0	0.0	3.2e-49	167.6	0.0	2.1	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|332795955|ref|YP_004457455.1|	-	0.0032	16.2	0.3	0.006	15.3	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
TPR_4	PF07721.9	gi|332795955|ref|YP_004457455.1|	-	0.004	17.4	0.0	0.027	14.8	0.0	2.2	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|332795955|ref|YP_004457455.1|	-	0.022	15.0	0.0	0.052	13.8	0.0	1.5	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TDH	PF03347.8	gi|332795955|ref|YP_004457455.1|	-	0.041	13.4	0.1	0.16	11.5	0.0	1.9	2	0	0	2	2	2	0	Vibrio	thermostable	direct	hemolysin
PCMT	PF01135.14	gi|332795956|ref|YP_004457456.1|	-	1.8e-37	128.9	0.0	2e-37	128.7	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.15	gi|332795956|ref|YP_004457456.1|	-	6.1e-10	38.5	0.1	1e-09	37.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_18	PF12847.2	gi|332795956|ref|YP_004457456.1|	-	8.4e-08	32.7	0.0	1.3e-07	32.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332795956|ref|YP_004457456.1|	-	4.6e-06	26.3	0.0	6.3e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|332795956|ref|YP_004457456.1|	-	6.1e-05	22.6	0.0	0.0001	21.9	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
CMAS	PF02353.15	gi|332795956|ref|YP_004457456.1|	-	0.00014	21.0	0.1	0.00022	20.3	0.0	1.3	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_23	PF13489.1	gi|332795956|ref|YP_004457456.1|	-	0.00015	21.5	0.0	0.00023	20.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|332795956|ref|YP_004457456.1|	-	0.00057	19.9	0.0	0.00089	19.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332795956|ref|YP_004457456.1|	-	0.00062	20.0	0.0	0.0011	19.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|332795956|ref|YP_004457456.1|	-	0.0007	20.0	0.0	0.0014	19.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332795956|ref|YP_004457456.1|	-	0.0039	16.5	0.0	0.0067	15.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
DOT1	PF08123.8	gi|332795956|ref|YP_004457456.1|	-	0.022	14.0	0.0	0.035	13.4	0.0	1.2	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Fibrillarin	PF01269.12	gi|332795956|ref|YP_004457456.1|	-	0.028	13.3	0.0	0.041	12.7	0.0	1.2	1	0	0	1	1	1	0	Fibrillarin
Ubie_methyltran	PF01209.13	gi|332795956|ref|YP_004457456.1|	-	0.042	12.9	0.0	0.066	12.3	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_3	PF01596.12	gi|332795956|ref|YP_004457456.1|	-	0.073	12.1	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
DUF86	PF01934.12	gi|332795957|ref|YP_004457457.1|	-	1.1e-15	57.3	0.5	1.2e-15	57.1	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF86
CtsR	PF05848.6	gi|332795957|ref|YP_004457457.1|	-	0.05	13.5	0.1	0.098	12.6	0.1	1.5	1	1	0	1	1	1	0	Firmicute	transcriptional	repressor	of	class	III	stress	genes	(CtsR)
RcsC	PF09456.5	gi|332795957|ref|YP_004457457.1|	-	0.077	12.6	0.1	0.16	11.6	0.0	1.6	1	1	0	1	1	1	0	RcsC	Alpha-Beta-Loop	(ABL)
NTP_transf_2	PF01909.18	gi|332795958|ref|YP_004457458.1|	-	1.3e-06	28.5	0.9	1.9e-06	28.1	0.5	1.3	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
MFS_1	PF07690.11	gi|332795959|ref|YP_004457459.1|	-	6.4e-52	176.4	49.1	6.4e-52	176.4	34.0	1.9	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332795959|ref|YP_004457459.1|	-	1.1e-06	27.5	15.4	1.1e-06	27.5	10.7	2.7	2	2	1	3	3	3	3	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|332795959|ref|YP_004457459.1|	-	1.6e-05	23.2	18.6	0.00014	20.1	7.8	2.4	2	0	0	2	2	2	2	Transmembrane	secretion	effector
S1FA	PF04689.8	gi|332795959|ref|YP_004457459.1|	-	7.7	6.4	6.3	5.8	6.8	0.7	3.3	2	0	0	2	2	2	0	DNA	binding	protein	S1FA
Methyltransf_11	PF08241.7	gi|332795960|ref|YP_004457460.1|	-	1.4e-18	67.1	0.0	1.9e-18	66.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332795960|ref|YP_004457460.1|	-	2.5e-17	62.8	0.0	3.1e-17	62.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332795960|ref|YP_004457460.1|	-	5e-11	42.8	0.0	9e-11	42.0	0.0	1.4	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332795960|ref|YP_004457460.1|	-	6.1e-11	42.6	0.0	8.3e-11	42.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332795960|ref|YP_004457460.1|	-	3.8e-10	40.3	0.0	5.7e-10	39.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|332795960|ref|YP_004457460.1|	-	4.1e-10	39.6	0.0	4.8e-10	39.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|332795960|ref|YP_004457460.1|	-	3e-07	30.4	0.0	4.1e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332795960|ref|YP_004457460.1|	-	1.9e-06	27.3	0.0	2.7e-06	26.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|332795960|ref|YP_004457460.1|	-	1.3e-05	24.4	0.0	1.6e-05	24.1	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_32	PF13679.1	gi|332795960|ref|YP_004457460.1|	-	0.00097	18.8	0.0	0.0012	18.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.1	gi|332795960|ref|YP_004457460.1|	-	0.0053	17.5	0.0	0.0076	17.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CheR	PF01739.13	gi|332795960|ref|YP_004457460.1|	-	0.0058	15.9	0.0	0.0078	15.5	0.0	1.1	1	0	0	1	1	1	1	CheR	methyltransferase,	SAM	binding	domain
RrnaAD	PF00398.15	gi|332795960|ref|YP_004457460.1|	-	0.01	14.8	0.0	0.013	14.5	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
MetW	PF07021.7	gi|332795960|ref|YP_004457460.1|	-	0.013	14.9	0.0	0.016	14.6	0.0	1.1	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
TehB	PF03848.9	gi|332795960|ref|YP_004457460.1|	-	0.014	14.6	0.1	0.017	14.3	0.0	1.4	1	1	0	1	1	1	0	Tellurite	resistance	protein	TehB
FtsJ	PF01728.14	gi|332795960|ref|YP_004457460.1|	-	0.02	14.8	0.0	0.04	13.9	0.0	1.7	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
AA_permease_2	PF13520.1	gi|332795961|ref|YP_004457461.1|	-	4.6e-41	140.7	44.6	9.5e-41	139.7	30.9	1.5	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332795961|ref|YP_004457461.1|	-	1.6e-40	138.8	41.9	2.7e-40	138.1	29.0	1.3	1	0	0	1	1	1	1	Amino	acid	permease
Spore_permease	PF03845.8	gi|332795961|ref|YP_004457461.1|	-	1.8e-11	43.2	23.7	1.8e-11	43.2	16.4	1.6	1	1	0	1	1	1	1	Spore	germination	protein
DUF3951	PF13131.1	gi|332795961|ref|YP_004457461.1|	-	0.016	14.9	0.5	0.016	14.9	0.3	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3951)
AA_permease_C	PF13906.1	gi|332795961|ref|YP_004457461.1|	-	0.017	15.0	0.2	0.017	15.0	0.1	4.4	5	1	1	6	6	6	0	C-terminus	of	AA_permease
NTP_transf_2	PF01909.18	gi|332795962|ref|YP_004457462.1|	-	4.3e-09	36.5	0.1	5.5e-09	36.2	0.1	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Aldedh	PF00171.17	gi|332795964|ref|YP_004457464.1|	-	2e-163	544.0	0.0	2.2e-163	543.8	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|332795964|ref|YP_004457464.1|	-	0.0082	14.9	0.0	0.016	13.9	0.0	1.6	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
AA_permease_2	PF13520.1	gi|332795965|ref|YP_004457465.1|	-	1.1e-35	123.0	54.6	1.4e-35	122.6	37.5	1.3	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332795965|ref|YP_004457465.1|	-	1.1e-10	40.4	49.7	2.4e-10	39.3	34.5	1.5	1	1	0	1	1	1	1	Amino	acid	permease
Polyketide_cyc2	PF10604.4	gi|332795966|ref|YP_004457466.1|	-	2.1e-05	24.7	0.0	2.2e-05	24.6	0.0	1.1	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Polyketide_cyc	PF03364.15	gi|332795966|ref|YP_004457466.1|	-	0.013	15.4	0.0	0.018	15.0	0.0	1.4	1	1	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
HTH_11	PF08279.7	gi|332795966|ref|YP_004457466.1|	-	0.072	12.7	0.0	0.31	10.6	0.0	1.9	2	0	0	2	2	2	0	HTH	domain
DUF237	PF03072.9	gi|332795966|ref|YP_004457466.1|	-	0.074	12.9	0.3	0.39	10.6	0.0	1.9	2	0	0	2	2	2	0	MG032/MG096/MG288	family	1
CBM_2	PF00553.14	gi|332795966|ref|YP_004457466.1|	-	0.078	13.0	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	Cellulose	binding	domain
RNA_POL_M_15KD	PF02150.11	gi|332795967|ref|YP_004457467.1|	-	1.9e-12	46.6	11.1	5.4e-07	29.1	2.9	2.2	2	0	0	2	2	2	2	RNA	polymerases	M/15	Kd	subunit
DZR	PF12773.2	gi|332795967|ref|YP_004457467.1|	-	8.8e-09	35.0	5.6	2e-05	24.2	0.7	2.2	2	0	0	2	2	2	2	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|332795967|ref|YP_004457467.1|	-	1.9e-06	27.3	11.1	0.00064	19.3	1.1	2.6	2	1	1	3	3	3	3	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|332795967|ref|YP_004457467.1|	-	2e-06	27.4	13.3	0.00028	20.6	0.5	3.1	2	1	1	3	3	3	2	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332795967|ref|YP_004457467.1|	-	4.2e-06	25.7	17.5	0.00068	18.7	5.3	3.6	3	1	1	4	4	4	3	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|332795967|ref|YP_004457467.1|	-	8e-06	25.2	12.3	4.9e-05	22.7	2.0	3.0	2	2	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
IBR	PF01485.16	gi|332795967|ref|YP_004457467.1|	-	2.7e-05	23.9	6.9	0.0096	15.7	0.1	2.2	2	0	0	2	2	2	2	IBR	domain
zinc-ribbons_6	PF07191.7	gi|332795967|ref|YP_004457467.1|	-	3e-05	23.7	4.1	0.023	14.4	0.4	2.1	2	0	0	2	2	2	2	zinc-ribbons
Nudix_N_2	PF14803.1	gi|332795967|ref|YP_004457467.1|	-	0.00038	20.0	15.5	0.13	11.9	1.1	4.0	2	2	0	2	2	2	1	Nudix	N-terminal
zinc_ribbon_2	PF13240.1	gi|332795967|ref|YP_004457467.1|	-	0.00046	19.5	19.2	0.0016	17.8	4.6	3.4	2	2	0	2	2	2	1	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|332795967|ref|YP_004457467.1|	-	0.0008	18.8	11.7	0.0025	17.2	1.7	2.6	2	1	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2318	PF10080.4	gi|332795967|ref|YP_004457467.1|	-	0.00099	18.8	6.9	0.01	15.5	0.4	2.1	1	1	1	2	2	2	1	Predicted	membrane	protein	(DUF2318)
Prok-RING_1	PF14446.1	gi|332795967|ref|YP_004457467.1|	-	0.0026	17.4	0.8	0.0026	17.4	0.6	3.0	2	1	0	3	3	3	1	Prokaryotic	RING	finger	family	1
TF_Zn_Ribbon	PF08271.7	gi|332795967|ref|YP_004457467.1|	-	0.0026	17.0	13.5	0.005	16.1	3.1	3.3	3	1	0	3	3	3	1	TFIIB	zinc-binding
HypA	PF01155.14	gi|332795967|ref|YP_004457467.1|	-	0.0033	17.1	7.2	0.027	14.1	0.7	2.4	1	1	1	2	2	2	1	Hydrogenase	expression/synthesis	hypA	family
zf-FPG_IleRS	PF06827.9	gi|332795967|ref|YP_004457467.1|	-	0.0047	16.5	10.6	0.36	10.5	1.4	3.2	3	0	0	3	3	3	2	Zinc	finger	found	in	FPG	and	IleRS
zf-C4_Topoisom	PF01396.14	gi|332795967|ref|YP_004457467.1|	-	0.0048	16.3	15.3	0.21	11.1	2.2	3.5	3	1	0	3	3	3	1	Topoisomerase	DNA	binding	C4	zinc	finger
UPF0547	PF10571.4	gi|332795967|ref|YP_004457467.1|	-	0.0051	16.4	18.0	1.5	8.5	0.1	4.0	3	1	1	4	4	4	1	Uncharacterised	protein	family	UPF0547
FYVE	PF01363.16	gi|332795967|ref|YP_004457467.1|	-	0.019	14.8	7.9	0.024	14.5	0.4	2.4	2	1	0	2	2	2	0	FYVE	zinc	finger
PADR1	PF08063.7	gi|332795967|ref|YP_004457467.1|	-	0.019	14.3	0.4	0.019	14.3	0.3	2.8	2	1	0	2	2	2	0	PADR1	(NUC008)	domain
DNA_ligase_ZBD	PF03119.11	gi|332795967|ref|YP_004457467.1|	-	0.025	14.2	9.3	1	9.1	0.1	3.5	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Zn-ribbon_8	PF09723.5	gi|332795967|ref|YP_004457467.1|	-	0.026	14.4	16.7	6.1	6.8	0.9	4.2	3	1	0	3	3	3	0	Zinc	ribbon	domain
DUF1936	PF09151.5	gi|332795967|ref|YP_004457467.1|	-	0.026	14.0	12.5	3.8	7.1	0.0	3.6	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF1936)
Ribosomal_L37e	PF01907.14	gi|332795967|ref|YP_004457467.1|	-	0.044	13.5	8.1	0.35	10.6	0.7	2.5	2	0	0	2	2	2	0	Ribosomal	protein	L37e
PhnA_Zn_Ribbon	PF08274.7	gi|332795967|ref|YP_004457467.1|	-	0.045	13.5	3.0	0.045	13.5	2.1	3.4	3	1	0	3	3	2	0	PhnA	Zinc-Ribbon
A2L_zn_ribbon	PF08792.5	gi|332795967|ref|YP_004457467.1|	-	0.048	13.1	12.0	1.1	8.8	0.1	3.4	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
Cys_rich_CPCC	PF14206.1	gi|332795967|ref|YP_004457467.1|	-	0.056	13.0	0.2	0.056	13.0	0.2	2.6	2	1	0	2	2	2	0	Cysteine-rich	CPCC
Auto_anti-p27	PF06677.7	gi|332795967|ref|YP_004457467.1|	-	0.065	12.9	5.9	0.065	12.9	4.1	2.9	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
tRNA-synt_1g	PF09334.6	gi|332795967|ref|YP_004457467.1|	-	0.15	10.7	0.1	0.17	10.4	0.1	1.2	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(M)
PHF5	PF03660.9	gi|332795967|ref|YP_004457467.1|	-	0.15	12.0	4.8	1.1	9.3	3.3	2.0	1	1	0	1	1	1	0	PHF5-like	protein
zinc_ribbon_4	PF13717.1	gi|332795967|ref|YP_004457467.1|	-	0.18	11.5	15.7	1.1	8.9	0.1	4.2	2	2	2	4	4	4	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332795967|ref|YP_004457467.1|	-	0.18	11.4	14.0	15	5.2	0.2	4.2	4	0	0	4	4	4	0	Transcription	factor	S-II	(TFIIS)
zf-ZPR1	PF03367.8	gi|332795967|ref|YP_004457467.1|	-	0.18	10.9	0.1	0.18	10.9	0.0	2.7	3	1	0	3	3	2	0	ZPR1	zinc-finger	domain
zf-ISL3	PF14690.1	gi|332795967|ref|YP_004457467.1|	-	0.21	11.6	21.6	1.8	8.6	0.5	4.2	2	2	2	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_5	PF13719.1	gi|332795967|ref|YP_004457467.1|	-	0.27	10.8	15.9	5.9	6.5	2.0	4.1	2	2	1	3	3	3	0	zinc-ribbon	domain
C1_1	PF00130.17	gi|332795967|ref|YP_004457467.1|	-	0.3	10.8	9.0	0.72	9.6	0.5	2.2	2	0	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-RING_3	PF14369.1	gi|332795967|ref|YP_004457467.1|	-	0.3	11.0	12.6	1.1	9.2	0.0	3.5	3	1	1	4	4	3	0	zinc-finger
Zn_Tnp_IS91	PF14319.1	gi|332795967|ref|YP_004457467.1|	-	0.36	10.3	7.9	1.4	8.4	0.1	3.0	1	1	1	2	2	2	0	Transposase	zinc-binding	domain
NMD3	PF04981.8	gi|332795967|ref|YP_004457467.1|	-	0.49	9.4	7.3	0.44	9.6	1.0	2.2	1	1	1	2	2	2	0	NMD3	family
Ribosomal_L32p	PF01783.18	gi|332795967|ref|YP_004457467.1|	-	0.6	10.3	7.5	0.51	10.5	0.5	2.9	2	1	0	2	2	2	0	Ribosomal	L32p	protein	family
zf-RING_5	PF14634.1	gi|332795967|ref|YP_004457467.1|	-	0.7	9.6	9.8	0.95	9.2	1.3	2.3	2	0	0	2	2	2	0	zinc-RING	finger	domain
zf-AN1	PF01428.11	gi|332795967|ref|YP_004457467.1|	-	0.79	9.6	9.3	2.5	8.0	0.9	2.9	2	2	1	3	3	3	0	AN1-like	Zinc	finger
Elf1	PF05129.8	gi|332795967|ref|YP_004457467.1|	-	0.85	9.3	6.6	0.66	9.7	0.3	2.7	2	1	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|332795967|ref|YP_004457467.1|	-	0.9	9.8	12.9	1	9.7	3.4	3.2	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
RecR	PF02132.10	gi|332795967|ref|YP_004457467.1|	-	1.1	8.7	9.1	5.6	6.4	0.4	3.5	3	1	0	3	3	3	0	RecR	protein
DUF1610	PF07754.6	gi|332795967|ref|YP_004457467.1|	-	1.2	9.2	24.1	0.48	10.5	1.1	4.2	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
zf-HIT	PF04438.11	gi|332795967|ref|YP_004457467.1|	-	1.3	8.7	16.9	0.89	9.2	0.6	4.0	4	0	0	4	4	4	0	HIT	zinc	finger
zf-tcix	PF14952.1	gi|332795967|ref|YP_004457467.1|	-	1.4	8.2	16.3	1.6	8.1	0.4	4.0	4	0	0	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-TFIIB	PF13453.1	gi|332795967|ref|YP_004457467.1|	-	1.5	8.0	14.1	7.3	5.8	2.8	3.4	1	1	2	3	3	3	0	Transcription	factor	zinc-finger
DUF35_N	PF12172.3	gi|332795967|ref|YP_004457467.1|	-	1.5	8.8	11.0	42	4.2	0.1	4.0	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C4pol	PF14260.1	gi|332795967|ref|YP_004457467.1|	-	1.6	8.7	4.6	16	5.5	3.2	2.2	1	1	0	1	1	1	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zf-C3HC4_4	PF15227.1	gi|332795967|ref|YP_004457467.1|	-	1.6	8.6	7.6	7.3	6.5	1.3	2.6	2	0	0	2	2	2	0	zinc	finger	of	C3HC4-type,	RING
NOB1_Zn_bind	PF08772.6	gi|332795967|ref|YP_004457467.1|	-	1.9	8.3	17.5	1.8	8.4	0.1	3.8	2	2	2	4	4	4	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-Mss51	PF13824.1	gi|332795967|ref|YP_004457467.1|	-	2.1	8.2	11.5	3.9	7.4	1.8	2.7	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Fer4_9	PF13187.1	gi|332795967|ref|YP_004457467.1|	-	2.1	8.6	6.4	8.7	6.6	4.4	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Cys_rich_KTR	PF14205.1	gi|332795967|ref|YP_004457467.1|	-	2.2	7.8	12.3	5.2	6.5	1.0	3.3	3	0	0	3	3	3	0	Cysteine-rich	KTR
DnaJ_CXXCXGXG	PF00684.14	gi|332795967|ref|YP_004457467.1|	-	2.2	8.3	8.6	7.6	6.6	1.1	2.3	2	0	0	2	2	2	0	DnaJ	central	domain
zf-IS66	PF13005.2	gi|332795967|ref|YP_004457467.1|	-	2.3	8.2	19.0	4.3	7.3	0.1	4.1	2	2	2	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
Ogr_Delta	PF04606.7	gi|332795967|ref|YP_004457467.1|	-	2.5	7.8	13.4	7.2	6.3	0.1	3.8	4	0	0	4	4	4	0	Ogr/Delta-like	zinc	finger
FYVE_2	PF02318.11	gi|332795967|ref|YP_004457467.1|	-	2.7	7.9	5.1	17	5.3	0.2	2.2	1	1	0	2	2	2	0	FYVE-type	zinc	finger
GFA	PF04828.9	gi|332795967|ref|YP_004457467.1|	-	2.9	7.8	11.4	10	6.1	0.0	3.7	1	1	3	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-CHY	PF05495.7	gi|332795967|ref|YP_004457467.1|	-	3.6	7.8	8.0	3.3	7.9	0.3	2.6	1	1	2	3	3	3	0	CHY	zinc	finger
zf-C3HC4_3	PF13920.1	gi|332795967|ref|YP_004457467.1|	-	3.7	7.2	11.0	0.27	10.9	0.9	2.5	2	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
RPA_interact_C	PF14768.1	gi|332795967|ref|YP_004457467.1|	-	4	7.9	5.3	15	6.0	0.5	2.2	2	0	0	2	2	2	0	Replication	protein	A	interacting	C-terminal
DUF329	PF03884.9	gi|332795967|ref|YP_004457467.1|	-	8	6.0	11.1	9.4	5.8	0.5	3.1	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF329)
PolC_DP2	PF03833.8	gi|332795967|ref|YP_004457467.1|	-	9.1	3.7	6.3	2.6	5.6	0.7	1.9	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
Rubredoxin	PF00301.15	gi|332795967|ref|YP_004457467.1|	-	9.8	6.1	21.6	1.1	9.1	0.7	4.1	3	1	0	4	4	4	0	Rubredoxin
DUF302	PF03625.9	gi|332795968|ref|YP_004457468.1|	-	4.5e-18	64.5	0.0	6.4e-18	64.0	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF302
MxiM	PF11441.3	gi|332795968|ref|YP_004457468.1|	-	0.021	14.8	0.2	0.031	14.3	0.1	1.3	1	0	0	1	1	1	0	Pilot	protein	MxiM
DUF1894	PF08979.6	gi|332795968|ref|YP_004457468.1|	-	0.029	14.4	0.3	0.063	13.3	0.2	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1894)
PaREP1	PF05942.6	gi|332795969|ref|YP_004457469.1|	-	1.5e-22	79.6	0.5	1.8e-22	79.3	0.3	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332795969|ref|YP_004457469.1|	-	0.0059	16.4	0.3	0.007	16.2	0.2	1.3	1	1	0	1	1	1	1	HEPN	domain
GED	PF02212.13	gi|332795969|ref|YP_004457469.1|	-	0.11	12.3	0.5	0.18	11.7	0.4	1.3	1	0	0	1	1	1	0	Dynamin	GTPase	effector	domain
YfdX	PF10938.3	gi|332795969|ref|YP_004457469.1|	-	0.12	12.0	0.3	0.17	11.5	0.2	1.2	1	0	0	1	1	1	0	YfdX	protein
PaREP1	PF05942.6	gi|332795970|ref|YP_004457470.1|	-	1.3e-21	76.6	0.4	1.5e-21	76.4	0.3	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332795970|ref|YP_004457470.1|	-	0.031	14.1	0.1	0.06	13.2	0.1	1.5	1	0	0	1	1	1	0	HEPN	domain
DUF4398	PF14346.1	gi|332795970|ref|YP_004457470.1|	-	0.095	12.7	0.1	0.13	12.3	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
AA_permease_2	PF13520.1	gi|332795971|ref|YP_004457471.1|	-	1e-11	44.0	66.7	1.9e-11	43.1	46.1	1.5	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332795971|ref|YP_004457471.1|	-	0.00014	20.3	56.1	0.00027	19.4	38.9	1.4	1	1	0	1	1	1	1	Amino	acid	permease
zf-C2H2	PF00096.21	gi|332795973|ref|YP_004457473.1|	-	0.00036	20.6	0.6	0.00064	19.9	0.4	1.4	1	0	0	1	1	1	1	Zinc	finger,	C2H2	type
zf-C2H2_4	PF13894.1	gi|332795973|ref|YP_004457473.1|	-	0.0022	18.2	0.2	0.0042	17.3	0.2	1.5	1	0	0	1	1	1	1	C2H2-type	zinc	finger
Rad50_zn_hook	PF04423.9	gi|332795973|ref|YP_004457473.1|	-	0.0084	15.5	0.2	0.019	14.4	0.1	1.7	1	1	0	1	1	1	1	Rad50	zinc	hook	motif
zf-C2H2_jaz	PF12171.3	gi|332795973|ref|YP_004457473.1|	-	0.012	15.7	0.1	0.023	14.8	0.1	1.4	1	0	0	1	1	1	0	Zinc-finger	double-stranded	RNA-binding
zf-C2H2_2	PF12756.2	gi|332795973|ref|YP_004457473.1|	-	0.049	13.7	0.0	0.075	13.1	0.0	1.4	1	0	0	1	1	1	0	C2H2	type	zinc-finger	(2	copies)
zf-C2H2_6	PF13912.1	gi|332795973|ref|YP_004457473.1|	-	0.075	12.9	0.1	0.16	11.9	0.1	1.5	1	0	0	1	1	1	0	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|332795973|ref|YP_004457473.1|	-	0.092	12.8	0.0	0.16	12.1	0.0	1.3	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
Glyco_hydro_1	PF00232.13	gi|332795974|ref|YP_004457474.1|	-	2.8e-47	160.9	0.7	7.4e-25	87.0	0.0	2.2	1	1	1	2	2	2	2	Glycosyl	hydrolase	family	1
Cellulase	PF00150.13	gi|332795974|ref|YP_004457474.1|	-	7.9e-06	25.2	0.0	0.00035	19.8	0.0	2.2	2	0	0	2	2	2	2	Cellulase	(glycosyl	hydrolase	family	5)
SBP_bac_8	PF13416.1	gi|332795976|ref|YP_004457476.1|	-	5.9e-18	65.6	3.2	5.9e-18	65.6	2.2	1.5	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|332795976|ref|YP_004457476.1|	-	2.9e-12	46.9	2.7	4.9e-12	46.2	1.9	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
BPD_transp_1	PF00528.17	gi|332795977|ref|YP_004457477.1|	-	2.5e-14	53.2	18.9	2.5e-14	53.2	13.1	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|332795978|ref|YP_004457478.1|	-	3.1e-14	52.9	23.0	4.8e-14	52.3	15.9	1.3	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|332795979|ref|YP_004457479.1|	-	4.9e-28	98.1	0.0	8.8e-28	97.3	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332795979|ref|YP_004457479.1|	-	3.1e-10	40.5	0.3	9.5e-06	25.7	0.0	2.6	2	1	1	3	3	3	2	AAA	domain
TOBE_2	PF08402.5	gi|332795979|ref|YP_004457479.1|	-	1.3e-09	37.9	0.0	2.8e-09	36.8	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
AAA_15	PF13175.1	gi|332795979|ref|YP_004457479.1|	-	6e-08	32.1	0.0	5.3e-05	22.4	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_19	PF13245.1	gi|332795979|ref|YP_004457479.1|	-	0.00013	21.6	0.0	0.00036	20.2	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|332795979|ref|YP_004457479.1|	-	0.00075	19.5	0.1	0.0016	18.4	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|332795979|ref|YP_004457479.1|	-	0.0014	17.9	0.6	0.046	12.9	0.4	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|332795979|ref|YP_004457479.1|	-	0.0022	17.7	0.1	0.0038	16.9	0.0	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
TOBE	PF03459.12	gi|332795979|ref|YP_004457479.1|	-	0.0031	17.5	0.2	0.018	15.1	0.0	2.4	3	0	0	3	3	2	1	TOBE	domain
NACHT	PF05729.7	gi|332795979|ref|YP_004457479.1|	-	0.0092	15.6	0.0	0.019	14.6	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA_30	PF13604.1	gi|332795979|ref|YP_004457479.1|	-	0.015	14.8	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|332795979|ref|YP_004457479.1|	-	0.017	14.8	0.1	0.28	10.8	0.0	2.4	2	0	0	2	2	2	0	NTPase
AAA_23	PF13476.1	gi|332795979|ref|YP_004457479.1|	-	0.017	15.4	5.2	0.038	14.3	0.5	2.6	2	1	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|332795979|ref|YP_004457479.1|	-	0.019	14.1	0.0	0.04	13.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|332795979|ref|YP_004457479.1|	-	0.021	14.9	0.1	0.062	13.4	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|332795979|ref|YP_004457479.1|	-	0.037	14.8	1.6	0.13	13.0	0.5	2.5	2	1	0	2	2	2	0	AAA	domain
AAA_11	PF13086.1	gi|332795979|ref|YP_004457479.1|	-	0.042	13.4	0.0	0.13	11.8	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
Mur_ligase_M	PF08245.7	gi|332795979|ref|YP_004457479.1|	-	0.046	13.7	0.0	0.12	12.3	0.0	1.7	2	0	0	2	2	1	0	Mur	ligase	middle	domain
MobB	PF03205.9	gi|332795979|ref|YP_004457479.1|	-	0.063	12.9	0.1	0.14	11.8	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.1	gi|332795979|ref|YP_004457479.1|	-	0.066	12.7	0.0	0.17	11.4	0.0	1.7	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
RuvB_N	PF05496.7	gi|332795979|ref|YP_004457479.1|	-	0.07	12.1	0.0	0.15	11.0	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|332795979|ref|YP_004457479.1|	-	0.07	13.0	0.0	0.2	11.5	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|332795979|ref|YP_004457479.1|	-	0.072	13.2	0.3	0.23	11.6	0.2	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|332795979|ref|YP_004457479.1|	-	0.073	13.2	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_5	PF07728.9	gi|332795979|ref|YP_004457479.1|	-	0.078	12.7	0.1	0.14	11.8	0.1	1.6	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|332795979|ref|YP_004457479.1|	-	0.089	13.1	0.3	0.24	11.7	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
Pox_A32	PF04665.7	gi|332795979|ref|YP_004457479.1|	-	0.098	11.9	0.0	0.19	10.9	0.0	1.4	1	0	0	1	1	1	0	Poxvirus	A32	protein
Glyco_hydro_15	PF00723.16	gi|332795980|ref|YP_004457480.1|	-	1.5e-05	23.7	0.1	0.00045	18.9	0.2	2.1	2	0	0	2	2	2	2	Glycosyl	hydrolases	family	15
Rifin_STEVOR	PF02009.11	gi|332795980|ref|YP_004457480.1|	-	5	6.6	6.0	7.5	6.1	4.1	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Cpn60_TCP1	PF00118.19	gi|332795981|ref|YP_004457481.1|	-	3.8e-151	504.0	18.0	4.3e-151	503.8	12.5	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
FliH	PF02108.11	gi|332795981|ref|YP_004457481.1|	-	0.015	15.1	0.3	0.13	12.1	0.0	2.7	3	0	0	3	3	3	0	Flagellar	assembly	protein	FliH
OrfB_Zn_ribbon	PF07282.6	gi|332795982|ref|YP_004457482.1|	-	7.1e-19	67.2	1.5	1.7e-18	66.0	0.3	2.1	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332795982|ref|YP_004457482.1|	-	8.1e-07	28.6	1.0	1.4e-06	27.8	0.7	1.4	1	0	0	1	1	1	1	Probable	transposase
zf-C2HC_2	PF13913.1	gi|332795982|ref|YP_004457482.1|	-	0.093	12.4	0.3	0.19	11.4	0.2	1.5	1	0	0	1	1	1	0	zinc-finger	of	a	C2HC-type
Pirin	PF02678.11	gi|332795983|ref|YP_004457483.1|	-	7.6e-39	131.8	0.1	9.8e-38	128.3	0.0	2.1	2	0	0	2	2	2	1	Pirin
Pirin_C	PF05726.8	gi|332795983|ref|YP_004457483.1|	-	6e-28	96.9	0.0	8.4e-27	93.2	0.0	2.2	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
Cupin_2	PF07883.6	gi|332795983|ref|YP_004457483.1|	-	0.00044	19.6	1.5	0.14	11.7	0.2	2.5	2	0	0	2	2	2	2	Cupin	domain
Cupin_3	PF05899.7	gi|332795983|ref|YP_004457483.1|	-	0.051	12.9	0.4	7.6	6.0	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF861)
Transglut_core	PF01841.14	gi|332795985|ref|YP_004457485.1|	-	1.8e-20	73.2	0.0	3e-20	72.4	0.0	1.4	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Bact_transglu_N	PF08379.5	gi|332795985|ref|YP_004457485.1|	-	5.4e-14	52.2	0.1	8.6e-14	51.6	0.1	1.3	1	0	0	1	1	1	1	Bacterial	transglutaminase-like	N-terminal	region
Transglut_core3	PF13471.1	gi|332795985|ref|YP_004457485.1|	-	3.3e-05	23.6	0.0	5.2e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
DUF553	PF04473.7	gi|332795985|ref|YP_004457485.1|	-	0.00016	20.9	0.0	0.00035	19.8	0.0	1.6	1	1	0	1	1	1	1	Transglutaminase-like	domain
CP_ATPgrasp_1	PF04174.8	gi|332795986|ref|YP_004457486.1|	-	6e-77	258.4	0.0	7.1e-77	258.2	0.0	1.1	1	0	0	1	1	1	1	A	circularly	permuted	ATPgrasp
CP_ATPgrasp_2	PF14403.1	gi|332795986|ref|YP_004457486.1|	-	6.9e-11	41.4	0.0	2.8e-06	26.2	0.0	2.3	2	1	0	2	2	2	2	Circularly	permuted	ATP-grasp	type	2
ATP-grasp_3	PF02655.9	gi|332795986|ref|YP_004457486.1|	-	0.00022	21.1	0.7	0.014	15.2	0.0	2.4	2	0	0	2	2	2	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.1	gi|332795986|ref|YP_004457486.1|	-	0.0032	16.5	0.0	0.0098	15.0	0.0	1.8	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
ATP-grasp	PF02222.17	gi|332795986|ref|YP_004457486.1|	-	0.0049	16.2	0.1	0.01	15.2	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332795986|ref|YP_004457486.1|	-	0.0092	14.7	0.0	1.6	7.3	0.0	2.2	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.1	gi|332795986|ref|YP_004457486.1|	-	0.021	14.5	0.0	0.038	13.7	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
AAA_14	PF13173.1	gi|332795987|ref|YP_004457487.1|	-	9.3e-10	38.5	0.1	7.9e-09	35.4	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|332795987|ref|YP_004457487.1|	-	0.00028	21.0	0.0	0.087	12.9	0.0	2.5	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|332795987|ref|YP_004457487.1|	-	0.00064	19.4	3.4	0.12	12.0	0.1	3.2	3	1	1	4	4	4	2	Archaeal	ATPase
HTH_IclR	PF09339.5	gi|332795987|ref|YP_004457487.1|	-	0.0034	16.9	0.0	0.0083	15.6	0.0	1.7	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332795987|ref|YP_004457487.1|	-	0.0077	15.8	0.0	0.05	13.2	0.0	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|332795987|ref|YP_004457487.1|	-	0.023	14.6	0.0	0.073	13.0	0.0	1.8	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_11	PF08279.7	gi|332795987|ref|YP_004457487.1|	-	0.026	14.1	0.0	0.12	12.0	0.0	2.3	1	0	0	1	1	1	0	HTH	domain
AAA_16	PF13191.1	gi|332795987|ref|YP_004457487.1|	-	0.1	12.5	0.0	0.31	10.9	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
HTH_5	PF01022.15	gi|332795988|ref|YP_004457488.1|	-	2.4e-06	27.1	0.1	4.1e-06	26.3	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|332795988|ref|YP_004457488.1|	-	3.9e-06	26.1	0.8	7e-06	25.3	0.5	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|332795988|ref|YP_004457488.1|	-	0.00028	20.8	0.1	0.00054	19.9	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|332795988|ref|YP_004457488.1|	-	0.00076	19.2	0.0	0.001	18.8	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
COMPASS-Shg1	PF05205.7	gi|332795988|ref|YP_004457488.1|	-	0.022	15.0	0.5	0.027	14.7	0.4	1.4	1	1	0	1	1	1	0	COMPASS	(Complex	proteins	associated	with	Set1p)	component	shg1
DUF1495	PF07381.6	gi|332795988|ref|YP_004457488.1|	-	0.056	13.1	1.2	0.62	9.7	0.1	2.4	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_Tnp_IS630	PF01710.11	gi|332795988|ref|YP_004457488.1|	-	0.1	12.2	0.6	0.12	12.0	0.4	1.2	1	0	0	1	1	1	0	Transposase
HHH_7	PF14635.1	gi|332795988|ref|YP_004457488.1|	-	0.11	12.5	0.2	0.13	12.3	0.2	1.1	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
HTH_45	PF14947.1	gi|332795988|ref|YP_004457488.1|	-	0.22	11.3	4.7	0.21	11.4	2.5	1.6	1	1	0	1	1	1	0	Winged	helix-turn-helix
POR_N	PF01855.14	gi|332795989|ref|YP_004457489.1|	-	7e-61	205.6	0.0	1.1e-60	205.0	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|332795989|ref|YP_004457489.1|	-	3.7e-33	114.8	0.6	1.1e-32	113.2	0.1	2.0	3	0	0	3	3	3	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|332795989|ref|YP_004457489.1|	-	2.8e-05	23.6	0.3	8.6e-05	22.0	0.1	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Transketolase_C	PF02780.15	gi|332795989|ref|YP_004457489.1|	-	0.015	15.1	0.0	0.046	13.6	0.0	1.8	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
RasGAP_C	PF03836.10	gi|332795989|ref|YP_004457489.1|	-	0.033	13.8	0.1	0.072	12.7	0.1	1.6	1	0	0	1	1	1	0	RasGAP	C-terminus
TPP_enzyme_C	PF02775.16	gi|332795990|ref|YP_004457490.1|	-	2.9e-33	114.6	0.1	5.1e-33	113.8	0.0	1.4	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|332795990|ref|YP_004457490.1|	-	9.9e-18	63.8	0.2	2.2e-17	62.7	0.1	1.6	1	0	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
DrsE	PF02635.10	gi|332795990|ref|YP_004457490.1|	-	0.057	13.4	0.0	0.2	11.6	0.0	2.0	1	1	0	1	1	1	0	DsrE/DsrF-like	family
CBS	PF00571.23	gi|332795991|ref|YP_004457491.1|	-	2.1e-45	152.2	13.6	4e-13	48.9	0.2	4.8	4	1	0	4	4	4	4	CBS	domain
DUF1840	PF08895.6	gi|332795991|ref|YP_004457491.1|	-	0.0076	16.2	0.2	2.4	8.1	0.0	2.9	4	0	0	4	4	4	2	Domain	of	unknown	function	(DUF1840)
CBS	PF00571.23	gi|332795992|ref|YP_004457492.1|	-	1.5e-29	101.4	1.2	4.4e-15	55.1	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
Citrate_synt	PF00285.16	gi|332795993|ref|YP_004457493.1|	-	3.5e-126	420.7	0.0	4e-126	420.5	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
ABC2_membrane_2	PF12679.2	gi|332795994|ref|YP_004457494.1|	-	3.9e-18	65.3	2.6	7.9e-18	64.2	1.8	1.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|332795994|ref|YP_004457494.1|	-	2e-07	30.4	50.2	1.7e-06	27.3	34.8	2.0	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|332795994|ref|YP_004457494.1|	-	0.66	8.9	45.7	6.4	5.7	31.6	2.1	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|332795995|ref|YP_004457495.1|	-	2.7e-28	98.9	0.0	6e-28	97.8	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|332795995|ref|YP_004457495.1|	-	3.5e-17	63.3	0.5	1.9e-10	41.2	0.1	2.4	1	1	1	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|332795995|ref|YP_004457495.1|	-	0.00029	20.3	0.1	0.54	9.6	0.2	2.2	1	1	1	2	2	2	2	AAA-like	domain
AAA_22	PF13401.1	gi|332795995|ref|YP_004457495.1|	-	0.0095	16.0	0.3	0.11	12.6	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|332795995|ref|YP_004457495.1|	-	0.011	14.8	2.0	0.011	14.8	1.4	2.6	2	1	1	3	3	3	0	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|332795995|ref|YP_004457495.1|	-	0.047	12.5	0.0	0.078	11.8	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
MutS_V	PF00488.16	gi|332795995|ref|YP_004457495.1|	-	0.083	12.2	0.6	3.3	7.0	0.3	2.1	2	0	0	2	2	2	0	MutS	domain	V
AAA_30	PF13604.1	gi|332795995|ref|YP_004457495.1|	-	0.092	12.3	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|332795995|ref|YP_004457495.1|	-	0.54	10.5	8.3	2.3	8.5	5.7	2.2	1	1	0	1	1	1	0	AAA	domain
GTP_EFTU_D2	PF03144.20	gi|332795995|ref|YP_004457495.1|	-	1.1	9.3	4.7	0.58	10.3	1.3	2.0	2	0	0	2	2	2	0	Elongation	factor	Tu	domain	2
Phage_holin_1	PF04531.8	gi|332795996|ref|YP_004457496.1|	-	1.6	8.8	5.8	12	6.0	0.5	2.6	2	1	0	2	2	2	0	Bacteriophage	holin
HTH_34	PF13601.1	gi|332795997|ref|YP_004457497.1|	-	9.8e-17	60.7	0.3	1.2e-16	60.5	0.2	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|332795997|ref|YP_004457497.1|	-	6.1e-09	35.5	0.0	8.3e-09	35.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|332795997|ref|YP_004457497.1|	-	3.4e-08	33.0	0.0	5e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|332795997|ref|YP_004457497.1|	-	2e-05	24.2	0.1	3.4e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|332795997|ref|YP_004457497.1|	-	2.5e-05	23.5	0.3	3.9e-05	22.9	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|332795997|ref|YP_004457497.1|	-	2.9e-05	24.2	0.0	3.8e-05	23.9	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|332795997|ref|YP_004457497.1|	-	0.00016	21.2	0.2	0.00019	20.9	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
MarR_2	PF12802.2	gi|332795997|ref|YP_004457497.1|	-	0.00044	19.8	0.0	0.00063	19.3	0.0	1.2	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|332795997|ref|YP_004457497.1|	-	0.0015	18.4	0.2	0.028	14.3	0.0	2.1	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
PadR	PF03551.9	gi|332795997|ref|YP_004457497.1|	-	0.0019	17.9	0.0	0.0026	17.4	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF2513	PF10711.4	gi|332795997|ref|YP_004457497.1|	-	0.0042	17.1	0.1	0.0049	16.9	0.0	1.1	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
Cullin	PF00888.17	gi|332795997|ref|YP_004457497.1|	-	0.0052	15.3	1.6	0.59	8.6	0.1	2.0	1	1	1	2	2	2	2	Cullin	family
TrmB	PF01978.14	gi|332795997|ref|YP_004457497.1|	-	0.012	15.3	0.1	0.023	14.3	0.0	1.4	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|332795997|ref|YP_004457497.1|	-	0.017	14.8	4.5	0.028	14.2	3.1	1.4	1	1	0	1	1	1	0	Winged	helix-turn-helix
DDE_Tnp_2	PF04693.7	gi|332795997|ref|YP_004457497.1|	-	0.021	13.8	0.1	0.024	13.6	0.1	1.1	1	0	0	1	1	1	0	Archaeal	putative	transposase	ISC1217
Sulfolobus_pRN	PF05584.6	gi|332795997|ref|YP_004457497.1|	-	0.025	14.5	0.4	0.036	14.0	0.3	1.4	1	1	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_11	PF08279.7	gi|332795997|ref|YP_004457497.1|	-	0.035	13.7	0.2	0.053	13.1	0.1	1.4	1	0	0	1	1	1	0	HTH	domain
Phage_rep_org_N	PF09681.5	gi|332795997|ref|YP_004457497.1|	-	0.059	12.9	2.0	0.21	11.1	0.2	1.9	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
B-block_TFIIIC	PF04182.7	gi|332795997|ref|YP_004457497.1|	-	0.084	12.7	0.4	0.11	12.3	0.3	1.4	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
PuR_N	PF09182.5	gi|332795997|ref|YP_004457497.1|	-	0.094	12.3	0.3	9	5.9	0.1	2.2	1	1	1	2	2	2	0	Bacterial	purine	repressor,	N-terminal
CheD	PF03975.8	gi|332795997|ref|YP_004457497.1|	-	0.11	12.3	0.1	0.13	12.0	0.1	1.1	1	0	0	1	1	1	0	CheD	chemotactic	sensory	transduction
Acyl-CoA_dh_1	PF00441.19	gi|332795998|ref|YP_004457498.1|	-	8.9e-39	132.9	0.2	1.3e-38	132.4	0.1	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|332795998|ref|YP_004457498.1|	-	6.7e-21	74.9	0.0	1.7e-20	73.6	0.0	1.8	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|332795998|ref|YP_004457498.1|	-	2.1e-16	59.1	0.1	4.4e-16	58.1	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|332795998|ref|YP_004457498.1|	-	3.2e-11	43.6	0.0	9.8e-11	42.0	0.0	1.7	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
TrmB	PF01978.14	gi|332795999|ref|YP_004457499.1|	-	1.8e-10	40.3	0.1	2.3e-10	39.9	0.1	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|332795999|ref|YP_004457499.1|	-	2.2e-07	30.3	0.3	3.4e-07	29.8	0.2	1.2	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.17	gi|332795999|ref|YP_004457499.1|	-	1.3e-05	24.7	0.1	2.1e-05	24.1	0.1	1.2	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|332795999|ref|YP_004457499.1|	-	1.6e-05	25.1	0.1	2.7e-05	24.3	0.1	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
GntR	PF00392.16	gi|332795999|ref|YP_004457499.1|	-	5.2e-05	22.5	0.0	9.4e-05	21.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_5	PF01022.15	gi|332795999|ref|YP_004457499.1|	-	5.8e-05	22.6	0.0	0.00041	19.9	0.1	2.0	1	1	1	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TFIIE_alpha	PF02002.12	gi|332795999|ref|YP_004457499.1|	-	0.0002	20.8	0.1	0.00024	20.5	0.1	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
Fe_dep_repress	PF01325.14	gi|332795999|ref|YP_004457499.1|	-	0.00023	21.0	0.2	0.00062	19.6	0.1	1.7	1	1	1	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.2	gi|332795999|ref|YP_004457499.1|	-	0.00026	20.6	0.0	0.00033	20.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
RP-C	PF03428.8	gi|332795999|ref|YP_004457499.1|	-	0.0012	18.3	0.1	0.0017	17.8	0.1	1.2	1	0	0	1	1	1	1	Replication	protein	C	N-terminal	domain
HTH_Crp_2	PF13545.1	gi|332795999|ref|YP_004457499.1|	-	0.01	15.6	0.0	0.014	15.1	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|332795999|ref|YP_004457499.1|	-	0.011	15.4	0.0	0.017	14.8	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
DUF387	PF04079.11	gi|332795999|ref|YP_004457499.1|	-	0.012	15.0	0.0	0.015	14.6	0.0	1.1	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
DUF4423	PF14394.1	gi|332795999|ref|YP_004457499.1|	-	0.017	14.6	0.1	0.043	13.3	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_24	PF13412.1	gi|332795999|ref|YP_004457499.1|	-	0.019	14.3	0.0	0.034	13.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
B-block_TFIIIC	PF04182.7	gi|332795999|ref|YP_004457499.1|	-	0.052	13.4	0.0	0.086	12.6	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Penicillinase_R	PF03965.11	gi|332795999|ref|YP_004457499.1|	-	0.054	13.5	0.1	0.075	13.1	0.0	1.4	1	1	0	1	1	1	0	Penicillinase	repressor
HTH_10	PF04967.7	gi|332795999|ref|YP_004457499.1|	-	0.057	13.0	0.0	0.099	12.2	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_DeoR	PF08220.7	gi|332795999|ref|YP_004457499.1|	-	0.089	12.3	0.1	0.15	11.5	0.1	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|332795999|ref|YP_004457499.1|	-	0.12	12.5	0.0	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_17	PF12728.2	gi|332795999|ref|YP_004457499.1|	-	0.13	12.5	0.9	0.78	10.0	0.3	2.4	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|332795999|ref|YP_004457499.1|	-	0.14	11.9	0.0	0.22	11.3	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
Ldh_1_N	PF00056.18	gi|332796000|ref|YP_004457500.1|	-	2.8e-26	92.0	0.0	6.2e-26	90.9	0.0	1.6	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|332796000|ref|YP_004457500.1|	-	1.4e-07	31.4	0.0	2.5e-07	30.6	0.0	1.4	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
MxiM	PF11441.3	gi|332796000|ref|YP_004457500.1|	-	0.027	14.5	0.0	0.084	12.9	0.0	1.9	1	0	0	1	1	1	0	Pilot	protein	MxiM
F420_oxidored	PF03807.12	gi|332796000|ref|YP_004457500.1|	-	0.032	14.6	0.1	0.16	12.4	0.0	2.2	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.13	gi|332796000|ref|YP_004457500.1|	-	0.034	13.8	0.0	0.059	13.0	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF2173	PF09941.4	gi|332796002|ref|YP_004457502.1|	-	0.00023	21.0	0.0	0.00037	20.3	0.0	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
SdpI	PF13630.1	gi|332796002|ref|YP_004457502.1|	-	0.27	10.9	6.7	0.082	12.6	2.6	1.6	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
FtsX	PF02687.16	gi|332796002|ref|YP_004457502.1|	-	0.76	9.5	6.5	1.2	8.8	4.5	1.3	1	0	0	1	1	1	0	FtsX-like	permease	family
Cytochrom_B_N_2	PF13631.1	gi|332796003|ref|YP_004457503.1|	-	6.2e-53	179.0	5.4	6.2e-53	179.0	3.8	2.9	3	2	1	4	4	4	1	Cytochrome	b(N-terminal)/b6/petB
PaREP1	PF05942.6	gi|332796004|ref|YP_004457504.1|	-	2.6e-24	85.3	0.9	3.1e-24	85.0	0.1	1.5	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
Mistic	PF11458.3	gi|332796004|ref|YP_004457504.1|	-	0.069	13.5	1.5	0.17	12.3	0.1	2.2	3	0	0	3	3	3	0	Membrane-integrating	protein	Mistic
GFO_IDH_MocA	PF01408.17	gi|332796005|ref|YP_004457505.1|	-	2.4e-18	66.7	0.1	3.7e-18	66.1	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|332796005|ref|YP_004457505.1|	-	8.1e-07	28.8	0.0	1.3e-06	28.1	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_2	PF03446.10	gi|332796005|ref|YP_004457505.1|	-	0.0017	18.2	0.0	0.028	14.2	0.0	2.1	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DUF4078	PF13300.1	gi|332796005|ref|YP_004457505.1|	-	0.0069	16.4	1.0	0.012	15.6	0.1	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4078)
ApbA	PF02558.11	gi|332796005|ref|YP_004457505.1|	-	0.031	13.7	0.0	0.049	13.0	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Shikimate_DH	PF01488.15	gi|332796005|ref|YP_004457505.1|	-	0.034	14.2	0.0	0.1	12.7	0.0	1.8	1	1	1	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.13	gi|332796005|ref|YP_004457505.1|	-	0.049	13.6	0.0	0.074	13.0	0.0	1.3	1	0	0	1	1	1	0	TrkA-N	domain
F420_oxidored	PF03807.12	gi|332796005|ref|YP_004457505.1|	-	0.067	13.6	0.0	0.12	12.8	0.0	1.4	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Sugar_tr	PF00083.19	gi|332796006|ref|YP_004457506.1|	-	1.3e-65	221.7	17.8	1.5e-65	221.5	12.3	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332796006|ref|YP_004457506.1|	-	2.9e-36	124.9	28.5	2.9e-36	124.9	19.8	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
SAF	PF08666.7	gi|332796007|ref|YP_004457507.1|	-	2.1e-11	44.0	1.2	9.1e-11	42.0	0.8	1.9	1	1	0	1	1	1	1	SAF	domain
DUF2577	PF10844.3	gi|332796007|ref|YP_004457507.1|	-	0.013	15.4	0.0	0.049	13.6	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2577)
SET	PF00856.23	gi|332796007|ref|YP_004457507.1|	-	0.083	13.1	0.0	13	6.1	0.0	2.7	2	1	1	3	3	3	0	SET	domain
GD_AH_C	PF04295.8	gi|332796008|ref|YP_004457508.1|	-	4.2e-128	427.3	0.3	4.7e-128	427.2	0.2	1.0	1	0	0	1	1	1	1	D-galactarate	dehydratase	/	Altronate	hydrolase,	C	terminus
ApbA_C	PF08546.6	gi|332796008|ref|YP_004457508.1|	-	0.062	13.3	0.0	11	6.0	0.0	2.5	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA	C	terminal
WHEP-TRS	PF00458.15	gi|332796008|ref|YP_004457508.1|	-	0.11	12.2	0.0	0.23	11.1	0.0	1.5	1	0	0	1	1	1	0	WHEP-TRS	domain
MR_MLE_C	PF13378.1	gi|332796009|ref|YP_004457509.1|	-	1.5e-20	73.2	0.0	4.3e-20	71.7	0.0	1.7	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|332796009|ref|YP_004457509.1|	-	4.3e-15	55.9	0.0	6.7e-15	55.3	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|332796009|ref|YP_004457509.1|	-	1.4e-05	25.0	0.0	2.5e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Glyco_hydro_53	PF07745.8	gi|332796009|ref|YP_004457509.1|	-	0.071	11.8	0.0	0.11	11.2	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	53
FCD	PF07729.7	gi|332796010|ref|YP_004457510.1|	-	5e-23	81.7	0.0	1.4e-22	80.3	0.0	1.6	2	0	0	2	2	2	1	FCD	domain
GntR	PF00392.16	gi|332796010|ref|YP_004457510.1|	-	2.6e-15	55.5	0.0	4.9e-15	54.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
TFIIE_alpha	PF02002.12	gi|332796010|ref|YP_004457510.1|	-	0.0016	17.9	7.2	0.012	15.1	0.0	3.0	2	1	1	3	3	3	2	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|332796010|ref|YP_004457510.1|	-	0.0018	17.6	0.0	0.0061	15.9	0.0	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|332796010|ref|YP_004457510.1|	-	0.002	18.3	0.0	0.0046	17.2	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|332796010|ref|YP_004457510.1|	-	0.004	16.8	0.1	0.013	15.2	0.0	1.8	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4473	PF14747.1	gi|332796010|ref|YP_004457510.1|	-	0.0053	16.9	3.2	2.9	8.1	0.0	2.8	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF4473)
HTH_5	PF01022.15	gi|332796010|ref|YP_004457510.1|	-	0.012	15.2	0.0	0.38	10.4	0.0	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
DUF2815	PF10991.3	gi|332796010|ref|YP_004457510.1|	-	0.015	14.8	0.6	0.37	10.2	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2815)
Phage_rep_O	PF04492.8	gi|332796010|ref|YP_004457510.1|	-	0.018	15.2	0.1	0.041	14.0	0.0	1.5	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
EAP30	PF04157.11	gi|332796010|ref|YP_004457510.1|	-	0.026	13.7	0.1	0.068	12.3	0.0	1.7	2	0	0	2	2	2	0	EAP30/Vps36	family
FadR_C	PF07840.7	gi|332796010|ref|YP_004457510.1|	-	0.043	13.4	0.1	0.11	12.1	0.0	1.6	1	1	0	1	1	1	0	FadR	C-terminal	domain
DUF1315	PF07023.7	gi|332796010|ref|YP_004457510.1|	-	0.085	12.7	0.6	0.29	11.0	0.0	2.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1315)
PhoU	PF01895.14	gi|332796010|ref|YP_004457510.1|	-	0.27	11.6	2.5	27	5.2	0.0	3.1	3	1	0	3	3	3	0	PhoU	domain
Sugar_tr	PF00083.19	gi|332796011|ref|YP_004457511.1|	-	4.9e-23	81.4	12.0	6e-23	81.1	8.3	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
DUF2244	PF10003.4	gi|332796011|ref|YP_004457511.1|	-	5.2	6.4	12.4	0.33	10.3	0.6	2.2	2	0	0	2	2	2	0	Integral	membrane	protein	(DUF2244)
adh_short	PF00106.20	gi|332796012|ref|YP_004457512.1|	-	1.2e-22	80.6	0.0	2.4e-22	79.5	0.0	1.5	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|332796012|ref|YP_004457512.1|	-	1.9e-19	70.4	0.0	2.8e-19	69.8	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|332796012|ref|YP_004457512.1|	-	7.2e-08	32.2	0.2	8.2e-07	28.8	0.2	2.1	1	1	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|332796012|ref|YP_004457512.1|	-	0.00019	20.9	0.0	0.00026	20.5	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|332796012|ref|YP_004457512.1|	-	0.00049	20.1	0.0	0.00092	19.2	0.0	1.4	1	0	0	1	1	1	1	NADH(P)-binding
DUF1776	PF08643.5	gi|332796012|ref|YP_004457512.1|	-	0.031	13.4	0.0	0.039	13.1	0.0	1.2	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
2-Hacid_dh_C	PF02826.14	gi|332796012|ref|YP_004457512.1|	-	0.081	12.0	0.1	0.3	10.2	0.0	1.8	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Aldedh	PF00171.17	gi|332796013|ref|YP_004457513.1|	-	1.2e-148	495.2	0.0	1.4e-148	495.0	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|332796013|ref|YP_004457513.1|	-	2.1e-06	26.7	0.0	3.1e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
DUF1487	PF07368.6	gi|332796013|ref|YP_004457513.1|	-	0.001	18.3	0.0	0.037	13.2	0.0	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1487)
MR_MLE_C	PF13378.1	gi|332796014|ref|YP_004457514.1|	-	3.6e-24	84.8	0.0	1e-23	83.3	0.0	1.7	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|332796014|ref|YP_004457514.1|	-	3.4e-20	72.1	0.0	6.4e-20	71.2	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|332796014|ref|YP_004457514.1|	-	5.8e-17	61.9	0.0	1.5e-16	60.7	0.0	1.7	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
SGL	PF08450.7	gi|332796015|ref|YP_004457515.1|	-	6.7e-79	264.7	0.0	7.9e-79	264.4	0.0	1.1	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|332796015|ref|YP_004457515.1|	-	0.019	14.9	0.0	0.1	12.6	0.0	2.1	2	0	0	2	2	2	0	Arylesterase
DUF839	PF05787.8	gi|332796015|ref|YP_004457515.1|	-	0.11	11.4	0.0	0.92	8.3	0.0	2.0	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF839)
Str_synth	PF03088.11	gi|332796015|ref|YP_004457515.1|	-	0.13	12.3	0.0	0.34	10.9	0.0	1.7	1	0	0	1	1	1	0	Strictosidine	synthase
Reg_prop	PF07494.6	gi|332796015|ref|YP_004457515.1|	-	0.44	10.7	4.9	9.3	6.6	0.1	3.4	3	0	0	3	3	3	0	Two	component	regulator	propeller
DUF608	PF04685.8	gi|332796016|ref|YP_004457516.1|	-	3.7e-67	226.6	0.0	4.9e-67	226.1	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|332796016|ref|YP_004457516.1|	-	1e-45	156.2	0.1	1.6e-45	155.5	0.0	1.3	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|332796016|ref|YP_004457516.1|	-	4.2e-05	21.9	0.0	7.9e-05	21.0	0.0	1.4	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
Glyco_hydro_52	PF03512.8	gi|332796016|ref|YP_004457516.1|	-	0.0049	15.5	0.1	0.0079	14.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	52
AA_permease_2	PF13520.1	gi|332796017|ref|YP_004457517.1|	-	2e-27	95.7	47.6	2.5e-27	95.5	33.0	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332796017|ref|YP_004457517.1|	-	4.7e-17	61.5	40.1	5.5e-17	61.2	27.8	1.1	1	0	0	1	1	1	1	Amino	acid	permease
DUF4239	PF14023.1	gi|332796017|ref|YP_004457517.1|	-	0.36	10.1	5.1	0.33	10.2	2.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4239)
DUF1352	PF07086.7	gi|332796017|ref|YP_004457517.1|	-	5.2	6.6	9.0	1.1	8.7	3.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1352)
DUF871	PF05913.6	gi|332796018|ref|YP_004457518.1|	-	1.2e-44	152.5	0.0	1.4e-44	152.4	0.0	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF871)
HTH_3	PF01381.17	gi|332796018|ref|YP_004457518.1|	-	0.069	13.0	0.0	2.9	7.8	0.0	2.7	2	0	0	2	2	2	0	Helix-turn-helix
DUF2114	PF09887.4	gi|332796018|ref|YP_004457518.1|	-	0.15	10.4	0.0	0.18	10.1	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
SIS	PF01380.17	gi|332796019|ref|YP_004457519.1|	-	4.1e-38	129.9	1.3	8.8e-26	90.0	0.3	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|332796019|ref|YP_004457519.1|	-	1.8e-17	63.5	0.0	3.5e-17	62.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|332796019|ref|YP_004457519.1|	-	5.5e-14	51.9	0.0	9.5e-14	51.2	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|332796019|ref|YP_004457519.1|	-	6.9e-12	44.7	0.0	7.5e-08	31.4	0.0	2.4	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|332796019|ref|YP_004457519.1|	-	5e-05	23.0	3.0	0.00022	20.9	0.5	2.9	1	1	1	2	2	2	1	SIS	domain
GATase_4	PF13230.1	gi|332796019|ref|YP_004457519.1|	-	5.1e-05	22.0	0.0	0.00013	20.7	0.0	1.7	1	1	0	1	1	1	1	Glutamine	amidotransferases	class-II
ParA	PF10609.4	gi|332796019|ref|YP_004457519.1|	-	0.023	14.5	1.0	0.24	11.3	0.0	2.7	2	0	0	2	2	2	0	ParA/MinD	ATPase	like
Amidohydro_1	PF01979.15	gi|332796020|ref|YP_004457520.1|	-	1.6e-20	74.0	0.3	2.3e-20	73.5	0.2	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|332796020|ref|YP_004457520.1|	-	4.4e-12	45.9	0.2	1.4e-07	31.1	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|332796020|ref|YP_004457520.1|	-	4.5e-11	43.3	0.0	2.7e-05	24.3	0.0	2.7	1	1	1	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|332796020|ref|YP_004457520.1|	-	6.1e-11	41.9	0.1	2e-10	40.3	0.0	1.9	1	0	0	1	1	1	1	Amidohydrolase
DUF608	PF04685.8	gi|332796021|ref|YP_004457521.1|	-	1.6e-98	329.8	1.9	2.7e-98	329.0	1.3	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|332796021|ref|YP_004457521.1|	-	2e-46	158.4	0.1	3.4e-46	157.7	0.1	1.4	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|332796021|ref|YP_004457521.1|	-	0.0021	16.3	0.3	0.0032	15.7	0.2	1.2	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
GDE_C	PF06202.9	gi|332796021|ref|YP_004457521.1|	-	0.0025	16.5	0.2	0.045	12.4	0.2	2.2	1	1	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
Glyco_hydro_31	PF01055.21	gi|332796022|ref|YP_004457522.1|	-	2e-140	468.5	1.1	2.4e-140	468.2	0.8	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|332796022|ref|YP_004457522.1|	-	4.5e-18	64.8	0.0	1.2e-17	63.5	0.0	1.8	1	0	0	1	1	1	1	Galactose	mutarotase-like
Glyco_hydro_38	PF01074.17	gi|332796024|ref|YP_004457524.1|	-	1.9e-75	253.6	0.5	4.2e-75	252.5	0.2	1.6	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_38C	PF07748.8	gi|332796024|ref|YP_004457524.1|	-	3.1e-75	253.7	2.8	4.1e-75	253.3	1.9	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Alpha-mann_mid	PF09261.6	gi|332796024|ref|YP_004457524.1|	-	7.1e-18	64.6	0.3	2e-17	63.1	0.0	2.0	2	0	0	2	2	2	1	Alpha	mannosidase,	middle	domain
DUF3510	PF12022.3	gi|332796025|ref|YP_004457525.1|	-	0.025	14.6	1.2	0.037	14.1	0.8	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3510)
Pyr_excise	PF03013.9	gi|332796025|ref|YP_004457525.1|	-	0.074	12.8	0.5	0.096	12.4	0.4	1.3	1	0	0	1	1	1	0	Pyrimidine	dimer	DNA	glycosylase
Phage_integrase	PF00589.17	gi|332796025|ref|YP_004457525.1|	-	0.079	12.6	0.1	0.11	12.1	0.1	1.2	1	0	0	1	1	1	0	Phage	integrase	family
Hydrolase_3	PF08282.7	gi|332796025|ref|YP_004457525.1|	-	0.18	11.3	1.6	0.19	11.2	1.1	1.1	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
BPD_transp_1	PF00528.17	gi|332796026|ref|YP_004457526.1|	-	1.3e-24	86.7	18.2	1.3e-24	86.7	12.6	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|332796026|ref|YP_004457526.1|	-	0.00016	20.9	3.0	0.00016	20.9	2.1	3.5	3	1	0	3	3	3	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF3796	PF12676.2	gi|332796027|ref|YP_004457527.1|	-	0.0092	16.1	6.0	0.0092	16.1	4.1	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3796)
DUF3955	PF13127.1	gi|332796027|ref|YP_004457527.1|	-	0.036	13.6	0.6	0.036	13.6	0.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
DUF202	PF02656.10	gi|332796027|ref|YP_004457527.1|	-	0.35	11.1	3.3	9.4	6.5	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF202)
DUF843	PF05814.6	gi|332796027|ref|YP_004457527.1|	-	0.42	10.4	8.7	0.064	13.0	3.5	1.5	2	0	0	2	2	2	0	Baculovirus	protein	of	unknown	function	(DUF843)
SdpI	PF13630.1	gi|332796027|ref|YP_004457527.1|	-	2.9	7.6	5.8	4.8	6.9	4.0	1.3	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
ATPase_gene1	PF09527.5	gi|332796028|ref|YP_004457528.1|	-	0.27	11.0	9.0	0.33	10.8	1.0	2.5	2	0	0	2	2	2	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
Apq12	PF12716.2	gi|332796028|ref|YP_004457528.1|	-	7.4	6.3	10.9	5	6.9	2.1	2.3	2	0	0	2	2	2	0	Nuclear	pore	assembly	and	biogenesis
ABC_tran	PF00005.22	gi|332796029|ref|YP_004457529.1|	-	2.8e-32	111.9	0.0	3.6e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|332796029|ref|YP_004457529.1|	-	6.2e-14	52.0	0.0	1.2e-13	51.1	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|332796029|ref|YP_004457529.1|	-	5.1e-06	26.6	0.7	0.0021	18.0	0.0	2.6	2	1	1	3	3	3	1	AAA	domain
AAA_13	PF13166.1	gi|332796029|ref|YP_004457529.1|	-	6e-05	21.7	0.1	0.14	10.6	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|332796029|ref|YP_004457529.1|	-	0.00026	21.1	0.4	0.002	18.2	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|332796029|ref|YP_004457529.1|	-	0.00041	20.3	0.0	0.00064	19.7	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|332796029|ref|YP_004457529.1|	-	0.0018	17.3	0.2	0.36	9.8	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|332796029|ref|YP_004457529.1|	-	0.0043	16.4	0.0	0.0083	15.5	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Sigma54_activat	PF00158.21	gi|332796029|ref|YP_004457529.1|	-	0.0052	16.2	0.0	0.0096	15.4	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
AAA_29	PF13555.1	gi|332796029|ref|YP_004457529.1|	-	0.0088	15.5	0.0	0.019	14.4	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|332796029|ref|YP_004457529.1|	-	0.01	16.1	0.0	0.021	15.1	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
AAA_10	PF12846.2	gi|332796029|ref|YP_004457529.1|	-	0.019	14.4	0.0	0.084	12.2	0.0	1.9	1	1	0	2	2	2	0	AAA-like	domain
DUF87	PF01935.12	gi|332796029|ref|YP_004457529.1|	-	0.022	14.5	0.0	0.049	13.4	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
Myosin_head	PF00063.16	gi|332796029|ref|YP_004457529.1|	-	0.023	12.7	0.0	0.033	12.2	0.0	1.1	1	0	0	1	1	1	0	Myosin	head	(motor	domain)
DUF258	PF03193.11	gi|332796029|ref|YP_004457529.1|	-	0.029	13.5	0.0	0.045	12.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|332796029|ref|YP_004457529.1|	-	0.054	13.1	0.2	0.14	11.7	0.1	1.7	1	1	0	1	1	1	0	NACHT	domain
NB-ARC	PF00931.17	gi|332796029|ref|YP_004457529.1|	-	0.07	11.9	0.0	0.091	11.5	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
PhoH	PF02562.11	gi|332796029|ref|YP_004457529.1|	-	0.071	12.3	0.0	0.16	11.2	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
Sigma54_activ_2	PF14532.1	gi|332796029|ref|YP_004457529.1|	-	0.076	13.0	0.0	0.18	11.8	0.0	1.7	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|332796029|ref|YP_004457529.1|	-	0.1	12.1	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|332796029|ref|YP_004457529.1|	-	0.12	12.0	0.0	0.23	11.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_33	PF13671.1	gi|332796029|ref|YP_004457529.1|	-	0.12	12.2	0.0	0.17	11.7	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|332796029|ref|YP_004457529.1|	-	0.12	13.1	0.0	0.28	12.0	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|332796029|ref|YP_004457529.1|	-	0.14	11.8	0.0	0.27	11.0	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|332796029|ref|YP_004457529.1|	-	0.14	11.2	0.0	1.5	7.9	0.0	2.1	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
DBI_PRT	PF02277.12	gi|332796029|ref|YP_004457529.1|	-	0.17	10.9	0.0	0.25	10.3	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyltransferase
ABC_tran	PF00005.22	gi|332796030|ref|YP_004457530.1|	-	2e-27	96.1	0.0	2.9e-27	95.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|332796030|ref|YP_004457530.1|	-	1.8e-17	63.4	0.0	3.1e-17	62.6	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|332796030|ref|YP_004457530.1|	-	3e-15	56.9	3.9	1.3e-12	48.2	2.7	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|332796030|ref|YP_004457530.1|	-	1.7e-09	37.2	3.5	2.1e-06	27.0	0.1	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|332796030|ref|YP_004457530.1|	-	4.4e-08	32.6	1.6	2.6e-07	30.1	1.1	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|332796030|ref|YP_004457530.1|	-	7e-08	32.6	0.6	4.9e-07	29.9	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|332796030|ref|YP_004457530.1|	-	1.9e-06	27.5	0.3	0.0072	15.7	0.0	2.4	1	1	0	2	2	2	2	AAA-like	domain
AAA_29	PF13555.1	gi|332796030|ref|YP_004457530.1|	-	1.1e-05	24.8	0.0	2.1e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|332796030|ref|YP_004457530.1|	-	1.5e-05	25.3	1.6	2.5e-05	24.6	1.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|332796030|ref|YP_004457530.1|	-	0.00012	22.1	0.1	0.00017	21.5	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|332796030|ref|YP_004457530.1|	-	0.00016	21.1	0.2	0.013	14.9	0.0	2.9	3	0	0	3	3	3	1	AAA	domain
AAA	PF00004.24	gi|332796030|ref|YP_004457530.1|	-	0.00061	19.9	0.7	0.0062	16.7	0.4	2.2	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|332796030|ref|YP_004457530.1|	-	0.0008	18.9	0.0	0.0018	17.7	0.0	1.5	2	0	0	2	2	1	1	FtsK/SpoIIIE	family
DUF258	PF03193.11	gi|332796030|ref|YP_004457530.1|	-	0.00096	18.3	0.4	0.0019	17.4	0.0	1.6	2	0	0	2	2	1	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|332796030|ref|YP_004457530.1|	-	0.0013	19.0	0.1	0.0081	16.4	0.0	2.0	1	1	1	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|332796030|ref|YP_004457530.1|	-	0.0016	17.8	0.3	0.15	11.4	0.0	2.4	2	1	0	2	2	2	1	IstB-like	ATP	binding	protein
NB-ARC	PF00931.17	gi|332796030|ref|YP_004457530.1|	-	0.0017	17.2	0.6	0.0063	15.4	0.4	1.9	1	1	0	1	1	1	1	NB-ARC	domain
MobB	PF03205.9	gi|332796030|ref|YP_004457530.1|	-	0.0027	17.3	0.2	0.018	14.7	0.1	2.2	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|332796030|ref|YP_004457530.1|	-	0.0034	18.1	0.2	0.006	17.3	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
DUF87	PF01935.12	gi|332796030|ref|YP_004457530.1|	-	0.0037	17.1	0.5	0.016	15.0	0.0	2.1	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
RNA_helicase	PF00910.17	gi|332796030|ref|YP_004457530.1|	-	0.0055	16.8	0.0	0.014	15.5	0.0	1.8	1	0	0	1	1	1	1	RNA	helicase
NACHT	PF05729.7	gi|332796030|ref|YP_004457530.1|	-	0.0057	16.3	0.0	0.01	15.5	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
UPF0079	PF02367.12	gi|332796030|ref|YP_004457530.1|	-	0.0075	15.9	0.0	0.017	14.7	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|332796030|ref|YP_004457530.1|	-	0.013	14.4	1.4	0.091	11.6	0.1	2.2	1	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_5	PF07728.9	gi|332796030|ref|YP_004457530.1|	-	0.02	14.6	0.0	0.044	13.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1	PF01926.18	gi|332796030|ref|YP_004457530.1|	-	0.022	14.7	0.2	0.049	13.5	0.1	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Arch_ATPase	PF01637.13	gi|332796030|ref|YP_004457530.1|	-	0.023	14.4	1.5	0.059	13.0	1.0	1.8	1	1	0	1	1	1	0	Archaeal	ATPase
Zot	PF05707.7	gi|332796030|ref|YP_004457530.1|	-	0.026	13.9	0.1	3.7	6.9	0.0	2.3	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
Zeta_toxin	PF06414.7	gi|332796030|ref|YP_004457530.1|	-	0.028	13.5	0.3	0.98	8.4	0.0	2.3	2	0	0	2	2	2	0	Zeta	toxin
ABC_ATPase	PF09818.4	gi|332796030|ref|YP_004457530.1|	-	0.028	13.0	0.7	0.75	8.3	0.0	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_14	PF13173.1	gi|332796030|ref|YP_004457530.1|	-	0.062	13.2	0.1	0.13	12.1	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|332796030|ref|YP_004457530.1|	-	0.068	13.0	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|332796030|ref|YP_004457530.1|	-	0.068	12.6	0.1	0.25	10.8	0.0	1.9	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|332796030|ref|YP_004457530.1|	-	0.068	12.9	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
SbcCD_C	PF13558.1	gi|332796030|ref|YP_004457530.1|	-	0.079	12.8	0.1	0.26	11.2	0.1	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NTPase_1	PF03266.10	gi|332796030|ref|YP_004457530.1|	-	0.097	12.3	0.3	1	9.0	0.0	2.2	2	0	0	2	2	2	0	NTPase
Torsin	PF06309.6	gi|332796030|ref|YP_004457530.1|	-	0.1	12.5	0.0	1.1	9.1	0.0	2.2	2	0	0	2	2	2	0	Torsin
AAA_30	PF13604.1	gi|332796030|ref|YP_004457530.1|	-	0.18	11.3	0.0	0.58	9.6	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_13	PF13166.1	gi|332796030|ref|YP_004457530.1|	-	0.51	8.7	9.0	0.66	8.3	1.2	2.8	2	1	1	3	3	3	0	AAA	domain
BPD_transp_1	PF00528.17	gi|332796031|ref|YP_004457531.1|	-	1.2e-34	119.4	7.1	1.2e-34	119.4	4.9	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|332796031|ref|YP_004457531.1|	-	10	5.6	8.2	10	5.5	0.3	2.5	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF871	PF05913.6	gi|332796032|ref|YP_004457532.1|	-	1.5e-70	237.7	0.1	1.9e-70	237.5	0.1	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF871)
SBP_bac_5	PF00496.17	gi|332796033|ref|YP_004457533.1|	-	3.3e-38	131.4	0.0	5e-38	130.9	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
EutB	PF06751.6	gi|332796033|ref|YP_004457533.1|	-	0.12	10.6	0.0	0.19	10.0	0.0	1.2	1	0	0	1	1	1	0	Ethanolamine	ammonia	lyase	large	subunit	(EutB)
DUF608	PF04685.8	gi|332796035|ref|YP_004457535.1|	-	7.3e-84	281.5	0.1	1e-83	281.0	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|332796035|ref|YP_004457535.1|	-	3.2e-48	164.4	0.0	5.6e-48	163.6	0.0	1.4	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
GDE_C	PF06202.9	gi|332796035|ref|YP_004457535.1|	-	0.022	13.4	0.0	0.039	12.6	0.0	1.4	1	0	0	1	1	1	0	Amylo-alpha-1,6-glucosidase
DUF1887	PF09002.6	gi|332796035|ref|YP_004457535.1|	-	0.18	10.1	0.0	0.8	8.0	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1887)
Raffinose_syn	PF05691.7	gi|332796036|ref|YP_004457536.1|	-	3.9e-40	137.1	3.5	1.3e-19	69.3	0.1	3.1	2	1	1	3	3	3	3	Raffinose	synthase	or	seed	imbibition	protein	Sip1
Melibiase	PF02065.13	gi|332796036|ref|YP_004457536.1|	-	3.7e-07	29.1	0.2	6e-07	28.4	0.2	1.3	1	0	0	1	1	1	1	Melibiase
Glyco_hydro_31	PF01055.21	gi|332796036|ref|YP_004457536.1|	-	0.042	12.6	0.0	0.062	12.1	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	31
TM_helix	PF05552.7	gi|332796037|ref|YP_004457537.1|	-	0.15	11.7	4.4	0.34	10.5	3.1	1.7	1	0	0	1	1	1	0	Conserved	TM	helix
DUF872	PF05915.7	gi|332796037|ref|YP_004457537.1|	-	0.44	10.4	3.1	0.42	10.4	0.2	2.2	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
Acetyltransf_1	PF00583.19	gi|332796038|ref|YP_004457538.1|	-	1.5e-12	47.3	0.0	2.8e-12	46.5	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|332796038|ref|YP_004457538.1|	-	5.9e-11	42.7	0.0	7.2e-11	42.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|332796038|ref|YP_004457538.1|	-	1.9e-08	34.4	0.1	3.3e-08	33.6	0.1	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|332796038|ref|YP_004457538.1|	-	1.4e-05	25.1	0.0	1.8e-05	24.8	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|332796038|ref|YP_004457538.1|	-	1.6e-05	24.9	0.0	6.3e-05	23.0	0.0	2.0	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|332796038|ref|YP_004457538.1|	-	0.0002	21.0	0.0	0.00034	20.3	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.1	gi|332796038|ref|YP_004457538.1|	-	0.00022	21.1	0.0	0.00033	20.5	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DrsE	PF02635.10	gi|332796039|ref|YP_004457539.1|	-	9.2e-07	28.9	0.1	1.1e-06	28.6	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
AGT	PF11440.3	gi|332796040|ref|YP_004457540.1|	-	0.043	12.6	0.0	0.051	12.4	0.0	1.1	1	0	0	1	1	1	0	DNA	alpha-glucosyltransferase
DUF4412	PF14371.1	gi|332796040|ref|YP_004457540.1|	-	0.08	13.4	0.1	0.15	12.5	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4412)
DUF4145	PF13643.1	gi|332796040|ref|YP_004457540.1|	-	0.081	12.7	0.1	0.12	12.2	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4145)
NdhO	PF11910.3	gi|332796041|ref|YP_004457541.1|	-	0.044	13.4	0.1	0.057	13.0	0.1	1.1	1	0	0	1	1	1	0	Cyanobacterial	and	plant	NDH-1	subunit	O
PIN	PF01850.16	gi|332796042|ref|YP_004457542.1|	-	8.4e-18	64.8	1.0	1e-17	64.5	0.7	1.0	1	0	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|332796042|ref|YP_004457542.1|	-	0.13	11.9	0.1	0.18	11.4	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
CcdA	PF07362.7	gi|332796043|ref|YP_004457543.1|	-	0.00034	20.4	0.1	0.00046	19.9	0.1	1.3	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RelB	PF04221.7	gi|332796043|ref|YP_004457543.1|	-	0.026	14.2	0.1	0.036	13.8	0.0	1.4	1	0	0	1	1	1	0	RelB	antitoxin
Prok-TraM	PF09228.5	gi|332796043|ref|YP_004457543.1|	-	0.41	10.8	2.2	2	8.6	1.5	1.9	1	1	0	1	1	1	0	Prokaryotic	Transcriptional	repressor	TraM
PIN	PF01850.16	gi|332796044|ref|YP_004457544.1|	-	8.3e-12	45.4	0.1	9.6e-12	45.3	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
DUF1682	PF07946.9	gi|332796044|ref|YP_004457544.1|	-	0.05	12.4	0.2	0.88	8.3	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1682)
Antitoxin-MazE	PF04014.13	gi|332796045|ref|YP_004457545.1|	-	0.00039	20.0	1.8	0.0012	18.5	1.2	1.8	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|332796045|ref|YP_004457545.1|	-	0.0053	16.4	0.1	0.0067	16.1	0.1	1.2	1	0	0	1	1	1	1	MraZ	protein
STN	PF07660.9	gi|332796045|ref|YP_004457545.1|	-	0.0079	15.7	0.2	1.6	8.3	0.1	2.2	2	0	0	2	2	2	2	Secretin	and	TonB	N	terminus	short	domain
GIIM	PF08388.6	gi|332796045|ref|YP_004457545.1|	-	0.099	12.4	0.0	0.13	12.0	0.0	1.1	1	0	0	1	1	1	0	Group	II	intron,	maturase-specific	domain
Cas_NE0113	PF09623.5	gi|332796046|ref|YP_004457546.1|	-	3.8e-05	23.2	0.1	0.00033	20.1	0.0	2.0	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|332796046|ref|YP_004457546.1|	-	0.081	11.5	0.0	0.093	11.3	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
Cas_Cas4	PF01930.12	gi|332796047|ref|YP_004457547.1|	-	1.6e-23	83.3	0.1	1.9e-23	83.1	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|332796047|ref|YP_004457547.1|	-	1.5e-08	34.3	0.1	1.6e-08	34.2	0.0	1.1	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_DxTHG	PF09455.5	gi|332796048|ref|YP_004457548.1|	-	5.5e-51	173.8	13.4	6.3e-51	173.7	9.3	1.0	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
DnaB	PF00772.16	gi|332796048|ref|YP_004457548.1|	-	0.012	15.5	0.2	0.028	14.2	0.1	1.6	1	0	0	1	1	1	0	DnaB-like	helicase	N	terminal	domain
DUF1241	PF06840.6	gi|332796050|ref|YP_004457550.1|	-	0.00064	19.0	3.6	0.0031	16.7	0.8	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1241)
RHH_1	PF01402.16	gi|332796050|ref|YP_004457550.1|	-	0.0036	17.1	1.6	0.0036	17.1	1.1	3.3	3	1	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
Pox_VLTF3	PF04947.9	gi|332796050|ref|YP_004457550.1|	-	0.015	14.8	3.2	0.016	14.7	2.2	1.1	1	0	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
CcdA	PF07362.7	gi|332796050|ref|YP_004457550.1|	-	0.016	15.0	2.7	0.016	15.0	1.9	1.4	1	1	1	2	2	2	0	Post-segregation	antitoxin	CcdA
ADPrib_exo_Tox	PF03496.9	gi|332796050|ref|YP_004457550.1|	-	0.019	14.1	1.5	0.02	14.1	1.0	1.0	1	0	0	1	1	1	0	ADP-ribosyltransferase	exoenzyme
ATP_bind_4	PF01902.12	gi|332796050|ref|YP_004457550.1|	-	0.063	12.6	2.0	0.081	12.2	1.4	1.2	1	0	0	1	1	1	0	ATP-binding	region
DUF2088	PF09861.4	gi|332796050|ref|YP_004457550.1|	-	0.08	11.9	1.9	0.084	11.8	1.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2088)
DUF4071	PF13281.1	gi|332796050|ref|YP_004457550.1|	-	0.092	11.5	0.7	0.094	11.5	0.5	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4071)
Imm42	PF15601.1	gi|332796050|ref|YP_004457550.1|	-	0.18	11.2	1.0	0.21	10.9	0.7	1.2	1	0	0	1	1	1	0	Immunity	protein	42
pRN1_helical	PF13010.1	gi|332796050|ref|YP_004457550.1|	-	0.29	10.7	3.9	0.33	10.5	2.7	1.1	1	0	0	1	1	1	0	Primase	helical	domain
Uteroglobin	PF01099.12	gi|332796050|ref|YP_004457550.1|	-	0.43	10.4	3.8	0.69	9.7	2.7	1.4	1	1	0	1	1	1	0	Uteroglobin	family
DUF3987	PF13148.1	gi|332796050|ref|YP_004457550.1|	-	1.1	7.7	4.1	1	7.8	2.9	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
ATP-synt_E	PF05680.7	gi|332796050|ref|YP_004457550.1|	-	1.5	8.8	5.1	1.9	8.5	3.5	1.2	1	0	0	1	1	1	0	ATP	synthase	E	chain
Kri1	PF05178.7	gi|332796050|ref|YP_004457550.1|	-	6.4	7.1	9.3	9.1	6.6	6.4	1.4	1	1	0	1	1	1	0	KRI1-like	family
PIN	PF01850.16	gi|332796051|ref|YP_004457551.1|	-	7.7e-06	26.2	0.2	1.2e-05	25.6	0.1	1.4	1	1	0	1	1	1	1	PIN	domain
HD	PF01966.17	gi|332796052|ref|YP_004457552.1|	-	1.6e-08	34.5	0.5	6.5e-08	32.6	0.2	2.3	2	1	0	2	2	2	1	HD	domain
RAMPs	PF03787.10	gi|332796053|ref|YP_004457553.1|	-	2.9e-09	37.0	3.3	1e-08	35.3	2.3	1.8	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|332796054|ref|YP_004457554.1|	-	0.0047	16.7	11.6	0.0067	16.2	4.8	3.1	2	1	0	2	2	2	1	RAMP	superfamily
RAMPs	PF03787.10	gi|332796056|ref|YP_004457556.1|	-	9e-20	71.4	2.1	1.6e-19	70.5	1.4	1.5	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|332796057|ref|YP_004457557.1|	-	5.6e-16	59.0	0.9	5.6e-16	59.0	0.6	2.1	2	1	0	2	2	2	1	RAMP	superfamily
RAMPs	PF03787.10	gi|332796058|ref|YP_004457558.1|	-	1.5e-11	44.5	0.6	3e-11	43.5	0.4	1.6	1	1	0	1	1	1	1	RAMP	superfamily
DUF1451	PF07295.6	gi|332796059|ref|YP_004457559.1|	-	0.059	13.1	0.1	0.066	12.9	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
SopA	PF13981.1	gi|332796059|ref|YP_004457559.1|	-	0.06	13.3	0.6	0.07	13.1	0.4	1.0	1	0	0	1	1	1	0	SopA-like	central	domain
DUF911	PF06023.7	gi|332796061|ref|YP_004457561.1|	-	8.3e-104	346.8	0.0	9.8e-104	346.6	0.0	1.0	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF911)
Cas_Cas4	PF01930.12	gi|332796061|ref|YP_004457561.1|	-	1.3e-11	44.7	0.3	4.3e-06	26.7	0.0	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|332796061|ref|YP_004457561.1|	-	2e-08	33.9	0.1	2.5e-08	33.6	0.1	1.1	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
RAP	PF08373.5	gi|332796061|ref|YP_004457561.1|	-	0.047	13.4	1.0	0.2	11.4	0.7	2.2	1	1	0	1	1	1	0	RAP	domain
Rsa3	PF14615.1	gi|332796063|ref|YP_004457563.1|	-	0.035	13.3	0.1	0.056	12.7	0.1	1.3	1	0	0	1	1	1	0	Ribosome-assembly	protein	3
DUF4179	PF13786.1	gi|332796063|ref|YP_004457563.1|	-	0.048	13.8	0.0	0.053	13.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4179)
RPAP3_C	PF13877.1	gi|332796063|ref|YP_004457563.1|	-	0.073	13.0	0.1	0.095	12.6	0.1	1.1	1	0	0	1	1	1	0	Potential	Monad-binding	region	of	RPAP3
PIN	PF01850.16	gi|332796064|ref|YP_004457564.1|	-	4.6e-08	33.4	1.2	1.8e-07	31.4	0.8	1.9	1	1	0	1	1	1	1	PIN	domain
Matrilin_ccoil	PF10393.4	gi|332796065|ref|YP_004457565.1|	-	1.1e-06	27.9	7.6	0.11	11.9	0.3	4.5	3	1	1	4	4	4	2	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
DUF1664	PF07889.7	gi|332796065|ref|YP_004457565.1|	-	5e-05	23.1	18.4	0.0001	22.1	7.1	3.3	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF1664)
Baculo_PEP_C	PF04513.7	gi|332796065|ref|YP_004457565.1|	-	0.00016	21.4	4.9	0.0024	17.7	1.9	2.6	2	1	0	2	2	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Apolipoprotein	PF01442.13	gi|332796065|ref|YP_004457565.1|	-	0.00025	20.6	4.0	0.0011	18.5	2.8	2.0	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DUF3584	PF12128.3	gi|332796065|ref|YP_004457565.1|	-	0.0004	17.8	4.2	0.00046	17.7	2.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
NPV_P10	PF05531.7	gi|332796065|ref|YP_004457565.1|	-	0.00063	19.9	19.5	0.055	13.7	8.3	4.5	3	1	1	4	4	3	1	Nucleopolyhedrovirus	P10	protein
ERM	PF00769.14	gi|332796065|ref|YP_004457565.1|	-	0.0039	16.7	5.8	0.0072	15.8	4.0	1.4	1	0	0	1	1	1	1	Ezrin/radixin/moesin	family
Bacillus_HBL	PF05791.6	gi|332796065|ref|YP_004457565.1|	-	0.0044	16.4	7.7	0.015	14.6	4.8	2.1	1	1	1	2	2	2	2	Bacillus	haemolytic	enterotoxin	(HBL)
FliD_C	PF07195.7	gi|332796065|ref|YP_004457565.1|	-	0.0048	16.2	4.6	0.012	14.8	2.0	2.3	1	1	1	2	2	2	1	Flagellar	hook-associated	protein	2	C-terminus
DUF4164	PF13747.1	gi|332796065|ref|YP_004457565.1|	-	0.0048	16.9	6.7	0.12	12.5	0.6	2.6	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4164)
TBPIP	PF07106.8	gi|332796065|ref|YP_004457565.1|	-	0.0063	16.0	11.4	0.0063	16.0	7.9	2.2	3	1	1	4	4	2	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
FTA4	PF13093.1	gi|332796065|ref|YP_004457565.1|	-	0.0084	15.5	2.3	0.012	15.0	1.6	1.2	1	0	0	1	1	1	1	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
Fib_alpha	PF08702.5	gi|332796065|ref|YP_004457565.1|	-	0.011	15.8	10.6	0.031	14.4	6.8	2.1	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
FlxA	PF14282.1	gi|332796065|ref|YP_004457565.1|	-	0.011	15.6	3.5	0.078	12.9	2.1	2.4	1	1	1	2	2	2	0	FlxA-like	protein
Tweety	PF04906.8	gi|332796065|ref|YP_004457565.1|	-	0.013	13.8	3.9	0.015	13.6	2.0	1.5	1	1	0	1	1	1	0	Tweety
MitMem_reg	PF13012.1	gi|332796065|ref|YP_004457565.1|	-	0.016	15.2	6.3	0.37	10.8	0.7	2.6	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
Syntaxin	PF00804.20	gi|332796065|ref|YP_004457565.1|	-	0.022	14.9	16.0	0.032	14.3	2.3	3.2	3	1	1	4	4	2	0	Syntaxin
DUF948	PF06103.6	gi|332796065|ref|YP_004457565.1|	-	0.022	14.5	5.0	0.022	14.5	3.4	3.2	1	1	3	4	4	3	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF148	PF02520.12	gi|332796065|ref|YP_004457565.1|	-	0.023	14.4	4.9	0.071	12.9	3.4	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF148
DUF4631	PF15450.1	gi|332796065|ref|YP_004457565.1|	-	0.028	12.7	12.2	0.15	10.2	7.6	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4631)
Prefoldin_2	PF01920.15	gi|332796065|ref|YP_004457565.1|	-	0.028	14.1	3.6	0.028	14.1	2.5	3.6	2	1	1	3	3	2	0	Prefoldin	subunit
Ax_dynein_light	PF10211.4	gi|332796065|ref|YP_004457565.1|	-	0.039	13.7	10.2	1.8	8.4	3.1	2.4	1	1	1	2	2	2	0	Axonemal	dynein	light	chain
Vac_Fusion	PF02346.11	gi|332796065|ref|YP_004457565.1|	-	0.049	13.0	7.6	3	7.3	0.4	3.9	1	1	3	4	4	4	0	Chordopoxvirus	fusion	protein
Filament	PF00038.16	gi|332796065|ref|YP_004457565.1|	-	0.052	13.0	10.7	0.043	13.2	2.1	2.2	1	1	1	2	2	2	0	Intermediate	filament	protein
DUF4455	PF14643.1	gi|332796065|ref|YP_004457565.1|	-	0.057	12.0	8.6	0.024	13.3	4.3	1.6	2	1	0	2	2	1	0	Domain	of	unknown	function	(DUF4455)
CAML	PF14963.1	gi|332796065|ref|YP_004457565.1|	-	0.067	12.5	2.1	0.1	11.9	1.5	1.2	1	0	0	1	1	1	0	Calcium	signal-modulating	cyclophilin	ligand
Atg14	PF10186.4	gi|332796065|ref|YP_004457565.1|	-	0.077	11.9	7.0	0.12	11.2	4.7	1.4	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
GAS	PF13851.1	gi|332796065|ref|YP_004457565.1|	-	0.079	12.1	14.7	0.019	14.1	7.2	2.1	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
ApoO	PF09769.4	gi|332796065|ref|YP_004457565.1|	-	0.095	12.4	0.7	0.48	10.1	0.2	2.3	1	1	2	3	3	3	0	Apolipoprotein	O
DUF2317	PF10079.4	gi|332796065|ref|YP_004457565.1|	-	0.1	11.1	3.9	0.14	10.7	2.7	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2317)
L31	PF09784.4	gi|332796065|ref|YP_004457565.1|	-	0.1	12.6	8.1	2.3	8.3	0.5	2.7	1	1	1	2	2	2	0	Mitochondrial	ribosomal	protein	L31
LUC7	PF03194.10	gi|332796065|ref|YP_004457565.1|	-	0.13	11.7	15.6	4.9	6.6	10.3	2.4	1	1	0	1	1	1	0	LUC7	N_terminus
Sipho_Gp157	PF05565.6	gi|332796065|ref|YP_004457565.1|	-	0.14	11.7	16.8	0.039	13.5	6.7	3.0	1	1	2	3	3	3	0	Siphovirus	Gp157
Reo_sigmaC	PF04582.7	gi|332796065|ref|YP_004457565.1|	-	0.15	11.2	0.5	0.19	10.8	0.3	1.3	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
End3	PF12761.2	gi|332796065|ref|YP_004457565.1|	-	0.17	11.4	8.1	0.26	10.9	5.0	1.6	1	1	0	1	1	1	0	Actin	cytoskeleton-regulatory	complex	protein	END3
DUF972	PF06156.8	gi|332796065|ref|YP_004457565.1|	-	0.17	12.2	12.3	0.34	11.2	1.7	2.9	1	1	2	3	3	2	0	Protein	of	unknown	function	(DUF972)
GldM_N	PF12081.3	gi|332796065|ref|YP_004457565.1|	-	0.19	11.2	11.5	0.053	13.0	5.7	1.7	2	0	0	2	2	1	0	GldM	N-terminal	domain
DUF1110	PF06533.7	gi|332796065|ref|YP_004457565.1|	-	0.21	11.4	1.9	0.9	9.3	0.4	2.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1110)
Spectrin	PF00435.16	gi|332796065|ref|YP_004457565.1|	-	0.22	11.8	7.5	0.063	13.5	1.7	2.6	2	1	1	3	3	2	0	Spectrin	repeat
DUF4143	PF13635.1	gi|332796065|ref|YP_004457565.1|	-	0.23	11.6	5.9	0.33	11.1	4.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
Syntaxin-6_N	PF09177.6	gi|332796065|ref|YP_004457565.1|	-	0.24	11.8	10.6	0.11	12.9	2.9	2.7	2	1	1	3	3	2	0	Syntaxin	6,	N-terminal
COG5	PF10392.4	gi|332796065|ref|YP_004457565.1|	-	0.24	11.3	2.7	1.3	9.0	0.2	2.4	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
Prominin	PF05478.6	gi|332796065|ref|YP_004457565.1|	-	0.28	8.6	6.9	0.045	11.3	2.5	1.5	2	0	0	2	2	2	0	Prominin
Mitofilin	PF09731.4	gi|332796065|ref|YP_004457565.1|	-	0.29	9.7	12.8	0.39	9.3	8.9	1.2	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
HAUS-augmin3	PF14932.1	gi|332796065|ref|YP_004457565.1|	-	0.35	10.0	6.6	0.28	10.3	3.1	1.8	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
BRI3BP	PF14965.1	gi|332796065|ref|YP_004457565.1|	-	0.39	10.0	2.7	11	5.3	0.5	3.0	1	1	1	2	2	2	0	Negative	regulator	of	p53/TP53
Tektin	PF03148.9	gi|332796065|ref|YP_004457565.1|	-	0.43	9.0	10.7	0.73	8.3	7.4	1.3	1	0	0	1	1	1	0	Tektin	family
Allexi_40kDa	PF05549.6	gi|332796065|ref|YP_004457565.1|	-	0.51	9.5	3.3	0.86	8.8	2.0	1.6	1	1	0	1	1	1	0	Allexivirus	40kDa	protein
IncA	PF04156.9	gi|332796065|ref|YP_004457565.1|	-	0.55	9.7	5.0	1.4	8.4	3.5	1.8	1	1	0	1	1	1	0	IncA	protein
DUF1451	PF07295.6	gi|332796065|ref|YP_004457565.1|	-	0.75	9.5	8.1	0.36	10.5	2.0	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1451)
LPP	PF04728.8	gi|332796065|ref|YP_004457565.1|	-	0.98	9.2	16.9	5.4	6.8	1.6	5.2	3	1	2	5	5	4	0	Lipoprotein	leucine-zipper
TMF_TATA_bd	PF12325.3	gi|332796065|ref|YP_004457565.1|	-	1.2	8.9	13.9	0.88	9.3	7.5	2.4	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
TPR_MLP1_2	PF07926.7	gi|332796065|ref|YP_004457565.1|	-	1.3	8.8	11.4	10	5.8	6.2	2.7	2	1	0	2	2	1	0	TPR/MLP1/MLP2-like	protein
COG2	PF06148.6	gi|332796065|ref|YP_004457565.1|	-	1.3	8.8	13.7	24	4.8	7.8	3.2	1	1	2	3	3	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF3552	PF12072.3	gi|332796065|ref|YP_004457565.1|	-	1.7	7.8	18.5	0.36	10.0	5.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3552)
LXG	PF04740.7	gi|332796065|ref|YP_004457565.1|	-	2.6	7.7	11.1	0.45	10.2	4.3	2.1	2	1	0	2	2	1	0	LXG	domain	of	WXG	superfamily
CK2S	PF15011.1	gi|332796065|ref|YP_004457565.1|	-	2.8	7.7	6.2	0.58	9.9	1.5	2.0	2	1	0	2	2	1	0	Casein	Kinase	2	substrate
Tropomyosin_1	PF12718.2	gi|332796065|ref|YP_004457565.1|	-	3	7.6	20.5	1.7e+02	1.9	14.3	3.1	1	1	0	1	1	1	0	Tropomyosin	like
V_ATPase_I	PF01496.14	gi|332796065|ref|YP_004457565.1|	-	3.2	5.4	11.0	1.9	6.2	6.3	1.4	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
KMP11	PF03037.11	gi|332796065|ref|YP_004457565.1|	-	3.2	8.4	5.6	1.3	9.6	1.5	2.2	2	1	0	2	2	1	0	Kinetoplastid	membrane	protein	11
ACCA	PF03255.9	gi|332796065|ref|YP_004457565.1|	-	3.8	7.0	11.2	1	8.9	2.8	2.9	1	1	3	4	4	3	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
APG6	PF04111.7	gi|332796065|ref|YP_004457565.1|	-	3.9	6.4	11.3	3.6	6.5	5.5	1.9	1	1	1	2	2	2	0	Autophagy	protein	Apg6
Spc7	PF08317.6	gi|332796065|ref|YP_004457565.1|	-	4.2	5.9	16.6	6.1	5.4	11.2	1.7	1	1	0	1	1	1	0	Spc7	kinetochore	protein
Fzo_mitofusin	PF04799.8	gi|332796065|ref|YP_004457565.1|	-	4.3	6.6	12.0	0.46	9.8	3.5	2.8	3	1	1	4	4	2	0	fzo-like	conserved	region
TACC	PF05010.9	gi|332796065|ref|YP_004457565.1|	-	5.7	6.6	14.6	2.1	8.0	8.5	1.6	2	1	0	2	2	1	0	Transforming	acidic	coiled-coil-containing	protein	(TACC)
Cortex-I_coil	PF09304.5	gi|332796065|ref|YP_004457565.1|	-	6.6	6.8	13.1	18	5.3	7.1	2.8	1	1	0	1	1	1	0	Cortexillin	I,	coiled	coil
DASH_Duo1	PF08651.5	gi|332796065|ref|YP_004457565.1|	-	7.7	6.1	9.2	11	5.6	0.1	3.1	3	1	1	4	4	2	0	DASH	complex	subunit	Duo1
CRISPR_Cas2	PF09827.4	gi|332796066|ref|YP_004457566.1|	-	5.8e-17	61.6	0.1	7.2e-17	61.3	0.1	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.11	gi|332796067|ref|YP_004457567.1|	-	4e-60	203.3	0.0	4.7e-60	203.0	0.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
Methyltrn_RNA_4	PF09936.4	gi|332796067|ref|YP_004457567.1|	-	0.13	11.7	0.0	0.21	11.1	0.0	1.2	1	0	0	1	1	1	0	SAM-dependent	RNA	methyltransferase
DUF2276	PF10040.4	gi|332796068|ref|YP_004457568.1|	-	7e-30	103.7	0.2	1.2e-29	102.9	0.2	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
DUF1765	PF08578.5	gi|332796068|ref|YP_004457568.1|	-	0.012	15.6	0.1	0.024	14.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1765)
RAMPs	PF03787.10	gi|332796068|ref|YP_004457568.1|	-	0.018	14.8	0.5	0.031	14.1	0.4	1.6	1	1	0	1	1	1	0	RAMP	superfamily
Cas_Cas6	PF01881.11	gi|332796068|ref|YP_004457568.1|	-	0.24	11.6	2.8	1	9.5	1.9	2.1	1	1	0	1	1	1	0	CRISPR	associated	protein	Cas6
AAA_14	PF13173.1	gi|332796069|ref|YP_004457569.1|	-	1.3e-13	50.9	0.2	9.5e-13	48.1	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|332796069|ref|YP_004457569.1|	-	9.2e-10	38.5	1.9	1.3e-09	38.0	1.2	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
GerE	PF00196.14	gi|332796069|ref|YP_004457569.1|	-	0.0067	15.7	0.0	0.019	14.2	0.0	1.8	1	1	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_24	PF13412.1	gi|332796069|ref|YP_004457569.1|	-	0.01	15.2	0.0	0.022	14.1	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|332796069|ref|YP_004457569.1|	-	0.033	14.0	0.4	1.5	8.7	0.1	2.7	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_10	PF04967.7	gi|332796069|ref|YP_004457569.1|	-	0.041	13.4	0.0	0.11	12.1	0.0	1.6	1	0	0	1	1	1	0	HTH	DNA	binding	domain
DUF3221	PF11518.3	gi|332796069|ref|YP_004457569.1|	-	0.044	13.4	1.0	0.11	12.2	0.7	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3221)
HTH_11	PF08279.7	gi|332796069|ref|YP_004457569.1|	-	0.049	13.2	0.0	0.092	12.4	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
HTH_36	PF13730.1	gi|332796069|ref|YP_004457569.1|	-	0.056	13.5	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
zf-CCHC_6	PF15288.1	gi|332796070|ref|YP_004457570.1|	-	0.1	12.2	0.0	0.14	11.8	0.0	1.3	1	0	0	1	1	1	0	Zinc	knuckle
HTH_AsnC-type	PF13404.1	gi|332796071|ref|YP_004457571.1|	-	0.006	16.0	0.1	0.012	15.1	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|332796071|ref|YP_004457571.1|	-	0.053	12.9	0.9	1.2	8.5	0.0	2.9	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
Arch_ATPase	PF01637.13	gi|332796072|ref|YP_004457572.1|	-	1.3e-27	96.9	4.1	2.5e-27	96.0	2.9	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|332796072|ref|YP_004457572.1|	-	5.5e-11	42.4	0.7	3.4e-05	23.7	0.1	2.5	1	1	1	2	2	2	2	AAA	domain
TrmB	PF01978.14	gi|332796072|ref|YP_004457572.1|	-	4.6e-06	26.2	0.3	1.5e-05	24.6	0.0	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
AAA_22	PF13401.1	gi|332796072|ref|YP_004457572.1|	-	7.9e-05	22.8	0.0	0.00021	21.4	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|332796072|ref|YP_004457572.1|	-	0.0012	18.8	0.0	0.0034	17.3	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF4423	PF14394.1	gi|332796072|ref|YP_004457572.1|	-	0.0044	16.5	0.0	0.013	15.0	0.0	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
AAA	PF00004.24	gi|332796072|ref|YP_004457572.1|	-	0.0049	17.0	0.2	0.19	11.9	0.1	3.0	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PadR	PF03551.9	gi|332796072|ref|YP_004457572.1|	-	0.018	14.7	0.0	0.041	13.6	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
AAA_17	PF13207.1	gi|332796072|ref|YP_004457572.1|	-	0.063	14.0	0.2	0.37	11.6	0.1	2.4	1	1	0	1	1	1	0	AAA	domain
Post_transc_reg	PF13797.1	gi|332796073|ref|YP_004457573.1|	-	0.0045	16.5	1.8	0.0056	16.2	0.6	1.6	2	0	0	2	2	2	1	Post-transcriptional	regulator
Ldh_2	PF02615.9	gi|332796074|ref|YP_004457574.1|	-	4.2e-06	25.7	0.0	4.5e-06	25.6	0.0	1.1	1	0	0	1	1	1	1	Malate/L-lactate	dehydrogenase
ABC_membrane	PF00664.18	gi|332796075|ref|YP_004457575.1|	-	3.5e-35	121.7	13.0	4.5e-35	121.3	9.0	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|332796075|ref|YP_004457575.1|	-	2.9e-33	115.0	0.0	6.2e-33	114.0	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
DUF1854	PF08909.6	gi|332796075|ref|YP_004457575.1|	-	2.9e-22	78.7	0.1	6.1e-22	77.6	0.1	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1854)
SMC_N	PF02463.14	gi|332796075|ref|YP_004457575.1|	-	2.4e-06	26.9	1.0	0.0007	18.8	0.0	2.6	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|332796075|ref|YP_004457575.1|	-	6.6e-05	23.7	1.6	0.00021	22.0	0.3	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_21	PF13304.1	gi|332796075|ref|YP_004457575.1|	-	0.00015	21.8	0.2	0.0067	16.4	0.0	4.4	4	0	0	4	4	4	2	AAA	domain
DUF87	PF01935.12	gi|332796075|ref|YP_004457575.1|	-	0.00047	20.0	0.1	0.0013	18.6	0.1	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_29	PF13555.1	gi|332796075|ref|YP_004457575.1|	-	0.0014	18.0	0.1	0.0033	16.9	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|332796075|ref|YP_004457575.1|	-	0.0025	17.9	0.2	0.02	15.0	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796075|ref|YP_004457575.1|	-	0.0043	17.3	0.0	0.0043	17.3	0.0	2.9	3	0	0	3	3	3	1	AAA	domain
AAA_10	PF12846.2	gi|332796075|ref|YP_004457575.1|	-	0.0059	16.0	0.7	0.12	11.8	0.8	2.5	2	1	0	2	2	2	1	AAA-like	domain
DUF258	PF03193.11	gi|332796075|ref|YP_004457575.1|	-	0.0089	15.2	0.2	0.025	13.7	0.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|332796075|ref|YP_004457575.1|	-	0.01	15.2	0.0	0.18	11.1	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|332796075|ref|YP_004457575.1|	-	0.017	14.8	0.0	0.62	9.8	0.0	2.7	3	0	0	3	3	3	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|332796075|ref|YP_004457575.1|	-	0.025	14.5	0.0	0.049	13.6	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Miro	PF08477.8	gi|332796075|ref|YP_004457575.1|	-	0.026	15.0	0.0	0.15	12.5	0.0	2.4	1	0	0	1	1	1	0	Miro-like	protein
bPH_3	PF14470.1	gi|332796075|ref|YP_004457575.1|	-	0.032	14.4	2.4	0.12	12.6	0.0	3.1	3	0	0	3	3	3	0	Bacterial	PH	domain
FtsK_SpoIIIE	PF01580.13	gi|332796075|ref|YP_004457575.1|	-	0.033	13.6	0.1	0.073	12.5	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
MobB	PF03205.9	gi|332796075|ref|YP_004457575.1|	-	0.038	13.6	0.1	0.12	12.1	0.1	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF815	PF05673.8	gi|332796075|ref|YP_004457575.1|	-	0.045	12.6	0.0	0.08	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_5	PF07728.9	gi|332796075|ref|YP_004457575.1|	-	0.066	12.9	0.1	0.73	9.5	0.0	2.7	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
ATP-synt_ab	PF00006.20	gi|332796075|ref|YP_004457575.1|	-	0.073	12.5	0.0	0.16	11.4	0.0	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_30	PF13604.1	gi|332796075|ref|YP_004457575.1|	-	0.073	12.6	0.0	1.2	8.7	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|332796075|ref|YP_004457575.1|	-	0.074	13.0	0.6	0.5	10.3	0.0	2.5	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_33	PF13671.1	gi|332796075|ref|YP_004457575.1|	-	0.2	11.5	0.0	0.5	10.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Peptidase_M20	PF01546.23	gi|332796076|ref|YP_004457576.1|	-	3.3e-26	91.9	0.0	4.8e-26	91.4	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|332796076|ref|YP_004457576.1|	-	3.1e-17	62.3	0.0	5.6e-17	61.4	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Coagulase	PF08764.5	gi|332796076|ref|YP_004457576.1|	-	0.042	13.7	0.1	0.086	12.7	0.1	1.4	1	0	0	1	1	1	0	Staphylococcus	aureus	coagulase
Prenyltransf	PF01255.14	gi|332796076|ref|YP_004457576.1|	-	0.078	12.0	0.0	0.16	11.1	0.0	1.5	1	0	0	1	1	1	0	Putative	undecaprenyl	diphosphate	synthase
DUF3139	PF11337.3	gi|332796077|ref|YP_004457577.1|	-	0.1	12.8	1.2	0.24	11.6	0.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
Sulfotransfer_1	PF00685.22	gi|332796078|ref|YP_004457578.1|	-	0.071	12.3	0.1	0.074	12.3	0.1	1.0	1	0	0	1	1	1	0	Sulfotransferase	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796079|ref|YP_004457579.1|	-	8.2e-23	79.8	1.9	1.8e-22	78.7	0.4	2.1	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332796079|ref|YP_004457579.1|	-	2.2e-08	33.7	1.6	2.2e-08	33.7	1.1	1.6	2	0	0	2	2	2	1	Probable	transposase
GLTP	PF08718.6	gi|332796079|ref|YP_004457579.1|	-	0.13	12.3	0.9	5.9	6.9	0.1	2.8	2	1	0	2	2	2	0	Glycolipid	transfer	protein	(GLTP)
zf-RING_4	PF14570.1	gi|332796079|ref|YP_004457579.1|	-	0.46	10.1	3.0	0.52	9.9	1.2	1.7	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
Antitoxin-MazE	PF04014.13	gi|332796080|ref|YP_004457580.1|	-	1.3e-12	47.0	3.1	2e-12	46.5	2.2	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|332796080|ref|YP_004457580.1|	-	1.2e-06	28.1	0.1	0.0001	22.0	0.0	2.2	1	1	1	2	2	2	1	MraZ	protein
AbrB-like	PF14250.1	gi|332796080|ref|YP_004457580.1|	-	0.0016	18.3	0.0	0.0021	17.9	0.0	1.2	1	0	0	1	1	1	1	AbrB-like	transcriptional	regulator
DUF104	PF01954.11	gi|332796080|ref|YP_004457580.1|	-	0.0024	17.8	4.6	0.0024	17.8	3.2	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF104
WG_beta_rep	PF14903.1	gi|332796080|ref|YP_004457580.1|	-	0.01	16.0	0.7	0.22	11.8	0.0	2.6	1	1	0	2	2	2	0	WG	containing	repeat
UFD1	PF03152.9	gi|332796080|ref|YP_004457580.1|	-	0.026	13.6	0.0	0.035	13.2	0.0	1.2	1	1	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
CTP-dep_RFKase	PF01982.11	gi|332796080|ref|YP_004457580.1|	-	0.048	13.2	0.5	0.083	12.5	0.1	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF120
DUF3553	PF12073.3	gi|332796080|ref|YP_004457580.1|	-	0.12	11.6	0.8	1.3	8.4	0.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3553)
PIN	PF01850.16	gi|332796081|ref|YP_004457581.1|	-	4.9e-16	59.1	0.1	5.5e-16	58.9	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796082|ref|YP_004457582.1|	-	0.061	12.9	0.1	0.92	9.2	0.0	2.6	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
Resolvase	PF00239.16	gi|332796083|ref|YP_004457583.1|	-	1.8e-08	34.3	0.2	2e-08	34.1	0.1	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
ANF_receptor	PF01094.23	gi|332796083|ref|YP_004457583.1|	-	0.12	11.0	0.0	0.18	10.5	0.0	1.3	1	1	0	1	1	1	0	Receptor	family	ligand	binding	region
MFS_1	PF07690.11	gi|332796084|ref|YP_004457584.1|	-	2.2e-21	75.9	45.0	9.7e-13	47.5	16.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332796084|ref|YP_004457584.1|	-	0.01	14.0	4.8	0.027	12.6	0.2	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
ATP-synt_S1	PF05827.7	gi|332796084|ref|YP_004457584.1|	-	0.44	9.8	3.2	0.25	10.6	0.5	1.8	2	0	0	2	2	2	0	Vacuolar	ATP	synthase	subunit	S1	(ATP6S1)
Antitoxin-MazE	PF04014.13	gi|332796085|ref|YP_004457585.1|	-	2.1e-12	46.4	1.2	3.1e-12	45.9	0.9	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF104	PF01954.11	gi|332796085|ref|YP_004457585.1|	-	0.00049	20.0	1.0	0.00072	19.5	0.1	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF104
AbrB-like	PF14250.1	gi|332796085|ref|YP_004457585.1|	-	0.0066	16.3	0.1	0.01	15.7	0.1	1.2	1	0	0	1	1	1	1	AbrB-like	transcriptional	regulator
CTP-dep_RFKase	PF01982.11	gi|332796085|ref|YP_004457585.1|	-	0.03	13.9	0.1	0.04	13.5	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF120
Rho_RNA_bind	PF07497.7	gi|332796085|ref|YP_004457585.1|	-	0.041	13.5	0.3	0.1	12.2	0.2	1.8	1	1	0	1	1	1	0	Rho	termination	factor,	RNA-binding	domain
CDC48_N	PF02359.13	gi|332796085|ref|YP_004457585.1|	-	0.073	13.0	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
PIN	PF01850.16	gi|332796086|ref|YP_004457586.1|	-	4.2e-16	59.3	0.6	4.8e-16	59.1	0.4	1.0	1	0	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|332796086|ref|YP_004457586.1|	-	0.011	15.3	0.4	0.046	13.4	0.3	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
Aspzincin_M35	PF14521.1	gi|332796086|ref|YP_004457586.1|	-	0.036	14.5	0.8	0.23	11.9	0.6	1.9	1	1	0	1	1	1	0	Lysine-specific	metallo-endopeptidase
ATP-sulfurylase	PF01747.12	gi|332796086|ref|YP_004457586.1|	-	0.067	12.4	0.1	0.092	12.0	0.1	1.1	1	0	0	1	1	1	0	ATP-sulfurylase
LAMTOR	PF15454.1	gi|332796087|ref|YP_004457587.1|	-	0.028	14.6	0.0	0.034	14.4	0.0	1.3	1	0	0	1	1	1	0	Late	endosomal/lysosomal	adaptor	and	MAPK	and	MTOR	activator
DNA_pol_B	PF00136.16	gi|332796088|ref|YP_004457588.1|	-	4.5e-19	68.5	1.7	8.4e-18	64.3	1.2	2.6	1	1	0	1	1	1	1	DNA	polymerase	family	B
HEAT_2	PF13646.1	gi|332796088|ref|YP_004457588.1|	-	0.036	14.3	0.0	0.11	12.8	0.0	1.7	1	0	0	1	1	1	0	HEAT	repeats
IFNGR1	PF07140.6	gi|332796088|ref|YP_004457588.1|	-	0.07	12.8	0.6	0.19	11.4	0.1	1.9	2	0	0	2	2	2	0	Interferon	gamma	receptor	(IFNGR1)
CSTF2_hinge	PF14327.1	gi|332796090|ref|YP_004457590.1|	-	0.035	14.1	0.2	0.035	14.1	0.1	1.5	2	0	0	2	2	2	0	Hinge	domain	of	cleavage	stimulation	factor	subunit	2
IL3	PF02059.10	gi|332796090|ref|YP_004457590.1|	-	0.06	13.3	0.0	0.079	12.9	0.0	1.2	1	0	0	1	1	1	0	Interleukin-3
zf-HYPF	PF07503.7	gi|332796090|ref|YP_004457590.1|	-	0.11	11.9	0.6	0.23	10.8	0.4	1.5	1	0	0	1	1	1	0	HypF	finger
S6PP_C	PF08472.5	gi|332796090|ref|YP_004457590.1|	-	0.12	11.9	0.0	0.18	11.4	0.0	1.2	1	0	0	1	1	1	0	Sucrose-6-phosphate	phosphohydrolase	C-terminal
XPC-binding	PF09280.6	gi|332796090|ref|YP_004457590.1|	-	0.19	11.2	1.2	1.1	8.7	0.0	2.3	2	0	0	2	2	2	0	XPC-binding	domain
OrfB_IS605	PF01385.14	gi|332796091|ref|YP_004457591.1|	-	2.1e-29	102.5	0.8	2.1e-29	102.5	0.6	1.6	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|332796091|ref|YP_004457591.1|	-	1.3e-22	79.2	0.7	2.9e-22	78.0	0.0	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|332796091|ref|YP_004457591.1|	-	0.14	12.0	0.4	0.25	11.1	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF2115	PF09888.4	gi|332796091|ref|YP_004457591.1|	-	2.4	8.2	6.7	0.71	9.9	0.1	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
zf-FPG_IleRS	PF06827.9	gi|332796091|ref|YP_004457591.1|	-	4.2	7.1	7.5	6.5	6.4	4.5	1.9	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Resolvase	PF00239.16	gi|332796092|ref|YP_004457592.1|	-	5.5e-14	52.2	0.2	7.9e-14	51.7	0.1	1.2	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|332796092|ref|YP_004457592.1|	-	1.9e-11	44.0	0.1	3.8e-11	43.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|332796092|ref|YP_004457592.1|	-	2.1e-10	40.2	0.3	6.9e-10	38.5	0.1	2.0	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|332796092|ref|YP_004457592.1|	-	3.4e-06	26.5	0.0	6.9e-06	25.5	0.0	1.6	1	0	0	1	1	1	1	MerR	family	regulatory	protein
MerR_2	PF13591.1	gi|332796092|ref|YP_004457592.1|	-	0.00028	20.4	0.9	0.0011	18.4	0.0	2.3	3	0	0	3	3	3	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|332796092|ref|YP_004457592.1|	-	0.0044	16.6	0.0	0.015	14.9	0.0	1.9	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_Mga	PF08280.6	gi|332796092|ref|YP_004457592.1|	-	0.0073	16.0	0.4	0.06	13.1	0.0	2.6	2	1	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_28	PF13518.1	gi|332796092|ref|YP_004457592.1|	-	0.033	14.1	0.0	0.093	12.7	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2779	PF11074.3	gi|332796092|ref|YP_004457592.1|	-	0.036	14.1	0.4	2.4	8.1	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function(DUF2779)
Sigma70_r4_2	PF08281.7	gi|332796092|ref|YP_004457592.1|	-	0.059	12.8	0.0	0.15	11.5	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
Borrelia_lipo_2	PF06238.6	gi|332796092|ref|YP_004457592.1|	-	0.075	13.0	2.1	0.13	12.3	0.6	2.0	1	1	1	2	2	2	0	Borrelia	burgdorferi	BBR25	lipoprotein
HTH_26	PF13443.1	gi|332796092|ref|YP_004457592.1|	-	0.11	12.6	0.1	6.3	7.0	0.0	2.5	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_22	PF13309.1	gi|332796092|ref|YP_004457592.1|	-	2	8.2	5.5	27	4.6	0.0	3.6	3	1	1	4	4	4	0	HTH	domain
PAT1	PF09770.4	gi|332796093|ref|YP_004457593.1|	-	5	5.2	20.9	6.1	4.9	14.5	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
PLDc_2	PF13091.1	gi|332796094|ref|YP_004457594.1|	-	1.2e-17	63.8	0.0	3.3e-09	36.5	0.0	2.5	2	1	0	2	2	2	2	PLD-like	domain
PLDc	PF00614.17	gi|332796094|ref|YP_004457594.1|	-	0.81	9.5	4.8	0.43	10.4	0.3	2.6	2	0	0	2	2	2	0	Phospholipase	D	Active	site	motif
EST1_DNA_bind	PF10373.4	gi|332796095|ref|YP_004457595.1|	-	0.12	11.5	0.0	0.13	11.4	0.0	1.1	1	0	0	1	1	1	0	Est1	DNA/RNA	binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796096|ref|YP_004457596.1|	-	1.4e-20	72.7	0.2	1.9e-20	72.3	0.2	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-RING_4	PF14570.1	gi|332796096|ref|YP_004457596.1|	-	0.0079	15.7	1.0	0.012	15.1	0.7	1.3	1	0	0	1	1	1	1	RING/Ubox	like	zinc-binding	domain
zf-ribbon_3	PF13248.1	gi|332796096|ref|YP_004457596.1|	-	0.031	13.4	1.1	0.38	10.0	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2HC_2	PF13913.1	gi|332796096|ref|YP_004457596.1|	-	0.052	13.2	0.3	0.052	13.2	0.2	1.8	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zinc_ribbon_2	PF13240.1	gi|332796096|ref|YP_004457596.1|	-	0.068	12.6	2.6	0.31	10.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Sgf11	PF08209.6	gi|332796096|ref|YP_004457596.1|	-	0.095	12.0	0.2	0.095	12.0	0.2	2.1	2	1	1	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
SEO_C	PF14577.1	gi|332796096|ref|YP_004457596.1|	-	0.14	11.5	1.3	0.16	11.2	0.9	1.3	1	1	0	1	1	1	0	Sieve	element	occlusion	C-terminus
MFS_1	PF07690.11	gi|332796097|ref|YP_004457597.1|	-	1.4e-24	86.5	47.1	1.4e-24	86.5	32.6	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332796097|ref|YP_004457597.1|	-	1.2e-12	47.2	41.7	6.3e-12	44.8	8.1	2.1	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|332796097|ref|YP_004457597.1|	-	2.5	6.4	43.6	0.46	8.8	24.1	2.6	1	1	1	2	2	2	0	MFS/sugar	transport	protein
Antitoxin-MazE	PF04014.13	gi|332796098|ref|YP_004457598.1|	-	5.1e-11	42.0	1.8	7.5e-11	41.5	1.2	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PIN	PF01850.16	gi|332796099|ref|YP_004457599.1|	-	4.4e-19	68.9	1.0	5e-19	68.7	0.7	1.0	1	0	0	1	1	1	1	PIN	domain
GATase	PF00117.23	gi|332796100|ref|YP_004457600.1|	-	6.7e-21	74.6	0.0	9e-21	74.1	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|332796100|ref|YP_004457600.1|	-	1.5e-05	24.5	0.1	7.6e-05	22.2	0.1	2.1	1	1	0	1	1	1	1	Peptidase	C26
DJ-1_PfpI	PF01965.19	gi|332796100|ref|YP_004457600.1|	-	0.04	13.3	0.0	0.059	12.8	0.0	1.3	1	0	0	1	1	1	0	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|332796100|ref|YP_004457600.1|	-	0.11	11.7	0.0	0.17	11.1	0.0	1.2	1	0	0	1	1	1	0	Putative	amidotransferase
Peptidase_M20	PF01546.23	gi|332796103|ref|YP_004457603.1|	-	5.3e-29	101.0	0.1	7.2e-29	100.6	0.1	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|332796103|ref|YP_004457603.1|	-	4.3e-13	48.9	0.0	8.8e-13	47.9	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Amidohydro_3	PF07969.6	gi|332796104|ref|YP_004457604.1|	-	2.6e-12	46.7	0.0	3.1e-12	46.4	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
CALCOCO1	PF07888.6	gi|332796105|ref|YP_004457605.1|	-	0.001	17.5	1.5	0.0011	17.3	1.0	1.0	1	0	0	1	1	1	1	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
MFS_1	PF07690.11	gi|332796106|ref|YP_004457606.1|	-	4e-22	78.4	55.1	4.2e-18	65.2	27.2	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF523	PF04463.7	gi|332796107|ref|YP_004457607.1|	-	3.8e-05	23.4	0.0	4.4e-05	23.2	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF523)
Transp_cyt_pur	PF02133.10	gi|332796108|ref|YP_004457608.1|	-	4.4e-63	213.3	46.8	6.6e-63	212.7	32.4	1.3	1	0	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
YtpI	PF14007.1	gi|332796109|ref|YP_004457609.1|	-	0.06	13.2	2.4	0.089	12.7	1.6	1.3	1	0	0	1	1	1	0	YtpI-like	protein
AAA_14	PF13173.1	gi|332796111|ref|YP_004457611.1|	-	2.3e-23	82.5	0.1	6e-23	81.1	0.1	1.7	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|332796111|ref|YP_004457611.1|	-	7.2e-10	38.9	0.5	1.8e-09	37.6	0.0	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|332796111|ref|YP_004457611.1|	-	7.4e-06	25.8	0.5	2.1e-05	24.3	0.1	2.0	2	0	0	2	2	2	1	Archaeal	ATPase
DUF2352	PF09817.4	gi|332796111|ref|YP_004457611.1|	-	0.0013	17.0	0.0	0.002	16.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2352)
RNA_helicase	PF00910.17	gi|332796111|ref|YP_004457611.1|	-	0.013	15.6	0.0	0.041	14.0	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
Poxvirus	PF06227.7	gi|332796111|ref|YP_004457611.1|	-	0.029	13.9	1.5	0.11	11.9	0.1	2.4	2	0	0	2	2	2	0	dsDNA	Poxvirus
Sec5	PF15469.1	gi|332796111|ref|YP_004457611.1|	-	0.097	12.3	2.4	0.09	12.5	0.2	2.0	2	0	0	2	2	2	0	Exocyst	complex	component	Sec5
AAA_16	PF13191.1	gi|332796111|ref|YP_004457611.1|	-	0.12	12.2	0.0	0.2	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
3H	PF02829.9	gi|332796112|ref|YP_004457612.1|	-	0.011	15.7	0.9	0.13	12.2	0.1	2.5	2	1	0	2	2	2	0	3H	domain
Cytokin_check_N	PF10407.4	gi|332796112|ref|YP_004457612.1|	-	0.022	14.3	0.2	0.31	10.6	0.0	2.4	1	1	0	2	2	2	0	Cdc14	phosphatase	binding	protein	N-terminus
ACT_4	PF13291.1	gi|332796112|ref|YP_004457612.1|	-	0.12	12.7	0.7	9.7	6.6	0.2	2.5	2	1	0	2	2	2	0	ACT	domain
MCR_gamma	PF02240.11	gi|332796112|ref|YP_004457612.1|	-	0.14	11.2	0.5	0.25	10.4	0.2	1.5	1	1	1	2	2	2	0	Methyl-coenzyme	M	reductase	gamma	subunit
Peptidase_S9	PF00326.16	gi|332796114|ref|YP_004457614.1|	-	2.9e-45	154.1	0.0	4.3e-45	153.5	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|332796114|ref|YP_004457614.1|	-	0.0025	17.5	0.0	0.0048	16.6	0.0	1.5	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9_N	PF02897.10	gi|332796114|ref|YP_004457614.1|	-	0.0034	16.0	0.4	0.0054	15.3	0.3	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
PaREP1	PF05942.6	gi|332796115|ref|YP_004457615.1|	-	3.6e-31	107.4	9.1	5.8e-31	106.7	6.3	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332796115|ref|YP_004457615.1|	-	4.9e-05	22.9	2.0	8.2e-05	22.2	0.3	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF357)
HEPN	PF05168.9	gi|332796115|ref|YP_004457615.1|	-	0.71	9.7	5.6	1.9	8.3	3.5	2.1	1	1	0	1	1	1	0	HEPN	domain
SRP54_N	PF02881.14	gi|332796115|ref|YP_004457615.1|	-	1.6	8.9	5.4	5	7.3	0.0	3.2	3	1	1	4	4	4	0	SRP54-type	protein,	helical	bundle	domain
HTH_24	PF13412.1	gi|332796116|ref|YP_004457616.1|	-	1.1e-14	53.4	0.1	1.7e-14	52.8	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.16	gi|332796116|ref|YP_004457616.1|	-	2.9e-12	46.1	0.0	5.1e-12	45.3	0.0	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_AsnC-type	PF13404.1	gi|332796116|ref|YP_004457616.1|	-	2.9e-12	45.8	0.0	4.6e-12	45.2	0.0	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_20	PF12840.2	gi|332796116|ref|YP_004457616.1|	-	3.7e-06	26.6	0.0	6.2e-06	25.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|332796116|ref|YP_004457616.1|	-	5.2e-05	22.8	0.0	0.00012	21.6	0.0	1.6	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|332796116|ref|YP_004457616.1|	-	0.00053	19.6	0.0	0.00089	18.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|332796116|ref|YP_004457616.1|	-	0.00083	19.2	0.0	0.0017	18.2	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|332796116|ref|YP_004457616.1|	-	0.002	17.7	0.0	0.0029	17.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|332796116|ref|YP_004457616.1|	-	0.0023	17.5	0.8	0.0046	16.6	0.2	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.4	gi|332796116|ref|YP_004457616.1|	-	0.0026	17.6	0.5	0.0081	16.0	0.2	1.9	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_11	PF08279.7	gi|332796116|ref|YP_004457616.1|	-	0.0042	16.6	0.0	0.0093	15.5	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_27	PF13463.1	gi|332796116|ref|YP_004457616.1|	-	0.013	15.8	0.0	0.033	14.5	0.0	1.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_23	PF13384.1	gi|332796116|ref|YP_004457616.1|	-	0.025	14.2	0.0	0.049	13.3	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
FeoC	PF09012.5	gi|332796116|ref|YP_004457616.1|	-	0.034	13.8	0.1	5.7	6.7	0.0	2.2	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
Rrf2	PF02082.15	gi|332796116|ref|YP_004457616.1|	-	0.041	14.0	0.1	0.12	12.4	0.0	1.8	2	0	0	2	2	1	0	Transcriptional	regulator
Mga	PF05043.8	gi|332796116|ref|YP_004457616.1|	-	0.059	13.6	0.0	0.14	12.4	0.0	1.5	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
UPF0122	PF04297.9	gi|332796116|ref|YP_004457616.1|	-	0.067	13.2	0.1	0.27	11.2	0.0	1.9	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_7	PF02796.10	gi|332796116|ref|YP_004457616.1|	-	0.073	12.9	0.0	0.15	11.9	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
DUF1730	PF08331.5	gi|332796116|ref|YP_004457616.1|	-	0.084	12.5	0.1	0.21	11.2	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1730)
HTH_30	PF13556.1	gi|332796116|ref|YP_004457616.1|	-	0.087	12.4	0.0	0.15	11.7	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.11	gi|332796116|ref|YP_004457616.1|	-	0.096	12.3	0.1	0.19	11.3	0.1	1.5	1	0	0	1	1	1	0	Transposase
HTH_WhiA	PF02650.9	gi|332796116|ref|YP_004457616.1|	-	0.11	12.8	0.0	0.23	11.8	0.0	1.5	1	0	0	1	1	1	0	WhiA	C-terminal	HTH	domain
HTH_IclR	PF09339.5	gi|332796116|ref|YP_004457616.1|	-	0.14	11.7	0.0	0.31	10.6	0.0	1.5	2	0	0	2	2	1	0	IclR	helix-turn-helix	domain
Aminotran_3	PF00202.16	gi|332796117|ref|YP_004457617.1|	-	1.9e-84	283.4	0.0	2.2e-84	283.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
FANCI_S4	PF14678.1	gi|332796118|ref|YP_004457618.1|	-	9.3e-05	21.6	0.5	0.00011	21.4	0.4	1.1	1	0	0	1	1	1	1	FANCI	solenoid	4
Dynamin_M	PF01031.15	gi|332796118|ref|YP_004457618.1|	-	0.0012	17.6	3.0	0.0015	17.3	2.1	1.0	1	0	0	1	1	1	1	Dynamin	central	region
Cohesin_load	PF10345.4	gi|332796118|ref|YP_004457618.1|	-	0.0015	16.8	0.5	0.0017	16.7	0.3	1.1	1	0	0	1	1	1	1	Cohesin	loading	factor
Laminin_I	PF06008.9	gi|332796118|ref|YP_004457618.1|	-	0.0035	16.7	3.4	0.006	15.9	2.4	1.5	1	1	0	1	1	1	1	Laminin	Domain	I
Seryl_tRNA_N	PF02403.17	gi|332796118|ref|YP_004457618.1|	-	0.004	17.1	8.3	0.011	15.7	5.7	2.0	1	1	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
EntA_Immun	PF08951.5	gi|332796118|ref|YP_004457618.1|	-	0.0054	16.8	3.7	0.86	9.7	0.3	2.2	1	1	0	2	2	2	2	Enterocin	A	Immunity
Cor1	PF04803.7	gi|332796118|ref|YP_004457618.1|	-	0.014	15.1	4.7	0.029	14.1	3.2	1.5	1	1	0	1	1	1	0	Cor1/Xlr/Xmr	conserved	region
DUF3450	PF11932.3	gi|332796118|ref|YP_004457618.1|	-	0.017	14.4	0.6	0.019	14.2	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
YxiJ	PF14176.1	gi|332796118|ref|YP_004457618.1|	-	0.018	15.1	0.6	0.02	14.9	0.4	1.1	1	0	0	1	1	1	0	YxiJ-like	protein
Use1	PF09753.4	gi|332796118|ref|YP_004457618.1|	-	0.029	13.7	3.9	0.039	13.3	2.7	1.1	1	0	0	1	1	1	0	Membrane	fusion	protein	Use1
Adaptin_binding	PF10199.4	gi|332796118|ref|YP_004457618.1|	-	0.039	14.2	3.0	0.045	14.0	2.1	1.2	1	0	0	1	1	1	0	Alpha	and	gamma	adaptin	binding	protein	p34
Phage_30_8	PF06019.6	gi|332796118|ref|YP_004457618.1|	-	0.047	13.3	2.9	0.25	11.0	0.2	2.1	1	1	0	2	2	2	0	Phage	GP30.8	protein
FlaC_arch	PF05377.6	gi|332796118|ref|YP_004457618.1|	-	0.058	13.2	2.2	2.7	7.9	0.3	2.4	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
BAR_2	PF10455.4	gi|332796118|ref|YP_004457618.1|	-	0.061	12.2	4.9	0.07	12.0	3.4	1.1	1	0	0	1	1	1	0	Bin/amphiphysin/Rvs	domain	for	vesicular	trafficking
DUF2935	PF11155.3	gi|332796118|ref|YP_004457618.1|	-	0.066	13.3	2.4	0.093	12.8	0.7	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2935)
Evr1_Alr	PF04777.8	gi|332796118|ref|YP_004457618.1|	-	0.067	13.0	0.1	0.15	12.0	0.0	1.6	1	1	1	2	2	2	0	Erv1	/	Alr	family
Laminin_II	PF06009.7	gi|332796118|ref|YP_004457618.1|	-	0.08	12.6	5.1	0.49	10.1	3.6	2.0	1	1	0	1	1	1	0	Laminin	Domain	II
Baculo_PEP_C	PF04513.7	gi|332796118|ref|YP_004457618.1|	-	0.083	12.7	0.5	0.13	12.0	0.3	1.4	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DnaB	PF00772.16	gi|332796118|ref|YP_004457618.1|	-	0.089	12.6	0.5	0.12	12.2	0.3	1.4	1	1	0	1	1	1	0	DnaB-like	helicase	N	terminal	domain
DUF438	PF04282.8	gi|332796118|ref|YP_004457618.1|	-	0.095	12.5	0.4	0.3	10.8	0.2	2.0	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF438)
DUF2309	PF10070.4	gi|332796118|ref|YP_004457618.1|	-	0.098	10.7	0.4	0.1	10.6	0.3	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2309)
DUF3829	PF12889.2	gi|332796118|ref|YP_004457618.1|	-	0.1	11.7	7.4	0.12	11.4	5.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
Beta-Casp	PF10996.3	gi|332796118|ref|YP_004457618.1|	-	0.11	12.3	0.2	0.13	12.1	0.1	1.2	1	0	0	1	1	1	0	Beta-Casp	domain
DUF643	PF04867.7	gi|332796118|ref|YP_004457618.1|	-	0.13	12.6	9.4	0.15	12.4	6.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF643)
DUF2115	PF09888.4	gi|332796118|ref|YP_004457618.1|	-	0.14	12.2	1.7	0.18	11.9	1.2	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
DUF4047	PF13256.1	gi|332796118|ref|YP_004457618.1|	-	0.18	11.7	2.5	0.22	11.4	0.7	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4047)
Z1	PF10593.4	gi|332796118|ref|YP_004457618.1|	-	0.19	10.9	2.3	0.23	10.6	1.6	1.1	1	0	0	1	1	1	0	Z1	domain
DUF883	PF05957.8	gi|332796118|ref|YP_004457618.1|	-	0.24	11.8	3.3	4.1	7.8	0.3	2.3	2	1	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
IncA	PF04156.9	gi|332796118|ref|YP_004457618.1|	-	0.28	10.7	4.8	0.44	10.1	3.3	1.4	1	1	0	1	1	1	0	IncA	protein
DivIVA	PF05103.8	gi|332796118|ref|YP_004457618.1|	-	0.3	11.1	6.0	0.42	10.6	0.7	2.0	1	1	1	2	2	2	0	DivIVA	protein
AATF-Che1	PF13339.1	gi|332796118|ref|YP_004457618.1|	-	0.36	10.9	4.3	0.44	10.7	1.7	1.8	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
DUF1664	PF07889.7	gi|332796118|ref|YP_004457618.1|	-	0.39	10.5	4.4	0.58	9.9	2.7	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
LMBR1	PF04791.11	gi|332796118|ref|YP_004457618.1|	-	0.42	9.1	3.0	0.45	9.0	2.1	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Sec5	PF15469.1	gi|332796118|ref|YP_004457618.1|	-	0.49	10.1	5.4	0.71	9.5	1.7	2.0	1	1	1	2	2	2	0	Exocyst	complex	component	Sec5
FliD_N	PF02465.13	gi|332796118|ref|YP_004457618.1|	-	0.53	10.6	3.1	1.3	9.4	1.9	1.8	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
Med9	PF07544.8	gi|332796118|ref|YP_004457618.1|	-	0.54	10.0	5.5	1.3	8.8	3.3	2.1	1	1	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Toxin_52	PF15605.1	gi|332796118|ref|YP_004457618.1|	-	0.56	10.1	3.8	2	8.3	2.6	1.9	1	1	0	1	1	1	0	Putative	toxin	52
Snapin_Pallidin	PF14712.1	gi|332796118|ref|YP_004457618.1|	-	0.66	10.3	6.2	0.28	11.4	1.8	1.9	1	1	1	2	2	2	0	Snapin/Pallidin
4HB_MCP_1	PF12729.2	gi|332796118|ref|YP_004457618.1|	-	1.1	8.5	9.7	14	4.9	6.7	2.0	1	1	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
DUF4200	PF13863.1	gi|332796118|ref|YP_004457618.1|	-	1.7	8.5	9.2	2.7	7.9	6.0	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
GrpE	PF01025.14	gi|332796118|ref|YP_004457618.1|	-	2.7	7.4	7.6	9.4	5.7	5.3	1.7	1	1	0	1	1	1	0	GrpE
Syntaxin	PF00804.20	gi|332796118|ref|YP_004457618.1|	-	3.6	7.7	9.6	5	7.3	2.8	2.2	1	1	1	2	2	2	0	Syntaxin
ISG65-75	PF11727.3	gi|332796118|ref|YP_004457618.1|	-	4.8	6.1	8.0	7.3	5.5	5.5	1.4	1	1	0	1	1	1	0	Invariant	surface	glycoprotein
Remorin_C	PF03763.8	gi|332796118|ref|YP_004457618.1|	-	6.7	6.2	8.6	14	5.3	3.7	2.2	1	1	1	2	2	2	0	Remorin,	C-terminal	region
Peptidase_M19	PF01244.16	gi|332796119|ref|YP_004457619.1|	-	7.4e-64	215.6	0.0	1e-63	215.2	0.0	1.1	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
Sugar_tr	PF00083.19	gi|332796120|ref|YP_004457620.1|	-	1.7e-81	274.1	37.7	2e-81	273.9	26.1	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332796120|ref|YP_004457620.1|	-	3e-19	68.9	43.9	3e-19	68.9	30.4	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
YtxH	PF12732.2	gi|332796120|ref|YP_004457620.1|	-	1.3	9.4	0.0	1.3	9.4	0.0	2.7	3	0	0	3	3	3	0	YtxH-like	protein
PAP2	PF01569.16	gi|332796121|ref|YP_004457621.1|	-	5.8e-24	84.2	2.2	5.8e-24	84.2	1.5	1.7	2	0	0	2	2	2	1	PAP2	superfamily
TP6A_N	PF04406.9	gi|332796123|ref|YP_004457623.1|	-	0.093	12.4	0.0	0.24	11.0	0.0	1.7	1	1	0	1	1	1	0	Type	IIB	DNA	topoisomerase
SWIM	PF04434.12	gi|332796124|ref|YP_004457624.1|	-	0.00028	20.2	0.1	0.00046	19.5	0.1	1.3	1	0	0	1	1	1	1	SWIM	zinc	finger
AA_permease_2	PF13520.1	gi|332796125|ref|YP_004457625.1|	-	1.8e-34	119.0	43.2	1.8e-34	119.0	30.0	2.0	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332796125|ref|YP_004457625.1|	-	4.5e-22	78.0	42.8	4.5e-22	78.0	29.7	1.9	1	1	1	2	2	2	1	Amino	acid	permease
Vma12	PF11712.3	gi|332796125|ref|YP_004457625.1|	-	3.2	7.4	4.7	3.6	7.2	1.8	2.1	2	0	0	2	2	2	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
NicO	PF03824.11	gi|332796126|ref|YP_004457626.1|	-	0.00051	19.4	1.0	0.00051	19.4	0.7	2.8	2	1	0	3	3	3	2	High-affinity	nickel-transport	protein
LysE	PF01810.13	gi|332796126|ref|YP_004457626.1|	-	0.0084	15.4	4.1	0.02	14.1	2.6	2.0	1	1	0	1	1	1	1	LysE	type	translocator
DUF72	PF01904.13	gi|332796127|ref|YP_004457627.1|	-	2.2e-43	148.6	0.6	2.5e-43	148.4	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
NurA	PF09376.5	gi|332796129|ref|YP_004457629.1|	-	1.3e-13	50.9	1.5	2.2e-13	50.2	1.0	1.4	1	1	0	1	1	1	1	NurA	domain
AAA_10	PF12846.2	gi|332796130|ref|YP_004457630.1|	-	9.4e-16	58.1	0.3	2.4e-15	56.7	0.2	1.6	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|332796130|ref|YP_004457630.1|	-	4e-13	49.7	3.1	6.9e-13	48.9	0.1	2.7	2	1	1	3	3	3	1	Domain	of	unknown	function	DUF87
AAA	PF00004.24	gi|332796130|ref|YP_004457630.1|	-	4.2e-08	33.4	1.0	7.2e-05	23.0	0.1	2.9	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.4	gi|332796130|ref|YP_004457630.1|	-	9.1e-08	31.1	0.0	1.7e-07	30.2	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|332796130|ref|YP_004457630.1|	-	1.7e-06	27.6	0.1	9.2e-05	22.0	0.0	2.4	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|332796130|ref|YP_004457630.1|	-	1.8e-06	28.0	0.0	0.00046	20.3	0.0	2.9	2	1	0	2	2	2	1	AAA	domain
DUF853	PF05872.7	gi|332796130|ref|YP_004457630.1|	-	4.7e-05	21.9	0.1	0.08	11.2	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
DEAD	PF00270.24	gi|332796130|ref|YP_004457630.1|	-	0.00014	21.4	0.0	0.072	12.5	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|332796130|ref|YP_004457630.1|	-	0.00021	21.1	0.3	0.12	12.2	0.0	2.5	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_25	PF13481.1	gi|332796130|ref|YP_004457630.1|	-	0.00023	20.6	0.1	0.86	8.9	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
ABC_tran	PF00005.22	gi|332796130|ref|YP_004457630.1|	-	0.00088	19.5	0.0	0.003	17.8	0.0	1.9	1	0	0	1	1	1	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|332796130|ref|YP_004457630.1|	-	0.0015	18.2	1.0	0.013	15.2	0.0	2.4	2	0	0	2	2	2	1	Archaeal	ATPase
T2SE	PF00437.15	gi|332796130|ref|YP_004457630.1|	-	0.0024	16.8	0.1	0.005	15.7	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|332796130|ref|YP_004457630.1|	-	0.0026	17.4	0.1	0.062	12.9	0.0	2.2	2	0	0	2	2	2	1	NACHT	domain
DUF2075	PF09848.4	gi|332796130|ref|YP_004457630.1|	-	0.0043	16.0	0.1	1.3	7.9	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
AAA_29	PF13555.1	gi|332796130|ref|YP_004457630.1|	-	0.0044	16.5	0.0	0.013	15.0	0.0	1.8	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
cobW	PF02492.14	gi|332796130|ref|YP_004457630.1|	-	0.0065	15.9	0.1	0.013	14.9	0.0	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|332796130|ref|YP_004457630.1|	-	0.011	15.6	1.6	0.71	9.7	0.0	3.3	3	0	0	3	3	3	0	AAA	domain
AAA_16	PF13191.1	gi|332796130|ref|YP_004457630.1|	-	0.011	15.6	0.1	0.11	12.5	0.0	2.3	2	1	0	2	2	2	0	AAA	ATPase	domain
Zot	PF05707.7	gi|332796130|ref|YP_004457630.1|	-	0.012	15.1	0.3	0.086	12.3	0.0	2.1	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
G-alpha	PF00503.15	gi|332796130|ref|YP_004457630.1|	-	0.013	14.1	0.3	0.019	13.6	0.2	1.4	1	1	0	1	1	1	0	G-protein	alpha	subunit
Miro	PF08477.8	gi|332796130|ref|YP_004457630.1|	-	0.06	13.8	0.2	0.17	12.3	0.0	1.8	2	0	0	2	2	1	0	Miro-like	protein
AAA_18	PF13238.1	gi|332796130|ref|YP_004457630.1|	-	0.088	13.1	1.3	0.2	11.9	0.0	2.3	3	0	0	3	3	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|332796130|ref|YP_004457630.1|	-	0.089	12.2	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
TctA	PF01970.11	gi|332796130|ref|YP_004457630.1|	-	0.15	10.4	0.0	0.22	9.8	0.0	1.1	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctA	family
AAA_23	PF13476.1	gi|332796130|ref|YP_004457630.1|	-	6.4	7.0	15.0	1.1	9.5	5.1	3.0	2	1	0	2	2	2	0	AAA	domain
PaREP1	PF05942.6	gi|332796131|ref|YP_004457631.1|	-	3.5e-23	81.6	0.4	4.2e-23	81.4	0.3	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332796131|ref|YP_004457631.1|	-	0.039	13.8	0.1	0.059	13.2	0.0	1.4	1	1	0	1	1	1	0	HEPN	domain
PaREP1	PF05942.6	gi|332796132|ref|YP_004457632.1|	-	1.2e-20	73.4	0.9	1.4e-20	73.2	0.6	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF1837	PF08878.6	gi|332796132|ref|YP_004457632.1|	-	0.015	14.9	1.7	0.024	14.2	1.2	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1837)
DUF874	PF05917.6	gi|332796132|ref|YP_004457632.1|	-	0.016	14.0	0.1	0.018	13.8	0.1	1.1	1	0	0	1	1	1	0	Helicobacter	pylori	protein	of	unknown	function	(DUF874)
P5CR_dimer	PF14748.1	gi|332796133|ref|YP_004457633.1|	-	9.7e-33	112.3	0.0	1.7e-32	111.6	0.0	1.4	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.12	gi|332796133|ref|YP_004457633.1|	-	1.2e-18	67.2	0.3	3e-18	66.0	0.2	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|332796133|ref|YP_004457633.1|	-	5.3e-08	32.7	1.8	1.3e-06	28.2	1.3	2.2	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DapB_N	PF01113.15	gi|332796133|ref|YP_004457633.1|	-	1.1e-06	28.5	0.3	8.6e-06	25.6	0.2	2.1	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
ApbA	PF02558.11	gi|332796133|ref|YP_004457633.1|	-	1.4e-06	27.8	0.1	2.1e-06	27.2	0.1	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
2-Hacid_dh_C	PF02826.14	gi|332796133|ref|YP_004457633.1|	-	0.00023	20.3	0.0	0.00038	19.6	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|332796133|ref|YP_004457633.1|	-	0.00041	20.2	0.1	0.00071	19.4	0.1	1.6	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|332796133|ref|YP_004457633.1|	-	0.0005	20.5	0.0	0.00087	19.8	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
PDH	PF02153.12	gi|332796133|ref|YP_004457633.1|	-	0.056	12.3	0.0	0.14	11.0	0.0	1.6	2	0	0	2	2	2	0	Prephenate	dehydrogenase
OCD_Mu_crystall	PF02423.10	gi|332796133|ref|YP_004457633.1|	-	0.074	11.8	0.1	0.11	11.2	0.0	1.3	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
TrkA_N	PF02254.13	gi|332796133|ref|YP_004457633.1|	-	0.078	12.9	0.1	0.15	12.0	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
Shikimate_DH	PF01488.15	gi|332796133|ref|YP_004457633.1|	-	0.11	12.6	0.0	0.22	11.6	0.0	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Saccharop_dh	PF03435.13	gi|332796133|ref|YP_004457633.1|	-	0.11	11.4	0.0	0.17	10.8	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
NHase_alpha	PF02979.11	gi|332796134|ref|YP_004457634.1|	-	0.12	11.6	0.0	0.22	10.8	0.0	1.4	1	0	0	1	1	1	0	Nitrile	hydratase,	alpha	chain
MFS_3	PF05977.8	gi|332796135|ref|YP_004457635.1|	-	0.094	10.8	10.1	0.051	11.6	1.4	2.8	2	1	0	2	2	2	0	Transmembrane	secretion	effector
Cyclase	PF04199.8	gi|332796136|ref|YP_004457636.1|	-	2.1e-28	99.1	0.0	4.6e-28	98.0	0.0	1.5	1	1	0	1	1	1	1	Putative	cyclase
CHAD	PF05235.9	gi|332796137|ref|YP_004457637.1|	-	5.8e-08	32.5	0.0	0.0082	15.7	0.0	2.1	1	1	1	2	2	2	2	CHAD	domain
Transposase_22	PF02994.9	gi|332796137|ref|YP_004457637.1|	-	0.011	14.2	1.1	0.016	13.7	0.8	1.2	1	0	0	1	1	1	0	L1	transposable	element
DUF1319	PF07028.6	gi|332796137|ref|YP_004457637.1|	-	0.016	15.3	2.2	0.038	14.1	1.5	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
DNA_Packaging	PF11053.3	gi|332796137|ref|YP_004457637.1|	-	0.1	12.2	0.1	0.21	11.2	0.1	1.6	1	0	0	1	1	1	0	Terminase	DNA	packaging	enzyme
DUF972	PF06156.8	gi|332796137|ref|YP_004457637.1|	-	0.19	12.0	1.1	0.56	10.5	0.1	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
Thymidylate_kin	PF02223.12	gi|332796138|ref|YP_004457638.1|	-	2.7e-17	62.7	0.1	3.7e-17	62.2	0.0	1.3	1	1	0	1	1	1	1	Thymidylate	kinase
Thymidylate_kin	PF02223.12	gi|332796139|ref|YP_004457639.1|	-	5.8e-28	97.5	0.2	2.2e-27	95.6	0.1	1.7	1	1	0	1	1	1	1	Thymidylate	kinase
dNK	PF01712.14	gi|332796139|ref|YP_004457639.1|	-	0.00024	21.0	0.2	0.0005	20.0	0.2	1.7	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.1	gi|332796139|ref|YP_004457639.1|	-	0.00026	21.2	0.2	0.0014	18.9	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|332796139|ref|YP_004457639.1|	-	0.025	14.4	0.0	0.05	13.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF4160	PF13711.1	gi|332796139|ref|YP_004457639.1|	-	0.081	12.7	0.3	0.22	11.4	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4160)
Ppx-GppA	PF02541.11	gi|332796140|ref|YP_004457640.1|	-	3.3e-43	147.9	0.4	7.2e-43	146.7	0.3	1.5	1	1	0	1	1	1	1	Ppx/GppA	phosphatase	family
EutA	PF06277.6	gi|332796140|ref|YP_004457640.1|	-	0.0045	15.6	0.4	0.02	13.4	0.1	1.8	1	1	1	2	2	2	1	Ethanolamine	utilisation	protein	EutA
His_Phos_1	PF00300.17	gi|332796141|ref|YP_004457641.1|	-	2.5e-14	53.6	0.0	2.2e-12	47.3	0.0	2.0	1	1	1	2	2	2	2	Histidine	phosphatase	superfamily	(branch	1)
Cupin_2	PF07883.6	gi|332796142|ref|YP_004457642.1|	-	5.2e-13	48.2	0.0	6.8e-13	47.9	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.14	gi|332796142|ref|YP_004457642.1|	-	2.5e-07	30.4	0.0	3.4e-07	30.0	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Ectoine_synth	PF06339.7	gi|332796142|ref|YP_004457642.1|	-	9.8e-06	25.5	0.1	1.2e-05	25.2	0.1	1.0	1	0	0	1	1	1	1	Ectoine	synthase
MannoseP_isomer	PF01050.13	gi|332796142|ref|YP_004457642.1|	-	5.6e-05	22.7	0.1	7e-05	22.4	0.0	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_3	PF05899.7	gi|332796142|ref|YP_004457642.1|	-	0.00018	20.8	0.1	0.00045	19.5	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF861)
Cupin_1	PF00190.17	gi|332796142|ref|YP_004457642.1|	-	0.00041	19.8	0.0	0.00054	19.4	0.0	1.1	1	0	0	1	1	1	1	Cupin
DUF4437	PF14499.1	gi|332796142|ref|YP_004457642.1|	-	0.0031	16.4	0.0	0.0037	16.1	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4437)
Cupin_6	PF12852.2	gi|332796142|ref|YP_004457642.1|	-	0.0094	15.5	0.0	0.011	15.3	0.0	1.1	1	0	0	1	1	1	1	Cupin
Cupin_7	PF12973.2	gi|332796142|ref|YP_004457642.1|	-	0.013	15.3	0.0	0.018	14.8	0.0	1.1	1	0	0	1	1	1	0	ChrR	Cupin-like	domain
Asp_Arg_Hydrox	PF05118.10	gi|332796142|ref|YP_004457642.1|	-	0.023	14.5	0.0	0.026	14.3	0.0	1.2	1	0	0	1	1	1	0	Aspartyl/Asparaginyl	beta-hydroxylase
Sugar_tr	PF00083.19	gi|332796143|ref|YP_004457643.1|	-	8.3e-54	182.8	20.0	1.1e-53	182.4	13.9	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332796143|ref|YP_004457643.1|	-	4e-24	84.9	56.5	1.3e-20	73.4	22.7	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Gly-zipper_Omp	PF13488.1	gi|332796143|ref|YP_004457643.1|	-	4.1	7.1	10.4	5.1	6.8	4.2	3.2	2	1	0	2	2	2	0	Glycine	zipper
Peptidase_M20	PF01546.23	gi|332796145|ref|YP_004457645.1|	-	8.9e-19	67.7	0.0	1.1e-18	67.4	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|332796145|ref|YP_004457645.1|	-	2.5e-14	52.9	0.0	4.7e-14	52.0	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|332796145|ref|YP_004457645.1|	-	0.045	13.4	0.0	0.082	12.6	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	M28
DUF3739	PF12545.3	gi|332796145|ref|YP_004457645.1|	-	0.11	12.6	0.0	0.19	11.8	0.0	1.4	1	0	0	1	1	1	0	Filamentous	haemagglutinin	family	outer	membrane	protein
Gln-synt_C	PF00120.19	gi|332796146|ref|YP_004457646.1|	-	2.3e-75	253.1	0.0	3.9e-75	252.3	0.0	1.4	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
TFIIA_gamma_N	PF02268.11	gi|332796146|ref|YP_004457646.1|	-	0.038	13.5	1.1	0.11	12.1	0.0	2.3	2	0	0	2	2	2	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
Amidohydro_2	PF04909.9	gi|332796147|ref|YP_004457647.1|	-	1.1e-26	94.0	0.0	1.8e-26	93.3	0.0	1.4	1	1	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|332796147|ref|YP_004457647.1|	-	0.00075	18.7	0.0	0.0012	18.0	0.0	1.3	1	0	0	1	1	1	1	TatD	related	DNase
HAD_2	PF13419.1	gi|332796148|ref|YP_004457648.1|	-	5.6e-17	62.5	0.0	6.6e-17	62.2	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|332796148|ref|YP_004457648.1|	-	0.0018	17.9	0.0	0.003	17.2	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
NIF	PF03031.13	gi|332796148|ref|YP_004457648.1|	-	0.02	14.5	0.0	0.071	12.7	0.0	1.9	2	0	0	2	2	2	0	NLI	interacting	factor-like	phosphatase
PNK3P	PF08645.6	gi|332796148|ref|YP_004457648.1|	-	0.022	14.1	0.1	0.033	13.6	0.1	1.3	1	0	0	1	1	1	0	Polynucleotide	kinase	3	phosphatase
AIM24	PF01987.12	gi|332796149|ref|YP_004457649.1|	-	2.5e-52	177.4	0.4	2.9e-52	177.2	0.3	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
Sugar_tr	PF00083.19	gi|332796150|ref|YP_004457650.1|	-	2.1e-51	174.8	26.1	2.6e-51	174.6	18.1	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332796150|ref|YP_004457650.1|	-	4.4e-28	98.0	30.8	4.4e-28	98.0	21.3	1.9	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
2TM	PF13239.1	gi|332796150|ref|YP_004457650.1|	-	0.83	9.7	3.7	0.79	9.8	0.2	2.8	2	0	0	2	2	2	0	2TM	domain
EVE	PF01878.13	gi|332796151|ref|YP_004457651.1|	-	1.1e-16	61.1	0.1	1.3e-16	60.9	0.0	1.0	1	0	0	1	1	1	1	EVE	domain
DUF2197	PF09963.4	gi|332796151|ref|YP_004457651.1|	-	0.0038	17.1	0.0	0.0097	15.8	0.0	1.6	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2197)
DUF1286	PF06939.6	gi|332796152|ref|YP_004457652.1|	-	4.5e-39	133.1	6.0	4.5e-39	133.1	4.1	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|332796152|ref|YP_004457652.1|	-	0.081	12.2	10.0	0.28	10.4	6.9	1.8	1	1	0	1	1	1	0	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
DER1	PF04511.10	gi|332796153|ref|YP_004457653.1|	-	0.1	12.0	1.3	0.1	12.0	0.9	1.0	1	0	0	1	1	1	0	Der1-like	family
PaREP1	PF05942.6	gi|332796155|ref|YP_004457655.1|	-	7.4e-21	74.1	0.0	9.7e-21	73.7	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Herpes_UL92	PF03048.9	gi|332796156|ref|YP_004457656.1|	-	0.41	10.1	2.1	0.39	10.2	1.4	1.0	1	0	0	1	1	1	0	UL92	family
DUF504	PF04457.7	gi|332796157|ref|YP_004457657.1|	-	1.1e-16	60.6	1.6	1.4e-16	60.3	1.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
HEPN	PF05168.9	gi|332796160|ref|YP_004457660.1|	-	1.7e-25	89.1	0.2	2e-25	88.9	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|332796161|ref|YP_004457661.1|	-	2.2e-14	53.5	3.0	2.6e-14	53.3	2.1	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|332796161|ref|YP_004457661.1|	-	0.00047	19.7	0.0	0.00074	19.1	0.0	1.4	1	1	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
DNA_pol_B_palm	PF14792.1	gi|332796161|ref|YP_004457661.1|	-	0.1	12.6	0.0	0.17	11.9	0.0	1.4	1	1	0	1	1	1	0	DNA	polymerase	beta	palm
DUF1327	PF07041.6	gi|332796161|ref|YP_004457661.1|	-	0.1	12.4	0.4	0.12	12.2	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1327)
UbiA	PF01040.13	gi|332796162|ref|YP_004457662.1|	-	2e-25	89.4	26.2	2.4e-25	89.2	18.2	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Chrome_Resist	PF09828.4	gi|332796162|ref|YP_004457662.1|	-	0.12	12.5	0.0	0.19	11.8	0.0	1.3	1	0	0	1	1	1	0	Chromate	resistance	exported	protein
HMGL-like	PF00682.14	gi|332796163|ref|YP_004457663.1|	-	8.4e-50	169.6	0.0	1.3e-49	169.0	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.5	gi|332796163|ref|YP_004457663.1|	-	1e-21	77.1	0.0	2e-21	76.1	0.0	1.5	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
Radical_SAM	PF04055.16	gi|332796163|ref|YP_004457663.1|	-	0.026	14.6	0.2	0.082	13.0	0.0	1.9	2	0	0	2	2	2	0	Radical	SAM	superfamily
PEP_mutase	PF13714.1	gi|332796163|ref|YP_004457663.1|	-	0.027	13.6	0.0	0.045	12.9	0.0	1.2	1	0	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
URO-D	PF01208.12	gi|332796163|ref|YP_004457663.1|	-	0.049	12.5	0.0	0.21	10.4	0.0	2.0	2	1	1	3	3	3	0	Uroporphyrinogen	decarboxylase	(URO-D)
Alpha-amylase_C	PF02806.13	gi|332796164|ref|YP_004457664.1|	-	0.051	13.7	0.5	0.26	11.4	0.1	2.1	1	1	1	2	2	2	0	Alpha	amylase,	C-terminal	all-beta	domain
Peripla_BP_2	PF01497.13	gi|332796165|ref|YP_004457665.1|	-	3.6e-21	75.3	0.0	5.3e-21	74.8	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
Ndr	PF03096.9	gi|332796165|ref|YP_004457665.1|	-	0.15	10.5	0.0	0.21	10.0	0.0	1.2	1	0	0	1	1	1	0	Ndr	family
CbiG_N	PF11760.3	gi|332796166|ref|YP_004457666.1|	-	1.2e-05	24.9	0.0	5.5e-05	22.7	0.0	2.1	2	0	0	2	2	2	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|332796166|ref|YP_004457666.1|	-	0.0029	17.8	0.0	0.0056	16.9	0.0	1.5	1	0	0	1	1	1	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.3	gi|332796166|ref|YP_004457666.1|	-	0.016	15.4	0.0	0.026	14.7	0.0	1.4	1	0	0	1	1	1	0	Cobalamin	biosynthesis	central	region
Imm6	PF14434.1	gi|332796166|ref|YP_004457666.1|	-	0.24	11.1	5.0	0.19	11.4	2.0	1.9	2	0	0	2	2	2	0	Immunity	protein	Imm6
Arc_PepC_II	PF06847.6	gi|332796167|ref|YP_004457667.1|	-	3.2e-19	69.1	0.0	5.9e-19	68.2	0.0	1.4	1	0	0	1	1	1	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|332796167|ref|YP_004457667.1|	-	1.4e-07	31.6	9.9	1.4e-07	31.6	6.9	1.8	2	0	0	2	2	2	1	Type	IV	leader	peptidase	family
Acyl-CoA_dh_1	PF00441.19	gi|332796168|ref|YP_004457668.1|	-	3.6e-42	144.0	6.6	5.2e-42	143.4	4.6	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|332796168|ref|YP_004457668.1|	-	2.6e-20	73.0	4.8	5.7e-20	71.9	3.3	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|332796168|ref|YP_004457668.1|	-	7.7e-19	66.9	0.1	1.7e-18	65.8	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|332796168|ref|YP_004457668.1|	-	2.4e-15	57.0	0.0	3.8e-14	53.2	0.0	2.4	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
CitMHS	PF03600.11	gi|332796169|ref|YP_004457669.1|	-	1.4e-35	122.4	25.7	5.8e-32	110.6	16.4	2.0	1	1	1	2	2	2	2	Citrate	transporter
4HBT	PF03061.17	gi|332796170|ref|YP_004457670.1|	-	4.9e-20	71.4	0.1	1.3e-09	38.0	0.0	2.2	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|332796170|ref|YP_004457670.1|	-	0.00012	22.4	0.0	0.41	11.0	0.0	2.2	1	1	0	2	2	2	2	Thioesterase-like	superfamily
Acyl-ACP_TE	PF01643.12	gi|332796170|ref|YP_004457670.1|	-	0.0053	15.7	2.8	0.01	14.7	0.6	1.9	2	0	0	2	2	2	1	Acyl-ACP	thioesterase
TAF1D	PF15333.1	gi|332796171|ref|YP_004457671.1|	-	0.087	12.6	0.2	0.33	10.6	0.0	1.8	1	1	0	2	2	2	0	TATA	box-binding	protein-associated	factor	1D
AAA_10	PF12846.2	gi|332796172|ref|YP_004457672.1|	-	4.5e-23	82.1	2.9	1.4e-21	77.2	2.0	2.1	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|332796172|ref|YP_004457672.1|	-	4.2e-14	52.9	3.9	2.6e-13	50.3	2.7	2.2	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|332796172|ref|YP_004457672.1|	-	8e-09	34.3	0.0	4.2e-05	22.1	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|332796172|ref|YP_004457672.1|	-	1.3e-07	30.5	0.0	5.5e-07	28.5	0.0	1.8	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.24	gi|332796172|ref|YP_004457672.1|	-	2.3e-05	24.6	0.6	0.033	14.4	0.0	3.0	3	0	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|332796172|ref|YP_004457672.1|	-	2.3e-05	24.5	0.1	0.082	13.0	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
ResIII	PF04851.10	gi|332796172|ref|YP_004457672.1|	-	0.00033	20.5	0.0	1	9.1	0.0	2.4	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
FtsK_SpoIIIE	PF01580.13	gi|332796172|ref|YP_004457672.1|	-	0.00047	19.7	0.0	0.0025	17.3	0.0	1.9	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
Zot	PF05707.7	gi|332796172|ref|YP_004457672.1|	-	0.00067	19.1	0.2	0.0028	17.1	0.0	1.9	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
Miro	PF08477.8	gi|332796172|ref|YP_004457672.1|	-	0.022	15.2	0.1	0.1	13.1	0.0	2.2	2	0	0	2	2	2	0	Miro-like	protein
AAA_24	PF13479.1	gi|332796172|ref|YP_004457672.1|	-	0.096	12.2	0.2	0.14	11.7	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|332796172|ref|YP_004457672.1|	-	0.098	12.9	0.0	0.24	11.6	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
UPF0079	PF02367.12	gi|332796172|ref|YP_004457672.1|	-	0.1	12.2	0.1	0.2	11.2	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_25	PF13481.1	gi|332796172|ref|YP_004457672.1|	-	0.1	12.0	0.0	4.5	6.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|332796172|ref|YP_004457672.1|	-	0.18	12.1	5.1	0.46	10.7	3.5	1.7	1	1	0	1	1	1	0	AAA	domain
NurA	PF09376.5	gi|332796173|ref|YP_004457673.1|	-	1.3e-18	67.4	1.6	1.8e-18	66.9	1.1	1.1	1	0	0	1	1	1	1	NurA	domain
Pyr_redox_2	PF07992.9	gi|332796174|ref|YP_004457674.1|	-	8.9e-30	104.0	4.6	1.8e-28	99.8	3.2	3.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332796174|ref|YP_004457674.1|	-	6.8e-19	68.0	10.9	1.2e-15	57.6	1.4	3.7	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|332796174|ref|YP_004457674.1|	-	4.7e-17	62.0	0.2	4.7e-17	62.0	0.1	1.8	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|332796174|ref|YP_004457674.1|	-	3.4e-10	40.3	0.3	9.7e-06	25.7	0.0	3.1	2	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332796174|ref|YP_004457674.1|	-	2.9e-06	26.0	7.4	0.017	13.5	0.0	3.6	3	1	1	4	4	4	2	HI0933-like	protein
GIDA	PF01134.17	gi|332796174|ref|YP_004457674.1|	-	3.2e-05	22.9	2.4	0.061	12.1	0.0	3.0	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332796174|ref|YP_004457674.1|	-	4.3e-05	23.4	0.6	0.058	13.4	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|332796174|ref|YP_004457674.1|	-	0.00076	18.4	5.4	0.42	9.3	0.0	3.2	3	0	0	3	3	3	2	FAD	binding	domain
TrkA_N	PF02254.13	gi|332796174|ref|YP_004457674.1|	-	0.0014	18.6	0.5	0.062	13.3	0.3	2.5	2	0	0	2	2	2	1	TrkA-N	domain
K_oxygenase	PF13434.1	gi|332796174|ref|YP_004457674.1|	-	0.0026	16.7	0.0	0.005	15.8	0.0	1.5	2	0	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_7	PF13241.1	gi|332796174|ref|YP_004457674.1|	-	0.0026	17.9	0.4	2	8.7	0.0	2.6	2	0	0	2	2	2	2	Putative	NAD(P)-binding
Cyanate_lyase	PF02560.9	gi|332796174|ref|YP_004457674.1|	-	0.003	17.0	0.2	0.01	15.3	0.1	1.9	1	0	0	1	1	1	1	Cyanate	lyase	C-terminal	domain
DAO	PF01266.19	gi|332796174|ref|YP_004457674.1|	-	0.0031	16.4	7.8	0.099	11.5	1.6	3.2	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|332796174|ref|YP_004457674.1|	-	0.0037	16.2	0.9	0.54	9.1	0.0	2.4	2	0	0	2	2	2	1	Lycopene	cyclase	protein
F420_oxidored	PF03807.12	gi|332796174|ref|YP_004457674.1|	-	0.0045	17.3	1.7	0.071	13.5	0.2	3.0	3	0	0	3	3	3	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|332796174|ref|YP_004457674.1|	-	0.006	16.3	0.1	0.26	11.0	0.0	2.4	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|332796174|ref|YP_004457674.1|	-	0.015	15.0	0.1	0.036	13.9	0.1	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Trp_halogenase	PF04820.9	gi|332796174|ref|YP_004457674.1|	-	0.025	13.2	1.9	0.32	9.5	0.0	2.2	2	0	0	2	2	2	0	Tryptophan	halogenase
3HCDH_N	PF02737.13	gi|332796174|ref|YP_004457674.1|	-	0.059	13.0	0.2	0.059	13.0	0.2	1.7	2	0	0	2	2	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|332796174|ref|YP_004457674.1|	-	0.085	12.6	3.4	10	5.8	0.0	3.6	4	0	0	4	4	4	0	FAD-NAD(P)-binding
Amino_oxidase	PF01593.19	gi|332796174|ref|YP_004457674.1|	-	0.11	11.5	0.1	0.31	10.0	0.0	1.7	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
CPSase_L_chain	PF00289.17	gi|332796174|ref|YP_004457674.1|	-	0.16	12.0	1.5	4.8	7.3	0.1	2.8	3	0	0	3	3	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
FAD_binding_3	PF01494.14	gi|332796174|ref|YP_004457674.1|	-	0.64	9.0	5.0	0.81	8.6	0.7	2.3	2	0	0	2	2	2	0	FAD	binding	domain
Imm16	PF15565.1	gi|332796175|ref|YP_004457675.1|	-	0.095	12.5	0.7	0.26	11.1	0.1	1.8	1	1	0	2	2	2	0	Immunity	protein	16
HSCB_C	PF07743.8	gi|332796175|ref|YP_004457675.1|	-	0.1	13.0	0.4	0.18	12.2	0.3	1.4	1	0	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
bact-PGI_C	PF10432.4	gi|332796176|ref|YP_004457676.1|	-	5.6e-30	104.0	0.1	2.9e-29	101.7	0.0	2.2	2	1	0	2	2	2	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|332796176|ref|YP_004457676.1|	-	6.7e-06	25.7	0.5	4.3e-05	23.1	0.4	2.1	1	1	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|332796176|ref|YP_004457676.1|	-	0.013	15.2	0.3	0.03	14.0	0.2	1.7	1	1	1	2	2	2	0	SIS	domain
BPS	PF08947.5	gi|332796176|ref|YP_004457676.1|	-	0.14	11.7	0.0	0.28	10.8	0.0	1.4	1	0	0	1	1	1	0	BPS	(Between	PH	and	SH2)
tRNA-synt_1e	PF01406.14	gi|332796177|ref|YP_004457677.1|	-	9.4e-127	422.2	0.6	1.7e-126	421.4	0.4	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|332796177|ref|YP_004457677.1|	-	8.4e-21	74.0	1.7	4.4e-10	38.7	0.2	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|332796177|ref|YP_004457677.1|	-	4.2e-12	44.8	0.7	3.5e-09	35.2	0.0	2.4	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.6	gi|332796177|ref|YP_004457677.1|	-	8.9e-07	29.0	2.2	4.6e-06	26.7	1.1	2.3	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1f	PF01921.13	gi|332796177|ref|YP_004457677.1|	-	1.1e-05	24.2	0.6	0.0002	20.1	0.0	2.4	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|332796177|ref|YP_004457677.1|	-	0.00084	18.2	3.3	0.0092	14.8	0.1	2.7	2	1	1	3	3	3	1	tRNA	synthetases	class	I	(R)
tRNA-synt_1c	PF00749.16	gi|332796177|ref|YP_004457677.1|	-	0.012	14.2	0.6	0.091	11.4	0.1	2.5	2	1	0	2	2	2	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1b	PF00579.20	gi|332796177|ref|YP_004457677.1|	-	0.07	12.2	0.1	0.12	11.4	0.1	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(W	and	Y)
NUDIX	PF00293.23	gi|332796178|ref|YP_004457678.1|	-	9.7e-21	73.8	0.0	1.1e-20	73.6	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|332796178|ref|YP_004457678.1|	-	0.0013	18.0	0.0	0.0018	17.7	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_2	PF13869.1	gi|332796178|ref|YP_004457678.1|	-	0.064	12.5	0.0	0.081	12.2	0.0	1.2	1	0	0	1	1	1	0	Nucleotide	hydrolase
DUF4100	PF13352.1	gi|332796178|ref|YP_004457678.1|	-	0.079	12.3	0.2	0.093	12.1	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4100)
ELFV_dehydrog	PF00208.16	gi|332796180|ref|YP_004457680.1|	-	4.5e-70	235.9	2.1	5.8e-70	235.6	1.5	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|332796180|ref|YP_004457680.1|	-	2.7e-49	166.0	0.0	5.3e-49	165.1	0.0	1.5	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|332796180|ref|YP_004457680.1|	-	0.00016	20.8	0.1	0.00028	20.0	0.1	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Oxidored_nitro	PF00148.14	gi|332796180|ref|YP_004457680.1|	-	0.045	12.3	0.0	0.069	11.7	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Bac_GDH	PF05088.7	gi|332796180|ref|YP_004457680.1|	-	0.063	10.6	0.1	0.082	10.2	0.1	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|332796180|ref|YP_004457680.1|	-	0.096	12.5	0.2	0.21	11.4	0.1	1.6	1	1	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|332796180|ref|YP_004457680.1|	-	0.12	12.6	0.0	0.28	11.4	0.0	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
DUF131	PF01998.12	gi|332796181|ref|YP_004457681.1|	-	2.6e-17	61.9	6.1	2.6e-17	61.9	4.2	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF3687	PF12459.3	gi|332796181|ref|YP_004457681.1|	-	0.0023	17.1	0.1	0.0023	17.1	0.1	1.9	2	0	0	2	2	1	1	D-Ala-teichoic	acid	biosynthesis	protein
Baculo_11_kDa	PF06143.6	gi|332796181|ref|YP_004457681.1|	-	0.018	14.3	0.2	0.4	10.0	0.2	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
Exosortase_EpsH	PF09721.5	gi|332796181|ref|YP_004457681.1|	-	0.02	14.1	0.2	0.026	13.7	0.1	1.2	1	0	0	1	1	1	0	Transmembrane	exosortase	(Exosortase_EpsH)
COPI_assoc	PF08507.5	gi|332796181|ref|YP_004457681.1|	-	0.033	13.8	1.7	2.3	7.8	0.0	2.1	2	0	0	2	2	2	0	COPI	associated	protein
DUF4131	PF13567.1	gi|332796181|ref|YP_004457681.1|	-	0.042	13.2	0.1	0.09	12.1	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
YfhO	PF09586.5	gi|332796181|ref|YP_004457681.1|	-	0.065	11.2	0.5	0.066	11.2	0.4	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
TctB	PF07331.6	gi|332796181|ref|YP_004457681.1|	-	0.071	12.7	2.1	0.2	11.3	1.5	1.6	1	1	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF4064	PF13273.1	gi|332796181|ref|YP_004457681.1|	-	0.076	13.1	5.5	0.32	11.1	4.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF3784	PF12650.2	gi|332796181|ref|YP_004457681.1|	-	0.099	12.5	4.3	0.37	10.7	0.8	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
ODV-E18	PF10717.4	gi|332796181|ref|YP_004457681.1|	-	0.12	11.7	1.5	2.1	7.8	0.6	2.1	2	0	0	2	2	2	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF3139	PF11337.3	gi|332796181|ref|YP_004457681.1|	-	0.13	12.5	1.9	1.6	9.0	0.6	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Nucleos_tra2_N	PF01773.15	gi|332796181|ref|YP_004457681.1|	-	0.14	12.5	1.3	1	9.7	0.5	2.1	2	0	0	2	2	2	0	Na+	dependent	nucleoside	transporter	N-terminus
Oxidored_q4	PF00507.14	gi|332796181|ref|YP_004457681.1|	-	0.17	11.6	5.7	0.42	10.4	0.7	2.1	2	0	0	2	2	2	0	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
DUF2905	PF11146.3	gi|332796181|ref|YP_004457681.1|	-	0.18	11.7	5.3	3.1	7.7	0.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2905)
SdpI	PF13630.1	gi|332796181|ref|YP_004457681.1|	-	0.33	10.7	12.2	0.44	10.2	3.3	2.1	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF4181	PF13789.1	gi|332796181|ref|YP_004457681.1|	-	0.59	10.0	8.7	0.22	11.4	1.3	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4181)
DUF2614	PF11023.3	gi|332796181|ref|YP_004457681.1|	-	0.88	9.3	5.5	3.3	7.5	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2614)
DUF1206	PF06724.6	gi|332796181|ref|YP_004457681.1|	-	0.9	9.3	5.6	1.6	8.5	0.3	2.4	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
Bax1-I	PF01027.15	gi|332796181|ref|YP_004457681.1|	-	1.1	8.7	6.6	3.9	7.0	4.6	1.8	1	1	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
DUF3753	PF12575.3	gi|332796181|ref|YP_004457681.1|	-	2.1	8.2	10.6	0.65	9.8	3.0	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
DUF2189	PF09955.4	gi|332796181|ref|YP_004457681.1|	-	2.3	8.1	7.0	33	4.4	4.6	2.6	1	1	1	2	2	2	0	Predicted	integral	membrane	protein	(DUF2189)
EamA	PF00892.15	gi|332796181|ref|YP_004457681.1|	-	4	7.4	8.4	1.1	9.3	0.8	2.1	2	0	0	2	2	2	0	EamA-like	transporter	family
Tetraspannin	PF00335.15	gi|332796181|ref|YP_004457681.1|	-	8.2	5.6	6.3	63	2.7	4.3	1.9	1	1	0	1	1	1	0	Tetraspanin	family
AAA_21	PF13304.1	gi|332796182|ref|YP_004457682.1|	-	5.6e-19	69.1	8.4	5.6e-19	69.1	5.9	2.8	2	2	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|332796182|ref|YP_004457682.1|	-	1.7e-18	66.9	10.6	4.4e-12	45.7	0.0	2.5	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332796182|ref|YP_004457682.1|	-	7.4e-06	26.4	2.9	7.4e-06	26.4	2.0	1.9	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|332796182|ref|YP_004457682.1|	-	9.4e-06	25.0	0.0	2.8e-05	23.4	0.0	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
adh_short_C2	PF13561.1	gi|332796183|ref|YP_004457683.1|	-	3.6e-30	105.4	0.0	4.3e-30	105.2	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|332796183|ref|YP_004457683.1|	-	8.8e-15	55.0	0.0	1.7e-14	54.1	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|332796183|ref|YP_004457683.1|	-	5.3e-05	22.9	0.0	9e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|332796183|ref|YP_004457683.1|	-	0.014	15.4	0.0	0.02	14.8	0.0	1.4	1	1	0	1	1	1	0	NADH(P)-binding
UDG	PF03167.14	gi|332796184|ref|YP_004457684.1|	-	9.7e-43	145.2	0.0	1.2e-42	144.9	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
MFS_1	PF07690.11	gi|332796185|ref|YP_004457685.1|	-	1.2e-44	152.4	48.1	2.1e-43	148.4	31.2	2.8	2	1	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332796185|ref|YP_004457685.1|	-	2.9e-11	42.6	10.9	2.9e-11	42.6	7.6	3.7	1	1	1	4	4	4	1	Sugar	(and	other)	transporter
TcpE	PF12648.2	gi|332796186|ref|YP_004457686.1|	-	1.2	9.3	8.9	0.53	10.4	3.0	2.5	2	1	1	3	3	3	0	TcpE	family
SecE	PF00584.15	gi|332796186|ref|YP_004457686.1|	-	1.5	8.4	5.7	9.9	5.8	0.1	2.5	2	0	0	2	2	2	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
7TMR-HDED	PF07697.6	gi|332796187|ref|YP_004457687.1|	-	0.026	14.2	0.3	0.029	14.1	0.2	1.0	1	0	0	1	1	1	0	7TM-HD	extracellular
IL10	PF00726.12	gi|332796187|ref|YP_004457687.1|	-	0.096	11.9	0.4	0.2	10.9	0.1	1.6	1	1	1	2	2	2	0	Interleukin	10
DUF4145	PF13643.1	gi|332796187|ref|YP_004457687.1|	-	0.099	12.5	2.8	0.46	10.3	0.3	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4145)
eIF3_p135	PF12807.2	gi|332796187|ref|YP_004457687.1|	-	0.13	12.1	0.9	0.14	12.1	0.6	1.1	1	0	0	1	1	1	0	Translation	initiation	factor	eIF3	subunit	135
TSC22	PF01166.13	gi|332796187|ref|YP_004457687.1|	-	0.32	11.0	2.7	9.1	6.3	0.1	2.8	2	1	2	4	4	4	0	TSC-22/dip/bun	family
TauE	PF01925.14	gi|332796188|ref|YP_004457688.1|	-	3.5e-51	173.9	39.1	4.7e-51	173.5	27.1	1.2	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
PEN-2	PF10251.4	gi|332796188|ref|YP_004457688.1|	-	0.049	13.8	0.0	0.12	12.6	0.0	1.6	1	0	0	1	1	1	0	Presenilin	enhancer-2	subunit	of	gamma	secretase
BatA	PF07584.6	gi|332796188|ref|YP_004457688.1|	-	0.057	13.6	0.2	0.057	13.6	0.1	2.2	3	0	0	3	3	3	0	Aerotolerance	regulator	N-terminal
Rick_17kDa_Anti	PF05433.10	gi|332796188|ref|YP_004457688.1|	-	1.3	8.7	12.9	0.19	11.4	1.3	3.0	3	0	0	3	3	3	0	Glycine	zipper	2TM	domain
Fe_dep_repr_C	PF02742.10	gi|332796189|ref|YP_004457689.1|	-	1.9e-19	69.1	0.0	3.6e-19	68.2	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HTH_45	PF14947.1	gi|332796189|ref|YP_004457689.1|	-	1.6e-06	27.8	0.0	2.7e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|332796189|ref|YP_004457689.1|	-	9e-06	25.5	0.0	1.7e-05	24.6	0.0	1.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|332796189|ref|YP_004457689.1|	-	0.00037	20.7	0.0	0.00058	20.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|332796189|ref|YP_004457689.1|	-	0.0012	18.4	0.0	0.0063	16.1	0.0	1.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|332796189|ref|YP_004457689.1|	-	0.003	17.1	0.0	0.0051	16.3	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR	PF01047.17	gi|332796189|ref|YP_004457689.1|	-	0.0032	17.1	0.0	0.0052	16.4	0.0	1.4	1	0	0	1	1	1	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|332796189|ref|YP_004457689.1|	-	0.013	15.0	0.0	0.023	14.2	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
MarR_2	PF12802.2	gi|332796189|ref|YP_004457689.1|	-	0.021	14.4	0.0	0.038	13.6	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HemN_C	PF06969.11	gi|332796189|ref|YP_004457689.1|	-	0.062	13.3	0.0	0.21	11.6	0.0	1.8	2	0	0	2	2	2	0	HemN	C-terminal	domain
Na_H_Exchanger	PF00999.16	gi|332796190|ref|YP_004457690.1|	-	5.4e-39	133.7	50.3	7e-39	133.4	34.9	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.23	gi|332796190|ref|YP_004457690.1|	-	9.7e-14	50.8	0.6	1.3e-06	28.0	0.2	2.5	2	0	0	2	2	2	2	CBS	domain
Methyltrans_RNA	PF04452.9	gi|332796190|ref|YP_004457690.1|	-	0.024	13.7	0.3	0.11	11.5	0.0	1.9	2	0	0	2	2	2	0	RNA	methyltransferase
DHDPS	PF00701.17	gi|332796191|ref|YP_004457691.1|	-	5.4e-64	215.5	0.0	6.3e-64	215.3	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
HTH_20	PF12840.2	gi|332796193|ref|YP_004457693.1|	-	5.3e-08	32.5	0.0	8.5e-08	31.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|332796193|ref|YP_004457693.1|	-	1.8e-07	30.3	0.2	4.9e-07	29.0	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
LexA_DNA_bind	PF01726.11	gi|332796193|ref|YP_004457693.1|	-	7e-07	28.7	0.0	1.9e-06	27.3	0.0	1.6	2	0	0	2	2	2	1	LexA	DNA	binding	domain
HTH_5	PF01022.15	gi|332796193|ref|YP_004457693.1|	-	7.3e-07	28.7	0.0	1.5e-06	27.7	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|332796193|ref|YP_004457693.1|	-	9.9e-05	21.9	0.2	0.00018	21.1	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|332796193|ref|YP_004457693.1|	-	0.0011	18.6	0.0	0.0018	17.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_12	PF08461.5	gi|332796193|ref|YP_004457693.1|	-	0.0012	18.5	0.1	0.0023	17.5	0.0	1.5	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_28	PF13518.1	gi|332796193|ref|YP_004457693.1|	-	0.0029	17.5	0.0	0.092	12.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|332796193|ref|YP_004457693.1|	-	0.0034	17.0	0.1	0.017	14.7	0.0	1.9	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|332796193|ref|YP_004457693.1|	-	0.0035	16.9	0.0	0.0075	15.8	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
Fe_dep_repress	PF01325.14	gi|332796193|ref|YP_004457693.1|	-	0.0051	16.7	0.1	0.011	15.7	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF1495	PF07381.6	gi|332796193|ref|YP_004457693.1|	-	0.0077	15.8	0.0	0.015	14.9	0.0	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_IclR	PF09339.5	gi|332796193|ref|YP_004457693.1|	-	0.015	14.8	0.0	0.024	14.2	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|332796193|ref|YP_004457693.1|	-	0.019	14.8	0.0	0.041	13.7	0.0	1.6	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Peptidase_C74	PF12387.3	gi|332796193|ref|YP_004457693.1|	-	0.065	12.4	0.1	0.084	12.0	0.1	1.3	1	0	0	1	1	1	0	Pestivirus	NS2	peptidase
HTH_27	PF13463.1	gi|332796193|ref|YP_004457693.1|	-	0.068	13.5	0.0	0.13	12.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF996	PF06195.8	gi|332796194|ref|YP_004457694.1|	-	0.061	13.3	7.1	0.1	12.6	4.9	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF996)
DUF2975	PF11188.3	gi|332796194|ref|YP_004457694.1|	-	0.32	10.7	10.0	0.32	10.7	1.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2975)
DUF2569	PF10754.4	gi|332796194|ref|YP_004457694.1|	-	0.45	10.7	8.8	0.68	10.1	6.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2569)
ABC2_membrane_5	PF13346.1	gi|332796194|ref|YP_004457694.1|	-	0.51	9.5	14.7	0.59	9.3	10.2	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
7TM-7TMR_HD	PF07698.6	gi|332796194|ref|YP_004457694.1|	-	2.3	7.6	12.9	0.41	10.0	4.2	1.9	1	1	1	2	2	2	0	7TM	receptor	with	intracellular	HD	hydrolase
TerC	PF03741.11	gi|332796194|ref|YP_004457694.1|	-	4.9	6.5	9.8	0.45	9.9	2.0	1.9	1	1	1	2	2	2	0	Integral	membrane	protein	TerC	family
PGG	PF13962.1	gi|332796194|ref|YP_004457694.1|	-	7.6	6.1	7.4	2.7	7.6	3.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function
B12-binding	PF02310.14	gi|332796195|ref|YP_004457695.1|	-	1.6e-20	73.1	0.3	2.1e-20	72.8	0.2	1.2	1	1	0	1	1	1	1	B12	binding	domain
Nitro_FeMo-Co	PF02579.12	gi|332796195|ref|YP_004457695.1|	-	0.024	14.6	0.4	10	6.3	0.0	2.8	2	1	1	3	3	3	0	Dinitrogenase	iron-molybdenum	cofactor
TPP_enzyme_N	PF02776.13	gi|332796195|ref|YP_004457695.1|	-	0.11	12.0	0.1	8.6	5.8	0.0	2.4	3	0	0	3	3	3	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
ArgK	PF03308.11	gi|332796196|ref|YP_004457696.1|	-	8e-86	287.1	3.5	9.6e-86	286.8	2.5	1.0	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|332796196|ref|YP_004457696.1|	-	1.5e-09	37.5	0.7	4.6e-09	35.9	0.5	1.8	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
DUF87	PF01935.12	gi|332796196|ref|YP_004457696.1|	-	8.5e-05	22.4	4.3	0.00025	20.9	0.4	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
GTP_EFTU	PF00009.22	gi|332796196|ref|YP_004457696.1|	-	0.00019	20.9	0.3	0.19	11.1	0.0	2.5	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
KAP_NTPase	PF07693.9	gi|332796196|ref|YP_004457696.1|	-	0.00034	19.7	0.2	0.0015	17.6	0.1	1.9	1	1	0	1	1	1	1	KAP	family	P-loop	domain
NTPase_1	PF03266.10	gi|332796196|ref|YP_004457696.1|	-	0.0007	19.3	1.6	0.00086	19.0	0.1	1.8	2	0	0	2	2	2	1	NTPase
AAA_17	PF13207.1	gi|332796196|ref|YP_004457696.1|	-	0.00076	20.2	1.1	0.0015	19.3	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|332796196|ref|YP_004457696.1|	-	0.00078	19.7	1.1	0.00082	19.6	0.1	1.6	2	0	0	2	2	1	1	ABC	transporter
AAA_18	PF13238.1	gi|332796196|ref|YP_004457696.1|	-	0.0026	18.0	1.5	0.0051	17.1	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|332796196|ref|YP_004457696.1|	-	0.0027	17.2	0.2	0.0035	16.8	0.1	1.5	1	1	0	1	1	1	1	AAA-like	domain
AAA_16	PF13191.1	gi|332796196|ref|YP_004457696.1|	-	0.0029	17.6	0.0	0.0056	16.6	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
TrwB_AAD_bind	PF10412.4	gi|332796196|ref|YP_004457696.1|	-	0.0034	16.0	0.1	0.0052	15.4	0.1	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
MMR_HSR1	PF01926.18	gi|332796196|ref|YP_004457696.1|	-	0.004	17.1	3.1	0.0096	15.8	2.1	2.1	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Arch_ATPase	PF01637.13	gi|332796196|ref|YP_004457696.1|	-	0.005	16.5	1.4	0.13	11.9	0.0	2.2	2	0	0	2	2	2	1	Archaeal	ATPase
ATP_bind_1	PF03029.12	gi|332796196|ref|YP_004457696.1|	-	0.0055	16.2	0.0	0.015	14.8	0.0	1.7	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
MobB	PF03205.9	gi|332796196|ref|YP_004457696.1|	-	0.0067	16.1	0.1	0.02	14.5	0.0	1.8	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|332796196|ref|YP_004457696.1|	-	0.014	14.8	0.0	0.077	12.4	0.0	2.1	1	1	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
DDR	PF08841.5	gi|332796196|ref|YP_004457696.1|	-	0.014	14.2	0.6	0.023	13.5	0.4	1.3	1	0	0	1	1	1	0	Diol	dehydratase	reactivase	ATPase-like	domain
AAA_14	PF13173.1	gi|332796196|ref|YP_004457696.1|	-	0.015	15.1	0.0	0.046	13.6	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|332796196|ref|YP_004457696.1|	-	0.016	14.7	0.1	0.029	13.9	0.1	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
DUF258	PF03193.11	gi|332796196|ref|YP_004457696.1|	-	0.02	14.1	0.1	0.031	13.4	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Zeta_toxin	PF06414.7	gi|332796196|ref|YP_004457696.1|	-	0.025	13.6	0.1	0.057	12.5	0.1	1.6	1	0	0	1	1	1	0	Zeta	toxin
CbiA	PF01656.18	gi|332796196|ref|YP_004457696.1|	-	0.03	13.7	0.6	0.089	12.1	0.3	1.9	1	1	1	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|332796196|ref|YP_004457696.1|	-	0.031	14.4	0.0	0.088	12.9	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|332796196|ref|YP_004457696.1|	-	0.038	12.8	0.2	0.038	12.8	0.2	1.7	2	0	0	2	2	2	0	NB-ARC	domain
DUF2075	PF09848.4	gi|332796196|ref|YP_004457696.1|	-	0.045	12.7	0.5	0.063	12.2	0.0	1.5	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
DUF815	PF05673.8	gi|332796196|ref|YP_004457696.1|	-	0.045	12.6	0.7	0.08	11.8	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
KTI12	PF08433.5	gi|332796196|ref|YP_004457696.1|	-	0.067	12.3	0.1	0.18	11.0	0.0	1.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
T2SE	PF00437.15	gi|332796196|ref|YP_004457696.1|	-	0.067	12.0	0.1	0.13	11.0	0.0	1.6	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|332796196|ref|YP_004457696.1|	-	0.082	12.4	0.3	0.2	11.1	0.2	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332796196|ref|YP_004457696.1|	-	0.087	12.2	0.3	0.23	10.9	0.0	1.8	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_19	PF13245.1	gi|332796196|ref|YP_004457696.1|	-	0.12	12.0	0.0	0.4	10.4	0.0	1.9	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF463	PF04317.7	gi|332796196|ref|YP_004457696.1|	-	0.13	10.7	0.0	0.22	10.0	0.0	1.3	1	0	0	1	1	1	0	YcjX-like	family,	DUF463
zf-C4H2	PF10146.4	gi|332796196|ref|YP_004457696.1|	-	1.1	9.2	8.1	0.23	11.4	3.3	1.5	2	0	0	2	2	1	0	Zinc	finger-containing	protein
DUF2250	PF10007.4	gi|332796197|ref|YP_004457697.1|	-	7.4e-69	227.7	16.3	1.1e-38	130.9	3.5	2.0	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|332796197|ref|YP_004457697.1|	-	0.00011	21.8	1.8	0.0033	16.9	0.1	2.5	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
DUF4393	PF14337.1	gi|332796197|ref|YP_004457697.1|	-	0.00016	21.1	0.9	0.16	11.3	0.1	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4393)
TrmB	PF01978.14	gi|332796197|ref|YP_004457697.1|	-	0.00027	20.5	2.9	0.036	13.7	0.0	3.4	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|332796197|ref|YP_004457697.1|	-	0.0034	17.1	3.8	0.11	12.2	0.5	3.3	2	1	0	2	2	2	1	Winged	helix-turn-helix
HemN_C	PF06969.11	gi|332796197|ref|YP_004457697.1|	-	0.0043	17.0	0.3	1.3	9.0	0.1	3.0	2	0	0	2	2	2	1	HemN	C-terminal	domain
MarR_2	PF12802.2	gi|332796197|ref|YP_004457697.1|	-	0.006	16.2	0.1	0.12	12.0	0.0	2.5	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|332796197|ref|YP_004457697.1|	-	0.015	15.5	3.8	0.95	9.8	0.1	3.8	3	2	0	3	3	3	0	Winged	helix	DNA-binding	domain
Phage_rep_org_N	PF09681.5	gi|332796197|ref|YP_004457697.1|	-	0.036	13.6	0.2	7.4	6.1	0.0	2.3	2	0	0	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
MarR	PF01047.17	gi|332796197|ref|YP_004457697.1|	-	0.065	12.9	0.6	1	9.0	0.0	2.7	3	0	0	3	3	3	0	MarR	family
DUF2806	PF10987.3	gi|332796197|ref|YP_004457697.1|	-	0.07	12.6	1.1	0.43	10.0	0.1	2.3	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF2806)
Peptidase_M19	PF01244.16	gi|332796197|ref|YP_004457697.1|	-	0.096	11.6	0.0	0.17	10.7	0.0	1.7	1	1	1	2	2	2	0	Membrane	dipeptidase	(Peptidase	family	M19)
MSP7_C	PF12948.2	gi|332796197|ref|YP_004457697.1|	-	0.14	12.4	2.1	0.81	9.9	0.1	2.3	2	0	0	2	2	2	0	MSP7-like	protein	C-terminal	domain
PadR	PF03551.9	gi|332796197|ref|YP_004457697.1|	-	1.3	8.8	8.4	6.4	6.6	0.7	4.3	2	2	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
Abhydrolase_6	PF12697.2	gi|332796198|ref|YP_004457698.1|	-	8.2e-24	84.7	0.0	8.4e-18	65.0	0.0	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|332796198|ref|YP_004457698.1|	-	8.6e-19	67.7	0.0	1e-18	67.4	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|332796198|ref|YP_004457698.1|	-	3.1e-10	40.0	0.1	1.6e-07	31.1	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Abhydrolase_4	PF08386.5	gi|332796198|ref|YP_004457698.1|	-	0.00095	19.0	0.0	0.0016	18.3	0.0	1.3	1	0	0	1	1	1	1	TAP-like	protein
Hydrolase_4	PF12146.3	gi|332796198|ref|YP_004457698.1|	-	0.0011	18.7	0.0	0.0023	17.7	0.0	1.6	1	0	0	1	1	1	1	Putative	lysophospholipase
DUF1057	PF06342.7	gi|332796198|ref|YP_004457698.1|	-	0.0013	17.6	0.0	0.0017	17.2	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Abhydrolase_2	PF02230.11	gi|332796198|ref|YP_004457698.1|	-	0.0015	18.0	0.0	0.0021	17.5	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Ndr	PF03096.9	gi|332796198|ref|YP_004457698.1|	-	0.002	16.6	0.0	0.003	16.0	0.0	1.2	1	0	0	1	1	1	1	Ndr	family
Pyr_redox_2	PF07992.9	gi|332796199|ref|YP_004457699.1|	-	2.7e-10	40.4	0.0	4e-10	39.9	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332796199|ref|YP_004457699.1|	-	0.029	14.7	0.1	2.2	8.7	0.0	2.9	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|332796199|ref|YP_004457699.1|	-	0.093	11.6	0.0	13	4.6	0.0	2.4	3	0	0	3	3	3	0	Lycopene	cyclase	protein
DUF1641	PF07849.6	gi|332796200|ref|YP_004457700.1|	-	2.3e-13	49.5	0.2	2.3e-13	49.5	0.1	2.6	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1641)
TMP	PF05017.9	gi|332796200|ref|YP_004457700.1|	-	0.46	11.1	2.5	36	5.4	0.0	4.2	3	0	0	3	3	3	0	TMP	repeat
AAA_26	PF13500.1	gi|332796201|ref|YP_004457701.1|	-	0.023	14.2	0.0	0.23	11.0	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|332796201|ref|YP_004457701.1|	-	0.045	13.4	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Proteasome	PF00227.21	gi|332796202|ref|YP_004457702.1|	-	4.2e-50	169.6	0.6	4.8e-50	169.4	0.4	1.0	1	0	0	1	1	1	1	Proteasome	subunit
PBP	PF01161.15	gi|332796203|ref|YP_004457703.1|	-	2.2e-40	137.8	0.0	2.5e-40	137.6	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Rep_fac_C	PF08542.6	gi|332796204|ref|YP_004457704.1|	-	2.2e-25	88.4	0.5	6.1e-25	87.0	0.1	2.0	2	0	0	2	2	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|332796204|ref|YP_004457704.1|	-	1.2e-15	57.8	0.0	3.4e-15	56.4	0.0	1.8	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|332796204|ref|YP_004457704.1|	-	6.1e-14	51.9	0.0	1.6e-11	44.1	0.0	2.4	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|332796204|ref|YP_004457704.1|	-	1.6e-11	43.5	0.0	0.00013	20.7	0.0	2.1	1	1	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|332796204|ref|YP_004457704.1|	-	7.7e-08	31.6	0.1	2.6e-07	29.9	0.0	1.8	2	1	1	3	3	3	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|332796204|ref|YP_004457704.1|	-	5.5e-07	29.7	0.1	0.00049	20.2	0.0	2.8	2	1	0	2	2	1	1	AAA	domain
AAA_14	PF13173.1	gi|332796204|ref|YP_004457704.1|	-	8.4e-07	28.9	0.1	4.7e-06	26.5	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
TIP49	PF06068.8	gi|332796204|ref|YP_004457704.1|	-	3.8e-06	25.8	0.0	0.0027	16.4	0.0	2.4	1	1	1	2	2	2	2	TIP49	C-terminus
AAA_16	PF13191.1	gi|332796204|ref|YP_004457704.1|	-	6.7e-06	26.2	0.0	0.0007	19.6	0.0	2.5	2	1	1	3	3	2	1	AAA	ATPase	domain
DNA_pol3_delta	PF06144.8	gi|332796204|ref|YP_004457704.1|	-	8.4e-06	25.4	0.3	0.00016	21.2	0.0	2.3	2	1	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
IstB_IS21	PF01695.12	gi|332796204|ref|YP_004457704.1|	-	2e-05	24.0	0.0	4.6e-05	22.9	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_3	PF07726.6	gi|332796204|ref|YP_004457704.1|	-	2.7e-05	23.7	0.0	5.4e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|332796204|ref|YP_004457704.1|	-	7.2e-05	22.4	0.0	0.00014	21.5	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|332796204|ref|YP_004457704.1|	-	0.00014	21.9	0.0	0.0012	18.8	0.0	2.4	2	1	0	2	2	2	1	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|332796204|ref|YP_004457704.1|	-	0.00018	21.7	0.0	0.0025	18.1	0.0	2.5	2	1	1	3	3	3	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332796204|ref|YP_004457704.1|	-	0.0002	20.8	0.0	0.0024	17.3	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
Arch_ATPase	PF01637.13	gi|332796204|ref|YP_004457704.1|	-	0.00024	20.8	0.1	0.0077	15.9	0.0	2.2	1	1	1	2	2	2	1	Archaeal	ATPase
AAA_11	PF13086.1	gi|332796204|ref|YP_004457704.1|	-	0.00055	19.5	0.0	0.00075	19.1	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|332796204|ref|YP_004457704.1|	-	0.001	18.9	0.0	0.01	15.6	0.0	2.3	2	1	1	3	3	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_25	PF13481.1	gi|332796204|ref|YP_004457704.1|	-	0.0011	18.3	0.5	0.0051	16.2	0.1	2.2	2	1	0	2	2	2	1	AAA	domain
SNF2_N	PF00176.18	gi|332796204|ref|YP_004457704.1|	-	0.0012	17.6	0.0	0.55	8.9	0.0	2.2	1	1	1	2	2	2	2	SNF2	family	N-terminal	domain
Mg_chelatase	PF01078.16	gi|332796204|ref|YP_004457704.1|	-	0.0013	17.8	0.1	0.065	12.3	0.0	2.4	1	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|332796204|ref|YP_004457704.1|	-	0.0014	18.3	0.1	0.011	15.5	0.0	2.5	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|332796204|ref|YP_004457704.1|	-	0.0018	19.0	0.1	0.006	17.3	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|332796204|ref|YP_004457704.1|	-	0.0026	16.7	0.0	0.0058	15.5	0.0	1.6	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|332796204|ref|YP_004457704.1|	-	0.0037	16.5	0.0	0.36	10.0	0.0	2.4	2	0	0	2	2	2	1	PhoH-like	protein
AAA_10	PF12846.2	gi|332796204|ref|YP_004457704.1|	-	0.0054	16.2	0.2	0.23	10.8	0.1	2.7	1	1	0	1	1	1	1	AAA-like	domain
DUF2075	PF09848.4	gi|332796204|ref|YP_004457704.1|	-	0.0062	15.5	0.1	0.039	12.9	0.0	2.0	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
DUF815	PF05673.8	gi|332796204|ref|YP_004457704.1|	-	0.0066	15.4	0.0	0.014	14.3	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
DEAD	PF00270.24	gi|332796204|ref|YP_004457704.1|	-	0.0089	15.5	0.1	3.8	6.9	0.0	2.6	1	1	1	2	2	2	0	DEAD/DEAH	box	helicase
Sigma54_activat	PF00158.21	gi|332796204|ref|YP_004457704.1|	-	0.012	15.0	0.0	0.38	10.2	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_33	PF13671.1	gi|332796204|ref|YP_004457704.1|	-	0.034	14.0	0.1	0.081	12.7	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.5	gi|332796204|ref|YP_004457704.1|	-	0.039	13.1	0.0	0.08	12.1	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_24	PF13479.1	gi|332796204|ref|YP_004457704.1|	-	0.048	13.2	0.0	0.13	11.8	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|332796204|ref|YP_004457704.1|	-	0.052	12.6	0.0	0.18	10.8	0.0	1.9	2	0	0	2	2	2	0	Zeta	toxin
AAA_28	PF13521.1	gi|332796204|ref|YP_004457704.1|	-	0.06	13.3	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Sec16_C	PF12931.2	gi|332796204|ref|YP_004457704.1|	-	0.089	12.5	0.0	0.19	11.4	0.0	1.5	2	0	0	2	2	2	0	Sec23-binding	domain	of	Sec16
Viral_helicase1	PF01443.13	gi|332796204|ref|YP_004457704.1|	-	0.093	12.2	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RNA_helicase	PF00910.17	gi|332796204|ref|YP_004457704.1|	-	0.093	12.9	0.0	0.19	11.8	0.0	1.6	1	1	0	1	1	1	0	RNA	helicase
NTPase_1	PF03266.10	gi|332796204|ref|YP_004457704.1|	-	0.13	11.9	0.6	2	8.1	0.0	2.7	2	1	1	3	3	3	0	NTPase
AAA	PF00004.24	gi|332796205|ref|YP_004457705.1|	-	2.9e-15	56.6	0.0	6.9e-15	55.4	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|332796205|ref|YP_004457705.1|	-	4.6e-11	42.2	0.0	3.4e-10	39.3	0.0	2.0	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Rad17	PF03215.10	gi|332796205|ref|YP_004457705.1|	-	1.7e-08	33.6	0.1	4.3e-06	25.6	0.0	2.3	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
AAA_17	PF13207.1	gi|332796205|ref|YP_004457705.1|	-	5.9e-08	33.5	0.2	4.8e-07	30.6	0.1	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|332796205|ref|YP_004457705.1|	-	6.1e-08	32.4	0.0	1.2e-07	31.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|332796205|ref|YP_004457705.1|	-	9.4e-08	32.2	0.0	1.9e-05	24.8	0.0	3.3	2	1	0	2	2	2	1	AAA	domain
TIP49	PF06068.8	gi|332796205|ref|YP_004457705.1|	-	1.8e-07	30.2	0.1	0.0064	15.2	0.0	2.3	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_14	PF13173.1	gi|332796205|ref|YP_004457705.1|	-	2e-07	30.9	0.0	5.7e-07	29.4	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|332796205|ref|YP_004457705.1|	-	2.7e-07	29.7	0.0	8.5e-07	28.1	0.0	1.8	2	0	0	2	2	1	1	Protein	of	unknown	function	(DUF815)
AAA_16	PF13191.1	gi|332796205|ref|YP_004457705.1|	-	3.9e-07	30.2	0.0	1e-06	28.8	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|332796205|ref|YP_004457705.1|	-	4.6e-05	23.0	0.0	0.00012	21.7	0.0	1.8	2	0	0	2	2	1	1	Part	of	AAA	domain
DNA_pol3_delta	PF06144.8	gi|332796205|ref|YP_004457705.1|	-	0.00014	21.4	1.2	0.00071	19.1	0.0	2.7	3	1	0	4	4	4	1	DNA	polymerase	III,	delta	subunit
AAA_25	PF13481.1	gi|332796205|ref|YP_004457705.1|	-	0.00016	21.1	0.0	0.00031	20.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|332796205|ref|YP_004457705.1|	-	0.00021	20.7	0.0	0.00038	19.9	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.1	gi|332796205|ref|YP_004457705.1|	-	0.00056	19.7	0.0	0.0011	18.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|332796205|ref|YP_004457705.1|	-	0.00091	19.3	0.0	0.0047	17.0	0.0	2.3	2	0	0	2	2	1	1	RNA	helicase
Mg_chelatase	PF01078.16	gi|332796205|ref|YP_004457705.1|	-	0.00097	18.3	0.0	0.0018	17.5	0.0	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|332796205|ref|YP_004457705.1|	-	0.001	19.0	0.0	0.0024	17.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|332796205|ref|YP_004457705.1|	-	0.001	18.7	0.2	0.027	14.1	0.0	2.9	1	1	2	3	3	3	1	NACHT	domain
Parvo_NS1	PF01057.12	gi|332796205|ref|YP_004457705.1|	-	0.0012	17.8	0.0	0.0029	16.5	0.0	1.6	2	0	0	2	2	1	1	Parvovirus	non-structural	protein	NS1
AAA_24	PF13479.1	gi|332796205|ref|YP_004457705.1|	-	0.0012	18.5	0.0	0.0029	17.1	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796205|ref|YP_004457705.1|	-	0.0012	19.1	0.0	0.0012	19.1	0.0	2.8	4	0	0	4	4	2	1	AAA	domain
NB-ARC	PF00931.17	gi|332796205|ref|YP_004457705.1|	-	0.002	17.0	0.0	0.0041	16.0	0.0	1.5	1	0	0	1	1	1	1	NB-ARC	domain
AAA_2	PF07724.9	gi|332796205|ref|YP_004457705.1|	-	0.0027	17.6	0.0	0.0063	16.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
PPV_E1_C	PF00519.12	gi|332796205|ref|YP_004457705.1|	-	0.0032	16.1	0.0	0.0053	15.4	0.0	1.2	1	0	0	1	1	1	1	Papillomavirus	helicase
Arch_ATPase	PF01637.13	gi|332796205|ref|YP_004457705.1|	-	0.0035	17.0	0.1	0.036	13.7	0.0	2.7	2	1	0	2	2	2	1	Archaeal	ATPase
Sigma54_activ_2	PF14532.1	gi|332796205|ref|YP_004457705.1|	-	0.0045	17.0	0.0	0.0086	16.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-54	interaction	domain
KaiC	PF06745.8	gi|332796205|ref|YP_004457705.1|	-	0.0098	15.0	0.0	0.018	14.1	0.0	1.5	1	0	0	1	1	1	1	KaiC
DUF2075	PF09848.4	gi|332796205|ref|YP_004457705.1|	-	0.021	13.7	0.4	0.084	11.8	0.0	2.2	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Zeta_toxin	PF06414.7	gi|332796205|ref|YP_004457705.1|	-	0.023	13.7	0.0	0.047	12.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activat	PF00158.21	gi|332796205|ref|YP_004457705.1|	-	0.031	13.7	0.0	0.21	11.0	0.0	2.1	1	1	1	2	2	2	0	Sigma-54	interaction	domain
PhoH	PF02562.11	gi|332796205|ref|YP_004457705.1|	-	0.034	13.3	0.0	0.09	11.9	0.0	1.7	2	0	0	2	2	1	0	PhoH-like	protein
ABC_tran	PF00005.22	gi|332796205|ref|YP_004457705.1|	-	0.034	14.4	0.4	0.12	12.6	0.0	2.1	3	0	0	3	3	1	0	ABC	transporter
T2SE	PF00437.15	gi|332796205|ref|YP_004457705.1|	-	0.045	12.6	0.0	0.092	11.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_11	PF13086.1	gi|332796205|ref|YP_004457705.1|	-	0.06	12.9	0.3	0.12	11.9	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|332796205|ref|YP_004457705.1|	-	0.061	12.8	0.0	0.13	11.7	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
SRP54	PF00448.17	gi|332796205|ref|YP_004457705.1|	-	0.061	12.7	0.1	0.7	9.3	0.0	2.3	2	1	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
UPF0079	PF02367.12	gi|332796205|ref|YP_004457705.1|	-	0.065	12.8	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_30	PF13604.1	gi|332796205|ref|YP_004457705.1|	-	0.1	12.1	0.1	0.41	10.1	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|332796205|ref|YP_004457705.1|	-	0.11	12.0	0.0	0.19	11.1	0.0	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_23	PF13476.1	gi|332796205|ref|YP_004457705.1|	-	0.21	11.8	0.0	0.21	11.8	0.0	2.6	2	1	0	2	2	1	0	AAA	domain
AAA_21	PF13304.1	gi|332796205|ref|YP_004457705.1|	-	0.23	11.3	4.8	0.44	10.4	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
MoaC	PF01967.16	gi|332796206|ref|YP_004457706.1|	-	4.2e-52	175.4	7.1	4.7e-52	175.2	4.9	1.0	1	0	0	1	1	1	1	MoaC	family
CppA_N	PF14506.1	gi|332796206|ref|YP_004457706.1|	-	0.38	10.4	1.9	1.1	8.9	0.1	2.0	2	0	0	2	2	2	0	CppA	N-terminal
Cdc6_C	PF09079.6	gi|332796207|ref|YP_004457707.1|	-	1.1e-22	79.5	0.0	3.3e-22	78.0	0.0	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|332796207|ref|YP_004457707.1|	-	1.2e-15	57.8	0.2	5.1e-14	52.5	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|332796207|ref|YP_004457707.1|	-	1.6e-05	24.9	0.0	0.0013	18.7	0.0	2.8	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|332796207|ref|YP_004457707.1|	-	0.00018	21.7	0.0	0.00052	20.2	0.0	1.8	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|332796207|ref|YP_004457707.1|	-	0.00078	18.9	0.0	0.0018	17.7	0.0	1.5	1	0	0	1	1	1	1	Sigma-54	interaction	domain
FtsK_SpoIIIE	PF01580.13	gi|332796207|ref|YP_004457707.1|	-	0.0013	18.2	0.0	1.1	8.7	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_19	PF13245.1	gi|332796207|ref|YP_004457707.1|	-	0.0014	18.3	0.1	0.0037	16.9	0.1	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
T2SE	PF00437.15	gi|332796207|ref|YP_004457707.1|	-	0.0029	16.5	0.1	0.0051	15.7	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|332796207|ref|YP_004457707.1|	-	0.0047	16.6	0.0	0.011	15.4	0.0	1.6	2	0	0	2	2	2	1	NACHT	domain
IstB_IS21	PF01695.12	gi|332796207|ref|YP_004457707.1|	-	0.008	15.6	0.5	0.23	10.8	0.0	2.6	3	0	0	3	3	3	1	IstB-like	ATP	binding	protein
DUF853	PF05872.7	gi|332796207|ref|YP_004457707.1|	-	0.0083	14.5	0.2	0.033	12.5	0.0	1.8	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
AAA_17	PF13207.1	gi|332796207|ref|YP_004457707.1|	-	0.009	16.8	0.6	0.026	15.3	0.1	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796207|ref|YP_004457707.1|	-	0.032	14.5	0.2	0.099	12.9	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|332796207|ref|YP_004457707.1|	-	0.048	12.6	0.0	0.075	11.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
KaiC	PF06745.8	gi|332796207|ref|YP_004457707.1|	-	0.055	12.5	0.0	0.11	11.5	0.0	1.5	1	0	0	1	1	1	0	KaiC
NB-ARC	PF00931.17	gi|332796207|ref|YP_004457707.1|	-	0.061	12.1	0.0	0.1	11.4	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
DUF87	PF01935.12	gi|332796207|ref|YP_004457707.1|	-	0.066	13.0	1.5	0.18	11.5	0.3	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
KTI12	PF08433.5	gi|332796207|ref|YP_004457707.1|	-	0.072	12.2	0.2	9.4	5.3	0.0	2.3	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|332796207|ref|YP_004457707.1|	-	0.078	12.6	2.0	0.2	11.3	0.3	2.3	3	0	0	3	3	2	0	NTPase
MobB	PF03205.9	gi|332796207|ref|YP_004457707.1|	-	0.1	12.3	0.4	0.2	11.3	0.3	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DAP3	PF10236.4	gi|332796207|ref|YP_004457707.1|	-	0.11	11.4	0.1	0.35	9.7	0.0	1.8	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
THUMP	PF02926.12	gi|332796208|ref|YP_004457708.1|	-	3.6e-13	49.6	0.2	4.4e-13	49.3	0.1	1.1	1	0	0	1	1	1	1	THUMP	domain
Sld5	PF05916.6	gi|332796209|ref|YP_004457709.1|	-	3.5e-08	33.6	1.4	5.1e-08	33.1	1.0	1.2	1	0	0	1	1	1	1	GINS	complex	protein
Stn1	PF10451.4	gi|332796209|ref|YP_004457709.1|	-	0.036	12.8	0.5	0.046	12.5	0.3	1.3	1	1	0	1	1	1	0	Telomere	regulation	protein	Stn1
MCM	PF00493.18	gi|332796210|ref|YP_004457710.1|	-	9.1e-135	448.7	0.1	1.2e-134	448.2	0.1	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|332796210|ref|YP_004457710.1|	-	2.5e-16	60.2	1.4	9e-16	58.4	0.5	2.3	2	0	0	2	2	2	1	MCM	N-terminal	domain
AAA_5	PF07728.9	gi|332796210|ref|YP_004457710.1|	-	1.3e-08	34.7	0.0	4.4e-08	32.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|332796210|ref|YP_004457710.1|	-	1.2e-06	27.7	0.0	0.0001	21.5	0.0	2.3	1	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|332796210|ref|YP_004457710.1|	-	2.4e-05	23.9	0.0	4.8e-05	22.9	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|332796210|ref|YP_004457710.1|	-	7.6e-05	22.2	0.1	0.00048	19.6	0.1	2.0	1	1	0	1	1	1	1	Sigma-54	interaction	domain
DUF3987	PF13148.1	gi|332796210|ref|YP_004457710.1|	-	0.0088	14.6	0.1	0.73	8.3	0.0	2.2	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3987)
Herpes_LMP1	PF05297.6	gi|332796212|ref|YP_004457712.1|	-	0.39	9.6	8.3	0.46	9.3	5.7	1.0	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
PrgI	PF12666.2	gi|332796212|ref|YP_004457712.1|	-	1.4	9.0	5.6	1.7	8.8	0.7	2.1	2	0	0	2	2	2	0	PrgI	family	protein
MpPF26	PF07666.6	gi|332796212|ref|YP_004457712.1|	-	9.6	6.1	15.7	2.7e+02	1.4	10.9	2.0	1	1	0	1	1	1	0	M	penetrans	paralogue	family	26
DUF46	PF01864.12	gi|332796213|ref|YP_004457713.1|	-	8.8e-41	139.6	7.6	4.6e-40	137.3	5.2	1.8	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|332796213|ref|YP_004457713.1|	-	2.6e-05	24.0	2.6	2.6e-05	24.0	1.8	2.1	2	0	0	2	2	2	1	Cytidylyltransferase	family
KaiC	PF06745.8	gi|332796214|ref|YP_004457714.1|	-	1.7e-05	24.0	1.0	0.038	13.1	0.1	2.2	1	1	1	2	2	2	2	KaiC
AAA_22	PF13401.1	gi|332796214|ref|YP_004457714.1|	-	0.00026	21.1	0.1	0.00064	19.8	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|332796214|ref|YP_004457714.1|	-	0.00059	19.5	0.2	0.00067	19.4	0.1	1.2	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_25	PF13481.1	gi|332796214|ref|YP_004457714.1|	-	0.0013	18.1	0.3	0.075	12.4	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|332796214|ref|YP_004457714.1|	-	0.0018	18.2	0.0	0.0023	17.9	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|332796214|ref|YP_004457714.1|	-	0.0033	16.3	0.0	0.0066	15.3	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
AAA_19	PF13245.1	gi|332796214|ref|YP_004457714.1|	-	0.0083	15.8	0.0	0.014	15.1	0.0	1.3	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA	PF00004.24	gi|332796214|ref|YP_004457714.1|	-	0.0089	16.2	0.0	0.012	15.8	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|332796214|ref|YP_004457714.1|	-	0.01	14.8	0.0	0.013	14.4	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|332796214|ref|YP_004457714.1|	-	0.019	14.8	0.0	0.043	13.7	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|332796214|ref|YP_004457714.1|	-	0.096	12.1	0.0	0.17	11.3	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
PhoH	PF02562.11	gi|332796214|ref|YP_004457714.1|	-	0.098	11.8	0.3	0.47	9.6	0.0	2.1	3	0	0	3	3	3	0	PhoH-like	protein
DUF1450	PF07293.6	gi|332796214|ref|YP_004457714.1|	-	0.14	12.1	0.1	0.71	9.8	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1450)
NACHT	PF05729.7	gi|332796214|ref|YP_004457714.1|	-	0.14	11.7	0.2	0.75	9.4	0.2	2.1	1	1	0	1	1	1	0	NACHT	domain
Thymidylate_kin	PF02223.12	gi|332796217|ref|YP_004457717.1|	-	1.4e-43	148.4	0.5	1.6e-43	148.2	0.3	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|332796217|ref|YP_004457717.1|	-	3.6e-08	33.7	1.6	8.5e-08	32.5	0.5	1.9	1	1	1	2	2	2	1	AAA	domain
AAA_28	PF13521.1	gi|332796217|ref|YP_004457717.1|	-	6.4e-06	26.2	0.0	7.4e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332796217|ref|YP_004457717.1|	-	9e-06	26.5	0.3	2.5e-05	25.0	0.2	1.9	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|332796217|ref|YP_004457717.1|	-	0.00021	20.5	0.1	0.00098	18.3	0.0	1.9	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
AAA_22	PF13401.1	gi|332796217|ref|YP_004457717.1|	-	0.0004	20.5	0.0	0.00075	19.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|332796217|ref|YP_004457717.1|	-	0.00042	19.8	0.8	0.00096	18.6	0.0	1.9	3	0	0	3	3	3	1	SRP54-type	protein,	GTPase	domain
MobB	PF03205.9	gi|332796217|ref|YP_004457717.1|	-	0.0035	17.0	1.6	0.021	14.5	0.1	2.7	2	1	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|332796217|ref|YP_004457717.1|	-	0.0061	16.2	0.0	0.01	15.4	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
APS_kinase	PF01583.15	gi|332796217|ref|YP_004457717.1|	-	0.0084	15.7	0.0	0.013	15.1	0.0	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_2	PF07724.9	gi|332796217|ref|YP_004457717.1|	-	0.0094	15.8	1.0	0.044	13.6	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_30	PF13604.1	gi|332796217|ref|YP_004457717.1|	-	0.011	15.3	0.0	0.014	14.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|332796217|ref|YP_004457717.1|	-	0.017	15.0	2.3	0.024	14.5	0.1	2.3	2	1	0	2	2	2	0	AAA	domain
PRK	PF00485.13	gi|332796217|ref|YP_004457717.1|	-	0.029	13.9	0.0	0.05	13.1	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_33	PF13671.1	gi|332796217|ref|YP_004457717.1|	-	0.033	14.0	0.0	0.056	13.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_31	PF13614.1	gi|332796217|ref|YP_004457717.1|	-	0.045	13.6	0.1	0.19	11.6	0.0	2.0	1	1	0	2	2	2	0	AAA	domain
SKI	PF01202.17	gi|332796217|ref|YP_004457717.1|	-	0.073	12.9	2.5	2.4	8.0	0.1	2.3	2	1	0	2	2	2	0	Shikimate	kinase
AAA_5	PF07728.9	gi|332796217|ref|YP_004457717.1|	-	0.1	12.3	0.0	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.22	gi|332796217|ref|YP_004457717.1|	-	0.12	12.7	0.8	0.18	12.0	0.6	1.7	1	1	0	1	1	1	0	ABC	transporter
Arch_ATPase	PF01637.13	gi|332796217|ref|YP_004457717.1|	-	0.29	10.8	6.6	1.8	8.1	4.5	2.0	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_23	PF13476.1	gi|332796217|ref|YP_004457717.1|	-	1.6	9.0	11.7	2.5	8.3	8.1	1.3	1	1	0	1	1	1	0	AAA	domain
Auto_anti-p27	PF06677.7	gi|332796218|ref|YP_004457718.1|	-	8.9e-20	70.1	0.1	1.3e-19	69.6	0.1	1.2	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DNA_ligase_ZBD	PF03119.11	gi|332796218|ref|YP_004457718.1|	-	0.0007	19.2	0.4	0.0016	18.1	0.3	1.7	1	1	0	1	1	1	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
TF_Zn_Ribbon	PF08271.7	gi|332796218|ref|YP_004457718.1|	-	0.00089	18.5	0.3	0.002	17.4	0.2	1.7	1	0	0	1	1	1	1	TFIIB	zinc-binding
Rad50_zn_hook	PF04423.9	gi|332796218|ref|YP_004457718.1|	-	0.0026	17.1	0.3	0.016	14.6	0.0	2.4	2	0	0	2	2	2	1	Rad50	zinc	hook	motif
FYDLN_acid	PF09538.5	gi|332796218|ref|YP_004457718.1|	-	0.026	15.1	0.0	0.034	14.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
RRN7	PF11781.3	gi|332796218|ref|YP_004457718.1|	-	0.049	13.1	0.0	0.085	12.3	0.0	1.3	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DUF2072	PF09845.4	gi|332796218|ref|YP_004457718.1|	-	0.069	13.0	0.2	0.16	11.9	0.1	1.7	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
GFA	PF04828.9	gi|332796218|ref|YP_004457718.1|	-	0.083	12.8	0.0	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
Rieske	PF00355.21	gi|332796218|ref|YP_004457718.1|	-	0.092	12.3	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	Rieske	[2Fe-2S]	domain
UPF0147	PF03685.8	gi|332796219|ref|YP_004457719.1|	-	2.8e-38	129.6	2.3	3.1e-38	129.5	1.6	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|332796219|ref|YP_004457719.1|	-	0.0033	17.4	0.2	0.28	11.3	0.1	2.1	1	1	1	2	2	2	1	Uncharacterised	protein	family	(UPF0253)
HEAT_2	PF13646.1	gi|332796219|ref|YP_004457719.1|	-	0.089	13.0	0.2	0.2	11.9	0.1	1.7	1	1	0	1	1	1	0	HEAT	repeats
Lipase_chap	PF03280.9	gi|332796219|ref|YP_004457719.1|	-	0.13	11.7	0.0	0.15	11.6	0.0	1.0	1	0	0	1	1	1	0	Proteobacterial	lipase	chaperone	protein
HEAT_PBS	PF03130.11	gi|332796219|ref|YP_004457719.1|	-	0.22	12.0	0.8	1.9	9.1	0.3	2.5	2	1	0	2	2	2	0	PBS	lyase	HEAT-like	repeat
2-Hacid_dh_C	PF02826.14	gi|332796221|ref|YP_004457721.1|	-	6.6e-66	220.8	0.0	9.9e-66	220.2	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|332796221|ref|YP_004457721.1|	-	1.2e-34	118.6	0.0	1.4e-34	118.4	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|332796221|ref|YP_004457721.1|	-	0.0004	20.2	0.0	0.00074	19.3	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|332796221|ref|YP_004457721.1|	-	0.0076	16.6	0.1	0.023	15.1	0.1	1.8	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.13	gi|332796221|ref|YP_004457721.1|	-	0.035	14.1	1.3	0.19	11.7	0.0	2.6	2	1	1	3	3	3	0	TrkA-N	domain
XdhC_C	PF13478.1	gi|332796221|ref|YP_004457721.1|	-	0.11	12.7	0.0	0.33	11.2	0.0	1.8	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Helicase_RecD	PF05127.9	gi|332796222|ref|YP_004457722.1|	-	1.6e-42	145.1	0.0	2.6e-42	144.4	0.0	1.3	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|332796222|ref|YP_004457722.1|	-	5.6e-41	140.0	0.0	5.2e-40	136.8	0.0	2.4	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|332796222|ref|YP_004457722.1|	-	2.2e-19	68.9	0.0	5.3e-19	67.6	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|332796222|ref|YP_004457722.1|	-	6.7e-09	35.7	0.0	3.2e-08	33.6	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|332796222|ref|YP_004457722.1|	-	2.7e-07	30.5	0.0	1.7e-06	27.9	0.0	2.3	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
AAA_22	PF13401.1	gi|332796222|ref|YP_004457722.1|	-	8.9e-06	25.8	0.0	0.00016	21.7	0.0	2.8	2	1	1	3	3	3	1	AAA	domain
tRNA_bind_2	PF13725.1	gi|332796222|ref|YP_004457722.1|	-	0.031	14.3	0.0	0.068	13.2	0.0	1.5	1	0	0	1	1	1	0	Possible	tRNA	binding	domain
Acetyltransf_10	PF13673.1	gi|332796222|ref|YP_004457722.1|	-	0.033	14.3	0.0	0.27	11.3	0.0	2.6	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
AAA_30	PF13604.1	gi|332796222|ref|YP_004457722.1|	-	0.036	13.6	0.0	0.12	11.9	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
MFS_1	PF07690.11	gi|332796223|ref|YP_004457723.1|	-	3e-22	78.8	43.2	2.7e-11	42.7	15.3	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Usp	PF00582.21	gi|332796226|ref|YP_004457726.1|	-	2e-39	134.9	1.8	2.3e-39	134.8	1.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Pyr_redox_2	PF07992.9	gi|332796227|ref|YP_004457727.1|	-	2.7e-28	99.2	3.6	1.1e-18	67.8	0.1	3.3	2	1	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332796227|ref|YP_004457727.1|	-	5.7e-22	77.9	1.2	3.8e-15	56.0	0.0	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332796227|ref|YP_004457727.1|	-	4e-15	55.5	8.8	6.6e-05	21.9	2.0	4.1	3	1	0	3	3	3	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332796227|ref|YP_004457727.1|	-	4.9e-12	45.7	0.4	1.5e-05	24.9	0.0	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_dim	PF02852.17	gi|332796227|ref|YP_004457727.1|	-	2.1e-11	43.8	0.2	5e-11	42.6	0.1	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
HI0933_like	PF03486.9	gi|332796227|ref|YP_004457727.1|	-	1.2e-10	40.4	1.6	3.6e-06	25.7	0.2	3.1	3	0	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|332796227|ref|YP_004457727.1|	-	1.9e-09	37.1	0.1	5e-07	29.1	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332796227|ref|YP_004457727.1|	-	9.9e-09	35.5	0.1	2.8e-08	34.0	0.1	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|332796227|ref|YP_004457727.1|	-	2e-08	33.5	3.5	9.2e-05	21.4	0.2	2.7	3	0	0	3	3	3	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|332796227|ref|YP_004457727.1|	-	4.7e-07	29.1	0.5	0.0027	16.8	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.19	gi|332796227|ref|YP_004457727.1|	-	1.5e-06	27.3	3.9	0.0059	15.5	0.1	3.0	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|332796227|ref|YP_004457727.1|	-	3.6e-05	22.9	0.3	0.012	14.7	0.0	2.4	2	0	0	2	2	2	2	Thi4	family
3HCDH_N	PF02737.13	gi|332796227|ref|YP_004457727.1|	-	0.0016	18.1	0.1	1.3	8.6	0.0	2.4	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Trp_halogenase	PF04820.9	gi|332796227|ref|YP_004457727.1|	-	0.0037	15.9	0.1	0.5	8.9	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|332796227|ref|YP_004457727.1|	-	0.014	14.3	0.4	0.83	8.5	0.1	2.4	2	0	0	2	2	2	0	Lycopene	cyclase	protein
UDPG_MGDP_dh_N	PF03721.9	gi|332796227|ref|YP_004457727.1|	-	0.017	14.5	1.2	1.1	8.5	0.0	3.4	3	1	1	4	4	4	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ApbA	PF02558.11	gi|332796227|ref|YP_004457727.1|	-	0.039	13.4	0.1	1.3	8.4	0.0	2.4	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.16	gi|332796227|ref|YP_004457727.1|	-	0.055	13.0	0.0	11	5.5	0.0	2.3	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|332796227|ref|YP_004457727.1|	-	0.14	12.4	0.0	1.6	9.0	0.0	2.3	2	0	0	2	2	2	0	Putative	NAD(P)-binding
BPL_LplA_LipB	PF03099.14	gi|332796228|ref|YP_004457728.1|	-	1.8e-22	79.6	0.0	3.4e-22	78.7	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
DUF1934	PF09148.5	gi|332796228|ref|YP_004457728.1|	-	0.032	13.9	0.2	0.051	13.2	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1934)
Sua5_yciO_yrdC	PF01300.13	gi|332796229|ref|YP_004457729.1|	-	3.9e-58	195.6	0.0	5.5e-58	195.1	0.0	1.2	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.8	gi|332796229|ref|YP_004457729.1|	-	2.3e-28	98.7	0.0	4.1e-28	97.9	0.0	1.4	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
Oxidored_q6	PF01058.17	gi|332796230|ref|YP_004457730.1|	-	4.9e-23	81.1	0.0	7e-23	80.6	0.0	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
DUF4147	PF13660.1	gi|332796231|ref|YP_004457731.1|	-	3.3e-56	190.0	0.0	4.7e-56	189.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|332796231|ref|YP_004457731.1|	-	1e-26	93.1	0.2	2.1e-26	92.1	0.2	1.6	1	0	0	1	1	1	1	MOFRL	family
Ank_2	PF12796.2	gi|332796231|ref|YP_004457731.1|	-	0.013	15.7	0.0	0.43	10.9	0.0	2.1	2	1	1	3	3	3	0	Ankyrin	repeats	(3	copies)
DUF2250	PF10007.4	gi|332796232|ref|YP_004457732.1|	-	0.0017	18.2	0.0	0.0059	16.4	0.0	1.9	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Fe_dep_repr_C	PF02742.10	gi|332796233|ref|YP_004457733.1|	-	2.4e-29	100.8	0.3	4.8e-29	99.8	0.0	1.6	2	0	0	2	2	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|332796233|ref|YP_004457733.1|	-	2.6e-10	40.0	0.1	1e-09	38.2	0.1	2.0	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.2	gi|332796233|ref|YP_004457733.1|	-	2.6e-07	30.2	0.2	7.4e-07	28.7	0.0	1.8	2	0	0	2	2	2	1	MarR	family
MarR	PF01047.17	gi|332796233|ref|YP_004457733.1|	-	4.6e-07	29.4	0.0	1.9e-06	27.4	0.0	2.1	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.1	gi|332796233|ref|YP_004457733.1|	-	6.2e-07	29.1	0.1	1.5e-06	27.9	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
FeoA	PF04023.9	gi|332796233|ref|YP_004457733.1|	-	3.3e-06	26.9	0.2	1.2e-05	25.1	0.1	1.9	2	0	0	2	2	2	1	FeoA	domain
HTH_5	PF01022.15	gi|332796233|ref|YP_004457733.1|	-	3.9e-05	23.2	0.1	0.00016	21.2	0.0	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|332796233|ref|YP_004457733.1|	-	6.8e-05	22.2	0.1	0.00034	19.9	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_27	PF13463.1	gi|332796233|ref|YP_004457733.1|	-	0.00013	22.2	0.1	0.00031	20.9	0.1	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|332796233|ref|YP_004457733.1|	-	0.00031	20.3	0.6	0.0046	16.5	0.0	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_Crp_2	PF13545.1	gi|332796233|ref|YP_004457733.1|	-	0.0005	19.7	0.1	0.0011	18.7	0.1	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
AAA_assoc_C	PF09821.4	gi|332796233|ref|YP_004457733.1|	-	0.0012	19.0	0.1	0.002	18.3	0.0	1.4	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
HemN_C	PF06969.11	gi|332796233|ref|YP_004457733.1|	-	0.0013	18.7	0.0	0.003	17.5	0.0	1.6	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_DeoR	PF08220.7	gi|332796233|ref|YP_004457733.1|	-	0.0014	18.1	0.0	0.0035	16.8	0.0	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|332796233|ref|YP_004457733.1|	-	0.0042	16.4	0.0	0.018	14.4	0.0	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
PadR	PF03551.9	gi|332796233|ref|YP_004457733.1|	-	0.011	15.5	0.2	0.096	12.4	0.0	2.5	1	1	1	2	2	2	0	Transcriptional	regulator	PadR-like	family
HTH_41	PF14502.1	gi|332796233|ref|YP_004457733.1|	-	0.014	14.9	0.0	0.036	13.6	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|332796233|ref|YP_004457733.1|	-	0.021	14.5	0.1	0.056	13.1	0.0	1.7	1	1	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
TrmB	PF01978.14	gi|332796233|ref|YP_004457733.1|	-	0.026	14.2	0.0	0.068	12.8	0.0	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.4	gi|332796233|ref|YP_004457733.1|	-	0.041	13.7	1.1	0.091	12.6	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_11	PF08279.7	gi|332796233|ref|YP_004457733.1|	-	0.08	12.6	0.6	0.3	10.7	0.1	2.2	2	0	0	2	2	2	0	HTH	domain
DUF4393	PF14337.1	gi|332796233|ref|YP_004457733.1|	-	0.095	12.1	0.1	0.17	11.3	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
FeoC	PF09012.5	gi|332796233|ref|YP_004457733.1|	-	0.1	12.3	0.0	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Erp_C	PF06780.6	gi|332796234|ref|YP_004457734.1|	-	0.012	15.4	1.3	0.014	15.2	0.7	1.3	1	1	0	1	1	1	0	Erp	protein	C-terminus
Ish1	PF10281.4	gi|332796234|ref|YP_004457734.1|	-	0.022	14.8	0.0	0.044	13.8	0.0	1.4	1	0	0	1	1	1	0	Putative	stress-responsive	nuclear	envelope	protein
LPP20	PF02169.11	gi|332796234|ref|YP_004457734.1|	-	0.099	12.7	0.4	0.15	12.1	0.3	1.4	1	1	0	1	1	1	0	LPP20	lipoprotein
DUF4355	PF14265.1	gi|332796234|ref|YP_004457734.1|	-	0.12	12.2	0.5	0.18	11.7	0.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
DUF456	PF04306.8	gi|332796235|ref|YP_004457735.1|	-	0.043	13.8	1.0	0.055	13.5	0.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF456)
Methyltransf_11	PF08241.7	gi|332796237|ref|YP_004457737.1|	-	2.9e-19	69.3	0.0	6.5e-19	68.2	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332796237|ref|YP_004457737.1|	-	1.4e-10	41.0	0.0	1.9e-10	40.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332796237|ref|YP_004457737.1|	-	2.1e-10	40.9	0.0	3.5e-10	40.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|332796237|ref|YP_004457737.1|	-	2.6e-09	36.9	0.0	3.8e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332796237|ref|YP_004457737.1|	-	1.2e-08	35.2	0.0	1.7e-08	34.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|332796237|ref|YP_004457737.1|	-	1.6e-05	24.1	0.0	2.2e-05	23.6	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
DREV	PF05219.7	gi|332796237|ref|YP_004457737.1|	-	0.0038	16.1	0.0	0.0052	15.7	0.0	1.1	1	0	0	1	1	1	1	DREV	methyltransferase
Methyltransf_18	PF12847.2	gi|332796237|ref|YP_004457737.1|	-	0.0051	17.3	0.0	0.011	16.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|332796237|ref|YP_004457737.1|	-	0.0074	15.9	0.0	0.0087	15.7	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
CBS	PF00571.23	gi|332796238|ref|YP_004457738.1|	-	1.1e-24	85.9	5.5	4.7e-08	32.6	0.0	5.0	5	1	0	5	5	5	3	CBS	domain
Phosducin	PF02114.11	gi|332796238|ref|YP_004457738.1|	-	0.059	12.0	0.1	0.087	11.5	0.0	1.3	1	0	0	1	1	1	0	Phosducin
HSDR_N_2	PF13588.1	gi|332796238|ref|YP_004457738.1|	-	1.9	8.2	5.7	0.34	10.7	0.9	2.1	2	1	0	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
MobB	PF03205.9	gi|332796239|ref|YP_004457739.1|	-	2.5e-21	75.8	0.2	3.2e-21	75.5	0.1	1.1	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Arch_ATPase	PF01637.13	gi|332796239|ref|YP_004457739.1|	-	0.044	13.4	2.0	0.068	12.8	1.4	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_14	PF13173.1	gi|332796239|ref|YP_004457739.1|	-	0.079	12.8	0.1	0.16	11.8	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|332796239|ref|YP_004457739.1|	-	0.082	13.3	1.3	0.24	11.9	0.5	2.1	1	1	1	2	2	2	0	Miro-like	protein
NTPase_1	PF03266.10	gi|332796239|ref|YP_004457739.1|	-	0.11	12.2	0.0	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	NTPase
MoeA_N	PF03453.12	gi|332796240|ref|YP_004457740.1|	-	7e-47	158.7	0.0	1.1e-46	158.1	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|332796240|ref|YP_004457740.1|	-	1.9e-18	66.2	0.0	2.9e-18	65.6	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Peptidase_S24	PF00717.18	gi|332796240|ref|YP_004457740.1|	-	0.026	14.1	0.1	0.47	10.1	0.0	2.7	2	0	0	2	2	2	0	Peptidase	S24-like
NTP_transf_3	PF12804.2	gi|332796241|ref|YP_004457741.1|	-	8.5e-19	68.1	0.0	1.2e-18	67.6	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CofC	PF01983.11	gi|332796241|ref|YP_004457741.1|	-	0.0045	15.9	0.1	0.0082	15.1	0.1	1.4	1	0	0	1	1	1	1	Guanylyl	transferase	CofC	like
DOT1	PF08123.8	gi|332796242|ref|YP_004457742.1|	-	2e-07	30.5	0.5	2.5e-06	26.9	0.0	2.0	1	1	0	2	2	2	1	Histone	methylation	protein	DOT1
Methyltransf_31	PF13847.1	gi|332796242|ref|YP_004457742.1|	-	4e-05	23.2	0.6	7.1e-05	22.4	0.4	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|332796242|ref|YP_004457742.1|	-	0.012	14.6	0.0	0.015	14.3	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|332796242|ref|YP_004457742.1|	-	0.014	15.4	0.0	0.019	14.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
MetW	PF07021.7	gi|332796242|ref|YP_004457742.1|	-	0.015	14.6	0.2	0.026	13.8	0.1	1.5	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_4	PF02390.12	gi|332796242|ref|YP_004457742.1|	-	0.038	13.0	0.0	0.065	12.2	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_25	PF13649.1	gi|332796242|ref|YP_004457742.1|	-	0.067	13.5	0.0	0.095	13.0	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|332796242|ref|YP_004457742.1|	-	0.11	12.2	0.0	0.12	12.1	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
ATP_bind_4	PF01902.12	gi|332796243|ref|YP_004457743.1|	-	2.4e-63	213.4	0.0	2.6e-63	213.3	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|332796243|ref|YP_004457743.1|	-	0.0073	15.6	0.0	0.019	14.2	0.0	1.8	1	1	1	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Amidohydro_1	PF01979.15	gi|332796244|ref|YP_004457744.1|	-	1.5e-34	120.1	0.0	1.9e-34	119.7	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|332796244|ref|YP_004457744.1|	-	2.2e-12	46.6	0.0	6.3e-12	45.1	0.0	1.8	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|332796244|ref|YP_004457744.1|	-	7.5e-12	45.1	0.0	3.1e-08	33.2	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|332796244|ref|YP_004457744.1|	-	8.6e-11	42.3	0.0	0.0002	21.5	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
A_deaminase	PF00962.17	gi|332796244|ref|YP_004457744.1|	-	3.9e-06	26.0	0.0	6.6e-06	25.2	0.0	1.3	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
DNA_mis_repair	PF01119.14	gi|332796244|ref|YP_004457744.1|	-	0.019	14.4	0.1	4	6.9	0.0	2.9	3	0	0	3	3	3	0	DNA	mismatch	repair	protein,	C-terminal	domain
TrmB	PF01978.14	gi|332796245|ref|YP_004457745.1|	-	4.4e-14	51.9	0.1	6.4e-14	51.4	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|332796245|ref|YP_004457745.1|	-	1.3e-07	31.1	0.0	2e-07	30.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|332796245|ref|YP_004457745.1|	-	5.5e-05	22.7	0.7	0.00013	21.5	0.2	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TFIIE_alpha	PF02002.12	gi|332796245|ref|YP_004457745.1|	-	0.00015	21.2	0.2	0.00019	20.8	0.1	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|332796245|ref|YP_004457745.1|	-	0.002	17.8	0.1	0.0032	17.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|332796245|ref|YP_004457745.1|	-	0.0085	15.8	0.1	0.015	15.0	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
z-alpha	PF02295.12	gi|332796245|ref|YP_004457745.1|	-	0.014	15.1	0.2	0.14	11.9	0.0	2.1	2	0	0	2	2	2	0	Adenosine	deaminase	z-alpha	domain
HTH_27	PF13463.1	gi|332796245|ref|YP_004457745.1|	-	0.019	15.2	0.0	0.031	14.6	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|332796245|ref|YP_004457745.1|	-	0.025	13.9	0.3	0.054	12.9	0.2	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF4423	PF14394.1	gi|332796245|ref|YP_004457745.1|	-	0.054	13.0	0.4	0.19	11.2	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HxlR	PF01638.12	gi|332796245|ref|YP_004457745.1|	-	0.14	11.7	0.1	0.21	11.2	0.0	1.3	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
Antitoxin-MazE	PF04014.13	gi|332796246|ref|YP_004457746.1|	-	4.1e-11	42.3	0.3	4.5e-11	42.2	0.2	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|332796246|ref|YP_004457746.1|	-	9.5e-05	21.7	0.2	0.00013	21.2	0.1	1.3	1	1	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
DUF4387	PF14330.1	gi|332796246|ref|YP_004457746.1|	-	0.046	14.0	0.1	0.048	13.9	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4387)
DUF1905	PF08922.6	gi|332796246|ref|YP_004457746.1|	-	0.062	12.8	0.1	0.092	12.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
YmzC	PF14157.1	gi|332796246|ref|YP_004457746.1|	-	0.067	13.0	0.6	0.46	10.3	0.4	1.9	1	1	0	1	1	1	0	YmzC-like	protein
DUF2258	PF10015.4	gi|332796246|ref|YP_004457746.1|	-	0.2	11.4	1.2	0.25	11.1	0.9	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
TatD_DNase	PF01026.16	gi|332796247|ref|YP_004457747.1|	-	7.3e-53	179.3	0.0	8.1e-53	179.2	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
AgrB	PF04647.10	gi|332796248|ref|YP_004457748.1|	-	0.024	13.6	1.0	0.029	13.4	0.7	1.2	1	0	0	1	1	1	0	Accessory	gene	regulator	B
Frag1	PF10277.4	gi|332796248|ref|YP_004457748.1|	-	0.12	11.8	3.0	0.13	11.6	2.1	1.0	1	0	0	1	1	1	0	Frag1/DRAM/Sfk1	family
DUF4131	PF13567.1	gi|332796248|ref|YP_004457748.1|	-	0.33	10.3	1.5	0.37	10.1	1.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
COX1	PF00115.15	gi|332796250|ref|YP_004457750.1|	-	7.6e-59	199.5	59.4	7.6e-59	199.5	41.2	3.0	1	1	2	3	3	3	3	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Pyr_redox_2	PF07992.9	gi|332796251|ref|YP_004457751.1|	-	9.4e-07	28.9	0.2	8.6e-05	22.5	0.1	3.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
dNK	PF01712.14	gi|332796251|ref|YP_004457751.1|	-	0.059	13.2	3.9	0.49	10.2	0.3	2.3	2	0	0	2	2	2	0	Deoxynucleoside	kinase
DUF3194	PF11419.3	gi|332796251|ref|YP_004457751.1|	-	0.58	10.3	3.4	0.83	9.8	0.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3194)
Nol1_Nop2_Fmu	PF01189.12	gi|332796253|ref|YP_004457753.1|	-	8e-30	104.1	0.2	3.4e-29	102.0	0.1	1.8	1	1	0	1	1	1	1	NOL1/NOP2/sun	family
Sipho_tail	PF05709.6	gi|332796253|ref|YP_004457753.1|	-	0.00049	19.3	1.4	0.00082	18.5	0.9	1.3	1	0	0	1	1	1	1	Phage	tail	protein
MTS	PF05175.9	gi|332796253|ref|YP_004457753.1|	-	0.0016	17.8	0.1	0.0026	17.1	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
UBA_e1_C	PF09358.5	gi|332796253|ref|YP_004457753.1|	-	0.94	9.6	6.3	0.23	11.6	1.8	1.9	2	0	0	2	2	2	0	Ubiquitin-activating	enzyme	e1	C-terminal	domain
PA28_alpha	PF02251.13	gi|332796255|ref|YP_004457755.1|	-	0.058	13.5	1.0	0.37	10.9	0.6	2.5	1	1	1	2	2	2	0	Proteasome	activator	pa28	alpha	subunit
DUF632	PF04782.7	gi|332796256|ref|YP_004457756.1|	-	0.023	13.7	0.1	0.028	13.4	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF632)
TBCA	PF02970.11	gi|332796256|ref|YP_004457756.1|	-	0.034	14.1	0.7	0.062	13.3	0.5	1.3	1	0	0	1	1	1	0	Tubulin	binding	cofactor	A
TMCO5	PF14992.1	gi|332796256|ref|YP_004457756.1|	-	0.044	12.9	5.2	0.042	12.9	0.7	2.2	2	0	0	2	2	2	0	TMCO5	family
HTH_45	PF14947.1	gi|332796257|ref|YP_004457757.1|	-	1.5e-06	27.8	0.0	2e-06	27.4	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF2250	PF10007.4	gi|332796257|ref|YP_004457757.1|	-	0.00037	20.3	0.1	0.23	11.4	0.0	2.2	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF3116	PF11313.3	gi|332796257|ref|YP_004457757.1|	-	0.00069	19.1	0.0	0.0008	18.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3116)
DUF505	PF04458.7	gi|332796257|ref|YP_004457757.1|	-	0.0013	16.9	0.2	0.0014	16.8	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
DUF4364	PF14277.1	gi|332796257|ref|YP_004457757.1|	-	0.02	14.4	0.1	0.022	14.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
Replic_Relax	PF13814.1	gi|332796257|ref|YP_004457757.1|	-	0.026	14.3	0.0	0.031	14.1	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
TrmB	PF01978.14	gi|332796257|ref|YP_004457757.1|	-	0.028	14.1	0.1	0.039	13.6	0.1	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|332796257|ref|YP_004457757.1|	-	0.031	14.0	0.1	0.059	13.1	0.0	1.8	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF1495	PF07381.6	gi|332796257|ref|YP_004457757.1|	-	0.045	13.4	0.0	0.068	12.8	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
YcfA	PF07927.7	gi|332796257|ref|YP_004457757.1|	-	0.13	12.1	0.2	0.21	11.5	0.1	1.5	1	1	0	1	1	1	0	YcfA-like	protein
HhH-GPD	PF00730.20	gi|332796258|ref|YP_004457758.1|	-	1.4e-18	67.1	0.0	3.2e-18	65.9	0.0	1.6	2	0	0	2	2	2	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|332796258|ref|YP_004457758.1|	-	8.5e-08	31.4	2.3	1.6e-07	30.6	0.1	2.5	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|332796258|ref|YP_004457758.1|	-	0.0039	17.3	1.9	0.073	13.2	1.3	2.6	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
EndIII_4Fe-2S	PF10576.4	gi|332796258|ref|YP_004457758.1|	-	0.0055	16.8	9.8	0.0097	16.0	6.8	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
DUF2400	PF09674.5	gi|332796258|ref|YP_004457758.1|	-	0.0099	15.5	0.1	0.28	10.8	0.0	2.5	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF2400)
HHH_8	PF14716.1	gi|332796258|ref|YP_004457758.1|	-	0.021	15.0	0.1	0.1	12.7	0.1	2.3	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
Asp_Glu_race	PF01177.17	gi|332796258|ref|YP_004457758.1|	-	0.086	12.7	0.0	0.12	12.2	0.0	1.2	1	0	0	1	1	1	0	Asp/Glu/Hydantoin	racemase
ParBc	PF02195.13	gi|332796259|ref|YP_004457759.1|	-	4.1e-11	42.8	0.1	2.4e-10	40.3	0.0	1.9	2	0	0	2	2	2	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|332796259|ref|YP_004457759.1|	-	0.07	11.6	0.0	3.9	5.8	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1015)
Glyco_tranf_2_3	PF13641.1	gi|332796260|ref|YP_004457760.1|	-	2.5e-26	92.8	0.0	3.3e-26	92.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|332796260|ref|YP_004457760.1|	-	4e-21	75.5	0.1	4e-21	75.5	0.1	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|332796260|ref|YP_004457760.1|	-	4.2e-21	75.3	0.0	6.4e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|332796260|ref|YP_004457760.1|	-	1.3e-11	44.0	0.0	2.5e-11	43.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|332796260|ref|YP_004457760.1|	-	1.6e-05	24.1	0.0	3.6e-05	23.0	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Cellulose_synt	PF03552.9	gi|332796260|ref|YP_004457760.1|	-	0.00024	19.5	0.1	0.0003	19.2	0.1	1.3	1	0	0	1	1	1	1	Cellulose	synthase
DEAD_assoc	PF08494.6	gi|332796261|ref|YP_004457761.1|	-	2e-56	190.7	0.2	4.7e-56	189.4	0.1	1.7	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|332796261|ref|YP_004457761.1|	-	2e-30	105.5	0.1	2.2e-29	102.0	0.0	2.6	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332796261|ref|YP_004457761.1|	-	7.4e-14	51.3	0.0	3.4e-13	49.2	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332796261|ref|YP_004457761.1|	-	3.5e-08	33.5	0.0	9e-08	32.1	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DDE_Tnp_1_2	PF13586.1	gi|332796261|ref|YP_004457761.1|	-	0.036	14.2	0.6	0.12	12.6	0.4	1.9	1	0	0	1	1	1	0	Transposase	DDE	domain
Prok-JAB	PF14464.1	gi|332796262|ref|YP_004457762.1|	-	9.5e-06	25.1	0.0	1.2e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
HrcA_DNA-bdg	PF03444.10	gi|332796263|ref|YP_004457763.1|	-	9e-35	117.9	0.3	3e-34	116.2	0.2	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.23	gi|332796263|ref|YP_004457763.1|	-	1.7e-28	98.1	4.1	3.1e-14	52.4	1.6	2.6	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.15	gi|332796263|ref|YP_004457763.1|	-	2.6e-08	33.8	0.4	1e-07	31.9	0.0	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|332796263|ref|YP_004457763.1|	-	0.0056	16.2	0.1	0.015	14.9	0.1	1.7	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.14	gi|332796263|ref|YP_004457763.1|	-	0.025	14.3	0.6	0.26	11.0	0.0	2.4	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|332796263|ref|YP_004457763.1|	-	0.07	12.7	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF2192	PF09958.4	gi|332796264|ref|YP_004457764.1|	-	2.2e-83	279.0	3.1	2.5e-83	278.8	2.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
CRS1_YhbY	PF01985.16	gi|332796265|ref|YP_004457765.1|	-	0.07	13.1	0.5	0.11	12.5	0.3	1.3	1	0	0	1	1	1	0	CRS1	/	YhbY	(CRM)	domain
DUF4255	PF14065.1	gi|332796265|ref|YP_004457765.1|	-	0.17	11.3	0.2	0.25	10.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4255)
HTH_3	PF01381.17	gi|332796266|ref|YP_004457766.1|	-	1.2e-07	31.4	0.2	2.6e-07	30.3	0.1	1.7	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.2	gi|332796266|ref|YP_004457766.1|	-	0.00064	19.7	0.2	0.0024	17.8	0.1	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|332796266|ref|YP_004457766.1|	-	0.0007	19.1	2.1	0.0045	16.5	0.1	2.4	2	0	0	2	2	2	1	HTH	domain
HTH_6	PF01418.12	gi|332796266|ref|YP_004457766.1|	-	0.0047	16.6	0.1	0.035	13.8	0.0	2.3	2	1	0	2	2	2	1	Helix-turn-helix	domain,	rpiR	family
Sigma70_r4_2	PF08281.7	gi|332796266|ref|YP_004457766.1|	-	0.0063	15.9	0.2	0.013	14.9	0.1	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.1	gi|332796266|ref|YP_004457766.1|	-	0.0063	15.6	0.0	0.01	15.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_23	PF13384.1	gi|332796266|ref|YP_004457766.1|	-	0.015	14.9	0.0	0.025	14.2	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_Tnp_1	PF01527.15	gi|332796266|ref|YP_004457766.1|	-	0.021	14.7	0.2	0.047	13.6	0.1	1.9	1	1	0	1	1	1	0	Transposase
HTH_31	PF13560.1	gi|332796266|ref|YP_004457766.1|	-	0.032	14.4	0.0	0.046	13.9	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
Homeobox	PF00046.24	gi|332796266|ref|YP_004457766.1|	-	0.043	13.4	0.2	2.9	7.5	0.0	2.8	2	1	1	3	3	3	0	Homeobox	domain
HTH_28	PF13518.1	gi|332796266|ref|YP_004457766.1|	-	0.072	13.1	0.1	0.12	12.3	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Trp_repressor	PF01371.14	gi|332796266|ref|YP_004457766.1|	-	0.089	12.7	0.1	0.21	11.5	0.0	1.7	2	1	0	2	2	2	0	Trp	repressor	protein
IF2_N	PF04760.10	gi|332796266|ref|YP_004457766.1|	-	0.1	12.2	0.0	0.1	12.2	0.0	2.8	4	1	0	4	4	4	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_Mga	PF08280.6	gi|332796266|ref|YP_004457766.1|	-	0.1	12.3	0.4	0.37	10.5	0.0	2.1	2	1	1	3	3	3	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_24	PF13412.1	gi|332796266|ref|YP_004457766.1|	-	0.11	11.9	0.2	0.11	11.9	0.1	2.3	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
DUF3826	PF12875.2	gi|332796266|ref|YP_004457766.1|	-	0.37	10.4	2.5	0.28	10.8	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3826)
PNPase	PF03726.9	gi|332796266|ref|YP_004457766.1|	-	1.1	9.6	4.8	0.68	10.2	0.6	2.0	1	1	1	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
Aminotran_1_2	PF00155.16	gi|332796268|ref|YP_004457768.1|	-	5.2e-37	127.6	0.0	6.7e-37	127.2	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|332796268|ref|YP_004457768.1|	-	1.7e-10	40.0	0.0	2.5e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
SpoOE-like	PF09388.5	gi|332796268|ref|YP_004457768.1|	-	0.095	12.2	0.1	3	7.4	0.0	2.8	3	0	0	3	3	3	0	Spo0E	like	sporulation	regulatory	protein
Beta_elim_lyase	PF01212.16	gi|332796268|ref|YP_004457768.1|	-	0.12	11.5	0.0	0.18	10.8	0.0	1.2	1	0	0	1	1	1	0	Beta-eliminating	lyase
MoCF_biosynth	PF00994.19	gi|332796269|ref|YP_004457769.1|	-	1.2e-30	105.8	0.1	2e-30	105.0	0.1	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Syntaxin_2	PF14523.1	gi|332796269|ref|YP_004457769.1|	-	0.0019	18.1	5.2	0.0055	16.7	0.2	2.8	3	0	0	3	3	3	1	Syntaxin-like	protein
VirArc_Nuclease	PF12187.3	gi|332796269|ref|YP_004457769.1|	-	0.0026	17.2	0.3	0.0068	15.8	0.1	1.7	2	0	0	2	2	2	1	Viral/Archaeal	nuclease
RBD-FIP	PF09457.5	gi|332796269|ref|YP_004457769.1|	-	0.027	14.2	0.8	0.09	12.5	0.5	1.9	1	0	0	1	1	1	0	FIP	domain
MT	PF12777.2	gi|332796269|ref|YP_004457769.1|	-	0.061	12.0	0.0	0.078	11.7	0.0	1.2	1	0	0	1	1	1	0	Microtubule-binding	stalk	of	dynein	motor
RasGAP	PF00616.14	gi|332796269|ref|YP_004457769.1|	-	0.071	12.7	1.3	0.17	11.5	0.9	1.6	1	1	0	1	1	1	0	GTPase-activator	protein	for	Ras-like	GTPase
Abhydrolase_6	PF12697.2	gi|332796270|ref|YP_004457770.1|	-	2e-29	103.1	0.0	2.3e-29	102.8	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|332796270|ref|YP_004457770.1|	-	1.4e-16	60.7	0.0	3.9e-15	56.0	0.0	2.0	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|332796270|ref|YP_004457770.1|	-	2.2e-14	53.4	0.0	3.7e-14	52.6	0.0	1.5	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.3	gi|332796270|ref|YP_004457770.1|	-	1.5e-07	31.1	0.0	3.8e-07	29.8	0.0	1.6	2	0	0	2	2	2	1	Putative	lysophospholipase
PGAP1	PF07819.8	gi|332796270|ref|YP_004457770.1|	-	0.0022	17.6	0.1	0.021	14.4	0.1	2.1	1	1	0	1	1	1	1	PGAP1-like	protein
Ndr	PF03096.9	gi|332796270|ref|YP_004457770.1|	-	0.015	13.7	0.0	0.019	13.4	0.0	1.5	1	1	0	1	1	1	0	Ndr	family
B5	PF03484.10	gi|332796271|ref|YP_004457771.1|	-	1.1e-20	73.1	2.4	2.8e-17	62.3	0.3	2.7	2	0	0	2	2	2	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|332796271|ref|YP_004457771.1|	-	6.9e-15	54.9	1.5	1.3e-14	53.9	0.2	2.0	2	0	0	2	2	2	1	B3/4	domain
tRNA-synt_2d	PF01409.15	gi|332796272|ref|YP_004457772.1|	-	1.6e-83	279.7	0.0	2.2e-83	279.2	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|332796272|ref|YP_004457772.1|	-	8.2e-08	31.3	0.5	0.0084	14.9	0.1	2.7	2	1	0	2	2	2	2	tRNA	synthetases	class	II	(D,	K	and	N)
HTH_45	PF14947.1	gi|332796272|ref|YP_004457772.1|	-	0.021	14.6	1.9	6.5	6.6	0.1	2.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
tRNA-synt_2b	PF00587.20	gi|332796272|ref|YP_004457772.1|	-	0.027	14.0	0.2	0.18	11.3	0.0	2.1	1	1	0	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
TrmB	PF01978.14	gi|332796272|ref|YP_004457772.1|	-	0.05	13.3	5.5	3.2	7.5	0.6	3.8	3	0	0	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.4	gi|332796272|ref|YP_004457772.1|	-	3.2	7.7	8.8	6.7	6.6	0.2	3.3	3	2	1	4	4	4	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Lactamase_B_3	PF13483.1	gi|332796273|ref|YP_004457773.1|	-	6.7e-20	71.4	0.1	9.5e-20	70.9	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|332796273|ref|YP_004457773.1|	-	1.4e-16	60.6	0.2	1.7e-16	60.3	0.2	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|332796273|ref|YP_004457773.1|	-	5.3e-05	22.9	1.0	9.5e-05	22.1	0.7	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
LTD	PF00932.14	gi|332796273|ref|YP_004457773.1|	-	0.098	12.7	0.3	0.32	11.0	0.1	1.9	2	0	0	2	2	2	0	Lamin	Tail	Domain
Peptidase_M24	PF00557.19	gi|332796274|ref|YP_004457774.1|	-	4.5e-46	157.0	0.0	5.3e-46	156.8	0.0	1.0	1	0	0	1	1	1	1	Metallopeptidase	family	M24
DUF1512	PF07431.7	gi|332796275|ref|YP_004457775.1|	-	8.9e-134	445.7	9.9	1.1e-133	445.4	6.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
DUF357	PF04010.8	gi|332796275|ref|YP_004457775.1|	-	1	9.0	3.9	2.9	7.6	0.0	3.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF357)
HD	PF01966.17	gi|332796277|ref|YP_004457777.1|	-	6.8e-10	39.0	0.1	2.7e-09	37.0	0.0	2.1	2	1	0	2	2	2	1	HD	domain
HDOD	PF08668.7	gi|332796277|ref|YP_004457777.1|	-	0.027	13.7	0.0	0.41	9.8	0.0	2.2	2	0	0	2	2	2	0	HDOD	domain
Hydrolase_3	PF08282.7	gi|332796278|ref|YP_004457778.1|	-	1.9e-31	109.5	0.0	2.3e-16	60.1	0.1	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|332796278|ref|YP_004457778.1|	-	3.9e-10	40.2	0.8	2.9e-07	30.8	0.0	2.5	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|332796278|ref|YP_004457778.1|	-	4.3e-10	40.3	0.9	3.2e-06	27.6	0.0	3.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|332796278|ref|YP_004457778.1|	-	4.4e-07	29.4	0.0	1.1e-05	24.8	0.0	2.1	2	0	0	2	2	2	1	Sucrose-6F-phosphate	phosphohydrolase
HAD_2	PF13419.1	gi|332796278|ref|YP_004457778.1|	-	8.1e-06	26.1	0.2	0.0045	17.2	0.0	3.4	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|332796278|ref|YP_004457778.1|	-	0.0018	18.1	0.0	0.0042	16.9	0.0	1.6	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Trehalose_PPase	PF02358.11	gi|332796278|ref|YP_004457778.1|	-	0.0069	15.3	0.0	1	8.2	0.0	2.1	2	0	0	2	2	2	2	Trehalose-phosphatase
Hydrolase_like	PF13242.1	gi|332796278|ref|YP_004457778.1|	-	0.026	14.2	0.0	0.047	13.4	0.0	1.4	1	0	0	1	1	1	0	HAD-hyrolase-like
tRNA-synt_1c	PF00749.16	gi|332796279|ref|YP_004457779.1|	-	6.5e-84	281.2	0.8	6.8e-83	277.9	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|332796279|ref|YP_004457779.1|	-	2.1e-20	73.1	1.1	5.8e-20	71.6	0.8	1.8	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
eIF-5a	PF01287.15	gi|332796279|ref|YP_004457779.1|	-	0.033	14.1	3.0	5.9	6.9	0.2	3.7	4	0	0	4	4	4	0	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
Ribosomal_L21p	PF00829.16	gi|332796279|ref|YP_004457779.1|	-	0.069	13.2	2.9	0.21	11.7	2.0	1.8	1	0	0	1	1	1	0	Ribosomal	prokaryotic	L21	protein
Ribosomal_L7Ae	PF01248.21	gi|332796280|ref|YP_004457780.1|	-	2.6e-33	113.3	1.3	3.3e-33	113.0	0.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.1	gi|332796280|ref|YP_004457780.1|	-	0.0023	17.7	0.0	0.0031	17.2	0.0	1.2	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
DUF1269	PF06897.7	gi|332796280|ref|YP_004457780.1|	-	0.038	14.0	0.3	9.2	6.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1269)
DbpA	PF03880.10	gi|332796280|ref|YP_004457780.1|	-	0.1	12.2	0.7	0.74	9.5	0.1	2.5	2	1	0	2	2	2	0	DbpA	RNA	binding	domain
PGM_PMM_I	PF02878.11	gi|332796281|ref|YP_004457781.1|	-	9.4e-45	151.4	0.1	1.9e-44	150.5	0.1	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|332796281|ref|YP_004457781.1|	-	1.1e-21	77.1	0.0	2.8e-21	75.8	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|332796281|ref|YP_004457781.1|	-	1e-17	64.2	0.0	1.9e-17	63.3	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|332796281|ref|YP_004457781.1|	-	1.3e-13	50.7	0.0	4.9e-13	48.8	0.0	2.0	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF2007	PF09413.5	gi|332796281|ref|YP_004457781.1|	-	0.0084	15.9	0.1	0.23	11.3	0.0	2.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF2007)
CRS1_YhbY	PF01985.16	gi|332796281|ref|YP_004457781.1|	-	0.12	12.3	0.4	22	5.1	0.0	2.5	2	0	0	2	2	2	0	CRS1	/	YhbY	(CRM)	domain
Trm112p	PF03966.11	gi|332796282|ref|YP_004457782.1|	-	9.1e-20	70.7	3.4	1.4e-19	70.1	2.4	1.3	1	0	0	1	1	1	1	Trm112p-like	protein
Prok-RING_1	PF14446.1	gi|332796282|ref|YP_004457782.1|	-	0.0041	16.8	2.0	0.91	9.3	0.6	2.3	2	0	0	2	2	2	2	Prokaryotic	RING	finger	family	1
zf-UDP	PF14569.1	gi|332796282|ref|YP_004457782.1|	-	0.0058	16.3	1.2	0.0058	16.3	0.9	1.8	1	1	1	2	2	2	1	Zinc-binding	RING-finger
Cys_rich_KTR	PF14205.1	gi|332796282|ref|YP_004457782.1|	-	0.2	11.1	4.5	2.8	7.4	0.1	2.7	3	0	0	3	3	3	0	Cysteine-rich	KTR
zf-RING_5	PF14634.1	gi|332796282|ref|YP_004457782.1|	-	1.4	8.7	5.5	3	7.6	1.1	2.4	2	0	0	2	2	2	0	zinc-RING	finger	domain
DZR	PF12773.2	gi|332796282|ref|YP_004457782.1|	-	6.9	6.5	9.8	53	3.7	6.9	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2153	PF09921.4	gi|332796283|ref|YP_004457783.1|	-	4.6e-50	168.4	5.7	5.3e-50	168.2	3.9	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
zf-CpG_bind_C	PF12269.3	gi|332796283|ref|YP_004457783.1|	-	0.13	11.7	0.7	0.23	10.9	0.2	1.7	1	1	1	2	2	2	0	CpG	binding	protein	zinc	finger	C	terminal	domain
CAF1	PF04857.15	gi|332796284|ref|YP_004457784.1|	-	0.11	11.8	0.0	0.16	11.2	0.0	1.3	1	0	0	1	1	1	0	CAF1	family	ribonuclease
OMPdecase	PF00215.19	gi|332796285|ref|YP_004457785.1|	-	3.3e-20	72.4	3.8	4.3e-20	72.0	2.6	1.2	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
HMGL-like	PF00682.14	gi|332796285|ref|YP_004457785.1|	-	0.00045	19.9	0.4	0.0015	18.2	0.2	1.7	1	1	1	2	2	2	1	HMGL-like
QRPTase_C	PF01729.14	gi|332796285|ref|YP_004457785.1|	-	0.0046	16.4	3.8	0.013	15.0	1.6	2.3	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TIM-br_sig_trns	PF09370.5	gi|332796285|ref|YP_004457785.1|	-	0.01	14.9	0.2	0.02	13.9	0.1	1.6	1	1	0	1	1	1	0	TIM-barrel	signal	transduction	protein
GDPD	PF03009.12	gi|332796285|ref|YP_004457785.1|	-	0.031	13.7	0.1	0.073	12.5	0.0	1.6	1	1	1	2	2	2	0	Glycerophosphoryl	diester	phosphodiesterase	family
CTP_synth_N	PF06418.9	gi|332796286|ref|YP_004457786.1|	-	2.7e-128	426.8	2.1	3.8e-128	426.3	1.4	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|332796286|ref|YP_004457786.1|	-	2e-51	174.1	0.0	4.5e-51	173.0	0.0	1.6	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|332796286|ref|YP_004457786.1|	-	3.4e-11	42.9	0.0	9.1e-11	41.6	0.0	1.7	2	0	0	2	2	2	1	Peptidase	C26
CbiA	PF01656.18	gi|332796286|ref|YP_004457786.1|	-	9.6e-09	34.9	0.1	1.8e-08	33.9	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|332796286|ref|YP_004457786.1|	-	0.016	14.2	3.6	0.066	12.2	0.7	2.4	1	1	0	2	2	2	0	Anion-transporting	ATPase
YajC	PF02699.10	gi|332796286|ref|YP_004457786.1|	-	0.076	12.6	0.3	1.8	8.3	0.0	2.5	2	0	0	2	2	2	0	Preprotein	translocase	subunit
HTH_5	PF01022.15	gi|332796287|ref|YP_004457787.1|	-	4.2e-10	39.1	0.1	7.9e-10	38.2	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|332796287|ref|YP_004457787.1|	-	1.4e-07	31.2	0.0	2e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|332796287|ref|YP_004457787.1|	-	5.2e-06	26.0	0.0	8e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|332796287|ref|YP_004457787.1|	-	3.3e-05	24.1	0.0	6.5e-05	23.1	0.0	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|332796287|ref|YP_004457787.1|	-	5.9e-05	23.0	0.2	0.00012	22.0	0.1	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|332796287|ref|YP_004457787.1|	-	8.4e-05	22.2	0.2	0.00014	21.5	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|332796287|ref|YP_004457787.1|	-	0.00011	21.5	0.5	0.00011	21.5	0.4	1.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|332796287|ref|YP_004457787.1|	-	0.00027	20.5	0.2	0.00041	20.0	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
ArsR	PF09824.4	gi|332796287|ref|YP_004457787.1|	-	0.0084	15.4	0.1	0.0096	15.2	0.0	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
DUF742	PF05331.6	gi|332796287|ref|YP_004457787.1|	-	0.0085	15.6	0.0	0.0099	15.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF742)
HTH_11	PF08279.7	gi|332796287|ref|YP_004457787.1|	-	0.012	15.1	0.2	0.019	14.5	0.1	1.4	1	0	0	1	1	1	0	HTH	domain
HTH_Crp_2	PF13545.1	gi|332796287|ref|YP_004457787.1|	-	0.02	14.6	0.8	0.08	12.7	0.5	2.1	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.1	gi|332796287|ref|YP_004457787.1|	-	0.03	13.9	0.1	0.05	13.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|332796287|ref|YP_004457787.1|	-	0.039	13.5	0.0	0.069	12.7	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|332796287|ref|YP_004457787.1|	-	0.042	13.5	0.1	0.074	12.7	0.1	1.3	1	1	0	1	1	1	0	CDC6,	C	terminal
LSM	PF01423.17	gi|332796288|ref|YP_004457788.1|	-	9.9e-19	66.6	0.2	1.2e-18	66.3	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
Herpes_MCP	PF03122.9	gi|332796288|ref|YP_004457788.1|	-	0.091	10.0	0.0	0.093	10.0	0.0	1.0	1	0	0	1	1	1	0	Herpes	virus	major	capsid	protein
SM-ATX	PF14438.1	gi|332796288|ref|YP_004457788.1|	-	0.098	12.5	0.0	0.13	12.1	0.0	1.2	1	0	0	1	1	1	0	Ataxin	2	SM	domain
AdoMet_Synthase	PF01941.14	gi|332796289|ref|YP_004457789.1|	-	4.7e-169	562.0	5.3	5.2e-169	561.9	3.7	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
DUF460	PF04312.8	gi|332796290|ref|YP_004457790.1|	-	1.9e-47	160.2	3.0	1.9e-47	160.2	0.6	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF460)
Fib_alpha	PF08702.5	gi|332796290|ref|YP_004457790.1|	-	3.3	7.8	19.3	0.032	14.3	4.9	3.2	3	1	0	3	3	3	0	Fibrinogen	alpha/beta	chain	family
RIO1	PF01163.17	gi|332796291|ref|YP_004457791.1|	-	1.2e-35	122.5	0.0	1.8e-35	121.9	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.20	gi|332796291|ref|YP_004457791.1|	-	8e-07	28.4	0.0	1.5e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|332796291|ref|YP_004457791.1|	-	6.2e-06	26.1	0.0	0.0015	18.2	0.0	2.2	2	0	0	2	2	2	2	Phosphotransferase	enzyme	family
Rio2_N	PF09202.6	gi|332796291|ref|YP_004457791.1|	-	8e-05	22.6	0.3	0.00023	21.1	0.2	1.8	1	0	0	1	1	1	1	Rio2,	N-terminal
HTH_34	PF13601.1	gi|332796291|ref|YP_004457791.1|	-	0.029	14.4	0.1	0.062	13.3	0.1	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4187	PF13821.1	gi|332796291|ref|YP_004457791.1|	-	0.17	11.5	0.6	0.7	9.5	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
FbpA	PF05833.6	gi|332796292|ref|YP_004457792.1|	-	8.1e-27	93.8	34.6	3.8e-14	52.0	1.4	2.1	1	1	1	2	2	2	2	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|332796292|ref|YP_004457792.1|	-	1.4e-26	92.2	0.0	3.7e-26	90.8	0.0	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
Sec20	PF03908.8	gi|332796292|ref|YP_004457792.1|	-	0.0047	16.5	1.2	0.0047	16.5	0.8	3.1	4	0	0	4	4	4	1	Sec20
AKNA	PF12443.3	gi|332796292|ref|YP_004457792.1|	-	0.0092	15.9	1.9	0.0092	15.9	1.3	2.5	1	1	1	2	2	2	1	AT-hook-containing	transcription	factor
HBS1_N	PF08938.5	gi|332796292|ref|YP_004457792.1|	-	0.028	14.5	2.2	0.12	12.4	1.5	2.1	1	0	0	1	1	1	0	HBS1	N-terminus
Tweety	PF04906.8	gi|332796292|ref|YP_004457792.1|	-	0.034	12.5	6.3	0.24	9.7	4.4	2.0	1	1	0	1	1	1	0	Tweety
COG2	PF06148.6	gi|332796292|ref|YP_004457792.1|	-	0.24	11.2	12.3	0.033	14.0	0.9	3.6	4	0	0	4	4	4	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
COG5	PF10392.4	gi|332796292|ref|YP_004457792.1|	-	0.25	11.3	4.5	0.74	9.7	0.7	2.5	2	0	0	2	2	2	0	Golgi	transport	complex	subunit	5
RP-C_C	PF11800.3	gi|332796292|ref|YP_004457792.1|	-	2.2	7.9	7.8	4.2	7.0	5.4	1.4	1	0	0	1	1	1	0	Replication	protein	C	C-terminal	region
Barstar	PF01337.13	gi|332796292|ref|YP_004457792.1|	-	3.7	7.4	5.7	2.6	7.9	0.2	3.2	4	0	0	4	4	4	0	Barstar	(barnase	inhibitor)
IncA	PF04156.9	gi|332796292|ref|YP_004457792.1|	-	7	6.1	23.6	0.083	12.4	7.2	2.7	3	0	0	3	3	3	0	IncA	protein
SPC12	PF06645.8	gi|332796293|ref|YP_004457793.1|	-	0.03	14.1	2.9	0.036	13.8	1.7	1.4	1	1	0	1	1	1	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
7TMR-DISM_7TM	PF07695.6	gi|332796293|ref|YP_004457793.1|	-	0.13	11.8	13.7	0.14	11.7	9.5	1.0	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
Mut7-C	PF01927.11	gi|332796294|ref|YP_004457794.1|	-	5.1e-38	130.3	5.1	1.2e-36	125.8	3.5	2.1	1	1	0	1	1	1	1	Mut7-C	RNAse	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796294|ref|YP_004457794.1|	-	0.0047	16.5	0.2	0.015	14.9	0.2	1.9	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
PIN_4	PF13638.1	gi|332796294|ref|YP_004457794.1|	-	0.043	13.9	0.1	0.26	11.3	0.0	2.0	2	0	0	2	2	2	0	PIN	domain
C1_1	PF00130.17	gi|332796294|ref|YP_004457794.1|	-	0.056	13.1	1.2	0.1	12.3	0.8	1.4	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF2296	PF10058.4	gi|332796294|ref|YP_004457794.1|	-	0.12	12.1	0.9	0.24	11.1	0.6	1.5	1	0	0	1	1	1	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Mu-like_Com	PF10122.4	gi|332796294|ref|YP_004457794.1|	-	0.33	10.0	3.1	0.7	8.9	2.2	1.5	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
PHD_2	PF13831.1	gi|332796294|ref|YP_004457794.1|	-	0.38	10.0	3.8	0.79	9.0	2.6	1.6	1	0	0	1	1	1	0	PHD-finger
Rep_fac-A_C	PF08646.5	gi|332796294|ref|YP_004457794.1|	-	1	9.0	5.8	1.4	8.6	3.5	1.5	1	1	0	1	1	1	0	Replication	factor-A	C	terminal	domain
AMMECR1	PF01871.12	gi|332796295|ref|YP_004457795.1|	-	1.9e-57	193.0	0.0	2.3e-57	192.8	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
MmoB_DmpM	PF02406.12	gi|332796295|ref|YP_004457795.1|	-	0.071	13.1	0.4	0.52	10.3	0.1	2.1	2	0	0	2	2	2	0	MmoB/DmpM	family
DUF4558	PF15104.1	gi|332796295|ref|YP_004457795.1|	-	0.12	12.2	0.0	0.2	11.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4558)
Thioredoxin_3	PF13192.1	gi|332796296|ref|YP_004457796.1|	-	3e-27	94.2	4.1	2.7e-17	62.3	1.2	2.3	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin	PF00085.15	gi|332796296|ref|YP_004457796.1|	-	4.1e-06	26.3	1.7	0.0065	16.1	0.4	2.4	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_2	PF13098.1	gi|332796296|ref|YP_004457796.1|	-	0.00018	21.6	4.4	0.61	10.3	0.2	3.9	2	2	0	2	2	2	2	Thioredoxin-like	domain
Methyltransf_14	PF08484.6	gi|332796296|ref|YP_004457796.1|	-	0.0012	18.4	0.0	0.0022	17.5	0.0	1.5	1	0	0	1	1	1	1	C-methyltransferase	C-terminal	domain
TrbC_Ftype	PF09673.5	gi|332796296|ref|YP_004457796.1|	-	0.0067	16.0	0.4	0.49	10.0	0.1	2.7	2	1	0	2	2	2	1	Type-F	conjugative	transfer	system	pilin	assembly	protein
Thioredoxin_8	PF13905.1	gi|332796296|ref|YP_004457796.1|	-	0.019	15.0	0.7	8.2	6.6	0.0	3.5	2	2	0	2	2	2	0	Thioredoxin-like
Glutaredoxin	PF00462.19	gi|332796296|ref|YP_004457796.1|	-	0.027	14.4	9.4	0.43	10.6	1.3	3.7	2	2	1	3	3	3	0	Glutaredoxin
ABC_transp_aux	PF09822.4	gi|332796296|ref|YP_004457796.1|	-	0.052	13.0	0.0	0.46	9.8	0.0	2.0	2	0	0	2	2	2	0	ABC-type	uncharacterized	transport	system
Thioredoxin_4	PF13462.1	gi|332796296|ref|YP_004457796.1|	-	0.3	11.0	4.7	0.69	9.8	0.1	3.0	3	1	1	4	4	4	0	Thioredoxin
zf-CHCC	PF10276.4	gi|332796296|ref|YP_004457796.1|	-	1.1	9.1	6.5	0.51	10.2	0.4	2.4	2	0	0	2	2	2	0	Zinc-finger	domain
Tmemb_cc2	PF10267.4	gi|332796297|ref|YP_004457797.1|	-	0.00084	18.0	1.6	0.0016	17.0	1.1	1.6	1	0	0	1	1	1	1	Predicted	transmembrane	and	coiled-coil	2	protein
Herpes_UL6	PF01763.11	gi|332796297|ref|YP_004457797.1|	-	0.00091	17.5	2.2	0.0012	17.0	1.5	1.2	1	0	0	1	1	1	1	Herpesvirus	UL6	like
Phasin	PF05597.6	gi|332796297|ref|YP_004457797.1|	-	0.0062	16.2	1.1	0.041	13.6	0.1	2.3	2	0	0	2	2	2	1	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Fe-S_assembly	PF04384.8	gi|332796297|ref|YP_004457797.1|	-	0.0085	16.4	0.7	0.024	14.9	0.5	1.8	1	0	0	1	1	1	1	Iron-sulphur	cluster	assembly
Osmo_CC	PF08946.5	gi|332796297|ref|YP_004457797.1|	-	0.009	16.0	2.1	0.009	16.0	1.4	2.9	3	0	0	3	3	2	1	Osmosensory	transporter	coiled	coil
Fzo_mitofusin	PF04799.8	gi|332796297|ref|YP_004457797.1|	-	0.011	15.1	1.1	0.011	15.1	0.8	1.6	2	0	0	2	2	2	0	fzo-like	conserved	region
TMF_DNA_bd	PF12329.3	gi|332796297|ref|YP_004457797.1|	-	0.015	15.0	6.9	0.015	15.0	4.8	2.7	3	0	0	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
DUF1664	PF07889.7	gi|332796297|ref|YP_004457797.1|	-	0.024	14.4	1.9	0.054	13.3	0.2	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1664)
TSC22	PF01166.13	gi|332796297|ref|YP_004457797.1|	-	0.032	14.1	3.5	0.051	13.5	1.3	2.2	2	0	0	2	2	1	0	TSC-22/dip/bun	family
DUF3782	PF12644.2	gi|332796297|ref|YP_004457797.1|	-	0.034	13.9	1.4	5.8	6.7	1.0	2.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
AAA_32	PF13654.1	gi|332796297|ref|YP_004457797.1|	-	0.051	12.2	5.0	0.033	12.8	2.5	1.4	1	1	0	1	1	1	0	AAA	domain
Matrilin_ccoil	PF10393.4	gi|332796297|ref|YP_004457797.1|	-	0.055	12.8	3.0	0.45	9.9	0.5	2.6	1	1	1	2	2	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
MCLC	PF05934.6	gi|332796297|ref|YP_004457797.1|	-	0.058	11.6	1.3	0.079	11.2	0.9	1.3	1	0	0	1	1	1	0	Mid-1-related	chloride	channel	(MCLC)
Hemagglutinin	PF00509.13	gi|332796297|ref|YP_004457797.1|	-	0.062	11.4	1.8	0.1	10.7	1.2	1.3	1	0	0	1	1	1	0	Haemagglutinin
Laminin_II	PF06009.7	gi|332796297|ref|YP_004457797.1|	-	0.072	12.8	4.2	0.35	10.6	1.0	2.3	2	0	0	2	2	2	0	Laminin	Domain	II
RP-C_C	PF11800.3	gi|332796297|ref|YP_004457797.1|	-	0.11	12.1	0.9	0.13	11.9	0.6	1.2	1	0	0	1	1	1	0	Replication	protein	C	C-terminal	region
DUF4094	PF13334.1	gi|332796297|ref|YP_004457797.1|	-	0.16	12.3	1.8	0.26	11.6	0.4	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4094)
DUF4407	PF14362.1	gi|332796297|ref|YP_004457797.1|	-	0.2	10.5	3.0	0.31	9.9	2.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
GLE1	PF07817.8	gi|332796297|ref|YP_004457797.1|	-	0.25	10.2	3.6	0.44	9.4	2.5	1.4	1	0	0	1	1	1	0	GLE1-like	protein
Baculo_PEP_C	PF04513.7	gi|332796297|ref|YP_004457797.1|	-	0.3	10.9	1.7	0.32	10.8	0.4	1.6	2	0	0	2	2	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Ax_dynein_light	PF10211.4	gi|332796297|ref|YP_004457797.1|	-	0.33	10.7	6.6	0.87	9.4	4.6	1.8	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
DUF904	PF06005.7	gi|332796297|ref|YP_004457797.1|	-	0.53	10.6	12.9	0.039	14.2	3.7	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF904)
AATF-Che1	PF13339.1	gi|332796297|ref|YP_004457797.1|	-	1.1	9.4	8.4	0.28	11.3	3.3	1.8	2	0	0	2	2	2	0	Apoptosis	antagonizing	transcription	factor
DUF972	PF06156.8	gi|332796297|ref|YP_004457797.1|	-	1.3	9.3	6.5	1.3	9.4	2.8	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
NPV_P10	PF05531.7	gi|332796297|ref|YP_004457797.1|	-	1.8	8.8	4.9	1.4	9.2	2.0	2.0	2	1	0	2	2	1	0	Nucleopolyhedrovirus	P10	protein
DASH_Dad3	PF08656.5	gi|332796297|ref|YP_004457797.1|	-	1.9	8.2	6.7	17	5.1	0.7	3.3	2	1	1	3	3	3	0	DASH	complex	subunit	Dad3
Fib_alpha	PF08702.5	gi|332796297|ref|YP_004457797.1|	-	6.2	6.9	8.9	0.57	10.3	1.6	2.3	2	1	1	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Pox_A_type_inc	PF04508.7	gi|332796297|ref|YP_004457797.1|	-	6.5	6.8	7.3	0.76	9.7	0.5	3.0	4	0	0	4	4	2	0	Viral	A-type	inclusion	protein	repeat
Uds1	PF15456.1	gi|332796297|ref|YP_004457797.1|	-	7.6	6.5	8.4	0.39	10.6	1.4	2.1	3	1	0	3	3	2	0	Up-regulated	During	Septation
IncA	PF04156.9	gi|332796297|ref|YP_004457797.1|	-	8.1	5.9	12.5	3.6	7.1	6.7	2.0	1	1	0	1	1	1	0	IncA	protein
FlxA	PF14282.1	gi|332796297|ref|YP_004457797.1|	-	8.6	6.3	16.8	28	4.6	8.4	3.2	2	1	0	2	2	2	0	FlxA-like	protein
dUTPase	PF00692.14	gi|332796298|ref|YP_004457798.1|	-	2.6e-28	98.0	0.0	3.3e-28	97.7	0.0	1.1	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|332796298|ref|YP_004457798.1|	-	9.1e-07	27.5	0.0	3.8e-06	25.5	0.0	2.1	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
DNA_ligase_A_M	PF01068.16	gi|332796299|ref|YP_004457799.1|	-	7.5e-61	205.0	0.2	1.2e-60	204.4	0.1	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|332796299|ref|YP_004457799.1|	-	2.6e-54	183.6	0.5	4.8e-54	182.8	0.3	1.5	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|332796299|ref|YP_004457799.1|	-	4e-26	91.2	0.0	1e-25	89.9	0.0	1.7	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
Lactamase_B_2	PF12706.2	gi|332796300|ref|YP_004457800.1|	-	2e-08	34.0	0.1	8.6e-08	31.9	0.0	1.8	1	1	1	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|332796300|ref|YP_004457800.1|	-	0.0041	16.7	0.2	0.011	15.4	0.1	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DRMBL	PF07522.9	gi|332796300|ref|YP_004457800.1|	-	0.034	14.1	0.2	0.084	12.9	0.2	1.6	1	0	0	1	1	1	0	DNA	repair	metallo-beta-lactamase
CBS	PF00571.23	gi|332796300|ref|YP_004457800.1|	-	0.053	13.3	0.1	0.44	10.3	0.0	2.4	2	0	0	2	2	2	0	CBS	domain
FTP	PF07504.8	gi|332796300|ref|YP_004457800.1|	-	0.18	11.3	2.5	0.3	10.5	0.8	2.1	2	0	0	2	2	2	0	Fungalysin/Thermolysin	Propeptide	Motif
DAO	PF01266.19	gi|332796301|ref|YP_004457801.1|	-	2.7e-53	181.1	0.0	3.1e-53	180.9	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332796301|ref|YP_004457801.1|	-	7e-07	29.5	0.0	7.5e-05	22.8	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332796301|ref|YP_004457801.1|	-	2.8e-06	26.4	0.8	0.00012	21.0	0.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|332796301|ref|YP_004457801.1|	-	1e-05	24.6	0.0	0.052	12.3	0.0	2.1	2	0	0	2	2	2	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|332796301|ref|YP_004457801.1|	-	0.0026	17.7	0.4	0.0057	16.6	0.2	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|332796301|ref|YP_004457801.1|	-	0.0031	16.6	0.1	0.0061	15.6	0.1	1.5	1	0	0	1	1	1	1	Thi4	family
Pyr_redox_2	PF07992.9	gi|332796301|ref|YP_004457801.1|	-	0.005	16.7	0.1	0.83	9.4	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.15	gi|332796301|ref|YP_004457801.1|	-	0.0052	16.8	0.9	0.012	15.7	0.6	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_9	PF13454.1	gi|332796301|ref|YP_004457801.1|	-	0.0057	16.4	0.0	0.021	14.6	0.0	1.8	2	0	0	2	2	2	1	FAD-NAD(P)-binding
ThiF	PF00899.16	gi|332796301|ref|YP_004457801.1|	-	0.0074	16.1	0.0	0.014	15.2	0.0	1.5	1	0	0	1	1	1	1	ThiF	family
FAD_binding_3	PF01494.14	gi|332796301|ref|YP_004457801.1|	-	0.043	12.8	1.0	0.063	12.3	0.7	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|332796301|ref|YP_004457801.1|	-	0.18	10.6	0.0	1.7	7.4	0.1	2.0	2	0	0	2	2	2	0	Lycopene	cyclase	protein
HI0933_like	PF03486.9	gi|332796301|ref|YP_004457801.1|	-	0.23	9.9	1.1	9.9	4.5	0.0	2.1	2	0	0	2	2	2	0	HI0933-like	protein
Fer2_BFD	PF04324.10	gi|332796302|ref|YP_004457802.1|	-	9e-06	25.6	0.3	2.2e-05	24.4	0.2	1.6	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
Pyr_redox_2	PF07992.9	gi|332796302|ref|YP_004457802.1|	-	7.3e-05	22.7	0.0	0.014	15.2	0.0	2.3	1	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Phosphodiest	PF01663.17	gi|332796303|ref|YP_004457803.1|	-	4.5e-35	121.6	0.2	1.3e-17	64.1	0.0	2.1	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|332796303|ref|YP_004457803.1|	-	0.0008	19.1	0.0	0.084	12.5	0.0	2.6	2	1	1	3	3	3	2	PglZ	domain
Sulfatase	PF00884.18	gi|332796303|ref|YP_004457803.1|	-	0.0026	17.0	0.0	0.053	12.6	0.0	2.5	3	0	0	3	3	3	1	Sulfatase
Tcp11	PF05794.8	gi|332796304|ref|YP_004457804.1|	-	0.05	12.3	0.1	0.063	11.9	0.1	1.2	1	0	0	1	1	1	0	T-complex	protein	11
HEM4	PF02602.10	gi|332796305|ref|YP_004457805.1|	-	6.5e-24	84.4	0.0	7.7e-24	84.2	0.0	1.1	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
DNA_pol_lambd_f	PF10391.4	gi|332796305|ref|YP_004457805.1|	-	0.0052	16.3	0.0	0.33	10.5	0.0	2.6	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
Porphobil_deam	PF01379.15	gi|332796306|ref|YP_004457806.1|	-	4.4e-55	185.9	0.1	5.3e-55	185.6	0.1	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|332796306|ref|YP_004457806.1|	-	2.8e-07	30.5	0.0	6.9e-07	29.2	0.0	1.6	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
Aminotran_3	PF00202.16	gi|332796307|ref|YP_004457807.1|	-	5.4e-73	245.7	0.0	6.9e-73	245.4	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Phos_pyr_kin	PF08543.7	gi|332796307|ref|YP_004457807.1|	-	0.00051	19.3	0.1	0.31	10.2	0.0	2.5	2	0	0	2	2	2	2	Phosphomethylpyrimidine	kinase
Aminotran_1_2	PF00155.16	gi|332796307|ref|YP_004457807.1|	-	0.0026	16.7	0.0	0.0034	16.4	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
ALAD	PF00490.16	gi|332796308|ref|YP_004457808.1|	-	3.3e-135	450.1	0.6	3.7e-135	449.9	0.4	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
GlutR_N	PF05201.10	gi|332796309|ref|YP_004457809.1|	-	1.1e-33	115.9	0.9	2.3e-33	114.9	0.1	1.9	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.15	gi|332796309|ref|YP_004457809.1|	-	5.6e-19	67.9	1.0	5.6e-19	67.9	0.7	2.1	1	1	1	2	2	2	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
Shikimate_DH	PF01488.15	gi|332796309|ref|YP_004457809.1|	-	2.2e-17	63.4	0.2	1.7e-16	60.5	0.0	2.5	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|332796309|ref|YP_004457809.1|	-	6.8e-08	32.8	0.0	2e-07	31.3	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.13	gi|332796309|ref|YP_004457809.1|	-	2e-05	24.5	0.0	6.2e-05	22.9	0.0	1.8	1	0	0	1	1	1	1	TrkA-N	domain
NAD_binding_2	PF03446.10	gi|332796309|ref|YP_004457809.1|	-	7.1e-05	22.6	0.0	0.00025	20.9	0.0	1.9	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|332796309|ref|YP_004457809.1|	-	0.00013	21.1	0.1	0.00029	20.0	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|332796309|ref|YP_004457809.1|	-	0.00034	19.7	0.0	0.00053	19.0	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
NAD_binding_7	PF13241.1	gi|332796309|ref|YP_004457809.1|	-	0.00065	19.9	0.1	0.0025	18.0	0.0	2.0	2	0	0	2	2	2	1	Putative	NAD(P)-binding
ThiF	PF00899.16	gi|332796309|ref|YP_004457809.1|	-	0.00099	18.9	0.6	0.007	16.1	0.0	2.4	2	1	0	2	2	2	1	ThiF	family
GFO_IDH_MocA	PF01408.17	gi|332796309|ref|YP_004457809.1|	-	0.0013	19.2	0.0	0.0028	18.1	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ApbA	PF02558.11	gi|332796309|ref|YP_004457809.1|	-	0.0013	18.1	0.0	0.0032	16.9	0.0	1.7	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|332796309|ref|YP_004457809.1|	-	0.012	15.3	0.0	0.065	12.9	0.0	2.3	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
T4_baseplate	PF12322.3	gi|332796309|ref|YP_004457809.1|	-	0.012	14.8	3.7	0.031	13.5	2.5	1.6	1	1	0	1	1	1	0	T4	bacteriophage	base	plate	protein
Pyr_redox	PF00070.22	gi|332796309|ref|YP_004457809.1|	-	0.022	15.1	0.2	0.34	11.3	0.0	3.1	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|332796309|ref|YP_004457809.1|	-	0.034	13.5	0.0	0.093	12.1	0.0	1.8	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|332796309|ref|YP_004457809.1|	-	0.035	13.6	0.2	0.035	13.6	0.2	1.9	2	0	0	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
FliG_C	PF01706.11	gi|332796309|ref|YP_004457809.1|	-	0.039	13.9	2.5	0.098	12.6	1.4	2.0	1	1	0	1	1	1	0	FliG	C-terminal	domain
3HCDH_N	PF02737.13	gi|332796309|ref|YP_004457809.1|	-	0.044	13.4	0.3	0.2	11.3	0.0	2.3	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Maelstrom	PF13017.1	gi|332796309|ref|YP_004457809.1|	-	0.12	11.8	2.5	0.12	11.8	0.1	2.1	2	0	0	2	2	2	0	piRNA	pathway	germ-plasm	component
DUF2115	PF09888.4	gi|332796309|ref|YP_004457809.1|	-	5.2	7.1	9.0	2.3	8.3	4.0	2.1	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
NAD_binding_7	PF13241.1	gi|332796310|ref|YP_004457810.1|	-	1.5e-26	92.6	0.0	3.8e-26	91.3	0.0	1.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|332796310|ref|YP_004457810.1|	-	9.1e-06	25.6	0.3	4.2e-05	23.5	0.1	2.2	2	1	0	2	2	2	1	TrkA-N	domain
Pyr_redox	PF00070.22	gi|332796310|ref|YP_004457810.1|	-	0.00063	20.0	0.0	0.0017	18.6	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_10	PF13460.1	gi|332796310|ref|YP_004457810.1|	-	0.0028	17.6	0.0	0.0042	17.1	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
Shikimate_DH	PF01488.15	gi|332796310|ref|YP_004457810.1|	-	0.0029	17.6	0.0	0.006	16.6	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|332796310|ref|YP_004457810.1|	-	0.012	14.7	0.0	0.022	13.9	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Spermine_synth	PF01564.12	gi|332796310|ref|YP_004457810.1|	-	0.015	14.2	0.0	0.031	13.2	0.0	1.5	1	0	0	1	1	1	0	Spermine/spermidine	synthase
ThiF	PF00899.16	gi|332796310|ref|YP_004457810.1|	-	0.042	13.6	1.7	1.1	9.0	0.0	2.4	1	1	1	2	2	2	0	ThiF	family
dTMP_synthase	PF02593.9	gi|332796310|ref|YP_004457810.1|	-	0.083	12.2	0.0	0.13	11.5	0.0	1.3	1	0	0	1	1	1	0	Thymidylate	synthase
ELFV_dehydrog	PF00208.16	gi|332796310|ref|YP_004457810.1|	-	0.086	12.4	0.0	0.22	11.0	0.0	1.6	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
FIVAR	PF07554.8	gi|332796310|ref|YP_004457810.1|	-	0.14	12.4	1.7	3.2	8.0	0.1	2.7	2	0	0	2	2	2	0	Uncharacterised	Sugar-binding	Domain
F420_oxidored	PF03807.12	gi|332796310|ref|YP_004457810.1|	-	0.14	12.6	0.0	0.28	11.6	0.0	1.5	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
XPG_I	PF00867.13	gi|332796311|ref|YP_004457811.1|	-	5.9e-28	96.7	0.0	1.4e-27	95.6	0.0	1.6	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|332796311|ref|YP_004457811.1|	-	1.3e-22	79.9	0.0	2.5e-22	79.0	0.0	1.5	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|332796311|ref|YP_004457811.1|	-	6.2e-05	23.1	1.8	0.00014	22.0	0.0	2.3	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
DUF2458	PF10454.4	gi|332796311|ref|YP_004457811.1|	-	0.0045	16.8	3.5	0.0067	16.3	0.5	2.4	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF2458)
La	PF05383.12	gi|332796312|ref|YP_004457812.1|	-	0.072	12.8	0.0	0.17	11.6	0.0	1.7	1	1	1	2	2	2	0	La	domain
AAA	PF00004.24	gi|332796313|ref|YP_004457813.1|	-	1.9e-98	325.7	0.0	2.3e-49	166.9	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|332796313|ref|YP_004457813.1|	-	2.7e-32	110.5	1.5	6.5e-31	106.1	1.2	2.7	3	0	0	3	3	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|332796313|ref|YP_004457813.1|	-	1.2e-15	57.2	0.0	9.4e-08	31.3	0.0	2.9	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
CDC48_2	PF02933.12	gi|332796313|ref|YP_004457813.1|	-	1.2e-14	53.6	1.6	1.2e-14	53.6	1.1	2.1	3	0	0	3	3	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_22	PF13401.1	gi|332796313|ref|YP_004457813.1|	-	2.1e-13	50.5	0.8	7.4e-05	22.9	0.1	4.3	2	2	0	2	2	2	2	AAA	domain
AAA_2	PF07724.9	gi|332796313|ref|YP_004457813.1|	-	2.5e-13	50.2	0.0	3.5e-06	27.0	0.0	2.8	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.9	gi|332796313|ref|YP_004457813.1|	-	4e-13	49.2	1.7	4.7e-05	23.1	0.1	4.8	3	2	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|332796313|ref|YP_004457813.1|	-	1e-11	45.1	0.0	9.8e-05	22.4	0.0	3.4	2	2	0	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|332796313|ref|YP_004457813.1|	-	1.1e-11	45.6	0.0	1.8e-05	25.5	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|332796313|ref|YP_004457813.1|	-	1.9e-11	43.3	0.0	7.2e-05	21.6	0.0	2.8	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_33	PF13671.1	gi|332796313|ref|YP_004457813.1|	-	2.9e-11	43.4	0.0	9.1e-05	22.3	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|332796313|ref|YP_004457813.1|	-	3e-10	40.0	0.0	0.00072	19.4	0.0	3.0	3	0	0	3	3	3	2	AAA	domain
Zeta_toxin	PF06414.7	gi|332796313|ref|YP_004457813.1|	-	6.7e-10	38.3	0.0	0.00039	19.5	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|332796313|ref|YP_004457813.1|	-	2e-09	37.1	0.0	0.0014	18.0	0.0	2.7	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|332796313|ref|YP_004457813.1|	-	4.2e-08	33.1	0.1	0.0096	15.6	0.0	4.3	2	2	2	4	4	4	1	Archaeal	ATPase
AAA_28	PF13521.1	gi|332796313|ref|YP_004457813.1|	-	4.7e-08	33.1	0.0	0.015	15.2	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|332796313|ref|YP_004457813.1|	-	7.2e-08	32.0	2.2	0.012	14.9	0.0	3.5	2	1	1	3	3	3	2	AAA	domain
AAA_19	PF13245.1	gi|332796313|ref|YP_004457813.1|	-	7.6e-08	31.9	1.6	0.0054	16.4	0.1	3.0	2	0	0	2	2	2	2	Part	of	AAA	domain
Mg_chelatase	PF01078.16	gi|332796313|ref|YP_004457813.1|	-	1.8e-07	30.5	1.1	0.0072	15.5	0.1	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|332796313|ref|YP_004457813.1|	-	2.4e-07	31.0	0.0	0.029	14.6	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|332796313|ref|YP_004457813.1|	-	1.6e-06	28.1	0.0	0.068	13.2	0.0	2.9	3	0	0	3	3	2	2	Sigma-54	interaction	domain
Sigma54_activat	PF00158.21	gi|332796313|ref|YP_004457813.1|	-	2.2e-06	27.2	0.1	0.075	12.4	0.0	3.6	3	1	0	3	3	2	2	Sigma-54	interaction	domain
RNA_helicase	PF00910.17	gi|332796313|ref|YP_004457813.1|	-	2.4e-06	27.6	0.0	0.057	13.6	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
AAA_24	PF13479.1	gi|332796313|ref|YP_004457813.1|	-	4e-06	26.5	0.2	0.037	13.6	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_3	PF07726.6	gi|332796313|ref|YP_004457813.1|	-	1.6e-05	24.5	0.0	0.1	12.1	0.0	3.0	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
PhoH	PF02562.11	gi|332796313|ref|YP_004457813.1|	-	1.9e-05	24.0	0.3	0.15	11.2	0.0	2.6	2	0	0	2	2	2	2	PhoH-like	protein
Vps4_C	PF09336.5	gi|332796313|ref|YP_004457813.1|	-	1.9e-05	24.4	1.8	0.0019	18.0	0.1	3.0	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
NACHT	PF05729.7	gi|332796313|ref|YP_004457813.1|	-	2.5e-05	23.9	0.6	0.45	10.1	0.1	3.4	3	0	0	3	3	3	2	NACHT	domain
ABC_tran	PF00005.22	gi|332796313|ref|YP_004457813.1|	-	4.8e-05	23.6	0.0	0.22	11.8	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
Parvo_NS1	PF01057.12	gi|332796313|ref|YP_004457813.1|	-	5.1e-05	22.2	0.1	0.11	11.3	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
KaiC	PF06745.8	gi|332796313|ref|YP_004457813.1|	-	6.9e-05	22.0	3.5	0.35	9.9	0.0	3.9	3	2	1	4	4	3	2	KaiC
DUF815	PF05673.8	gi|332796313|ref|YP_004457813.1|	-	8.6e-05	21.5	0.0	0.38	9.6	0.0	2.9	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
ATP-synt_ab	PF00006.20	gi|332796313|ref|YP_004457813.1|	-	9.8e-05	21.9	0.0	0.015	14.8	0.0	2.7	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NB-ARC	PF00931.17	gi|332796313|ref|YP_004457813.1|	-	0.00041	19.3	0.1	0.2	10.4	0.0	2.5	2	0	0	2	2	2	1	NB-ARC	domain
Bac_DnaA	PF00308.13	gi|332796313|ref|YP_004457813.1|	-	0.00089	18.9	0.0	0.26	10.8	0.0	3.2	3	1	0	3	3	2	1	Bacterial	dnaA	protein
NTPase_1	PF03266.10	gi|332796313|ref|YP_004457813.1|	-	0.0012	18.5	4.3	7.5	6.2	0.0	4.6	3	2	1	4	4	4	0	NTPase
UPF0079	PF02367.12	gi|332796313|ref|YP_004457813.1|	-	0.0013	18.3	0.1	2.3	7.8	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_11	PF13086.1	gi|332796313|ref|YP_004457813.1|	-	0.0016	18.0	0.1	1.9	7.9	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
DUF2075	PF09848.4	gi|332796313|ref|YP_004457813.1|	-	0.0018	17.3	0.0	0.34	9.8	0.0	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
IPT	PF01745.11	gi|332796313|ref|YP_004457813.1|	-	0.0062	15.7	0.1	0.88	8.6	0.0	2.4	2	0	0	2	2	2	1	Isopentenyl	transferase
AFG1_ATPase	PF03969.11	gi|332796313|ref|YP_004457813.1|	-	0.0062	15.3	0.0	2.3	6.9	0.0	2.4	2	0	0	2	2	2	1	AFG1-like	ATPase
UFD1	PF03152.9	gi|332796313|ref|YP_004457813.1|	-	0.007	15.5	0.0	0.015	14.4	0.0	1.5	1	0	0	1	1	1	1	Ubiquitin	fusion	degradation	protein	UFD1
AAA_30	PF13604.1	gi|332796313|ref|YP_004457813.1|	-	0.0088	15.6	0.1	4.2	6.8	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Guanylate_kin	PF00625.16	gi|332796313|ref|YP_004457813.1|	-	0.012	15.1	0.1	11	5.3	0.0	3.7	2	1	1	3	3	3	0	Guanylate	kinase
SKI	PF01202.17	gi|332796313|ref|YP_004457813.1|	-	0.016	15.0	0.0	6.9	6.5	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
T2SE	PF00437.15	gi|332796313|ref|YP_004457813.1|	-	0.023	13.6	0.0	6.5	5.5	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Viral_helicase1	PF01443.13	gi|332796313|ref|YP_004457813.1|	-	0.038	13.4	0.0	2.1	7.8	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
ResIII	PF04851.10	gi|332796313|ref|YP_004457813.1|	-	0.04	13.7	0.0	6.3	6.5	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PduV-EutP	PF10662.4	gi|332796313|ref|YP_004457813.1|	-	0.043	13.3	0.0	11	5.4	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_10	PF12846.2	gi|332796313|ref|YP_004457813.1|	-	0.049	13.0	1.7	3.3	7.0	0.1	3.1	2	2	0	3	3	3	0	AAA-like	domain
AAA_23	PF13476.1	gi|332796313|ref|YP_004457813.1|	-	0.052	13.8	0.0	8.2	6.6	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|332796313|ref|YP_004457813.1|	-	0.067	12.7	0.0	12	5.5	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
KTI12	PF08433.5	gi|332796313|ref|YP_004457813.1|	-	0.08	12.1	0.0	14	4.7	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
B5	PF03484.10	gi|332796313|ref|YP_004457813.1|	-	0.084	12.7	0.3	10	6.0	0.1	2.8	2	0	0	2	2	2	0	tRNA	synthetase	B5	domain
MCM	PF00493.18	gi|332796313|ref|YP_004457813.1|	-	0.093	11.5	0.0	31	3.2	0.0	3.3	3	0	0	3	3	3	0	MCM2/3/5	family
EF1_GNE	PF00736.14	gi|332796314|ref|YP_004457814.1|	-	6.3e-23	80.2	0.4	6.8e-23	80.1	0.3	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
DUF1610	PF07754.6	gi|332796315|ref|YP_004457815.1|	-	7.2e-19	67.5	15.1	1.2e-11	44.4	3.8	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|332796315|ref|YP_004457815.1|	-	1.7e-08	34.1	13.5	3.6e-05	23.4	0.5	2.5	1	1	1	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|332796315|ref|YP_004457815.1|	-	2.1e-06	26.7	11.7	0.00032	19.7	2.3	3.0	2	1	1	3	3	3	3	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796315|ref|YP_004457815.1|	-	9.6e-06	25.1	5.1	0.00061	19.3	0.8	2.1	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|332796315|ref|YP_004457815.1|	-	0.00013	21.1	11.2	0.011	15.0	4.4	2.8	1	1	0	2	2	2	1	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|332796315|ref|YP_004457815.1|	-	0.00054	19.3	12.0	0.14	11.6	6.1	3.2	2	1	0	2	2	2	1	zinc-ribbon	domain
DUF164	PF02591.10	gi|332796315|ref|YP_004457815.1|	-	0.0019	18.0	6.2	0.53	10.1	0.1	3.1	3	0	0	3	3	3	1	Putative	zinc	ribbon	domain
zf-C2HC5	PF06221.8	gi|332796315|ref|YP_004457815.1|	-	0.0049	16.5	6.9	0.011	15.4	0.7	2.2	1	1	1	2	2	2	1	Putative	zinc	finger	motif,	C2HC5-type
zf-NADH-PPase	PF09297.6	gi|332796315|ref|YP_004457815.1|	-	0.0051	16.2	1.0	0.0051	16.2	0.7	2.3	2	0	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|332796315|ref|YP_004457815.1|	-	0.0055	16.3	5.8	0.015	14.9	1.8	2.5	2	1	1	3	3	3	1	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332796315|ref|YP_004457815.1|	-	0.0057	16.2	5.2	0.024	14.2	1.8	2.5	2	1	1	3	3	3	1	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|332796315|ref|YP_004457815.1|	-	0.0066	16.2	10.1	0.0096	15.7	2.6	2.3	1	1	1	2	2	2	1	Transposase	zinc-ribbon	domain
ADK_lid	PF05191.9	gi|332796315|ref|YP_004457815.1|	-	0.0067	16.0	9.2	2.1	8.0	2.8	3.2	2	1	0	2	2	2	1	Adenylate	kinase,	active	site	lid
DUF35_N	PF12172.3	gi|332796315|ref|YP_004457815.1|	-	0.0069	16.2	10.0	0.026	14.4	2.9	2.9	2	1	1	3	3	3	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
UPF0547	PF10571.4	gi|332796315|ref|YP_004457815.1|	-	0.014	15.0	9.0	0.03	14.0	2.3	2.9	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Sgf11	PF08209.6	gi|332796315|ref|YP_004457815.1|	-	0.014	14.6	8.4	2.8	7.3	0.2	3.1	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-C4_Topoisom	PF01396.14	gi|332796315|ref|YP_004457815.1|	-	0.016	14.6	7.3	0.3	10.6	0.1	3.0	2	1	1	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
IBR	PF01485.16	gi|332796315|ref|YP_004457815.1|	-	0.017	14.9	4.5	0.26	11.2	3.1	2.1	1	1	0	1	1	1	0	IBR	domain
NinF	PF05810.7	gi|332796315|ref|YP_004457815.1|	-	0.018	14.8	0.2	0.018	14.8	0.1	1.4	1	1	0	1	1	1	0	NinF	protein
HypA	PF01155.14	gi|332796315|ref|YP_004457815.1|	-	0.02	14.5	0.5	0.02	14.5	0.4	1.9	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
C1_2	PF03107.11	gi|332796315|ref|YP_004457815.1|	-	0.028	14.5	4.1	7.1	6.8	2.8	2.2	1	1	0	1	1	1	0	C1	domain
Auto_anti-p27	PF06677.7	gi|332796315|ref|YP_004457815.1|	-	0.031	14.0	8.2	1.6	8.5	1.8	2.8	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-CHY	PF05495.7	gi|332796315|ref|YP_004457815.1|	-	0.038	14.1	2.6	0.16	12.1	1.8	1.8	1	1	0	1	1	1	0	CHY	zinc	finger
zf-ISL3	PF14690.1	gi|332796315|ref|YP_004457815.1|	-	0.038	14.0	10.5	1.2	9.2	0.2	3.1	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
PolC_DP2	PF03833.8	gi|332796315|ref|YP_004457815.1|	-	0.039	11.6	1.2	0.042	11.5	0.9	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
Nudix_N_2	PF14803.1	gi|332796315|ref|YP_004457815.1|	-	0.042	13.5	11.9	1.1	9.0	0.0	3.5	4	0	0	4	4	3	0	Nudix	N-terminal
CK_II_beta	PF01214.13	gi|332796315|ref|YP_004457815.1|	-	0.051	13.0	0.6	0.051	13.0	0.4	1.4	1	1	0	1	1	1	0	Casein	kinase	II	regulatory	subunit
Rubredoxin	PF00301.15	gi|332796315|ref|YP_004457815.1|	-	0.056	13.3	6.4	7.5	6.5	0.1	3.1	2	1	0	2	2	2	0	Rubredoxin
zf-HIT	PF04438.11	gi|332796315|ref|YP_004457815.1|	-	0.071	12.7	9.7	0.36	10.5	0.1	3.1	3	1	0	3	3	3	0	HIT	zinc	finger
Spt4	PF06093.8	gi|332796315|ref|YP_004457815.1|	-	0.084	12.7	0.2	0.084	12.7	0.1	1.8	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
Zn-ribbon_8	PF09723.5	gi|332796315|ref|YP_004457815.1|	-	0.089	12.7	10.4	9.3	6.3	0.0	2.9	2	1	0	2	2	2	0	Zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|332796315|ref|YP_004457815.1|	-	0.1	12.6	7.8	0.68	9.9	1.6	2.8	2	1	1	3	3	3	0	zinc-finger
C1_1	PF00130.17	gi|332796315|ref|YP_004457815.1|	-	0.1	12.3	4.0	0.61	9.8	2.7	2.0	1	1	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF2296	PF10058.4	gi|332796315|ref|YP_004457815.1|	-	0.14	11.8	10.6	3.4	7.5	0.6	3.0	2	1	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-LITAF-like	PF10601.4	gi|332796315|ref|YP_004457815.1|	-	0.14	12.0	5.2	3.6	7.5	0.7	2.9	2	1	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
TerY-C	PF15616.1	gi|332796315|ref|YP_004457815.1|	-	0.17	11.7	4.4	0.69	9.8	0.3	2.0	1	1	0	1	1	1	0	TerY-C	metal	binding	domain
Acetone_carb_G	PF08882.6	gi|332796315|ref|YP_004457815.1|	-	0.21	11.6	5.9	2.2	8.3	0.2	2.3	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
PHD	PF00628.24	gi|332796315|ref|YP_004457815.1|	-	0.21	11.2	6.5	9.6	5.9	1.0	2.9	2	1	0	2	2	2	0	PHD-finger
zf-Mss51	PF13824.1	gi|332796315|ref|YP_004457815.1|	-	0.25	11.2	9.8	1.6	8.6	3.5	2.7	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
A2L_zn_ribbon	PF08792.5	gi|332796315|ref|YP_004457815.1|	-	0.26	10.7	10.3	0.44	10.0	0.8	3.3	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-C3HC4_4	PF15227.1	gi|332796315|ref|YP_004457815.1|	-	0.27	11.1	5.2	1.5	8.7	0.4	2.2	2	0	0	2	2	2	0	zinc	finger	of	C3HC4-type,	RING
zf-IS66	PF13005.2	gi|332796315|ref|YP_004457815.1|	-	0.29	11.1	7.3	16	5.5	0.1	3.2	3	0	0	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
Prok-RING_1	PF14446.1	gi|332796315|ref|YP_004457815.1|	-	0.31	10.8	3.5	1.2	8.9	0.3	2.3	2	1	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-H2C2_2	PF13465.1	gi|332796315|ref|YP_004457815.1|	-	0.31	11.4	11.1	2.1	8.7	0.1	3.1	2	1	1	3	3	3	0	Zinc-finger	double	domain
TFIIS_C	PF01096.13	gi|332796315|ref|YP_004457815.1|	-	0.38	10.4	5.9	5.8	6.6	0.1	3.0	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-B_box	PF00643.19	gi|332796315|ref|YP_004457815.1|	-	0.42	10.5	5.7	0.99	9.3	0.6	2.7	2	1	0	2	2	2	0	B-box	zinc	finger
zf-AN1	PF01428.11	gi|332796315|ref|YP_004457815.1|	-	0.66	9.9	7.1	6.4	6.7	0.8	2.8	2	1	1	3	3	3	0	AN1-like	Zinc	finger
DUF1272	PF06906.6	gi|332796315|ref|YP_004457815.1|	-	0.79	9.6	7.4	1.4e+02	2.4	5.1	2.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
C1_3	PF07649.7	gi|332796315|ref|YP_004457815.1|	-	0.8	9.7	10.0	4.3	7.4	1.9	2.5	2	1	0	2	2	2	0	C1-like	domain
RNA_POL_M_15KD	PF02150.11	gi|332796315|ref|YP_004457815.1|	-	0.8	9.4	7.2	21	4.9	3.0	3.0	2	1	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-RING_5	PF14634.1	gi|332796315|ref|YP_004457815.1|	-	0.85	9.3	6.9	2	8.2	0.7	2.2	1	1	1	2	2	2	0	zinc-RING	finger	domain
PhnA_Zn_Ribbon	PF08274.7	gi|332796315|ref|YP_004457815.1|	-	1	9.1	6.6	17	5.3	0.1	3.1	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
DUF1936	PF09151.5	gi|332796315|ref|YP_004457815.1|	-	1.2	8.6	5.6	3.9	7.0	0.2	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1936)
Rpr2	PF04032.11	gi|332796315|ref|YP_004457815.1|	-	1.6	8.6	6.2	80	3.2	4.3	2.8	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
YhfH	PF14149.1	gi|332796315|ref|YP_004457815.1|	-	1.7	8.5	6.4	39	4.1	0.1	3.2	3	0	0	3	3	3	0	YhfH-like	protein
zf-C2H2	PF00096.21	gi|332796315|ref|YP_004457815.1|	-	1.9	8.9	12.1	5.4	7.5	0.7	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
RNHCP	PF12647.2	gi|332796315|ref|YP_004457815.1|	-	2.2	8.1	5.0	1.1	9.0	0.7	2.0	1	1	0	2	2	2	0	RNHCP	domain
NOB1_Zn_bind	PF08772.6	gi|332796315|ref|YP_004457815.1|	-	2.7	7.9	7.1	0.99	9.2	0.7	2.3	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn_ribbon_recom	PF13408.1	gi|332796315|ref|YP_004457815.1|	-	2.7	8.3	8.9	1.1	9.5	2.1	2.2	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
NMD3	PF04981.8	gi|332796315|ref|YP_004457815.1|	-	3.7	6.6	5.5	5.2	6.1	0.0	2.4	1	1	1	2	2	2	0	NMD3	family
zf-C3HC4_3	PF13920.1	gi|332796315|ref|YP_004457815.1|	-	3.8	7.2	7.8	4	7.1	0.5	2.5	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-TFIIB	PF13453.1	gi|332796315|ref|YP_004457815.1|	-	4.3	6.5	13.0	9	5.5	3.6	2.8	1	1	2	3	3	3	0	Transcription	factor	zinc-finger
DUF2072	PF09845.4	gi|332796315|ref|YP_004457815.1|	-	4.9	7.0	6.5	1.1	9.2	0.7	2.0	1	1	1	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
zf-RING_2	PF13639.1	gi|332796315|ref|YP_004457815.1|	-	6.6	6.6	7.8	87	3.0	5.4	2.4	1	1	0	1	1	1	0	Ring	finger	domain
CpXC	PF14353.1	gi|332796315|ref|YP_004457815.1|	-	6.7	6.6	7.9	11	6.0	0.3	2.8	1	1	2	3	3	3	0	CpXC	protein
zf-FPG_IleRS	PF06827.9	gi|332796315|ref|YP_004457815.1|	-	7	6.3	9.8	6.5	6.5	3.1	2.7	2	1	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-CCHC	PF00098.18	gi|332796315|ref|YP_004457815.1|	-	7.2	6.7	10.4	11	6.1	0.5	3.2	3	0	0	3	3	3	0	Zinc	knuckle
DNA_ligase_ZBD	PF03119.11	gi|332796315|ref|YP_004457815.1|	-	7.8	6.3	12.8	2.1	8.1	0.2	3.2	2	1	1	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Ogr_Delta	PF04606.7	gi|332796315|ref|YP_004457815.1|	-	8.6	6.1	8.6	3.7	7.2	0.1	2.9	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
PTH2	PF01981.11	gi|332796316|ref|YP_004457816.1|	-	2.7e-43	146.3	0.2	3e-43	146.1	0.1	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Cyclin_C	PF02984.14	gi|332796316|ref|YP_004457816.1|	-	0.055	13.3	0.1	0.075	12.9	0.0	1.1	1	0	0	1	1	1	0	Cyclin,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|332796316|ref|YP_004457816.1|	-	0.08	12.4	0.1	0.22	11.0	0.1	1.7	1	1	1	2	2	2	0	FAD	binding	domain
tRNA-synt_2	PF00152.15	gi|332796317|ref|YP_004457817.1|	-	7.7e-90	301.0	0.5	1e-89	300.6	0.3	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|332796317|ref|YP_004457817.1|	-	7.1e-16	57.8	0.2	1.3e-15	56.9	0.1	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|332796317|ref|YP_004457817.1|	-	0.046	12.8	0.0	1.2	8.2	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
C9orf72-like	PF15019.1	gi|332796317|ref|YP_004457817.1|	-	0.078	12.2	0.2	0.16	11.1	0.0	1.5	2	0	0	2	2	2	0	C9orf72-like	protein	family
KH_5	PF13184.1	gi|332796318|ref|YP_004457818.1|	-	3e-11	42.9	0.7	5.1e-11	42.2	0.2	1.6	2	0	0	2	2	2	1	NusA-like	KH	domain
SusD-like	PF12741.2	gi|332796318|ref|YP_004457818.1|	-	0.068	11.7	0.1	0.085	11.4	0.1	1.1	1	0	0	1	1	1	0	Susd	and	RagB	outer	membrane	lipoprotein
Ribosomal_L40e	PF01020.12	gi|332796319|ref|YP_004457819.1|	-	2.4e-06	27.0	7.0	3e-06	26.7	4.8	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
zf-ribbon_3	PF13248.1	gi|332796319|ref|YP_004457819.1|	-	0.00096	18.2	0.4	0.0013	17.8	0.3	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
HypA	PF01155.14	gi|332796319|ref|YP_004457819.1|	-	0.0032	17.1	0.6	0.0036	16.9	0.4	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|332796319|ref|YP_004457819.1|	-	0.0046	16.3	0.7	0.0065	15.9	0.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|332796319|ref|YP_004457819.1|	-	0.0079	16.0	0.7	0.0094	15.7	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
DnaJ_CXXCXGXG	PF00684.14	gi|332796319|ref|YP_004457819.1|	-	0.017	15.1	0.7	0.02	14.9	0.5	1.1	1	0	0	1	1	1	0	DnaJ	central	domain
DUF35_N	PF12172.3	gi|332796319|ref|YP_004457819.1|	-	0.11	12.4	3.0	0.31	11.0	2.1	1.7	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Haem_bd	PF14376.1	gi|332796319|ref|YP_004457819.1|	-	0.12	12.1	1.5	0.15	11.7	1.0	1.4	1	1	0	1	1	1	0	Haem-binding	domain
Spt4	PF06093.8	gi|332796319|ref|YP_004457819.1|	-	0.28	11.0	2.5	0.76	9.7	1.6	1.5	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
zf-RanBP	PF00641.13	gi|332796319|ref|YP_004457819.1|	-	0.36	9.9	4.2	0.48	9.5	2.9	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
zf-tcix	PF14952.1	gi|332796319|ref|YP_004457819.1|	-	0.69	9.2	8.1	1.2	8.5	5.6	1.4	1	1	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Cytochrome_C7	PF14522.1	gi|332796319|ref|YP_004457819.1|	-	0.85	9.3	4.2	3.4	7.3	2.9	1.8	1	1	0	1	1	1	0	Cytochrome	c7
zf-C2H2_3	PF13878.1	gi|332796319|ref|YP_004457819.1|	-	1	9.0	4.1	2.7	7.6	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-CCHC	PF00098.18	gi|332796319|ref|YP_004457819.1|	-	1.6	8.8	4.7	4.3	7.4	0.2	2.2	2	0	0	2	2	2	0	Zinc	knuckle
DNA_RNApol_7kD	PF03604.8	gi|332796319|ref|YP_004457819.1|	-	2.5	7.6	11.9	0.16	11.4	4.5	1.9	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Mu-like_Com	PF10122.4	gi|332796319|ref|YP_004457819.1|	-	3.4	6.7	10.1	0.27	10.3	0.4	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
DUF2204	PF09970.4	gi|332796320|ref|YP_004457820.1|	-	1.2e-60	204.0	5.8	1.4e-60	203.9	4.1	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
TPP_enzyme_M	PF00205.17	gi|332796321|ref|YP_004457821.1|	-	1.1e-31	109.3	0.0	5.8e-31	107.0	0.0	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_N	PF02776.13	gi|332796321|ref|YP_004457821.1|	-	6.1e-24	84.4	0.0	9.6e-24	83.7	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PNTB	PF02233.11	gi|332796321|ref|YP_004457821.1|	-	0.037	12.7	0.0	0.068	11.9	0.0	1.3	1	0	0	1	1	1	0	NAD(P)	transhydrogenase	beta	subunit
DrsE	PF02635.10	gi|332796322|ref|YP_004457822.1|	-	1.3e-12	47.8	0.1	1.4e-12	47.7	0.1	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|332796322|ref|YP_004457822.1|	-	1.7e-05	24.6	0.2	1.9e-05	24.4	0.1	1.1	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
SinI	PF08671.5	gi|332796322|ref|YP_004457822.1|	-	0.019	14.3	0.7	2.8	7.4	0.3	2.4	2	0	0	2	2	2	0	Anti-repressor	SinI
Beta-Casp	PF10996.3	gi|332796323|ref|YP_004457823.1|	-	7.4e-32	109.9	0.0	2.5e-31	108.2	0.0	1.9	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|332796323|ref|YP_004457823.1|	-	7.5e-26	90.9	0.4	1.4e-25	90.1	0.3	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332796323|ref|YP_004457823.1|	-	6.7e-13	48.6	0.1	1.5e-12	47.4	0.0	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|332796323|ref|YP_004457823.1|	-	2.5e-12	46.4	0.0	8.8e-12	44.6	0.0	2.1	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|332796323|ref|YP_004457823.1|	-	0.00027	20.6	0.0	0.0009	18.9	0.0	2.0	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.12	gi|332796323|ref|YP_004457823.1|	-	0.0035	16.8	0.9	0.0035	16.8	0.6	3.9	3	1	1	4	4	4	1	KH	domain
DUF2220	PF09983.4	gi|332796323|ref|YP_004457823.1|	-	0.044	12.9	0.0	0.081	12.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	C-term(DUF2220)
KH_4	PF13083.1	gi|332796323|ref|YP_004457823.1|	-	0.54	9.9	4.6	0.33	10.6	0.6	2.5	2	1	0	2	2	2	0	KH	domain
Fe-ADH_2	PF13685.1	gi|332796324|ref|YP_004457824.1|	-	4.7e-64	216.0	0.0	5.8e-64	215.7	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|332796324|ref|YP_004457824.1|	-	2.6e-24	85.5	0.1	5.5e-24	84.4	0.1	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|332796324|ref|YP_004457824.1|	-	2e-09	36.7	0.1	2.9e-08	32.9	0.1	2.5	1	1	0	1	1	1	1	3-dehydroquinate	synthase
FKBP_C	PF00254.23	gi|332796325|ref|YP_004457825.1|	-	1.9e-16	59.8	0.2	5.5e-16	58.3	0.0	1.8	2	1	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
AdoHcyase	PF05221.12	gi|332796326|ref|YP_004457826.1|	-	1.2e-74	250.7	0.5	1.3e-74	250.5	0.3	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|332796326|ref|YP_004457826.1|	-	1.5e-56	190.7	1.8	1.6e-56	190.6	0.6	1.6	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|332796326|ref|YP_004457826.1|	-	2.3e-09	36.6	0.3	6.3e-09	35.2	0.2	1.7	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|332796326|ref|YP_004457826.1|	-	1.4e-06	27.8	0.5	1.4e-06	27.8	0.3	2.1	3	0	0	3	3	3	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
TrkA_N	PF02254.13	gi|332796326|ref|YP_004457826.1|	-	0.00025	21.0	0.6	0.00071	19.5	0.1	2.0	2	0	0	2	2	2	1	TrkA-N	domain
Pyr_redox_2	PF07992.9	gi|332796326|ref|YP_004457826.1|	-	0.0036	17.1	0.8	0.012	15.5	0.7	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
THF_DHG_CYH_C	PF02882.14	gi|332796326|ref|YP_004457826.1|	-	0.0063	15.5	1.9	0.0063	15.5	1.3	2.3	2	1	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
3HCDH_N	PF02737.13	gi|332796326|ref|YP_004457826.1|	-	0.031	13.9	0.8	0.081	12.5	0.6	1.8	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Hydrolase	PF00702.21	gi|332796326|ref|YP_004457826.1|	-	0.032	14.6	0.1	0.12	12.8	0.1	1.9	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
F420_oxidored	PF03807.12	gi|332796326|ref|YP_004457826.1|	-	0.034	14.5	1.0	0.11	12.9	0.1	2.1	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
CPSase_L_chain	PF00289.17	gi|332796326|ref|YP_004457826.1|	-	0.04	14.0	0.9	4.6	7.3	0.0	3.1	3	0	0	3	3	3	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Pyr_redox	PF00070.22	gi|332796326|ref|YP_004457826.1|	-	0.054	13.9	1.0	0.29	11.5	0.7	2.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.15	gi|332796326|ref|YP_004457826.1|	-	0.085	12.9	0.9	0.22	11.6	0.6	1.7	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
DUF3447	PF11929.3	gi|332796326|ref|YP_004457826.1|	-	0.1	12.4	0.0	0.3	10.9	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3447)
AlaDh_PNT_C	PF01262.16	gi|332796326|ref|YP_004457826.1|	-	0.36	10.3	3.7	0.37	10.3	0.3	2.4	2	1	1	3	3	3	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
PX	PF00787.19	gi|332796327|ref|YP_004457827.1|	-	0.056	13.2	0.1	0.082	12.7	0.1	1.3	1	0	0	1	1	1	0	PX	domain
DUF1950	PF09187.5	gi|332796327|ref|YP_004457827.1|	-	0.082	13.0	0.0	0.14	12.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function(DUF1950)
DUF1464	PF07318.7	gi|332796328|ref|YP_004457828.1|	-	1.1e-90	303.8	0.5	6.1e-90	301.4	0.4	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
NTP_transf_2	PF01909.18	gi|332796329|ref|YP_004457829.1|	-	5e-06	26.7	0.3	1.3e-05	25.4	0.2	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
CitG	PF01874.11	gi|332796330|ref|YP_004457830.1|	-	4.8e-40	137.5	0.0	5.5e-40	137.2	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
Metallophos_2	PF12850.2	gi|332796331|ref|YP_004457831.1|	-	0.0024	17.7	0.0	0.0053	16.6	0.0	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Acetyltransf_1	PF00583.19	gi|332796332|ref|YP_004457832.1|	-	7.1e-20	70.8	0.0	9.8e-20	70.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|332796332|ref|YP_004457832.1|	-	7.7e-11	42.1	0.0	1.1e-10	41.6	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|332796332|ref|YP_004457832.1|	-	2.2e-10	40.5	0.0	4.1e-10	39.6	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|332796332|ref|YP_004457832.1|	-	1.9e-09	37.5	0.0	4e-09	36.5	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|332796332|ref|YP_004457832.1|	-	4.1e-09	36.0	0.1	6.1e-09	35.5	0.1	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.1	gi|332796332|ref|YP_004457832.1|	-	1.1e-08	35.1	0.2	2e-08	34.3	0.2	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|332796332|ref|YP_004457832.1|	-	5.3e-08	33.1	0.0	1.2e-07	32.0	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|332796332|ref|YP_004457832.1|	-	5.6e-07	29.4	0.1	2.7e-06	27.2	0.0	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|332796332|ref|YP_004457832.1|	-	0.12	12.2	0.0	0.24	11.3	0.0	1.5	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
DFP	PF04127.10	gi|332796333|ref|YP_004457833.1|	-	3.9e-55	186.3	0.1	7.4e-54	182.1	0.0	2.1	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|332796333|ref|YP_004457833.1|	-	1.9e-28	98.6	1.0	3.3e-28	97.9	0.3	1.7	2	0	0	2	2	2	1	Flavoprotein
ACT_4	PF13291.1	gi|332796333|ref|YP_004457833.1|	-	0.0023	18.2	1.2	0.22	11.9	0.6	2.6	2	0	0	2	2	2	1	ACT	domain
MutS_III	PF05192.13	gi|332796333|ref|YP_004457833.1|	-	0.043	13.6	0.0	0.054	13.2	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	III
SSV1_ORF_D-335	PF07935.6	gi|332796334|ref|YP_004457834.1|	-	5.8e-11	41.9	0.6	6.5e-11	41.8	0.4	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
Glycos_transf_4	PF00953.16	gi|332796335|ref|YP_004457835.1|	-	7.4e-32	110.3	20.0	7.4e-32	110.3	13.9	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	4
polyprenyl_synt	PF00348.12	gi|332796336|ref|YP_004457836.1|	-	3.7e-78	261.9	0.2	4.6e-78	261.6	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
FMN_dh	PF01070.13	gi|332796337|ref|YP_004457837.1|	-	3.1e-23	82.1	0.0	3e-18	65.7	0.0	2.1	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|332796337|ref|YP_004457837.1|	-	8.5e-07	28.1	3.0	0.0022	16.9	0.8	3.2	2	1	1	3	3	3	3	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.12	gi|332796337|ref|YP_004457837.1|	-	0.011	14.6	0.1	0.026	13.4	0.1	1.6	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
AA_kinase	PF00696.23	gi|332796338|ref|YP_004457838.1|	-	2.1e-28	99.4	0.0	2.9e-28	99.0	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
Memo	PF01875.12	gi|332796340|ref|YP_004457840.1|	-	3e-88	295.2	0.1	3.4e-88	295.0	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
Lipase_GDSL_3	PF14606.1	gi|332796340|ref|YP_004457840.1|	-	0.027	14.2	0.0	0.042	13.5	0.0	1.3	1	0	0	1	1	1	0	GDSL-like	Lipase/Acylhydrolase	family
Glyco_trans_4_2	PF13477.1	gi|332796340|ref|YP_004457840.1|	-	0.041	13.7	0.5	2.5	7.9	0.1	2.5	2	1	0	2	2	2	0	Glycosyl	transferase	4-like
LigB	PF02900.13	gi|332796340|ref|YP_004457840.1|	-	0.047	12.6	0.0	0.13	11.1	0.0	1.6	1	1	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Ribosomal_S2	PF00318.15	gi|332796341|ref|YP_004457841.1|	-	4.8e-40	137.0	0.0	1.7e-36	125.4	0.0	2.1	1	1	0	1	1	1	1	Ribosomal	protein	S2
Peripla_BP_4	PF13407.1	gi|332796341|ref|YP_004457841.1|	-	0.027	13.8	0.2	0.038	13.3	0.1	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
RNA_pol_N	PF01194.12	gi|332796342|ref|YP_004457842.1|	-	7.1e-32	109.2	0.5	7.9e-32	109.0	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|332796342|ref|YP_004457842.1|	-	0.035	14.2	0.2	0.054	13.5	0.2	1.4	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S9	PF00380.14	gi|332796343|ref|YP_004457843.1|	-	1.2e-28	99.8	0.1	1.3e-28	99.6	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
TPR_7	PF13176.1	gi|332796343|ref|YP_004457843.1|	-	0.13	12.1	0.3	0.35	10.7	0.1	1.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Ribosomal_L13	PF00572.13	gi|332796344|ref|YP_004457844.1|	-	1.8e-28	99.1	0.2	2.6e-28	98.6	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L13
IF2_N	PF04760.10	gi|332796344|ref|YP_004457844.1|	-	0.1	12.2	0.1	0.31	10.7	0.0	1.8	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF384	PF04064.8	gi|332796344|ref|YP_004457844.1|	-	0.14	11.7	0.0	0.64	9.6	0.0	2.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF384)
Ribosomal_L18e	PF00828.14	gi|332796345|ref|YP_004457845.1|	-	1.9e-15	57.3	0.4	2.3e-15	57.1	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
RNA_pol_A_bac	PF01000.21	gi|332796346|ref|YP_004457846.1|	-	3.1e-29	101.3	0.0	5.8e-29	100.5	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|332796346|ref|YP_004457846.1|	-	2.8e-11	42.3	0.0	3.5e-11	42.0	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_9	PF13187.1	gi|332796346|ref|YP_004457846.1|	-	0.0012	19.0	8.7	0.019	15.2	3.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
DUF1450	PF07293.6	gi|332796346|ref|YP_004457846.1|	-	0.013	15.4	8.2	0.034	14.1	1.6	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1450)
Fer4_10	PF13237.1	gi|332796346|ref|YP_004457846.1|	-	0.39	10.5	10.6	0.2	11.4	0.7	2.9	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332796346|ref|YP_004457846.1|	-	0.4	11.0	10.2	23	5.4	1.7	2.7	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332796346|ref|YP_004457846.1|	-	0.58	10.9	7.4	13	6.5	0.2	3.2	3	0	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|332796346|ref|YP_004457846.1|	-	2.6	8.1	9.6	6.5	6.8	0.9	2.7	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Ribosomal_S11	PF00411.14	gi|332796347|ref|YP_004457847.1|	-	5.1e-43	145.7	0.2	5.9e-43	145.5	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
Inositol_P	PF00459.20	gi|332796347|ref|YP_004457847.1|	-	0.11	11.7	0.2	0.13	11.5	0.1	1.1	1	0	0	1	1	1	0	Inositol	monophosphatase	family
S4	PF01479.20	gi|332796348|ref|YP_004457848.1|	-	9.4e-17	60.1	0.3	2.1e-16	59.0	0.1	1.7	2	0	0	2	2	2	1	S4	domain
Ribosomal_S4	PF00163.14	gi|332796348|ref|YP_004457848.1|	-	0.0005	20.3	1.5	0.00094	19.5	0.3	1.9	1	1	1	2	2	2	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S13	PF00416.17	gi|332796349|ref|YP_004457849.1|	-	4.2e-36	123.6	0.2	5.3e-36	123.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
HHH_4	PF14490.1	gi|332796349|ref|YP_004457849.1|	-	0.0003	20.4	0.0	0.0005	19.7	0.0	1.4	1	0	0	1	1	1	1	Helix-hairpin-helix	containing	domain
FbpA	PF05833.6	gi|332796349|ref|YP_004457849.1|	-	0.0014	17.2	0.0	0.0016	17.0	0.0	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HHH_5	PF14520.1	gi|332796349|ref|YP_004457849.1|	-	0.11	12.6	0.0	0.42	10.8	0.0	1.9	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
AIRS_C	PF02769.17	gi|332796350|ref|YP_004457850.1|	-	7.3e-10	39.0	0.0	1.3e-09	38.2	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|332796350|ref|YP_004457850.1|	-	3.8e-08	33.4	0.0	7.8e-08	32.4	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
UPF0047	PF01894.12	gi|332796351|ref|YP_004457851.1|	-	6.6e-38	129.1	0.0	7.7e-38	128.9	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
tRNA-synt_1b	PF00579.20	gi|332796353|ref|YP_004457853.1|	-	5.1e-51	173.5	1.6	2.9e-48	164.5	1.1	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Toprim_4	PF13662.1	gi|332796354|ref|YP_004457854.1|	-	1.5e-09	37.6	0.1	6.2e-09	35.7	0.0	2.0	2	0	0	2	2	2	1	Toprim	domain
Toprim	PF01751.17	gi|332796354|ref|YP_004457854.1|	-	0.00011	22.1	0.8	0.00094	19.1	0.0	2.6	2	1	0	2	2	2	1	Toprim	domain
Sec3_C_2	PF15278.1	gi|332796354|ref|YP_004457854.1|	-	0.013	15.6	0.0	3.6	7.7	0.0	3.0	3	0	0	3	3	3	0	Sec3	exocyst	complex	subunit
Mtc	PF03820.12	gi|332796354|ref|YP_004457854.1|	-	0.071	11.7	0.0	0.12	11.0	0.0	1.2	1	0	0	1	1	1	0	Tricarboxylate	carrier
DNA_pol_B	PF00136.16	gi|332796355|ref|YP_004457855.1|	-	1.3e-95	320.9	0.1	2.2e-95	320.1	0.1	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|332796355|ref|YP_004457855.1|	-	3e-46	157.7	3.8	8.5e-45	153.0	2.7	2.3	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|332796355|ref|YP_004457855.1|	-	2.9e-12	46.7	0.0	6e-12	45.6	0.0	1.6	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|332796355|ref|YP_004457855.1|	-	6.3e-07	29.1	0.1	1.1e-06	28.2	0.1	1.3	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DNA_pol_B_2	PF03175.8	gi|332796355|ref|YP_004457855.1|	-	2.1e-05	23.3	0.1	2.1e-05	23.3	0.1	1.6	2	0	0	2	2	2	1	DNA	polymerase	type	B,	organellar	and	viral
Acetyltransf_1	PF00583.19	gi|332796356|ref|YP_004457856.1|	-	2.2e-13	50.0	1.0	2.9e-13	49.6	0.1	1.6	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|332796356|ref|YP_004457856.1|	-	4.4e-10	39.5	0.7	7.7e-10	38.7	0.5	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|332796356|ref|YP_004457856.1|	-	1.1e-08	35.1	0.0	1.9e-08	34.4	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|332796356|ref|YP_004457856.1|	-	2.6e-07	30.7	1.8	1.3e-06	28.4	1.2	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|332796356|ref|YP_004457856.1|	-	0.00019	21.3	0.0	0.00038	20.3	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|332796356|ref|YP_004457856.1|	-	0.0011	18.6	0.0	0.0017	18.0	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
DUF3749	PF12568.3	gi|332796356|ref|YP_004457856.1|	-	0.0036	16.8	0.0	0.0046	16.5	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltr_2	PF13718.1	gi|332796356|ref|YP_004457856.1|	-	0.0087	15.4	0.1	0.17	11.1	0.0	2.0	1	1	1	2	2	2	1	GNAT	acetyltransferase	2
Acetyltransf_8	PF13523.1	gi|332796356|ref|YP_004457856.1|	-	0.023	14.5	0.2	0.068	13.0	0.0	1.9	2	1	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
eRF1_1	PF03463.10	gi|332796357|ref|YP_004457857.1|	-	1.7e-26	92.3	2.0	3.3e-26	91.4	1.4	1.5	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|332796357|ref|YP_004457857.1|	-	8.6e-22	77.5	1.1	2.8e-21	75.8	0.1	2.4	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|332796357|ref|YP_004457857.1|	-	5.4e-15	55.8	0.1	1.1e-14	54.8	0.1	1.6	1	0	0	1	1	1	1	eRF1	domain	2
Arg_tRNA_synt_N	PF03485.11	gi|332796357|ref|YP_004457857.1|	-	0.058	13.9	0.1	0.16	12.5	0.0	1.7	1	0	0	1	1	1	0	Arginyl	tRNA	synthetase	N	terminal	domain
Radical_SAM	PF04055.16	gi|332796358|ref|YP_004457858.1|	-	7.2e-09	36.0	1.0	4.3e-07	30.2	0.0	3.5	2	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|332796358|ref|YP_004457858.1|	-	3.6e-08	33.4	0.0	7.7e-08	32.3	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|332796358|ref|YP_004457858.1|	-	5.6e-06	26.5	0.2	1.5e-05	25.1	0.1	1.8	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
DUF1122	PF06557.6	gi|332796359|ref|YP_004457859.1|	-	1.2e-61	206.8	1.9	1.4e-61	206.6	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1122)
Toprim_Crpt	PF13342.1	gi|332796359|ref|YP_004457859.1|	-	0.06	12.9	1.6	0.63	9.7	0.1	2.4	2	0	0	2	2	2	0	C-terminal	repeat	of	topoisomerase
NTP_transf_2	PF01909.18	gi|332796360|ref|YP_004457860.1|	-	2.9e-09	37.1	1.3	4.3e-09	36.5	0.9	1.7	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Peptidase_M50	PF02163.17	gi|332796361|ref|YP_004457861.1|	-	1.5e-24	86.0	2.9	1.5e-24	86.0	2.0	2.1	2	2	0	2	2	2	1	Peptidase	family	M50
PDZ	PF00595.19	gi|332796361|ref|YP_004457861.1|	-	5e-07	29.7	0.0	1.1e-06	28.7	0.0	1.5	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
PDZ_2	PF13180.1	gi|332796361|ref|YP_004457861.1|	-	7.7e-06	25.7	0.0	1.8e-05	24.5	0.0	1.6	2	0	0	2	2	2	1	PDZ	domain
Tricorn_PDZ	PF14685.1	gi|332796361|ref|YP_004457861.1|	-	0.016	14.9	0.0	0.032	14.0	0.0	1.4	1	0	0	1	1	1	0	Tricorn	protease	PDZ	domain
tRNA-synt_2	PF00152.15	gi|332796362|ref|YP_004457862.1|	-	3.8e-98	328.3	0.5	4.7e-98	328.0	0.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|332796362|ref|YP_004457862.1|	-	2.4e-12	46.5	0.2	1.3e-11	44.1	0.1	2.2	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|332796362|ref|YP_004457862.1|	-	3.4e-10	39.5	0.7	5e-07	29.1	0.1	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
SAP	PF02037.22	gi|332796362|ref|YP_004457862.1|	-	0.0068	15.8	0.1	0.035	13.6	0.0	2.4	2	0	0	2	2	2	1	SAP	domain
LEM	PF03020.10	gi|332796362|ref|YP_004457862.1|	-	0.0087	15.4	0.0	0.039	13.3	0.0	2.2	1	0	0	1	1	1	1	LEM	domain
tRNA-synt_2b	PF00587.20	gi|332796362|ref|YP_004457862.1|	-	0.03	13.8	0.1	7	6.1	0.0	2.4	2	0	0	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF2624	PF11116.3	gi|332796362|ref|YP_004457862.1|	-	0.26	11.8	2.4	56	4.3	0.0	3.9	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2624)
IF2_N	PF04760.10	gi|332796363|ref|YP_004457863.1|	-	0.024	14.2	2.2	4.6	6.9	0.0	3.1	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF556	PF04476.8	gi|332796363|ref|YP_004457863.1|	-	0.075	12.2	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF556)
UDPG_MGDP_dh_N	PF03721.9	gi|332796363|ref|YP_004457863.1|	-	0.12	11.7	0.4	0.14	11.5	0.3	1.2	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
DUF131	PF01998.12	gi|332796364|ref|YP_004457864.1|	-	2e-08	33.4	10.8	2.1e-08	33.4	6.8	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF131
MFS_2	PF13347.1	gi|332796364|ref|YP_004457864.1|	-	0.008	14.6	1.3	0.008	14.6	0.9	1.7	1	1	0	1	1	1	1	MFS/sugar	transport	protein
DUF2207	PF09972.4	gi|332796364|ref|YP_004457864.1|	-	0.42	9.1	9.1	0.65	8.5	6.3	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
PHO4	PF01384.15	gi|332796364|ref|YP_004457864.1|	-	1.1	7.8	8.5	1.1	7.8	5.9	1.0	1	0	0	1	1	1	0	Phosphate	transporter	family
Virul_fac_BrkB	PF03631.10	gi|332796364|ref|YP_004457864.1|	-	1.6	8.0	8.7	1.9	7.7	6.1	1.1	1	0	0	1	1	1	0	Virulence	factor	BrkB
DUF4199	PF13858.1	gi|332796364|ref|YP_004457864.1|	-	1.7	8.5	9.9	0.38	10.6	1.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
DUF3671	PF12420.3	gi|332796364|ref|YP_004457864.1|	-	1.8	8.5	7.3	3	7.8	5.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF202	PF02656.10	gi|332796364|ref|YP_004457864.1|	-	2.1	8.6	12.3	28	5.0	8.5	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
SUR7	PF06687.7	gi|332796364|ref|YP_004457864.1|	-	2.1	7.8	8.7	3.1	7.3	6.0	1.2	1	0	0	1	1	1	0	SUR7/PalI	family
Na_sulph_symp	PF00939.14	gi|332796364|ref|YP_004457864.1|	-	2.3	6.9	11.1	1.1	8.0	1.6	2.0	1	1	1	2	2	2	0	Sodium:sulfate	symporter	transmembrane	region
DUF2606	PF10794.4	gi|332796365|ref|YP_004457865.1|	-	0.19	11.1	1.8	0.62	9.4	0.0	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2606)
TFIIB	PF00382.14	gi|332796366|ref|YP_004457866.1|	-	1.7e-36	123.8	4.7	2.3e-18	65.7	0.3	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|332796366|ref|YP_004457866.1|	-	6.6e-16	57.3	0.3	1.2e-15	56.5	0.2	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
HTH_AsnC-type	PF13404.1	gi|332796366|ref|YP_004457866.1|	-	4e-07	29.4	0.1	1.3e-05	24.6	0.0	2.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|332796366|ref|YP_004457866.1|	-	8.5e-06	24.9	2.9	0.00017	20.7	0.2	3.5	4	1	0	4	4	4	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|332796366|ref|YP_004457866.1|	-	9.3e-05	21.7	2.0	0.0002	20.6	0.1	2.6	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
Cyclin_C	PF02984.14	gi|332796366|ref|YP_004457866.1|	-	0.00011	22.0	0.2	0.19	11.6	0.0	2.2	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
Sigma70_r4_2	PF08281.7	gi|332796366|ref|YP_004457866.1|	-	0.00053	19.3	0.1	0.0081	15.6	0.0	2.7	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_11	PF08279.7	gi|332796366|ref|YP_004457866.1|	-	0.0049	16.4	0.3	0.015	14.9	0.2	1.8	1	0	0	1	1	1	1	HTH	domain
DUF3562	PF12085.3	gi|332796366|ref|YP_004457866.1|	-	0.0051	16.6	0.5	0.81	9.5	0.0	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3562)
Cyclin_N	PF00134.18	gi|332796366|ref|YP_004457866.1|	-	0.0072	15.8	0.1	4.1	6.9	0.0	2.2	2	0	0	2	2	2	2	Cyclin,	N-terminal	domain
HTH_37	PF13744.1	gi|332796366|ref|YP_004457866.1|	-	0.012	15.3	0.2	0.1	12.3	0.2	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|332796366|ref|YP_004457866.1|	-	0.013	14.7	0.4	0.89	8.7	0.1	2.8	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_23	PF13384.1	gi|332796366|ref|YP_004457866.1|	-	0.019	14.5	0.1	0.019	14.5	0.1	3.3	3	0	0	3	3	3	0	Homeodomain-like	domain
HTH_Crp_2	PF13545.1	gi|332796366|ref|YP_004457866.1|	-	0.046	13.5	5.2	0.48	10.2	0.1	3.5	4	0	0	4	4	4	0	Crp-like	helix-turn-helix	domain
SUI1	PF01253.17	gi|332796367|ref|YP_004457867.1|	-	1.6e-26	91.9	1.5	1.8e-26	91.7	1.1	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|332796367|ref|YP_004457867.1|	-	0.002	18.3	0.5	0.0031	17.7	0.4	1.5	1	1	0	1	1	1	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
PG_binding_2	PF08823.6	gi|332796367|ref|YP_004457867.1|	-	0.13	12.3	0.0	0.33	11.0	0.0	1.7	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
DNA_RNApol_7kD	PF03604.8	gi|332796368|ref|YP_004457868.1|	-	1.1e-05	24.8	3.0	2.2e-05	23.8	2.1	1.5	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2072	PF09845.4	gi|332796368|ref|YP_004457868.1|	-	0.00077	19.3	0.3	0.00077	19.3	0.2	1.0	1	0	0	1	1	1	1	Zn-ribbon	containing	protein	(DUF2072)
Zn_Tnp_IS1595	PF12760.2	gi|332796368|ref|YP_004457868.1|	-	0.015	15.0	3.3	0.089	12.6	0.0	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|332796368|ref|YP_004457868.1|	-	0.027	14.8	3.7	1.3	9.5	0.3	2.1	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-ribbon_3	PF13248.1	gi|332796368|ref|YP_004457868.1|	-	0.072	12.3	0.3	0.072	12.3	0.2	1.9	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332796368|ref|YP_004457868.1|	-	0.09	12.2	0.1	0.09	12.2	0.0	1.9	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|332796368|ref|YP_004457868.1|	-	0.11	12.8	2.4	1.5	9.1	0.1	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
C1_1	PF00130.17	gi|332796368|ref|YP_004457868.1|	-	0.13	12.0	0.4	0.16	11.7	0.3	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zinc_ribbon_5	PF13719.1	gi|332796368|ref|YP_004457868.1|	-	0.13	11.8	4.2	13	5.4	3.3	2.4	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|332796368|ref|YP_004457868.1|	-	0.17	11.9	3.2	0.2	11.6	0.1	2.0	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-Di19	PF05605.7	gi|332796368|ref|YP_004457868.1|	-	0.2	11.8	1.3	3.7	7.7	0.2	2.0	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
Zn-ribbon_8	PF09723.5	gi|332796368|ref|YP_004457868.1|	-	0.25	11.3	2.9	1.1	9.2	2.0	1.9	1	1	1	2	2	2	0	Zinc	ribbon	domain
Cys_rich_CPXG	PF14255.1	gi|332796368|ref|YP_004457868.1|	-	0.26	11.1	1.7	0.39	10.5	0.3	1.8	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
Rubredoxin	PF00301.15	gi|332796368|ref|YP_004457868.1|	-	0.28	11.0	6.4	8.4	6.3	4.3	2.1	1	1	1	2	2	2	0	Rubredoxin
zinc_ribbon_4	PF13717.1	gi|332796368|ref|YP_004457868.1|	-	0.3	10.8	4.5	8.2	6.2	3.2	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-BED	PF02892.10	gi|332796368|ref|YP_004457868.1|	-	0.96	9.2	4.2	0.41	10.4	1.0	1.8	1	1	1	2	2	2	0	BED	zinc	finger
Mu-like_Com	PF10122.4	gi|332796368|ref|YP_004457868.1|	-	2.9	7.0	4.5	9.1	5.4	3.1	1.8	1	1	0	1	1	1	0	Mu-like	prophage	protein	Com
Arginase	PF00491.16	gi|332796369|ref|YP_004457869.1|	-	3.1e-72	243.1	0.0	3.7e-72	242.9	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
tRNA-synt_2b	PF00587.20	gi|332796370|ref|YP_004457870.1|	-	8.4e-53	178.4	0.1	1.7e-52	177.5	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|332796370|ref|YP_004457870.1|	-	1.2e-20	73.2	0.2	1.2e-20	73.2	0.1	2.9	3	1	0	3	3	3	1	Anticodon	binding	domain
Rad50_zn_hook	PF04423.9	gi|332796370|ref|YP_004457870.1|	-	0.032	13.6	3.2	0.056	12.9	0.0	3.1	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
Arc_PepC	PF06819.6	gi|332796370|ref|YP_004457870.1|	-	0.082	12.8	3.1	9.1	6.2	0.7	2.7	2	0	0	2	2	2	0	Archaeal	Peptidase	A24	C-terminal	Domain
Zn-ribbon_8	PF09723.5	gi|332796370|ref|YP_004457870.1|	-	0.1	12.5	0.1	6.4	6.8	0.0	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
DsrD	PF08679.6	gi|332796370|ref|YP_004457870.1|	-	0.45	10.5	5.7	1.3	9.0	4.0	1.8	1	0	0	1	1	1	0	Dissimilatory	sulfite	reductase	D	(DsrD)
Molydop_binding	PF01568.16	gi|332796371|ref|YP_004457871.1|	-	0.027	14.3	0.1	2.1	8.1	0.0	2.2	1	1	1	2	2	2	0	Molydopterin	dinucleotide	binding	domain
Imm32	PF15579.1	gi|332796371|ref|YP_004457871.1|	-	0.13	11.8	0.1	0.15	11.6	0.1	1.3	1	0	0	1	1	1	0	Immunity	protein	32
XhlA	PF10779.4	gi|332796372|ref|YP_004457872.1|	-	1.5	8.7	5.9	3.6	7.5	0.1	2.3	2	1	0	2	2	2	0	Haemolysin	XhlA
PhoU_div	PF01865.11	gi|332796373|ref|YP_004457873.1|	-	1.9e-07	30.4	11.5	3.5e-07	29.5	5.4	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|332796373|ref|YP_004457873.1|	-	4.3e-05	23.8	11.1	0.00065	20.0	2.6	2.5	2	1	0	2	2	2	2	PhoU	domain
ALIX_LYPXL_bnd	PF13949.1	gi|332796373|ref|YP_004457873.1|	-	0.045	12.7	0.2	0.094	11.6	0.0	1.6	2	0	0	2	2	2	0	ALIX	V-shaped	domain	binding	to	HIV
DUF1319	PF07028.6	gi|332796373|ref|YP_004457873.1|	-	0.049	13.8	1.3	0.13	12.4	0.9	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
THOC7	PF05615.8	gi|332796373|ref|YP_004457873.1|	-	0.14	12.4	1.4	2.3	8.4	0.2	2.3	2	0	0	2	2	2	0	Tho	complex	subunit	7
tRNA_int_endo	PF01974.12	gi|332796374|ref|YP_004457874.1|	-	1.4e-25	88.9	0.0	2.1e-25	88.2	0.0	1.3	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|332796374|ref|YP_004457874.1|	-	1.9e-20	72.1	0.2	4.3e-20	71.0	0.2	1.5	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
cNMP_binding	PF00027.24	gi|332796374|ref|YP_004457874.1|	-	0.031	14.0	0.0	0.059	13.1	0.0	1.4	1	0	0	1	1	1	0	Cyclic	nucleotide-binding	domain
Fer4_18	PF13746.1	gi|332796375|ref|YP_004457875.1|	-	0.11	12.9	4.8	0.84	10.1	3.3	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DUF2083	PF09856.4	gi|332796375|ref|YP_004457875.1|	-	0.24	11.0	2.9	0.99	9.0	0.0	2.1	1	1	1	2	2	2	0	Predicted	transcriptional	regulator	(DUF2083)
Flavoprotein	PF02441.14	gi|332796376|ref|YP_004457876.1|	-	1.4e-26	92.7	0.1	2e-26	92.1	0.0	1.2	1	0	0	1	1	1	1	Flavoprotein
Thi4	PF01946.12	gi|332796377|ref|YP_004457877.1|	-	4.1e-87	291.0	1.0	4.8e-87	290.8	0.7	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|332796377|ref|YP_004457877.1|	-	6.3e-16	58.2	2.0	8.2e-09	34.8	0.6	2.1	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|332796377|ref|YP_004457877.1|	-	2.1e-11	43.5	0.7	2.7e-11	43.1	0.5	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|332796377|ref|YP_004457877.1|	-	1.1e-10	40.9	3.4	8.2e-07	28.2	0.4	3.0	3	0	0	3	3	3	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|332796377|ref|YP_004457877.1|	-	5.3e-10	39.1	0.5	1.2e-09	37.9	0.2	1.7	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|332796377|ref|YP_004457877.1|	-	1.6e-07	31.5	0.3	5.7e-07	29.8	0.2	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332796377|ref|YP_004457877.1|	-	4.8e-07	28.6	0.2	7.3e-07	27.9	0.1	1.3	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332796377|ref|YP_004457877.1|	-	1.3e-06	27.7	0.0	2.1e-06	27.0	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|332796377|ref|YP_004457877.1|	-	1.7e-06	28.0	2.0	2.6e-06	27.4	1.4	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332796377|ref|YP_004457877.1|	-	2.6e-05	23.2	0.8	4.8e-05	22.3	0.6	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|332796377|ref|YP_004457877.1|	-	0.00028	21.2	0.6	0.001	19.4	0.4	2.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|332796377|ref|YP_004457877.1|	-	0.0046	15.9	0.1	0.019	13.8	0.1	2.0	1	1	0	1	1	1	1	Lycopene	cyclase	protein
ThiF	PF00899.16	gi|332796377|ref|YP_004457877.1|	-	0.0047	16.7	0.2	0.014	15.1	0.0	1.9	2	0	0	2	2	2	1	ThiF	family
Amino_oxidase	PF01593.19	gi|332796377|ref|YP_004457877.1|	-	0.0084	15.2	0.2	0.013	14.5	0.2	1.3	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
Shikimate_DH	PF01488.15	gi|332796377|ref|YP_004457877.1|	-	0.0099	15.9	0.0	0.026	14.6	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Trp_halogenase	PF04820.9	gi|332796377|ref|YP_004457877.1|	-	0.011	14.4	2.3	0.059	12.0	0.6	2.1	2	1	0	2	2	2	0	Tryptophan	halogenase
GMC_oxred_N	PF00732.14	gi|332796377|ref|YP_004457877.1|	-	0.061	12.4	0.1	0.17	11.0	0.0	1.6	2	0	0	2	2	2	0	GMC	oxidoreductase
NAD_binding_9	PF13454.1	gi|332796377|ref|YP_004457877.1|	-	0.07	12.8	0.9	0.15	11.8	0.1	1.8	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Ribosomal_S24e	PF01282.14	gi|332796378|ref|YP_004457878.1|	-	1.3e-20	72.9	0.3	1.9e-20	72.4	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
Ribosomal_S27	PF01599.14	gi|332796379|ref|YP_004457879.1|	-	5.2e-11	42.1	1.9	7.3e-11	41.7	1.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|332796379|ref|YP_004457879.1|	-	7.7e-05	22.4	3.5	8.7e-05	22.2	2.4	1.3	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796379|ref|YP_004457879.1|	-	0.00095	18.7	1.6	0.0014	18.2	1.1	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|332796379|ref|YP_004457879.1|	-	0.0028	16.8	1.4	0.18	11.0	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|332796379|ref|YP_004457879.1|	-	0.0058	16.2	0.2	0.015	15.0	0.1	1.7	1	1	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
GFA	PF04828.9	gi|332796379|ref|YP_004457879.1|	-	0.0058	16.5	1.5	0.91	9.5	0.1	2.1	1	1	1	2	2	2	2	Glutathione-dependent	formaldehyde-activating	enzyme
DZR	PF12773.2	gi|332796379|ref|YP_004457879.1|	-	0.015	15.1	1.2	0.025	14.3	0.8	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2082	PF09855.4	gi|332796379|ref|YP_004457879.1|	-	0.021	14.6	2.8	0.2	11.5	0.2	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Zn-ribbon_8	PF09723.5	gi|332796379|ref|YP_004457879.1|	-	0.03	14.2	0.8	0.99	9.4	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Ribosomal_L37e	PF01907.14	gi|332796379|ref|YP_004457879.1|	-	0.035	13.9	1.1	0.056	13.2	0.8	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L37e
IBR	PF01485.16	gi|332796379|ref|YP_004457879.1|	-	0.035	13.9	0.5	0.039	13.8	0.3	1.1	1	0	0	1	1	1	0	IBR	domain
YhfH	PF14149.1	gi|332796379|ref|YP_004457879.1|	-	0.038	13.7	3.3	0.058	13.2	0.2	2.1	2	0	0	2	2	2	0	YhfH-like	protein
DUF2387	PF09526.5	gi|332796379|ref|YP_004457879.1|	-	0.041	13.8	0.5	0.072	13.0	0.4	1.4	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
FAM72	PF14976.1	gi|332796379|ref|YP_004457879.1|	-	0.052	13.3	0.9	0.073	12.9	0.6	1.3	1	1	0	1	1	1	0	FAM72	protein
zf-piccolo	PF05715.8	gi|332796379|ref|YP_004457879.1|	-	0.06	13.3	0.4	0.076	13.0	0.3	1.1	1	0	0	1	1	1	0	Piccolo	Zn-finger
zinc_ribbon_2	PF13240.1	gi|332796379|ref|YP_004457879.1|	-	0.065	12.7	3.0	0.8	9.2	0.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|332796379|ref|YP_004457879.1|	-	0.12	12.0	0.2	0.12	12.0	0.2	1.6	2	0	0	2	2	1	0	Zinc	finger	found	in	FPG	and	IleRS
UPF0547	PF10571.4	gi|332796379|ref|YP_004457879.1|	-	0.12	12.0	0.5	0.12	12.0	0.3	2.0	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
Nudix_N_2	PF14803.1	gi|332796379|ref|YP_004457879.1|	-	0.13	12.0	2.4	0.43	10.3	1.6	1.8	1	1	0	1	1	1	0	Nudix	N-terminal
zf-NADH-PPase	PF09297.6	gi|332796379|ref|YP_004457879.1|	-	0.13	11.8	4.0	0.84	9.2	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|332796379|ref|YP_004457879.1|	-	0.13	12.3	5.8	0.4	10.7	0.4	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TFIIS_C	PF01096.13	gi|332796379|ref|YP_004457879.1|	-	0.15	11.6	2.1	3.9	7.1	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
TF_Zn_Ribbon	PF08271.7	gi|332796379|ref|YP_004457879.1|	-	0.16	11.3	2.0	1.4	8.3	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
Auto_anti-p27	PF06677.7	gi|332796379|ref|YP_004457879.1|	-	0.17	11.6	1.9	0.47	10.2	0.2	2.0	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-tcix	PF14952.1	gi|332796379|ref|YP_004457879.1|	-	0.24	10.7	0.5	0.24	10.7	0.3	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zinc_ribbon_5	PF13719.1	gi|332796379|ref|YP_004457879.1|	-	0.24	11.0	3.4	2.7	7.6	0.6	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|332796379|ref|YP_004457879.1|	-	0.24	10.8	1.3	5.6	6.5	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-C2H2_4	PF13894.1	gi|332796379|ref|YP_004457879.1|	-	0.32	11.4	1.7	17	5.9	0.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Rubredoxin	PF00301.15	gi|332796379|ref|YP_004457879.1|	-	0.35	10.7	2.6	7.6	6.5	0.2	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-TFIIB	PF13453.1	gi|332796379|ref|YP_004457879.1|	-	0.36	10.0	2.8	0.77	8.9	1.9	1.6	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zf-RanBP	PF00641.13	gi|332796379|ref|YP_004457879.1|	-	0.37	9.9	3.0	6.6	5.9	0.2	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
zinc_ribbon_4	PF13717.1	gi|332796379|ref|YP_004457879.1|	-	0.61	9.8	4.2	3.2	7.5	0.6	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
FeS	PF04060.8	gi|332796379|ref|YP_004457879.1|	-	2.7	7.6	4.9	1.3	8.6	0.4	2.3	2	0	0	2	2	2	0	Putative	Fe-S	cluster
Zn_ribbon_recom	PF13408.1	gi|332796379|ref|YP_004457879.1|	-	4.7	7.5	6.1	64	3.9	4.4	2.1	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-IS66	PF13005.2	gi|332796379|ref|YP_004457879.1|	-	6.1	6.9	6.5	2.7	8.0	0.3	2.2	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Peptidase_M22	PF00814.20	gi|332796380|ref|YP_004457880.1|	-	7.2e-74	248.6	0.0	8.2e-74	248.4	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
CheX	PF13690.1	gi|332796380|ref|YP_004457880.1|	-	0.096	12.5	0.0	0.36	10.7	0.0	1.9	1	1	1	2	2	2	0	Chemotaxis	phosphatase	CheX
Pkinase	PF00069.20	gi|332796381|ref|YP_004457881.1|	-	1.3e-10	40.9	0.5	1.6e-10	40.5	0.4	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
RIO1	PF01163.17	gi|332796381|ref|YP_004457881.1|	-	1.1e-09	37.9	0.7	1.6e-09	37.4	0.1	1.6	1	1	1	2	2	2	1	RIO1	family
Pkinase_Tyr	PF07714.12	gi|332796381|ref|YP_004457881.1|	-	3.2e-07	29.6	0.2	3.3e-07	29.6	0.1	1.1	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.18	gi|332796381|ref|YP_004457881.1|	-	1.1e-06	28.6	0.0	4.4e-05	23.3	0.0	2.2	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|332796381|ref|YP_004457881.1|	-	1.7e-06	27.2	0.1	4.3e-06	25.9	0.1	1.6	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
WaaY	PF06176.6	gi|332796381|ref|YP_004457881.1|	-	0.00093	18.4	0.5	0.0013	18.0	0.3	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
EcKinase	PF02958.15	gi|332796381|ref|YP_004457881.1|	-	0.0015	17.7	0.0	0.0024	17.0	0.0	1.3	1	0	0	1	1	1	1	Ecdysteroid	kinase
Choline_kinase	PF01633.15	gi|332796381|ref|YP_004457881.1|	-	0.0024	17.5	0.1	0.0039	16.7	0.1	1.5	1	1	0	1	1	1	1	Choline/ethanolamine	kinase
YrbL-PhoP_reg	PF10707.4	gi|332796381|ref|YP_004457881.1|	-	0.094	12.0	0.2	0.24	10.7	0.0	1.7	2	0	0	2	2	2	0	PhoP	regulatory	network	protein	YrbL
Ham1p_like	PF01725.11	gi|332796382|ref|YP_004457882.1|	-	2.7e-53	180.1	0.2	3.1e-53	179.9	0.1	1.0	1	0	0	1	1	1	1	Ham1	family
Aldo_ket_red	PF00248.16	gi|332796383|ref|YP_004457883.1|	-	1.2e-47	162.1	0.0	1.7e-47	161.5	0.0	1.2	1	1	0	1	1	1	1	Aldo/keto	reductase	family
SICA_alpha	PF12887.2	gi|332796386|ref|YP_004457886.1|	-	0.00089	19.0	1.3	0.001	18.8	0.9	1.1	1	0	0	1	1	1	1	SICA	extracellular	alpha	domain
DUF2578	PF10843.3	gi|332796386|ref|YP_004457886.1|	-	0.0015	18.2	3.0	0.0019	17.9	2.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2578)
OmpH	PF03938.9	gi|332796386|ref|YP_004457886.1|	-	0.0027	17.6	2.9	0.003	17.5	2.0	1.1	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
Mitofilin	PF09731.4	gi|332796386|ref|YP_004457886.1|	-	0.0067	15.1	5.4	0.0071	15.0	3.7	1.1	1	0	0	1	1	1	1	Mitochondrial	inner	membrane	protein
DUF3410	PF11890.3	gi|332796386|ref|YP_004457886.1|	-	0.0098	15.5	0.3	0.013	15.1	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3410)
GLYCAM-1	PF05242.6	gi|332796386|ref|YP_004457886.1|	-	0.01	15.7	3.5	0.094	12.6	0.7	2.0	1	1	1	2	2	2	0	Glycosylation-dependent	cell	adhesion	molecule	1	(GlyCAM-1)
Spore_III_AB	PF09548.5	gi|332796386|ref|YP_004457886.1|	-	0.012	15.3	2.8	0.024	14.4	1.9	1.5	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
DUF3417	PF11897.3	gi|332796386|ref|YP_004457886.1|	-	0.014	15.3	0.1	0.018	14.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3417)
DUF445	PF04286.7	gi|332796386|ref|YP_004457886.1|	-	0.023	14.2	4.1	0.027	14.0	2.9	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Rsa3	PF14615.1	gi|332796386|ref|YP_004457886.1|	-	0.032	13.4	1.8	0.23	10.7	0.1	2.3	2	0	0	2	2	2	0	Ribosome-assembly	protein	3
DUF883	PF05957.8	gi|332796386|ref|YP_004457886.1|	-	0.036	14.4	3.9	0.061	13.7	1.2	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF2624	PF11116.3	gi|332796386|ref|YP_004457886.1|	-	0.037	14.5	2.6	0.43	11.1	0.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2624)
MVP_shoulder	PF11978.3	gi|332796386|ref|YP_004457886.1|	-	0.037	13.9	0.2	0.049	13.5	0.1	1.1	1	0	0	1	1	1	0	Shoulder	domain
RapA_C	PF12137.3	gi|332796386|ref|YP_004457886.1|	-	0.037	12.8	1.8	0.044	12.6	1.2	1.2	1	0	0	1	1	1	0	RNA	polymerase	recycling	family	C-terminal
V-ATPase_G	PF03179.10	gi|332796386|ref|YP_004457886.1|	-	0.04	14.2	7.2	0.87	9.9	4.9	2.4	1	1	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
Prominin	PF05478.6	gi|332796386|ref|YP_004457886.1|	-	0.053	11.0	1.2	0.056	10.9	0.9	1.1	1	0	0	1	1	1	0	Prominin
PP1_inhibitor	PF05361.7	gi|332796386|ref|YP_004457886.1|	-	0.071	12.7	3.7	0.078	12.6	2.0	1.4	1	1	0	1	1	1	0	PKC-activated	protein	phosphatase-1	inhibitor
Z1	PF10593.4	gi|332796386|ref|YP_004457886.1|	-	0.076	12.2	1.5	0.077	12.2	1.1	1.2	1	0	0	1	1	1	0	Z1	domain
DUF106	PF01956.11	gi|332796386|ref|YP_004457886.1|	-	0.15	11.6	1.6	0.18	11.2	1.1	1.2	1	0	0	1	1	1	0	Integral	membrane	protein	DUF106
V-SNARE	PF05008.10	gi|332796386|ref|YP_004457886.1|	-	0.18	12.0	7.6	0.27	11.4	2.4	2.5	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
ATP-synt_F6	PF05511.6	gi|332796386|ref|YP_004457886.1|	-	0.18	11.7	3.6	0.92	9.4	1.0	2.4	1	1	2	3	3	3	0	Mitochondrial	ATP	synthase	coupling	factor	6
Sox_N	PF12444.3	gi|332796386|ref|YP_004457886.1|	-	0.19	12.8	1.3	0.25	12.4	0.9	1.3	1	1	0	1	1	1	0	Sox	developmental	protein	N	terminal
ATP-synt_B	PF00430.13	gi|332796386|ref|YP_004457886.1|	-	0.19	11.5	9.8	0.4	10.4	6.8	1.5	1	1	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
DUF1140	PF06600.6	gi|332796386|ref|YP_004457886.1|	-	0.27	11.3	4.7	0.23	11.6	2.5	1.4	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1140)
PNPase	PF03726.9	gi|332796386|ref|YP_004457886.1|	-	0.49	10.6	7.2	1.8	8.8	2.0	2.3	1	1	1	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
DUF4230	PF14014.1	gi|332796386|ref|YP_004457886.1|	-	0.56	10.0	7.1	0.7	9.7	4.9	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4230)
ACCA	PF03255.9	gi|332796386|ref|YP_004457886.1|	-	0.83	9.1	7.7	2.1	7.9	0.2	2.1	1	1	1	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
GLTP	PF08718.6	gi|332796386|ref|YP_004457886.1|	-	0.89	9.5	4.9	1.3	9.0	2.4	1.7	1	1	1	2	2	2	0	Glycolipid	transfer	protein	(GLTP)
Peptidase_M41	PF01434.13	gi|332796386|ref|YP_004457886.1|	-	1.2	8.5	5.3	3.2	7.1	3.7	1.7	1	1	0	1	1	1	0	Peptidase	family	M41
Duffy_binding	PF05424.6	gi|332796386|ref|YP_004457886.1|	-	1.3	8.8	5.9	0.63	9.8	1.9	1.9	1	1	1	2	2	2	0	Duffy	binding	domain
Spore_GerAC	PF05504.6	gi|332796386|ref|YP_004457886.1|	-	1.3	8.7	11.5	2.7	7.7	2.2	2.2	1	1	1	2	2	2	0	Spore	germination	B3/	GerAC	like,	C-terminal
Rad50_zn_hook	PF04423.9	gi|332796386|ref|YP_004457886.1|	-	4.3	6.8	7.5	10	5.6	0.5	2.8	1	1	1	2	2	2	0	Rad50	zinc	hook	motif
GCD14	PF08704.5	gi|332796387|ref|YP_004457887.1|	-	1.1e-34	119.9	0.0	1.5e-34	119.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|332796387|ref|YP_004457887.1|	-	8.1e-13	48.2	0.0	1.1e-12	47.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332796387|ref|YP_004457887.1|	-	6e-11	42.9	0.0	9.6e-11	42.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|332796387|ref|YP_004457887.1|	-	7.7e-10	38.6	0.0	1e-09	38.2	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|332796387|ref|YP_004457887.1|	-	7.9e-08	32.3	0.0	1.9e-07	31.1	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|332796387|ref|YP_004457887.1|	-	1.7e-06	27.3	0.0	2.5e-06	26.7	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.1	gi|332796387|ref|YP_004457887.1|	-	3.6e-05	23.5	0.0	0.00011	22.0	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|332796387|ref|YP_004457887.1|	-	3.8e-05	23.3	0.0	6e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
MTS	PF05175.9	gi|332796387|ref|YP_004457887.1|	-	4.5e-05	22.8	0.0	0.00023	20.5	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_32	PF13679.1	gi|332796387|ref|YP_004457887.1|	-	5.5e-05	22.8	0.0	9.7e-05	22.0	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|332796387|ref|YP_004457887.1|	-	0.00015	20.9	0.0	0.00021	20.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_11	PF08241.7	gi|332796387|ref|YP_004457887.1|	-	0.00056	20.3	0.0	0.0025	18.2	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332796387|ref|YP_004457887.1|	-	0.00098	19.4	0.0	0.0017	18.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|332796387|ref|YP_004457887.1|	-	0.0017	17.4	0.0	0.0024	16.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_24	PF13578.1	gi|332796387|ref|YP_004457887.1|	-	0.0048	17.7	0.0	0.0085	16.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|332796387|ref|YP_004457887.1|	-	0.0086	15.1	0.0	0.013	14.5	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Gcd10p	PF04189.8	gi|332796387|ref|YP_004457887.1|	-	0.012	14.7	0.0	0.082	12.0	0.0	1.9	2	0	0	2	2	2	0	Gcd10p	family
Methyltransf_12	PF08242.7	gi|332796387|ref|YP_004457887.1|	-	0.018	15.4	0.0	0.05	14.0	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
GCD14_N	PF14801.1	gi|332796387|ref|YP_004457887.1|	-	0.025	14.1	0.1	0.046	13.2	0.1	1.4	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit	N-term
FtsJ	PF01728.14	gi|332796387|ref|YP_004457887.1|	-	0.052	13.5	0.0	0.15	12.0	0.0	1.7	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_4	PF02390.12	gi|332796387|ref|YP_004457887.1|	-	0.093	11.7	0.0	0.16	11.0	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
RHH_1	PF01402.16	gi|332796388|ref|YP_004457888.1|	-	1.4e-07	31.0	0.0	1.7e-07	30.8	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_2	PF03693.9	gi|332796388|ref|YP_004457888.1|	-	4.1e-07	30.0	0.0	4.2e-07	30.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0156)
TrmB	PF01978.14	gi|332796389|ref|YP_004457889.1|	-	1.8e-19	69.2	0.1	3.8e-19	68.1	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|332796389|ref|YP_004457889.1|	-	3.5e-10	39.0	0.7	3.5e-10	39.0	0.5	2.2	3	0	0	3	3	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|332796389|ref|YP_004457889.1|	-	4.9e-06	26.1	0.4	1.4e-05	24.6	0.2	1.8	1	0	0	1	1	1	1	MarR	family
HTH_28	PF13518.1	gi|332796389|ref|YP_004457889.1|	-	1e-05	25.4	0.3	5.4e-05	23.1	0.1	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|332796389|ref|YP_004457889.1|	-	3e-05	23.5	0.1	7e-05	22.3	0.0	1.6	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|332796389|ref|YP_004457889.1|	-	3.1e-05	23.5	0.1	5.7e-05	22.7	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|332796389|ref|YP_004457889.1|	-	0.0001	22.0	0.4	0.0012	18.6	0.0	2.5	2	1	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.1	gi|332796389|ref|YP_004457889.1|	-	0.00038	20.4	0.0	0.00082	19.3	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|332796389|ref|YP_004457889.1|	-	0.00038	20.7	0.0	0.0014	18.8	0.0	1.9	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_29	PF13551.1	gi|332796389|ref|YP_004457889.1|	-	0.00062	19.8	0.1	0.0024	17.9	0.0	1.9	1	1	1	2	2	2	1	Winged	helix-turn	helix
HTH_23	PF13384.1	gi|332796389|ref|YP_004457889.1|	-	0.00081	18.9	0.5	0.0092	15.6	0.1	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
Penicillinase_R	PF03965.11	gi|332796389|ref|YP_004457889.1|	-	0.0019	18.2	0.0	0.0031	17.5	0.0	1.4	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_CodY	PF08222.6	gi|332796389|ref|YP_004457889.1|	-	0.0029	16.9	0.0	0.0072	15.6	0.0	1.7	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
Herpes_IR6	PF06307.7	gi|332796389|ref|YP_004457889.1|	-	0.0029	16.9	0.0	0.0042	16.4	0.0	1.1	1	0	0	1	1	1	1	Herpesvirus	IR6	protein
HTH_20	PF12840.2	gi|332796389|ref|YP_004457889.1|	-	0.0037	17.0	0.1	0.0074	16.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_10	PF04967.7	gi|332796389|ref|YP_004457889.1|	-	0.0041	16.6	0.1	0.032	13.8	0.0	2.3	2	0	0	2	2	2	1	HTH	DNA	binding	domain
HTH_17	PF12728.2	gi|332796389|ref|YP_004457889.1|	-	0.0043	17.2	0.2	0.15	12.3	0.1	2.9	3	0	0	3	3	3	1	Helix-turn-helix	domain
Mga	PF05043.8	gi|332796389|ref|YP_004457889.1|	-	0.0045	17.2	0.0	0.013	15.7	0.0	1.7	1	0	0	1	1	1	1	Mga	helix-turn-helix	domain
FeoC	PF09012.5	gi|332796389|ref|YP_004457889.1|	-	0.0047	16.6	0.0	0.0089	15.7	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_11	PF08279.7	gi|332796389|ref|YP_004457889.1|	-	0.0048	16.5	0.5	0.02	14.4	0.2	2.2	1	1	1	2	2	2	1	HTH	domain
GntR	PF00392.16	gi|332796389|ref|YP_004457889.1|	-	0.0052	16.1	0.7	0.015	14.6	0.1	2.1	2	1	1	3	3	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_AsnC-type	PF13404.1	gi|332796389|ref|YP_004457889.1|	-	0.0088	15.5	0.1	0.025	14.1	0.0	1.8	1	1	1	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332796389|ref|YP_004457889.1|	-	0.0098	15.5	0.0	0.026	14.1	0.0	1.7	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_26	PF13443.1	gi|332796389|ref|YP_004457889.1|	-	0.018	15.2	0.6	0.12	12.5	0.1	2.5	2	1	1	3	3	2	0	Cro/C1-type	HTH	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|332796389|ref|YP_004457889.1|	-	0.023	14.2	0.1	0.083	12.3	0.0	1.9	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HTH_36	PF13730.1	gi|332796389|ref|YP_004457889.1|	-	0.023	14.8	0.4	0.13	12.4	0.3	2.2	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|332796389|ref|YP_004457889.1|	-	0.025	14.4	0.1	0.088	12.6	0.0	1.9	2	0	0	2	2	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_7	PF02796.10	gi|332796389|ref|YP_004457889.1|	-	0.028	14.2	0.6	0.17	11.8	0.1	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
Rrf2	PF02082.15	gi|332796389|ref|YP_004457889.1|	-	0.032	14.3	0.0	0.069	13.2	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
PadR	PF03551.9	gi|332796389|ref|YP_004457889.1|	-	0.036	13.8	0.1	0.097	12.4	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF387	PF04079.11	gi|332796389|ref|YP_004457889.1|	-	0.047	13.0	0.0	0.086	12.2	0.0	1.4	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
HTH_31	PF13560.1	gi|332796389|ref|YP_004457889.1|	-	0.054	13.7	0.1	0.69	10.1	0.1	2.1	1	1	1	2	2	2	0	Helix-turn-helix	domain
FUR	PF01475.14	gi|332796389|ref|YP_004457889.1|	-	0.066	13.1	0.0	0.18	11.7	0.0	1.7	2	0	0	2	2	1	0	Ferric	uptake	regulator	family
DUF3342	PF11822.3	gi|332796389|ref|YP_004457889.1|	-	0.066	12.3	0.0	0.09	11.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3342)
HTH_8	PF02954.14	gi|332796389|ref|YP_004457889.1|	-	0.17	11.4	3.8	1.4	8.4	0.0	3.1	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	Fis	family
Ribosomal_S25	PF03297.10	gi|332796390|ref|YP_004457890.1|	-	1.9e-11	43.9	7.3	2.1e-11	43.7	5.1	1.0	1	0	0	1	1	1	1	S25	ribosomal	protein
Rrf2	PF02082.15	gi|332796390|ref|YP_004457890.1|	-	0.00014	21.8	2.8	0.086	12.9	0.1	2.4	1	1	1	2	2	2	2	Transcriptional	regulator
DDRGK	PF09756.4	gi|332796390|ref|YP_004457890.1|	-	0.00023	20.6	7.2	0.0003	20.2	5.0	1.1	1	0	0	1	1	1	1	DDRGK	domain
HTH_24	PF13412.1	gi|332796390|ref|YP_004457890.1|	-	0.0004	19.7	0.7	0.00079	18.7	0.5	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
IF2_N	PF04760.10	gi|332796390|ref|YP_004457890.1|	-	0.0012	18.4	1.7	0.76	9.4	0.0	2.5	1	1	1	2	2	2	2	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_11	PF08279.7	gi|332796390|ref|YP_004457890.1|	-	0.0031	17.1	1.6	0.0033	17.0	0.2	1.7	2	0	0	2	2	2	1	HTH	domain
Blo-t-5	PF11642.3	gi|332796390|ref|YP_004457890.1|	-	0.0052	16.5	3.0	0.0063	16.2	2.1	1.1	1	0	0	1	1	1	1	Mite	allergen	Blo	t	5
MarR_2	PF12802.2	gi|332796390|ref|YP_004457890.1|	-	0.01	15.4	0.0	0.019	14.6	0.0	1.3	1	0	0	1	1	1	0	MarR	family
Pox_VLTF3	PF04947.9	gi|332796390|ref|YP_004457890.1|	-	0.042	13.3	6.8	0.056	12.9	4.2	1.5	1	1	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
AF0941-like	PF14591.1	gi|332796390|ref|YP_004457890.1|	-	0.054	13.5	7.0	4.2	7.4	3.7	2.1	2	0	0	2	2	2	0	AF0941-like
DUF4570	PF15134.1	gi|332796390|ref|YP_004457890.1|	-	0.057	13.2	2.7	0.092	12.5	1.9	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4570)
RPA_C	PF08784.6	gi|332796390|ref|YP_004457890.1|	-	0.075	13.4	0.8	0.094	13.1	0.6	1.1	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_Crp_2	PF13545.1	gi|332796390|ref|YP_004457890.1|	-	0.079	12.7	1.7	1.5	8.6	0.1	2.2	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
TrmB	PF01978.14	gi|332796390|ref|YP_004457890.1|	-	0.12	12.1	0.8	0.32	10.7	0.1	2.1	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|332796390|ref|YP_004457890.1|	-	0.13	11.8	0.0	0.18	11.3	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Pox_G5	PF04599.7	gi|332796390|ref|YP_004457890.1|	-	0.19	10.4	5.4	0.21	10.2	3.8	1.0	1	0	0	1	1	1	0	Poxvirus	G5	protein
EAP30	PF04157.11	gi|332796390|ref|YP_004457890.1|	-	0.28	10.3	3.8	0.2	10.7	0.9	1.8	1	1	1	2	2	2	0	EAP30/Vps36	family
P30	PF07390.6	gi|332796390|ref|YP_004457890.1|	-	0.28	10.6	3.8	0.33	10.4	2.6	1.1	1	0	0	1	1	1	0	Mycoplasma	P30	protein
FbpA	PF05833.6	gi|332796390|ref|YP_004457890.1|	-	0.31	9.5	8.5	0.34	9.3	5.9	1.0	1	0	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF2250	PF10007.4	gi|332796390|ref|YP_004457890.1|	-	0.69	9.8	5.4	1.7	8.5	0.4	2.6	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
CUT	PF02376.10	gi|332796390|ref|YP_004457890.1|	-	4.8	7.0	7.0	15	5.4	0.0	2.9	2	1	1	3	3	3	0	CUT	domain
CN_hydrolase	PF00795.17	gi|332796391|ref|YP_004457891.1|	-	4.8e-13	48.8	0.0	8.1e-13	48.1	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
AP_endonuc_2	PF01261.19	gi|332796391|ref|YP_004457891.1|	-	0.038	13.2	0.0	0.057	12.6	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
Ribosomal_S19	PF00203.16	gi|332796391|ref|YP_004457891.1|	-	0.074	12.6	0.1	0.2	11.3	0.1	1.7	1	0	0	1	1	1	0	Ribosomal	protein	S19
Topoisom_bac	PF01131.15	gi|332796392|ref|YP_004457892.1|	-	8.3e-83	278.4	0.1	4.8e-82	275.9	0.1	2.1	1	1	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|332796392|ref|YP_004457892.1|	-	1.2e-25	89.4	0.0	5.9e-25	87.1	0.0	2.3	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|332796392|ref|YP_004457892.1|	-	3.4e-13	49.4	0.0	1.1e-12	47.7	0.0	1.9	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|332796392|ref|YP_004457892.1|	-	0.00023	21.0	0.0	0.00066	19.5	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DnaB_C	PF03796.10	gi|332796392|ref|YP_004457892.1|	-	0.0062	15.4	0.0	0.016	14.1	0.0	1.7	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.1	gi|332796392|ref|YP_004457892.1|	-	0.01	15.2	0.0	0.026	13.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
HypA	PF01155.14	gi|332796392|ref|YP_004457892.1|	-	0.031	13.9	0.7	8.6	6.0	0.0	2.9	3	0	0	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
AAA_11	PF13086.1	gi|332796392|ref|YP_004457892.1|	-	0.036	13.6	0.1	0.11	12.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|332796392|ref|YP_004457892.1|	-	0.1	12.3	0.0	0.28	10.9	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
zf-ribbon_3	PF13248.1	gi|332796392|ref|YP_004457892.1|	-	1	8.6	5.8	14	5.0	1.5	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796392|ref|YP_004457892.1|	-	1.1	8.9	3.6	23	4.7	0.4	2.8	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Sgf11	PF08209.6	gi|332796392|ref|YP_004457892.1|	-	1.7	8.0	3.1	0.75	9.1	0.2	1.8	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-FPG_IleRS	PF06827.9	gi|332796392|ref|YP_004457892.1|	-	2	8.1	4.7	1.6	8.4	0.1	2.5	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|332796392|ref|YP_004457892.1|	-	2.8	7.5	6.3	13	5.4	1.3	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|332796392|ref|YP_004457892.1|	-	3.2	7.3	7.5	4.5	6.8	0.1	2.9	2	1	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Prim_Zn_Ribbon	PF08273.7	gi|332796392|ref|YP_004457892.1|	-	4.6	7.4	6.6	0.76	9.8	0.4	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
Zn-ribbon_8	PF09723.5	gi|332796392|ref|YP_004457892.1|	-	8.6	6.4	6.1	23	5.0	0.3	2.9	2	0	0	2	2	2	0	Zinc	ribbon	domain
AAA	PF00004.24	gi|332796393|ref|YP_004457893.1|	-	8.1e-101	333.4	0.0	8.9e-50	168.3	0.0	3.0	3	0	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|332796393|ref|YP_004457893.1|	-	5.3e-22	77.5	0.0	2.1e-21	75.6	0.1	2.1	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|332796393|ref|YP_004457893.1|	-	1.1e-16	60.6	0.1	2.4e-08	33.3	0.0	3.0	3	1	0	3	3	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_2	PF07724.9	gi|332796393|ref|YP_004457893.1|	-	1.2e-14	54.5	0.0	2.3e-07	30.9	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|332796393|ref|YP_004457893.1|	-	1.5e-14	54.3	0.0	2.1e-07	31.1	0.0	3.1	2	1	0	2	2	2	2	AAA	ATPase	domain
CDC48_2	PF02933.12	gi|332796393|ref|YP_004457893.1|	-	2.1e-14	52.8	0.6	5.5e-14	51.5	0.4	1.8	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_22	PF13401.1	gi|332796393|ref|YP_004457893.1|	-	4.7e-14	52.6	0.3	8.2e-06	25.9	0.0	4.3	2	2	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|332796393|ref|YP_004457893.1|	-	3.9e-13	50.2	0.0	3.8e-07	30.9	0.0	3.1	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|332796393|ref|YP_004457893.1|	-	8.8e-12	44.4	0.0	2.9e-05	22.9	0.0	2.8	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_14	PF13173.1	gi|332796393|ref|YP_004457893.1|	-	9.9e-12	44.8	0.0	1.4e-05	24.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|332796393|ref|YP_004457893.1|	-	4e-11	42.8	1.2	0.00098	18.8	0.1	4.3	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|332796393|ref|YP_004457893.1|	-	1.2e-10	41.4	0.0	0.0005	19.9	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|332796393|ref|YP_004457893.1|	-	2.9e-10	39.5	0.0	0.00026	20.1	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|332796393|ref|YP_004457893.1|	-	5.7e-10	38.8	0.1	0.00081	18.8	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|332796393|ref|YP_004457893.1|	-	3.7e-09	36.9	0.5	0.00011	22.4	0.0	2.9	3	0	0	3	3	2	2	AAA	domain
AAA_25	PF13481.1	gi|332796393|ref|YP_004457893.1|	-	1.9e-08	33.9	1.4	0.0049	16.2	0.0	3.6	2	1	1	3	3	3	2	AAA	domain
Vps4_C	PF09336.5	gi|332796393|ref|YP_004457893.1|	-	3.8e-08	33.0	0.1	0.00071	19.4	0.0	2.9	2	0	0	2	2	2	2	Vps4	C	terminal	oligomerisation	domain
AAA_28	PF13521.1	gi|332796393|ref|YP_004457893.1|	-	5.2e-08	33.0	0.0	0.016	15.1	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|332796393|ref|YP_004457893.1|	-	1.8e-07	31.2	0.0	0.0058	16.7	0.0	3.1	3	0	0	3	3	2	2	RNA	helicase
Mg_chelatase	PF01078.16	gi|332796393|ref|YP_004457893.1|	-	2.2e-07	30.2	1.1	0.0073	15.4	0.1	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Arch_ATPase	PF01637.13	gi|332796393|ref|YP_004457893.1|	-	5.4e-07	29.5	0.0	0.0023	17.6	0.0	3.5	2	1	1	3	3	3	1	Archaeal	ATPase
NACHT	PF05729.7	gi|332796393|ref|YP_004457893.1|	-	7.2e-07	29.0	0.6	0.18	11.4	0.0	3.9	4	0	0	4	4	4	2	NACHT	domain
AAA_24	PF13479.1	gi|332796393|ref|YP_004457893.1|	-	2.9e-06	27.0	0.1	0.049	13.2	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|332796393|ref|YP_004457893.1|	-	4.4e-06	26.3	1.6	0.025	14.3	0.2	2.9	2	0	0	2	2	2	2	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|332796393|ref|YP_004457893.1|	-	1.1e-05	24.9	0.1	0.27	10.6	0.0	3.7	3	1	0	3	3	2	2	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|332796393|ref|YP_004457893.1|	-	1.3e-05	24.8	0.0	0.084	12.4	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
KaiC	PF06745.8	gi|332796393|ref|YP_004457893.1|	-	1.6e-05	24.1	1.6	0.033	13.3	0.0	3.9	2	2	2	4	4	4	1	KaiC
Sigma54_activ_2	PF14532.1	gi|332796393|ref|YP_004457893.1|	-	1.8e-05	24.7	0.0	0.066	13.2	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|332796393|ref|YP_004457893.1|	-	2.6e-05	24.5	0.0	0.92	9.8	0.0	3.5	3	0	0	3	3	3	2	ABC	transporter
Bac_DnaA	PF00308.13	gi|332796393|ref|YP_004457893.1|	-	5.6e-05	22.8	0.0	0.017	14.8	0.0	2.9	2	1	0	2	2	2	1	Bacterial	dnaA	protein
DUF815	PF05673.8	gi|332796393|ref|YP_004457893.1|	-	0.00014	20.9	0.0	0.12	11.2	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
UPF0079	PF02367.12	gi|332796393|ref|YP_004457893.1|	-	0.00016	21.3	0.0	0.57	9.8	0.0	2.8	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
Parvo_NS1	PF01057.12	gi|332796393|ref|YP_004457893.1|	-	0.00025	19.9	0.1	0.6	8.9	0.0	2.4	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
SKI	PF01202.17	gi|332796393|ref|YP_004457893.1|	-	0.00039	20.3	0.0	0.36	10.6	0.0	2.6	2	0	0	2	2	2	1	Shikimate	kinase
PhoH	PF02562.11	gi|332796393|ref|YP_004457893.1|	-	0.00047	19.4	1.1	0.11	11.6	0.2	2.6	2	0	0	2	2	2	1	PhoH-like	protein
NTPase_1	PF03266.10	gi|332796393|ref|YP_004457893.1|	-	0.0011	18.7	1.5	7.3	6.2	0.0	4.1	2	2	2	4	4	4	0	NTPase
T2SE	PF00437.15	gi|332796393|ref|YP_004457893.1|	-	0.002	17.0	0.0	1.3	7.8	0.0	2.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AFG1_ATPase	PF03969.11	gi|332796393|ref|YP_004457893.1|	-	0.002	17.0	0.1	1.7	7.3	0.1	2.7	2	1	0	2	2	2	2	AFG1-like	ATPase
NB-ARC	PF00931.17	gi|332796393|ref|YP_004457893.1|	-	0.0023	16.8	0.1	1.4	7.6	0.0	2.5	2	0	0	2	2	2	1	NB-ARC	domain
AAA_11	PF13086.1	gi|332796393|ref|YP_004457893.1|	-	0.0039	16.7	0.0	0.85	9.1	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|332796393|ref|YP_004457893.1|	-	0.0051	16.3	0.0	0.75	9.2	0.0	2.5	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
IPT	PF01745.11	gi|332796393|ref|YP_004457893.1|	-	0.0053	15.9	0.1	1	8.5	0.0	2.4	2	0	0	2	2	2	1	Isopentenyl	transferase
DUF2075	PF09848.4	gi|332796393|ref|YP_004457893.1|	-	0.0068	15.4	0.0	1.2	7.9	0.0	2.4	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_10	PF12846.2	gi|332796393|ref|YP_004457893.1|	-	0.0085	15.5	2.5	4	6.7	0.1	3.7	2	2	1	3	3	3	0	AAA-like	domain
KTI12	PF08433.5	gi|332796393|ref|YP_004457893.1|	-	0.017	14.3	0.0	5.6	6.0	0.0	2.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_29	PF13555.1	gi|332796393|ref|YP_004457893.1|	-	0.017	14.6	0.2	6.5	6.3	0.0	3.3	4	0	0	4	4	3	0	P-loop	containing	region	of	AAA	domain
ResIII	PF04851.10	gi|332796393|ref|YP_004457893.1|	-	0.025	14.3	0.0	3.3	7.5	0.0	2.6	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Guanylate_kin	PF00625.16	gi|332796393|ref|YP_004457893.1|	-	0.034	13.5	0.7	9.8	5.5	0.0	3.8	4	1	1	5	5	4	0	Guanylate	kinase
PduV-EutP	PF10662.4	gi|332796393|ref|YP_004457893.1|	-	0.05	13.0	0.0	14	5.2	0.0	2.8	3	0	0	3	3	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
UFD1	PF03152.9	gi|332796393|ref|YP_004457893.1|	-	0.059	12.5	0.1	0.13	11.3	0.1	1.5	1	0	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
Viral_helicase1	PF01443.13	gi|332796393|ref|YP_004457893.1|	-	0.065	12.7	0.0	2.7	7.4	0.0	2.4	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
MMR_HSR1	PF01926.18	gi|332796393|ref|YP_004457893.1|	-	0.086	12.8	0.0	4.3	7.3	0.0	2.7	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_23	PF13476.1	gi|332796393|ref|YP_004457893.1|	-	0.087	13.1	0.0	8.8	6.5	0.0	2.8	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|332796393|ref|YP_004457893.1|	-	0.11	12.0	0.1	5.5	6.5	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_21	PF13304.1	gi|332796393|ref|YP_004457893.1|	-	1.4	8.8	3.2	16	5.3	0.4	3.2	2	2	0	2	2	2	0	AAA	domain
PhosphMutase	PF10143.4	gi|332796394|ref|YP_004457894.1|	-	4.2e-58	195.7	0.0	6.9e-58	195.0	0.0	1.4	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|332796394|ref|YP_004457894.1|	-	5e-50	170.2	0.3	5.8e-50	170.0	0.2	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|332796394|ref|YP_004457894.1|	-	1.7e-05	24.3	0.3	0.00012	21.5	0.0	2.3	3	0	0	3	3	3	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Sulfatase	PF00884.18	gi|332796394|ref|YP_004457894.1|	-	0.003	16.8	0.0	0.021	14.0	0.0	2.1	2	1	0	2	2	2	1	Sulfatase
AAA_28	PF13521.1	gi|332796394|ref|YP_004457894.1|	-	0.0032	17.4	0.0	0.0056	16.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
DUF359	PF04019.7	gi|332796395|ref|YP_004457895.1|	-	7.5e-36	122.1	0.0	9.9e-36	121.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
SHS2_Rpb7-N	PF03876.12	gi|332796396|ref|YP_004457896.1|	-	2e-16	59.8	0.0	3.9e-16	58.9	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|332796396|ref|YP_004457896.1|	-	2.2e-15	56.5	0.4	4.1e-15	55.6	0.3	1.4	1	0	0	1	1	1	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.7	gi|332796396|ref|YP_004457896.1|	-	0.0062	16.7	0.0	0.01	16.0	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	Rpc25
Fcf1	PF04900.7	gi|332796397|ref|YP_004457897.1|	-	5e-08	32.9	0.0	8.6e-08	32.2	0.0	1.4	1	1	0	1	1	1	1	Fcf1
PIN	PF01850.16	gi|332796397|ref|YP_004457897.1|	-	1.3e-06	28.7	1.2	2.4e-06	27.8	0.9	1.4	1	1	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|332796397|ref|YP_004457897.1|	-	0.00016	21.7	0.3	0.0039	17.2	0.2	2.0	1	1	0	1	1	1	1	PIN	domain
DUF4116	PF13475.1	gi|332796397|ref|YP_004457897.1|	-	0.13	11.7	3.5	4.4	6.8	2.4	2.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4116)
GTP_EFTU	PF00009.22	gi|332796398|ref|YP_004457898.1|	-	1.7e-41	141.7	0.0	2.8e-41	141.0	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|332796398|ref|YP_004457898.1|	-	1.1e-30	105.5	1.0	2.2e-30	104.5	0.7	1.6	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|332796398|ref|YP_004457898.1|	-	2.7e-06	27.3	0.4	2.8e-05	24.1	0.3	2.3	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
PduV-EutP	PF10662.4	gi|332796398|ref|YP_004457898.1|	-	0.001	18.5	0.6	0.43	10.0	0.1	2.4	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|332796398|ref|YP_004457898.1|	-	0.0013	18.6	0.0	0.0032	17.4	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|332796398|ref|YP_004457898.1|	-	0.0082	15.4	0.4	3.4	6.9	0.0	2.4	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|332796398|ref|YP_004457898.1|	-	0.08	12.7	0.0	0.22	11.3	0.0	1.8	2	0	0	2	2	2	0	Dynamin	family
Miro	PF08477.8	gi|332796398|ref|YP_004457898.1|	-	0.12	12.9	0.1	0.33	11.4	0.0	2.0	1	1	0	1	1	1	0	Miro-like	protein
Ribosomal_S6e	PF01092.14	gi|332796399|ref|YP_004457899.1|	-	1.9e-21	76.0	0.1	4.9e-21	74.6	0.0	1.7	1	1	1	2	2	2	1	Ribosomal	protein	S6e
T4_neck-protein	PF11649.3	gi|332796399|ref|YP_004457899.1|	-	0.036	13.3	0.4	0.27	10.4	0.0	2.0	1	1	1	2	2	2	0	Virus	neck	protein
PG_binding_4	PF12229.3	gi|332796399|ref|YP_004457899.1|	-	0.26	11.5	2.7	6	7.1	0.4	2.5	1	1	1	2	2	2	0	Putative	peptidoglycan	binding	domain
CbiX	PF01903.12	gi|332796400|ref|YP_004457900.1|	-	4.4e-24	84.6	0.0	5e-24	84.4	0.0	1.0	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.6	gi|332796400|ref|YP_004457900.1|	-	2.1e-05	23.7	0.0	2.4e-05	23.5	0.0	1.0	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
G6PD_N	PF00479.17	gi|332796400|ref|YP_004457900.1|	-	0.0014	18.8	0.0	0.0015	18.8	0.0	1.1	1	0	0	1	1	1	1	Glucose-6-phosphate	dehydrogenase,	NAD	binding	domain
RVT_3	PF13456.1	gi|332796401|ref|YP_004457901.1|	-	1.5e-24	85.6	0.0	1.9e-24	85.2	0.0	1.1	1	0	0	1	1	1	1	Reverse	transcriptase-like
RNase_H	PF00075.19	gi|332796401|ref|YP_004457901.1|	-	5.8e-10	39.6	0.0	7.1e-10	39.3	0.0	1.1	1	0	0	1	1	1	1	RNase	H
DUF2423	PF10338.4	gi|332796401|ref|YP_004457901.1|	-	0.051	13.5	1.3	8.3	6.4	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2423)
Ribosomal_S13_N	PF08069.7	gi|332796402|ref|YP_004457902.1|	-	1.8e-24	85.3	0.6	3.4e-24	84.4	0.1	1.8	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|332796402|ref|YP_004457902.1|	-	8.3e-20	70.3	0.1	1.1e-19	69.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
DUF2408	PF10303.4	gi|332796402|ref|YP_004457902.1|	-	0.056	13.5	0.0	0.092	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
YflT	PF11181.3	gi|332796402|ref|YP_004457902.1|	-	0.14	12.2	0.0	0.23	11.6	0.0	1.4	1	1	0	1	1	1	0	Heat	induced	stress	protein	YflT
Meth_synt_2	PF01717.13	gi|332796403|ref|YP_004457903.1|	-	8.1e-93	310.9	0.0	9.2e-93	310.7	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|332796403|ref|YP_004457903.1|	-	4.3e-26	91.9	1.3	8.7e-21	74.4	1.5	2.0	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
URO-D	PF01208.12	gi|332796403|ref|YP_004457903.1|	-	0.0024	16.8	0.0	0.0032	16.4	0.0	1.1	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
PYNP_C	PF07831.8	gi|332796403|ref|YP_004457903.1|	-	0.13	11.7	0.5	10	5.6	0.0	2.4	2	0	0	2	2	2	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Meth_synt_1	PF08267.7	gi|332796404|ref|YP_004457904.1|	-	2.7e-52	177.9	3.2	3.9e-51	174.1	2.2	2.0	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|332796404|ref|YP_004457904.1|	-	4.5e-12	45.5	0.0	1e-11	44.4	0.0	1.5	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
DFP	PF04127.10	gi|332796404|ref|YP_004457904.1|	-	0.039	13.5	0.0	0.068	12.7	0.0	1.3	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
PCNA_N	PF00705.13	gi|332796405|ref|YP_004457905.1|	-	3.3e-18	65.4	1.3	5.5e-16	58.2	0.1	2.4	2	1	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|332796405|ref|YP_004457905.1|	-	2.1e-13	50.2	0.6	3.4e-11	43.1	0.1	2.4	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|332796405|ref|YP_004457905.1|	-	2.2e-08	33.2	1.4	7.7e-05	21.5	0.0	2.1	1	1	1	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|332796405|ref|YP_004457905.1|	-	1.2e-07	31.1	0.1	2.7e-07	29.9	0.0	1.6	2	0	0	2	2	2	1	Rad9
DNA_pol3_beta_3	PF02768.10	gi|332796405|ref|YP_004457905.1|	-	3.3e-05	23.4	1.3	0.016	14.7	0.0	2.5	2	0	0	2	2	2	2	DNA	polymerase	III	beta	subunit,	C-terminal	domain
Hus1	PF04005.7	gi|332796405|ref|YP_004457905.1|	-	0.022	13.6	0.1	0.062	12.2	0.0	1.6	2	0	0	2	2	2	0	Hus1-like	protein
GATase_3	PF07685.9	gi|332796406|ref|YP_004457906.1|	-	8.4e-26	90.4	0.2	1.2e-25	89.9	0.1	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|332796406|ref|YP_004457906.1|	-	2.3e-18	66.2	0.0	4.6e-18	65.3	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|332796406|ref|YP_004457906.1|	-	1.1e-12	48.0	0.0	2.1e-09	37.2	0.0	2.4	1	1	0	1	1	1	1	AAA	domain
SNAP	PF14938.1	gi|332796406|ref|YP_004457906.1|	-	0.00022	20.4	0.3	0.00034	19.8	0.2	1.1	1	0	0	1	1	1	1	Soluble	NSF	attachment	protein,	SNAP
Aldo_ket_red	PF00248.16	gi|332796406|ref|YP_004457906.1|	-	0.015	14.1	0.0	0.026	13.3	0.0	1.3	1	0	0	1	1	1	0	Aldo/keto	reductase	family
DUF2208	PF09973.4	gi|332796407|ref|YP_004457907.1|	-	6.2e-68	228.5	19.6	7.1e-68	228.3	13.6	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
CTP_transf_1	PF01148.15	gi|332796407|ref|YP_004457907.1|	-	0.012	15.3	8.3	0.016	14.8	5.8	1.2	1	0	0	1	1	1	0	Cytidylyltransferase	family
Phage-A118_gp45	PF10653.4	gi|332796407|ref|YP_004457907.1|	-	0.039	13.8	0.0	0.13	12.0	0.0	1.9	2	0	0	2	2	2	0	Protein	gp45	of	Bacteriophage	A118
DUF4271	PF14093.1	gi|332796407|ref|YP_004457907.1|	-	0.19	11.4	20.9	0.4	10.3	6.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4271)
TrbC	PF04956.8	gi|332796407|ref|YP_004457907.1|	-	0.24	11.4	2.8	0.64	10.0	0.0	2.4	3	0	0	3	3	3	0	TrbC/VIRB2	family
DUF4131	PF13567.1	gi|332796407|ref|YP_004457907.1|	-	0.42	9.9	3.6	0.75	9.1	1.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Tetraspannin	PF00335.15	gi|332796407|ref|YP_004457907.1|	-	1	8.5	5.1	6.6	5.9	0.0	2.4	2	0	0	2	2	2	0	Tetraspanin	family
DUF3792	PF12670.2	gi|332796407|ref|YP_004457907.1|	-	3.3	7.6	9.0	0.31	10.9	1.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3792)
SPC25	PF06703.6	gi|332796407|ref|YP_004457907.1|	-	3.9	7.0	8.6	0.12	11.8	0.5	2.2	2	0	0	2	2	2	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
NapE	PF06796.6	gi|332796408|ref|YP_004457908.1|	-	0.23	10.8	1.3	0.99	8.7	0.0	2.1	2	0	0	2	2	2	0	Periplasmic	nitrate	reductase	protein	NapE
DHBP_synthase	PF00926.14	gi|332796409|ref|YP_004457909.1|	-	2.1e-52	177.1	0.0	2.4e-52	176.9	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DMRL_synthase	PF00885.14	gi|332796410|ref|YP_004457910.1|	-	5.3e-18	65.0	0.1	6.1e-18	64.8	0.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DMRL_synthase	PF00885.14	gi|332796411|ref|YP_004457911.1|	-	1.1e-38	132.1	0.3	1.2e-38	132.0	0.2	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
RII_binding_1	PF10522.4	gi|332796411|ref|YP_004457911.1|	-	0.054	13.6	0.7	0.17	12.1	0.1	2.1	2	0	0	2	2	2	0	RII	binding	domain
DUF885	PF05960.6	gi|332796411|ref|YP_004457911.1|	-	0.1	11.7	0.0	0.14	11.3	0.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
GGDN	PF05165.7	gi|332796412|ref|YP_004457912.1|	-	1.5e-43	148.6	0.0	3.2e-43	147.5	0.0	1.4	1	1	0	1	1	1	1	GGDN	family
Amidohydro_1	PF01979.15	gi|332796413|ref|YP_004457913.1|	-	3.1e-16	59.9	0.0	1.2e-15	58.0	0.0	1.8	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|332796413|ref|YP_004457913.1|	-	3.3e-07	30.6	0.0	5.9e-05	23.2	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|332796413|ref|YP_004457913.1|	-	0.0015	18.3	0.0	0.0029	17.3	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
PCNA_N	PF00705.13	gi|332796414|ref|YP_004457914.1|	-	2.5e-07	30.2	0.9	7.6e-07	28.6	0.2	2.0	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|332796414|ref|YP_004457914.1|	-	6.3e-07	29.3	2.1	0.0001	22.2	0.2	2.9	1	1	2	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
GreA_GreB	PF01272.14	gi|332796414|ref|YP_004457914.1|	-	0.0046	16.6	1.6	0.013	15.1	1.1	1.8	1	1	0	1	1	1	1	Transcription	elongation	factor,	GreA/GreB,	C-term
Rad9	PF04139.8	gi|332796414|ref|YP_004457914.1|	-	0.0095	15.0	0.2	0.013	14.6	0.1	1.3	1	0	0	1	1	1	1	Rad9
Cadherin-like	PF12733.2	gi|332796414|ref|YP_004457914.1|	-	0.047	13.9	2.4	0.42	10.9	0.1	2.4	2	1	0	2	2	2	0	Cadherin-like	beta	sandwich	domain
MAP	PF03642.8	gi|332796414|ref|YP_004457914.1|	-	0.084	13.1	1.5	1.7	8.9	0.0	2.4	2	1	0	2	2	2	0	MAP	domain
OapA	PF04225.7	gi|332796414|ref|YP_004457914.1|	-	0.088	12.7	0.6	3.5	7.5	0.0	2.4	2	0	0	2	2	2	0	Opacity-associated	protein	A	LysM-like	domain
DUF2874	PF11396.3	gi|332796414|ref|YP_004457914.1|	-	0.46	10.4	2.9	5.3	7.0	0.2	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2874)
RNA_pol_Rpo13	PF12136.3	gi|332796415|ref|YP_004457915.1|	-	1.3e-09	37.6	22.0	1.3e-09	37.6	15.3	3.2	2	1	0	2	2	2	1	RNA	polymerase	Rpo13	subunit	HTH	domain
Peptidase_M16_C	PF05193.16	gi|332796415|ref|YP_004457915.1|	-	0.11	12.1	0.4	0.17	11.5	0.3	1.3	1	0	0	1	1	1	0	Peptidase	M16	inactive	domain
Toxin_56	PF15534.1	gi|332796415|ref|YP_004457915.1|	-	0.17	12.4	2.0	0.23	11.9	1.4	1.2	1	0	0	1	1	1	0	Putative	toxin	56
Nse5	PF08691.5	gi|332796415|ref|YP_004457915.1|	-	1.4	7.3	6.5	1.5	7.2	4.5	1.0	1	0	0	1	1	1	0	DNA	repair	proteins	Nse5	and	Nse6
PH_BEACH	PF14844.1	gi|332796415|ref|YP_004457915.1|	-	2	8.2	5.3	0.75	9.6	0.5	2.0	2	0	0	2	2	2	0	PH	domain	associated	with	Beige/BEACH
BRF1	PF07741.8	gi|332796415|ref|YP_004457915.1|	-	6.3	7.1	20.0	0.084	13.1	6.4	2.0	1	1	1	2	2	2	0	Brf1-like	TBP-binding	domain
AAA_10	PF12846.2	gi|332796416|ref|YP_004457916.1|	-	1.7e-25	90.0	0.4	2.6e-25	89.4	0.3	1.2	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|332796416|ref|YP_004457916.1|	-	2.4e-07	30.7	3.4	2.6e-06	27.4	2.3	2.5	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|332796416|ref|YP_004457916.1|	-	3.9e-05	23.8	0.0	0.15	12.2	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Pox_A32	PF04665.7	gi|332796416|ref|YP_004457916.1|	-	0.00054	19.3	0.7	0.0021	17.3	0.0	2.0	2	0	0	2	2	2	1	Poxvirus	A32	protein
FtsK_SpoIIIE	PF01580.13	gi|332796416|ref|YP_004457916.1|	-	0.0021	17.5	0.0	0.0035	16.8	0.0	1.2	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_18	PF13238.1	gi|332796416|ref|YP_004457916.1|	-	0.0022	18.3	0.1	0.018	15.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|332796416|ref|YP_004457916.1|	-	0.0027	18.5	0.0	0.0065	17.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|332796416|ref|YP_004457916.1|	-	0.0029	17.0	0.0	0.006	16.0	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Zot	PF05707.7	gi|332796416|ref|YP_004457916.1|	-	0.0042	16.5	0.1	0.022	14.2	0.0	1.9	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
TrwB_AAD_bind	PF10412.4	gi|332796416|ref|YP_004457916.1|	-	0.0063	15.1	0.0	0.43	9.1	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ABC_tran	PF00005.22	gi|332796416|ref|YP_004457916.1|	-	0.019	15.2	0.0	0.034	14.4	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
AAA_29	PF13555.1	gi|332796416|ref|YP_004457916.1|	-	0.025	14.0	0.1	0.06	12.8	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|332796416|ref|YP_004457916.1|	-	0.039	13.8	0.0	0.065	13.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
TraG-D_C	PF12696.2	gi|332796416|ref|YP_004457916.1|	-	0.062	13.1	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	TraM	recognition	site	of	TraD	and	TraG
Hpr_kinase_C	PF07475.7	gi|332796416|ref|YP_004457916.1|	-	0.079	12.2	0.0	0.17	11.2	0.0	1.5	1	0	0	1	1	1	0	HPr	Serine	kinase	C-terminal	domain
Zeta_toxin	PF06414.7	gi|332796416|ref|YP_004457916.1|	-	0.083	11.9	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
NACHT	PF05729.7	gi|332796416|ref|YP_004457916.1|	-	0.11	12.1	0.1	0.29	10.7	0.1	1.7	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|332796416|ref|YP_004457916.1|	-	0.13	11.1	0.0	0.25	10.2	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
CobU	PF02283.11	gi|332796416|ref|YP_004457916.1|	-	0.18	11.2	0.0	0.32	10.3	0.0	1.4	1	0	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA_19	PF13245.1	gi|332796416|ref|YP_004457916.1|	-	0.21	11.3	0.0	0.45	10.2	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
SLAC1	PF03595.12	gi|332796416|ref|YP_004457916.1|	-	2.2	6.8	21.5	0.94	8.0	7.4	2.1	1	1	1	2	2	2	0	Voltage-dependent	anion	channel
DEAD	PF00270.24	gi|332796417|ref|YP_004457917.1|	-	3.1e-34	117.9	0.4	1.5e-31	109.2	0.0	3.2	3	1	0	3	3	3	2	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|332796417|ref|YP_004457917.1|	-	4.6e-23	81.9	0.0	1e-22	80.7	0.0	1.6	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|332796417|ref|YP_004457917.1|	-	7e-18	64.2	0.1	1.1e-14	54.0	0.1	2.7	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332796417|ref|YP_004457917.1|	-	0.022	14.6	0.0	0.053	13.3	0.0	1.7	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
SecA_DEAD	PF07517.9	gi|332796417|ref|YP_004457917.1|	-	0.052	12.8	0.0	0.1	11.8	0.0	1.5	1	0	0	1	1	1	0	SecA	DEAD-like	domain
zinc_ribbon_6	PF14599.1	gi|332796417|ref|YP_004457917.1|	-	0.1	12.4	0.1	0.34	10.7	0.1	1.8	1	0	0	1	1	1	0	Zinc-ribbon
KOW	PF00467.24	gi|332796418|ref|YP_004457918.1|	-	3.1e-05	23.4	2.4	3.1e-05	23.4	1.6	1.8	2	0	0	2	2	2	1	KOW	motif
Ribosomal_L14e	PF01929.12	gi|332796418|ref|YP_004457918.1|	-	0.0028	17.9	0.1	0.0041	17.4	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L14
XisI	PF08869.6	gi|332796418|ref|YP_004457918.1|	-	0.014	15.4	0.1	0.017	15.2	0.0	1.1	1	0	0	1	1	1	0	XisI	protein
DKCLD	PF08068.7	gi|332796419|ref|YP_004457919.1|	-	3.1e-17	62.2	0.0	4e-17	61.8	0.0	1.1	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
TruB_N	PF01509.13	gi|332796419|ref|YP_004457919.1|	-	0.061	13.4	0.0	0.13	12.4	0.0	1.5	2	0	0	2	2	2	0	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
PUA	PF01472.15	gi|332796420|ref|YP_004457920.1|	-	9.9e-16	57.2	0.3	1.6e-15	56.5	0.2	1.4	1	0	0	1	1	1	1	PUA	domain
TruB_N	PF01509.13	gi|332796420|ref|YP_004457920.1|	-	0.00019	21.6	0.0	0.0028	17.8	0.0	2.1	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
MTS	PF05175.9	gi|332796421|ref|YP_004457921.1|	-	1.3e-40	138.5	0.0	1.5e-40	138.3	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|332796421|ref|YP_004457921.1|	-	4.4e-16	58.9	0.0	5.9e-16	58.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332796421|ref|YP_004457921.1|	-	9.6e-16	57.7	0.1	1.2e-15	57.4	0.1	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|332796421|ref|YP_004457921.1|	-	3.4e-12	46.1	0.1	4e-12	45.8	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.2	gi|332796421|ref|YP_004457921.1|	-	2.9e-11	43.9	0.0	4.1e-11	43.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|332796421|ref|YP_004457921.1|	-	1.1e-07	32.2	0.0	1.5e-07	31.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332796421|ref|YP_004457921.1|	-	1.3e-07	32.0	0.0	1.9e-07	31.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.10	gi|332796421|ref|YP_004457921.1|	-	2.2e-07	30.1	0.1	2.9e-07	29.8	0.1	1.2	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_16	PF10294.4	gi|332796421|ref|YP_004457921.1|	-	2.7e-07	30.1	0.1	4.1e-07	29.6	0.1	1.3	1	1	0	1	1	1	1	Putative	methyltransferase
Cons_hypoth95	PF03602.10	gi|332796421|ref|YP_004457921.1|	-	3.2e-07	29.9	0.0	3.8e-07	29.6	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
UPF0020	PF01170.13	gi|332796421|ref|YP_004457921.1|	-	6.3e-07	29.1	0.1	8.8e-07	28.6	0.0	1.3	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_15	PF09445.5	gi|332796421|ref|YP_004457921.1|	-	1.3e-06	28.1	0.2	2.7e-06	27.0	0.1	1.6	1	1	1	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.1	gi|332796421|ref|YP_004457921.1|	-	1.6e-06	28.3	0.0	2.8e-06	27.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|332796421|ref|YP_004457921.1|	-	3.2e-06	26.8	0.2	3.9e-06	26.6	0.2	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
TehB	PF03848.9	gi|332796421|ref|YP_004457921.1|	-	1.3e-05	24.4	0.3	2.4e-05	23.5	0.1	1.5	1	1	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_4	PF02390.12	gi|332796421|ref|YP_004457921.1|	-	0.00011	21.2	0.1	0.0058	15.7	0.0	2.1	2	0	0	2	2	2	1	Putative	methyltransferase
CMAS	PF02353.15	gi|332796421|ref|YP_004457921.1|	-	0.00015	20.9	0.0	0.00018	20.6	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
DUF633	PF04816.7	gi|332796421|ref|YP_004457921.1|	-	0.00044	19.6	0.1	0.00073	18.9	0.1	1.3	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF633)
Methyltransf_23	PF13489.1	gi|332796421|ref|YP_004457921.1|	-	0.00098	18.8	0.0	0.0013	18.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FmrO	PF07091.6	gi|332796421|ref|YP_004457921.1|	-	0.0022	17.0	0.0	0.0031	16.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
rRNA_methylase	PF06962.7	gi|332796421|ref|YP_004457921.1|	-	0.004	16.8	0.1	2.2	7.9	0.0	2.2	2	0	0	2	2	2	2	Putative	rRNA	methylase
Methyltransf_32	PF13679.1	gi|332796421|ref|YP_004457921.1|	-	0.0041	16.8	0.0	0.006	16.2	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|332796421|ref|YP_004457921.1|	-	0.013	14.5	0.0	0.017	14.1	0.0	1.2	1	0	0	1	1	1	0	N-6	DNA	Methylase
Methyltransf_24	PF13578.1	gi|332796421|ref|YP_004457921.1|	-	0.017	15.9	0.0	0.026	15.3	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|332796421|ref|YP_004457921.1|	-	0.029	13.6	0.0	0.1	11.8	0.0	1.7	1	1	1	2	2	2	0	MraW	methylase	family
Methyltransf_10	PF05971.7	gi|332796421|ref|YP_004457921.1|	-	0.038	13.1	0.0	0.052	12.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF890)
PCMT	PF01135.14	gi|332796421|ref|YP_004457921.1|	-	0.047	13.2	0.2	0.11	11.9	0.1	1.5	1	1	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
tRNA_U5-meth_tr	PF05958.6	gi|332796421|ref|YP_004457921.1|	-	0.065	11.9	0.1	0.11	11.1	0.0	1.3	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Dam	PF05869.6	gi|332796421|ref|YP_004457921.1|	-	0.068	12.6	0.0	0.079	12.3	0.0	1.2	1	0	0	1	1	1	0	DNA	N-6-adenine-methyltransferase	(Dam)
Ribosomal_S10	PF00338.17	gi|332796423|ref|YP_004457923.1|	-	9.9e-31	105.4	0.1	1.1e-30	105.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
MetJ	PF01340.15	gi|332796423|ref|YP_004457923.1|	-	0.058	13.1	0.0	0.092	12.4	0.0	1.3	1	0	0	1	1	1	0	Met	Apo-repressor,	MetJ
GTP_EFTU	PF00009.22	gi|332796424|ref|YP_004457924.1|	-	1.8e-51	174.2	0.1	2.3e-51	173.9	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|332796424|ref|YP_004457924.1|	-	9.3e-34	115.5	0.0	2.4e-33	114.2	0.0	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|332796424|ref|YP_004457924.1|	-	9.3e-19	67.3	4.5	2e-17	63.0	1.8	2.8	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|332796424|ref|YP_004457924.1|	-	1.5e-05	24.9	0.1	4e-05	23.5	0.1	1.6	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|332796424|ref|YP_004457924.1|	-	0.00083	19.8	0.5	0.017	15.6	0.2	2.8	1	1	1	2	2	2	1	Miro-like	protein
GTP_EFTU_D4	PF14578.1	gi|332796424|ref|YP_004457924.1|	-	0.0023	17.5	1.9	0.0062	16.1	1.3	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
Septin	PF00735.13	gi|332796424|ref|YP_004457924.1|	-	0.0038	16.2	0.0	0.014	14.3	0.0	1.8	1	1	0	1	1	1	1	Septin
SRPRB	PF09439.5	gi|332796424|ref|YP_004457924.1|	-	0.009	15.2	0.0	1.2	8.3	0.0	2.2	1	1	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Dynamin_N	PF00350.18	gi|332796424|ref|YP_004457924.1|	-	0.031	14.0	0.1	2.1	8.1	0.0	2.4	1	1	1	2	2	2	0	Dynamin	family
TetR_C_2	PF08361.6	gi|332796424|ref|YP_004457924.1|	-	0.13	12.1	0.0	0.25	11.2	0.0	1.4	1	0	0	1	1	1	0	MAATS-type	transcriptional	repressor,	C-terminal	region
Ribosomal_S7	PF00177.16	gi|332796425|ref|YP_004457925.1|	-	5.6e-48	162.2	0.1	6.5e-48	162.0	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DNase-RNase	PF02577.9	gi|332796426|ref|YP_004457926.1|	-	8.5e-10	37.9	0.3	1.1e-09	37.6	0.2	1.2	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosom_S12_S23	PF00164.20	gi|332796427|ref|YP_004457927.1|	-	3.3e-41	139.5	0.2	3.8e-41	139.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.12	gi|332796428|ref|YP_004457928.1|	-	2.6e-18	65.3	2.8	5.1e-13	48.3	0.1	2.1	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|332796428|ref|YP_004457928.1|	-	8.5e-13	47.9	2.6	1.5e-12	47.1	0.2	2.2	2	1	0	2	2	2	1	NusA-like	KH	domain
KH_4	PF13083.1	gi|332796428|ref|YP_004457928.1|	-	3.8e-12	45.6	0.3	6.5e-07	28.9	0.0	2.2	2	0	0	2	2	2	2	KH	domain
KH_1	PF00013.24	gi|332796428|ref|YP_004457928.1|	-	2.1e-07	30.4	1.0	0.00022	20.8	0.0	2.3	2	0	0	2	2	2	2	KH	domain
DUF1805	PF08827.6	gi|332796428|ref|YP_004457928.1|	-	0.075	12.8	0.1	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1805)
Ribosomal_L7Ae	PF01248.21	gi|332796429|ref|YP_004457929.1|	-	3.1e-18	65.0	0.0	3.8e-18	64.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
eRF1_3	PF03465.10	gi|332796429|ref|YP_004457929.1|	-	0.06	13.6	0.0	0.06	13.6	0.0	1.1	1	0	0	1	1	1	0	eRF1	domain	3
RNA_pol_Rpb1_5	PF04998.12	gi|332796430|ref|YP_004457930.1|	-	3.2e-53	180.7	2.0	4.1e-53	180.4	1.4	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_7	PF04990.7	gi|332796430|ref|YP_004457930.1|	-	0.05	13.3	1.6	0.45	10.2	0.1	2.3	2	0	0	2	2	2	0	RNA	polymerase	Rpb1,	domain	7
DUF1002	PF06207.6	gi|332796430|ref|YP_004457930.1|	-	0.55	9.5	4.9	0.64	9.2	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1002)
RNA_pol_Rpb1_1	PF04997.7	gi|332796431|ref|YP_004457931.1|	-	1.2e-90	304.2	0.7	2.2e-89	300.0	0.1	2.4	2	1	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|332796431|ref|YP_004457931.1|	-	7.1e-70	234.2	0.0	1.5e-69	233.2	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|332796431|ref|YP_004457931.1|	-	1.4e-38	132.1	0.0	2.6e-38	131.2	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|332796431|ref|YP_004457931.1|	-	7.7e-33	112.4	0.0	1.7e-32	111.4	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|332796431|ref|YP_004457931.1|	-	2e-26	92.9	0.4	3.8e-26	91.9	0.1	1.6	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	5
zf-ribbon_3	PF13248.1	gi|332796431|ref|YP_004457931.1|	-	0.00014	20.9	0.0	0.0068	15.5	0.0	2.7	2	1	0	2	2	2	1	zinc-ribbon	domain
CpXC	PF14353.1	gi|332796431|ref|YP_004457931.1|	-	0.07	13.0	1.8	0.49	10.3	0.0	2.6	1	1	1	2	2	2	0	CpXC	protein
Zn_Tnp_IS1595	PF12760.2	gi|332796431|ref|YP_004457931.1|	-	0.13	12.0	5.8	0.51	10.1	0.0	3.0	3	0	0	3	3	3	0	Transposase	zinc-ribbon	domain
HypA	PF01155.14	gi|332796431|ref|YP_004457931.1|	-	0.23	11.1	2.4	1.5	8.5	0.1	2.8	3	0	0	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_2	PF13240.1	gi|332796431|ref|YP_004457931.1|	-	0.46	10.0	5.8	2.7	7.6	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
TerY-C	PF15616.1	gi|332796431|ref|YP_004457931.1|	-	0.47	10.3	1.8	3.5	7.5	0.0	2.4	2	0	0	2	2	2	0	TerY-C	metal	binding	domain
Zn-ribbon_8	PF09723.5	gi|332796431|ref|YP_004457931.1|	-	0.47	10.4	3.2	6.7	6.7	0.1	3.1	3	0	0	3	3	3	0	Zinc	ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|332796431|ref|YP_004457931.1|	-	0.99	9.1	7.0	12	5.6	0.3	3.4	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ISL3	PF14690.1	gi|332796431|ref|YP_004457931.1|	-	2.9	7.9	10.2	1.6	8.8	0.3	3.4	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF35_N	PF12172.3	gi|332796431|ref|YP_004457931.1|	-	6.2	6.8	6.4	33	4.5	0.0	3.3	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Nudix_N_2	PF14803.1	gi|332796431|ref|YP_004457931.1|	-	8.8	6.1	7.0	16	5.3	0.2	3.3	3	0	0	3	3	3	0	Nudix	N-terminal
RNA_pol_Rpb2_6	PF00562.23	gi|332796432|ref|YP_004457932.1|	-	1.5e-125	418.9	0.0	2.2e-125	418.4	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|332796432|ref|YP_004457932.1|	-	5.9e-64	214.7	0.0	1e-63	213.9	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|332796432|ref|YP_004457932.1|	-	1.9e-39	135.0	0.0	4.4e-39	133.8	0.0	1.6	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.15	gi|332796432|ref|YP_004457932.1|	-	5.4e-29	100.2	0.0	1.1e-28	99.2	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|332796432|ref|YP_004457932.1|	-	4.3e-26	90.4	0.0	1.5e-25	88.6	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.8	gi|332796432|ref|YP_004457932.1|	-	4.7e-17	61.5	0.6	1.1e-16	60.3	0.4	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|332796432|ref|YP_004457932.1|	-	7.2e-14	51.5	0.8	2e-13	50.0	0.6	1.8	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
DUF2082	PF09855.4	gi|332796432|ref|YP_004457932.1|	-	0.034	13.9	0.3	4.8	7.0	0.2	2.9	3	0	0	3	3	3	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
RNA_pol_Rpb5_C	PF01191.14	gi|332796433|ref|YP_004457933.1|	-	1e-30	105.1	0.2	1.2e-30	104.9	0.1	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
Malic_M	PF03949.10	gi|332796434|ref|YP_004457934.1|	-	1e-63	215.3	0.1	1.3e-63	214.9	0.0	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|332796434|ref|YP_004457934.1|	-	3.4e-28	98.4	0.1	2.6e-19	69.5	0.1	2.6	1	1	1	2	2	2	2	Malic	enzyme,	N-terminal	domain
GTP_EFTU	PF00009.22	gi|332796435|ref|YP_004457935.1|	-	6.7e-32	110.4	0.0	2.8e-31	108.4	0.0	2.0	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.1	gi|332796435|ref|YP_004457935.1|	-	3.6e-25	87.4	1.8	1.2e-24	85.7	1.3	2.0	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.3	gi|332796435|ref|YP_004457935.1|	-	8.9e-17	60.9	1.8	8.9e-17	60.9	1.3	1.9	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|332796435|ref|YP_004457935.1|	-	2.2e-10	40.4	6.9	4.7e-10	39.4	0.0	3.4	4	0	0	4	4	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|332796435|ref|YP_004457935.1|	-	7.1e-07	29.1	0.4	2.4e-06	27.4	0.0	2.1	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|332796435|ref|YP_004457935.1|	-	3.1e-05	24.4	0.0	0.00011	22.6	0.0	2.0	2	0	0	2	2	2	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|332796435|ref|YP_004457935.1|	-	0.0036	17.1	0.7	0.14	11.9	0.0	3.2	4	0	0	4	4	4	1	Dynamin	family
PduV-EutP	PF10662.4	gi|332796435|ref|YP_004457935.1|	-	0.0071	15.8	0.3	0.65	9.4	0.0	3.2	3	1	0	3	3	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
Ras	PF00071.17	gi|332796435|ref|YP_004457935.1|	-	0.0089	15.4	0.0	0.045	13.1	0.0	2.1	1	1	0	1	1	1	1	Ras	family
Arf	PF00025.16	gi|332796435|ref|YP_004457935.1|	-	0.013	14.7	0.1	5.8	6.1	0.0	2.9	2	1	0	2	2	2	0	ADP-ribosylation	factor	family
STAS	PF01740.16	gi|332796435|ref|YP_004457935.1|	-	0.019	14.4	0.0	0.14	11.5	0.0	2.3	2	0	0	2	2	2	0	STAS	domain
MobB	PF03205.9	gi|332796435|ref|YP_004457935.1|	-	0.031	13.9	0.2	0.61	9.7	0.1	2.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF367	PF04034.8	gi|332796435|ref|YP_004457935.1|	-	0.047	13.3	0.0	0.13	11.8	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF367)
Anti-adapt_IraP	PF10796.4	gi|332796435|ref|YP_004457935.1|	-	0.11	12.9	0.5	0.71	10.2	0.0	2.6	3	0	0	3	3	2	0	Sigma-S	stabilisation	anti-adaptor	protein
AAA_23	PF13476.1	gi|332796435|ref|YP_004457935.1|	-	0.18	12.1	2.0	3.8	7.7	1.4	3.0	1	1	0	1	1	1	0	AAA	domain
SRPRB	PF09439.5	gi|332796435|ref|YP_004457935.1|	-	1.6	7.8	4.7	0.72	9.0	0.1	2.8	3	1	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
NDK	PF00334.14	gi|332796436|ref|YP_004457936.1|	-	4.7e-58	194.7	0.1	5.3e-58	194.6	0.1	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
DUF4425	PF14466.1	gi|332796436|ref|YP_004457936.1|	-	0.049	13.7	0.0	0.08	13.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4425)
Ribosomal_L24e	PF01246.15	gi|332796437|ref|YP_004457937.1|	-	4.1e-22	77.8	1.1	4.3e-22	77.7	0.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|332796437|ref|YP_004457937.1|	-	1.8e-06	27.5	1.2	2.6e-06	26.9	0.9	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF581	PF04570.9	gi|332796437|ref|YP_004457937.1|	-	0.00034	19.8	1.3	0.00063	18.9	0.9	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF581)
zf-MYND	PF01753.13	gi|332796437|ref|YP_004457937.1|	-	0.00097	18.9	0.0	0.0018	18.0	0.0	1.5	1	1	0	1	1	1	1	MYND	finger
DUF2175	PF09943.4	gi|332796437|ref|YP_004457937.1|	-	0.0062	16.5	0.4	0.0062	16.5	0.3	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-C4_ClpX	PF06689.8	gi|332796437|ref|YP_004457937.1|	-	0.015	14.8	0.5	0.018	14.5	0.0	1.5	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
CpXC	PF14353.1	gi|332796437|ref|YP_004457937.1|	-	0.051	13.5	0.1	0.059	13.3	0.1	1.1	1	0	0	1	1	1	0	CpXC	protein
Arc_trans_TRASH	PF08394.5	gi|332796437|ref|YP_004457937.1|	-	0.059	13.5	1.1	0.13	12.4	0.8	1.6	1	1	0	1	1	1	0	Archaeal	TRASH	domain
YHS	PF04945.8	gi|332796437|ref|YP_004457937.1|	-	0.064	13.1	0.6	0.082	12.7	0.4	1.3	1	0	0	1	1	1	0	YHS	domain
DUF2116	PF09889.4	gi|332796437|ref|YP_004457937.1|	-	0.07	12.9	1.9	1.4	8.7	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Baculo_RING	PF05883.6	gi|332796437|ref|YP_004457937.1|	-	0.12	12.2	0.1	0.13	12.1	0.0	1.1	1	0	0	1	1	1	0	Baculovirus	U-box/Ring-like	domain
zinc_ribbon_2	PF13240.1	gi|332796437|ref|YP_004457937.1|	-	0.22	11.0	0.3	0.22	11.0	0.2	1.9	2	1	0	1	1	1	0	zinc-ribbon	domain
DUF329	PF03884.9	gi|332796437|ref|YP_004457937.1|	-	0.29	10.7	3.8	2.8	7.5	2.6	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
zf-HIT	PF04438.11	gi|332796437|ref|YP_004457937.1|	-	2.3	7.9	6.5	64	3.3	4.5	2.2	1	1	0	1	1	1	0	HIT	zinc	finger
Ribosomal_S28e	PF01200.13	gi|332796438|ref|YP_004457938.1|	-	7.2e-31	105.7	2.4	8e-31	105.5	1.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.24	gi|332796438|ref|YP_004457938.1|	-	0.012	15.2	0.7	0.59	9.9	0.1	2.9	2	1	0	2	2	2	0	KOW	motif
UPRTase	PF14681.1	gi|332796439|ref|YP_004457939.1|	-	1.6e-51	174.4	0.0	1.9e-51	174.2	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|332796439|ref|YP_004457939.1|	-	2.4e-07	30.5	0.2	4.2e-07	29.7	0.1	1.4	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
DUF3402	PF11882.3	gi|332796439|ref|YP_004457939.1|	-	0.093	11.7	0.0	0.096	11.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3402)
T2SS-T3SS_pil_N	PF13629.1	gi|332796439|ref|YP_004457939.1|	-	0.12	11.9	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Pilus	formation	protein	N	terminal	region
PRTase_2	PF15609.1	gi|332796439|ref|YP_004457939.1|	-	0.12	11.6	0.0	0.37	10.0	0.0	1.6	1	1	0	1	1	1	0	Phosphoribosyl	transferase
dCMP_cyt_deam_1	PF00383.17	gi|332796440|ref|YP_004457940.1|	-	2.6e-20	71.9	0.1	3.4e-20	71.5	0.1	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
dCMP_cyt_deam_2	PF08211.6	gi|332796440|ref|YP_004457940.1|	-	2.4e-13	50.1	0.0	4.3e-13	49.3	0.0	1.3	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
LmjF365940-deam	PF14421.1	gi|332796440|ref|YP_004457940.1|	-	0.00015	21.2	0.3	0.08	12.3	0.0	2.1	1	1	1	2	2	2	2	A	distinct	subfamily	of	CDD/CDA-like	deaminases
DNA_gyraseA_C	PF03989.8	gi|332796440|ref|YP_004457940.1|	-	0.027	13.7	0.2	3.2	7.1	0.0	2.9	3	0	0	3	3	3	0	DNA	gyrase	C-terminal	domain,	beta-propeller
MafB19-deam	PF14437.1	gi|332796440|ref|YP_004457940.1|	-	0.1	12.2	0.5	4.4	6.9	0.0	2.1	1	1	1	2	2	2	0	MafB19-like	deaminase
YwqJ-deaminase	PF14431.1	gi|332796440|ref|YP_004457940.1|	-	0.13	12.1	0.3	0.89	9.4	0.1	2.0	1	1	1	2	2	2	0	YwqJ-like	deaminase
GatB_N	PF02934.10	gi|332796441|ref|YP_004457941.1|	-	1.8e-109	365.0	0.0	2.5e-109	364.6	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|332796441|ref|YP_004457941.1|	-	7.3e-43	145.8	6.0	1.7e-42	144.6	4.1	1.6	1	0	0	1	1	1	1	GatB	domain
AcylCoA_dehyd_C	PF12186.3	gi|332796441|ref|YP_004457941.1|	-	0.035	13.9	0.1	0.1	12.4	0.1	1.8	1	0	0	1	1	1	0	Acyl-CoA	dehydrogenase	C	terminal
DUF87	PF01935.12	gi|332796441|ref|YP_004457941.1|	-	0.055	13.2	2.0	0.098	12.4	0.7	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	DUF87
Pribosyltran	PF00156.22	gi|332796442|ref|YP_004457942.1|	-	2.1e-23	82.4	0.9	3.3e-23	81.7	0.4	1.5	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|332796442|ref|YP_004457942.1|	-	0.00034	19.8	0.0	0.00056	19.1	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|332796442|ref|YP_004457942.1|	-	0.097	11.9	0.0	0.14	11.4	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Pribosyl_synth	PF14572.1	gi|332796442|ref|YP_004457942.1|	-	0.15	11.8	1.5	7.2	6.3	0.2	2.9	3	0	0	3	3	3	0	Phosphoribosyl	synthetase-associated	domain
YcxB	PF14317.1	gi|332796443|ref|YP_004457943.1|	-	0.027	13.7	0.6	0.47	9.7	0.1	2.4	2	0	0	2	2	2	0	YcxB-like	protein
RibD_C	PF01872.12	gi|332796444|ref|YP_004457944.1|	-	5.9e-44	150.0	0.0	6.6e-44	149.9	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
PcrB	PF01884.12	gi|332796444|ref|YP_004457944.1|	-	0.039	13.1	0.2	0.061	12.5	0.1	1.4	1	1	0	1	1	1	0	PcrB	family
Radical_SAM	PF04055.16	gi|332796445|ref|YP_004457945.1|	-	1.6e-17	64.1	3.8	2.9e-17	63.3	0.0	2.8	3	0	0	3	3	3	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|332796445|ref|YP_004457945.1|	-	4e-08	33.3	1.3	6.7e-08	32.5	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|332796445|ref|YP_004457945.1|	-	1.4e-06	28.5	0.9	4.1e-06	26.9	0.6	1.8	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Peptidase_S13	PF02113.10	gi|332796445|ref|YP_004457945.1|	-	0.053	12.0	0.0	0.2	10.1	0.0	1.8	2	0	0	2	2	2	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
AIRS	PF00586.19	gi|332796446|ref|YP_004457946.1|	-	1.2e-12	47.8	0.0	2.6e-12	46.8	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|332796446|ref|YP_004457946.1|	-	0.00024	21.1	0.0	0.00037	20.5	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
HHH_5	PF14520.1	gi|332796446|ref|YP_004457946.1|	-	0.034	14.3	0.0	0.23	11.6	0.0	2.1	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
Rep_fac_C	PF08542.6	gi|332796446|ref|YP_004457946.1|	-	0.093	12.7	0.0	10	6.1	0.0	2.4	2	0	0	2	2	2	0	Replication	factor	C	C-terminal	domain
Lyase_1	PF00206.15	gi|332796447|ref|YP_004457947.1|	-	1.8e-50	171.9	0.0	2.6e-50	171.4	0.0	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|332796447|ref|YP_004457947.1|	-	7.1e-18	64.3	0.1	2e-17	62.9	0.0	1.8	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminus
ASL_C2	PF14698.1	gi|332796447|ref|YP_004457947.1|	-	0.013	15.5	0.0	0.079	13.0	0.0	2.3	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
FumaraseC_C	PF10415.4	gi|332796447|ref|YP_004457947.1|	-	0.072	13.1	0.0	0.65	10.1	0.0	2.7	2	0	0	2	2	2	0	Fumarase	C	C-terminus
DUF1297	PF06973.7	gi|332796448|ref|YP_004457948.1|	-	3.2e-73	245.0	0.1	4.6e-73	244.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|332796448|ref|YP_004457948.1|	-	5.3e-42	142.5	0.1	8.6e-42	141.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
GARS_A	PF01071.14	gi|332796448|ref|YP_004457948.1|	-	0.0027	17.3	0.0	0.0049	16.4	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_3	PF02655.9	gi|332796448|ref|YP_004457948.1|	-	0.0038	17.1	0.1	0.0076	16.1	0.1	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|332796448|ref|YP_004457948.1|	-	0.02	14.1	0.0	0.037	13.2	0.0	1.4	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_4	PF13535.1	gi|332796448|ref|YP_004457948.1|	-	0.15	11.7	0.0	0.66	9.6	0.0	1.9	1	1	0	1	1	1	0	ATP-grasp	domain
DUF1297	PF06973.7	gi|332796449|ref|YP_004457949.1|	-	3.1e-76	254.9	0.0	4e-76	254.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|332796449|ref|YP_004457949.1|	-	3.5e-48	162.4	0.0	5.7e-48	161.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|332796449|ref|YP_004457949.1|	-	1.6e-07	31.2	0.0	4.1e-06	26.6	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
ABC_membrane_2	PF06472.10	gi|332796449|ref|YP_004457949.1|	-	0.069	12.2	0.0	0.1	11.6	0.0	1.2	1	0	0	1	1	1	0	ABC	transporter	transmembrane	region	2
Adenylsucc_synt	PF00709.16	gi|332796450|ref|YP_004457950.1|	-	3.1e-75	253.4	0.3	8.3e-39	133.4	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
DAO	PF01266.19	gi|332796451|ref|YP_004457951.1|	-	1.9e-14	53.3	0.0	1.5e-06	27.4	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332796451|ref|YP_004457951.1|	-	5.1e-12	46.1	1.3	2e-06	27.8	0.0	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332796451|ref|YP_004457951.1|	-	7.5e-11	41.1	0.0	5.2e-05	21.9	0.0	2.2	2	0	0	2	2	2	2	HI0933-like	protein
GIDA	PF01134.17	gi|332796451|ref|YP_004457951.1|	-	7.2e-08	31.6	0.2	0.0021	17.0	0.0	2.3	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|332796451|ref|YP_004457951.1|	-	3.1e-06	27.4	0.0	0.023	14.7	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|332796451|ref|YP_004457951.1|	-	1.2e-05	25.2	0.1	9.6e-05	22.3	0.1	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|332796451|ref|YP_004457951.1|	-	8.6e-05	21.5	1.0	0.00044	19.2	0.1	2.4	3	0	0	3	3	3	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|332796451|ref|YP_004457951.1|	-	0.00032	19.7	0.0	0.0039	16.1	0.0	2.0	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|332796451|ref|YP_004457951.1|	-	0.00033	19.4	0.1	0.0012	17.5	0.0	1.8	2	0	0	2	2	2	1	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|332796451|ref|YP_004457951.1|	-	0.00053	19.7	0.0	0.0025	17.5	0.0	1.9	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Thi4	PF01946.12	gi|332796451|ref|YP_004457951.1|	-	0.00055	19.1	0.5	0.002	17.3	0.1	2.0	2	0	0	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.14	gi|332796451|ref|YP_004457951.1|	-	0.0016	17.5	0.0	0.0029	16.7	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|332796451|ref|YP_004457951.1|	-	0.013	15.9	0.8	7.6	7.0	0.1	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|332796451|ref|YP_004457951.1|	-	0.053	12.5	0.2	0.087	11.8	0.1	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
HTH_AsnC-type	PF13404.1	gi|332796452|ref|YP_004457952.1|	-	1.4e-10	40.5	0.0	1.9e-07	30.4	0.0	2.7	2	1	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|332796452|ref|YP_004457952.1|	-	2.1e-05	23.8	3.3	0.16	11.3	0.1	3.7	4	0	0	4	4	4	2	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.1	gi|332796452|ref|YP_004457952.1|	-	0.00036	20.5	0.0	0.16	12.1	0.0	2.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
DDRGK	PF09756.4	gi|332796452|ref|YP_004457952.1|	-	0.0017	17.7	0.3	1.6	8.1	0.0	2.4	2	0	0	2	2	2	2	DDRGK	domain
DUF2805	PF10985.3	gi|332796452|ref|YP_004457952.1|	-	0.0052	16.6	0.2	1.6	8.7	0.1	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2805)
HTH_28	PF13518.1	gi|332796452|ref|YP_004457952.1|	-	0.0098	15.8	0.0	18	5.4	0.0	3.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|332796452|ref|YP_004457952.1|	-	0.063	13.6	0.0	2.8	8.3	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|332796452|ref|YP_004457952.1|	-	0.071	12.8	0.1	2.5	7.8	0.0	3.0	3	0	0	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_19	PF12844.2	gi|332796452|ref|YP_004457952.1|	-	0.21	11.6	1.4	8.5	6.5	0.4	3.4	2	1	0	2	2	2	0	Helix-turn-helix	domain
IF2_N	PF04760.10	gi|332796452|ref|YP_004457952.1|	-	7	6.4	8.0	7.6	6.2	1.4	3.7	3	1	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
PDT	PF00800.13	gi|332796453|ref|YP_004457953.1|	-	1.7e-33	115.7	0.1	2.2e-33	115.3	0.0	1.2	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.20	gi|332796453|ref|YP_004457953.1|	-	0.0012	18.2	0.0	0.0033	16.8	0.0	1.8	2	0	0	2	2	2	1	ACT	domain
PALP	PF00291.20	gi|332796454|ref|YP_004457954.1|	-	2.2e-79	266.8	0.1	2.7e-79	266.5	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT_4	PF13291.1	gi|332796454|ref|YP_004457954.1|	-	0.0074	16.6	1.2	0.021	15.1	0.1	2.3	2	0	0	2	2	2	1	ACT	domain
ACT	PF01842.20	gi|332796454|ref|YP_004457954.1|	-	0.016	14.6	0.4	0.063	12.7	0.0	2.2	2	0	0	2	2	2	0	ACT	domain
ACT_6	PF13740.1	gi|332796454|ref|YP_004457954.1|	-	0.03	14.0	0.0	0.073	12.7	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
HIT	PF01230.18	gi|332796455|ref|YP_004457955.1|	-	7.5e-15	55.2	0.0	1.1e-14	54.7	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|332796455|ref|YP_004457955.1|	-	8.4e-08	32.4	0.0	1.6e-07	31.5	0.0	1.4	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|332796455|ref|YP_004457955.1|	-	1.1e-07	31.5	0.3	2.4e-07	30.4	0.2	1.6	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
tRNA-Thr_ED	PF08915.6	gi|332796455|ref|YP_004457955.1|	-	0.079	12.9	0.1	0.15	12.0	0.0	1.4	2	0	0	2	2	2	0	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
Rad51	PF08423.6	gi|332796456|ref|YP_004457956.1|	-	4.3e-91	304.3	0.1	5.1e-91	304.1	0.1	1.0	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|332796456|ref|YP_004457956.1|	-	1.6e-13	50.5	0.0	2.5e-13	49.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|332796456|ref|YP_004457956.1|	-	1.7e-13	50.3	0.1	2.4e-13	49.8	0.1	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|332796456|ref|YP_004457956.1|	-	3.3e-08	32.9	0.0	6e-08	32.0	0.0	1.4	1	0	0	1	1	1	1	KaiC
HHH_5	PF14520.1	gi|332796456|ref|YP_004457956.1|	-	1.7e-06	28.1	0.4	4.1e-06	26.8	0.1	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
AAA_18	PF13238.1	gi|332796456|ref|YP_004457956.1|	-	0.056	13.7	0.0	0.13	12.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
UPF0113	PF03657.8	gi|332796457|ref|YP_004457957.1|	-	0.0034	17.0	1.0	0.0044	16.6	0.7	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Nol1_Nop2_Fmu	PF01189.12	gi|332796458|ref|YP_004457958.1|	-	1.2e-53	182.3	0.0	1.5e-53	182.0	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|332796458|ref|YP_004457958.1|	-	5.9e-10	38.9	0.0	9.2e-10	38.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|332796458|ref|YP_004457958.1|	-	8.2e-06	25.9	0.0	1.4e-05	25.1	0.0	1.4	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_26	PF13659.1	gi|332796458|ref|YP_004457958.1|	-	0.00018	21.4	0.0	0.00026	21.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|332796458|ref|YP_004457958.1|	-	0.00055	19.0	0.0	0.0048	15.9	0.0	2.3	3	0	0	3	3	3	1	Putative	methyltransferase
PCMT	PF01135.14	gi|332796458|ref|YP_004457958.1|	-	0.00056	19.5	0.0	0.00095	18.7	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|332796458|ref|YP_004457958.1|	-	0.0038	16.6	0.0	0.0064	15.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|332796458|ref|YP_004457958.1|	-	0.0044	17.5	0.0	0.0068	16.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|332796458|ref|YP_004457958.1|	-	0.073	12.0	0.0	0.12	11.3	0.0	1.4	1	1	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Cons_hypoth95	PF03602.10	gi|332796458|ref|YP_004457958.1|	-	0.074	12.4	0.0	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Ubie_methyltran	PF01209.13	gi|332796458|ref|YP_004457958.1|	-	0.11	11.5	0.0	0.98	8.4	0.0	2.2	3	0	0	3	3	3	0	ubiE/COQ5	methyltransferase	family
CYTH	PF01928.16	gi|332796459|ref|YP_004457959.1|	-	1.7e-32	112.5	1.9	2.2e-32	112.2	1.3	1.0	1	0	0	1	1	1	1	CYTH	domain
SAM_adeno_trans	PF01887.11	gi|332796460|ref|YP_004457960.1|	-	9.2e-67	224.7	0.1	1e-66	224.6	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
CTP_transf_2	PF01467.21	gi|332796461|ref|YP_004457961.1|	-	1.7e-21	76.8	0.0	2.3e-21	76.4	0.0	1.1	1	0	0	1	1	1	1	Cytidylyltransferase
FlpD	PF02662.11	gi|332796461|ref|YP_004457961.1|	-	0.059	13.0	0.0	0.099	12.3	0.0	1.2	1	0	0	1	1	1	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Citrate_ly_lig	PF08218.6	gi|332796461|ref|YP_004457961.1|	-	0.1	12.0	0.0	1.1	8.6	0.0	2.1	2	0	0	2	2	2	0	Citrate	lyase	ligase	C-terminal	domain
4HBT	PF03061.17	gi|332796462|ref|YP_004457962.1|	-	7.1e-24	83.7	0.0	4.7e-12	45.8	0.0	2.2	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|332796462|ref|YP_004457962.1|	-	0.0018	18.7	0.0	1.6	9.1	0.0	2.1	1	1	0	2	2	2	2	Thioesterase-like	superfamily
DUF99	PF01949.11	gi|332796463|ref|YP_004457963.1|	-	3.4e-23	81.7	0.1	4.3e-23	81.3	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Cdc6_C	PF09079.6	gi|332796464|ref|YP_004457964.1|	-	2.9e-23	81.3	0.8	1e-22	79.6	0.6	2.0	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|332796464|ref|YP_004457964.1|	-	1.7e-14	54.0	0.0	6.2e-14	52.2	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|332796464|ref|YP_004457964.1|	-	6.5e-11	42.5	0.0	2.1e-10	40.8	0.0	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|332796464|ref|YP_004457964.1|	-	2.1e-10	40.8	0.1	6.3e-10	39.3	0.0	1.8	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|332796464|ref|YP_004457964.1|	-	3.1e-07	29.5	0.0	4.8e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
Arch_ATPase	PF01637.13	gi|332796464|ref|YP_004457964.1|	-	4.3e-07	29.8	3.0	1.4e-06	28.1	2.1	1.9	1	1	0	1	1	1	1	Archaeal	ATPase
PIF1	PF05970.9	gi|332796464|ref|YP_004457964.1|	-	2.6e-05	23.3	0.0	4.4e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	PIF1-like	helicase
DUF815	PF05673.8	gi|332796464|ref|YP_004457964.1|	-	3.1e-05	23.0	0.0	5.9e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.13	gi|332796464|ref|YP_004457964.1|	-	0.00019	21.1	1.4	0.0011	18.6	1.0	2.1	1	1	0	1	1	1	1	Bacterial	dnaA	protein
DEAD	PF00270.24	gi|332796464|ref|YP_004457964.1|	-	0.00023	20.6	0.8	0.29	10.6	0.0	2.4	1	1	0	2	2	2	2	DEAD/DEAH	box	helicase
Sigma54_activat	PF00158.21	gi|332796464|ref|YP_004457964.1|	-	0.0013	18.1	0.0	0.0033	16.8	0.0	1.7	2	0	0	2	2	2	1	Sigma-54	interaction	domain
DUF2075	PF09848.4	gi|332796464|ref|YP_004457964.1|	-	0.0017	17.3	0.0	0.0024	16.9	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
KAP_NTPase	PF07693.9	gi|332796464|ref|YP_004457964.1|	-	0.0024	16.9	3.6	0.17	10.8	0.0	2.6	2	1	1	3	3	3	2	KAP	family	P-loop	domain
AAA_14	PF13173.1	gi|332796464|ref|YP_004457964.1|	-	0.0029	17.5	0.2	0.0061	16.4	0.1	1.6	1	0	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|332796464|ref|YP_004457964.1|	-	0.0043	16.9	0.0	0.0087	15.9	0.0	1.5	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
RuvB_N	PF05496.7	gi|332796464|ref|YP_004457964.1|	-	0.0064	15.5	0.1	0.37	9.8	0.0	2.7	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
T2SE	PF00437.15	gi|332796464|ref|YP_004457964.1|	-	0.0068	15.3	0.0	0.014	14.2	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Pox_A32	PF04665.7	gi|332796464|ref|YP_004457964.1|	-	0.0077	15.5	1.4	0.016	14.5	1.0	1.5	1	1	0	1	1	1	1	Poxvirus	A32	protein
AAA_17	PF13207.1	gi|332796464|ref|YP_004457964.1|	-	0.0079	17.0	3.8	0.036	14.8	2.6	2.4	1	1	0	1	1	1	1	AAA	domain
Torsin	PF06309.6	gi|332796464|ref|YP_004457964.1|	-	0.0099	15.7	0.0	0.025	14.4	0.0	1.7	1	0	0	1	1	1	1	Torsin
AAA_32	PF13654.1	gi|332796464|ref|YP_004457964.1|	-	0.014	14.0	1.7	0.14	10.7	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
E2F_TDP	PF02319.15	gi|332796464|ref|YP_004457964.1|	-	0.029	13.9	0.7	0.43	10.1	0.0	2.6	2	0	0	2	2	2	0	E2F/DP	family	winged-helix	DNA-binding	domain
Kinesin	PF00225.18	gi|332796464|ref|YP_004457964.1|	-	0.044	12.4	0.0	0.067	11.8	0.0	1.4	1	0	0	1	1	1	0	Kinesin	motor	domain
AAA_18	PF13238.1	gi|332796464|ref|YP_004457964.1|	-	0.045	14.0	0.2	0.22	11.8	0.1	2.3	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|332796464|ref|YP_004457964.1|	-	0.052	13.7	0.0	0.13	12.4	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
Mg_chelatase_2	PF13335.1	gi|332796464|ref|YP_004457964.1|	-	0.14	12.5	0.6	0.38	11.1	0.4	1.8	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF1743	PF08489.6	gi|332796465|ref|YP_004457965.1|	-	1.3e-37	128.1	0.0	2.3e-37	127.3	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
OrfB_Zn_ribbon	PF07282.6	gi|332796465|ref|YP_004457965.1|	-	0.0035	16.9	1.8	0.0067	16.0	1.3	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|332796465|ref|YP_004457965.1|	-	0.063	13.0	4.4	0.11	12.3	3.1	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|332796465|ref|YP_004457965.1|	-	0.079	12.9	2.6	1.3	9.0	0.5	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|332796465|ref|YP_004457965.1|	-	0.18	11.1	3.0	0.56	9.5	2.1	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|332796465|ref|YP_004457965.1|	-	0.29	10.8	4.8	6.5	6.5	0.4	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-H2C2_2	PF13465.1	gi|332796465|ref|YP_004457965.1|	-	1.3	9.4	7.9	0.21	11.9	1.0	2.4	1	1	1	2	2	2	0	Zinc-finger	double	domain
zf-C2H2_4	PF13894.1	gi|332796465|ref|YP_004457965.1|	-	3.1	8.3	6.4	19	5.8	1.4	2.8	2	1	0	2	2	2	0	C2H2-type	zinc	finger
Rad50_zn_hook	PF04423.9	gi|332796465|ref|YP_004457965.1|	-	3.5	7.1	6.5	6.5	6.3	0.1	3.6	4	0	0	4	4	4	0	Rad50	zinc	hook	motif
AsnC_trans_reg	PF01037.16	gi|332796466|ref|YP_004457966.1|	-	6.7e-19	67.3	0.2	7.8e-19	67.1	0.2	1.1	1	0	0	1	1	1	1	AsnC	family
GYD	PF08734.6	gi|332796466|ref|YP_004457966.1|	-	0.0011	18.6	0.0	0.0011	18.5	0.0	1.2	1	0	0	1	1	1	1	GYD	domain
ICE2	PF08426.5	gi|332796466|ref|YP_004457966.1|	-	0.033	12.8	0.1	0.041	12.4	0.1	1.1	1	0	0	1	1	1	0	ICE2
DUF217	PF02697.9	gi|332796466|ref|YP_004457966.1|	-	0.71	10.1	3.6	2.1	8.6	2.5	2.0	1	1	0	1	1	1	0	Uncharacterized	ACR,	COG1753
DUF367	PF04034.8	gi|332796467|ref|YP_004457967.1|	-	1.4e-42	144.2	0.1	1.6e-42	144.0	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
CBS	PF00571.23	gi|332796468|ref|YP_004457968.1|	-	6.1e-20	70.7	1.3	1.9e-11	43.5	0.2	2.2	2	0	0	2	2	2	2	CBS	domain
HTH_3	PF01381.17	gi|332796468|ref|YP_004457968.1|	-	8.1e-14	51.2	0.2	3.2e-13	49.2	0.1	2.0	1	1	1	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.2	gi|332796468|ref|YP_004457968.1|	-	8.1e-13	48.2	1.4	1.4e-12	47.4	0.3	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|332796468|ref|YP_004457968.1|	-	2.3e-10	40.5	0.0	3.3e-10	40.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|332796468|ref|YP_004457968.1|	-	0.0001	22.0	0.6	0.00024	20.8	0.0	1.9	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|332796468|ref|YP_004457968.1|	-	0.00012	21.6	0.0	0.00053	19.5	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|332796468|ref|YP_004457968.1|	-	0.00047	20.3	0.1	0.0011	19.0	0.1	1.6	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_24	PF13412.1	gi|332796468|ref|YP_004457968.1|	-	0.0055	16.0	0.0	0.021	14.1	0.0	2.1	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.11	gi|332796468|ref|YP_004457968.1|	-	0.0066	15.7	0.0	0.013	14.7	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
DUF4322	PF14210.1	gi|332796468|ref|YP_004457968.1|	-	0.007	15.8	1.0	0.013	14.9	0.2	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4322)
MarR	PF01047.17	gi|332796468|ref|YP_004457968.1|	-	0.0085	15.7	0.0	0.038	13.7	0.0	2.1	2	0	0	2	2	2	1	MarR	family
HTH_38	PF13936.1	gi|332796468|ref|YP_004457968.1|	-	0.011	15.2	0.1	0.022	14.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|332796468|ref|YP_004457968.1|	-	0.063	12.9	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_AsnC-type	PF13404.1	gi|332796468|ref|YP_004457968.1|	-	0.1	12.1	0.0	0.18	11.3	0.0	1.4	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Phage_CII	PF05269.6	gi|332796468|ref|YP_004457968.1|	-	0.11	12.5	0.0	0.19	11.7	0.0	1.5	1	0	0	1	1	1	0	Bacteriophage	CII	protein
DUF1870	PF08965.5	gi|332796468|ref|YP_004457968.1|	-	0.11	12.1	0.0	0.24	11.0	0.0	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1870)
MarR_2	PF12802.2	gi|332796468|ref|YP_004457968.1|	-	0.12	12.0	0.0	0.26	11.0	0.0	1.5	1	0	0	1	1	1	0	MarR	family
Sec61_beta	PF03911.11	gi|332796469|ref|YP_004457969.1|	-	4.9e-17	61.4	0.7	5.6e-17	61.2	0.5	1.1	1	0	0	1	1	1	1	Sec61beta	family
OppC_N	PF12911.2	gi|332796469|ref|YP_004457969.1|	-	0.61	9.5	3.8	1.1	8.6	2.7	1.4	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
PcrB	PF01884.12	gi|332796470|ref|YP_004457970.1|	-	3.2e-60	203.2	0.6	3.7e-60	203.0	0.4	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|332796470|ref|YP_004457970.1|	-	4.1e-07	29.5	0.1	7.8e-07	28.5	0.1	1.5	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
DHO_dh	PF01180.16	gi|332796470|ref|YP_004457970.1|	-	0.003	16.5	0.2	0.0046	15.9	0.2	1.2	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
DUF3150	PF11348.3	gi|332796470|ref|YP_004457970.1|	-	0.0058	15.7	0.0	0.011	14.8	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3150)
Trp_syntA	PF00290.15	gi|332796470|ref|YP_004457970.1|	-	0.0068	14.9	0.1	0.012	14.1	0.0	1.4	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
IMPDH	PF00478.20	gi|332796470|ref|YP_004457970.1|	-	0.026	13.3	0.1	0.048	12.5	0.1	1.4	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
Ribul_P_3_epim	PF00834.14	gi|332796470|ref|YP_004457970.1|	-	0.027	13.6	0.1	0.066	12.3	0.0	1.6	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
NanE	PF04131.9	gi|332796470|ref|YP_004457970.1|	-	0.037	12.9	0.0	0.29	10.0	0.0	2.1	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Glyco_tran_WecB	PF03808.8	gi|332796470|ref|YP_004457970.1|	-	0.04	13.3	0.0	4	6.8	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	WecB/TagA/CpsF	family
ThiG	PF05690.9	gi|332796470|ref|YP_004457970.1|	-	0.052	12.6	0.2	1.3	8.0	0.1	2.1	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
G3P_antiterm	PF04309.7	gi|332796470|ref|YP_004457970.1|	-	0.07	12.1	0.4	0.18	10.8	0.3	1.6	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
TPP_enzyme_M	PF00205.17	gi|332796470|ref|YP_004457970.1|	-	0.11	12.2	0.2	0.3	10.8	0.0	1.9	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
Lant_dehyd_C	PF04738.8	gi|332796470|ref|YP_004457970.1|	-	0.11	10.6	0.0	0.14	10.3	0.0	1.1	1	0	0	1	1	1	0	Lantibiotic	dehydratase,	C	terminus
Elf1	PF05129.8	gi|332796471|ref|YP_004457971.1|	-	1.1e-19	69.8	0.0	1.4e-19	69.5	0.0	1.2	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|332796471|ref|YP_004457971.1|	-	0.00033	20.8	0.1	0.00055	20.1	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.1	gi|332796471|ref|YP_004457971.1|	-	0.0013	17.8	0.4	0.0033	16.5	0.2	1.6	1	1	0	1	1	1	1	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|332796471|ref|YP_004457971.1|	-	0.0073	16.1	0.1	0.17	11.8	0.0	2.3	2	0	0	2	2	2	1	Rubredoxin
OrfB_Zn_ribbon	PF07282.6	gi|332796471|ref|YP_004457971.1|	-	0.011	15.3	0.2	0.019	14.6	0.1	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Sgf11	PF08209.6	gi|332796471|ref|YP_004457971.1|	-	0.064	12.5	1.0	2	7.7	0.1	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Zn-ribbon_8	PF09723.5	gi|332796471|ref|YP_004457971.1|	-	0.094	12.6	0.1	0.18	11.7	0.1	1.4	1	0	0	1	1	1	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|332796471|ref|YP_004457971.1|	-	0.12	11.7	0.5	9	5.7	0.0	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
DUF2387	PF09526.5	gi|332796471|ref|YP_004457971.1|	-	0.15	12.0	1.2	0.19	11.6	0.1	1.7	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zf-Mss51	PF13824.1	gi|332796471|ref|YP_004457971.1|	-	0.21	11.4	2.5	1.5	8.7	0.2	2.3	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zinc_ribbon_5	PF13719.1	gi|332796471|ref|YP_004457971.1|	-	0.27	10.8	4.5	1.3	8.7	3.0	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|332796471|ref|YP_004457971.1|	-	0.34	10.6	4.5	1.4	8.6	3.0	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|332796471|ref|YP_004457971.1|	-	0.48	10.2	2.9	1.4	8.7	2.0	1.8	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|332796471|ref|YP_004457971.1|	-	1.5	8.3	4.7	3.7	7.1	3.2	1.7	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_2	PF13240.1	gi|332796471|ref|YP_004457971.1|	-	6.5	6.3	7.3	81	2.8	4.9	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
SWIM	PF04434.12	gi|332796472|ref|YP_004457972.1|	-	1.9e-06	27.2	0.8	3.2e-06	26.4	0.6	1.4	1	0	0	1	1	1	1	SWIM	zinc	finger
Rib_5-P_isom_A	PF06026.9	gi|332796473|ref|YP_004457973.1|	-	5.5e-37	126.7	0.4	7.8e-37	126.2	0.2	1.2	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.17	gi|332796473|ref|YP_004457973.1|	-	0.005	16.4	0.2	0.011	15.3	0.1	1.6	2	0	0	2	2	2	1	DeoR	C	terminal	sensor	domain
Sugar-bind	PF04198.8	gi|332796473|ref|YP_004457973.1|	-	0.0053	15.7	0.0	0.0076	15.1	0.0	1.2	1	0	0	1	1	1	1	Putative	sugar-binding	domain
ABC_tran	PF00005.22	gi|332796474|ref|YP_004457974.1|	-	3.2e-40	137.6	0.1	1.6e-18	67.3	0.0	3.0	3	0	0	3	3	2	2	ABC	transporter
RLI	PF04068.10	gi|332796474|ref|YP_004457974.1|	-	5.6e-14	51.4	1.6	1.6e-13	50.0	1.1	1.8	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_21	PF13304.1	gi|332796474|ref|YP_004457974.1|	-	2e-13	51.0	17.1	2.2e-06	27.8	3.4	4.8	3	2	0	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|332796474|ref|YP_004457974.1|	-	1.1e-11	44.4	9.9	1.4e-05	24.4	1.8	4.3	3	2	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|332796474|ref|YP_004457974.1|	-	1.1e-08	35.8	5.8	0.0051	17.6	0.1	3.7	2	2	1	3	3	3	2	AAA	domain
Fer4	PF00037.22	gi|332796474|ref|YP_004457974.1|	-	8.5e-08	31.4	5.7	8.5e-08	31.4	4.0	2.6	3	0	0	3	3	2	1	4Fe-4S	binding	domain
AAA_23	PF13476.1	gi|332796474|ref|YP_004457974.1|	-	9.7e-08	32.5	8.6	0.00032	21.0	1.5	2.7	1	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|332796474|ref|YP_004457974.1|	-	8.4e-07	28.3	9.1	1.5	7.7	4.6	4.6	3	2	1	5	5	5	2	AAA	ATPase	domain
MobB	PF03205.9	gi|332796474|ref|YP_004457974.1|	-	1.1e-06	28.3	0.3	0.0024	17.5	0.0	3.1	3	0	0	3	3	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|332796474|ref|YP_004457974.1|	-	1.4e-06	28.5	1.6	0.015	15.5	0.4	3.2	2	2	0	2	2	2	2	AAA	domain
Fer4_7	PF12838.2	gi|332796474|ref|YP_004457974.1|	-	3e-06	27.5	17.9	0.00027	21.2	5.0	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_14	PF13173.1	gi|332796474|ref|YP_004457974.1|	-	3.7e-06	26.8	0.7	0.065	13.1	0.0	3.1	2	1	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|332796474|ref|YP_004457974.1|	-	6.8e-06	26.3	0.0	0.095	12.9	0.0	3.1	3	1	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4_2	PF12797.2	gi|332796474|ref|YP_004457974.1|	-	2.2e-05	24.1	3.8	2.2e-05	24.1	2.7	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|332796474|ref|YP_004457974.1|	-	2.5e-05	23.9	3.7	2.5e-05	23.9	2.6	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_22	PF13401.1	gi|332796474|ref|YP_004457974.1|	-	3.2e-05	24.0	0.7	0.091	12.9	0.0	3.1	3	1	0	3	3	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|332796474|ref|YP_004457974.1|	-	4.1e-05	23.6	0.1	0.17	12.0	0.0	3.1	3	0	0	3	3	2	1	RNA	helicase
AAA_29	PF13555.1	gi|332796474|ref|YP_004457974.1|	-	5.8e-05	22.5	0.4	0.2	11.2	0.1	2.9	3	0	0	3	3	3	2	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|332796474|ref|YP_004457974.1|	-	6.3e-05	22.4	0.1	0.48	9.8	0.0	3.9	4	0	0	4	4	4	1	AAA	domain
Fer4_21	PF14697.1	gi|332796474|ref|YP_004457974.1|	-	0.00012	21.8	7.6	0.0002	21.1	5.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
NACHT	PF05729.7	gi|332796474|ref|YP_004457974.1|	-	0.00018	21.2	0.1	0.044	13.4	0.0	2.6	2	0	0	2	2	2	1	NACHT	domain
DUF87	PF01935.12	gi|332796474|ref|YP_004457974.1|	-	0.0002	21.2	1.1	0.56	9.9	0.1	3.4	3	0	0	3	3	3	1	Domain	of	unknown	function	DUF87
DUF258	PF03193.11	gi|332796474|ref|YP_004457974.1|	-	0.00024	20.3	0.0	0.97	8.6	0.0	2.9	3	0	0	3	3	3	2	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|332796474|ref|YP_004457974.1|	-	0.00025	21.1	0.1	0.088	12.7	0.0	2.7	2	2	0	2	2	2	1	AAA	ATPase	domain
Fer4_10	PF13237.1	gi|332796474|ref|YP_004457974.1|	-	0.00034	20.3	10.5	0.0006	19.5	1.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Miro	PF08477.8	gi|332796474|ref|YP_004457974.1|	-	0.00039	20.8	0.3	3	8.3	0.0	3.5	3	1	0	4	4	3	0	Miro-like	protein
Arch_ATPase	PF01637.13	gi|332796474|ref|YP_004457974.1|	-	0.00048	19.9	3.0	0.14	11.8	0.1	3.0	3	1	0	3	3	2	1	Archaeal	ATPase
Fer4_9	PF13187.1	gi|332796474|ref|YP_004457974.1|	-	0.00068	19.8	6.6	0.0017	18.5	4.6	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
NB-ARC	PF00931.17	gi|332796474|ref|YP_004457974.1|	-	0.00076	18.4	0.4	0.077	11.8	0.0	2.5	2	0	0	2	2	2	1	NB-ARC	domain
SbcCD_C	PF13558.1	gi|332796474|ref|YP_004457974.1|	-	0.0015	18.4	0.3	3.6	7.5	0.0	3.3	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
KAP_NTPase	PF07693.9	gi|332796474|ref|YP_004457974.1|	-	0.0016	17.5	0.0	0.55	9.1	0.0	2.2	2	0	0	2	2	2	1	KAP	family	P-loop	domain
VirE	PF05272.6	gi|332796474|ref|YP_004457974.1|	-	0.002	17.6	0.0	0.26	10.7	0.0	2.4	2	0	0	2	2	2	1	Virulence-associated	protein	E
Rad17	PF03215.10	gi|332796474|ref|YP_004457974.1|	-	0.0022	16.7	0.0	1.1	7.8	0.0	2.4	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
PRK	PF00485.13	gi|332796474|ref|YP_004457974.1|	-	0.0022	17.6	0.0	0.93	9.0	0.0	2.4	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_33	PF13671.1	gi|332796474|ref|YP_004457974.1|	-	0.0033	17.2	0.2	0.57	10.0	0.0	3.3	2	2	0	2	2	2	1	AAA	domain
Fer4_16	PF13484.1	gi|332796474|ref|YP_004457974.1|	-	0.0038	17.9	0.6	0.0038	17.9	0.4	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
AAA_32	PF13654.1	gi|332796474|ref|YP_004457974.1|	-	0.0042	15.8	0.4	0.67	8.5	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
ArgK	PF03308.11	gi|332796474|ref|YP_004457974.1|	-	0.0069	15.1	0.2	2.4	6.8	0.0	2.5	2	0	0	2	2	2	1	ArgK	protein
AAA_13	PF13166.1	gi|332796474|ref|YP_004457974.1|	-	0.0072	14.8	0.4	0.98	7.8	0.1	3.0	3	0	0	3	3	3	1	AAA	domain
UPF0079	PF02367.12	gi|332796474|ref|YP_004457974.1|	-	0.0089	15.6	0.6	0.54	9.9	0.0	2.9	2	1	1	3	3	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
Pox_A32	PF04665.7	gi|332796474|ref|YP_004457974.1|	-	0.0097	15.2	0.5	2.1	7.5	0.0	2.4	2	0	0	2	2	2	1	Poxvirus	A32	protein
AAA_28	PF13521.1	gi|332796474|ref|YP_004457974.1|	-	0.012	15.5	0.0	3	7.7	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.9	gi|332796474|ref|YP_004457974.1|	-	0.016	14.9	0.4	25	4.6	0.0	3.6	4	0	0	4	4	3	0	AAA	domain	(dynein-related	subfamily)
Fer4_3	PF12798.2	gi|332796474|ref|YP_004457974.1|	-	0.02	15.4	4.8	0.02	15.4	3.4	2.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AAA_30	PF13604.1	gi|332796474|ref|YP_004457974.1|	-	0.02	14.4	0.1	13	5.3	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
AAA_24	PF13479.1	gi|332796474|ref|YP_004457974.1|	-	0.029	13.9	1.0	5.8	6.4	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332796474|ref|YP_004457974.1|	-	0.029	13.8	0.1	6.9	6.0	0.0	2.6	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_10	PF12846.2	gi|332796474|ref|YP_004457974.1|	-	0.035	13.5	1.3	2.4	7.5	0.0	3.0	3	1	0	4	4	2	0	AAA-like	domain
T2SE	PF00437.15	gi|332796474|ref|YP_004457974.1|	-	0.036	12.9	0.1	3.9	6.2	0.0	2.2	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Spore_IV_A	PF09547.5	gi|332796474|ref|YP_004457974.1|	-	0.043	12.5	0.1	4.2	5.9	0.0	2.3	2	0	0	2	2	2	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
Fer4_15	PF13459.1	gi|332796474|ref|YP_004457974.1|	-	0.053	14.0	1.4	0.13	12.8	0.9	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
NTPase_1	PF03266.10	gi|332796474|ref|YP_004457974.1|	-	0.062	12.9	0.8	3.1	7.4	0.0	3.0	2	0	0	2	2	2	0	NTPase
ATP-synt_ab	PF00006.20	gi|332796474|ref|YP_004457974.1|	-	0.072	12.5	0.1	15	5.0	0.0	2.5	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MMR_HSR1	PF01926.18	gi|332796474|ref|YP_004457974.1|	-	0.11	12.4	6.2	4.4	7.2	0.7	3.2	2	2	0	2	2	2	0	50S	ribosome-binding	GTPase
Fer4_8	PF13183.1	gi|332796474|ref|YP_004457974.1|	-	0.11	12.5	4.4	0.078	13.0	1.2	1.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332796474|ref|YP_004457974.1|	-	0.12	12.7	1.6	0.29	11.5	1.1	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|332796474|ref|YP_004457974.1|	-	0.34	11.3	7.2	0.17	12.2	1.5	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|332796474|ref|YP_004457974.1|	-	0.41	11.0	12.0	0.06	13.7	2.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332796474|ref|YP_004457974.1|	-	3.5	8.1	10.3	0.56	10.6	3.0	2.3	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
FBPase_3	PF01950.11	gi|332796475|ref|YP_004457975.1|	-	9.8e-184	610.4	0.0	1.1e-183	610.2	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
Ribosomal_S17e	PF00833.13	gi|332796476|ref|YP_004457976.1|	-	2e-17	63.1	2.2	2e-17	63.0	1.5	1.0	1	0	0	1	1	1	1	Ribosomal	S17
PLD_C	PF12357.3	gi|332796476|ref|YP_004457976.1|	-	0.024	14.1	0.2	1.2	8.6	0.0	2.0	1	1	1	2	2	2	0	Phospholipase	D	C	terminal
DUF4473	PF14747.1	gi|332796476|ref|YP_004457976.1|	-	0.027	14.6	0.6	0.041	14.0	0.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
CRISPR_Cas2	PF09827.4	gi|332796476|ref|YP_004457976.1|	-	0.11	12.6	1.3	0.23	11.6	0.1	1.8	1	1	1	2	2	2	0	CRISPR	associated	protein	Cas2
Urm1	PF09138.6	gi|332796477|ref|YP_004457977.1|	-	2.6e-08	33.8	0.7	3.1e-08	33.6	0.5	1.2	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
ThiS	PF02597.15	gi|332796477|ref|YP_004457977.1|	-	0.0016	18.8	0.1	0.0019	18.5	0.1	1.1	1	0	0	1	1	1	1	ThiS	family
DUF2194	PF09960.4	gi|332796477|ref|YP_004457977.1|	-	0.13	10.3	0.0	0.13	10.2	0.0	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2194)
DUF87	PF01935.12	gi|332796479|ref|YP_004457979.1|	-	4.3e-29	101.9	1.3	4.3e-29	101.9	0.9	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|332796479|ref|YP_004457979.1|	-	7.2e-24	84.7	0.8	1.4e-23	83.8	0.5	1.5	1	0	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|332796479|ref|YP_004457979.1|	-	1.1e-09	37.2	0.0	0.00027	19.4	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|332796479|ref|YP_004457979.1|	-	2.8e-08	32.7	0.0	2.5e-07	29.6	0.0	2.1	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.7	gi|332796479|ref|YP_004457979.1|	-	6.5e-05	22.4	0.1	0.0015	18.0	0.0	2.4	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_17	PF13207.1	gi|332796479|ref|YP_004457979.1|	-	0.00042	21.1	1.3	0.0013	19.5	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|332796479|ref|YP_004457979.1|	-	0.00077	19.7	0.1	0.00077	19.7	0.1	3.4	2	1	2	4	4	4	1	AAA	domain
T4SS-DNA_transf	PF02534.9	gi|332796479|ref|YP_004457979.1|	-	0.0015	17.1	0.0	0.0034	16.0	0.0	1.5	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA	PF00004.24	gi|332796479|ref|YP_004457979.1|	-	0.0039	17.3	0.2	4.8	7.3	0.2	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CbiA	PF01656.18	gi|332796479|ref|YP_004457979.1|	-	0.0039	16.6	0.0	0.012	14.9	0.0	1.9	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|332796479|ref|YP_004457979.1|	-	0.005	16.9	1.0	2.4	8.2	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332796479|ref|YP_004457979.1|	-	0.0057	16.1	0.0	0.013	14.9	0.0	1.5	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
MobB	PF03205.9	gi|332796479|ref|YP_004457979.1|	-	0.015	15.0	0.0	0.035	13.8	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ResIII	PF04851.10	gi|332796479|ref|YP_004457979.1|	-	0.062	13.1	0.5	0.26	11.0	0.0	2.2	3	0	0	3	3	3	0	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|332796479|ref|YP_004457979.1|	-	0.098	12.1	0.0	3.4	7.1	0.0	2.4	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
ABC_tran	PF00005.22	gi|332796479|ref|YP_004457979.1|	-	0.11	12.7	0.0	0.43	10.8	0.0	1.9	2	0	0	2	2	1	0	ABC	transporter
Cpn60_TCP1	PF00118.19	gi|332796480|ref|YP_004457980.1|	-	1.2e-166	555.0	9.0	1.4e-166	554.8	6.3	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DMA	PF03474.9	gi|332796480|ref|YP_004457980.1|	-	0.082	12.7	0.0	14	5.6	0.0	2.6	2	0	0	2	2	2	0	DMRTA	motif
TF_Zn_Ribbon	PF08271.7	gi|332796481|ref|YP_004457981.1|	-	2.2e-10	39.6	0.2	6.2e-10	38.2	0.2	1.8	1	0	0	1	1	1	1	TFIIB	zinc-binding
Ribosomal_S27e	PF01667.12	gi|332796481|ref|YP_004457981.1|	-	0.00061	19.2	0.4	0.0013	18.2	0.3	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S27
RRN7	PF11781.3	gi|332796481|ref|YP_004457981.1|	-	0.045	13.2	0.2	0.11	11.9	0.1	1.8	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Lar_restr_allev	PF14354.1	gi|332796481|ref|YP_004457981.1|	-	0.053	13.8	0.1	0.093	13.0	0.0	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
A2L_zn_ribbon	PF08792.5	gi|332796481|ref|YP_004457981.1|	-	0.082	12.3	1.7	0.23	10.9	1.1	1.7	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF4182	PF13790.1	gi|332796481|ref|YP_004457981.1|	-	0.11	12.2	0.2	0.29	10.9	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4182)
Cys_rich_CPXG	PF14255.1	gi|332796481|ref|YP_004457981.1|	-	0.36	10.6	2.2	18	5.2	0.2	2.4	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
Prim_Zn_Ribbon	PF08273.7	gi|332796481|ref|YP_004457981.1|	-	0.74	9.9	4.0	2.1	8.4	1.0	2.4	2	1	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
tRNA_int_endo	PF01974.12	gi|332796482|ref|YP_004457982.1|	-	0.00016	21.3	0.1	0.00028	20.6	0.1	1.4	1	1	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Acetyltransf_4	PF13420.1	gi|332796482|ref|YP_004457982.1|	-	0.012	15.5	0.1	0.023	14.6	0.0	1.4	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Coprogen_oxidas	PF01218.13	gi|332796482|ref|YP_004457982.1|	-	0.1	11.1	0.0	0.12	10.9	0.0	1.1	1	0	0	1	1	1	0	Coproporphyrinogen	III	oxidase
tRNA-synt_His	PF13393.1	gi|332796483|ref|YP_004457983.1|	-	3.6e-71	239.7	0.0	4.2e-71	239.5	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|332796483|ref|YP_004457983.1|	-	1.1e-23	83.7	0.7	2.6e-23	82.4	0.2	1.8	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|332796483|ref|YP_004457983.1|	-	9.4e-13	47.9	0.1	2.2e-12	46.7	0.1	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.15	gi|332796483|ref|YP_004457983.1|	-	2.7e-05	23.5	0.0	8e-05	21.9	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|332796483|ref|YP_004457983.1|	-	0.0011	17.7	1.2	0.51	9.0	0.3	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
Proteasome	PF00227.21	gi|332796484|ref|YP_004457984.1|	-	7.8e-47	159.0	0.1	9.2e-47	158.7	0.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
RNA_pol_Rpb8	PF03870.10	gi|332796485|ref|YP_004457985.1|	-	0.038	14.1	2.3	0.58	10.3	1.6	2.0	1	1	0	1	1	1	0	RNA	polymerase	Rpb8
Lsm_C	PF14894.1	gi|332796486|ref|YP_004457986.1|	-	1.1e-29	101.7	0.6	1.7e-29	101.0	0.4	1.3	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.17	gi|332796486|ref|YP_004457986.1|	-	1.9e-06	27.2	0.1	4e-06	26.2	0.1	1.5	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|332796486|ref|YP_004457986.1|	-	0.00029	20.7	0.0	0.00043	20.1	0.0	1.3	1	0	0	1	1	1	1	Ataxin	2	SM	domain
Tail_tube	PF10618.4	gi|332796486|ref|YP_004457986.1|	-	0.059	13.1	0.1	0.14	11.9	0.0	1.6	1	1	1	2	2	2	0	Phage	tail	tube	protein
TGT	PF01702.13	gi|332796487|ref|YP_004457987.1|	-	1.6e-47	161.8	0.0	2.3e-47	161.2	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
PAC2	PF09754.4	gi|332796488|ref|YP_004457988.1|	-	5.7e-37	127.6	0.0	7.1e-37	127.3	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
AAA_23	PF13476.1	gi|332796488|ref|YP_004457988.1|	-	0.012	15.9	0.6	0.014	15.7	0.4	1.2	1	0	0	1	1	1	0	AAA	domain
Exonuc_VII_S	PF02609.11	gi|332796488|ref|YP_004457988.1|	-	0.043	13.5	1.6	0.085	12.6	1.1	1.5	1	0	0	1	1	1	0	Exonuclease	VII	small	subunit
TGT_C2	PF14810.1	gi|332796489|ref|YP_004457989.1|	-	8.1e-15	54.4	0.0	2.2e-14	53.0	0.0	1.6	2	0	0	2	2	2	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.15	gi|332796489|ref|YP_004457989.1|	-	2.3e-14	52.8	2.2	3.3e-14	52.3	1.5	1.2	1	0	0	1	1	1	1	PUA	domain
Acetyltransf_7	PF13508.1	gi|332796489|ref|YP_004457989.1|	-	0.057	13.5	0.0	0.14	12.3	0.0	1.7	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
AAA	PF00004.24	gi|332796490|ref|YP_004457990.1|	-	7e-44	149.2	0.0	1.5e-43	148.1	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|332796490|ref|YP_004457990.1|	-	5.6e-08	32.8	0.0	2.2e-07	30.9	0.0	1.9	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|332796490|ref|YP_004457990.1|	-	3.6e-06	27.1	0.0	2.4e-05	24.3	0.0	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332796490|ref|YP_004457990.1|	-	5.1e-06	26.6	0.5	0.00016	21.8	0.1	2.8	2	1	0	2	2	1	1	AAA	domain
AAA_5	PF07728.9	gi|332796490|ref|YP_004457990.1|	-	9.5e-06	25.3	0.1	7.3e-05	22.5	0.1	2.4	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|332796490|ref|YP_004457990.1|	-	1.3e-05	24.3	0.0	5.4e-05	22.3	0.0	2.0	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|332796490|ref|YP_004457990.1|	-	9.1e-05	23.2	0.3	0.00047	20.9	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|332796490|ref|YP_004457990.1|	-	0.00022	21.1	0.1	0.00096	19.0	0.0	2.2	3	0	0	3	3	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|332796490|ref|YP_004457990.1|	-	0.00029	19.9	0.0	0.00058	19.0	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_28	PF13521.1	gi|332796490|ref|YP_004457990.1|	-	0.0006	19.7	0.0	0.0011	18.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|332796490|ref|YP_004457990.1|	-	0.00075	18.9	0.1	0.0019	17.6	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DUF815	PF05673.8	gi|332796490|ref|YP_004457990.1|	-	0.00086	18.3	0.0	0.0018	17.2	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Mg_chelatase	PF01078.16	gi|332796490|ref|YP_004457990.1|	-	0.001	18.2	0.0	0.0021	17.2	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
TIP49	PF06068.8	gi|332796490|ref|YP_004457990.1|	-	0.0016	17.2	0.0	0.0031	16.2	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_19	PF13245.1	gi|332796490|ref|YP_004457990.1|	-	0.0026	17.4	0.1	0.0055	16.4	0.1	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|332796490|ref|YP_004457990.1|	-	0.0027	17.6	0.0	0.0055	16.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|332796490|ref|YP_004457990.1|	-	0.0034	16.9	0.0	0.0069	15.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|332796490|ref|YP_004457990.1|	-	0.0042	16.5	0.8	0.035	13.5	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|332796490|ref|YP_004457990.1|	-	0.0074	15.9	0.1	0.055	13.1	0.0	2.1	2	0	0	2	2	2	1	NACHT	domain
RNA_helicase	PF00910.17	gi|332796490|ref|YP_004457990.1|	-	0.0092	16.1	0.0	0.023	14.8	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
Arch_ATPase	PF01637.13	gi|332796490|ref|YP_004457990.1|	-	0.0094	15.6	0.9	0.026	14.2	0.0	2.2	3	1	0	3	3	2	1	Archaeal	ATPase
Sigma54_activat	PF00158.21	gi|332796490|ref|YP_004457990.1|	-	0.01	15.3	0.0	0.038	13.4	0.0	1.9	2	0	0	2	2	1	0	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|332796490|ref|YP_004457990.1|	-	0.011	16.0	1.2	0.072	13.4	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
bZIP_1	PF00170.16	gi|332796490|ref|YP_004457990.1|	-	0.013	15.4	3.7	0.013	15.4	2.5	2.1	3	0	0	3	3	2	0	bZIP	transcription	factor
Bac_DnaA	PF00308.13	gi|332796490|ref|YP_004457990.1|	-	0.013	15.1	0.7	0.038	13.6	0.0	2.1	3	0	0	3	3	1	0	Bacterial	dnaA	protein
KaiC	PF06745.8	gi|332796490|ref|YP_004457990.1|	-	0.016	14.3	1.0	0.049	12.7	0.1	2.2	2	1	0	2	2	2	0	KaiC
Sigma54_activ_2	PF14532.1	gi|332796490|ref|YP_004457990.1|	-	0.02	14.9	0.0	0.059	13.4	0.0	1.8	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Parvo_NS1	PF01057.12	gi|332796490|ref|YP_004457990.1|	-	0.03	13.1	0.0	0.052	12.4	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|332796490|ref|YP_004457990.1|	-	0.037	14.3	0.1	0.23	11.7	0.0	2.2	2	1	0	2	2	2	0	ABC	transporter
PhoH	PF02562.11	gi|332796490|ref|YP_004457990.1|	-	0.039	13.1	0.1	0.11	11.7	0.0	1.7	1	0	0	1	1	1	0	PhoH-like	protein
NB-ARC	PF00931.17	gi|332796490|ref|YP_004457990.1|	-	0.059	12.2	0.3	0.17	10.7	0.0	1.8	2	0	0	2	2	2	0	NB-ARC	domain
Prefoldin_2	PF01920.15	gi|332796490|ref|YP_004457990.1|	-	0.061	13.0	5.1	0.048	13.4	2.0	1.9	2	0	0	2	2	1	0	Prefoldin	subunit
CPT	PF07931.7	gi|332796490|ref|YP_004457990.1|	-	0.076	12.6	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
ThylakoidFormat	PF11264.3	gi|332796490|ref|YP_004457990.1|	-	0.081	12.5	0.3	0.18	11.4	0.2	1.5	1	0	0	1	1	1	0	Thylakoid	formation	protein
ATP-synt_ab	PF00006.20	gi|332796490|ref|YP_004457990.1|	-	0.12	11.8	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_3	PF07726.6	gi|332796490|ref|YP_004457990.1|	-	0.12	11.9	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DivIC	PF04977.10	gi|332796490|ref|YP_004457990.1|	-	0.25	10.8	3.1	0.43	10.0	0.9	2.2	2	0	0	2	2	2	0	Septum	formation	initiator
FlaC_arch	PF05377.6	gi|332796490|ref|YP_004457990.1|	-	0.28	11.1	3.1	2.1	8.2	1.0	2.6	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
THOC7	PF05615.8	gi|332796490|ref|YP_004457990.1|	-	1.1	9.5	7.7	0.14	12.3	2.1	1.9	2	0	0	2	2	1	0	Tho	complex	subunit	7
AAA_23	PF13476.1	gi|332796490|ref|YP_004457990.1|	-	1.6	8.9	0.0	1.6	8.9	0.0	3.2	3	1	0	3	3	3	0	AAA	domain
HTH_3	PF01381.17	gi|332796491|ref|YP_004457991.1|	-	2.9e-09	36.6	1.5	4.7e-09	35.9	1.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|332796491|ref|YP_004457991.1|	-	7.7e-08	32.2	3.3	7.8e-08	32.2	0.7	2.0	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|332796491|ref|YP_004457991.1|	-	5.9e-07	29.5	0.0	7.7e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|332796491|ref|YP_004457991.1|	-	1.3e-06	27.9	0.1	2e-06	27.3	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Death	PF00531.17	gi|332796491|ref|YP_004457991.1|	-	0.0092	15.7	0.0	0.016	14.9	0.0	1.3	1	0	0	1	1	1	1	Death	domain
HTH_37	PF13744.1	gi|332796491|ref|YP_004457991.1|	-	0.012	15.3	0.5	0.022	14.5	0.3	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|332796491|ref|YP_004457991.1|	-	0.042	13.5	0.1	0.15	11.7	0.0	2.0	1	1	0	1	1	1	0	Homeodomain-like	domain
Terminase_4	PF05119.7	gi|332796491|ref|YP_004457991.1|	-	0.042	13.9	0.1	0.067	13.3	0.1	1.4	1	0	0	1	1	1	0	Phage	terminase,	small	subunit
Thymosin	PF01290.15	gi|332796491|ref|YP_004457991.1|	-	0.12	12.0	1.5	0.15	11.6	0.1	1.9	2	0	0	2	2	2	0	Thymosin	beta-4	family
DUF3071	PF11268.3	gi|332796491|ref|YP_004457991.1|	-	0.12	12.1	0.2	0.15	11.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3071)
DUF45	PF01863.12	gi|332796491|ref|YP_004457991.1|	-	0.29	10.8	2.9	0.34	10.6	2.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF45
Nucleoside_tran	PF01733.13	gi|332796491|ref|YP_004457991.1|	-	0.55	9.3	2.4	0.64	9.1	1.6	1.2	1	1	0	1	1	1	0	Nucleoside	transporter
MMR_HSR1	PF01926.18	gi|332796492|ref|YP_004457992.1|	-	1.6e-18	66.7	0.3	3.8e-18	65.5	0.2	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|332796492|ref|YP_004457992.1|	-	1.6e-08	34.0	0.6	2.9e-08	33.1	0.1	1.8	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|332796492|ref|YP_004457992.1|	-	3e-06	27.7	0.1	8.7e-06	26.2	0.1	1.8	2	0	0	2	2	2	1	Miro-like	protein
GTP-bdg_N	PF13167.1	gi|332796492|ref|YP_004457992.1|	-	4.9e-06	26.5	0.0	1.2e-05	25.3	0.0	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
GTP_EFTU	PF00009.22	gi|332796492|ref|YP_004457992.1|	-	0.00012	21.5	0.2	0.0097	15.3	0.1	2.4	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.18	gi|332796492|ref|YP_004457992.1|	-	0.00034	20.4	0.5	0.93	9.2	0.0	2.4	1	1	1	2	2	2	2	Dynamin	family
SRPRB	PF09439.5	gi|332796492|ref|YP_004457992.1|	-	0.00053	19.2	0.3	0.001	18.2	0.2	1.5	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
ABC_tran	PF00005.22	gi|332796492|ref|YP_004457992.1|	-	0.042	14.1	0.1	0.093	13.0	0.1	1.6	1	0	0	1	1	1	0	ABC	transporter
AAA_23	PF13476.1	gi|332796492|ref|YP_004457992.1|	-	2.2	8.5	11.2	2.9	8.1	3.5	2.6	1	1	1	2	2	2	0	AAA	domain
TFIIE_alpha	PF02002.12	gi|332796493|ref|YP_004457993.1|	-	3.8e-27	93.8	7.0	3.8e-27	93.8	4.9	2.0	2	0	0	2	2	2	1	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|332796493|ref|YP_004457993.1|	-	5.9e-05	22.6	0.4	0.00013	21.5	0.0	1.8	2	0	0	2	2	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_9	PF08221.6	gi|332796493|ref|YP_004457993.1|	-	0.0004	20.2	0.1	0.0023	17.7	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_20	PF12840.2	gi|332796493|ref|YP_004457993.1|	-	0.0016	18.2	0.0	0.003	17.3	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
zf-ISL3	PF14690.1	gi|332796493|ref|YP_004457993.1|	-	0.0018	18.2	0.2	0.0059	16.6	0.0	1.9	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TF_Zn_Ribbon	PF08271.7	gi|332796493|ref|YP_004457993.1|	-	0.0022	17.2	1.4	0.0072	15.6	1.0	1.9	1	1	0	1	1	1	1	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|332796493|ref|YP_004457993.1|	-	0.0054	16.5	0.0	0.01	15.6	0.0	1.5	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Sigma70_r3	PF04539.11	gi|332796493|ref|YP_004457993.1|	-	0.014	15.2	0.3	0.065	13.1	0.0	2.3	2	1	0	2	2	2	0	Sigma-70	region	3
zf-C4_Topoisom	PF01396.14	gi|332796493|ref|YP_004457993.1|	-	0.016	14.7	0.1	0.046	13.2	0.0	1.8	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
ARGLU	PF15346.1	gi|332796493|ref|YP_004457993.1|	-	0.018	14.7	2.7	0.028	14.2	0.1	2.0	2	0	0	2	2	2	0	Arginine	and	glutamate-rich	1
Phage_rep_org_N	PF09681.5	gi|332796493|ref|YP_004457993.1|	-	0.018	14.5	0.1	0.038	13.5	0.1	1.6	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
LexA_DNA_bind	PF01726.11	gi|332796493|ref|YP_004457993.1|	-	0.02	14.4	0.2	0.21	11.2	0.0	2.2	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HypA	PF01155.14	gi|332796493|ref|YP_004457993.1|	-	0.027	14.1	0.0	0.044	13.4	0.0	1.4	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Rrf2	PF02082.15	gi|332796493|ref|YP_004457993.1|	-	0.031	14.4	0.2	0.076	13.1	0.0	1.7	2	0	0	2	2	1	0	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|332796493|ref|YP_004457993.1|	-	0.046	13.5	0.0	0.12	12.2	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Phage_terminase	PF10668.4	gi|332796493|ref|YP_004457993.1|	-	0.057	13.2	0.1	0.21	11.3	0.1	1.9	1	0	0	1	1	1	0	Phage	terminase	small	subunit
z-alpha	PF02295.12	gi|332796493|ref|YP_004457993.1|	-	0.064	13.0	0.1	0.064	13.0	0.1	2.1	3	0	0	3	3	2	0	Adenosine	deaminase	z-alpha	domain
HTH_Mga	PF08280.6	gi|332796493|ref|YP_004457993.1|	-	0.08	12.7	1.7	0.1	12.3	0.2	1.9	2	0	0	2	2	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MerR-DNA-bind	PF09278.6	gi|332796493|ref|YP_004457993.1|	-	0.088	13.2	1.6	5.3	7.5	0.0	3.0	3	0	0	3	3	3	0	MerR,	DNA	binding
IF2_N	PF04760.10	gi|332796493|ref|YP_004457993.1|	-	0.1	12.2	2.6	0.19	11.4	0.1	2.6	2	1	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
zf-IS66	PF13005.2	gi|332796493|ref|YP_004457993.1|	-	0.1	12.5	0.1	0.43	10.6	0.0	2.0	2	0	0	2	2	1	0	zinc-finger	binding	domain	of	transposase	IS66
RPA_C	PF08784.6	gi|332796493|ref|YP_004457993.1|	-	0.11	12.9	0.0	0.21	12.0	0.0	1.6	1	1	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_5	PF01022.15	gi|332796493|ref|YP_004457993.1|	-	0.12	12.0	0.0	0.29	10.8	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|332796493|ref|YP_004457993.1|	-	0.12	11.8	0.0	0.36	10.2	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF2250	PF10007.4	gi|332796493|ref|YP_004457993.1|	-	0.14	12.1	1.2	0.2	11.5	0.1	1.8	2	0	0	2	2	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_DeoR	PF08220.7	gi|332796493|ref|YP_004457993.1|	-	0.14	11.6	1.1	0.22	11.1	0.1	1.8	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HTH_11	PF08279.7	gi|332796493|ref|YP_004457993.1|	-	0.21	11.2	0.1	0.21	11.2	0.1	2.3	3	0	0	3	3	3	0	HTH	domain
DUF1610	PF07754.6	gi|332796493|ref|YP_004457993.1|	-	0.97	9.6	5.5	0.18	11.9	1.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Rad50_zn_hook	PF04423.9	gi|332796493|ref|YP_004457993.1|	-	1.6	8.2	9.0	0.24	10.8	0.4	3.3	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
DNA_methylase	PF00145.12	gi|332796494|ref|YP_004457994.1|	-	4e-53	180.6	0.0	9.4e-39	133.4	0.0	2.1	1	1	0	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_26	PF13659.1	gi|332796494|ref|YP_004457994.1|	-	5.9e-06	26.3	0.0	8.9e-06	25.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|332796494|ref|YP_004457994.1|	-	0.00036	20.1	0.0	0.0006	19.4	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
DUF2122	PF09895.4	gi|332796495|ref|YP_004457995.1|	-	1.5e-34	118.3	0.1	2e-34	117.9	0.0	1.2	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
LSM	PF01423.17	gi|332796496|ref|YP_004457996.1|	-	5.6e-22	77.0	0.4	6.3e-22	76.9	0.2	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|332796496|ref|YP_004457996.1|	-	0.011	15.6	0.1	0.015	15.2	0.1	1.2	1	0	0	1	1	1	0	Ataxin	2	SM	domain
Ribosomal_L37e	PF01907.14	gi|332796497|ref|YP_004457997.1|	-	2.7e-27	94.3	10.4	2.9e-27	94.2	7.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|332796497|ref|YP_004457997.1|	-	0.0022	17.7	2.0	0.0028	17.4	1.4	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
IGFL	PF14653.1	gi|332796497|ref|YP_004457997.1|	-	0.0055	16.7	2.0	0.0059	16.5	1.4	1.2	1	0	0	1	1	1	1	Insulin	growth	factor-like	family
Stc1	PF12898.2	gi|332796497|ref|YP_004457997.1|	-	0.0086	16.1	0.3	0.0092	16.0	0.2	1.1	1	0	0	1	1	1	1	Stc1	domain
GCC2_GCC3	PF07699.8	gi|332796497|ref|YP_004457997.1|	-	0.031	13.8	1.1	0.041	13.4	0.8	1.3	1	0	0	1	1	1	0	GCC2	and	GCC3
NOB1_Zn_bind	PF08772.6	gi|332796497|ref|YP_004457997.1|	-	0.035	13.9	0.8	0.046	13.5	0.6	1.3	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
OrfB_Zn_ribbon	PF07282.6	gi|332796497|ref|YP_004457997.1|	-	0.046	13.3	2.1	0.064	12.9	1.4	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|332796497|ref|YP_004457997.1|	-	0.054	12.7	2.5	0.089	12.0	1.7	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
Cript	PF10235.4	gi|332796497|ref|YP_004457997.1|	-	0.055	13.8	0.9	0.071	13.4	0.6	1.2	1	0	0	1	1	1	0	Microtubule-associated	protein	CRIPT
HypA	PF01155.14	gi|332796497|ref|YP_004457997.1|	-	0.15	11.7	0.4	0.16	11.6	0.3	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
FYVE_2	PF02318.11	gi|332796497|ref|YP_004457997.1|	-	0.16	11.8	1.3	0.18	11.7	0.9	1.0	1	0	0	1	1	1	0	FYVE-type	zinc	finger
DUF35_N	PF12172.3	gi|332796497|ref|YP_004457997.1|	-	0.54	10.2	5.8	0.76	9.7	4.1	1.2	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Ribosomal_L32p	PF01783.18	gi|332796497|ref|YP_004457997.1|	-	2	8.6	8.6	3.6	7.8	3.8	2.0	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
zf-LSD1	PF06943.7	gi|332796497|ref|YP_004457997.1|	-	3	7.5	7.8	0.27	10.8	0.8	2.1	2	0	0	2	2	2	0	LSD1	zinc	finger
FYVE	PF01363.16	gi|332796497|ref|YP_004457997.1|	-	4.2	7.3	8.7	6.9	6.6	6.0	1.6	1	1	0	1	1	1	0	FYVE	zinc	finger
Spermine_synth	PF01564.12	gi|332796498|ref|YP_004457998.1|	-	8.2e-62	208.3	0.1	1.1e-61	207.9	0.1	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_26	PF13659.1	gi|332796498|ref|YP_004457998.1|	-	4e-06	26.8	0.0	8e-06	25.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332796498|ref|YP_004457998.1|	-	6e-06	26.6	0.0	1.8e-05	25.0	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332796498|ref|YP_004457998.1|	-	1.2e-05	25.8	0.0	2.4e-05	24.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332796498|ref|YP_004457998.1|	-	1.3e-05	24.8	0.0	1.8e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332796498|ref|YP_004457998.1|	-	1.9e-05	24.0	0.0	3e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_30	PF05430.6	gi|332796498|ref|YP_004457998.1|	-	2.3e-05	24.0	0.0	4.3e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_25	PF13649.1	gi|332796498|ref|YP_004457998.1|	-	0.0036	17.6	0.0	0.0079	16.5	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|332796498|ref|YP_004457998.1|	-	0.037	13.3	0.0	0.056	12.7	0.0	1.2	1	0	0	1	1	1	0	MraW	methylase	family
NSP13	PF06460.7	gi|332796498|ref|YP_004457998.1|	-	0.055	12.3	0.6	4.6	6.0	0.0	2.4	2	1	0	2	2	2	0	Coronavirus	NSP13
AAA_31	PF13614.1	gi|332796498|ref|YP_004457998.1|	-	0.057	13.3	0.2	0.19	11.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Phage_connect_1	PF05135.8	gi|332796498|ref|YP_004457998.1|	-	0.088	12.9	0.3	0.18	11.9	0.2	1.6	1	0	0	1	1	1	0	Phage	gp6-like	head-tail	connector	protein
IL28A	PF15177.1	gi|332796498|ref|YP_004457998.1|	-	0.15	11.5	0.0	0.28	10.6	0.0	1.3	1	0	0	1	1	1	0	Interleukin-28A
Ribosomal_L21e	PF01157.13	gi|332796499|ref|YP_004457999.1|	-	5.3e-25	87.1	0.4	5.9e-25	86.9	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
TOBE_2	PF08402.5	gi|332796499|ref|YP_004457999.1|	-	0.098	12.6	0.8	15	5.6	0.1	2.5	1	1	2	3	3	3	0	TOBE	domain
RNA_pol_Rpb4	PF03874.11	gi|332796500|ref|YP_004458000.1|	-	1.2e-14	54.2	2.9	1.3e-14	54.1	2.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
Rsbr_N	PF08678.5	gi|332796500|ref|YP_004458000.1|	-	0.011	15.6	0.5	0.019	14.8	0.2	1.5	1	1	0	1	1	1	0	Rsbr	N	terminal
Laps	PF10169.4	gi|332796500|ref|YP_004458000.1|	-	0.065	13.4	1.4	0.17	12.1	0.2	1.8	1	1	0	2	2	2	0	Learning-associated	protein
NDUFB10	PF10249.4	gi|332796500|ref|YP_004458000.1|	-	0.093	12.8	0.2	0.1	12.7	0.1	1.0	1	0	0	1	1	1	0	NADH-ubiquinone	oxidoreductase	subunit	10
SRI	PF08236.6	gi|332796500|ref|YP_004458000.1|	-	0.094	12.6	0.2	0.16	11.9	0.1	1.5	1	1	0	1	1	1	0	SRI	(Set2	Rpb1	interacting)	domain
HRDC	PF00570.18	gi|332796500|ref|YP_004458000.1|	-	0.11	12.1	0.0	0.25	11.0	0.0	1.7	1	1	0	1	1	1	0	HRDC	domain
DUF655	PF04919.7	gi|332796501|ref|YP_004458001.1|	-	2.6e-58	196.7	6.3	3.1e-58	196.4	4.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|332796501|ref|YP_004458001.1|	-	7.9e-05	22.6	0.5	0.00044	20.2	0.0	2.3	2	1	1	3	3	3	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|332796501|ref|YP_004458001.1|	-	0.00015	21.6	0.5	0.00042	20.1	0.1	2.0	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
DUF1931	PF09123.6	gi|332796501|ref|YP_004458001.1|	-	0.005	16.7	1.3	1	9.3	0.0	2.6	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF1931)
HHH	PF00633.18	gi|332796501|ref|YP_004458001.1|	-	0.011	15.3	0.1	0.039	13.6	0.1	1.9	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|332796501|ref|YP_004458001.1|	-	0.3	11.2	3.0	0.21	11.7	0.6	1.9	2	1	0	2	2	2	0	Helix-hairpin-helix	domain
RrnaAD	PF00398.15	gi|332796502|ref|YP_004458002.1|	-	9.4e-17	60.8	0.2	2e-16	59.8	0.1	1.5	1	1	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_31	PF13847.1	gi|332796502|ref|YP_004458002.1|	-	0.06	12.9	0.2	0.092	12.3	0.1	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|332796503|ref|YP_004458003.1|	-	3.5e-11	42.7	0.0	5.9e-11	42.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|332796503|ref|YP_004458003.1|	-	5.1e-10	39.3	0.0	6.6e-10	39.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|332796503|ref|YP_004458003.1|	-	1.1e-07	31.3	0.1	1.6e-07	30.7	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|332796503|ref|YP_004458003.1|	-	7.9e-06	25.5	0.0	1e-05	25.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|332796503|ref|YP_004458003.1|	-	8.1e-06	25.5	0.0	1.2e-05	24.9	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Met_10	PF02475.11	gi|332796503|ref|YP_004458003.1|	-	8e-05	22.3	0.0	0.0001	21.9	0.0	1.3	1	1	0	1	1	1	1	Met-10+	like-protein
RrnaAD	PF00398.15	gi|332796503|ref|YP_004458003.1|	-	0.00021	20.4	0.0	0.0003	19.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.1	gi|332796503|ref|YP_004458003.1|	-	0.0006	19.5	0.0	0.00087	19.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332796503|ref|YP_004458003.1|	-	0.003	18.1	0.0	0.0043	17.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|332796503|ref|YP_004458003.1|	-	0.011	15.2	0.5	0.019	14.4	0.1	1.6	2	0	0	2	2	2	0	Putative	methyltransferase
Methyltransf_3	PF01596.12	gi|332796503|ref|YP_004458003.1|	-	0.1	11.6	0.0	0.15	11.0	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
GCD14	PF08704.5	gi|332796503|ref|YP_004458003.1|	-	0.11	11.9	0.0	0.18	11.3	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
SpoU_methylase	PF00588.14	gi|332796504|ref|YP_004458004.1|	-	5.5e-33	113.8	0.0	7.5e-33	113.3	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|332796504|ref|YP_004458004.1|	-	0.00075	19.0	0.0	0.028	13.9	0.0	2.1	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Ribosomal_S3Ae	PF01015.13	gi|332796505|ref|YP_004458005.1|	-	2.3e-72	242.4	0.8	2.5e-72	242.3	0.5	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
NTP_transferase	PF00483.18	gi|332796506|ref|YP_004458006.1|	-	1.5e-35	122.6	0.0	2e-35	122.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|332796506|ref|YP_004458006.1|	-	6.6e-20	69.6	14.8	6.1e-08	31.8	1.2	4.6	2	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|332796506|ref|YP_004458006.1|	-	3.4e-13	49.9	0.0	5.1e-13	49.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|332796506|ref|YP_004458006.1|	-	2.3e-08	33.8	0.0	4.2e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Hexapep_2	PF14602.1	gi|332796506|ref|YP_004458006.1|	-	0.00023	20.6	10.5	0.037	13.5	0.1	3.6	4	0	0	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
SF3a60_bindingd	PF12108.3	gi|332796506|ref|YP_004458006.1|	-	0.012	15.1	0.5	0.012	15.1	0.4	1.7	2	0	0	2	2	2	0	Splicing	factor	SF3a60	binding	domain
Glycos_transf_2	PF00535.21	gi|332796506|ref|YP_004458006.1|	-	0.021	14.5	0.1	0.034	13.8	0.1	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
CTP_transf_3	PF02348.14	gi|332796506|ref|YP_004458006.1|	-	0.097	12.2	0.0	0.16	11.5	0.0	1.2	1	0	0	1	1	1	0	Cytidylyltransferase
NTP_transf_4	PF13562.1	gi|332796506|ref|YP_004458006.1|	-	0.15	11.7	0.1	3.3	7.3	0.0	2.8	2	1	0	2	2	2	0	Sugar	nucleotidyl	transferase
MMR_HSR1_C	PF08438.5	gi|332796507|ref|YP_004458007.1|	-	9.9e-36	122.2	0.1	1.7e-35	121.5	0.1	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|332796507|ref|YP_004458007.1|	-	7.6e-18	64.5	0.0	2.2e-17	63.0	0.0	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|332796507|ref|YP_004458007.1|	-	6.3e-13	48.3	0.0	1.2e-12	47.5	0.0	1.4	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|332796507|ref|YP_004458007.1|	-	4.2e-06	26.1	0.2	3.1e-05	23.3	0.1	2.3	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.8	gi|332796507|ref|YP_004458007.1|	-	0.00056	19.6	0.1	0.027	14.2	0.0	2.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF933)
Ribosomal_L15e	PF00827.12	gi|332796508|ref|YP_004458008.1|	-	1.5e-72	243.1	6.0	1.5e-72	243.1	4.2	1.2	1	1	0	1	1	1	1	Ribosomal	L15
RNA_binding	PF01877.12	gi|332796509|ref|YP_004458009.1|	-	1.5e-25	89.4	1.8	2.2e-25	89.0	1.3	1.1	1	0	0	1	1	1	1	RNA	binding
RNase_P_p30	PF01876.11	gi|332796510|ref|YP_004458010.1|	-	3.4e-12	45.8	0.2	3.4e-11	42.5	0.1	2.0	1	1	0	1	1	1	1	RNase	P	subunit	p30
RNase_P_Rpp14	PF01900.14	gi|332796511|ref|YP_004458011.1|	-	5.1e-20	71.3	0.1	6.9e-20	70.9	0.1	1.2	1	0	0	1	1	1	1	Rpp14/Pop5	family
Proteasome	PF00227.21	gi|332796512|ref|YP_004458012.1|	-	2.5e-59	199.7	0.0	3.4e-59	199.3	0.0	1.2	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|332796512|ref|YP_004458012.1|	-	3e-13	48.8	0.7	1.1e-12	47.0	0.3	2.1	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
SBDS	PF01172.13	gi|332796513|ref|YP_004458013.1|	-	5.9e-29	99.7	0.1	1.1e-28	98.8	0.1	1.4	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|332796513|ref|YP_004458013.1|	-	1e-22	80.1	1.1	1.5e-22	79.5	0.8	1.2	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|332796513|ref|YP_004458013.1|	-	0.0024	17.6	0.0	0.0055	16.5	0.0	1.5	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
DUF1949	PF09186.6	gi|332796513|ref|YP_004458013.1|	-	0.0035	16.9	0.2	0.25	10.9	0.0	3.1	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF1949)
S1	PF00575.18	gi|332796514|ref|YP_004458014.1|	-	5.9e-05	23.0	0.0	0.00014	21.9	0.0	1.7	1	0	0	1	1	1	1	S1	RNA	binding	domain
KH_1	PF00013.24	gi|332796514|ref|YP_004458014.1|	-	6e-05	22.5	0.3	0.00028	20.4	0.0	2.1	1	1	1	2	2	2	1	KH	domain
DUF2352	PF09817.4	gi|332796514|ref|YP_004458014.1|	-	0.085	11.0	0.0	0.11	10.6	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2352)
RNase_PH	PF01138.16	gi|332796515|ref|YP_004458015.1|	-	8.9e-35	119.8	0.0	1.2e-34	119.5	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|332796515|ref|YP_004458015.1|	-	3.1e-13	49.4	0.1	5.7e-13	48.5	0.1	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
DUF4192	PF13830.1	gi|332796515|ref|YP_004458015.1|	-	0.0047	16.6	0.6	0.006	16.2	0.4	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4192)
RNase_PH	PF01138.16	gi|332796516|ref|YP_004458016.1|	-	4.7e-32	111.0	0.0	8.8e-32	110.1	0.0	1.4	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|332796516|ref|YP_004458016.1|	-	5.5e-10	39.0	0.1	2.7e-09	36.8	0.1	2.1	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
Ribosomal_L37ae	PF01780.14	gi|332796517|ref|YP_004458017.1|	-	3.4e-26	90.9	7.4	3.6e-26	90.8	5.1	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|332796517|ref|YP_004458017.1|	-	0.00039	20.1	4.1	0.0006	19.5	2.8	1.4	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796517|ref|YP_004458017.1|	-	0.0043	16.6	0.7	0.0051	16.4	0.5	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
PHD	PF00628.24	gi|332796517|ref|YP_004458017.1|	-	0.013	15.2	2.9	0.85	9.3	0.1	2.1	2	0	0	2	2	2	0	PHD-finger
RRN7	PF11781.3	gi|332796517|ref|YP_004458017.1|	-	0.013	15.0	1.1	0.02	14.3	0.8	1.4	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
zf-TFIIB	PF13453.1	gi|332796517|ref|YP_004458017.1|	-	0.014	14.5	0.4	0.022	13.9	0.3	1.3	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
DUF4379	PF14311.1	gi|332796517|ref|YP_004458017.1|	-	0.035	13.9	6.5	0.6	9.9	0.3	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
zf-RING_2	PF13639.1	gi|332796517|ref|YP_004458017.1|	-	0.052	13.3	0.3	4	7.3	0.1	2.0	2	0	0	2	2	2	0	Ring	finger	domain
DUF4428	PF14471.1	gi|332796517|ref|YP_004458017.1|	-	0.059	13.1	0.4	0.08	12.7	0.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
TF_Zn_Ribbon	PF08271.7	gi|332796517|ref|YP_004458017.1|	-	0.085	12.1	0.3	0.13	11.5	0.2	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
Endonuclease_7	PF02945.10	gi|332796517|ref|YP_004458017.1|	-	0.086	12.5	1.1	0.19	11.4	0.8	1.6	1	1	1	2	2	2	0	Recombination	endonuclease	VII
zf-Sec23_Sec24	PF04810.10	gi|332796517|ref|YP_004458017.1|	-	0.1	12.1	0.5	6.6	6.3	0.0	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
Unstab_antitox	PF09720.5	gi|332796517|ref|YP_004458017.1|	-	0.13	12.0	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	Putative	addiction	module	component
DUF1610	PF07754.6	gi|332796517|ref|YP_004458017.1|	-	0.15	12.1	1.8	0.82	9.8	0.1	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Zn_ribbon_recom	PF13408.1	gi|332796517|ref|YP_004458017.1|	-	0.16	12.2	3.5	8.1	6.7	0.1	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
CpXC	PF14353.1	gi|332796517|ref|YP_004458017.1|	-	0.17	11.8	1.7	0.29	11.0	0.2	1.7	1	1	2	3	3	3	0	CpXC	protein
zf-C3HC4_2	PF13923.1	gi|332796517|ref|YP_004458017.1|	-	0.2	11.7	2.4	2.6	8.1	1.9	2.0	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Prim_Zn_Ribbon	PF08273.7	gi|332796517|ref|YP_004458017.1|	-	0.39	10.8	4.0	2	8.5	2.8	2.0	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-H2C2_2	PF13465.1	gi|332796517|ref|YP_004458017.1|	-	0.46	10.8	2.2	3.4	8.1	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
zinc_ribbon_5	PF13719.1	gi|332796517|ref|YP_004458017.1|	-	0.57	9.8	3.7	10	5.8	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Rep_fac-A_C	PF08646.5	gi|332796517|ref|YP_004458017.1|	-	0.8	9.4	3.9	2.5	7.8	2.7	1.7	1	1	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zinc_ribbon_4	PF13717.1	gi|332796517|ref|YP_004458017.1|	-	0.96	9.1	4.3	9.4	6.0	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332796517|ref|YP_004458017.1|	-	3.2	7.4	5.9	19	5.0	1.4	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Pcc1	PF09341.5	gi|332796518|ref|YP_004458018.1|	-	0.00099	19.1	0.0	0.0014	18.6	0.0	1.4	1	1	0	1	1	1	1	Transcription	factor	Pcc1
Prefoldin_2	PF01920.15	gi|332796519|ref|YP_004458019.1|	-	5.2e-24	84.0	13.1	5.9e-24	83.8	9.1	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
UPF0449	PF15136.1	gi|332796519|ref|YP_004458019.1|	-	0.00028	21.0	1.2	0.00028	21.0	0.9	1.8	1	1	1	2	2	2	1	Uncharacterised	protein	family	UPF0449
UBN2	PF14223.1	gi|332796519|ref|YP_004458019.1|	-	0.00065	19.4	4.0	0.004	16.9	0.5	2.2	1	1	1	2	2	2	1	gag-polypeptide	of	LTR	copia-type
DUF87	PF01935.12	gi|332796519|ref|YP_004458019.1|	-	0.018	14.8	4.1	0.023	14.5	2.9	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
Tctex-1	PF03645.8	gi|332796519|ref|YP_004458019.1|	-	0.027	14.3	0.6	0.035	13.9	0.3	1.4	1	1	0	1	1	1	0	Tctex-1	family
CENP-F_leu_zip	PF10473.4	gi|332796519|ref|YP_004458019.1|	-	0.028	14.2	0.6	0.028	14.2	0.4	2.2	2	1	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Laminin_II	PF06009.7	gi|332796519|ref|YP_004458019.1|	-	0.061	13.0	6.0	0.2	11.4	0.3	2.1	1	1	1	2	2	2	0	Laminin	Domain	II
DUF1870	PF08965.5	gi|332796519|ref|YP_004458019.1|	-	0.11	12.1	1.1	6.7	6.4	0.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1870)
DUF424	PF04242.8	gi|332796519|ref|YP_004458019.1|	-	0.11	12.5	0.1	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF424)
Lip_prot_lig_C	PF10437.4	gi|332796519|ref|YP_004458019.1|	-	0.14	11.8	0.8	1.5	8.5	0.2	2.3	2	0	0	2	2	2	0	Bacterial	lipoate	protein	ligase	C-terminus
ASL_C	PF08328.6	gi|332796519|ref|YP_004458019.1|	-	0.25	11.2	3.2	2.3	8.0	0.1	2.1	1	1	1	2	2	2	0	Adenylosuccinate	lyase	C-terminal
CDC37_N	PF03234.9	gi|332796519|ref|YP_004458019.1|	-	0.28	11.4	3.8	0.57	10.4	2.6	1.5	1	1	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
Syntaxin-6_N	PF09177.6	gi|332796519|ref|YP_004458019.1|	-	0.34	11.3	5.2	4.1	7.8	0.3	2.3	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
MitMem_reg	PF13012.1	gi|332796519|ref|YP_004458019.1|	-	0.39	10.8	4.4	0.88	9.6	3.0	1.6	1	1	0	1	1	1	0	Maintenance	of	mitochondrial	structure	and	function
Spectrin	PF00435.16	gi|332796519|ref|YP_004458019.1|	-	0.41	10.9	4.5	1.1	9.5	0.3	2.2	2	0	0	2	2	2	0	Spectrin	repeat
NPV_P10	PF05531.7	gi|332796519|ref|YP_004458019.1|	-	0.42	10.8	7.6	0.25	11.5	1.6	2.4	1	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Nup54	PF13874.1	gi|332796519|ref|YP_004458019.1|	-	0.45	10.1	6.9	1.6	8.4	1.4	2.2	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
FlaC_arch	PF05377.6	gi|332796519|ref|YP_004458019.1|	-	0.55	10.1	9.3	0.56	10.1	0.9	2.7	2	2	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
FliD_C	PF07195.7	gi|332796519|ref|YP_004458019.1|	-	1.1	8.5	5.8	0.44	9.8	0.7	1.9	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
Cortex-I_coil	PF09304.5	gi|332796519|ref|YP_004458019.1|	-	1.5	8.8	9.9	3.3	7.7	1.7	2.1	2	0	0	2	2	2	0	Cortexillin	I,	coiled	coil
Prefoldin	PF02996.12	gi|332796519|ref|YP_004458019.1|	-	2.9	7.5	7.8	3.6	7.2	0.3	2.3	1	1	0	2	2	2	0	Prefoldin	subunit
Baculo_PEP_C	PF04513.7	gi|332796519|ref|YP_004458019.1|	-	5.1	6.9	6.9	1.7e+02	2.0	4.9	2.1	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF972	PF06156.8	gi|332796519|ref|YP_004458019.1|	-	8.4	6.8	6.8	1.1e+02	3.1	4.7	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
XkdW	PF09636.5	gi|332796519|ref|YP_004458019.1|	-	8.6	6.2	6.8	3.1	7.6	0.6	2.3	1	1	0	2	2	2	0	XkdW	protein
DUF3552	PF12072.3	gi|332796519|ref|YP_004458019.1|	-	9.5	5.3	15.4	6.2	5.9	1.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3552)
ERCC4	PF02732.10	gi|332796520|ref|YP_004458020.1|	-	2e-28	98.9	0.7	3.2e-28	98.2	0.5	1.3	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|332796520|ref|YP_004458020.1|	-	1.4e-05	24.9	0.0	4.3e-05	23.3	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|332796520|ref|YP_004458020.1|	-	0.001	19.2	0.0	0.0038	17.3	0.0	2.0	1	1	1	2	2	2	1	Helix-hairpin-helix	domain
Z1	PF10593.4	gi|332796520|ref|YP_004458020.1|	-	0.0027	16.9	0.4	0.0058	15.8	0.1	1.6	1	1	1	2	2	2	1	Z1	domain
5_3_exonuc	PF01367.15	gi|332796520|ref|YP_004458020.1|	-	0.014	15.6	0.0	0.045	13.9	0.0	1.8	1	0	0	1	1	1	0	5'-3'	exonuclease,	C-terminal	SAM	fold
Endonuc-MspI	PF09208.5	gi|332796520|ref|YP_004458020.1|	-	0.021	13.8	1.8	0.024	13.7	0.5	1.6	1	1	1	2	2	2	0	Restriction	endonuclease	MspI
DUF2164	PF09932.4	gi|332796520|ref|YP_004458020.1|	-	0.04	13.7	0.1	0.097	12.4	0.0	1.7	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2164)
Flavodoxin_1	PF00258.20	gi|332796520|ref|YP_004458020.1|	-	0.15	12.0	0.0	0.22	11.5	0.0	1.4	1	0	0	1	1	1	0	Flavodoxin
GTP_EFTU	PF00009.22	gi|332796521|ref|YP_004458021.1|	-	1.3e-58	197.5	0.3	2.3e-58	196.7	0.2	1.4	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|332796521|ref|YP_004458021.1|	-	3.4e-33	113.7	0.0	2.8e-32	110.8	0.0	2.6	4	0	0	4	4	4	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|332796521|ref|YP_004458021.1|	-	4.2e-24	84.1	0.1	1.2e-23	82.7	0.0	1.8	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|332796521|ref|YP_004458021.1|	-	1.9e-20	72.4	0.0	5.5e-20	71.0	0.0	1.9	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|332796521|ref|YP_004458021.1|	-	1.4e-13	50.7	0.7	4.7e-13	49.0	0.0	2.3	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|332796521|ref|YP_004458021.1|	-	0.00032	20.6	0.1	0.00082	19.3	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
G-alpha	PF00503.15	gi|332796521|ref|YP_004458021.1|	-	0.097	11.3	0.6	0.4	9.3	0.0	1.9	2	0	0	2	2	2	0	G-protein	alpha	subunit
HAD_2	PF13419.1	gi|332796522|ref|YP_004458022.1|	-	2e-19	70.4	0.0	2.6e-19	70.1	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|332796522|ref|YP_004458022.1|	-	3.1e-14	53.9	0.0	3.6e-14	53.7	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|332796522|ref|YP_004458022.1|	-	3.7e-10	39.3	0.0	6.9e-10	38.5	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|332796522|ref|YP_004458022.1|	-	0.0015	18.7	0.0	0.0022	18.2	0.0	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|332796522|ref|YP_004458022.1|	-	0.012	15.5	0.0	0.032	14.1	0.0	1.9	1	1	1	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
DUF3970	PF13113.1	gi|332796522|ref|YP_004458022.1|	-	0.019	14.6	0.2	0.049	13.3	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3970)
Peptidase_M28	PF04389.12	gi|332796523|ref|YP_004458023.1|	-	1.7e-07	31.1	0.0	6.1e-07	29.3	0.0	1.9	1	1	0	1	1	1	1	Peptidase	family	M28
DUF447	PF04289.7	gi|332796524|ref|YP_004458024.1|	-	5.6e-34	117.2	0.2	6.7e-34	116.9	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Iso_dh	PF00180.15	gi|332796525|ref|YP_004458025.1|	-	2.3e-98	329.3	0.8	2.7e-98	329.1	0.5	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PdxA	PF04166.7	gi|332796525|ref|YP_004458025.1|	-	0.0091	15.2	0.0	0.016	14.3	0.0	1.4	1	0	0	1	1	1	1	Pyridoxal	phosphate	biosynthetic	protein	PdxA
tRNA-synt_1	PF00133.17	gi|332796526|ref|YP_004458026.1|	-	2e-188	627.2	3.0	2.6e-188	626.8	2.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|332796526|ref|YP_004458026.1|	-	7.8e-28	97.1	0.6	2e-27	95.8	0.4	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|332796526|ref|YP_004458026.1|	-	1.2e-22	80.1	5.6	8.2e-08	31.2	0.0	4.5	4	1	0	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|332796526|ref|YP_004458026.1|	-	0.00013	21.3	1.3	0.00046	19.5	0.1	2.4	3	0	0	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
Rpr2	PF04032.11	gi|332796526|ref|YP_004458026.1|	-	0.22	11.4	0.1	3.6	7.5	0.0	2.9	2	1	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Zn-ribbon_8	PF09723.5	gi|332796526|ref|YP_004458026.1|	-	0.25	11.3	0.4	1.3	9.0	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Methyltrn_RNA_3	PF02598.12	gi|332796527|ref|YP_004458027.1|	-	6.8e-24	84.7	0.9	2.2e-22	79.7	0.6	2.4	1	1	0	1	1	1	1	Putative	RNA	methyltransferase
Ribosomal_L3	PF00297.17	gi|332796528|ref|YP_004458028.1|	-	1.6e-56	191.6	0.0	1.9e-56	191.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L3
EcoR124_C	PF12008.3	gi|332796528|ref|YP_004458028.1|	-	0.0011	18.2	0.1	0.0015	17.7	0.1	1.1	1	0	0	1	1	1	1	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
Ribosomal_L4	PF00573.17	gi|332796529|ref|YP_004458029.1|	-	1.6e-37	128.7	0.0	1.9e-37	128.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L12	PF00542.14	gi|332796529|ref|YP_004458029.1|	-	0.057	13.4	1.7	0.093	12.7	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	L7/L12	C-terminal	domain
ETRAMP	PF09716.5	gi|332796529|ref|YP_004458029.1|	-	0.1	12.5	0.0	0.22	11.4	0.0	1.6	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Ribosomal_L23	PF00276.15	gi|332796530|ref|YP_004458030.1|	-	7.6e-14	51.4	6.1	1.1e-13	50.9	4.2	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L23
TroA	PF01297.12	gi|332796530|ref|YP_004458030.1|	-	0.048	12.9	0.8	0.055	12.7	0.5	1.1	1	0	0	1	1	1	0	Periplasmic	solute	binding	protein	family
Fe-ADH_2	PF13685.1	gi|332796530|ref|YP_004458030.1|	-	0.069	12.4	0.6	0.071	12.4	0.4	1.0	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
Ribosomal_L2_C	PF03947.13	gi|332796531|ref|YP_004458031.1|	-	3e-42	143.4	1.4	9.8e-42	141.8	0.5	1.9	1	1	1	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|332796531|ref|YP_004458031.1|	-	4.6e-12	45.7	0.1	4.6e-12	45.7	0.1	1.7	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_S19	PF00203.16	gi|332796532|ref|YP_004458032.1|	-	4.2e-26	90.3	0.6	5.5e-26	89.9	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
MerR_1	PF13411.1	gi|332796532|ref|YP_004458032.1|	-	0.0087	15.8	0.5	0.026	14.2	0.2	1.8	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
RNA_pol_Rpb2_4	PF04566.8	gi|332796532|ref|YP_004458032.1|	-	0.022	14.5	0.9	0.034	13.9	0.4	1.5	1	1	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	4
bZIP_Maf	PF03131.12	gi|332796532|ref|YP_004458032.1|	-	0.058	13.6	1.2	0.11	12.8	0.8	1.4	1	0	0	1	1	1	0	bZIP	Maf	transcription	factor
Ribosomal_L22	PF00237.14	gi|332796533|ref|YP_004458033.1|	-	4.7e-34	116.4	0.2	5.4e-34	116.2	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S3_C	PF00189.15	gi|332796534|ref|YP_004458034.1|	-	7.5e-17	61.3	0.4	1.8e-16	60.1	0.3	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|332796534|ref|YP_004458034.1|	-	8.4e-16	57.2	0.0	1.7e-15	56.3	0.0	1.5	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|332796534|ref|YP_004458034.1|	-	0.0043	16.6	0.7	0.025	14.2	0.1	2.5	2	0	0	2	2	2	1	KH	domain
RteC	PF09357.5	gi|332796534|ref|YP_004458034.1|	-	0.0083	15.9	0.0	0.015	15.2	0.0	1.4	1	0	0	1	1	1	1	RteC	protein
KH_1	PF00013.24	gi|332796534|ref|YP_004458034.1|	-	0.0084	15.7	2.3	0.01	15.4	0.1	2.3	3	0	0	3	3	3	1	KH	domain
KH_4	PF13083.1	gi|332796534|ref|YP_004458034.1|	-	0.06	13.0	0.0	0.17	11.5	0.0	1.9	1	0	0	1	1	1	0	KH	domain
Ribosomal_L29	PF00831.18	gi|332796535|ref|YP_004458035.1|	-	4.7e-21	74.2	1.3	5.7e-21	73.9	0.9	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
Peptidase_C12	PF01088.16	gi|332796535|ref|YP_004458035.1|	-	0.11	11.6	0.3	0.12	11.5	0.2	1.1	1	0	0	1	1	1	0	Ubiquitin	carboxyl-terminal	hydrolase,	family	1
Plasmodium_Vir	PF05795.6	gi|332796535|ref|YP_004458035.1|	-	0.15	11.2	3.4	0.19	10.9	2.4	1.1	1	0	0	1	1	1	0	Plasmodium	vivax	Vir	protein
Flavi_capsid	PF01003.14	gi|332796535|ref|YP_004458035.1|	-	0.18	11.3	1.2	0.22	11.1	0.8	1.2	1	0	0	1	1	1	0	Flavivirus	capsid	protein	C
UPF0086	PF01868.11	gi|332796536|ref|YP_004458036.1|	-	3.9e-15	55.2	0.0	4.5e-15	55.0	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_S17	PF00366.15	gi|332796537|ref|YP_004458037.1|	-	1e-17	63.9	0.3	1.3e-17	63.5	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S17
zf-C3H1	PF10650.4	gi|332796537|ref|YP_004458037.1|	-	0.34	10.4	1.7	0.58	9.6	1.2	1.4	1	0	0	1	1	1	0	Putative	zinc-finger	domain
Ribosomal_L14	PF00238.14	gi|332796538|ref|YP_004458038.1|	-	1.8e-38	131.0	0.0	2e-38	130.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
PAS_3	PF08447.6	gi|332796538|ref|YP_004458038.1|	-	0.042	13.9	0.0	0.073	13.1	0.0	1.4	1	0	0	1	1	1	0	PAS	fold
KOW	PF00467.24	gi|332796539|ref|YP_004458039.1|	-	2.1e-07	30.3	1.8	5.8e-07	28.9	1.3	1.8	1	0	0	1	1	1	1	KOW	motif
SH3_2	PF07653.12	gi|332796539|ref|YP_004458039.1|	-	0.073	12.5	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Variant	SH3	domain
Ribosomal_S4e	PF00900.15	gi|332796540|ref|YP_004458040.1|	-	3.1e-26	90.8	0.9	6.7e-26	89.7	0.1	2.0	2	0	0	2	2	2	1	Ribosomal	family	S4e
S4	PF01479.20	gi|332796540|ref|YP_004458040.1|	-	1.2e-10	40.6	0.1	4.7e-10	38.7	0.0	2.1	2	0	0	2	2	2	1	S4	domain
RS4NT	PF08071.7	gi|332796540|ref|YP_004458040.1|	-	5.6e-09	35.7	3.0	1e-08	34.8	2.1	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4_2	PF13275.1	gi|332796540|ref|YP_004458040.1|	-	0.024	14.2	0.1	0.12	11.9	0.0	2.2	3	0	0	3	3	3	0	S4	domain
Ribosomal_L5_C	PF00673.16	gi|332796541|ref|YP_004458041.1|	-	5.4e-26	90.1	0.0	2e-25	88.3	0.0	1.8	2	0	0	2	2	2	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|332796541|ref|YP_004458041.1|	-	3.2e-22	78.0	0.1	5.7e-22	77.2	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S14	PF00253.16	gi|332796542|ref|YP_004458042.1|	-	2e-16	59.0	2.9	2.2e-16	58.9	2.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
Ribosomal_L37ae	PF01780.14	gi|332796542|ref|YP_004458042.1|	-	0.011	15.5	0.3	0.014	15.2	0.2	1.2	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
A2L_zn_ribbon	PF08792.5	gi|332796542|ref|YP_004458042.1|	-	0.063	12.7	1.8	0.087	12.3	1.2	1.2	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
zf-P11	PF03854.9	gi|332796542|ref|YP_004458042.1|	-	0.1	12.1	0.3	0.13	11.7	0.2	1.2	1	0	0	1	1	1	0	P-11	zinc	finger
RNA_POL_M_15KD	PF02150.11	gi|332796542|ref|YP_004458042.1|	-	0.12	12.1	1.6	1.3	8.7	0.1	2.2	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.2	gi|332796542|ref|YP_004458042.1|	-	0.18	11.6	2.7	0.24	11.2	1.9	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|332796542|ref|YP_004458042.1|	-	0.3	10.7	4.9	1.4	8.6	3.4	1.9	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Prim_Zn_Ribbon	PF08273.7	gi|332796542|ref|YP_004458042.1|	-	2	8.5	5.1	3	7.9	0.5	2.1	1	1	1	2	2	2	0	Zinc-binding	domain	of	primase-helicase
Ribosomal_S8	PF00410.14	gi|332796543|ref|YP_004458043.1|	-	3.6e-25	88.2	0.0	4.8e-25	87.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_L6	PF00347.18	gi|332796544|ref|YP_004458044.1|	-	3.1e-27	94.8	9.0	5.7e-15	55.5	1.0	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
DNA_pol3_beta	PF00712.14	gi|332796544|ref|YP_004458044.1|	-	0.011	15.5	1.0	1.3	8.8	0.0	2.2	2	0	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
DUF2196	PF09962.4	gi|332796544|ref|YP_004458044.1|	-	0.044	13.5	0.6	0.36	10.6	0.0	2.5	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2196)
YbbR	PF07949.7	gi|332796544|ref|YP_004458044.1|	-	0.081	13.0	4.7	3.2	7.9	0.1	2.7	2	1	1	3	3	3	0	YbbR-like	protein
DNA_ligase_OB	PF03120.11	gi|332796544|ref|YP_004458044.1|	-	0.11	12.1	1.2	0.42	10.3	0.5	2.0	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	OB-fold	domain
RNA_bind_2	PF10133.4	gi|332796544|ref|YP_004458044.1|	-	2.7	8.0	5.7	1.5	8.8	1.0	2.6	2	1	1	3	3	3	0	Predicted	RNA-binding	protein
Ribosomal_L32e	PF01655.13	gi|332796545|ref|YP_004458045.1|	-	2.7e-35	120.7	0.1	3.4e-35	120.4	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
DUF1436	PF07262.6	gi|332796545|ref|YP_004458045.1|	-	0.07	12.6	0.7	0.1	12.0	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1436)
Ribosomal_L19e	PF01280.15	gi|332796546|ref|YP_004458046.1|	-	6.9e-47	158.9	10.4	7.7e-47	158.7	7.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
ATP-synt_B	PF00430.13	gi|332796546|ref|YP_004458046.1|	-	0.094	12.5	3.9	0.14	11.9	2.7	1.2	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
PaaX	PF07848.7	gi|332796546|ref|YP_004458046.1|	-	0.12	12.3	0.4	0.32	11.0	0.0	1.9	1	1	1	2	2	2	0	PaaX-like	protein
Ribosomal_L18p	PF00861.17	gi|332796547|ref|YP_004458047.1|	-	3.5e-34	117.5	0.1	4.7e-34	117.1	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|332796547|ref|YP_004458047.1|	-	6.8e-12	45.7	0.0	1e-11	45.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_S5_C	PF03719.10	gi|332796548|ref|YP_004458048.1|	-	5.2e-23	80.1	0.0	1e-22	79.1	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|332796548|ref|YP_004458048.1|	-	2.4e-22	78.4	1.1	4.5e-22	77.5	0.7	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_L18e	PF00828.14	gi|332796550|ref|YP_004458050.1|	-	2.6e-28	98.9	1.8	3.5e-28	98.5	1.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
SecY	PF00344.15	gi|332796551|ref|YP_004458051.1|	-	1.9e-80	270.4	34.1	1.9e-80	270.4	23.7	1.3	2	0	0	2	2	2	1	SecY	translocase
Plug_translocon	PF10559.4	gi|332796551|ref|YP_004458051.1|	-	3.3e-10	39.2	1.2	1.4e-09	37.2	0.9	2.2	1	0	0	1	1	1	1	Plug	domain	of	Sec61p
AAA_18	PF13238.1	gi|332796552|ref|YP_004458052.1|	-	1.4e-11	44.7	0.1	1.9e-11	44.3	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332796552|ref|YP_004458052.1|	-	5.1e-07	30.5	0.0	8.5e-07	29.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
ATP_bind_1	PF03029.12	gi|332796552|ref|YP_004458052.1|	-	0.00013	21.6	0.0	0.00019	21.0	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
NTPase_1	PF03266.10	gi|332796552|ref|YP_004458052.1|	-	0.00013	21.7	0.0	0.00021	21.0	0.0	1.4	1	0	0	1	1	1	1	NTPase
SRP54	PF00448.17	gi|332796552|ref|YP_004458052.1|	-	0.0017	17.8	0.0	0.0022	17.4	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.12	gi|332796552|ref|YP_004458052.1|	-	0.0028	17.0	0.1	1.6	8.0	0.0	2.4	2	1	0	2	2	2	2	Thymidylate	kinase
AAA_28	PF13521.1	gi|332796552|ref|YP_004458052.1|	-	0.004	17.1	0.0	0.0068	16.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|332796552|ref|YP_004458052.1|	-	0.006	16.3	0.0	0.01	15.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
KTI12	PF08433.5	gi|332796552|ref|YP_004458052.1|	-	0.0067	15.6	0.0	0.0084	15.3	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_22	PF13401.1	gi|332796552|ref|YP_004458052.1|	-	0.012	15.7	0.4	0.018	15.2	0.3	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|332796552|ref|YP_004458052.1|	-	0.013	15.2	0.1	0.034	13.8	0.0	1.7	2	0	0	2	2	2	0	Part	of	AAA	domain
ArgK	PF03308.11	gi|332796552|ref|YP_004458052.1|	-	0.015	14.1	0.1	0.028	13.1	0.1	1.5	1	0	0	1	1	1	0	ArgK	protein
DUF2075	PF09848.4	gi|332796552|ref|YP_004458052.1|	-	0.015	14.3	0.0	0.018	14.0	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA	PF00004.24	gi|332796552|ref|YP_004458052.1|	-	0.031	14.4	0.0	0.054	13.6	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|332796552|ref|YP_004458052.1|	-	0.033	13.7	0.0	0.054	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|332796552|ref|YP_004458052.1|	-	0.043	13.7	0.1	0.078	12.8	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|332796552|ref|YP_004458052.1|	-	0.047	13.1	0.1	0.11	11.9	0.0	1.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|332796552|ref|YP_004458052.1|	-	0.055	13.4	0.0	0.1	12.5	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
Viral_helicase1	PF01443.13	gi|332796552|ref|YP_004458052.1|	-	0.092	12.2	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
MobB	PF03205.9	gi|332796552|ref|YP_004458052.1|	-	0.1	12.3	0.5	0.37	10.5	0.1	2.0	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_21	PF13304.1	gi|332796553|ref|YP_004458053.1|	-	0.58	10.0	11.2	0.69	9.8	7.8	1.1	1	0	0	1	1	1	0	AAA	domain
Pox_D5	PF03288.11	gi|332796553|ref|YP_004458053.1|	-	0.88	9.8	4.3	1.3	9.3	3.0	1.2	1	0	0	1	1	1	0	Poxvirus	D5	protein-like
Ctr	PF04145.10	gi|332796553|ref|YP_004458053.1|	-	3.8	7.5	6.5	8	6.5	4.5	1.6	1	1	0	1	1	1	0	Ctr	copper	transporter	family
Ribosomal_L34e	PF01199.13	gi|332796554|ref|YP_004458054.1|	-	7e-24	83.8	0.9	7.6e-24	83.7	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
DUF4428	PF14471.1	gi|332796554|ref|YP_004458054.1|	-	0.0026	17.4	0.5	1.7	8.4	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4428)
Zn_ribbon_recom	PF13408.1	gi|332796554|ref|YP_004458054.1|	-	0.0078	16.4	0.5	0.011	15.9	0.3	1.4	1	0	0	1	1	1	1	Recombinase	zinc	beta	ribbon	domain
FYVE	PF01363.16	gi|332796554|ref|YP_004458054.1|	-	0.048	13.5	1.5	0.11	12.3	1.1	1.6	1	1	0	1	1	1	0	FYVE	zinc	finger
Viral_NABP	PF05515.6	gi|332796554|ref|YP_004458054.1|	-	0.067	13.4	0.6	0.091	13.0	0.4	1.3	1	0	0	1	1	1	0	Viral	nucleic	acid	binding
Auto_anti-p27	PF06677.7	gi|332796554|ref|YP_004458054.1|	-	0.069	12.9	0.2	0.17	11.6	0.0	1.7	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Cytidylate_kin2	PF13189.1	gi|332796555|ref|YP_004458055.1|	-	3.2e-21	76.0	1.1	1.5e-19	70.5	0.7	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|332796555|ref|YP_004458055.1|	-	1.9e-19	70.2	0.7	2.6e-19	69.7	0.5	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332796555|ref|YP_004458055.1|	-	1.3e-13	51.7	0.8	1.9e-13	51.2	0.6	1.4	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|332796555|ref|YP_004458055.1|	-	5.1e-08	32.9	1.0	1.1e-07	31.8	0.7	1.7	1	1	0	1	1	1	1	Shikimate	kinase
ADK	PF00406.17	gi|332796555|ref|YP_004458055.1|	-	7e-06	25.9	0.0	9.3e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Adenylate	kinase
AAA_33	PF13671.1	gi|332796555|ref|YP_004458055.1|	-	2.4e-05	24.2	0.0	3.6e-05	23.6	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|332796555|ref|YP_004458055.1|	-	2.6e-05	24.4	0.1	8.5e-05	22.7	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|332796555|ref|YP_004458055.1|	-	7e-05	22.8	0.0	0.00011	22.1	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|332796555|ref|YP_004458055.1|	-	7.2e-05	22.2	0.1	0.018	14.3	0.1	2.3	2	1	0	2	2	2	1	Thymidylate	kinase
CoaE	PF01121.15	gi|332796555|ref|YP_004458055.1|	-	0.00012	21.5	0.1	0.0089	15.4	0.0	2.2	1	1	1	2	2	2	1	Dephospho-CoA	kinase
PRK	PF00485.13	gi|332796555|ref|YP_004458055.1|	-	0.00012	21.6	0.0	0.0002	21.0	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_22	PF13401.1	gi|332796555|ref|YP_004458055.1|	-	0.00017	21.7	0.0	0.0003	20.9	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|332796555|ref|YP_004458055.1|	-	0.00036	20.8	0.0	0.00043	20.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_19	PF13245.1	gi|332796555|ref|YP_004458055.1|	-	0.00077	19.1	0.0	0.0013	18.4	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
Rad17	PF03215.10	gi|332796555|ref|YP_004458055.1|	-	0.0013	17.5	0.0	0.0016	17.2	0.0	1.3	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
T2SE	PF00437.15	gi|332796555|ref|YP_004458055.1|	-	0.0015	17.4	0.2	0.0047	15.8	0.1	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_16	PF13191.1	gi|332796555|ref|YP_004458055.1|	-	0.0016	18.4	0.1	0.0019	18.2	0.1	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
Cytidylate_kin	PF02224.13	gi|332796555|ref|YP_004458055.1|	-	0.0029	17.0	0.0	0.005	16.2	0.0	1.4	1	1	0	1	1	1	1	Cytidylate	kinase
APS_kinase	PF01583.15	gi|332796555|ref|YP_004458055.1|	-	0.0041	16.7	0.0	0.0051	16.4	0.0	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
NTPase_1	PF03266.10	gi|332796555|ref|YP_004458055.1|	-	0.0048	16.6	0.0	0.0066	16.1	0.0	1.3	1	0	0	1	1	1	1	NTPase
AAA_14	PF13173.1	gi|332796555|ref|YP_004458055.1|	-	0.0049	16.7	0.2	0.01	15.7	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|332796555|ref|YP_004458055.1|	-	0.0057	16.3	0.0	0.0086	15.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.9	gi|332796555|ref|YP_004458055.1|	-	0.0095	15.6	0.6	0.017	14.8	0.1	1.7	2	0	0	2	2	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
RNA_helicase	PF00910.17	gi|332796555|ref|YP_004458055.1|	-	0.0098	16.0	0.1	0.022	14.9	0.0	1.7	1	1	0	1	1	1	1	RNA	helicase
AAA_30	PF13604.1	gi|332796555|ref|YP_004458055.1|	-	0.013	15.1	0.4	0.4	10.2	0.1	2.1	1	1	1	2	2	2	0	AAA	domain
RuvB_N	PF05496.7	gi|332796555|ref|YP_004458055.1|	-	0.016	14.2	0.0	0.025	13.6	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_24	PF13479.1	gi|332796555|ref|YP_004458055.1|	-	0.024	14.1	0.3	0.041	13.4	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
Guanylate_kin	PF00625.16	gi|332796555|ref|YP_004458055.1|	-	0.025	14.0	1.0	0.15	11.4	0.0	2.3	1	1	1	2	2	2	0	Guanylate	kinase
Zeta_toxin	PF06414.7	gi|332796555|ref|YP_004458055.1|	-	0.026	13.6	0.1	0.035	13.2	0.1	1.4	1	1	0	1	1	1	0	Zeta	toxin
Viral_helicase1	PF01443.13	gi|332796555|ref|YP_004458055.1|	-	0.032	13.7	0.0	0.046	13.2	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
SRP54	PF00448.17	gi|332796555|ref|YP_004458055.1|	-	0.035	13.5	0.5	0.55	9.6	0.0	2.1	1	1	1	2	2	2	0	SRP54-type	protein,	GTPase	domain
NACHT	PF05729.7	gi|332796555|ref|YP_004458055.1|	-	0.037	13.6	0.0	0.068	12.8	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
Arch_ATPase	PF01637.13	gi|332796555|ref|YP_004458055.1|	-	0.047	13.3	0.4	0.066	12.8	0.3	1.5	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_29	PF13555.1	gi|332796555|ref|YP_004458055.1|	-	0.061	12.8	0.4	0.14	11.7	0.3	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.1	gi|332796555|ref|YP_004458055.1|	-	0.063	13.2	6.4	0.22	11.4	4.4	1.9	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.5	gi|332796555|ref|YP_004458055.1|	-	0.071	12.3	0.0	0.12	11.5	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
UPF0079	PF02367.12	gi|332796555|ref|YP_004458055.1|	-	0.073	12.7	0.0	0.16	11.6	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_2	PF07724.9	gi|332796555|ref|YP_004458055.1|	-	0.077	12.9	0.1	0.099	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
Sigma54_activ_2	PF14532.1	gi|332796555|ref|YP_004458055.1|	-	0.088	12.8	0.0	0.15	12.0	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
DUF258	PF03193.11	gi|332796555|ref|YP_004458055.1|	-	0.089	11.9	0.0	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|332796555|ref|YP_004458055.1|	-	0.091	12.1	0.6	0.17	11.3	0.1	1.5	1	1	0	1	1	1	0	AAA-like	domain
IstB_IS21	PF01695.12	gi|332796555|ref|YP_004458055.1|	-	0.099	12.0	0.0	0.15	11.4	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
CPT	PF07931.7	gi|332796555|ref|YP_004458055.1|	-	0.11	12.1	0.0	0.15	11.7	0.0	1.3	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
CbiA	PF01656.18	gi|332796555|ref|YP_004458055.1|	-	0.12	11.8	0.4	0.25	10.7	0.1	1.7	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_23	PF13476.1	gi|332796555|ref|YP_004458055.1|	-	0.4	10.9	7.5	4.1	7.6	5.2	2.2	1	1	0	1	1	1	0	AAA	domain
Archease	PF01951.11	gi|332796558|ref|YP_004458058.1|	-	4.6e-44	149.7	0.7	5.1e-44	149.5	0.5	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
Mu-transpos_C	PF09299.6	gi|332796558|ref|YP_004458058.1|	-	0.066	13.0	0.0	0.38	10.6	0.0	2.2	1	1	0	1	1	1	0	Mu	transposase,	C-terminal
TPR_2	PF07719.12	gi|332796559|ref|YP_004458059.1|	-	0.17	11.8	0.6	1	9.4	0.1	2.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|332796559|ref|YP_004458059.1|	-	0.33	10.6	1.4	3.7	7.3	0.2	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
NAD_binding_8	PF13450.1	gi|332796561|ref|YP_004458061.1|	-	0.00013	21.8	0.0	0.00024	21.0	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Hydrophob_seed	PF14547.1	gi|332796562|ref|YP_004458062.1|	-	0.16	11.8	0.1	0.3	11.0	0.0	1.4	1	0	0	1	1	1	0	Hydrophobic	seed	protein
zf-C2H2_4	PF13894.1	gi|332796563|ref|YP_004458063.1|	-	0.018	15.3	0.6	0.041	14.2	0.4	1.6	1	1	0	1	1	1	0	C2H2-type	zinc	finger
Glyco_hydro_56	PF01630.13	gi|332796563|ref|YP_004458063.1|	-	0.041	12.5	0.0	0.05	12.2	0.0	1.1	1	0	0	1	1	1	0	Hyaluronidase
SIS	PF01380.17	gi|332796564|ref|YP_004458064.1|	-	8e-17	61.0	0.1	1.4e-16	60.2	0.0	1.3	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|332796564|ref|YP_004458064.1|	-	2.1e-08	33.9	2.5	2.6e-06	27.1	0.2	2.3	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|332796564|ref|YP_004458064.1|	-	0.062	12.1	0.9	0.81	8.5	0.1	2.0	1	1	1	2	2	2	0	PRMT5	arginine-N-methyltransferase
AAA_10	PF12846.2	gi|332796565|ref|YP_004458065.1|	-	1.8e-20	73.6	0.2	6.9e-20	71.6	0.2	1.9	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|332796565|ref|YP_004458065.1|	-	3.1e-06	25.8	0.0	0.011	14.1	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|332796565|ref|YP_004458065.1|	-	3.7e-06	25.8	0.0	0.00092	17.9	0.0	2.2	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|332796565|ref|YP_004458065.1|	-	2.4e-05	23.9	0.0	0.00037	20.0	0.0	2.2	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
DUF87	PF01935.12	gi|332796565|ref|YP_004458065.1|	-	0.00066	19.5	0.5	0.00066	19.5	0.4	2.0	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
Arch_ATPase	PF01637.13	gi|332796565|ref|YP_004458065.1|	-	0.001	18.8	1.8	0.019	14.6	1.2	2.3	1	1	0	1	1	1	1	Archaeal	ATPase
T4SS-DNA_transf	PF02534.9	gi|332796565|ref|YP_004458065.1|	-	0.0025	16.4	0.2	0.08	11.5	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
ResIII	PF04851.10	gi|332796565|ref|YP_004458065.1|	-	0.0063	16.3	0.0	0.018	14.8	0.0	1.8	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|332796565|ref|YP_004458065.1|	-	0.017	15.2	0.1	0.3	11.2	0.0	2.6	1	1	0	1	1	1	0	AAA	domain
TraG-D_C	PF12696.2	gi|332796565|ref|YP_004458065.1|	-	0.018	14.8	0.0	0.034	14.0	0.0	1.4	1	0	0	1	1	1	0	TraM	recognition	site	of	TraD	and	TraG
IstB_IS21	PF01695.12	gi|332796565|ref|YP_004458065.1|	-	0.09	12.1	0.0	3.4	7.0	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|332796565|ref|YP_004458065.1|	-	0.14	11.0	0.0	0.24	10.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|332796565|ref|YP_004458065.1|	-	0.18	11.6	0.0	0.43	10.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|332796565|ref|YP_004458065.1|	-	0.18	12.6	1.5	0.66	10.8	0.1	2.6	2	2	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|332796565|ref|YP_004458065.1|	-	2.2	8.5	9.4	0.18	12.0	0.8	2.7	2	1	0	2	2	2	0	AAA	domain
Semialdhyde_dh	PF01118.19	gi|332796567|ref|YP_004458067.1|	-	9.9e-34	116.2	0.0	5.1e-33	113.9	0.0	2.0	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|332796567|ref|YP_004458067.1|	-	4.2e-09	36.5	0.0	5.5e-09	36.1	0.0	1.1	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
CoA_binding_2	PF13380.1	gi|332796567|ref|YP_004458067.1|	-	0.023	14.8	0.0	0.067	13.3	0.0	1.8	2	0	0	2	2	2	0	CoA	binding	domain
Saccharop_dh	PF03435.13	gi|332796567|ref|YP_004458067.1|	-	0.13	11.2	0.0	0.18	10.7	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
AA_kinase	PF00696.23	gi|332796568|ref|YP_004458068.1|	-	7.4e-26	91.1	7.0	8.5e-26	90.9	4.8	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
AsnC_trans_reg	PF01037.16	gi|332796569|ref|YP_004458069.1|	-	9.2e-13	47.6	0.2	1.6e-12	46.9	0.1	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|332796569|ref|YP_004458069.1|	-	3.6e-12	45.4	3.2	6.9e-12	44.5	2.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|332796569|ref|YP_004458069.1|	-	1.4e-11	43.7	0.1	2.6e-11	42.8	0.1	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|332796569|ref|YP_004458069.1|	-	1.9e-05	24.1	0.9	1.9e-05	24.1	0.6	2.3	3	0	0	3	3	3	1	HTH	domain
HTH_Mga	PF08280.6	gi|332796569|ref|YP_004458069.1|	-	0.00014	21.5	0.7	0.00034	20.3	0.5	1.7	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF2250	PF10007.4	gi|332796569|ref|YP_004458069.1|	-	0.0002	21.2	0.9	0.00061	19.6	0.2	1.9	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|332796569|ref|YP_004458069.1|	-	0.00022	20.8	0.5	0.00029	20.4	0.4	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
TrmB	PF01978.14	gi|332796569|ref|YP_004458069.1|	-	0.0016	18.1	0.4	0.0038	16.8	0.2	1.7	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|332796569|ref|YP_004458069.1|	-	0.0023	17.6	0.3	0.0074	15.9	0.1	1.9	2	0	0	2	2	2	1	MarR	family
HTH_20	PF12840.2	gi|332796569|ref|YP_004458069.1|	-	0.0034	17.1	0.0	0.0056	16.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
NapD	PF03927.8	gi|332796569|ref|YP_004458069.1|	-	0.0035	17.1	0.9	0.0072	16.1	0.6	1.5	1	0	0	1	1	1	1	NapD	protein
HTH_9	PF08221.6	gi|332796569|ref|YP_004458069.1|	-	0.0043	16.8	0.1	0.01	15.6	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
FeoC	PF09012.5	gi|332796569|ref|YP_004458069.1|	-	0.005	16.5	0.0	0.0075	15.9	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
Rio2_N	PF09202.6	gi|332796569|ref|YP_004458069.1|	-	0.013	15.5	0.3	0.049	13.7	0.1	1.9	1	1	1	2	2	2	0	Rio2,	N-terminal
MarR_2	PF12802.2	gi|332796569|ref|YP_004458069.1|	-	0.015	14.9	0.0	0.022	14.4	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_DeoR	PF08220.7	gi|332796569|ref|YP_004458069.1|	-	0.021	14.3	0.3	0.044	13.3	0.2	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_36	PF13730.1	gi|332796569|ref|YP_004458069.1|	-	0.026	14.6	0.5	0.061	13.4	0.1	1.9	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332796569|ref|YP_004458069.1|	-	0.05	13.6	0.1	0.075	13.0	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Stk19	PF10494.4	gi|332796569|ref|YP_004458069.1|	-	0.079	12.3	0.2	0.078	12.3	0.2	1.2	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
HTH_Tnp_IS630	PF01710.11	gi|332796569|ref|YP_004458069.1|	-	0.083	12.5	1.0	0.13	11.9	0.6	1.5	1	1	0	1	1	1	0	Transposase
HTH_27	PF13463.1	gi|332796569|ref|YP_004458069.1|	-	0.095	13.0	0.1	0.2	12.0	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
PAX	PF00292.13	gi|332796569|ref|YP_004458069.1|	-	0.1	12.3	0.6	0.87	9.3	0.4	2.1	1	1	0	1	1	1	0	'Paired	box'	domain
Mga	PF05043.8	gi|332796569|ref|YP_004458069.1|	-	0.13	12.5	0.2	0.13	12.5	0.2	1.7	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
HTH_45	PF14947.1	gi|332796569|ref|YP_004458069.1|	-	0.36	10.6	3.3	0.16	11.7	0.5	1.7	2	0	0	2	2	1	0	Winged	helix-turn-helix
DNA_ligase_ZBD	PF03119.11	gi|332796570|ref|YP_004458070.1|	-	0.0053	16.4	0.8	0.17	11.6	0.2	2.3	2	0	0	2	2	2	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
TF_Zn_Ribbon	PF08271.7	gi|332796570|ref|YP_004458070.1|	-	0.016	14.5	0.4	0.023	14.0	0.2	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|332796570|ref|YP_004458070.1|	-	0.017	15.3	0.3	0.027	14.7	0.2	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.1	gi|332796570|ref|YP_004458070.1|	-	0.028	13.6	0.3	0.3	10.3	0.1	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|332796570|ref|YP_004458070.1|	-	0.033	13.9	0.6	0.065	12.9	0.5	1.5	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zinc_ribbon_4	PF13717.1	gi|332796570|ref|YP_004458070.1|	-	0.05	13.2	0.3	0.16	11.6	0.2	1.8	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332796570|ref|YP_004458070.1|	-	0.059	12.9	0.2	0.16	11.5	0.2	1.7	1	1	1	2	2	2	0	zinc-ribbon	domain
Acetone_carb_G	PF08882.6	gi|332796570|ref|YP_004458070.1|	-	0.14	12.1	0.1	0.35	10.8	0.1	1.6	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
A2L_zn_ribbon	PF08792.5	gi|332796570|ref|YP_004458070.1|	-	0.18	11.3	0.7	13	5.3	0.0	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332796570|ref|YP_004458070.1|	-	0.33	10.5	1.8	7.6	6.1	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
RimK	PF08443.6	gi|332796571|ref|YP_004458071.1|	-	1.9e-47	161.2	0.0	2.5e-47	160.8	0.0	1.2	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|332796571|ref|YP_004458071.1|	-	2e-12	47.2	0.0	2.8e-12	46.7	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|332796571|ref|YP_004458071.1|	-	8.4e-11	41.3	0.0	1.5e-10	40.5	0.0	1.4	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332796571|ref|YP_004458071.1|	-	1.6e-06	27.0	0.0	2.4e-06	26.5	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|332796571|ref|YP_004458071.1|	-	1.9e-06	27.8	0.0	3e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|332796571|ref|YP_004458071.1|	-	9.7e-06	25.0	0.0	1.4e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_5	PF13549.1	gi|332796571|ref|YP_004458071.1|	-	0.00014	21.1	0.0	0.00024	20.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Synapsin_C	PF02750.9	gi|332796571|ref|YP_004458071.1|	-	0.00058	19.0	0.0	0.003	16.6	0.0	1.9	2	0	0	2	2	2	1	Synapsin,	ATP	binding	domain
ATP-grasp	PF02222.17	gi|332796571|ref|YP_004458071.1|	-	0.001	18.4	0.0	0.0015	17.9	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|332796571|ref|YP_004458071.1|	-	0.0027	17.1	0.0	0.0047	16.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Aminotran_3	PF00202.16	gi|332796572|ref|YP_004458072.1|	-	1.9e-101	339.3	0.0	2.4e-101	338.9	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|332796572|ref|YP_004458072.1|	-	0.0025	16.8	0.0	0.0032	16.4	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|332796572|ref|YP_004458072.1|	-	0.088	11.5	0.0	0.14	10.8	0.0	1.4	1	0	0	1	1	1	0	Aminotransferase	class-V
Peptidase_M20	PF01546.23	gi|332796573|ref|YP_004458073.1|	-	3.6e-20	72.2	0.0	4.6e-20	71.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|332796573|ref|YP_004458073.1|	-	4.9e-07	29.4	0.0	8.5e-07	28.7	0.0	1.3	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|332796573|ref|YP_004458073.1|	-	0.003	17.3	0.0	0.0046	16.6	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
Prenyltransf	PF01255.14	gi|332796574|ref|YP_004458074.1|	-	1.7e-72	243.1	0.3	1.9e-72	243.0	0.2	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
MAAL_N	PF05034.8	gi|332796574|ref|YP_004458074.1|	-	0.056	13.2	0.0	0.081	12.6	0.0	1.2	1	0	0	1	1	1	0	Methylaspartate	ammonia-lyase	N-terminus
Ribosomal_S8e	PF01201.17	gi|332796575|ref|YP_004458075.1|	-	1.9e-35	121.8	0.9	2.1e-35	121.7	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
SRP19	PF01922.12	gi|332796576|ref|YP_004458076.1|	-	0.00018	22.0	0.1	0.00028	21.4	0.0	1.3	1	1	0	1	1	1	1	SRP19	protein
Lyase_1	PF00206.15	gi|332796577|ref|YP_004458077.1|	-	1.3e-95	320.1	0.0	1.6e-95	319.8	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|332796577|ref|YP_004458077.1|	-	1.1e-11	44.5	0.0	3.5e-11	42.9	0.0	1.9	1	0	0	1	1	1	1	Fumarase	C	C-terminus
Baculo_PEP_C	PF04513.7	gi|332796577|ref|YP_004458077.1|	-	0.017	14.9	0.1	0.049	13.4	0.0	1.8	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Lactamase_B	PF00753.22	gi|332796578|ref|YP_004458078.1|	-	1.2e-06	28.2	6.3	3.5e-05	23.5	4.4	2.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332796578|ref|YP_004458078.1|	-	0.0038	16.7	0.6	0.01	15.4	0.4	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF3834	PF12916.2	gi|332796579|ref|YP_004458079.1|	-	7.4e-55	185.0	2.1	8.8e-55	184.8	1.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
CBS	PF00571.23	gi|332796580|ref|YP_004458080.1|	-	8.7e-49	163.0	7.2	1e-13	50.8	0.1	4.1	4	0	0	4	4	4	4	CBS	domain
Peptidase_S29	PF02907.10	gi|332796580|ref|YP_004458080.1|	-	0.083	12.4	0.0	0.17	11.4	0.0	1.5	1	0	0	1	1	1	0	Hepatitis	C	virus	NS3	protease
NUDIX	PF00293.23	gi|332796581|ref|YP_004458081.1|	-	5.1e-18	65.0	0.0	6.1e-18	64.7	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
Esterase	PF00756.15	gi|332796582|ref|YP_004458082.1|	-	3.1e-17	62.8	0.0	1.1e-16	60.9	0.0	1.8	1	1	0	1	1	1	1	Putative	esterase
BAAT_C	PF08840.6	gi|332796582|ref|YP_004458082.1|	-	1.1e-05	25.2	0.0	2e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
DUF915	PF06028.6	gi|332796582|ref|YP_004458082.1|	-	0.00022	20.4	0.1	0.012	14.7	0.1	2.2	2	0	0	2	2	2	1	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
Abhydrolase_5	PF12695.2	gi|332796582|ref|YP_004458082.1|	-	0.003	17.3	0.0	0.0036	17.0	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
UPF0227	PF05728.7	gi|332796582|ref|YP_004458082.1|	-	0.069	12.8	1.2	0.084	12.5	0.0	1.7	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0227)
DUF429	PF04250.8	gi|332796583|ref|YP_004458083.1|	-	3.1e-10	39.6	0.5	1.9e-08	33.8	0.4	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
TIM	PF00121.13	gi|332796584|ref|YP_004458084.1|	-	1.8e-24	86.1	0.6	5.1e-22	78.1	0.4	2.0	1	1	0	1	1	1	1	Triosephosphate	isomerase
ThiG	PF05690.9	gi|332796584|ref|YP_004458084.1|	-	6.3e-06	25.4	0.7	1e-05	24.7	0.5	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.12	gi|332796584|ref|YP_004458084.1|	-	0.00019	20.7	1.6	0.00031	20.0	1.1	1.3	1	0	0	1	1	1	1	PcrB	family
IGPS	PF00218.16	gi|332796584|ref|YP_004458084.1|	-	0.00041	19.4	0.0	0.00059	18.9	0.0	1.2	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
DUF561	PF04481.7	gi|332796584|ref|YP_004458084.1|	-	0.00042	19.3	0.2	0.00089	18.2	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF561)
Trp_syntA	PF00290.15	gi|332796584|ref|YP_004458084.1|	-	0.00089	17.8	0.7	0.0014	17.1	0.5	1.3	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
NMO	PF03060.10	gi|332796584|ref|YP_004458084.1|	-	0.00095	18.4	0.4	0.0014	17.8	0.3	1.2	1	0	0	1	1	1	1	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|332796584|ref|YP_004458084.1|	-	0.0011	17.9	0.2	0.0018	17.1	0.1	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.16	gi|332796584|ref|YP_004458084.1|	-	0.0014	17.9	1.4	0.0022	17.2	0.2	1.8	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
DHO_dh	PF01180.16	gi|332796584|ref|YP_004458084.1|	-	0.027	13.4	0.1	0.034	13.1	0.1	1.2	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
Glu_synthase	PF01645.12	gi|332796584|ref|YP_004458084.1|	-	0.027	13.3	0.1	0.038	12.9	0.1	1.1	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
tRNA_SAD	PF07973.9	gi|332796585|ref|YP_004458085.1|	-	1.7e-05	24.6	0.1	4.5e-05	23.2	0.0	1.7	2	0	0	2	2	2	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
HTH_1	PF00126.22	gi|332796586|ref|YP_004458086.1|	-	2.5e-06	27.1	0.0	4.4e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
ATP-grasp	PF02222.17	gi|332796587|ref|YP_004458087.1|	-	2.4e-44	150.7	0.0	3.5e-44	150.1	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|332796587|ref|YP_004458087.1|	-	7.7e-08	32.2	0.0	1.8e-07	31.1	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|332796587|ref|YP_004458087.1|	-	4.3e-07	29.9	0.0	7.6e-07	29.1	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|332796587|ref|YP_004458087.1|	-	0.007	15.7	0.0	0.015	14.6	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332796587|ref|YP_004458087.1|	-	0.0094	14.7	0.0	2.5	6.7	0.0	2.2	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
2-Hacid_dh_C	PF02826.14	gi|332796587|ref|YP_004458087.1|	-	0.027	13.6	0.0	0.065	12.3	0.0	1.6	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GARS_A	PF01071.14	gi|332796587|ref|YP_004458087.1|	-	0.085	12.4	0.0	0.25	10.8	0.0	1.8	1	1	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
AIRC	PF00731.15	gi|332796588|ref|YP_004458088.1|	-	9e-71	236.0	0.2	1e-70	235.8	0.1	1.0	1	0	0	1	1	1	1	AIR	carboxylase
DUF4419	PF14388.1	gi|332796588|ref|YP_004458088.1|	-	0.11	11.6	0.0	0.19	10.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4419)
FAD_binding_4	PF01565.18	gi|332796589|ref|YP_004458089.1|	-	7.5e-11	41.6	0.0	3.5e-10	39.5	0.0	1.9	2	0	0	2	2	2	1	FAD	binding	domain
IU_nuc_hydro	PF01156.14	gi|332796590|ref|YP_004458090.1|	-	7.3e-82	275.0	0.0	8.6e-82	274.8	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
TrmB	PF01978.14	gi|332796591|ref|YP_004458091.1|	-	1.9e-07	30.6	0.2	2.4e-07	30.3	0.1	1.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|332796591|ref|YP_004458091.1|	-	8.2e-07	28.9	0.2	9.9e-07	28.7	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|332796591|ref|YP_004458091.1|	-	2.1e-06	27.9	0.0	2.6e-06	27.6	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|332796591|ref|YP_004458091.1|	-	2.3e-06	27.1	0.0	3.2e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|332796591|ref|YP_004458091.1|	-	3e-06	26.4	0.1	5.8e-06	25.6	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|332796591|ref|YP_004458091.1|	-	3.1e-05	23.5	0.0	4.4e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|332796591|ref|YP_004458091.1|	-	5.2e-05	22.7	0.0	7.3e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
S10_plectin	PF03501.10	gi|332796591|ref|YP_004458091.1|	-	0.00013	21.7	0.0	0.00017	21.4	0.0	1.1	1	0	0	1	1	1	1	Plectin/S10	domain
Rrf2	PF02082.15	gi|332796591|ref|YP_004458091.1|	-	0.00015	21.7	0.0	0.00021	21.3	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_36	PF13730.1	gi|332796591|ref|YP_004458091.1|	-	0.00039	20.4	0.1	0.00075	19.5	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
IF2_N	PF04760.10	gi|332796591|ref|YP_004458091.1|	-	0.00055	19.5	0.8	0.0037	16.8	0.5	2.1	1	1	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
B-block_TFIIIC	PF04182.7	gi|332796591|ref|YP_004458091.1|	-	0.00084	19.1	0.0	0.00096	18.9	0.0	1.3	1	1	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
MarR	PF01047.17	gi|332796591|ref|YP_004458091.1|	-	0.0019	17.8	0.0	0.0029	17.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_CodY	PF08222.6	gi|332796591|ref|YP_004458091.1|	-	0.0025	17.1	0.1	0.0031	16.8	0.0	1.2	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_11	PF08279.7	gi|332796591|ref|YP_004458091.1|	-	0.0028	17.2	0.1	0.004	16.7	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_17	PF12728.2	gi|332796591|ref|YP_004458091.1|	-	0.011	15.9	0.1	0.017	15.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
RepL	PF05732.6	gi|332796591|ref|YP_004458091.1|	-	0.015	14.5	0.0	0.016	14.4	0.0	1.1	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HxlR	PF01638.12	gi|332796591|ref|YP_004458091.1|	-	0.018	14.6	0.1	0.021	14.4	0.1	1.1	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
NUMOD1	PF07453.8	gi|332796591|ref|YP_004458091.1|	-	0.022	14.5	0.0	0.041	13.7	0.0	1.5	1	0	0	1	1	1	0	NUMOD1	domain
RPA_C	PF08784.6	gi|332796591|ref|YP_004458091.1|	-	0.025	14.9	0.0	0.036	14.4	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_6	PF01418.12	gi|332796591|ref|YP_004458091.1|	-	0.033	13.9	0.0	0.047	13.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
Sulfolobus_pRN	PF05584.6	gi|332796591|ref|YP_004458091.1|	-	0.036	14.0	0.1	0.078	12.9	0.0	1.7	1	1	1	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
HTH_Crp_2	PF13545.1	gi|332796591|ref|YP_004458091.1|	-	0.037	13.7	0.0	0.048	13.4	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|332796591|ref|YP_004458091.1|	-	0.051	13.0	0.0	0.092	12.2	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_20	PF12840.2	gi|332796591|ref|YP_004458091.1|	-	0.054	13.2	0.0	0.086	12.6	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|332796591|ref|YP_004458091.1|	-	0.07	13.0	0.1	0.1	12.5	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_9	PF08221.6	gi|332796591|ref|YP_004458091.1|	-	0.075	12.9	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
UvsW	PF11637.3	gi|332796591|ref|YP_004458091.1|	-	0.079	12.6	0.3	0.16	11.6	0.2	1.6	1	0	0	1	1	1	0	ATP-dependant	DNA	helicase	UvsW
GntR	PF00392.16	gi|332796591|ref|YP_004458091.1|	-	0.097	12.1	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_12	PF08461.5	gi|332796591|ref|YP_004458091.1|	-	0.11	12.2	0.1	0.17	11.6	0.1	1.5	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
TBPIP	PF07106.8	gi|332796591|ref|YP_004458091.1|	-	0.11	12.0	0.3	0.12	11.8	0.2	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
RNA_pol_Rpc34	PF05158.7	gi|332796591|ref|YP_004458091.1|	-	0.13	11.3	0.1	0.17	11.0	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
MFS_1	PF07690.11	gi|332796592|ref|YP_004458092.1|	-	0.00051	18.8	51.8	0.033	12.8	35.8	3.3	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
DUF384	PF04064.8	gi|332796593|ref|YP_004458093.1|	-	0.095	12.2	0.3	0.75	9.4	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF384)
Pkinase	PF00069.20	gi|332796594|ref|YP_004458094.1|	-	2.7e-28	98.8	0.0	4.5e-28	98.1	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|332796594|ref|YP_004458094.1|	-	4.2e-12	45.6	0.0	1e-11	44.3	0.0	1.6	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Apc3	PF12895.2	gi|332796594|ref|YP_004458094.1|	-	1.3e-08	34.8	3.6	8.8e-06	25.7	0.2	2.6	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|332796594|ref|YP_004458094.1|	-	1.4e-06	28.5	0.0	0.0031	17.8	0.0	2.9	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|332796594|ref|YP_004458094.1|	-	2.2e-05	24.0	6.1	0.00093	18.8	0.2	3.7	2	1	1	3	3	3	2	TPR	repeat
TPR_16	PF13432.1	gi|332796594|ref|YP_004458094.1|	-	3e-05	24.5	0.1	0.0011	19.6	0.3	2.9	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|332796594|ref|YP_004458094.1|	-	8.2e-05	22.4	1.2	0.014	15.2	0.1	3.5	2	2	1	3	3	3	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|332796594|ref|YP_004458094.1|	-	0.00059	19.5	12.0	0.69	9.9	0.1	5.2	6	0	0	6	6	5	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|332796594|ref|YP_004458094.1|	-	0.00064	20.0	1.3	38	5.0	0.0	5.4	6	0	0	6	6	5	0	Tetratricopeptide	repeat
PPR	PF01535.15	gi|332796594|ref|YP_004458094.1|	-	0.0017	18.1	7.2	0.5	10.4	0.4	4.4	4	0	0	4	4	4	2	PPR	repeat
TPR_7	PF13176.1	gi|332796594|ref|YP_004458094.1|	-	0.0051	16.5	1.3	5.5	7.0	0.0	4.0	4	1	0	4	4	3	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|332796594|ref|YP_004458094.1|	-	0.0075	16.8	0.0	3.2	8.6	0.0	3.7	2	2	2	4	4	3	1	Tetratricopeptide	repeat
BTAD	PF03704.12	gi|332796594|ref|YP_004458094.1|	-	0.015	15.5	0.1	1.1	9.5	0.0	3.1	3	0	0	3	3	3	0	Bacterial	transcriptional	activator	domain
TPR_1	PF00515.23	gi|332796594|ref|YP_004458094.1|	-	0.023	14.2	14.7	0.15	11.7	0.1	5.0	6	0	0	6	6	5	0	Tetratricopeptide	repeat
APH	PF01636.18	gi|332796594|ref|YP_004458094.1|	-	0.026	14.2	0.0	5.8	6.5	0.0	2.3	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
DUF1955	PF09205.5	gi|332796594|ref|YP_004458094.1|	-	0.34	10.4	7.7	0.4	10.2	0.8	3.4	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF1955)
TPR_8	PF13181.1	gi|332796594|ref|YP_004458094.1|	-	4.1	7.4	14.1	6.5	6.7	0.0	4.6	3	1	2	5	5	5	0	Tetratricopeptide	repeat
Amidohydro_2	PF04909.9	gi|332796595|ref|YP_004458095.1|	-	3.6e-12	46.4	0.0	8e-12	45.2	0.0	1.4	1	1	1	2	2	2	1	Amidohydrolase
Ribonuc_L-PSP	PF01042.16	gi|332796596|ref|YP_004458096.1|	-	1.9e-41	140.6	0.0	2.1e-41	140.4	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
CBS	PF00571.23	gi|332796598|ref|YP_004458098.1|	-	2.9e-43	145.3	7.0	1.6e-09	37.4	0.0	4.7	4	1	0	4	4	4	4	CBS	domain
EAP30	PF04157.11	gi|332796598|ref|YP_004458098.1|	-	0.074	12.2	0.1	2.6	7.1	0.0	2.1	1	1	0	2	2	2	0	EAP30/Vps36	family
DSBA	PF01323.15	gi|332796599|ref|YP_004458099.1|	-	6.1e-24	84.6	1.4	1.5e-14	54.0	0.1	2.1	2	0	0	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.1	gi|332796599|ref|YP_004458099.1|	-	8.9e-22	77.4	0.2	2e-21	76.3	0.2	1.5	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|332796599|ref|YP_004458099.1|	-	5.9e-10	39.3	2.3	3.8e-08	33.5	0.1	2.2	1	1	0	2	2	2	2	Thioredoxin
Thioredoxin_3	PF13192.1	gi|332796599|ref|YP_004458099.1|	-	3.3e-06	26.8	0.4	0.00034	20.3	0.1	2.5	2	0	0	2	2	2	1	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|332796599|ref|YP_004458099.1|	-	0.0021	18.2	1.1	0.094	12.9	0.8	2.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF1525	PF07511.6	gi|332796599|ref|YP_004458099.1|	-	0.043	13.7	0.0	0.072	13.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1525)
DUF3782	PF12644.2	gi|332796599|ref|YP_004458099.1|	-	2.4	8.0	5.6	3.5	7.4	2.7	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3782)
CBS	PF00571.23	gi|332796600|ref|YP_004458100.1|	-	4.1e-28	96.9	1.4	6.3e-15	54.6	0.0	2.1	2	0	0	2	2	2	2	CBS	domain
DUF1347	PF07079.6	gi|332796601|ref|YP_004458101.1|	-	0.032	12.4	0.1	0.043	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1347)
LBP_BPI_CETP_C	PF02886.12	gi|332796601|ref|YP_004458101.1|	-	0.058	12.6	0.0	0.098	11.8	0.0	1.3	1	0	0	1	1	1	0	LBP	/	BPI	/	CETP	family,	C-terminal	domain
AMP-binding	PF00501.23	gi|332796602|ref|YP_004458102.1|	-	3.5e-91	305.6	0.0	4.7e-91	305.2	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|332796602|ref|YP_004458102.1|	-	1.3e-14	54.9	0.0	2.8e-14	53.8	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF2122	PF09895.4	gi|332796602|ref|YP_004458102.1|	-	0.0048	17.0	0.1	0.21	11.8	0.2	2.6	2	0	0	2	2	2	1	RecB-family	nuclease	(DUF2122)
Baseplate_J	PF04865.9	gi|332796602|ref|YP_004458102.1|	-	0.11	11.8	0.0	0.22	10.8	0.0	1.4	1	0	0	1	1	1	0	Baseplate	J-like	protein
CoA_trans	PF01144.18	gi|332796603|ref|YP_004458103.1|	-	1.8e-20	73.1	0.0	2e-20	72.8	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.18	gi|332796604|ref|YP_004458104.1|	-	9.9e-28	96.7	0.0	1.2e-27	96.5	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
Phage_Capsid_P3	PF09018.6	gi|332796604|ref|YP_004458104.1|	-	0.033	12.7	0.0	0.038	12.5	0.0	1.2	1	0	0	1	1	1	0	P3	major	capsid	protein
FliD_C	PF07195.7	gi|332796605|ref|YP_004458105.1|	-	0.079	12.2	0.0	0.096	11.9	0.0	1.1	1	0	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
tRNA_m1G_MT	PF01746.16	gi|332796606|ref|YP_004458106.1|	-	1.6e-13	50.6	0.1	8e-12	45.1	0.1	2.3	1	1	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
B2	PF11473.3	gi|332796606|ref|YP_004458106.1|	-	0.048	13.2	0.0	0.092	12.3	0.0	1.4	1	0	0	1	1	1	0	RNA	binding	protein	B2
VWA_2	PF13519.1	gi|332796607|ref|YP_004458107.1|	-	3.9e-12	46.6	0.0	1.7e-10	41.2	0.0	2.4	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|332796607|ref|YP_004458107.1|	-	2.8e-11	43.4	0.2	7.8e-11	42.0	0.1	1.7	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|332796607|ref|YP_004458107.1|	-	1.9e-06	27.6	0.0	1.8e-05	24.4	0.0	2.3	2	1	0	2	2	2	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|332796607|ref|YP_004458107.1|	-	0.0074	16.1	0.1	0.041	13.6	0.0	2.3	2	1	0	2	2	2	1	vWA	found	in	TerF	C	terminus
FHA	PF00498.21	gi|332796608|ref|YP_004458108.1|	-	1.2e-18	66.9	0.0	2.3e-18	66.0	0.0	1.5	1	0	0	1	1	1	1	FHA	domain
zf-ribbon_3	PF13248.1	gi|332796608|ref|YP_004458108.1|	-	3.7e-08	32.3	0.6	6.5e-08	31.5	0.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332796608|ref|YP_004458108.1|	-	9.9e-08	31.2	2.3	1.7e-07	30.4	1.6	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|332796608|ref|YP_004458108.1|	-	1.4e-06	27.3	0.9	2e-06	26.7	0.6	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DZR	PF12773.2	gi|332796608|ref|YP_004458108.1|	-	2.9e-05	23.8	2.0	4.6e-05	23.1	1.4	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|332796608|ref|YP_004458108.1|	-	0.015	14.9	0.7	0.024	14.3	0.5	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-Sec23_Sec24	PF04810.10	gi|332796608|ref|YP_004458108.1|	-	0.087	12.4	1.3	0.17	11.4	0.1	1.9	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
zf-tcix	PF14952.1	gi|332796608|ref|YP_004458108.1|	-	0.18	11.1	0.6	0.31	10.4	0.4	1.4	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
TFIIA	PF03153.8	gi|332796608|ref|YP_004458108.1|	-	0.22	11.3	11.8	0.28	11.0	8.2	1.1	1	0	0	1	1	1	0	Transcription	factor	IIA,	alpha/beta	subunit
ATP-synt_B	PF00430.13	gi|332796608|ref|YP_004458108.1|	-	1.1	9.1	5.6	1.5	8.6	3.9	1.2	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
Lin-8	PF03353.10	gi|332796608|ref|YP_004458108.1|	-	2.9	7.0	7.8	3.9	6.6	5.4	1.1	1	0	0	1	1	1	0	Ras-mediated	vulval-induction	antagonist
PAT1	PF09770.4	gi|332796608|ref|YP_004458108.1|	-	7	4.7	22.6	8.4	4.4	15.6	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
Metallophos	PF00149.23	gi|332796609|ref|YP_004458109.1|	-	4.7e-29	101.2	0.3	6.7e-29	100.7	0.2	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|332796609|ref|YP_004458109.1|	-	3.4e-08	33.4	0.0	3.8e-08	33.3	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|332796609|ref|YP_004458109.1|	-	0.092	12.2	0.0	0.39	10.2	0.0	1.9	2	0	0	2	2	2	0	Beta-lactamase	superfamily	domain
VWA_2	PF13519.1	gi|332796610|ref|YP_004458110.1|	-	1.9e-18	67.1	0.0	3.7e-18	66.2	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|332796610|ref|YP_004458110.1|	-	4e-16	59.2	0.2	8.1e-16	58.2	0.0	1.5	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|332796610|ref|YP_004458110.1|	-	1.2e-10	41.3	0.0	2.9e-10	40.0	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF2201	PF09967.4	gi|332796610|ref|YP_004458110.1|	-	0.00044	20.2	0.0	0.00088	19.2	0.0	1.6	1	0	0	1	1	1	1	VWA-like	domain	(DUF2201)
VWA_CoxE	PF05762.9	gi|332796610|ref|YP_004458110.1|	-	0.0011	18.1	0.0	0.0025	17.0	0.0	1.5	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
vWA-TerF-like	PF10138.4	gi|332796610|ref|YP_004458110.1|	-	0.003	17.3	0.1	0.016	15.0	0.1	2.1	1	1	0	1	1	1	1	vWA	found	in	TerF	C	terminus
ACT_4	PF13291.1	gi|332796611|ref|YP_004458111.1|	-	0.11	12.8	0.1	0.22	11.8	0.1	1.5	1	0	0	1	1	1	0	ACT	domain
Antitoxin-MazE	PF04014.13	gi|332796612|ref|YP_004458112.1|	-	5.9e-11	41.8	0.1	6.7e-11	41.6	0.1	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|332796612|ref|YP_004458112.1|	-	0.00025	20.4	0.6	0.00084	18.7	0.1	1.8	1	1	1	2	2	2	1	Translation	initiation	factor	1A	/	IF-1
UPF0270	PF06794.7	gi|332796612|ref|YP_004458112.1|	-	0.058	13.1	0.0	0.064	13.0	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0270)
CDC48_N	PF02359.13	gi|332796612|ref|YP_004458112.1|	-	0.12	12.3	0.1	0.13	12.1	0.1	1.2	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
DUF402	PF04167.8	gi|332796613|ref|YP_004458113.1|	-	3.9e-17	61.8	2.4	8.7e-17	60.7	1.7	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF402)
RNase_E_G	PF10150.4	gi|332796613|ref|YP_004458113.1|	-	0.062	12.5	0.7	0.33	10.1	0.0	2.4	3	0	0	3	3	3	0	Ribonuclease	E/G	family
Aconitase	PF00330.15	gi|332796614|ref|YP_004458114.1|	-	5.3e-127	424.1	0.0	2.6e-126	421.8	0.0	1.9	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|332796614|ref|YP_004458114.1|	-	2.3e-34	118.3	0.0	5.2e-34	117.1	0.0	1.6	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
NTP_transf_2	PF01909.18	gi|332796615|ref|YP_004458115.1|	-	0.099	12.9	0.9	0.15	12.4	0.6	1.5	1	1	0	1	1	1	0	Nucleotidyltransferase	domain
DUF2258	PF10015.4	gi|332796616|ref|YP_004458116.1|	-	1e-28	98.9	2.5	1e-28	98.9	1.7	1.7	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
HALZ	PF02183.13	gi|332796616|ref|YP_004458116.1|	-	0.0016	18.0	1.1	0.003	17.2	0.8	1.5	1	0	0	1	1	1	1	Homeobox	associated	leucine	zipper
DivIVA	PF05103.8	gi|332796616|ref|YP_004458116.1|	-	0.0049	16.9	2.2	0.072	13.1	0.7	2.4	2	1	0	2	2	2	1	DivIVA	protein
ATG19_autophagy	PF12744.2	gi|332796616|ref|YP_004458116.1|	-	0.015	14.5	0.9	0.025	13.8	0.6	1.4	1	0	0	1	1	1	0	Autophagy	protein	Atg19,	Atg8-binding
Prp19	PF08606.6	gi|332796616|ref|YP_004458116.1|	-	0.021	14.5	0.1	0.04	13.6	0.1	1.4	1	0	0	1	1	1	0	Prp19/Pso4-like
Kinesin-related	PF06548.6	gi|332796616|ref|YP_004458116.1|	-	0.024	13.2	3.1	0.026	13.0	2.2	1.1	1	0	0	1	1	1	0	Kinesin-related
K-box	PF01486.12	gi|332796616|ref|YP_004458116.1|	-	0.026	14.3	0.3	0.056	13.2	0.2	1.6	1	0	0	1	1	1	0	K-box	region
Geminin	PF07412.7	gi|332796616|ref|YP_004458116.1|	-	0.028	14.1	1.5	0.036	13.7	1.0	1.3	1	0	0	1	1	1	0	Geminin
DUF972	PF06156.8	gi|332796616|ref|YP_004458116.1|	-	0.061	13.6	1.6	0.11	12.8	0.8	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
DUF904	PF06005.7	gi|332796616|ref|YP_004458116.1|	-	0.07	13.4	3.0	0.15	12.3	2.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF904)
Z1	PF10593.4	gi|332796616|ref|YP_004458116.1|	-	0.087	12.0	1.0	0.15	11.2	0.3	1.6	1	1	0	1	1	1	0	Z1	domain
TPR_MLP1_2	PF07926.7	gi|332796616|ref|YP_004458116.1|	-	0.14	11.9	5.0	0.62	9.8	3.5	2.0	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
DUF2779	PF11074.3	gi|332796616|ref|YP_004458116.1|	-	0.24	11.4	4.8	0.48	10.4	3.4	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function(DUF2779)
CesA	PF11439.3	gi|332796616|ref|YP_004458116.1|	-	0.25	11.2	4.6	0.5	10.3	3.2	1.5	1	0	0	1	1	1	0	Type	III	secretion	system	filament	chaperone	CesA
DUF4145	PF13643.1	gi|332796616|ref|YP_004458116.1|	-	0.49	10.2	2.7	6	6.8	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4145)
DUF883	PF05957.8	gi|332796617|ref|YP_004458117.1|	-	0.0026	18.0	0.4	0.61	10.5	0.0	2.1	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF883)
DUF1624	PF07786.7	gi|332796617|ref|YP_004458117.1|	-	0.0084	15.4	2.8	0.0097	15.2	1.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1624)
DUF2798	PF11391.3	gi|332796617|ref|YP_004458117.1|	-	0.064	13.0	0.3	0.064	13.0	0.2	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2798)
ATPase_gene1	PF09527.5	gi|332796617|ref|YP_004458117.1|	-	0.11	12.3	12.3	0.42	10.4	5.1	2.2	2	0	0	2	2	2	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
O-antigen_lig	PF13425.1	gi|332796617|ref|YP_004458117.1|	-	0.25	11.3	7.7	0.33	10.9	5.1	1.4	1	1	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
Oxidored_q2	PF00420.19	gi|332796617|ref|YP_004458117.1|	-	0.39	10.3	8.3	0.59	9.7	5.8	1.3	1	1	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2393	PF09624.5	gi|332796617|ref|YP_004458117.1|	-	0.9	9.0	5.4	1.1	8.8	3.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2393)
DUF1980	PF09323.5	gi|332796617|ref|YP_004458117.1|	-	1	9.0	4.0	1.4	8.6	2.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1980)
DUF1275	PF06912.6	gi|332796617|ref|YP_004458117.1|	-	2.2	7.4	10.2	1.1	8.4	5.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1275)
DUF3487	PF11990.3	gi|332796617|ref|YP_004458117.1|	-	2.9	7.3	11.6	0.57	9.5	5.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3487)
DUF3329	PF11808.3	gi|332796617|ref|YP_004458117.1|	-	6.4	6.9	7.9	26	5.0	0.0	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3329)
FUN14	PF04930.10	gi|332796617|ref|YP_004458117.1|	-	6.6	7.0	12.3	45	4.4	8.5	2.0	1	1	0	1	1	1	0	FUN14	family
MtrC	PF04211.8	gi|332796617|ref|YP_004458117.1|	-	6.6	5.6	13.3	3.7	6.5	6.2	1.9	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
TrmB	PF01978.14	gi|332796618|ref|YP_004458118.1|	-	6.1e-11	41.8	1.1	9.6e-11	41.2	0.5	1.6	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|332796618|ref|YP_004458118.1|	-	3.6e-09	36.0	3.9	4.2e-09	35.8	2.7	1.0	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR_2	PF12802.2	gi|332796618|ref|YP_004458118.1|	-	6.8e-09	35.2	0.0	9.8e-09	34.7	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|332796618|ref|YP_004458118.1|	-	8.5e-09	34.9	0.2	1.3e-08	34.4	0.2	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|332796618|ref|YP_004458118.1|	-	4.5e-07	29.4	0.2	8.8e-07	28.4	0.2	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_27	PF13463.1	gi|332796618|ref|YP_004458118.1|	-	4.8e-07	29.9	0.0	7.5e-07	29.3	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|332796618|ref|YP_004458118.1|	-	1.7e-05	24.6	0.4	5.9e-05	22.9	0.2	1.9	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_24	PF13412.1	gi|332796618|ref|YP_004458118.1|	-	2.5e-05	23.5	0.3	4.6e-05	22.7	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
RuvB_C	PF05491.8	gi|332796618|ref|YP_004458118.1|	-	8.6e-05	22.0	0.1	0.00016	21.1	0.1	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
HTH_DeoR	PF08220.7	gi|332796618|ref|YP_004458118.1|	-	0.0001	21.7	0.1	0.00021	20.7	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_34	PF13601.1	gi|332796618|ref|YP_004458118.1|	-	0.00019	21.3	0.8	0.00061	19.7	0.3	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
GntR	PF00392.16	gi|332796618|ref|YP_004458118.1|	-	0.00073	18.9	0.0	0.0072	15.7	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_36	PF13730.1	gi|332796618|ref|YP_004458118.1|	-	0.0011	19.1	1.3	0.0035	17.4	0.4	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|332796618|ref|YP_004458118.1|	-	0.0046	16.7	0.0	0.022	14.5	0.0	1.8	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
Cullin_Nedd8	PF10557.4	gi|332796618|ref|YP_004458118.1|	-	0.0047	16.7	0.7	0.045	13.5	0.2	2.3	2	0	0	2	2	2	1	Cullin	protein	neddylation	domain
DUF387	PF04079.11	gi|332796618|ref|YP_004458118.1|	-	0.0056	16.0	0.1	0.007	15.7	0.0	1.2	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
EAP30	PF04157.11	gi|332796618|ref|YP_004458118.1|	-	0.0063	15.6	0.1	0.02	14.0	0.0	1.7	2	0	0	2	2	2	1	EAP30/Vps36	family
DUF4393	PF14337.1	gi|332796618|ref|YP_004458118.1|	-	0.014	14.8	0.1	0.015	14.7	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
HTH_19	PF12844.2	gi|332796618|ref|YP_004458118.1|	-	0.015	15.3	0.2	0.031	14.3	0.1	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|332796618|ref|YP_004458118.1|	-	0.03	14.4	0.6	0.055	13.5	0.4	1.6	1	1	0	1	1	1	0	Penicillinase	repressor
HTH_5	PF01022.15	gi|332796618|ref|YP_004458118.1|	-	0.036	13.7	0.1	0.21	11.2	0.1	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HsdM_N	PF12161.3	gi|332796618|ref|YP_004458118.1|	-	0.052	13.9	0.2	0.11	12.9	0.1	1.5	1	1	1	2	2	2	0	HsdM	N-terminal	domain
DUF4423	PF14394.1	gi|332796618|ref|YP_004458118.1|	-	0.059	12.8	1.0	0.084	12.4	0.1	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
RPA_C	PF08784.6	gi|332796618|ref|YP_004458118.1|	-	0.061	13.7	0.1	0.23	11.8	0.1	1.9	1	1	0	1	1	1	0	Replication	protein	A	C	terminal
FeoC	PF09012.5	gi|332796618|ref|YP_004458118.1|	-	0.076	12.7	0.2	0.13	12.0	0.1	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Rrf2	PF02082.15	gi|332796618|ref|YP_004458118.1|	-	0.094	12.8	0.1	0.16	12.0	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_10	PF04967.7	gi|332796618|ref|YP_004458118.1|	-	0.13	11.9	0.3	0.64	9.6	0.1	2.2	3	0	0	3	3	3	0	HTH	DNA	binding	domain
HTH_20	PF12840.2	gi|332796618|ref|YP_004458118.1|	-	0.14	12.0	0.0	0.27	11.0	0.0	1.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|332796618|ref|YP_004458118.1|	-	0.14	11.8	1.0	0.19	11.5	0.2	1.6	2	0	0	2	2	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Gp-FAR-1	PF05823.7	gi|332796618|ref|YP_004458118.1|	-	0.19	11.6	2.3	9.6	6.1	0.2	2.1	2	0	0	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
DUF4342	PF14242.1	gi|332796618|ref|YP_004458118.1|	-	0.98	9.2	4.9	0.85	9.4	0.9	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4342)
FAD_binding_6	PF00970.19	gi|332796620|ref|YP_004458120.1|	-	0.006	16.6	0.0	0.02	15.0	0.0	1.8	1	1	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_1	PF00175.16	gi|332796620|ref|YP_004458120.1|	-	0.11	13.0	0.0	1.3	9.6	0.0	2.1	1	1	1	2	2	2	0	Oxidoreductase	NAD-binding	domain
MS_channel	PF00924.13	gi|332796623|ref|YP_004458123.1|	-	1.6e-27	96.1	1.6	1.6e-27	96.1	1.1	1.6	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
TMCO5	PF14992.1	gi|332796623|ref|YP_004458123.1|	-	0.57	9.2	5.7	0.6	9.2	0.1	2.1	2	0	0	2	2	2	0	TMCO5	family
Glyco_hydro_15	PF00723.16	gi|332796624|ref|YP_004458124.1|	-	7.3e-22	77.5	0.0	8.4e-15	54.2	0.0	3.1	2	1	1	3	3	3	3	Glycosyl	hydrolases	family	15
MBOAT_2	PF13813.1	gi|332796624|ref|YP_004458124.1|	-	0.0084	16.1	0.3	0.029	14.4	0.2	1.9	1	0	0	1	1	1	1	Membrane	bound	O-acyl	transferase	family
TPR_21	PF09976.4	gi|332796624|ref|YP_004458124.1|	-	0.04	13.8	0.0	0.081	12.8	0.0	1.4	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Glycos_transf_2	PF00535.21	gi|332796625|ref|YP_004458125.1|	-	1.9e-10	40.6	0.1	3.4e-09	36.6	0.1	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
WSS_VP	PF12175.3	gi|332796626|ref|YP_004458126.1|	-	0.081	12.0	0.0	0.093	11.7	0.0	1.2	1	0	0	1	1	1	0	White	spot	syndrome	virus	structural	envelope	protein	VP
TFIIE_alpha	PF02002.12	gi|332796626|ref|YP_004458126.1|	-	0.084	12.3	1.0	0.13	11.7	0.6	1.4	1	1	0	1	1	1	0	TFIIE	alpha	subunit
PhoU_div	PF01865.11	gi|332796627|ref|YP_004458127.1|	-	0.039	13.1	0.5	0.05	12.7	0.1	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF47
XdhC_C	PF13478.1	gi|332796628|ref|YP_004458128.1|	-	2.9e-19	69.7	0.0	3.9e-19	69.2	0.0	1.1	1	0	0	1	1	1	1	XdhC	Rossmann	domain
UPF0146	PF03686.8	gi|332796628|ref|YP_004458128.1|	-	0.031	14.1	0.7	0.047	13.5	0.5	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0146)
PmbA_TldD	PF01523.11	gi|332796629|ref|YP_004458129.1|	-	3.9e-17	62.4	0.0	6.8e-17	61.6	0.0	1.4	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF1057	PF06342.7	gi|332796629|ref|YP_004458129.1|	-	0.0092	14.8	0.5	0.071	11.9	0.0	2.3	3	0	0	3	3	3	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
LOH1CR12	PF10158.4	gi|332796629|ref|YP_004458129.1|	-	0.088	12.5	0.3	0.34	10.6	0.2	1.9	1	1	1	2	2	2	0	Tumour	suppressor	protein
DUF2154	PF09922.4	gi|332796630|ref|YP_004458130.1|	-	0.01	15.4	0.0	0.018	14.7	0.0	1.3	1	0	0	1	1	1	0	Cell	wall-active	antibiotics	response	protein	(DUF2154)
TMEM238	PF15125.1	gi|332796630|ref|YP_004458130.1|	-	0.04	13.8	1.3	0.04	13.8	0.9	2.6	2	1	1	3	3	3	0	TMEM238	protein	family
ABC2_membrane_4	PF12730.2	gi|332796630|ref|YP_004458130.1|	-	0.44	9.6	10.5	0.59	9.2	7.3	1.3	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF4271	PF14093.1	gi|332796631|ref|YP_004458131.1|	-	0.0023	17.6	0.3	0.0023	17.6	0.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4271)
DUF2721	PF11026.3	gi|332796631|ref|YP_004458131.1|	-	0.0082	15.7	0.0	0.0092	15.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
DUF2079	PF09852.4	gi|332796631|ref|YP_004458131.1|	-	0.0097	14.6	0.9	0.01	14.5	0.6	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
TrbC	PF04956.8	gi|332796631|ref|YP_004458131.1|	-	0.0099	15.8	3.9	0.026	14.5	2.6	1.7	1	1	1	2	2	2	1	TrbC/VIRB2	family
DUF2207	PF09972.4	gi|332796631|ref|YP_004458131.1|	-	0.012	14.2	0.4	0.013	14.0	0.3	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Acyl_transf_3	PF01757.17	gi|332796631|ref|YP_004458131.1|	-	0.014	14.3	4.9	0.016	14.0	3.4	1.0	1	0	0	1	1	1	0	Acyltransferase	family
YjgP_YjgQ	PF03739.9	gi|332796631|ref|YP_004458131.1|	-	0.017	13.9	0.3	0.018	13.7	0.2	1.0	1	0	0	1	1	1	0	Predicted	permease	YjgP/YjgQ	family
DUF4519	PF15012.1	gi|332796631|ref|YP_004458131.1|	-	0.029	14.2	0.6	2.6	8.0	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4519)
NMN_transporter	PF04973.7	gi|332796631|ref|YP_004458131.1|	-	0.044	13.2	0.0	0.059	12.8	0.0	1.2	1	0	0	1	1	1	0	Nicotinamide	mononucleotide	transporter
FA_desaturase	PF00487.19	gi|332796631|ref|YP_004458131.1|	-	0.15	11.4	1.6	0.16	11.3	1.1	1.1	1	0	0	1	1	1	0	Fatty	acid	desaturase
2TM	PF13239.1	gi|332796631|ref|YP_004458131.1|	-	0.21	11.6	2.4	0.28	11.2	1.7	1.2	1	0	0	1	1	1	0	2TM	domain
DUF2619	PF10942.3	gi|332796631|ref|YP_004458131.1|	-	0.25	11.3	1.6	0.44	10.5	0.5	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2619)
UPF0118	PF01594.11	gi|332796631|ref|YP_004458131.1|	-	0.66	8.8	8.8	0.82	8.5	6.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF20
MORN_2	PF07661.8	gi|332796632|ref|YP_004458132.1|	-	0.0045	16.8	0.7	0.088	12.8	0.0	2.8	2	0	0	2	2	2	1	MORN	repeat	variant
ATP_bind_3	PF01171.15	gi|332796633|ref|YP_004458133.1|	-	2.3e-15	56.5	0.0	6.9e-15	55.0	0.0	1.8	1	1	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|332796633|ref|YP_004458133.1|	-	0.003	16.1	0.1	0.0072	14.9	0.1	1.6	1	1	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|332796633|ref|YP_004458133.1|	-	0.0039	16.1	0.1	0.0055	15.6	0.1	1.2	1	0	0	1	1	1	1	NAD	synthase
ThiI	PF02568.9	gi|332796633|ref|YP_004458133.1|	-	0.0058	16.1	0.1	0.011	15.1	0.1	1.4	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
RecR	PF02132.10	gi|332796633|ref|YP_004458133.1|	-	0.0082	15.5	0.6	0.0082	15.5	0.4	2.8	3	0	0	3	3	3	1	RecR	protein
QueC	PF06508.8	gi|332796633|ref|YP_004458133.1|	-	0.01	15.1	0.3	0.024	13.9	0.2	1.8	1	1	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
PAPS_reduct	PF01507.14	gi|332796633|ref|YP_004458133.1|	-	0.014	15.1	0.0	0.038	13.8	0.0	1.8	1	1	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
Asn_synthase	PF00733.16	gi|332796633|ref|YP_004458133.1|	-	0.038	13.4	0.0	0.054	12.9	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
DZR	PF12773.2	gi|332796633|ref|YP_004458133.1|	-	0.085	12.6	5.9	0.85	9.4	0.4	3.2	3	0	0	3	3	3	0	Double	zinc	ribbon
DEAD	PF00270.24	gi|332796635|ref|YP_004458135.1|	-	8.5e-44	149.0	0.0	1.2e-42	145.3	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332796635|ref|YP_004458135.1|	-	6.6e-25	86.7	0.1	1.2e-24	85.9	0.1	1.5	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332796635|ref|YP_004458135.1|	-	3.5e-07	30.2	0.0	3.7e-06	26.9	0.0	2.2	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SecA_DEAD	PF07517.9	gi|332796635|ref|YP_004458135.1|	-	2.7e-06	26.9	0.4	1.1e-05	24.8	0.3	1.9	1	1	0	1	1	1	1	SecA	DEAD-like	domain
AAA_19	PF13245.1	gi|332796635|ref|YP_004458135.1|	-	0.0076	15.9	0.0	0.028	14.1	0.0	1.9	2	0	0	2	2	2	1	Part	of	AAA	domain
Flavi_DEAD	PF07652.9	gi|332796635|ref|YP_004458135.1|	-	0.013	15.2	0.0	0.35	10.6	0.0	2.4	2	0	0	2	2	2	0	Flavivirus	DEAD	domain
T4SS-DNA_transf	PF02534.9	gi|332796635|ref|YP_004458135.1|	-	0.019	13.5	0.0	0.032	12.8	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretory	system	Conjugative	DNA	transfer
Helicase_C_2	PF13307.1	gi|332796635|ref|YP_004458135.1|	-	0.034	14.0	0.0	1.6	8.6	0.0	2.4	2	0	0	2	2	2	0	Helicase	C-terminal	domain
Phage_rep_org_N	PF09681.5	gi|332796636|ref|YP_004458136.1|	-	0.00015	21.3	0.3	0.00025	20.5	0.2	1.4	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_34	PF13601.1	gi|332796636|ref|YP_004458136.1|	-	0.00034	20.5	0.4	0.00053	19.9	0.3	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|332796636|ref|YP_004458136.1|	-	0.00052	19.6	0.1	0.00098	18.7	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|332796636|ref|YP_004458136.1|	-	0.0014	18.9	0.1	0.0023	18.2	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF1495	PF07381.6	gi|332796636|ref|YP_004458136.1|	-	0.0027	17.3	0.1	0.023	14.3	0.0	2.0	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
PadR	PF03551.9	gi|332796636|ref|YP_004458136.1|	-	0.017	14.8	0.1	0.042	13.6	0.1	1.8	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|332796636|ref|YP_004458136.1|	-	0.018	14.7	0.0	0.035	13.7	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Rotamase_3	PF13616.1	gi|332796636|ref|YP_004458136.1|	-	0.023	14.9	0.2	0.034	14.4	0.2	1.3	1	0	0	1	1	1	0	PPIC-type	PPIASE	domain
MarR_2	PF12802.2	gi|332796636|ref|YP_004458136.1|	-	0.04	13.5	0.0	0.073	12.7	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_20	PF12840.2	gi|332796636|ref|YP_004458136.1|	-	0.045	13.5	0.0	0.072	12.9	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_42	PF06224.7	gi|332796636|ref|YP_004458136.1|	-	0.049	12.9	0.0	0.057	12.7	0.0	1.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Replic_Relax	PF13814.1	gi|332796636|ref|YP_004458136.1|	-	0.083	12.7	0.0	0.1	12.4	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
HTH_12	PF08461.5	gi|332796636|ref|YP_004458136.1|	-	0.099	12.3	1.9	0.29	10.8	1.3	2.0	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_24	PF13412.1	gi|332796636|ref|YP_004458136.1|	-	0.18	11.2	1.1	0.36	10.2	0.1	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
SSF	PF00474.12	gi|332796637|ref|YP_004458137.1|	-	9.1e-17	60.7	27.1	1.4e-16	60.1	18.8	1.2	1	0	0	1	1	1	1	Sodium:solute	symporter	family
DUF3311	PF11755.3	gi|332796638|ref|YP_004458138.1|	-	9.4e-10	37.8	2.9	1e-09	37.7	2.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
Spo7	PF03907.8	gi|332796638|ref|YP_004458138.1|	-	0.67	9.5	3.2	0.7	9.4	2.2	1.0	1	0	0	1	1	1	0	Spo7-like	protein
2TM	PF13239.1	gi|332796638|ref|YP_004458138.1|	-	1.8	8.6	5.3	4.1	7.5	3.7	1.6	1	1	0	1	1	1	0	2TM	domain
DUF4216	PF13952.1	gi|332796639|ref|YP_004458139.1|	-	0.0048	16.3	0.1	0.5	9.8	0.1	2.4	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4216)
MutS_II	PF05188.12	gi|332796639|ref|YP_004458139.1|	-	0.12	12.3	0.0	0.17	11.9	0.0	1.3	1	0	0	1	1	1	0	MutS	domain	II
DUF2642	PF10842.3	gi|332796639|ref|YP_004458139.1|	-	0.13	11.7	0.6	1.4	8.4	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2642)
DUF1404	PF07185.6	gi|332796641|ref|YP_004458141.1|	-	6.2e-55	185.3	18.6	7.1e-55	185.1	12.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
DUF4605	PF15378.1	gi|332796641|ref|YP_004458141.1|	-	0.7	9.6	5.9	3	7.5	0.2	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4605)
AA_permease_2	PF13520.1	gi|332796642|ref|YP_004458142.1|	-	4e-33	114.5	64.7	5.1e-33	114.2	44.9	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332796642|ref|YP_004458142.1|	-	5.5e-07	28.2	59.6	1.2e-06	27.1	41.3	1.6	1	1	0	1	1	1	1	Amino	acid	permease
MotA_ExbB	PF01618.11	gi|332796642|ref|YP_004458142.1|	-	0.16	11.6	2.2	0.31	10.6	0.0	2.5	3	0	0	3	3	3	0	MotA/TolQ/ExbB	proton	channel	family
7kD_DNA_binding	PF02294.13	gi|332796643|ref|YP_004458143.1|	-	1.4e-38	130.3	5.1	1.6e-38	130.1	3.5	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
DUF2960	PF11173.3	gi|332796643|ref|YP_004458143.1|	-	0.051	13.8	0.3	0.19	12.0	0.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2960)
Ribosomal_S5	PF00333.15	gi|332796643|ref|YP_004458143.1|	-	0.17	11.6	0.5	0.32	10.7	0.4	1.5	1	1	0	1	1	1	0	Ribosomal	protein	S5,	N-terminal	domain
Peptidase_S9	PF00326.16	gi|332796644|ref|YP_004458144.1|	-	1.9e-45	154.7	0.0	3e-45	154.0	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|332796644|ref|YP_004458144.1|	-	9.5e-15	54.6	0.0	1.4e-14	54.1	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|332796644|ref|YP_004458144.1|	-	3.7e-13	49.9	0.0	2.8e-12	46.9	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|332796644|ref|YP_004458144.1|	-	2.9e-12	46.3	0.0	1.2e-11	44.3	0.0	1.9	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
DPPIV_N	PF00930.16	gi|332796644|ref|YP_004458144.1|	-	2.1e-10	39.7	2.1	3.2e-05	22.6	0.2	2.7	1	1	1	2	2	2	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Abhydrolase_1	PF00561.15	gi|332796644|ref|YP_004458144.1|	-	7.7e-08	32.1	0.1	0.00045	19.8	0.1	2.4	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
BAAT_C	PF08840.6	gi|332796644|ref|YP_004458144.1|	-	6.7e-06	25.9	0.0	0.00027	20.7	0.0	2.3	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Esterase	PF00756.15	gi|332796644|ref|YP_004458144.1|	-	0.00038	19.9	0.0	0.00085	18.8	0.0	1.5	1	0	0	1	1	1	1	Putative	esterase
Peptidase_S15	PF02129.13	gi|332796644|ref|YP_004458144.1|	-	0.00065	19.2	0.0	0.014	14.7	0.1	2.4	2	1	1	3	3	3	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_3	PF07859.8	gi|332796644|ref|YP_004458144.1|	-	0.001	18.7	0.0	0.004	16.7	0.0	1.9	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
DUF2048	PF09752.4	gi|332796644|ref|YP_004458144.1|	-	0.0031	16.4	0.0	0.0074	15.1	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2048)
DUF829	PF05705.9	gi|332796644|ref|YP_004458144.1|	-	0.017	14.8	0.0	0.074	12.7	0.0	1.9	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF829)
Hydrolase_4	PF12146.3	gi|332796644|ref|YP_004458144.1|	-	0.023	14.5	0.0	0.92	9.3	0.0	2.6	2	0	0	2	2	2	0	Putative	lysophospholipase
PhoPQ_related	PF10142.4	gi|332796644|ref|YP_004458144.1|	-	0.033	12.6	0.0	0.11	10.9	0.0	1.8	1	1	0	1	1	1	0	PhoPQ-activated	pathogenicity-related	protein
Peptidase_S28	PF05577.7	gi|332796644|ref|YP_004458144.1|	-	0.038	12.5	0.0	0.067	11.7	0.0	1.3	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
Tannase	PF07519.6	gi|332796644|ref|YP_004458144.1|	-	0.038	12.7	0.0	0.073	11.7	0.0	1.4	1	0	0	1	1	1	0	Tannase	and	feruloyl	esterase
Abhydrolase_4	PF08386.5	gi|332796644|ref|YP_004458144.1|	-	0.042	13.7	0.0	0.076	12.9	0.0	1.3	1	0	0	1	1	1	0	TAP-like	protein
Kelch_3	PF13415.1	gi|332796644|ref|YP_004458144.1|	-	0.16	12.1	3.0	5.2	7.3	0.0	4.2	6	0	0	6	6	4	0	Galactose	oxidase,	central	domain
DUF4652	PF15525.1	gi|332796644|ref|YP_004458144.1|	-	0.95	8.8	9.1	2.2	7.6	1.1	3.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4652)
DUF4367	PF14285.1	gi|332796644|ref|YP_004458144.1|	-	9.1	5.5	14.0	0.4	9.9	3.7	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4367)
DUF87	PF01935.12	gi|332796645|ref|YP_004458145.1|	-	2.9e-21	76.3	5.1	4.5e-20	72.4	2.1	2.7	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|332796645|ref|YP_004458145.1|	-	2.3e-13	50.2	1.2	3.9e-13	49.5	0.9	1.4	1	0	0	1	1	1	1	AAA-like	domain
RAMPs	PF03787.10	gi|332796645|ref|YP_004458145.1|	-	6.7e-05	22.8	1.1	0.012	15.4	0.1	2.2	2	0	0	2	2	2	2	RAMP	superfamily
FtsK_SpoIIIE	PF01580.13	gi|332796645|ref|YP_004458145.1|	-	0.00019	20.9	0.0	0.65	9.4	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_25	PF13481.1	gi|332796645|ref|YP_004458145.1|	-	0.002	17.5	0.0	2	7.7	0.0	3.0	3	0	0	3	3	3	2	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|332796645|ref|YP_004458145.1|	-	0.0067	15.0	0.0	0.031	12.9	0.0	2.0	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.7	gi|332796645|ref|YP_004458145.1|	-	0.013	14.9	0.1	0.11	12.0	0.0	2.2	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_16	PF13191.1	gi|332796645|ref|YP_004458145.1|	-	0.14	12.1	0.1	21	5.0	0.0	2.5	2	0	0	2	2	2	0	AAA	ATPase	domain
NurA	PF09376.5	gi|332796646|ref|YP_004458146.1|	-	7.7e-13	48.4	1.1	1.6e-06	27.7	0.1	2.3	1	1	1	2	2	2	2	NurA	domain
Aldolase_2	PF10120.4	gi|332796647|ref|YP_004458147.1|	-	1e-44	151.9	0.3	1.4e-44	151.4	0.2	1.2	1	0	0	1	1	1	1	Putative	aldolase
HTH_37	PF13744.1	gi|332796647|ref|YP_004458147.1|	-	0.0004	20.1	0.0	0.00083	19.1	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|332796647|ref|YP_004458147.1|	-	0.00062	19.2	0.1	0.16	11.5	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|332796647|ref|YP_004458147.1|	-	0.016	15.0	0.1	0.034	13.9	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix
Sigma70_r4_2	PF08281.7	gi|332796647|ref|YP_004458147.1|	-	0.035	13.5	0.0	0.085	12.3	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
RepB	PF07506.6	gi|332796647|ref|YP_004458147.1|	-	0.037	13.9	0.0	0.093	12.5	0.0	1.6	1	1	0	1	1	1	0	RepB	plasmid	partitioning	protein
HTH_23	PF13384.1	gi|332796647|ref|YP_004458147.1|	-	0.096	12.3	0.0	0.2	11.3	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
MMPL	PF03176.10	gi|332796648|ref|YP_004458148.1|	-	1.3e-49	168.7	20.7	1.6e-28	99.4	5.1	2.2	2	0	0	2	2	2	2	MMPL	family
Imm42	PF15601.1	gi|332796649|ref|YP_004458149.1|	-	0.088	12.2	0.1	0.088	12.2	0.1	1.2	1	0	0	1	1	1	0	Immunity	protein	42
TelA	PF05816.6	gi|332796649|ref|YP_004458149.1|	-	0.091	11.4	0.1	0.091	11.4	0.1	1.0	1	0	0	1	1	1	0	Toxic	anion	resistance	protein	(TelA)
EST1	PF10374.4	gi|332796650|ref|YP_004458150.1|	-	0.2	11.6	3.5	0.34	10.9	2.4	1.6	1	1	0	1	1	1	0	Telomerase	activating	protein	Est1
Peptidase_M50	PF02163.17	gi|332796651|ref|YP_004458151.1|	-	5.1e-12	45.1	17.8	4.8e-11	41.9	12.4	2.6	1	1	0	1	1	1	1	Peptidase	family	M50
FA_desaturase	PF00487.19	gi|332796651|ref|YP_004458151.1|	-	0.66	9.3	14.3	0.27	10.6	0.3	2.4	1	1	1	2	2	2	0	Fatty	acid	desaturase
Rhomboid	PF01694.17	gi|332796652|ref|YP_004458152.1|	-	6.9e-20	71.5	10.4	6.9e-20	71.5	7.2	1.9	2	0	0	2	2	2	1	Rhomboid	family
DUF973	PF06157.6	gi|332796653|ref|YP_004458153.1|	-	0.0052	15.7	4.0	0.0052	15.7	2.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
AAA_18	PF13238.1	gi|332796654|ref|YP_004458154.1|	-	7.1e-19	68.3	0.9	1.4e-18	67.4	0.1	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|332796654|ref|YP_004458154.1|	-	3.3e-14	53.7	0.2	4.9e-14	53.1	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|332796654|ref|YP_004458154.1|	-	3.6e-05	23.6	0.0	0.00079	19.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|332796654|ref|YP_004458154.1|	-	5.8e-05	23.2	0.1	0.00042	20.5	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SKI	PF01202.17	gi|332796654|ref|YP_004458154.1|	-	0.0007	19.4	0.0	0.0011	18.8	0.0	1.3	1	0	0	1	1	1	1	Shikimate	kinase
AAA_28	PF13521.1	gi|332796654|ref|YP_004458154.1|	-	0.0036	17.2	0.0	0.0079	16.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|332796654|ref|YP_004458154.1|	-	0.005	16.0	0.3	0.012	14.8	0.0	1.8	2	1	0	2	2	2	1	Chromatin	associated	protein	KTI12
AAA_5	PF07728.9	gi|332796654|ref|YP_004458154.1|	-	0.0051	16.5	0.0	0.0097	15.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Pyr_excise	PF03013.9	gi|332796654|ref|YP_004458154.1|	-	0.013	15.2	0.2	0.075	12.7	0.0	1.9	2	0	0	2	2	2	0	Pyrimidine	dimer	DNA	glycosylase
AAA_22	PF13401.1	gi|332796654|ref|YP_004458154.1|	-	0.015	15.4	0.0	0.025	14.7	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Imm3	PF14425.1	gi|332796654|ref|YP_004458154.1|	-	0.021	14.8	4.6	0.12	12.3	0.5	2.3	1	1	1	2	2	2	0	Immunity	protein	Imm3
DUF2481	PF10654.4	gi|332796654|ref|YP_004458154.1|	-	0.027	14.1	1.6	0.056	13.1	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2481)
Zeta_toxin	PF06414.7	gi|332796654|ref|YP_004458154.1|	-	0.028	13.5	0.0	0.062	12.3	0.0	1.7	1	1	0	1	1	1	0	Zeta	toxin
RuvB_N	PF05496.7	gi|332796654|ref|YP_004458154.1|	-	0.03	13.3	0.1	0.066	12.2	0.0	1.8	2	1	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
NTPase_1	PF03266.10	gi|332796654|ref|YP_004458154.1|	-	0.031	14.0	0.4	0.11	12.2	0.0	2.1	1	1	0	2	2	2	0	NTPase
RNA_helicase	PF00910.17	gi|332796654|ref|YP_004458154.1|	-	0.032	14.4	0.1	0.091	12.9	0.0	1.8	2	0	0	2	2	2	0	RNA	helicase
PRK	PF00485.13	gi|332796654|ref|YP_004458154.1|	-	0.034	13.7	0.0	0.048	13.2	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_19	PF13245.1	gi|332796654|ref|YP_004458154.1|	-	0.058	13.1	0.1	1	9.1	0.2	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|332796654|ref|YP_004458154.1|	-	0.067	13.1	0.2	0.1	12.6	0.1	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_26	PF13500.1	gi|332796654|ref|YP_004458154.1|	-	0.1	12.2	0.7	0.33	10.5	0.2	2.0	2	1	1	3	3	3	0	AAA	domain
KaiC	PF06745.8	gi|332796654|ref|YP_004458154.1|	-	0.61	9.1	2.5	15	4.6	0.1	2.3	1	1	0	2	2	2	0	KaiC
ParA	PF10609.4	gi|332796655|ref|YP_004458155.1|	-	5.7e-31	106.2	0.1	1.4e-30	105.0	0.0	1.7	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|332796655|ref|YP_004458155.1|	-	3.6e-17	62.4	0.1	5.7e-17	61.7	0.1	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|332796655|ref|YP_004458155.1|	-	1.4e-08	34.8	0.0	1.8e-06	27.9	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
Fer4_NifH	PF00142.13	gi|332796655|ref|YP_004458155.1|	-	2.2e-08	33.6	0.1	1.2e-05	24.6	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
MipZ	PF09140.6	gi|332796655|ref|YP_004458155.1|	-	2e-06	27.0	0.0	3.4e-06	26.3	0.0	1.4	1	1	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|332796655|ref|YP_004458155.1|	-	3e-06	26.5	2.0	7.4e-05	21.9	0.8	2.2	2	0	0	2	2	2	1	Anion-transporting	ATPase
ArgK	PF03308.11	gi|332796655|ref|YP_004458155.1|	-	0.00057	18.7	0.2	0.00092	18.0	0.1	1.3	1	0	0	1	1	1	1	ArgK	protein
AAA_10	PF12846.2	gi|332796655|ref|YP_004458155.1|	-	0.00074	19.0	0.1	0.001	18.5	0.1	1.3	1	0	0	1	1	1	1	AAA-like	domain
AAA_26	PF13500.1	gi|332796655|ref|YP_004458155.1|	-	0.0072	15.9	0.0	2.4	7.6	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|332796655|ref|YP_004458155.1|	-	0.014	14.7	0.1	0.03	13.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|332796655|ref|YP_004458155.1|	-	0.11	11.6	0.1	0.17	11.0	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
IstB_IS21	PF01695.12	gi|332796655|ref|YP_004458155.1|	-	0.18	11.2	0.0	0.36	10.2	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF2153	PF09921.4	gi|332796656|ref|YP_004458156.1|	-	0.00045	19.8	0.1	0.0005	19.6	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
EAP30	PF04157.11	gi|332796656|ref|YP_004458156.1|	-	0.018	14.2	0.1	0.02	14.0	0.0	1.0	1	0	0	1	1	1	0	EAP30/Vps36	family
IMCp	PF12314.3	gi|332796656|ref|YP_004458156.1|	-	0.03	14.4	0.8	0.038	14.1	0.6	1.1	1	0	0	1	1	1	0	Inner	membrane	complex	protein
DUF3581	PF12119.3	gi|332796656|ref|YP_004458156.1|	-	0.058	12.6	0.1	0.062	12.5	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3581)
FeoC	PF09012.5	gi|332796656|ref|YP_004458156.1|	-	0.086	12.5	0.0	0.1	12.3	0.0	1.1	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
RE_HpaII	PF09561.5	gi|332796656|ref|YP_004458156.1|	-	0.089	11.9	0.2	0.095	11.8	0.1	1.1	1	0	0	1	1	1	0	HpaII	restriction	endonuclease
Arg_repressor	PF01316.16	gi|332796656|ref|YP_004458156.1|	-	0.28	10.7	1.4	0.38	10.3	1.0	1.4	1	1	0	1	1	1	0	Arginine	repressor,	DNA	binding	domain
TrmB	PF01978.14	gi|332796657|ref|YP_004458157.1|	-	1.1e-14	53.9	0.1	2.6e-14	52.6	0.0	1.6	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|332796657|ref|YP_004458157.1|	-	1.6e-08	34.0	0.0	2.7e-08	33.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|332796657|ref|YP_004458157.1|	-	8.1e-07	28.5	0.1	8.5e-07	28.4	0.0	1.0	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|332796657|ref|YP_004458157.1|	-	2.8e-06	26.9	0.1	4.6e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|332796657|ref|YP_004458157.1|	-	0.00012	22.2	0.1	0.00025	21.2	0.0	1.6	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|332796657|ref|YP_004458157.1|	-	0.00013	21.5	0.4	0.00038	20.0	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|332796657|ref|YP_004458157.1|	-	0.00021	20.6	0.1	0.00035	19.8	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|332796657|ref|YP_004458157.1|	-	0.00022	21.1	0.1	0.00052	19.8	0.0	1.7	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|332796657|ref|YP_004458157.1|	-	0.00068	19.7	0.1	0.0011	19.0	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_CodY	PF08222.6	gi|332796657|ref|YP_004458157.1|	-	0.00091	18.5	0.4	0.0014	17.9	0.2	1.4	1	1	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_20	PF12840.2	gi|332796657|ref|YP_004458157.1|	-	0.0011	18.6	0.0	0.0017	18.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332796657|ref|YP_004458157.1|	-	0.0015	18.4	0.0	0.0023	17.8	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|332796657|ref|YP_004458157.1|	-	0.0015	18.0	0.2	0.0036	16.8	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_Crp_2	PF13545.1	gi|332796657|ref|YP_004458157.1|	-	0.002	17.8	0.0	0.0032	17.2	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|332796657|ref|YP_004458157.1|	-	0.0048	16.7	0.1	0.007	16.2	0.1	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Cdc6_C	PF09079.6	gi|332796657|ref|YP_004458157.1|	-	0.0092	15.6	0.0	0.017	14.8	0.0	1.5	1	0	0	1	1	1	1	CDC6,	C	terminal
ArsR	PF09824.4	gi|332796657|ref|YP_004458157.1|	-	0.011	15.0	0.0	0.013	14.8	0.0	1.1	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
HTH_36	PF13730.1	gi|332796657|ref|YP_004458157.1|	-	0.022	14.8	0.2	0.039	14.0	0.1	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
PadR	PF03551.9	gi|332796657|ref|YP_004458157.1|	-	0.023	14.4	0.0	0.034	13.9	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
Integrase_1	PF12835.2	gi|332796657|ref|YP_004458157.1|	-	0.025	14.3	0.0	0.036	13.8	0.0	1.4	1	1	0	1	1	1	0	Integrase
KH_5	PF13184.1	gi|332796657|ref|YP_004458157.1|	-	0.034	13.9	0.5	0.075	12.8	0.4	1.7	1	1	0	1	1	1	0	NusA-like	KH	domain
HTH_23	PF13384.1	gi|332796657|ref|YP_004458157.1|	-	0.043	13.4	0.0	0.081	12.6	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
B-block_TFIIIC	PF04182.7	gi|332796657|ref|YP_004458157.1|	-	0.047	13.5	0.0	0.055	13.3	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
GPP34	PF05719.6	gi|332796657|ref|YP_004458157.1|	-	0.05	13.6	0.0	0.054	13.5	0.0	1.0	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
RPA_C	PF08784.6	gi|332796657|ref|YP_004458157.1|	-	0.059	13.7	0.0	0.11	12.9	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_45	PF14947.1	gi|332796657|ref|YP_004458157.1|	-	0.078	12.7	0.1	0.47	10.2	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_28	PF13518.1	gi|332796657|ref|YP_004458157.1|	-	0.094	12.7	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|332796657|ref|YP_004458157.1|	-	0.1	12.7	0.0	0.13	12.3	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_IclR	PF09339.5	gi|332796657|ref|YP_004458157.1|	-	0.12	11.9	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
LysE	PF01810.13	gi|332796658|ref|YP_004458158.1|	-	3.7e-24	85.0	13.2	4.6e-24	84.7	9.1	1.1	1	0	0	1	1	1	1	LysE	type	translocator
DctQ	PF04290.7	gi|332796658|ref|YP_004458158.1|	-	0.032	13.9	0.1	0.032	13.9	0.1	2.6	1	1	1	2	2	2	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
DPM3	PF08285.6	gi|332796658|ref|YP_004458158.1|	-	3.4	7.5	5.3	1.9	8.3	1.0	2.3	2	0	0	2	2	2	0	Dolichol-phosphate	mannosyltransferase	subunit	3	(DPM3)
DUF1240	PF06836.7	gi|332796658|ref|YP_004458158.1|	-	4.6	7.5	7.6	40	4.5	2.9	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1240)
HTH_7	PF02796.10	gi|332796659|ref|YP_004458159.1|	-	5.3e-19	67.7	10.1	9.1e-08	31.8	0.4	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain	of	resolvase
HTH_38	PF13936.1	gi|332796659|ref|YP_004458159.1|	-	2.8e-17	61.9	6.3	3.6e-07	29.6	0.2	3.1	3	0	0	3	3	3	3	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|332796659|ref|YP_004458159.1|	-	1.3e-16	59.6	0.3	8.6e-07	28.4	0.0	3.2	2	1	1	3	3	3	3	Homeodomain-like	domain
HTH_28	PF13518.1	gi|332796659|ref|YP_004458159.1|	-	5.4e-13	48.6	0.5	0.00031	20.6	0.0	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|332796659|ref|YP_004458159.1|	-	1.3e-11	43.7	3.3	0.00027	20.3	0.1	3.1	3	0	0	3	3	3	2	Sigma-70,	region	4
HTH_40	PF14493.1	gi|332796659|ref|YP_004458159.1|	-	1.4e-08	34.7	5.0	0.11	12.7	0.2	3.3	2	1	1	3	3	3	3	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|332796659|ref|YP_004458159.1|	-	1.1e-07	31.1	1.5	0.0074	15.6	0.0	3.4	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
GerE	PF00196.14	gi|332796659|ref|YP_004458159.1|	-	1.5e-07	30.6	4.3	0.17	11.2	0.0	3.2	2	1	1	3	3	3	3	Bacterial	regulatory	proteins,	luxR	family
HTH_5	PF01022.15	gi|332796659|ref|YP_004458159.1|	-	2.8e-07	30.0	0.8	0.094	12.4	0.0	3.5	3	1	0	3	3	3	2	Bacterial	regulatory	protein,	arsR	family
Terminase_5	PF06056.7	gi|332796659|ref|YP_004458159.1|	-	3.7e-07	29.5	0.5	0.34	10.4	0.0	3.1	3	0	0	3	3	3	2	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_Tnp_IS630	PF01710.11	gi|332796659|ref|YP_004458159.1|	-	4.8e-07	29.4	7.1	6.4e-06	25.8	2.3	2.1	2	0	0	2	2	2	1	Transposase
HTH_29	PF13551.1	gi|332796659|ref|YP_004458159.1|	-	1.1e-06	28.7	0.2	0.1	12.7	0.0	3.1	3	0	0	3	3	3	2	Winged	helix-turn	helix
GcrA	PF07750.6	gi|332796659|ref|YP_004458159.1|	-	1.2e-06	28.8	0.5	0.029	14.5	0.0	2.8	1	1	1	2	2	2	2	GcrA	cell	cycle	regulator
HTH_Tnp_ISL3	PF13542.1	gi|332796659|ref|YP_004458159.1|	-	2.6e-06	26.4	0.0	0.077	12.1	0.0	3.0	3	0	0	3	3	3	2	Helix-turn-helix	domain	of	transposase	family	ISL3
IF2_N	PF04760.10	gi|332796659|ref|YP_004458159.1|	-	4.2e-06	26.3	14.9	0.056	13.1	0.2	4.0	3	1	2	5	5	4	3	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_Tnp_IS1	PF12759.2	gi|332796659|ref|YP_004458159.1|	-	5.3e-06	25.7	0.1	0.43	10.0	0.0	3.1	3	0	0	3	3	3	2	InsA	C-terminal	domain
TrmB	PF01978.14	gi|332796659|ref|YP_004458159.1|	-	6e-06	25.8	5.3	0.022	14.4	0.0	3.3	2	1	1	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_10	PF04967.7	gi|332796659|ref|YP_004458159.1|	-	8.5e-06	25.2	1.6	0.74	9.4	0.0	3.4	3	0	0	3	3	3	2	HTH	DNA	binding	domain
Sigma70_ECF	PF07638.6	gi|332796659|ref|YP_004458159.1|	-	1.1e-05	25.1	1.7	0.16	11.6	0.1	2.9	1	1	2	3	3	3	2	ECF	sigma	factor
Sigma70_r4	PF04545.11	gi|332796659|ref|YP_004458159.1|	-	2.6e-05	23.4	0.8	0.0026	17.0	0.1	2.9	3	0	0	3	3	3	1	Sigma-70,	region	4
DUF2316	PF10078.4	gi|332796659|ref|YP_004458159.1|	-	3.7e-05	23.6	2.0	0.041	13.8	0.1	3.1	1	1	2	3	3	3	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
Recombinase	PF07508.8	gi|332796659|ref|YP_004458159.1|	-	3.7e-05	23.8	5.5	0.19	11.9	0.2	3.4	3	1	0	3	3	3	1	Recombinase
ANT	PF03374.9	gi|332796659|ref|YP_004458159.1|	-	4.5e-05	23.4	2.5	0.0048	16.9	0.1	3.0	1	1	2	3	3	3	1	Phage	antirepressor	protein	KilAC	domain
HTH_Tnp_1	PF01527.15	gi|332796659|ref|YP_004458159.1|	-	8.8e-05	22.3	0.7	0.21	11.5	0.0	3.0	3	0	0	3	3	3	1	Transposase
PAX	PF00292.13	gi|332796659|ref|YP_004458159.1|	-	0.00015	21.4	0.1	0.044	13.4	0.0	2.8	1	1	2	3	3	3	1	'Paired	box'	domain
NUMOD1	PF07453.8	gi|332796659|ref|YP_004458159.1|	-	0.00042	20.0	4.1	0.22	11.4	0.0	3.2	3	0	0	3	3	3	1	NUMOD1	domain
HTH_11	PF08279.7	gi|332796659|ref|YP_004458159.1|	-	0.00052	19.6	2.8	0.37	10.4	0.1	3.3	3	1	0	3	3	3	1	HTH	domain
Rho_N	PF07498.7	gi|332796659|ref|YP_004458159.1|	-	0.00083	19.0	2.9	5.6	6.8	0.1	4.0	3	0	0	3	3	3	0	Rho	termination	factor,	N-terminal	domain
Sigma70_r3	PF04539.11	gi|332796659|ref|YP_004458159.1|	-	0.00098	18.9	0.8	0.025	14.4	0.0	3.2	3	1	1	4	4	3	1	Sigma-70	region	3
Rrf2	PF02082.15	gi|332796659|ref|YP_004458159.1|	-	0.0011	19.0	3.6	3.7	7.7	0.0	3.2	3	0	0	3	3	3	0	Transcriptional	regulator
HTH_9	PF08221.6	gi|332796659|ref|YP_004458159.1|	-	0.0012	18.7	1.8	0.24	11.2	0.0	3.3	3	1	0	3	3	3	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
RPA_C	PF08784.6	gi|332796659|ref|YP_004458159.1|	-	0.0034	17.7	0.4	2.1	8.8	0.0	3.2	1	1	2	4	4	3	0	Replication	protein	A	C	terminal
HTH_17	PF12728.2	gi|332796659|ref|YP_004458159.1|	-	0.0055	16.9	1.9	0.82	9.9	0.0	2.9	3	0	0	3	3	2	1	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|332796659|ref|YP_004458159.1|	-	0.006	16.3	0.0	5.2	6.9	0.0	3.1	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_30	PF13556.1	gi|332796659|ref|YP_004458159.1|	-	0.006	16.1	0.0	0.88	9.2	0.0	2.9	3	0	0	3	3	3	1	PucR	C-terminal	helix-turn-helix	domain
MarR	PF01047.17	gi|332796659|ref|YP_004458159.1|	-	0.0072	16.0	0.3	11	5.8	0.0	3.3	3	0	0	3	3	3	0	MarR	family
Phage_terminase	PF10668.4	gi|332796659|ref|YP_004458159.1|	-	0.0073	16.0	3.4	0.075	12.8	0.2	2.7	3	0	0	3	3	2	1	Phage	terminase	small	subunit
HTH_Tnp_Tc3_1	PF11427.3	gi|332796659|ref|YP_004458159.1|	-	0.01	15.4	2.4	0.79	9.4	0.2	2.4	2	0	0	2	2	2	0	Tc3	transposase
HTH_6	PF01418.12	gi|332796659|ref|YP_004458159.1|	-	0.01	15.5	0.8	5.6	6.7	0.0	3.2	1	1	1	3	3	3	0	Helix-turn-helix	domain,	rpiR	family
DivIC	PF04977.10	gi|332796659|ref|YP_004458159.1|	-	0.01	15.2	1.2	0.01	15.2	0.8	2.8	2	1	0	2	2	2	0	Septum	formation	initiator
FumaraseC_C	PF10415.4	gi|332796659|ref|YP_004458159.1|	-	0.011	15.7	0.8	0.99	9.5	0.0	3.2	2	1	1	3	3	3	0	Fumarase	C	C-terminus
DUF2089	PF09862.4	gi|332796659|ref|YP_004458159.1|	-	0.011	15.4	5.9	0.9	9.3	0.9	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
Ribosomal_S13_N	PF08069.7	gi|332796659|ref|YP_004458159.1|	-	0.012	15.4	3.2	0.22	11.4	0.0	2.7	3	0	0	3	3	2	0	Ribosomal	S13/S15	N-terminal	domain
Homeobox	PF00046.24	gi|332796659|ref|YP_004458159.1|	-	0.012	15.2	1.5	1	8.9	0.1	3.2	2	1	1	3	3	3	0	Homeobox	domain
MerR_1	PF13411.1	gi|332796659|ref|YP_004458159.1|	-	0.019	14.7	9.5	3.3	7.5	0.1	3.9	3	1	1	4	4	4	0	MerR	HTH	family	regulatory	protein
DUF1699	PF08004.6	gi|332796659|ref|YP_004458159.1|	-	0.02	14.4	9.9	1.6	8.2	0.3	3.1	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1699)
CENP-B_N	PF04218.8	gi|332796659|ref|YP_004458159.1|	-	0.022	14.1	9.6	0.028	13.8	0.3	3.3	2	1	1	3	3	3	0	CENP-B	N-terminal	DNA-binding	domain
DUF2774	PF11242.3	gi|332796659|ref|YP_004458159.1|	-	0.024	14.6	0.9	9.8	6.2	0.0	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2774)
SurA_N	PF09312.6	gi|332796659|ref|YP_004458159.1|	-	0.025	14.4	0.2	0.098	12.5	0.0	2.0	1	1	1	2	2	2	0	SurA	N-terminal	domain
HTH_3	PF01381.17	gi|332796659|ref|YP_004458159.1|	-	0.025	14.3	4.2	1.3	8.9	0.1	3.6	3	1	0	3	3	3	0	Helix-turn-helix
HTH_25	PF13413.1	gi|332796659|ref|YP_004458159.1|	-	0.027	14.1	0.4	20	4.9	0.0	3.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|332796659|ref|YP_004458159.1|	-	0.03	13.9	0.0	9.6	5.9	0.0	3.0	3	0	0	3	3	3	0	MarR	family
LexA_DNA_bind	PF01726.11	gi|332796659|ref|YP_004458159.1|	-	0.034	13.7	0.0	32	4.1	0.0	3.1	3	0	0	3	3	3	0	LexA	DNA	binding	domain
HTH_21	PF13276.1	gi|332796659|ref|YP_004458159.1|	-	0.038	13.9	5.2	0.57	10.2	3.3	3.0	2	1	0	2	2	1	0	HTH-like	domain
TetR_N	PF00440.18	gi|332796659|ref|YP_004458159.1|	-	0.04	13.5	0.0	7	6.3	0.0	2.9	3	0	0	3	3	2	0	Bacterial	regulatory	proteins,	tetR	family
GPAT_N	PF14829.1	gi|332796659|ref|YP_004458159.1|	-	0.048	13.3	1.1	0.12	12.1	0.7	1.8	1	1	0	1	1	1	0	Glycerol-3-phosphate	acyltransferase	N-terminal
B-block_TFIIIC	PF04182.7	gi|332796659|ref|YP_004458159.1|	-	0.05	13.4	1.4	0.65	9.8	0.0	2.7	3	0	0	3	3	3	0	B-block	binding	subunit	of	TFIIIC
SpoIIID	PF12116.3	gi|332796659|ref|YP_004458159.1|	-	0.051	13.5	4.4	0.081	12.8	0.2	2.5	1	1	2	3	3	3	0	Stage	III	sporulation	protein	D
HTH_26	PF13443.1	gi|332796659|ref|YP_004458159.1|	-	0.055	13.6	6.9	5.8	7.1	0.5	3.3	2	1	1	3	3	3	0	Cro/C1-type	HTH	DNA-binding	domain
DegV	PF02645.11	gi|332796659|ref|YP_004458159.1|	-	0.058	12.4	2.2	1.4	7.9	0.1	2.6	2	1	1	3	3	3	0	Uncharacterised	protein,	DegV	family	COG1307
RepB	PF07506.6	gi|332796659|ref|YP_004458159.1|	-	0.072	12.9	0.2	2.2	8.1	0.0	2.2	1	1	1	2	2	2	0	RepB	plasmid	partitioning	protein
FeoC	PF09012.5	gi|332796659|ref|YP_004458159.1|	-	0.079	12.6	0.5	15	5.4	0.0	3.1	2	1	1	3	3	3	0	FeoC	like	transcriptional	regulator
Pescadillo_N	PF06732.6	gi|332796659|ref|YP_004458159.1|	-	0.094	11.9	8.6	0.11	11.7	6.0	1.1	1	0	0	1	1	1	0	Pescadillo	N-terminus
CPSase_L_D3	PF02787.14	gi|332796659|ref|YP_004458159.1|	-	0.15	11.8	6.8	4	7.2	1.6	2.7	1	1	1	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
LacI	PF00356.16	gi|332796659|ref|YP_004458159.1|	-	0.16	11.5	2.5	3.1	7.4	0.0	3.0	4	0	0	4	4	2	0	Bacterial	regulatory	proteins,	lacI	family
DUF2095	PF09868.4	gi|332796659|ref|YP_004458159.1|	-	0.17	11.6	2.4	9.9	5.9	0.2	2.7	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
DUF3791	PF12668.2	gi|332796659|ref|YP_004458159.1|	-	0.18	11.4	5.0	5.1	6.7	0.0	3.5	4	0	0	4	4	3	0	Protein	of	unknown	function	(DUF3791)
Mga	PF05043.8	gi|332796659|ref|YP_004458159.1|	-	0.2	11.9	5.4	19	5.6	0.0	3.1	1	1	2	3	3	3	0	Mga	helix-turn-helix	domain
Phage_antitermQ	PF06530.7	gi|332796659|ref|YP_004458159.1|	-	0.28	10.7	5.1	5.2	6.6	0.1	2.6	1	1	2	3	3	3	0	Phage	antitermination	protein	Q
Trp_repressor	PF01371.14	gi|332796659|ref|YP_004458159.1|	-	0.35	10.8	3.2	5.8	6.8	0.0	2.9	1	1	2	3	3	3	0	Trp	repressor	protein
HTH_36	PF13730.1	gi|332796659|ref|YP_004458159.1|	-	0.36	10.9	4.6	2	8.6	0.1	3.2	3	1	0	3	3	3	0	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|332796659|ref|YP_004458159.1|	-	0.39	10.8	9.2	5.2	7.2	0.8	3.0	1	1	0	2	2	2	0	Helix-turn-helix	domain
DUF3137	PF11335.3	gi|332796659|ref|YP_004458159.1|	-	0.48	10.0	3.7	1.5	8.4	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3137)
Bot1p	PF12298.3	gi|332796659|ref|YP_004458159.1|	-	0.65	9.9	8.5	24	4.8	5.7	2.4	1	1	0	1	1	1	0	Eukaryotic	mitochondrial	regulator	protein
GatB_Yqey	PF02637.13	gi|332796659|ref|YP_004458159.1|	-	0.95	9.1	9.5	2.8	7.6	0.4	2.7	1	1	2	3	3	3	0	GatB	domain
CcmH	PF03918.9	gi|332796659|ref|YP_004458159.1|	-	1	8.3	4.1	3.2	6.7	0.2	2.6	3	0	0	3	3	3	0	Cytochrome	C	biogenesis	protein
DUF771	PF05595.6	gi|332796659|ref|YP_004458159.1|	-	1.2	9.0	8.2	0.77	9.7	0.5	2.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF771)
tRNA-synt_1b	PF00579.20	gi|332796660|ref|YP_004458160.1|	-	2.8e-29	102.1	0.0	3.9e-29	101.7	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Lac_bphage_repr	PF06543.7	gi|332796660|ref|YP_004458160.1|	-	0.1	12.1	0.2	1.3	8.6	0.0	2.5	2	0	0	2	2	2	0	Lactococcus	bacteriophage	repressor
PhosphMutase	PF10143.4	gi|332796660|ref|YP_004458160.1|	-	0.15	11.7	0.0	0.45	10.1	0.0	1.8	1	0	0	1	1	1	0	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
LOH1CR12	PF10158.4	gi|332796661|ref|YP_004458161.1|	-	0.0049	16.6	0.6	0.0087	15.8	0.4	1.4	1	0	0	1	1	1	1	Tumour	suppressor	protein
Snf7	PF03357.16	gi|332796661|ref|YP_004458161.1|	-	0.034	13.5	4.4	0.042	13.2	3.1	1.4	1	1	0	1	1	1	0	Snf7
Pox_F11	PF04943.7	gi|332796661|ref|YP_004458161.1|	-	0.035	12.9	0.1	0.036	12.9	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
HK97-gp10_like	PF04883.7	gi|332796661|ref|YP_004458161.1|	-	0.047	14.6	1.8	0.12	13.3	0.1	2.2	2	0	0	2	2	2	0	Bacteriophage	HK97-gp10,	putative	tail-component
DivIVA	PF05103.8	gi|332796661|ref|YP_004458161.1|	-	0.093	12.7	1.8	0.96	9.4	0.6	2.2	2	0	0	2	2	2	0	DivIVA	protein
CS	PF04969.11	gi|332796662|ref|YP_004458162.1|	-	0.0011	19.4	1.0	0.0015	19.0	0.7	1.1	1	0	0	1	1	1	1	CS	domain
tRNA-synt_2c	PF01411.14	gi|332796663|ref|YP_004458163.1|	-	9.7e-15	53.8	0.5	1.3e-14	53.4	0.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|332796663|ref|YP_004458163.1|	-	7.1e-11	41.8	0.3	1.3e-10	40.9	0.2	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DUF4179	PF13786.1	gi|332796663|ref|YP_004458163.1|	-	0.62	10.3	2.8	11	6.2	0.7	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4179)
GtrA	PF04138.9	gi|332796664|ref|YP_004458164.1|	-	2.1e-19	69.5	16.2	4.7e-19	68.4	11.2	1.5	1	1	0	1	1	1	1	GtrA-like	protein
UPF0640	PF15114.1	gi|332796664|ref|YP_004458164.1|	-	0.16	11.5	1.0	0.26	10.7	0.3	1.7	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0640
DUF4018	PF13210.1	gi|332796664|ref|YP_004458164.1|	-	0.69	9.2	14.0	0.11	11.8	6.9	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4018)
Aminotran_1_2	PF00155.16	gi|332796665|ref|YP_004458165.1|	-	3e-16	59.3	0.0	2.5e-15	56.3	0.0	2.0	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
HTH_10	PF04967.7	gi|332796666|ref|YP_004458166.1|	-	1e-20	73.0	0.2	1.7e-20	72.2	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
IF2_N	PF04760.10	gi|332796666|ref|YP_004458166.1|	-	0.0005	19.6	1.9	0.0013	18.3	0.2	2.6	2	1	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_24	PF13412.1	gi|332796666|ref|YP_004458166.1|	-	0.00078	18.7	1.4	0.0015	17.8	0.3	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AraC	PF00165.18	gi|332796666|ref|YP_004458166.1|	-	0.0013	18.5	0.0	0.016	14.9	0.0	2.5	1	1	1	2	2	2	1	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
MarR_2	PF12802.2	gi|332796666|ref|YP_004458166.1|	-	0.0051	16.4	0.0	0.0091	15.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|332796666|ref|YP_004458166.1|	-	0.0055	16.3	0.0	0.012	15.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Homeobox	PF00046.24	gi|332796666|ref|YP_004458166.1|	-	0.0056	16.2	0.0	0.014	15.0	0.0	1.6	1	0	0	1	1	1	1	Homeobox	domain
HTH_3	PF01381.17	gi|332796666|ref|YP_004458166.1|	-	0.0098	15.7	0.0	0.028	14.2	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix
Sigma70_r4	PF04545.11	gi|332796666|ref|YP_004458166.1|	-	0.02	14.1	0.2	0.06	12.6	0.1	1.8	1	1	0	1	1	1	0	Sigma-70,	region	4
PCI	PF01399.22	gi|332796666|ref|YP_004458166.1|	-	0.035	14.4	1.1	0.066	13.5	0.3	1.8	2	0	0	2	2	2	0	PCI	domain
Sigma70_r3	PF04539.11	gi|332796666|ref|YP_004458166.1|	-	0.04	13.8	0.2	0.098	12.5	0.1	1.7	1	0	0	1	1	1	0	Sigma-70	region	3
Phage_int_SAM_3	PF14659.1	gi|332796669|ref|YP_004458169.1|	-	0.00041	20.5	0.2	0.0011	19.2	0.1	1.8	1	0	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Vpu	PF00558.14	gi|332796669|ref|YP_004458169.1|	-	0.36	10.3	4.2	0.24	10.9	0.5	2.3	2	0	0	2	2	2	0	Vpu	protein
CwfJ_C_2	PF04676.9	gi|332796669|ref|YP_004458169.1|	-	0.42	11.1	4.2	1.4	9.4	2.2	2.1	2	0	0	2	2	2	0	Protein	similar	to	CwfJ	C-terminus	2
AA_permease_2	PF13520.1	gi|332796670|ref|YP_004458170.1|	-	6.3e-27	94.1	53.2	6.3e-27	94.1	36.8	2.0	1	1	1	2	2	2	2	Amino	acid	permease
AA_permease	PF00324.16	gi|332796670|ref|YP_004458170.1|	-	5.7e-12	44.7	54.5	5.7e-12	44.7	37.8	1.6	1	1	1	2	2	2	1	Amino	acid	permease
NS3_envE	PF02723.9	gi|332796671|ref|YP_004458171.1|	-	3.3	7.6	7.1	5.7	6.9	4.7	1.5	1	1	0	1	1	1	0	Non-structural	protein	NS3/Small	envelope	protein	E
DUF2964	PF11177.3	gi|332796672|ref|YP_004458172.1|	-	0.0026	17.6	4.0	0.0058	16.5	2.8	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2964)
Polysacc_synt_3	PF13440.1	gi|332796672|ref|YP_004458172.1|	-	0.0042	16.5	3.6	0.0043	16.5	2.5	1.0	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
Claudin_2	PF13903.1	gi|332796672|ref|YP_004458172.1|	-	0.014	15.0	1.2	0.017	14.8	0.8	1.1	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF981	PF06168.6	gi|332796672|ref|YP_004458172.1|	-	0.022	14.5	4.5	0.026	14.3	3.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF981)
TMEM169	PF15052.1	gi|332796672|ref|YP_004458172.1|	-	0.026	14.4	1.3	0.036	13.9	0.8	1.3	1	1	0	1	1	1	0	TMEM169	protein	family
SieB	PF14163.1	gi|332796672|ref|YP_004458172.1|	-	0.052	13.1	2.6	0.045	13.3	1.1	1.5	1	1	0	1	1	1	0	Superinfection	exclusion	protein	B
DUF373	PF04123.8	gi|332796672|ref|YP_004458172.1|	-	0.071	12.1	2.3	0.08	11.9	1.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DUF2116	PF09889.4	gi|332796672|ref|YP_004458172.1|	-	0.11	12.3	0.0	0.22	11.3	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF1622	PF07784.6	gi|332796672|ref|YP_004458172.1|	-	0.12	12.0	1.2	0.16	11.6	0.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1622)
PIRT	PF15099.1	gi|332796672|ref|YP_004458172.1|	-	0.16	11.1	5.2	0.16	11.1	3.0	1.5	1	1	0	1	1	1	0	Phosphoinositide-interacting	protein	family
Yip1	PF04893.12	gi|332796672|ref|YP_004458172.1|	-	0.23	10.9	7.0	0.38	10.2	4.9	1.4	1	1	0	1	1	1	0	Yip1	domain
DUF2207	PF09972.4	gi|332796672|ref|YP_004458172.1|	-	0.47	8.9	2.7	0.55	8.7	1.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF308	PF03729.8	gi|332796672|ref|YP_004458172.1|	-	0.5	10.3	14.0	0.082	12.9	6.5	1.9	1	1	1	2	2	2	0	Short	repeat	of	unknown	function	(DUF308)
DUF4282	PF14110.1	gi|332796672|ref|YP_004458172.1|	-	0.54	10.4	4.9	0.86	9.8	3.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
DUF3040	PF11239.3	gi|332796672|ref|YP_004458172.1|	-	0.78	9.8	5.5	1.3	9.1	3.5	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
Sigma_reg_N	PF13800.1	gi|332796672|ref|YP_004458172.1|	-	0.82	9.7	7.8	0.25	11.3	0.9	2.3	1	1	1	2	2	2	0	Sigma	factor	regulator	N-terminal
DUF2628	PF10947.3	gi|332796672|ref|YP_004458172.1|	-	1.2	8.9	6.7	0.73	9.6	3.5	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2628)
ATPase_gene1	PF09527.5	gi|332796672|ref|YP_004458172.1|	-	2.7	7.8	6.6	2.6	7.9	0.0	2.7	2	1	0	2	2	2	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
DUF929	PF06053.6	gi|332796673|ref|YP_004458173.1|	-	2.4e-50	170.9	6.0	4.5e-50	170.0	4.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
PQQ_2	PF13360.1	gi|332796673|ref|YP_004458173.1|	-	1.7e-28	99.7	1.7	2e-15	56.9	0.3	2.8	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|332796673|ref|YP_004458173.1|	-	9.3e-20	69.1	10.4	1.7e-06	27.2	0.1	6.3	6	0	0	6	6	6	4	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|332796673|ref|YP_004458173.1|	-	1.6e-15	56.7	18.2	0.00032	20.8	0.4	6.9	6	0	0	6	6	6	4	PQQ-like	domain
Gp58	PF07902.6	gi|332796674|ref|YP_004458174.1|	-	0.0013	17.0	0.0	0.0015	16.8	0.0	1.0	1	0	0	1	1	1	1	gp58-like	protein
Peptidase_M32	PF02074.10	gi|332796675|ref|YP_004458175.1|	-	3e-162	540.6	5.9	3.4e-162	540.5	4.1	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
4HB_MCP_1	PF12729.2	gi|332796675|ref|YP_004458175.1|	-	0.024	14.0	2.0	0.036	13.4	0.5	1.8	2	0	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
ACT_6	PF13740.1	gi|332796676|ref|YP_004458176.1|	-	7.9e-18	63.9	0.2	8.8e-18	63.7	0.1	1.0	1	0	0	1	1	1	1	ACT	domain
ACT	PF01842.20	gi|332796676|ref|YP_004458176.1|	-	1.4e-11	43.5	0.3	1.9e-11	43.2	0.2	1.1	1	0	0	1	1	1	1	ACT	domain
ACT_7	PF13840.1	gi|332796676|ref|YP_004458176.1|	-	3.5e-06	26.4	0.7	5.2e-06	25.8	0.5	1.3	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.1	gi|332796676|ref|YP_004458176.1|	-	4e-05	23.8	0.5	5.3e-05	23.4	0.3	1.3	1	1	0	1	1	1	1	ACT	domain
DUF2110	PF09883.4	gi|332796676|ref|YP_004458176.1|	-	0.13	11.8	1.0	0.39	10.2	0.1	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2110)
KH_5	PF13184.1	gi|332796676|ref|YP_004458176.1|	-	0.21	11.4	2.7	0.49	10.2	0.2	2.2	1	1	0	2	2	2	0	NusA-like	KH	domain
DUF711	PF05167.7	gi|332796677|ref|YP_004458177.1|	-	4.3e-129	430.7	2.9	5e-129	430.5	2.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
DUF4112	PF13430.1	gi|332796678|ref|YP_004458178.1|	-	0.64	9.9	3.4	0.94	9.4	2.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4112)
Glycos_transf_1	PF00534.15	gi|332796679|ref|YP_004458179.1|	-	1e-32	112.9	2.5	2.1e-32	111.9	0.1	2.3	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|332796679|ref|YP_004458179.1|	-	2.1e-18	66.6	0.9	2.7e-18	66.3	0.1	1.5	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.1	gi|332796679|ref|YP_004458179.1|	-	2.2e-11	44.0	0.0	6e-11	42.6	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|332796679|ref|YP_004458179.1|	-	1.4e-08	34.9	0.0	5.1e-08	33.0	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|332796679|ref|YP_004458179.1|	-	0.00052	20.1	0.0	0.00067	19.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Asp_Glu_race	PF01177.17	gi|332796680|ref|YP_004458180.1|	-	9.7e-12	45.2	0.0	1e-11	45.1	0.0	1.1	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
DUF3391	PF11871.3	gi|332796680|ref|YP_004458180.1|	-	0.042	14.0	0.0	0.079	13.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3391)
7kD_DNA_binding	PF02294.13	gi|332796682|ref|YP_004458182.1|	-	1.5e-39	133.4	5.0	1.7e-39	133.3	3.5	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Ribosomal_S5	PF00333.15	gi|332796682|ref|YP_004458182.1|	-	0.18	11.5	0.6	0.33	10.7	0.4	1.5	1	1	0	1	1	1	0	Ribosomal	protein	S5,	N-terminal	domain
DUF1641	PF07849.6	gi|332796683|ref|YP_004458183.1|	-	7.9e-14	50.9	1.0	2e-12	46.5	0.2	2.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1641)
Mating_N	PF12731.2	gi|332796683|ref|YP_004458183.1|	-	0.00034	20.4	1.0	0.015	15.1	0.0	2.5	1	1	1	2	2	2	1	Mating-type	protein	beta	1
SHOCT	PF09851.4	gi|332796683|ref|YP_004458183.1|	-	0.0047	16.3	0.6	1.2	8.7	0.2	2.8	2	0	0	2	2	2	2	Short	C-terminal	domain
MgtE_N	PF03448.12	gi|332796683|ref|YP_004458183.1|	-	0.025	14.8	0.4	2.2	8.6	0.0	2.9	2	1	1	3	3	3	0	MgtE	intracellular	N	domain
GMAP	PF06540.6	gi|332796683|ref|YP_004458183.1|	-	0.045	13.4	0.1	9.6	6.0	0.0	2.9	2	0	0	2	2	2	0	Galanin	message	associated	peptide	(GMAP)
EppA_BapA	PF07268.6	gi|332796683|ref|YP_004458183.1|	-	0.14	11.8	2.5	0.24	11.0	0.5	2.1	1	1	1	2	2	2	0	Exported	protein	precursor	(EppA/BapA)
Pyr_redox_2	PF07992.9	gi|332796684|ref|YP_004458184.1|	-	9.8e-14	51.6	0.0	1.8e-13	50.8	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|332796684|ref|YP_004458184.1|	-	3.5e-05	23.6	0.6	0.16	11.7	0.1	2.8	3	0	0	3	3	3	2	FAD-NAD(P)-binding
Trp_halogenase	PF04820.9	gi|332796684|ref|YP_004458184.1|	-	0.00047	18.8	0.2	0.0011	17.7	0.1	1.5	2	0	0	2	2	2	1	Tryptophan	halogenase
GIDA	PF01134.17	gi|332796684|ref|YP_004458184.1|	-	0.0014	17.6	2.0	0.0052	15.6	0.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|332796684|ref|YP_004458184.1|	-	0.044	12.6	0.5	1.5	7.6	0.1	2.5	2	1	1	3	3	3	0	FAD	dependent	oxidoreductase
TusA	PF01206.12	gi|332796685|ref|YP_004458185.1|	-	1.5e-11	43.6	0.0	1.7e-11	43.5	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF87	PF01935.12	gi|332796686|ref|YP_004458186.1|	-	5.1e-14	52.6	0.0	9.2e-14	51.8	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|332796686|ref|YP_004458186.1|	-	3.9e-13	49.5	0.2	9e-07	28.6	0.0	2.1	1	1	1	2	2	2	2	AAA-like	domain
AAA_17	PF13207.1	gi|332796686|ref|YP_004458186.1|	-	1.3e-05	25.9	0.3	2.6e-05	25.0	0.2	1.8	1	1	0	1	1	1	1	AAA	domain
Zot	PF05707.7	gi|332796686|ref|YP_004458186.1|	-	6.8e-05	22.4	0.2	0.00018	21.0	0.1	1.7	1	1	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_14	PF13173.1	gi|332796686|ref|YP_004458186.1|	-	0.00021	21.1	0.2	0.00089	19.1	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796686|ref|YP_004458186.1|	-	0.0027	18.0	0.0	0.0054	17.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|332796686|ref|YP_004458186.1|	-	0.0032	16.1	0.0	0.01	14.4	0.0	1.7	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|332796686|ref|YP_004458186.1|	-	0.004	16.6	0.1	0.38	10.1	0.1	2.2	1	1	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|332796686|ref|YP_004458186.1|	-	0.0064	16.6	0.1	0.13	12.4	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
DUF853	PF05872.7	gi|332796686|ref|YP_004458186.1|	-	0.0076	14.6	0.0	0.81	7.9	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
CbiA	PF01656.18	gi|332796686|ref|YP_004458186.1|	-	0.036	13.4	0.0	0.041	13.2	0.0	1.3	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MobB	PF03205.9	gi|332796686|ref|YP_004458186.1|	-	0.054	13.2	0.0	0.23	11.1	0.0	2.0	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PHTB1_N	PF14727.1	gi|332796687|ref|YP_004458187.1|	-	0.032	13.2	0.0	0.035	13.0	0.0	1.1	1	0	0	1	1	1	0	PTHB1	N-terminus
Grp1_Fun34_YaaH	PF01184.14	gi|332796688|ref|YP_004458188.1|	-	2.4e-49	167.5	24.4	2.9e-49	167.2	16.9	1.1	1	0	0	1	1	1	1	GPR1/FUN34/yaaH	family
Cytochrom_B_C	PF00032.12	gi|332796688|ref|YP_004458188.1|	-	0.043	14.0	7.4	0.078	13.2	5.0	1.6	1	1	0	1	1	1	0	Cytochrome	b(C-terminal)/b6/petD
AMP-binding	PF00501.23	gi|332796689|ref|YP_004458189.1|	-	3.7e-97	325.3	0.0	4.7e-97	325.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|332796689|ref|YP_004458189.1|	-	6.8e-20	71.8	0.5	2.7e-19	69.8	0.0	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
DUF2045	PF09741.4	gi|332796689|ref|YP_004458189.1|	-	0.084	11.9	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2045)
MFS_1	PF07690.11	gi|332796690|ref|YP_004458190.1|	-	2.8e-34	118.3	39.1	2.8e-34	118.3	27.1	1.4	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332796690|ref|YP_004458190.1|	-	2.5e-22	79.0	36.7	1.8e-17	63.1	9.0	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|332796690|ref|YP_004458190.1|	-	6.9e-05	21.4	28.8	0.0073	14.7	2.3	2.5	1	1	1	2	2	2	2	MFS/sugar	transport	protein
MFS_1	PF07690.11	gi|332796692|ref|YP_004458192.1|	-	6.1e-31	107.4	47.9	4.1e-19	68.5	16.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332796692|ref|YP_004458192.1|	-	2.3e-18	66.0	35.1	2.8e-15	55.8	10.5	2.2	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|332796692|ref|YP_004458192.1|	-	0.0047	16.6	8.5	0.79	9.5	0.0	3.3	3	0	0	3	3	3	2	MFS_1	like	family
MFS_2	PF13347.1	gi|332796692|ref|YP_004458192.1|	-	0.014	13.8	32.0	0.041	12.2	16.6	3.1	1	1	1	2	2	2	0	MFS/sugar	transport	protein
YbjM	PF11045.3	gi|332796692|ref|YP_004458192.1|	-	0.1	12.3	6.4	0.16	11.7	0.3	2.8	3	0	0	3	3	3	0	Putative	inner	membrane	protein	of	Enterobacteriaceae
DUF1056	PF06341.6	gi|332796692|ref|YP_004458192.1|	-	0.43	10.6	0.1	0.43	10.6	0.1	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1056)
Acetyltransf_7	PF13508.1	gi|332796693|ref|YP_004458193.1|	-	7.5e-09	35.6	0.0	1.1e-08	35.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|332796693|ref|YP_004458193.1|	-	0.00022	21.3	0.0	0.00029	20.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|332796693|ref|YP_004458193.1|	-	0.00049	20.0	0.1	0.001	19.0	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
DUF3922	PF13059.1	gi|332796693|ref|YP_004458193.1|	-	0.66	10.1	4.1	0.82	9.8	0.1	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3992)
MFS_1	PF07690.11	gi|332796694|ref|YP_004458194.1|	-	5.8e-31	107.4	49.7	5.8e-31	107.4	34.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
CRPA	PF05745.6	gi|332796694|ref|YP_004458194.1|	-	0.049	13.4	3.2	0.12	12.1	2.1	1.8	1	1	0	1	1	1	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
Pox_A14	PF05767.7	gi|332796695|ref|YP_004458195.1|	-	0.1	12.6	1.2	0.16	11.9	0.1	1.8	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
zf-ribbon_3	PF13248.1	gi|332796696|ref|YP_004458196.1|	-	4.3e-09	35.3	2.1	6.1e-09	34.8	1.4	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332796696|ref|YP_004458196.1|	-	1.2e-08	34.1	3.9	2e-08	33.4	2.7	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|332796696|ref|YP_004458196.1|	-	5.1e-07	29.3	0.8	7.1e-07	28.9	0.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-DHHC	PF01529.15	gi|332796696|ref|YP_004458196.1|	-	0.021	14.2	0.0	0.021	14.2	0.0	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
zf-RanBP	PF00641.13	gi|332796696|ref|YP_004458196.1|	-	0.042	12.9	0.4	0.06	12.4	0.3	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
DNA_RNApol_7kD	PF03604.8	gi|332796696|ref|YP_004458196.1|	-	0.1	12.0	1.4	1.1	8.7	0.0	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Nudix_N_2	PF14803.1	gi|332796696|ref|YP_004458196.1|	-	0.13	11.9	1.6	3.4	7.4	0.1	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
UPF0547	PF10571.4	gi|332796696|ref|YP_004458196.1|	-	4.6	7.0	7.3	2	8.1	0.6	2.2	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
Glycos_transf_1	PF00534.15	gi|332796697|ref|YP_004458197.1|	-	1.1e-18	67.1	0.2	8.4e-18	64.3	0.1	2.3	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|332796697|ref|YP_004458197.1|	-	3.3e-10	40.2	0.0	5.7e-10	39.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|332796697|ref|YP_004458197.1|	-	3.3e-06	27.2	0.0	6.9e-06	26.2	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
CarboxypepD_reg	PF13620.1	gi|332796701|ref|YP_004458201.1|	-	6.4e-09	35.7	10.4	2e-05	24.5	2.1	3.4	3	0	0	3	3	3	2	Carboxypeptidase	regulatory-like	domain
IncA	PF04156.9	gi|332796701|ref|YP_004458201.1|	-	2.6e-07	30.4	1.0	2.6e-07	30.4	0.7	2.9	3	0	0	3	3	2	1	IncA	protein
MG1	PF11974.3	gi|332796701|ref|YP_004458201.1|	-	1.4e-06	28.8	0.2	0.00026	21.4	0.0	3.4	2	1	0	2	2	2	1	Alpha-2-macroglobulin	MG1	domain
Reo_sigmaC	PF04582.7	gi|332796701|ref|YP_004458201.1|	-	1.5e-06	27.6	19.5	0.00011	21.5	8.5	2.2	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
CENP-F_leu_zip	PF10473.4	gi|332796701|ref|YP_004458201.1|	-	3.3e-06	27.0	10.4	0.00022	21.1	1.4	2.2	1	1	1	2	2	2	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Baculo_PEP_C	PF04513.7	gi|332796701|ref|YP_004458201.1|	-	5.5e-06	26.2	32.5	0.00031	20.5	15.0	2.6	1	1	2	3	3	3	3	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
AAA_13	PF13166.1	gi|332796701|ref|YP_004458201.1|	-	2.2e-05	23.1	5.7	3e-05	22.7	4.0	1.1	1	0	0	1	1	1	1	AAA	domain
Spc7	PF08317.6	gi|332796701|ref|YP_004458201.1|	-	2.3e-05	23.2	9.7	0.0025	16.5	2.3	2.1	1	1	1	2	2	2	2	Spc7	kinetochore	protein
Prefoldin_2	PF01920.15	gi|332796701|ref|YP_004458201.1|	-	3e-05	23.7	4.3	0.25	11.1	0.1	3.1	1	1	2	3	3	3	2	Prefoldin	subunit
SlyX	PF04102.7	gi|332796701|ref|YP_004458201.1|	-	4.5e-05	23.7	8.4	0.0076	16.6	0.5	3.1	2	1	0	2	2	2	1	SlyX
Seryl_tRNA_N	PF02403.17	gi|332796701|ref|YP_004458201.1|	-	7.8e-05	22.6	4.0	0.02	14.9	0.2	2.2	1	1	1	2	2	2	2	Seryl-tRNA	synthetase	N-terminal	domain
Lzipper-MIP1	PF14389.1	gi|332796701|ref|YP_004458201.1|	-	9.2e-05	22.4	7.7	0.091	12.8	0.3	2.7	2	1	0	2	2	2	2	Leucine-zipper	of	ternary	complex	factor	MIP1
DUF4618	PF15397.1	gi|332796701|ref|YP_004458201.1|	-	9.8e-05	21.8	9.5	0.012	14.9	1.4	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4618)
TBPIP	PF07106.8	gi|332796701|ref|YP_004458201.1|	-	0.00014	21.4	12.1	0.00079	19.0	2.9	2.4	1	1	1	2	2	2	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
TMF_TATA_bd	PF12325.3	gi|332796701|ref|YP_004458201.1|	-	0.00015	21.5	11.2	0.033	13.9	2.4	2.6	1	1	2	3	3	3	3	TATA	element	modulatory	factor	1	TATA	binding
Cluap1	PF10234.4	gi|332796701|ref|YP_004458201.1|	-	0.00018	20.8	6.1	0.0049	16.0	0.9	2.1	1	1	1	2	2	2	1	Clusterin-associated	protein-1
DUF3584	PF12128.3	gi|332796701|ref|YP_004458201.1|	-	0.00026	18.5	2.7	0.00035	18.0	1.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
TMF_DNA_bd	PF12329.3	gi|332796701|ref|YP_004458201.1|	-	0.00038	20.2	16.7	0.012	15.4	1.7	3.0	1	1	2	3	3	3	1	TATA	element	modulatory	factor	1	DNA	binding
Bacillus_HBL	PF05791.6	gi|332796701|ref|YP_004458201.1|	-	0.00047	19.5	10.3	0.0057	16.0	1.7	2.2	1	1	1	2	2	2	2	Bacillus	haemolytic	enterotoxin	(HBL)
Myosin_tail_1	PF01576.14	gi|332796701|ref|YP_004458201.1|	-	0.00059	17.7	1.6	0.00082	17.2	1.1	1.1	1	0	0	1	1	1	1	Myosin	tail
DivIC	PF04977.10	gi|332796701|ref|YP_004458201.1|	-	0.00061	19.2	1.9	0.52	9.8	0.1	3.2	2	1	1	3	3	3	1	Septum	formation	initiator
FlaC_arch	PF05377.6	gi|332796701|ref|YP_004458201.1|	-	0.00061	19.6	16.8	0.022	14.6	1.3	3.6	1	1	3	4	4	4	1	Flagella	accessory	protein	C	(FlaC)
bZIP_1	PF00170.16	gi|332796701|ref|YP_004458201.1|	-	0.00065	19.6	11.0	0.28	11.1	0.7	3.2	2	1	1	3	3	3	2	bZIP	transcription	factor
ADIP	PF11559.3	gi|332796701|ref|YP_004458201.1|	-	0.00065	19.6	13.5	0.026	14.4	2.3	2.7	1	1	0	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
WEMBL	PF05701.6	gi|332796701|ref|YP_004458201.1|	-	0.0011	17.5	7.6	0.0014	17.1	5.3	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
TrbL	PF04610.9	gi|332796701|ref|YP_004458201.1|	-	0.0012	18.5	3.5	0.0012	18.5	2.4	1.9	2	0	0	2	2	1	1	TrbL/VirB6	plasmid	conjugal	transfer	protein
HALZ	PF02183.13	gi|332796701|ref|YP_004458201.1|	-	0.002	17.8	4.7	0.6	9.8	0.0	3.0	2	1	2	4	4	3	2	Homeobox	associated	leucine	zipper
Lectin_N	PF03954.9	gi|332796701|ref|YP_004458201.1|	-	0.0023	17.3	4.5	0.0023	17.3	3.1	2.2	1	1	1	2	2	2	1	Hepatic	lectin,	N-terminal	domain
TPR_MLP1_2	PF07926.7	gi|332796701|ref|YP_004458201.1|	-	0.0023	17.6	7.8	0.076	12.7	1.1	2.1	1	1	1	2	2	2	2	TPR/MLP1/MLP2-like	protein
DUF4480	PF13715.1	gi|332796701|ref|YP_004458201.1|	-	0.0028	17.6	5.1	0.022	14.7	0.2	3.2	3	0	0	3	3	2	1	Domain	of	unknown	function	(DUF4480)
BRE1	PF08647.6	gi|332796701|ref|YP_004458201.1|	-	0.003	17.4	4.0	0.06	13.3	0.1	2.5	2	1	0	2	2	2	1	BRE1	E3	ubiquitin	ligase
DUF641	PF04859.7	gi|332796701|ref|YP_004458201.1|	-	0.0031	17.2	2.4	1	9.1	0.3	2.5	1	1	0	2	2	2	1	Plant	protein	of	unknown	function	(DUF641)
ATG16	PF08614.6	gi|332796701|ref|YP_004458201.1|	-	0.0032	17.3	11.9	0.021	14.6	2.4	2.2	1	1	1	2	2	2	2	Autophagy	protein	16	(ATG16)
bZIP_2	PF07716.10	gi|332796701|ref|YP_004458201.1|	-	0.0034	17.1	2.9	1.4	8.8	0.6	2.9	2	1	1	3	3	2	0	Basic	region	leucine	zipper
Filament	PF00038.16	gi|332796701|ref|YP_004458201.1|	-	0.0039	16.6	8.0	0.19	11.1	1.7	2.1	1	1	1	2	2	2	2	Intermediate	filament	protein
DUF3450	PF11932.3	gi|332796701|ref|YP_004458201.1|	-	0.0059	15.9	7.9	0.065	12.4	0.8	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3450)
DUF1664	PF07889.7	gi|332796701|ref|YP_004458201.1|	-	0.0065	16.2	5.4	0.063	13.0	0.6	2.7	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF1664)
DUF2968	PF11180.3	gi|332796701|ref|YP_004458201.1|	-	0.0071	15.7	0.6	0.082	12.2	0.0	2.6	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2968)
Tektin	PF03148.9	gi|332796701|ref|YP_004458201.1|	-	0.011	14.2	9.0	0.058	11.9	0.5	2.5	1	1	2	3	3	3	0	Tektin	family
PspA_IM30	PF04012.7	gi|332796701|ref|YP_004458201.1|	-	0.012	15.0	1.8	3.6	6.8	0.0	2.5	1	1	2	3	3	3	0	PspA/IM30	family
Spc24	PF08286.6	gi|332796701|ref|YP_004458201.1|	-	0.012	15.2	15.5	0.46	10.2	2.1	3.2	1	1	2	3	3	3	0	Spc24	subunit	of	Ndc80
NPV_P10	PF05531.7	gi|332796701|ref|YP_004458201.1|	-	0.013	15.7	13.6	2.5	8.3	5.2	3.2	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
AIP3	PF03915.8	gi|332796701|ref|YP_004458201.1|	-	0.017	14.0	4.1	0.023	13.6	2.8	1.1	1	0	0	1	1	1	0	Actin	interacting	protein	3
YlqD	PF11068.3	gi|332796701|ref|YP_004458201.1|	-	0.024	14.6	1.4	0.51	10.3	0.2	2.1	1	1	1	2	2	2	0	YlqD	protein
LPP	PF04728.8	gi|332796701|ref|YP_004458201.1|	-	0.026	14.3	9.2	0.55	10.0	1.0	3.8	2	1	1	3	3	3	0	Lipoprotein	leucine-zipper
Tropomyosin_1	PF12718.2	gi|332796701|ref|YP_004458201.1|	-	0.027	14.3	8.6	0.32	10.8	1.4	2.2	1	1	1	2	2	2	0	Tropomyosin	like
Mnd1	PF03962.10	gi|332796701|ref|YP_004458201.1|	-	0.029	14.0	1.8	0.12	12.0	1.2	1.8	1	1	0	1	1	1	0	Mnd1	family
IFT57	PF10498.4	gi|332796701|ref|YP_004458201.1|	-	0.034	12.8	8.7	0.06	12.0	5.9	1.4	1	1	0	1	1	1	0	Intra-flagellar	transport	protein	57
Atg14	PF10186.4	gi|332796701|ref|YP_004458201.1|	-	0.04	12.8	1.3	1.1	8.0	0.2	1.9	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
MAD	PF05557.8	gi|332796701|ref|YP_004458201.1|	-	0.042	11.9	11.2	0.22	9.5	1.2	2.0	1	1	1	2	2	2	0	Mitotic	checkpoint	protein
BicD	PF09730.4	gi|332796701|ref|YP_004458201.1|	-	0.047	12.0	5.8	0.068	11.5	4.0	1.1	1	0	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
DUF1640	PF07798.6	gi|332796701|ref|YP_004458201.1|	-	0.056	13.4	7.8	0.41	10.6	5.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1640)
Uso1_p115_C	PF04871.8	gi|332796701|ref|YP_004458201.1|	-	0.065	13.1	3.0	0.15	11.9	0.2	2.1	2	0	0	2	2	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Rootletin	PF15035.1	gi|332796701|ref|YP_004458201.1|	-	0.071	13.0	2.1	0.13	12.1	1.4	1.3	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
DUF869	PF05911.6	gi|332796701|ref|YP_004458201.1|	-	0.075	11.2	7.9	0.063	11.5	3.0	1.8	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF869)
Phage_GP20	PF06810.6	gi|332796701|ref|YP_004458201.1|	-	0.089	12.2	2.6	1	8.7	0.3	2.1	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
APG6	PF04111.7	gi|332796701|ref|YP_004458201.1|	-	0.093	11.7	6.6	4.8	6.1	5.1	2.0	1	1	0	1	1	1	0	Autophagy	protein	Apg6
Big_3	PF07523.7	gi|332796701|ref|YP_004458201.1|	-	0.11	12.5	2.2	1.7	8.7	0.0	2.9	2	1	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
Uds1	PF15456.1	gi|332796701|ref|YP_004458201.1|	-	0.11	12.4	3.8	1.7	8.6	0.1	2.6	1	1	1	2	2	2	0	Up-regulated	During	Septation
MbeD_MobD	PF04899.7	gi|332796701|ref|YP_004458201.1|	-	0.12	12.2	3.9	0.55	10.1	0.4	3.0	1	1	2	3	3	3	0	MbeD/MobD	like
Lebercilin	PF15619.1	gi|332796701|ref|YP_004458201.1|	-	0.14	11.5	3.9	0.55	9.6	2.7	1.8	1	1	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
AAA_27	PF13514.1	gi|332796701|ref|YP_004458201.1|	-	0.16	9.6	4.3	0.27	8.8	3.0	1.2	1	1	0	1	1	1	0	AAA	domain
DUF812	PF05667.6	gi|332796701|ref|YP_004458201.1|	-	0.18	10.2	9.1	2	6.8	6.3	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
SF-assemblin	PF06705.6	gi|332796701|ref|YP_004458201.1|	-	0.2	10.7	9.1	1.7	7.7	1.3	2.2	1	1	1	2	2	2	0	SF-assemblin/beta	giardin
Cob_adeno_trans	PF01923.13	gi|332796701|ref|YP_004458201.1|	-	0.23	11.2	1.8	2.4	7.9	0.1	1.9	1	1	1	2	2	2	0	Cobalamin	adenosyltransferase
Not3	PF04065.10	gi|332796701|ref|YP_004458201.1|	-	0.26	10.5	4.9	1.4	8.1	0.5	2.2	1	1	1	2	2	2	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
WXG100	PF06013.7	gi|332796701|ref|YP_004458201.1|	-	0.27	11.2	1.8	32	4.6	0.1	3.4	2	1	0	4	4	3	0	Proteins	of	100	residues	with	WXG
End3	PF12761.2	gi|332796701|ref|YP_004458201.1|	-	0.3	10.7	5.4	0.6	9.7	3.7	1.4	1	1	0	1	1	1	0	Actin	cytoskeleton-regulatory	complex	protein	END3
DUF16	PF01519.11	gi|332796701|ref|YP_004458201.1|	-	0.31	11.2	2.5	5.5	7.2	0.3	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
DUF2353	PF09789.4	gi|332796701|ref|YP_004458201.1|	-	0.32	10.1	5.7	0.73	9.0	4.0	1.5	1	1	0	1	1	1	0	Uncharacterized	coiled-coil	protein	(DUF2353)
DUF3373	PF11853.3	gi|332796701|ref|YP_004458201.1|	-	0.34	9.3	3.9	0.41	9.1	0.6	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3373)
Prefoldin	PF02996.12	gi|332796701|ref|YP_004458201.1|	-	0.38	10.4	8.5	20	4.8	0.1	3.2	1	1	1	3	3	3	0	Prefoldin	subunit
COG5	PF10392.4	gi|332796701|ref|YP_004458201.1|	-	0.38	10.7	12.1	1.4	8.8	3.1	2.6	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
CCDC155	PF14662.1	gi|332796701|ref|YP_004458201.1|	-	0.38	10.3	7.6	3.3	7.2	5.3	2.0	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
COG2	PF06148.6	gi|332796701|ref|YP_004458201.1|	-	0.41	10.5	10.6	1.6	8.5	2.4	2.3	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
CALCOCO1	PF07888.6	gi|332796701|ref|YP_004458201.1|	-	0.43	8.7	4.7	1.2	7.2	3.2	1.7	1	1	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
Cep57_MT_bd	PF06657.8	gi|332796701|ref|YP_004458201.1|	-	0.45	10.5	4.5	5.6	6.9	0.1	2.9	1	1	2	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
Striatin	PF08232.7	gi|332796701|ref|YP_004458201.1|	-	0.46	10.8	5.0	28	5.0	3.5	2.3	1	1	0	1	1	1	0	Striatin	family
MscS_porin	PF12795.2	gi|332796701|ref|YP_004458201.1|	-	0.49	9.6	13.1	2.1	7.5	9.1	1.8	1	1	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
DUF2730	PF10805.3	gi|332796701|ref|YP_004458201.1|	-	0.53	10.0	8.7	4.3	7.1	0.3	3.4	2	1	2	4	4	3	0	Protein	of	unknown	function	(DUF2730)
Ax_dynein_light	PF10211.4	gi|332796701|ref|YP_004458201.1|	-	0.54	10.0	3.1	8.5	6.1	0.4	2.4	1	1	2	3	3	3	0	Axonemal	dynein	light	chain
Fib_alpha	PF08702.5	gi|332796701|ref|YP_004458201.1|	-	0.56	10.3	12.5	2	8.5	0.3	2.5	1	1	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DUF972	PF06156.8	gi|332796701|ref|YP_004458201.1|	-	0.6	10.4	12.1	3.5	8.0	3.0	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Syntaxin	PF00804.20	gi|332796701|ref|YP_004458201.1|	-	0.74	10.0	7.7	0.7	10.0	3.3	2.0	1	1	1	2	2	2	0	Syntaxin
FlxA	PF14282.1	gi|332796701|ref|YP_004458201.1|	-	0.77	9.7	11.6	0.72	9.8	2.0	2.8	1	1	0	2	2	2	0	FlxA-like	protein
HsbA	PF12296.3	gi|332796701|ref|YP_004458201.1|	-	0.8	9.5	11.3	3.6	7.4	2.3	3.3	2	1	1	3	3	3	0	Hydrophobic	surface	binding	protein	A
BCAS2	PF05700.6	gi|332796701|ref|YP_004458201.1|	-	0.87	9.0	9.6	0.78	9.1	3.0	1.9	1	1	1	2	2	2	0	Breast	carcinoma	amplified	sequence	2	(BCAS2)
EMP24_GP25L	PF01105.19	gi|332796701|ref|YP_004458201.1|	-	0.9	9.2	10.4	6.7	6.3	3.5	3.3	2	1	1	3	3	2	0	emp24/gp25L/p24	family/GOLD
Lge1	PF11488.3	gi|332796701|ref|YP_004458201.1|	-	0.9	9.7	7.2	1.6	8.9	1.6	2.3	2	0	0	2	2	2	0	Transcriptional	regulatory	protein	LGE1
CorA	PF01544.13	gi|332796701|ref|YP_004458201.1|	-	0.91	8.4	15.9	0.56	9.1	9.8	1.5	1	1	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
CCDC144C	PF14915.1	gi|332796701|ref|YP_004458201.1|	-	0.99	8.2	10.6	1.9	7.3	7.2	1.4	1	1	0	1	1	1	0	CCDC144C	protein	coiled-coil	region
Med4	PF10018.4	gi|332796701|ref|YP_004458201.1|	-	1	8.6	7.7	0.77	9.1	1.1	2.4	1	1	2	3	3	3	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
CENP-Q	PF13094.1	gi|332796701|ref|YP_004458201.1|	-	1.1	9.3	10.5	33	4.4	7.3	2.1	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF904	PF06005.7	gi|332796701|ref|YP_004458201.1|	-	1.1	9.6	12.1	2.6e+03	-1.2	8.4	2.8	1	1	0	1	1	0	0	Protein	of	unknown	function	(DUF904)
Fez1	PF06818.10	gi|332796701|ref|YP_004458201.1|	-	1.2	9.0	3.4	8	6.4	2.4	2.0	1	1	0	1	1	1	0	Fez1
Macoilin	PF09726.4	gi|332796701|ref|YP_004458201.1|	-	1.2	7.2	7.6	0.79	7.9	1.4	1.9	1	1	1	2	2	2	0	Transmembrane	protein
DivIVA	PF05103.8	gi|332796701|ref|YP_004458201.1|	-	1.4	8.9	8.7	9.9	6.2	0.3	2.8	1	1	2	3	3	3	0	DivIVA	protein
DUF603	PF04645.7	gi|332796701|ref|YP_004458201.1|	-	1.6	8.6	13.8	4.1	7.3	0.3	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function,	DUF603
HR1	PF02185.11	gi|332796701|ref|YP_004458201.1|	-	1.6	8.4	7.7	7.1	6.4	0.2	3.1	2	1	1	3	3	3	0	Hr1	repeat
Kinetocho_Slk19	PF12709.2	gi|332796701|ref|YP_004458201.1|	-	1.9	8.6	5.3	39	4.3	0.4	3.2	1	1	2	3	3	3	0	Central	kinetochore-associated
Cortex-I_coil	PF09304.5	gi|332796701|ref|YP_004458201.1|	-	2	8.4	4.9	15	5.6	0.4	2.1	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
DUF4201	PF13870.1	gi|332796701|ref|YP_004458201.1|	-	2.1	7.7	8.2	68	2.8	5.7	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
Snapin_Pallidin	PF14712.1	gi|332796701|ref|YP_004458201.1|	-	2.3	8.5	9.4	3.7	7.9	0.9	2.6	1	1	2	3	3	3	0	Snapin/Pallidin
BLOC1_2	PF10046.4	gi|332796701|ref|YP_004458201.1|	-	2.3	8.3	15.8	3.7	7.7	4.0	2.4	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
HAUS5	PF14817.1	gi|332796701|ref|YP_004458201.1|	-	2.4	6.5	6.5	7.8	4.9	0.5	1.9	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	5
Fmp27_WPPW	PF10359.4	gi|332796701|ref|YP_004458201.1|	-	2.6	6.3	6.4	7.2	4.9	4.4	1.6	1	1	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
Mod_r	PF07200.8	gi|332796701|ref|YP_004458201.1|	-	2.8	7.8	6.7	14	5.5	0.9	2.1	1	1	1	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
Laminin_II	PF06009.7	gi|332796701|ref|YP_004458201.1|	-	3	7.5	13.4	4.9	6.8	3.9	2.3	1	1	1	2	2	2	0	Laminin	Domain	II
DUF4064	PF13273.1	gi|332796701|ref|YP_004458201.1|	-	3.9	7.6	11.4	0.14	12.2	2.9	2.5	2	1	0	2	2	1	0	Protein	of	unknown	function	(DUF4064)
RmuC	PF02646.11	gi|332796701|ref|YP_004458201.1|	-	4	6.1	11.0	0.77	8.5	2.5	2.1	1	1	0	2	2	2	0	RmuC	family
XhlA	PF10779.4	gi|332796701|ref|YP_004458201.1|	-	4.1	7.3	12.0	6.6	6.7	2.6	3.1	1	1	1	2	2	2	0	Haemolysin	XhlA
Vps51	PF08700.6	gi|332796701|ref|YP_004458201.1|	-	4.4	7.2	9.1	18	5.2	0.2	3.5	2	2	2	4	4	4	0	Vps51/Vps67
H-kinase_dim	PF02895.9	gi|332796701|ref|YP_004458201.1|	-	4.4	7.7	8.1	2.5	8.5	2.2	2.2	2	0	0	2	2	2	0	Signal	transducing	histidine	kinase,	homodimeric	domain
NTR2	PF15458.1	gi|332796701|ref|YP_004458201.1|	-	6	6.0	6.3	2.1	7.4	0.5	2.1	1	1	0	2	2	2	0	Nineteen	complex-related	protein	2
DASH_Dam1	PF08653.5	gi|332796701|ref|YP_004458201.1|	-	6.4	6.6	6.9	3.1	7.6	0.3	2.9	3	0	0	3	3	3	0	DASH	complex	subunit	Dam1
DASH_Dad3	PF08656.5	gi|332796701|ref|YP_004458201.1|	-	9.2	6.0	15.8	24	4.7	0.4	3.5	2	1	0	2	2	2	0	DASH	complex	subunit	Dad3
Ion_trans_2	PF07885.11	gi|332796702|ref|YP_004458202.1|	-	8e-18	63.9	8.6	1.5e-17	63.0	6.0	1.4	1	0	0	1	1	1	1	Ion	channel
TrkA_N	PF02254.13	gi|332796702|ref|YP_004458202.1|	-	3e-12	46.5	0.8	5.4e-12	45.7	0.5	1.5	1	0	0	1	1	1	1	TrkA-N	domain
Ion_trans	PF00520.26	gi|332796702|ref|YP_004458202.1|	-	7.7e-05	22.0	5.9	0.00025	20.3	3.8	1.9	2	0	0	2	2	2	1	Ion	transport	protein
Shikimate_DH	PF01488.15	gi|332796702|ref|YP_004458202.1|	-	0.0075	16.3	2.3	0.031	14.3	1.6	2.0	1	1	1	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
GARS_N	PF02844.10	gi|332796702|ref|YP_004458202.1|	-	0.028	14.8	0.2	0.64	10.5	0.0	2.2	1	1	0	2	2	2	0	Phosphoribosylglycinamide	synthetase,	N	domain
Synaptonemal_3	PF15191.1	gi|332796702|ref|YP_004458202.1|	-	0.048	13.4	1.5	0.4	10.4	0.1	2.6	2	0	0	2	2	2	0	Synaptonemal	complex	central	element	protein	3
NAD_binding_7	PF13241.1	gi|332796702|ref|YP_004458202.1|	-	0.061	13.5	0.2	0.17	12.1	0.2	1.8	1	1	0	1	1	1	0	Putative	NAD(P)-binding
DUF1049	PF06305.6	gi|332796702|ref|YP_004458202.1|	-	0.081	12.4	0.0	0.081	12.4	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF3149	PF11346.3	gi|332796702|ref|YP_004458202.1|	-	0.17	11.4	2.9	0.57	9.7	2.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3149)
ABC2_membrane	PF01061.19	gi|332796703|ref|YP_004458203.1|	-	3e-24	85.3	21.9	3e-24	85.3	15.2	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|332796703|ref|YP_004458203.1|	-	9.2e-17	61.0	24.9	9.2e-17	61.0	17.3	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|332796703|ref|YP_004458203.1|	-	1.9e-09	37.0	28.4	2.4e-09	36.6	19.7	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|332796703|ref|YP_004458203.1|	-	1.5e-06	27.3	17.3	2.1e-06	26.8	12.0	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
CcmB	PF03379.8	gi|332796703|ref|YP_004458203.1|	-	0.06	12.5	8.8	0.05	12.8	4.9	1.8	2	0	0	2	2	2	0	CcmB	protein
Sulfate_tra_GLY	PF13792.1	gi|332796703|ref|YP_004458203.1|	-	1.9	8.2	10.7	0.06	13.0	2.3	2.3	3	0	0	3	3	3	0	Sulfate	transporter	N-terminal	domain	with	GLY	motif
ABC_tran	PF00005.22	gi|332796704|ref|YP_004458204.1|	-	4.5e-30	104.7	0.1	1.1e-29	103.4	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|332796704|ref|YP_004458204.1|	-	5.8e-13	49.4	6.0	6.8e-12	45.9	0.8	2.8	2	1	0	2	2	2	1	AAA	domain
DUF4162	PF13732.1	gi|332796704|ref|YP_004458204.1|	-	2.5e-06	27.8	2.6	1.2e-05	25.7	0.7	2.4	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4162)
AAA_15	PF13175.1	gi|332796704|ref|YP_004458204.1|	-	9e-05	21.6	5.5	0.00045	19.3	0.1	2.6	2	1	0	3	3	3	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|332796704|ref|YP_004458204.1|	-	0.0016	17.7	0.0	0.3	10.3	0.0	2.3	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|332796704|ref|YP_004458204.1|	-	0.0084	16.2	0.4	0.028	14.5	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|332796704|ref|YP_004458204.1|	-	0.024	14.1	0.0	0.049	13.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MutS_V	PF00488.16	gi|332796704|ref|YP_004458204.1|	-	0.043	13.2	0.0	2.7	7.3	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
SbcCD_C	PF13558.1	gi|332796704|ref|YP_004458204.1|	-	0.047	13.6	0.0	0.096	12.6	0.0	1.6	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA	PF00004.24	gi|332796704|ref|YP_004458204.1|	-	0.053	13.7	3.4	1.1	9.5	2.3	2.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|332796704|ref|YP_004458204.1|	-	0.073	12.2	0.0	0.16	11.1	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_23	PF13476.1	gi|332796704|ref|YP_004458204.1|	-	0.18	12.1	11.0	6.6	6.9	7.6	2.6	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|332796704|ref|YP_004458204.1|	-	0.19	11.1	1.6	0.55	9.6	0.3	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
PALP	PF00291.20	gi|332796706|ref|YP_004458206.1|	-	6.8e-33	114.2	0.0	8.6e-33	113.8	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Transcrip_reg	PF01709.15	gi|332796707|ref|YP_004458207.1|	-	0.099	11.7	0.0	0.11	11.6	0.0	1.0	1	0	0	1	1	1	0	Transcriptional	regulator
Asp_protease_2	PF13650.1	gi|332796708|ref|YP_004458208.1|	-	0.075	13.5	0.0	0.09	13.2	0.0	1.4	1	1	0	1	1	1	0	Aspartyl	protease
RVP	PF00077.15	gi|332796708|ref|YP_004458208.1|	-	0.082	12.8	0.0	0.16	11.8	0.0	1.7	1	1	0	1	1	1	0	Retroviral	aspartyl	protease
PQQ_2	PF13360.1	gi|332796710|ref|YP_004458210.1|	-	2.5e-35	122.0	0.0	1.6e-14	53.9	0.0	2.8	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|332796710|ref|YP_004458210.1|	-	1.2e-29	100.3	8.6	1.5e-05	24.3	0.0	7.3	7	0	0	7	7	7	6	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|332796710|ref|YP_004458210.1|	-	4.4e-17	61.7	0.0	0.0011	19.2	0.0	7.0	7	1	0	7	7	7	4	PQQ-like	domain
Alpha-amylase	PF00128.19	gi|332796711|ref|YP_004458211.1|	-	3.6e-33	115.3	0.8	1.8e-30	106.4	0.2	3.1	2	1	0	2	2	2	2	Alpha	amylase,	catalytic	domain
Alpha-amylase	PF00128.19	gi|332796712|ref|YP_004458212.1|	-	2e-19	70.1	0.0	5.2e-18	65.4	0.0	2.3	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|332796712|ref|YP_004458212.1|	-	7e-16	58.0	0.0	1.4e-15	57.1	0.0	1.5	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase	PF00128.19	gi|332796713|ref|YP_004458213.1|	-	2.2e-36	125.8	0.2	3.8e-25	88.9	0.0	3.1	1	1	1	2	2	2	2	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|332796713|ref|YP_004458213.1|	-	1.9e-10	40.6	0.0	4.1e-10	39.5	0.0	1.5	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amyl_C	PF09071.5	gi|332796713|ref|YP_004458213.1|	-	0.0013	18.4	0.1	0.0044	16.7	0.0	2.0	2	0	0	2	2	2	1	Alpha-amylase,	C	terminal
hDGE_amylase	PF14701.1	gi|332796713|ref|YP_004458213.1|	-	0.045	12.6	0.0	0.86	8.4	0.0	2.1	2	0	0	2	2	2	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
Lysine_decarbox	PF03641.9	gi|332796715|ref|YP_004458215.1|	-	0.00034	20.4	0.0	0.00066	19.5	0.0	1.6	1	1	1	2	2	2	1	Possible	lysine	decarboxylase
Peptidase_M48	PF01435.13	gi|332796716|ref|YP_004458216.1|	-	2.2e-19	69.9	0.0	5.4e-19	68.6	0.0	1.5	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|332796716|ref|YP_004458216.1|	-	0.00041	19.4	3.9	0.00071	18.6	2.6	1.7	1	1	0	1	1	1	1	BlaR1	peptidase	M56
Tic20	PF09685.5	gi|332796716|ref|YP_004458216.1|	-	0.85	9.6	12.2	4.2	7.4	0.4	2.3	2	0	0	2	2	2	0	Tic20-like	protein
TB2_DP1_HVA22	PF03134.14	gi|332796716|ref|YP_004458216.1|	-	8.5	6.1	20.0	0.081	12.6	6.7	2.2	2	0	0	2	2	2	0	TB2/DP1,	HVA22	family
Pyridox_oxase_2	PF12766.2	gi|332796717|ref|YP_004458217.1|	-	0.12	12.6	0.0	0.15	12.3	0.0	1.1	1	0	0	1	1	1	0	Pyridoxamine	5'-phosphate	oxidase
Pro_racemase	PF05544.6	gi|332796718|ref|YP_004458218.1|	-	0.03	13.1	0.1	0.04	12.7	0.1	1.1	1	0	0	1	1	1	0	Proline	racemase
CbiQ	PF02361.11	gi|332796719|ref|YP_004458219.1|	-	1.2e-10	41.3	14.7	1.2e-10	41.3	10.2	2.1	2	1	0	2	2	2	1	Cobalt	transport	protein
MFS_1	PF07690.11	gi|332796720|ref|YP_004458220.1|	-	3.3e-41	141.1	80.6	6.6e-37	127.0	34.4	3.3	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332796720|ref|YP_004458220.1|	-	3.5e-08	32.0	5.6	8.8e-08	30.7	3.9	1.6	1	0	0	1	1	1	1	Transmembrane	secretion	effector
Sugar_tr	PF00083.19	gi|332796720|ref|YP_004458220.1|	-	1.3e-07	30.5	32.4	0.00011	20.9	12.8	2.7	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
PUCC	PF03209.10	gi|332796720|ref|YP_004458220.1|	-	0.00058	18.6	4.5	0.00058	18.6	3.1	2.6	2	1	0	2	2	2	1	PUCC	protein
DUF2583	PF10762.4	gi|332796720|ref|YP_004458220.1|	-	0.0045	17.1	3.0	0.48	10.6	0.2	3.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2583)
Phage_holin_5	PF06946.6	gi|332796720|ref|YP_004458220.1|	-	7.2	6.8	8.9	2.8	8.1	2.4	3.0	2	1	1	3	3	3	0	Phage	holin
MarR	PF01047.17	gi|332796721|ref|YP_004458221.1|	-	1.4e-13	50.2	0.0	3e-13	49.2	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|332796721|ref|YP_004458221.1|	-	8e-11	42.1	0.1	1.3e-10	41.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|332796721|ref|YP_004458221.1|	-	2.5e-09	36.6	0.0	3.9e-09	36.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|332796721|ref|YP_004458221.1|	-	3e-06	26.8	0.3	5.7e-06	25.9	0.2	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|332796721|ref|YP_004458221.1|	-	1.4e-05	25.0	0.1	2.7e-05	24.1	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|332796721|ref|YP_004458221.1|	-	5.9e-05	22.7	0.0	0.00013	21.6	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|332796721|ref|YP_004458221.1|	-	8.7e-05	22.0	0.0	0.00018	21.0	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_45	PF14947.1	gi|332796721|ref|YP_004458221.1|	-	0.00025	20.7	0.4	0.00049	19.8	0.2	1.6	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_5	PF01022.15	gi|332796721|ref|YP_004458221.1|	-	0.00039	20.0	0.0	0.00075	19.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
PadR	PF03551.9	gi|332796721|ref|YP_004458221.1|	-	0.00067	19.3	0.0	0.0017	18.0	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_24	PF13412.1	gi|332796721|ref|YP_004458221.1|	-	0.0008	18.7	0.0	0.0037	16.6	0.0	2.2	1	1	1	2	2	2	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|332796721|ref|YP_004458221.1|	-	0.0032	16.8	0.0	0.0071	15.7	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
DUF2513	PF10711.4	gi|332796721|ref|YP_004458221.1|	-	0.0054	16.7	0.2	0.023	14.7	0.0	1.9	1	1	1	2	2	2	1	Hypothetical	protein	(DUF2513)
Rrf2	PF02082.15	gi|332796721|ref|YP_004458221.1|	-	0.0075	16.3	0.0	0.014	15.4	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
Fe_dep_repress	PF01325.14	gi|332796721|ref|YP_004458221.1|	-	0.012	15.5	0.0	0.025	14.5	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HxlR	PF01638.12	gi|332796721|ref|YP_004458221.1|	-	0.015	14.9	0.2	0.026	14.1	0.1	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_CodY	PF08222.6	gi|332796721|ref|YP_004458221.1|	-	0.019	14.2	0.2	0.033	13.5	0.1	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
Ftsk_gamma	PF09397.5	gi|332796721|ref|YP_004458221.1|	-	0.029	14.0	0.1	0.077	12.7	0.0	1.7	1	0	0	1	1	1	0	Ftsk	gamma	domain
Phage_int_SAM_5	PF13102.1	gi|332796721|ref|YP_004458221.1|	-	0.054	13.4	0.5	0.09	12.7	0.2	1.4	1	1	0	1	1	1	0	Phage	integrase	SAM-like	domain
DUF4423	PF14394.1	gi|332796721|ref|YP_004458221.1|	-	0.055	13.0	0.1	0.11	12.0	0.0	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DUF3116	PF11313.3	gi|332796721|ref|YP_004458221.1|	-	0.061	12.9	1.1	0.14	11.7	0.1	2.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3116)
Sulfolobus_pRN	PF05584.6	gi|332796721|ref|YP_004458221.1|	-	0.065	13.2	0.3	0.82	9.6	0.0	2.4	1	1	0	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
DUF2250	PF10007.4	gi|332796721|ref|YP_004458221.1|	-	0.078	12.8	0.3	1.4	8.9	0.0	2.2	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
R3H	PF01424.17	gi|332796721|ref|YP_004458221.1|	-	0.086	12.5	0.0	0.31	10.7	0.0	1.9	1	0	0	1	1	1	0	R3H	domain
HTH_29	PF13551.1	gi|332796721|ref|YP_004458221.1|	-	0.1	12.7	0.0	0.23	11.5	0.0	1.7	1	1	0	1	1	1	0	Winged	helix-turn	helix
VirE	PF05272.6	gi|332796721|ref|YP_004458221.1|	-	0.11	12.0	0.1	0.15	11.5	0.1	1.2	1	0	0	1	1	1	0	Virulence-associated	protein	E
HTH_20	PF12840.2	gi|332796721|ref|YP_004458221.1|	-	0.11	12.3	0.0	0.25	11.1	0.0	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
MerR	PF00376.18	gi|332796721|ref|YP_004458221.1|	-	0.13	11.8	0.2	2.2	7.9	0.1	2.6	1	1	0	1	1	1	0	MerR	family	regulatory	protein
MFS_1	PF07690.11	gi|332796722|ref|YP_004458222.1|	-	6.8e-33	113.8	46.7	3.3e-20	72.1	13.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332796722|ref|YP_004458222.1|	-	0.019	13.1	0.2	0.019	13.1	0.1	2.1	2	0	0	2	2	2	0	Transmembrane	secretion	effector
UNC-93	PF05978.11	gi|332796722|ref|YP_004458222.1|	-	0.76	9.2	24.1	0.18	11.2	2.4	3.5	2	2	1	3	3	3	0	Ion	channel	regulatory	protein	UNC-93
Ldh_2	PF02615.9	gi|332796723|ref|YP_004458223.1|	-	2.7e-66	223.6	0.0	5.1e-66	222.7	0.0	1.5	1	1	0	1	1	1	1	Malate/L-lactate	dehydrogenase
AA_permease_2	PF13520.1	gi|332796724|ref|YP_004458224.1|	-	1.1e-27	96.6	55.8	1.7e-27	96.0	38.7	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332796724|ref|YP_004458224.1|	-	1e-18	66.9	58.9	2.3e-18	65.8	40.8	1.5	1	1	0	1	1	1	1	Amino	acid	permease
DUF1691	PF07950.6	gi|332796724|ref|YP_004458224.1|	-	0.015	15.2	2.4	1.3	9.0	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1691)
Herpes_HEPA	PF03324.9	gi|332796724|ref|YP_004458224.1|	-	0.022	14.7	1.5	0.057	13.4	0.4	2.3	2	0	0	2	2	2	0	Herpesvirus	DNA	helicase/primase	complex	associated	protein
Adeno_E3_CR2	PF02439.10	gi|332796724|ref|YP_004458224.1|	-	0.074	12.6	1.4	0.96	9.0	0.1	3.2	2	0	0	2	2	2	0	Adenovirus	E3	region	protein	CR2
Fer4	PF00037.22	gi|332796725|ref|YP_004458225.1|	-	3.1e-14	51.8	13.8	2.7e-07	29.8	4.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|332796725|ref|YP_004458225.1|	-	3.9e-11	43.0	6.6	5.1e-11	42.6	4.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332796725|ref|YP_004458225.1|	-	3.2e-10	39.4	14.1	3.1e-06	26.8	4.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|332796725|ref|YP_004458225.1|	-	2.2e-09	36.9	19.0	3.9e-07	29.7	5.5	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332796725|ref|YP_004458225.1|	-	5.2e-09	36.3	7.9	9.7e-09	35.4	5.6	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332796725|ref|YP_004458225.1|	-	3.5e-08	33.1	5.6	4.6e-08	32.7	3.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332796725|ref|YP_004458225.1|	-	5.5e-08	32.7	9.2	5e-06	26.4	4.4	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332796725|ref|YP_004458225.1|	-	6.2e-07	28.9	11.8	0.0036	17.1	0.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|332796725|ref|YP_004458225.1|	-	6.2e-06	26.1	8.3	0.017	15.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|332796725|ref|YP_004458225.1|	-	1e-05	25.6	14.6	0.0077	16.7	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332796725|ref|YP_004458225.1|	-	1.8e-05	25.0	0.5	0.19	12.0	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|332796725|ref|YP_004458225.1|	-	4.4e-05	23.9	9.4	0.033	14.7	0.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|332796725|ref|YP_004458225.1|	-	0.0001	22.6	7.4	0.0022	18.4	0.5	2.3	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332796725|ref|YP_004458225.1|	-	0.00013	22.2	9.7	0.043	14.2	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|332796725|ref|YP_004458225.1|	-	0.00034	21.2	8.0	0.0069	17.1	1.6	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
DUF2761	PF10959.3	gi|332796725|ref|YP_004458225.1|	-	0.02	14.4	0.0	0.024	14.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2761)
Rubrerythrin	PF02915.12	gi|332796726|ref|YP_004458226.1|	-	8.1e-28	97.4	1.2	1.1e-27	97.0	0.8	1.2	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|332796726|ref|YP_004458226.1|	-	6.5e-08	32.4	1.0	0.0012	18.6	0.0	2.1	1	1	1	2	2	2	2	Ferritin-like	domain
PSD4	PF07631.6	gi|332796726|ref|YP_004458226.1|	-	0.051	13.9	0.0	9	6.6	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1592)
DUF3501	PF12007.3	gi|332796727|ref|YP_004458227.1|	-	1.6e-53	181.2	3.5	1.8e-53	181.0	2.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3501)
RVP	PF00077.15	gi|332796729|ref|YP_004458229.1|	-	0.0084	16.0	0.0	0.011	15.6	0.0	1.1	1	0	0	1	1	1	1	Retroviral	aspartyl	protease
Asp_protease_2	PF13650.1	gi|332796729|ref|YP_004458229.1|	-	0.031	14.7	0.0	0.05	14.1	0.0	1.3	1	1	0	1	1	1	0	Aspartyl	protease
DUF929	PF06053.6	gi|332796730|ref|YP_004458230.1|	-	4.7e-63	212.5	9.2	5.5e-63	212.3	6.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
AhpC-TSA	PF00578.16	gi|332796731|ref|YP_004458231.1|	-	4.5e-35	120.0	0.0	7e-35	119.4	0.0	1.3	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|332796731|ref|YP_004458231.1|	-	1.3e-17	63.7	0.0	1.9e-17	63.2	0.0	1.2	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|332796731|ref|YP_004458231.1|	-	3.6e-09	36.1	1.0	4.5e-09	35.8	0.0	1.7	2	0	0	2	2	2	1	C-terminal	domain	of	1-Cys	peroxiredoxin
Glyco_tranf_2_3	PF13641.1	gi|332796733|ref|YP_004458233.1|	-	9.1e-44	149.9	0.0	1.2e-43	149.5	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|332796733|ref|YP_004458233.1|	-	2.5e-31	108.6	0.0	3.4e-31	108.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|332796733|ref|YP_004458233.1|	-	1.2e-29	103.4	0.3	1.8e-29	102.8	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|332796733|ref|YP_004458233.1|	-	3.2e-17	62.3	0.0	5.1e-17	61.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|332796733|ref|YP_004458233.1|	-	3.7e-12	45.9	0.0	9.3e-12	44.6	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Cellulose_synt	PF03552.9	gi|332796733|ref|YP_004458233.1|	-	0.014	13.7	5.7	0.02	13.2	4.0	1.1	1	0	0	1	1	1	0	Cellulose	synthase
Glyco_tranf_2_4	PF13704.1	gi|332796733|ref|YP_004458233.1|	-	0.14	12.4	0.0	0.23	11.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Cas_Cas4	PF01930.12	gi|332796734|ref|YP_004458234.1|	-	2.9e-10	40.3	0.0	3.4e-10	40.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|332796734|ref|YP_004458234.1|	-	1.2e-08	34.7	0.4	2.9e-08	33.4	0.3	1.7	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
PDDEXK_3	PF13366.1	gi|332796734|ref|YP_004458234.1|	-	1.1e-05	25.4	0.1	1.6e-05	24.9	0.1	1.2	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
PTS_EIIA_1	PF00358.15	gi|332796734|ref|YP_004458234.1|	-	0.0017	17.8	0.2	0.0025	17.3	0.2	1.2	1	0	0	1	1	1	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
DUF1703	PF08011.6	gi|332796734|ref|YP_004458234.1|	-	0.0086	15.8	0.2	0.019	14.6	0.1	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1703)
SfsA	PF03749.8	gi|332796734|ref|YP_004458234.1|	-	0.049	13.0	0.5	0.28	10.6	0.4	1.9	1	1	0	1	1	1	0	Sugar	fermentation	stimulation	protein
Phos_pyr_kin	PF08543.7	gi|332796735|ref|YP_004458235.1|	-	2e-83	279.3	0.3	2.7e-83	278.9	0.2	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.19	gi|332796735|ref|YP_004458235.1|	-	1.3e-14	54.0	0.2	2.5e-14	53.1	0.1	1.3	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|332796735|ref|YP_004458235.1|	-	1.2e-07	31.2	0.1	2.2e-07	30.4	0.1	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
PfkB	PF00294.19	gi|332796736|ref|YP_004458236.1|	-	8.3e-59	199.1	0.4	1.1e-58	198.7	0.3	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|332796736|ref|YP_004458236.1|	-	3.3e-10	39.5	0.1	5e-10	38.9	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.12	gi|332796736|ref|YP_004458236.1|	-	0.00042	19.6	0.0	0.00067	19.0	0.0	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
Hist_deacetyl	PF00850.14	gi|332796737|ref|YP_004458237.1|	-	3.6e-62	210.4	0.0	4.3e-62	210.1	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796738|ref|YP_004458238.1|	-	4.1e-21	74.4	0.0	6.4e-21	73.7	0.0	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|332796738|ref|YP_004458238.1|	-	0.0041	16.9	0.2	0.0064	16.2	0.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|332796738|ref|YP_004458238.1|	-	0.0084	15.5	0.3	3	7.4	0.0	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332796738|ref|YP_004458238.1|	-	0.026	13.7	3.0	1.1	8.5	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|332796738|ref|YP_004458238.1|	-	0.027	14.1	2.5	3.8	7.3	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
OrfB_IS605	PF01385.14	gi|332796738|ref|YP_004458238.1|	-	0.073	12.4	0.0	0.097	12.0	0.0	1.2	1	0	0	1	1	1	0	Probable	transposase
DUF1610	PF07754.6	gi|332796738|ref|YP_004458238.1|	-	0.09	12.9	0.4	0.09	12.9	0.3	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
PhnA_Zn_Ribbon	PF08274.7	gi|332796738|ref|YP_004458238.1|	-	0.1	12.4	0.2	1.1	9.0	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.6	gi|332796738|ref|YP_004458238.1|	-	0.53	9.8	4.0	4.6	6.8	2.8	2.1	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|332796738|ref|YP_004458238.1|	-	0.58	9.5	4.0	7.3	6.0	0.3	2.5	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-ZPR1	PF03367.8	gi|332796738|ref|YP_004458238.1|	-	2.6	7.1	4.2	9.2	5.3	0.1	2.5	2	1	1	3	3	3	0	ZPR1	zinc-finger	domain
Zn_Tnp_IS1595	PF12760.2	gi|332796738|ref|YP_004458238.1|	-	5.3	6.9	6.1	85	3.0	4.2	2.2	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
GATase_4	PF13230.1	gi|332796739|ref|YP_004458239.1|	-	3.6e-05	22.5	0.0	5e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|332796739|ref|YP_004458239.1|	-	5.2e-05	23.2	0.0	8.4e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Lactamase_B_2	PF12706.2	gi|332796740|ref|YP_004458240.1|	-	5.7e-10	39.0	0.0	6.7e-10	38.8	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|332796740|ref|YP_004458240.1|	-	0.0083	15.7	0.0	0.018	14.6	0.0	1.6	1	1	1	2	2	2	1	Metallo-beta-lactamase	superfamily
Peptidase_M24	PF00557.19	gi|332796741|ref|YP_004458241.1|	-	4.3e-57	193.0	0.1	6.4e-57	192.4	0.0	1.3	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|332796741|ref|YP_004458241.1|	-	2.7e-17	63.4	0.0	5.9e-17	62.4	0.0	1.6	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Aminotran_1_2	PF00155.16	gi|332796742|ref|YP_004458242.1|	-	2.7e-29	102.2	0.0	3e-29	102.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|332796742|ref|YP_004458242.1|	-	4.4e-08	32.0	0.0	1.6e-07	30.2	0.0	1.7	1	1	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
OCD_Mu_crystall	PF02423.10	gi|332796743|ref|YP_004458243.1|	-	6.8e-37	126.9	0.1	9.1e-37	126.4	0.1	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|332796743|ref|YP_004458243.1|	-	2.7e-05	24.3	0.2	5.6e-05	23.2	0.1	1.5	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|332796743|ref|YP_004458243.1|	-	8.8e-05	22.8	0.6	0.0029	18.0	0.1	2.3	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
HTH_11	PF08279.7	gi|332796744|ref|YP_004458244.1|	-	4.5e-06	26.1	1.0	1.1e-05	25.0	0.1	1.9	2	0	0	2	2	2	1	HTH	domain
HTH_24	PF13412.1	gi|332796744|ref|YP_004458244.1|	-	9.9e-06	24.8	0.0	1.9e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FeoC	PF09012.5	gi|332796744|ref|YP_004458244.1|	-	0.00012	21.6	0.0	0.0002	20.9	0.0	1.4	1	1	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_DeoR	PF08220.7	gi|332796744|ref|YP_004458244.1|	-	0.00042	19.8	0.0	0.00079	18.9	0.0	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
TrmB	PF01978.14	gi|332796744|ref|YP_004458244.1|	-	0.00077	19.1	0.5	0.0021	17.7	0.1	1.7	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|332796744|ref|YP_004458244.1|	-	0.001	18.9	0.2	0.002	18.0	0.0	1.6	2	0	0	2	2	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.17	gi|332796744|ref|YP_004458244.1|	-	0.0012	18.4	0.0	0.0019	17.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|332796744|ref|YP_004458244.1|	-	0.0013	18.3	0.0	0.0017	17.9	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_Mga	PF08280.6	gi|332796744|ref|YP_004458244.1|	-	0.0016	18.1	0.1	0.0039	16.9	0.0	1.6	2	0	0	2	2	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Shugoshin_N	PF07558.6	gi|332796744|ref|YP_004458244.1|	-	0.0028	17.3	3.5	0.0081	15.8	2.4	1.9	1	0	0	1	1	1	1	Shugoshin	N-terminal	coiled-coil	region
HTH_27	PF13463.1	gi|332796744|ref|YP_004458244.1|	-	0.0029	17.8	0.1	0.0054	17.0	0.0	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|332796744|ref|YP_004458244.1|	-	0.0044	16.5	4.8	0.037	13.5	0.1	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
DUF977	PF06163.6	gi|332796744|ref|YP_004458244.1|	-	0.005	16.5	1.4	0.48	10.1	0.0	2.4	2	1	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF977)
HTH_IclR	PF09339.5	gi|332796744|ref|YP_004458244.1|	-	0.0051	16.3	0.0	0.0075	15.8	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF4618	PF15397.1	gi|332796744|ref|YP_004458244.1|	-	0.016	14.5	6.1	0.14	11.4	2.7	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
HALZ	PF02183.13	gi|332796744|ref|YP_004458244.1|	-	0.018	14.7	1.3	0.018	14.7	0.9	2.0	2	1	0	2	2	2	0	Homeobox	associated	leucine	zipper
DUF1875	PF08961.5	gi|332796744|ref|YP_004458244.1|	-	0.02	14.2	1.1	0.02	14.1	0.8	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1875)
SlyX	PF04102.7	gi|332796744|ref|YP_004458244.1|	-	0.02	15.2	0.4	0.037	14.3	0.3	1.5	1	0	0	1	1	1	0	SlyX
Bap31	PF05529.7	gi|332796744|ref|YP_004458244.1|	-	0.021	14.3	1.8	0.024	14.1	1.2	1.1	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
DivIC	PF04977.10	gi|332796744|ref|YP_004458244.1|	-	0.024	14.1	3.1	0.024	14.1	2.2	2.1	1	1	1	2	2	2	0	Septum	formation	initiator
DUF1319	PF07028.6	gi|332796744|ref|YP_004458244.1|	-	0.036	14.2	6.6	0.072	13.2	4.6	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
EAP30	PF04157.11	gi|332796744|ref|YP_004458244.1|	-	0.051	12.7	0.4	2.3	7.3	0.0	2.0	2	0	0	2	2	2	0	EAP30/Vps36	family
TMF_DNA_bd	PF12329.3	gi|332796744|ref|YP_004458244.1|	-	0.053	13.3	6.7	0.1	12.3	4.6	1.6	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
Rrf2	PF02082.15	gi|332796744|ref|YP_004458244.1|	-	0.057	13.5	0.6	0.15	12.2	0.0	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
DUF1640	PF07798.6	gi|332796744|ref|YP_004458244.1|	-	0.059	13.4	3.6	0.072	13.1	2.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
Fib_alpha	PF08702.5	gi|332796744|ref|YP_004458244.1|	-	0.074	13.1	4.4	0.1	12.7	3.1	1.3	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
HTH_45	PF14947.1	gi|332796744|ref|YP_004458244.1|	-	0.087	12.6	1.0	0.11	12.3	0.1	1.6	2	0	0	2	2	1	0	Winged	helix-turn-helix
Viral_P18	PF04521.8	gi|332796744|ref|YP_004458244.1|	-	0.092	12.1	0.4	0.16	11.3	0.3	1.4	1	0	0	1	1	1	0	ssRNA	positive	strand	viral	18kD	cysteine	rich	protein
TSC22	PF01166.13	gi|332796744|ref|YP_004458244.1|	-	0.098	12.6	0.8	0.098	12.6	0.6	2.2	1	1	1	2	2	2	0	TSC-22/dip/bun	family
F-112	PF09645.5	gi|332796744|ref|YP_004458244.1|	-	0.1	12.5	1.8	2.6	7.9	0.0	2.2	1	1	1	2	2	2	0	F-112	protein
APG6	PF04111.7	gi|332796744|ref|YP_004458244.1|	-	0.12	11.3	3.6	0.14	11.2	2.5	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg6
ATG16	PF08614.6	gi|332796744|ref|YP_004458244.1|	-	0.14	11.9	3.4	0.23	11.2	2.4	1.4	1	0	0	1	1	1	0	Autophagy	protein	16	(ATG16)
DUF904	PF06005.7	gi|332796744|ref|YP_004458244.1|	-	0.16	12.2	5.9	0.49	10.7	1.6	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
Prominin	PF05478.6	gi|332796744|ref|YP_004458244.1|	-	0.18	9.3	1.4	0.21	9.0	1.0	1.0	1	0	0	1	1	1	0	Prominin
Med9	PF07544.8	gi|332796744|ref|YP_004458244.1|	-	0.19	11.4	3.4	15	5.4	1.9	2.5	2	1	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Prefoldin_2	PF01920.15	gi|332796744|ref|YP_004458244.1|	-	0.21	11.3	8.3	0.053	13.2	3.7	1.5	2	0	0	2	2	1	0	Prefoldin	subunit
DUF3781	PF12636.2	gi|332796744|ref|YP_004458244.1|	-	0.24	11.4	2.4	0.41	10.6	0.2	2.2	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF3781)
bZIP_2	PF07716.10	gi|332796744|ref|YP_004458244.1|	-	0.35	10.7	3.0	0.79	9.5	1.0	2.0	1	1	1	2	2	2	0	Basic	region	leucine	zipper
Sec3_C_2	PF15278.1	gi|332796744|ref|YP_004458244.1|	-	0.56	10.3	2.8	18	5.5	0.8	2.3	2	0	0	2	2	2	0	Sec3	exocyst	complex	subunit
DUF2250	PF10007.4	gi|332796744|ref|YP_004458244.1|	-	0.69	9.8	3.7	0.34	10.8	0.4	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
bZIP_1	PF00170.16	gi|332796744|ref|YP_004458244.1|	-	0.81	9.6	6.1	0.68	9.9	2.5	2.1	1	1	1	2	2	2	0	bZIP	transcription	factor
DUF972	PF06156.8	gi|332796744|ref|YP_004458244.1|	-	0.95	9.8	3.6	0.64	10.3	0.9	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
FlaC_arch	PF05377.6	gi|332796744|ref|YP_004458244.1|	-	1.2	9.0	5.5	1.7	8.5	2.5	2.1	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Glycos_transf_2	PF00535.21	gi|332796745|ref|YP_004458245.1|	-	1.2e-20	73.8	0.0	1.6e-20	73.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|332796745|ref|YP_004458245.1|	-	0.0026	17.5	0.0	0.0031	17.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
NTP_transf_3	PF12804.2	gi|332796745|ref|YP_004458245.1|	-	0.058	13.4	0.0	0.062	13.3	0.0	1.2	1	0	0	1	1	1	0	MobA-like	NTP	transferase	domain
Glyco_transf_21	PF13506.1	gi|332796745|ref|YP_004458245.1|	-	0.086	12.1	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|332796745|ref|YP_004458245.1|	-	0.096	13.0	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF1947	PF09183.5	gi|332796746|ref|YP_004458246.1|	-	8.8e-27	92.6	1.2	1.8e-26	91.6	0.8	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
PUA	PF01472.15	gi|332796746|ref|YP_004458246.1|	-	1.5e-17	63.0	0.2	2.1e-17	62.6	0.1	1.2	1	0	0	1	1	1	1	PUA	domain
KilA-N	PF04383.8	gi|332796746|ref|YP_004458246.1|	-	0.047	13.3	0.0	0.067	12.8	0.0	1.4	1	0	0	1	1	1	0	KilA-N	domain
E2_bind	PF08825.5	gi|332796746|ref|YP_004458246.1|	-	0.061	13.0	0.2	9.1	6.1	0.0	2.9	3	1	0	3	3	3	0	E2	binding	domain
DEK_C	PF08766.6	gi|332796746|ref|YP_004458246.1|	-	0.088	12.5	0.1	2.5	7.9	0.1	2.3	2	0	0	2	2	2	0	DEK	C	terminal	domain
Ald_Xan_dh_C2	PF02738.13	gi|332796747|ref|YP_004458247.1|	-	2.2e-130	435.5	0.0	3e-130	435.1	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|332796747|ref|YP_004458247.1|	-	6.4e-17	61.6	0.0	1.7e-14	53.8	0.0	2.5	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Peptidase_M48	PF01435.13	gi|332796748|ref|YP_004458248.1|	-	3.1e-19	69.4	5.0	2.6e-17	63.1	0.8	2.5	1	1	1	2	2	2	2	Peptidase	family	M48
DUF2268	PF10026.4	gi|332796748|ref|YP_004458248.1|	-	0.0028	17.0	0.1	0.0095	15.3	0.1	1.7	2	0	0	2	2	2	1	Predicted	Zn-dependent	protease	(DUF2268)
Peptidase_M56	PF05569.6	gi|332796748|ref|YP_004458248.1|	-	0.01	14.8	2.7	0.021	13.8	1.9	1.6	1	1	0	1	1	1	0	BlaR1	peptidase	M56
DUF360	PF04020.8	gi|332796748|ref|YP_004458248.1|	-	0.11	12.8	8.0	0.21	11.9	0.8	2.3	2	0	0	2	2	2	0	Membrane	protein	of	unknown	function
DUF45	PF01863.12	gi|332796748|ref|YP_004458248.1|	-	0.17	11.6	2.7	0.45	10.2	1.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF45
DUF955	PF06114.8	gi|332796748|ref|YP_004458248.1|	-	0.27	10.9	4.0	0.72	9.5	2.8	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF955)
2TM	PF13239.1	gi|332796748|ref|YP_004458248.1|	-	0.65	10.0	6.6	0.14	12.2	1.1	2.1	2	0	0	2	2	2	0	2TM	domain
DUF2705	PF10920.3	gi|332796748|ref|YP_004458248.1|	-	3.4	6.7	13.3	1.7	7.8	3.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2705)
PRA1	PF03208.14	gi|332796748|ref|YP_004458248.1|	-	7.7	5.8	10.4	46	3.3	7.2	2.0	1	1	0	1	1	1	0	PRA1	family	protein
ADH_N	PF08240.7	gi|332796749|ref|YP_004458249.1|	-	1.3e-25	89.2	0.3	1.4e-24	85.9	0.1	2.1	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|332796749|ref|YP_004458249.1|	-	1.4e-25	89.3	0.1	2.3e-25	88.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|332796749|ref|YP_004458249.1|	-	0.00074	20.4	0.1	0.0018	19.1	0.0	1.6	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
CoA_binding	PF02629.14	gi|332796749|ref|YP_004458249.1|	-	0.072	13.6	0.4	0.21	12.0	0.2	1.9	1	1	1	2	2	2	0	CoA	binding	domain
Pyr_redox_3	PF13738.1	gi|332796749|ref|YP_004458249.1|	-	0.39	10.7	2.5	1.5	8.8	0.7	2.1	1	1	1	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
CobD_Cbib	PF03186.8	gi|332796750|ref|YP_004458250.1|	-	1.2e-77	260.9	0.0	1.4e-77	260.7	0.0	1.0	1	0	0	1	1	1	1	CobD/Cbib	protein
CobS	PF02654.10	gi|332796751|ref|YP_004458251.1|	-	2.9e-30	105.5	6.9	3.9e-30	105.1	4.8	1.1	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
TadE	PF07811.7	gi|332796751|ref|YP_004458251.1|	-	0.39	10.6	0.0	0.39	10.6	0.0	2.7	3	0	0	3	3	3	0	TadE-like	protein
DUF1461	PF07314.6	gi|332796751|ref|YP_004458251.1|	-	0.58	9.8	8.0	0.082	12.6	0.6	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1461)
GATase_3	PF07685.9	gi|332796752|ref|YP_004458252.1|	-	5e-29	100.9	0.0	7.4e-29	100.3	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|332796752|ref|YP_004458252.1|	-	3.3e-08	33.1	0.0	6e-08	32.3	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|332796752|ref|YP_004458252.1|	-	5.3e-07	29.4	0.0	8.7e-06	25.4	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
GATase	PF00117.23	gi|332796752|ref|YP_004458252.1|	-	0.00086	18.8	0.0	0.0015	18.0	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
DUF910	PF06014.6	gi|332796752|ref|YP_004458252.1|	-	0.1	12.5	0.8	0.24	11.3	0.6	1.6	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF910)
GMP_synt_C	PF00958.17	gi|332796753|ref|YP_004458253.1|	-	2e-23	81.9	3.3	4.6e-23	80.7	0.9	2.6	2	1	0	2	2	2	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|332796753|ref|YP_004458253.1|	-	6e-12	44.9	0.1	4.1e-11	42.2	0.1	2.1	1	1	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|332796753|ref|YP_004458253.1|	-	1.5e-07	31.1	0.0	2.5e-07	30.3	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
ThiI	PF02568.9	gi|332796753|ref|YP_004458253.1|	-	2.6e-05	23.7	0.4	0.00041	19.8	0.0	2.8	2	2	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.8	gi|332796753|ref|YP_004458253.1|	-	2.8e-05	23.4	0.0	0.0019	17.4	0.0	2.4	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|332796753|ref|YP_004458253.1|	-	0.00034	19.3	0.0	0.048	12.1	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
DUF2392	PF10288.4	gi|332796753|ref|YP_004458253.1|	-	0.0034	17.6	0.0	0.013	15.7	0.0	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2392)
Asn_synthase	PF00733.16	gi|332796753|ref|YP_004458253.1|	-	0.026	14.0	0.0	0.042	13.3	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
DUF1152	PF06626.7	gi|332796753|ref|YP_004458253.1|	-	0.049	12.7	0.1	0.1	11.7	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1152)
Peptidase_M48	PF01435.13	gi|332796754|ref|YP_004458254.1|	-	1.4e-30	106.5	0.0	2e-30	106.0	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|332796754|ref|YP_004458254.1|	-	0.00039	19.4	0.0	0.0033	16.4	0.0	2.1	2	0	0	2	2	2	1	BlaR1	peptidase	M56
Pox_A14	PF05767.7	gi|332796754|ref|YP_004458254.1|	-	0.26	11.2	6.1	4.1	7.4	0.0	2.4	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
DUF4191	PF13829.1	gi|332796754|ref|YP_004458254.1|	-	1.4	7.9	3.4	1.5	7.9	0.9	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4191)
DUF4131	PF13567.1	gi|332796754|ref|YP_004458254.1|	-	4.3	6.6	8.2	14	5.0	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
CBS	PF00571.23	gi|332796755|ref|YP_004458255.1|	-	6.9e-35	118.5	2.7	2.2e-17	62.5	0.1	2.0	2	0	0	2	2	2	2	CBS	domain
4HB_MCP_1	PF12729.2	gi|332796755|ref|YP_004458255.1|	-	0.044	13.1	2.3	1.7	7.9	0.0	2.6	2	1	1	3	3	3	0	Four	helix	bundle	sensory	module	for	signal	transduction
MH1	PF03165.11	gi|332796756|ref|YP_004458256.1|	-	0.046	13.7	0.3	0.051	13.5	0.2	1.1	1	0	0	1	1	1	0	MH1	domain
RHH_4	PF13467.1	gi|332796756|ref|YP_004458256.1|	-	0.062	13.1	0.1	0.082	12.7	0.1	1.2	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
DUF2087	PF09860.4	gi|332796756|ref|YP_004458256.1|	-	0.09	12.5	0.7	0.65	9.7	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2087)
DeoC	PF01791.4	gi|332796758|ref|YP_004458258.1|	-	4.7e-32	111.1	0.0	5.5e-32	110.9	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DUF3201	PF11447.3	gi|332796758|ref|YP_004458258.1|	-	0.01	15.2	0.1	0.016	14.5	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3201)
ThiG	PF05690.9	gi|332796758|ref|YP_004458258.1|	-	0.027	13.5	0.3	0.29	10.1	0.0	2.5	3	0	0	3	3	3	0	Thiazole	biosynthesis	protein	ThiG
HTH_psq	PF05225.11	gi|332796758|ref|YP_004458258.1|	-	0.12	11.9	0.0	0.25	10.8	0.0	1.6	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
NTP_transferase	PF00483.18	gi|332796759|ref|YP_004458259.1|	-	1.4e-28	99.9	0.0	1.5e-28	99.7	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|332796759|ref|YP_004458259.1|	-	1.3e-08	35.0	0.0	1.7e-08	34.7	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Glycos_transf_2	PF00535.21	gi|332796759|ref|YP_004458259.1|	-	0.13	11.8	0.0	0.2	11.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Epimerase	PF01370.16	gi|332796760|ref|YP_004458260.1|	-	6.1e-27	94.5	0.0	8.6e-27	94.0	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|332796760|ref|YP_004458260.1|	-	4.5e-07	29.0	0.0	2e-05	23.6	0.0	2.4	2	1	0	2	2	2	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|332796760|ref|YP_004458260.1|	-	0.0019	17.1	0.0	0.0038	16.1	0.0	1.6	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|332796760|ref|YP_004458260.1|	-	0.0026	17.8	0.0	0.95	9.4	0.0	2.3	2	0	0	2	2	2	2	NADH(P)-binding
adh_short	PF00106.20	gi|332796760|ref|YP_004458260.1|	-	0.015	15.1	0.0	0.045	13.6	0.0	1.7	1	1	0	1	1	1	0	short	chain	dehydrogenase
3Beta_HSD	PF01073.14	gi|332796760|ref|YP_004458260.1|	-	0.031	12.9	0.1	0.077	11.6	0.1	1.6	1	1	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
KR	PF08659.5	gi|332796760|ref|YP_004458260.1|	-	0.034	13.8	0.0	0.069	12.8	0.0	1.5	1	0	0	1	1	1	0	KR	domain
UDPG_MGDP_dh_N	PF03721.9	gi|332796760|ref|YP_004458260.1|	-	0.1	11.9	0.0	0.19	11.1	0.0	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
BcrAD_BadFG	PF01869.15	gi|332796761|ref|YP_004458261.1|	-	7.1e-42	143.5	0.6	8.2e-42	143.3	0.4	1.0	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
G_glu_transpept	PF01019.16	gi|332796762|ref|YP_004458262.1|	-	1.8e-95	320.3	0.0	2.5e-95	319.9	0.0	1.2	1	0	0	1	1	1	1	Gamma-glutamyltranspeptidase
MazG	PF03819.12	gi|332796764|ref|YP_004458264.1|	-	8.7e-13	48.0	0.7	8.7e-13	48.0	0.5	1.4	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|332796764|ref|YP_004458264.1|	-	0.0023	18.1	0.5	0.0027	17.9	0.4	1.2	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|332796764|ref|YP_004458264.1|	-	0.026	14.4	0.5	0.061	13.2	0.3	1.7	1	1	0	1	1	1	0	MazG-like	family
DUF2709	PF10915.3	gi|332796764|ref|YP_004458264.1|	-	0.069	12.1	0.0	0.07	12.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2709)
Helicase_RecD	PF05127.9	gi|332796765|ref|YP_004458265.1|	-	9.3e-47	158.9	0.0	1.8e-46	158.0	0.0	1.5	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|332796765|ref|YP_004458265.1|	-	1.4e-41	141.9	0.0	8.6e-41	139.4	0.0	2.1	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|332796765|ref|YP_004458265.1|	-	6.8e-22	76.9	0.1	1.5e-21	75.8	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|332796765|ref|YP_004458265.1|	-	3.5e-07	30.2	0.0	1.5e-06	28.2	0.0	2.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|332796765|ref|YP_004458265.1|	-	4.9e-07	29.6	0.0	3.7e-06	26.8	0.0	2.4	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
tRNA_bind_2	PF13725.1	gi|332796765|ref|YP_004458265.1|	-	0.00018	21.5	0.1	0.00062	19.8	0.0	1.9	2	0	0	2	2	2	1	Possible	tRNA	binding	domain
Acetyltransf_CG	PF14542.1	gi|332796765|ref|YP_004458265.1|	-	0.023	14.5	0.0	0.14	12.0	0.0	2.2	2	0	0	2	2	2	0	GCN5-related	N-acetyl-transferase
HrpF	PF06266.7	gi|332796767|ref|YP_004458267.1|	-	0.1	12.7	0.0	0.79	9.8	0.0	1.9	1	1	1	2	2	2	0	HrpF	protein
AA_permease_2	PF13520.1	gi|332796768|ref|YP_004458268.1|	-	3.5e-16	58.7	58.5	4.5e-16	58.3	33.8	2.0	1	1	1	2	2	2	2	Amino	acid	permease
AA_permease	PF00324.16	gi|332796768|ref|YP_004458268.1|	-	2.2e-13	49.3	46.8	2.2e-13	49.3	32.4	1.6	2	0	0	2	2	2	1	Amino	acid	permease
Usp	PF00582.21	gi|332796769|ref|YP_004458269.1|	-	1.1e-28	100.1	0.1	1.2e-28	100.0	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
DXP_reductoisom	PF02670.11	gi|332796769|ref|YP_004458269.1|	-	0.017	15.6	0.0	0.021	15.3	0.0	1.1	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
PrpR_N	PF06506.6	gi|332796769|ref|YP_004458269.1|	-	0.023	14.0	0.1	0.029	13.7	0.1	1.2	1	0	0	1	1	1	0	Propionate	catabolism	activator
AP_endonuc_2	PF01261.19	gi|332796769|ref|YP_004458269.1|	-	0.029	13.6	0.0	0.034	13.4	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
PmbA_TldD	PF01523.11	gi|332796770|ref|YP_004458270.1|	-	8.7e-39	133.5	0.4	1.2e-38	133.1	0.3	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF4565	PF15127.1	gi|332796770|ref|YP_004458270.1|	-	0.034	14.4	0.3	0.69	10.2	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4565)
PmbA_TldD	PF01523.11	gi|332796771|ref|YP_004458271.1|	-	1.8e-53	181.7	1.8	2.2e-53	181.4	1.2	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
NikR_C	PF08753.6	gi|332796772|ref|YP_004458272.1|	-	1.2e-21	76.3	2.2	1.8e-21	75.8	1.5	1.3	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
DUF2811	PF10929.3	gi|332796772|ref|YP_004458272.1|	-	1.4e-05	24.9	0.0	2.6e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2811)
RHH_1	PF01402.16	gi|332796772|ref|YP_004458272.1|	-	0.0036	17.1	0.6	0.0097	15.7	0.0	2.1	3	0	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|332796772|ref|YP_004458272.1|	-	0.039	13.6	1.3	0.37	10.5	0.0	2.7	2	1	0	2	2	2	0	Ribbon-helix-helix	domain
COP-gamma_platf	PF08752.5	gi|332796772|ref|YP_004458272.1|	-	0.041	13.7	0.2	0.058	13.2	0.1	1.3	1	0	0	1	1	1	0	Coatomer	gamma	subunit	appendage	platform	subdomain
Pribosyl_synth	PF14572.1	gi|332796772|ref|YP_004458272.1|	-	0.1	12.3	2.3	0.13	12.0	1.6	1.2	1	1	0	1	1	1	0	Phosphoribosyl	synthetase-associated	domain
B3_4	PF03483.12	gi|332796773|ref|YP_004458273.1|	-	1.9e-26	92.5	0.0	3.2e-26	91.8	0.0	1.4	1	0	0	1	1	1	1	B3/4	domain
Homoserine_dh	PF00742.14	gi|332796774|ref|YP_004458274.1|	-	2.9e-50	170.4	0.1	6.1e-50	169.3	0.0	1.6	2	0	0	2	2	2	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.11	gi|332796774|ref|YP_004458274.1|	-	1.5e-14	54.4	0.0	2.5e-14	53.6	0.0	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|332796774|ref|YP_004458274.1|	-	0.044	14.0	0.0	0.076	13.3	0.0	1.5	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|332796774|ref|YP_004458274.1|	-	0.1	11.5	0.0	0.16	10.9	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
DUF2435	PF10363.4	gi|332796774|ref|YP_004458274.1|	-	0.11	12.4	0.0	0.2	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2435)
UbiA	PF01040.13	gi|332796775|ref|YP_004458275.1|	-	2.2e-31	109.0	24.5	2.8e-31	108.6	17.0	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
APS_kinase	PF01583.15	gi|332796776|ref|YP_004458276.1|	-	0.014	15.0	0.0	0.022	14.4	0.0	1.2	1	0	0	1	1	1	0	Adenylylsulphate	kinase
TauE	PF01925.14	gi|332796776|ref|YP_004458276.1|	-	0.045	13.2	0.5	0.053	12.9	0.3	1.1	1	0	0	1	1	1	0	Sulfite	exporter	TauE/SafE
ECH	PF00378.15	gi|332796777|ref|YP_004458277.1|	-	1.5e-74	250.1	0.1	1.8e-74	249.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|332796777|ref|YP_004458277.1|	-	0.12	12.1	0.0	1.2	8.9	0.0	2.1	2	0	0	2	2	2	0	Peptidase	family	S49
Radical_SAM	PF04055.16	gi|332796778|ref|YP_004458278.1|	-	6.5e-21	75.2	0.2	2.9e-20	73.0	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332796778|ref|YP_004458278.1|	-	0.00032	20.8	0.0	0.00087	19.4	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
zinc_ribbon_2	PF13240.1	gi|332796778|ref|YP_004458278.1|	-	0.016	14.6	0.1	0.016	14.6	0.1	2.4	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332796778|ref|YP_004458278.1|	-	0.028	13.6	0.2	0.028	13.6	0.1	2.7	3	1	0	3	3	3	0	zinc-ribbon	domain
IBR	PF01485.16	gi|332796778|ref|YP_004458278.1|	-	0.13	12.1	0.1	0.13	12.1	0.0	2.1	3	0	0	3	3	3	0	IBR	domain
DZR	PF12773.2	gi|332796778|ref|YP_004458278.1|	-	0.22	11.3	0.2	0.22	11.3	0.1	2.7	3	1	0	3	3	3	0	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.11	gi|332796778|ref|YP_004458278.1|	-	5.7	6.7	7.7	0.68	9.6	0.8	2.6	2	1	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
DUF309	PF03745.9	gi|332796779|ref|YP_004458279.1|	-	3.9e-16	58.2	0.2	4.8e-16	57.9	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
Adenosine_kin	PF04008.9	gi|332796780|ref|YP_004458280.1|	-	4.9e-79	263.2	0.3	5.6e-79	263.0	0.2	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
CarboxypepD_reg	PF13620.1	gi|332796781|ref|YP_004458281.1|	-	0.00077	19.4	0.9	0.0014	18.6	0.2	1.8	2	1	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
DUF1416	PF07210.7	gi|332796781|ref|YP_004458281.1|	-	0.021	14.3	0.0	0.028	14.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1416)
Cna_B	PF05738.8	gi|332796781|ref|YP_004458281.1|	-	0.05	13.3	0.3	0.094	12.4	0.1	1.6	2	0	0	2	2	2	0	Cna	protein	B-type	domain
UPF0560	PF10577.4	gi|332796781|ref|YP_004458281.1|	-	0.093	10.9	0.0	0.11	10.7	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0560
VIT1	PF01988.14	gi|332796782|ref|YP_004458282.1|	-	4.1e-14	52.5	11.0	9.7e-13	48.0	7.6	2.0	1	1	0	1	1	1	1	VIT	family
DUF3735	PF12537.3	gi|332796782|ref|YP_004458282.1|	-	0.044	13.8	0.0	0.09	12.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3735)
EI24	PF07264.6	gi|332796782|ref|YP_004458282.1|	-	0.068	12.5	6.5	0.32	10.3	4.5	2.2	1	1	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
PGG	PF13962.1	gi|332796782|ref|YP_004458282.1|	-	0.54	9.8	4.5	0.37	10.4	0.9	2.0	2	1	1	3	3	3	0	Domain	of	unknown	function
DUF1673	PF07895.6	gi|332796782|ref|YP_004458282.1|	-	0.6	9.5	9.0	3.3	7.1	6.3	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
DUF4149	PF13664.1	gi|332796782|ref|YP_004458282.1|	-	2.3	8.3	8.2	18	5.4	0.1	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4149)
zf-C2HC5	PF06221.8	gi|332796783|ref|YP_004458283.1|	-	0.88	9.3	4.6	1.5	8.6	3.2	1.4	1	1	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Cupin_2	PF07883.6	gi|332796784|ref|YP_004458284.1|	-	5.5e-16	57.8	0.2	7.7e-16	57.3	0.2	1.2	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|332796784|ref|YP_004458284.1|	-	7.6e-12	44.8	0.0	1.2e-11	44.2	0.0	1.3	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|332796784|ref|YP_004458284.1|	-	6e-09	35.7	0.0	9.4e-09	35.0	0.0	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
CENP-C_C	PF11699.3	gi|332796784|ref|YP_004458284.1|	-	5.1e-07	29.5	0.1	1.5e-06	28.0	0.0	1.7	2	0	0	2	2	2	1	Mif2/CENP-C	like
ARD	PF03079.9	gi|332796784|ref|YP_004458284.1|	-	6.4e-05	22.9	1.1	0.00045	20.1	0.1	2.1	2	0	0	2	2	2	1	ARD/ARD'	family
MannoseP_isomer	PF01050.13	gi|332796784|ref|YP_004458284.1|	-	0.004	16.7	0.6	0.019	14.6	0.0	1.9	2	0	0	2	2	2	1	Mannose-6-phosphate	isomerase
Asp_Arg_Hydrox	PF05118.10	gi|332796784|ref|YP_004458284.1|	-	0.0094	15.8	0.0	0.023	14.5	0.0	1.8	1	1	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Auxin_BP	PF02041.11	gi|332796784|ref|YP_004458284.1|	-	0.019	14.4	0.1	0.041	13.3	0.1	1.6	1	1	0	1	1	1	0	Auxin	binding	protein
GPI	PF06560.6	gi|332796784|ref|YP_004458284.1|	-	0.027	13.4	0.3	0.063	12.3	0.2	1.6	1	1	0	1	1	1	0	Glucose-6-phosphate	isomerase	(GPI)
EutQ	PF06249.7	gi|332796784|ref|YP_004458284.1|	-	0.071	12.6	0.0	0.14	11.7	0.0	1.5	1	1	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
3HCDH_N	PF02737.13	gi|332796785|ref|YP_004458285.1|	-	3.4e-52	176.7	0.0	4.6e-52	176.2	0.0	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|332796785|ref|YP_004458285.1|	-	8e-17	61.4	0.2	1.8e-16	60.3	0.1	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|332796785|ref|YP_004458285.1|	-	3.9e-07	29.9	0.0	7.6e-07	28.9	0.0	1.5	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|332796785|ref|YP_004458285.1|	-	3.8e-05	23.5	0.1	0.00039	20.3	0.0	2.2	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.11	gi|332796785|ref|YP_004458285.1|	-	0.00033	20.1	0.0	0.0017	17.7	0.0	2.1	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.9	gi|332796785|ref|YP_004458285.1|	-	0.00041	19.7	0.1	0.00089	18.6	0.0	1.7	1	1	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|332796785|ref|YP_004458285.1|	-	0.0013	19.0	0.1	0.0048	17.2	0.0	2.0	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
SpoIISA_toxin	PF14171.1	gi|332796785|ref|YP_004458285.1|	-	0.0095	15.2	0.1	0.025	13.8	0.1	1.6	1	1	0	1	1	1	1	Toxin	SpoIISA,	type	II	toxin-antitoxin	system
NAD_binding_7	PF13241.1	gi|332796785|ref|YP_004458285.1|	-	0.015	15.5	0.0	0.037	14.2	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
F420_oxidored	PF03807.12	gi|332796785|ref|YP_004458285.1|	-	0.019	15.3	0.0	0.058	13.8	0.0	1.9	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|332796785|ref|YP_004458285.1|	-	0.021	13.9	0.3	0.058	12.5	0.0	1.8	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.17	gi|332796785|ref|YP_004458285.1|	-	0.026	13.3	0.0	0.048	12.5	0.0	1.4	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332796785|ref|YP_004458285.1|	-	0.037	14.0	0.1	0.085	12.9	0.1	1.6	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|332796785|ref|YP_004458285.1|	-	0.048	13.5	0.0	0.089	12.6	0.0	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_3	PF03447.11	gi|332796785|ref|YP_004458285.1|	-	0.11	12.9	0.0	0.23	11.8	0.0	1.6	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.14	gi|332796785|ref|YP_004458285.1|	-	0.13	11.2	0.0	0.18	10.8	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
DAO	PF01266.19	gi|332796785|ref|YP_004458285.1|	-	0.13	11.0	0.1	0.2	10.4	0.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
ThiF	PF00899.16	gi|332796785|ref|YP_004458285.1|	-	0.64	9.8	4.2	2.9	7.6	0.8	2.4	1	1	1	2	2	2	0	ThiF	family
Translin	PF01997.11	gi|332796786|ref|YP_004458286.1|	-	2.5e-27	95.7	0.3	3.3e-27	95.3	0.2	1.2	1	0	0	1	1	1	1	Translin	family
Acyl-CoA_ox_N	PF14749.1	gi|332796786|ref|YP_004458286.1|	-	0.0066	16.7	0.3	0.013	15.8	0.2	1.5	1	0	0	1	1	1	1	Acyl-coenzyme	A	oxidase	N-terminal
TPR_2	PF07719.12	gi|332796786|ref|YP_004458286.1|	-	0.012	15.4	3.4	0.15	12.0	0.3	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Exonuc_VII_S	PF02609.11	gi|332796786|ref|YP_004458286.1|	-	0.021	14.5	0.5	0.021	14.5	0.4	2.3	3	0	0	3	3	3	0	Exonuclease	VII	small	subunit
TPR_11	PF13414.1	gi|332796786|ref|YP_004458286.1|	-	0.025	14.2	0.7	0.48	10.1	0.0	2.3	2	0	0	2	2	2	0	TPR	repeat
TPR_12	PF13424.1	gi|332796786|ref|YP_004458286.1|	-	0.043	13.7	0.2	2.6	8.0	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DUF2183	PF09949.4	gi|332796786|ref|YP_004458286.1|	-	0.13	12.1	0.0	4	7.4	0.0	2.3	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2183)
TPR_8	PF13181.1	gi|332796786|ref|YP_004458286.1|	-	0.45	10.4	2.6	6	6.8	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|332796786|ref|YP_004458286.1|	-	1.5	8.5	4.6	4.7	6.9	0.4	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
RimK	PF08443.6	gi|332796787|ref|YP_004458287.1|	-	2.2e-43	147.9	0.0	2.8e-43	147.6	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|332796787|ref|YP_004458287.1|	-	3.3e-08	32.8	0.0	5.3e-08	32.2	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332796787|ref|YP_004458287.1|	-	6e-08	31.8	0.0	8.1e-08	31.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|332796787|ref|YP_004458287.1|	-	1.1e-07	31.8	0.0	1.6e-07	31.3	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|332796787|ref|YP_004458287.1|	-	1.6e-07	31.2	0.0	2.4e-07	30.6	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|332796787|ref|YP_004458287.1|	-	0.028	13.7	0.0	0.05	12.8	0.0	1.7	1	1	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D2	PF02786.12	gi|332796788|ref|YP_004458288.1|	-	3.1e-97	323.9	0.0	3.2e-67	225.8	0.0	2.5	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|332796788|ref|YP_004458288.1|	-	1.5e-38	131.2	0.8	4.1e-38	129.9	0.6	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|332796788|ref|YP_004458288.1|	-	1.5e-35	121.6	0.0	2.4e-21	75.8	0.0	2.7	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|332796788|ref|YP_004458288.1|	-	6.3e-30	104.2	0.0	1.2e-15	57.6	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332796788|ref|YP_004458288.1|	-	9e-26	90.3	0.0	6.6e-15	54.6	0.0	3.9	3	1	0	3	3	3	3	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|332796788|ref|YP_004458288.1|	-	2.3e-18	66.1	0.0	2.5e-10	39.9	0.0	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|332796788|ref|YP_004458288.1|	-	3.8e-16	59.0	0.3	1.1e-06	28.1	0.0	3.4	3	0	0	3	3	3	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|332796788|ref|YP_004458288.1|	-	6.3e-10	39.1	0.2	1.8e-05	24.6	0.0	2.8	2	1	0	2	2	2	2	ATP-grasp	domain
RimK	PF08443.6	gi|332796788|ref|YP_004458288.1|	-	7.9e-10	38.5	0.1	3.3e-07	29.9	0.0	2.7	2	0	0	2	2	2	2	RimK-like	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|332796788|ref|YP_004458288.1|	-	6.6e-05	22.2	0.0	0.014	14.6	0.0	2.7	2	0	0	2	2	2	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|332796788|ref|YP_004458288.1|	-	0.00011	21.8	0.0	0.038	13.5	0.0	3.1	2	1	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_2	PF08442.5	gi|332796788|ref|YP_004458288.1|	-	0.019	14.3	0.0	0.17	11.2	0.0	2.5	2	0	0	2	2	2	0	ATP-grasp	domain
MGS	PF02142.17	gi|332796788|ref|YP_004458288.1|	-	0.021	14.7	0.5	0.33	10.9	0.1	3.0	3	0	0	3	3	3	0	MGS-like	domain
CPSase_sm_chain	PF00988.17	gi|332796789|ref|YP_004458289.1|	-	7.9e-49	164.4	0.0	1.2e-48	163.9	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|332796789|ref|YP_004458289.1|	-	3.1e-41	140.9	0.0	4.7e-41	140.3	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|332796789|ref|YP_004458289.1|	-	1.9e-08	34.0	0.2	2.3e-06	27.1	0.2	2.2	1	1	0	1	1	1	1	Peptidase	C26
Lyase_1	PF00206.15	gi|332796790|ref|YP_004458290.1|	-	1.8e-43	148.9	0.2	2.8e-43	148.2	0.0	1.4	2	0	0	2	2	2	1	Lyase
ASL_C2	PF14698.1	gi|332796790|ref|YP_004458290.1|	-	0.026	14.5	0.0	0.14	12.2	0.0	2.4	2	1	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
DUF1048	PF06304.6	gi|332796790|ref|YP_004458290.1|	-	0.087	13.1	0.6	2.8	8.2	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1048)
Arginosuc_synth	PF00764.14	gi|332796791|ref|YP_004458291.1|	-	6.9e-147	489.5	0.1	8e-147	489.3	0.1	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.8	gi|332796791|ref|YP_004458291.1|	-	0.00015	21.1	0.1	0.00076	18.8	0.0	2.0	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|332796791|ref|YP_004458291.1|	-	0.0091	15.5	0.0	0.014	14.9	0.0	1.3	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.11	gi|332796791|ref|YP_004458291.1|	-	0.084	11.4	0.0	0.13	10.7	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyl	transferase
VirK	PF06903.7	gi|332796791|ref|YP_004458291.1|	-	0.13	12.0	0.0	0.26	11.0	0.0	1.4	1	0	0	1	1	1	0	VirK	protein
DUF3505	PF12013.3	gi|332796792|ref|YP_004458292.1|	-	0.00061	20.0	0.2	0.00097	19.3	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3505)
PapB	PF03333.8	gi|332796792|ref|YP_004458292.1|	-	0.008	15.9	0.0	0.014	15.1	0.0	1.5	1	0	0	1	1	1	1	Adhesin	biosynthesis	transcription	regulatory	protein
AIRS_C	PF02769.17	gi|332796793|ref|YP_004458293.1|	-	1.7e-24	86.5	0.0	5.8e-24	84.8	0.0	1.7	2	0	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|332796793|ref|YP_004458293.1|	-	7.5e-14	51.7	0.3	1.5e-13	50.7	0.2	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
GARS_A	PF01071.14	gi|332796794|ref|YP_004458294.1|	-	8.6e-40	136.3	0.0	1.5e-39	135.6	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.10	gi|332796794|ref|YP_004458294.1|	-	2.3e-19	69.6	0.0	5.1e-19	68.5	0.0	1.6	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.11	gi|332796794|ref|YP_004458294.1|	-	2.8e-11	43.4	0.0	5.5e-11	42.4	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.1	gi|332796794|ref|YP_004458294.1|	-	3.8e-09	36.5	0.0	6.4e-09	35.8	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332796794|ref|YP_004458294.1|	-	6.5e-05	21.8	0.0	0.00013	20.8	0.0	1.4	2	0	0	2	2	2	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|332796794|ref|YP_004458294.1|	-	0.005	16.1	0.0	0.0083	15.4	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
DUF448	PF04296.8	gi|332796794|ref|YP_004458294.1|	-	0.15	11.6	0.1	0.5	10.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF448)
Pribosyltran	PF00156.22	gi|332796795|ref|YP_004458295.1|	-	1.5e-17	63.5	0.2	4.1e-17	62.0	0.1	1.7	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_7	PF13537.1	gi|332796795|ref|YP_004458295.1|	-	0.0013	18.4	0.0	0.0021	17.7	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
PRTase_2	PF15609.1	gi|332796795|ref|YP_004458295.1|	-	0.0043	16.3	0.0	0.0087	15.3	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase
GATase_2	PF00310.16	gi|332796796|ref|YP_004458296.1|	-	1.2e-18	66.9	0.1	6.9e-08	31.5	0.0	3.2	1	1	2	3	3	3	3	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|332796796|ref|YP_004458296.1|	-	2.1e-15	56.5	0.0	7.3e-15	54.8	0.0	1.8	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|332796796|ref|YP_004458296.1|	-	4.6e-15	55.7	0.0	8.2e-15	54.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.22	gi|332796796|ref|YP_004458296.1|	-	5e-15	55.3	0.4	1.2e-14	54.1	0.3	1.6	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_4	PF13230.1	gi|332796796|ref|YP_004458296.1|	-	0.0002	20.1	0.0	0.00031	19.5	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
PRTase_2	PF15609.1	gi|332796796|ref|YP_004458296.1|	-	0.097	11.9	0.0	0.25	10.6	0.0	1.6	1	1	0	1	1	1	0	Phosphoribosyl	transferase
AIRS_C	PF02769.17	gi|332796797|ref|YP_004458297.1|	-	2.2e-40	138.1	1.2	1.6e-26	93.1	0.3	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|332796797|ref|YP_004458297.1|	-	4.9e-36	122.8	0.5	3e-24	85.0	0.1	2.5	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
GATase_5	PF13507.1	gi|332796798|ref|YP_004458298.1|	-	5.9e-46	156.4	0.0	7.5e-46	156.1	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_3	PF07685.9	gi|332796798|ref|YP_004458298.1|	-	3.6e-11	42.8	0.0	1.3e-09	37.7	0.0	2.4	2	1	1	3	3	3	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.19	gi|332796798|ref|YP_004458298.1|	-	1.2e-09	37.7	0.0	1.7e-09	37.2	0.0	1.4	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase	PF00117.23	gi|332796798|ref|YP_004458298.1|	-	7.6e-08	32.0	0.0	1.3e-07	31.2	0.0	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DUF4066	PF13278.1	gi|332796798|ref|YP_004458298.1|	-	2.7e-07	30.0	0.0	3.9e-07	29.4	0.0	1.2	1	0	0	1	1	1	1	Putative	amidotransferase
SNO	PF01174.14	gi|332796798|ref|YP_004458298.1|	-	9.7e-05	22.0	0.0	0.0002	21.0	0.0	1.5	2	0	0	2	2	2	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.8	gi|332796798|ref|YP_004458298.1|	-	0.061	12.7	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	Peptidase	C26
SAICAR_synt	PF01259.13	gi|332796799|ref|YP_004458299.1|	-	1.5e-51	174.8	0.6	1.7e-51	174.7	0.4	1.0	1	0	0	1	1	1	1	SAICAR	synthetase
tRNA_bind	PF01588.15	gi|332796800|ref|YP_004458300.1|	-	3.7e-28	97.2	0.1	4.3e-28	97.0	0.0	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
MMR_HSR1	PF01926.18	gi|332796801|ref|YP_004458301.1|	-	7.7e-22	77.4	0.9	1.9e-21	76.1	0.1	2.0	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|332796801|ref|YP_004458301.1|	-	8.1e-21	73.9	0.3	1.3e-20	73.2	0.2	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
NOG1	PF06858.9	gi|332796801|ref|YP_004458301.1|	-	1e-17	63.7	0.5	2.9e-17	62.2	0.3	1.8	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
Ras	PF00071.17	gi|332796801|ref|YP_004458301.1|	-	2.1e-10	40.2	0.2	7e-10	38.5	0.0	1.9	2	0	0	2	2	2	1	Ras	family
GTP_EFTU	PF00009.22	gi|332796801|ref|YP_004458301.1|	-	4.4e-06	26.2	3.2	0.00067	19.1	1.0	3.1	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|332796801|ref|YP_004458301.1|	-	9.4e-06	26.1	0.3	2.7e-05	24.6	0.0	2.0	2	0	0	2	2	2	1	Miro-like	protein
PduV-EutP	PF10662.4	gi|332796801|ref|YP_004458301.1|	-	2.2e-05	23.9	0.4	5e-05	22.8	0.1	1.8	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
Arf	PF00025.16	gi|332796801|ref|YP_004458301.1|	-	2.4e-05	23.6	0.1	5.1e-05	22.5	0.1	1.5	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
AIG1	PF04548.11	gi|332796801|ref|YP_004458301.1|	-	3.1e-05	23.1	2.6	7.4e-05	21.9	0.5	2.4	2	1	1	3	3	3	1	AIG1	family
DUF258	PF03193.11	gi|332796801|ref|YP_004458301.1|	-	0.00053	19.2	1.3	0.024	13.8	0.1	2.9	2	1	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|332796801|ref|YP_004458301.1|	-	0.00076	20.2	0.3	0.0047	17.7	0.0	2.5	2	2	0	2	2	2	1	AAA	domain
SRPRB	PF09439.5	gi|332796801|ref|YP_004458301.1|	-	0.0015	17.7	0.2	0.0028	16.8	0.1	1.5	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
MobB	PF03205.9	gi|332796801|ref|YP_004458301.1|	-	0.0035	17.0	0.1	0.008	15.8	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|332796801|ref|YP_004458301.1|	-	0.0056	16.4	1.2	0.026	14.2	0.0	2.3	1	1	0	2	2	2	1	NTPase
Dynamin_N	PF00350.18	gi|332796801|ref|YP_004458301.1|	-	0.0092	15.8	2.7	0.03	14.1	1.5	2.2	1	1	0	1	1	1	1	Dynamin	family
ATP_bind_1	PF03029.12	gi|332796801|ref|YP_004458301.1|	-	0.011	15.3	0.1	2.3	7.6	0.1	2.6	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|332796801|ref|YP_004458301.1|	-	0.019	14.6	5.6	0.78	9.3	0.0	3.2	1	1	2	3	3	3	0	Archaeal	ATPase
KTI12	PF08433.5	gi|332796801|ref|YP_004458301.1|	-	0.023	13.8	0.0	0.052	12.7	0.0	1.7	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_25	PF13481.1	gi|332796801|ref|YP_004458301.1|	-	0.051	12.9	0.0	0.14	11.5	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|332796801|ref|YP_004458301.1|	-	0.059	13.6	4.2	0.4	10.9	1.7	2.9	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|332796801|ref|YP_004458301.1|	-	0.068	13.3	0.2	0.23	11.6	0.0	2.1	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ArgK	PF03308.11	gi|332796801|ref|YP_004458301.1|	-	0.094	11.4	0.3	0.86	8.3	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
AAA_29	PF13555.1	gi|332796801|ref|YP_004458301.1|	-	0.14	11.7	0.1	0.28	10.7	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|332796801|ref|YP_004458301.1|	-	0.22	11.4	3.4	0.46	10.3	0.7	2.6	2	1	0	2	2	2	0	AAA	domain
TYW3	PF02676.9	gi|332796802|ref|YP_004458302.1|	-	3.1e-46	157.0	0.1	3.6e-46	156.8	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
DsrC	PF04358.8	gi|332796802|ref|YP_004458302.1|	-	0.14	12.3	0.8	2.4	8.4	0.2	2.7	2	1	0	2	2	2	0	DsrC	like	protein
PP1	PF07430.6	gi|332796803|ref|YP_004458303.1|	-	0.0045	16.6	0.1	0.006	16.2	0.1	1.2	1	0	0	1	1	1	1	Phloem	filament	protein	PP1
Pyr_redox_2	PF07992.9	gi|332796804|ref|YP_004458304.1|	-	1.8e-37	129.1	9.5	8e-37	127.0	4.4	3.8	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|332796804|ref|YP_004458304.1|	-	1.7e-26	92.3	0.0	3.6e-26	91.3	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|332796804|ref|YP_004458304.1|	-	1.6e-22	79.6	12.7	6e-20	71.4	0.1	3.3	4	0	0	4	4	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332796804|ref|YP_004458304.1|	-	4.3e-11	43.2	0.1	3.7e-09	36.9	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|332796804|ref|YP_004458304.1|	-	9.7e-11	41.1	8.3	4.2e-08	32.4	1.8	2.6	2	0	0	2	2	2	2	FAD	binding	domain
GIDA	PF01134.17	gi|332796804|ref|YP_004458304.1|	-	5e-10	38.7	19.6	1.9e-07	30.3	5.2	4.3	3	2	1	4	4	4	2	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|332796804|ref|YP_004458304.1|	-	1e-09	37.7	14.2	6.3e-07	28.6	1.8	3.9	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|332796804|ref|YP_004458304.1|	-	4.4e-09	35.2	13.3	0.00028	19.4	0.8	4.1	3	1	1	4	4	4	3	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|332796804|ref|YP_004458304.1|	-	1.1e-08	34.9	3.4	0.00045	20.1	1.1	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|332796804|ref|YP_004458304.1|	-	1.5e-08	34.1	4.5	1.4e-07	30.9	0.6	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|332796804|ref|YP_004458304.1|	-	1e-07	31.6	0.8	0.00046	19.7	0.0	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.14	gi|332796804|ref|YP_004458304.1|	-	2.4e-07	30.1	0.7	0.013	14.5	0.1	2.3	2	0	0	2	2	2	2	FAD	binding	domain
3HCDH_N	PF02737.13	gi|332796804|ref|YP_004458304.1|	-	2.9e-05	23.8	4.7	0.0094	15.6	0.0	2.8	3	0	0	3	3	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|332796804|ref|YP_004458304.1|	-	6.5e-05	22.1	0.6	0.0091	15.1	0.2	2.7	2	0	0	2	2	2	1	Thi4	family
Lycopene_cycl	PF05834.7	gi|332796804|ref|YP_004458304.1|	-	0.00017	20.6	1.4	0.084	11.7	0.0	2.5	2	1	0	2	2	2	2	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|332796804|ref|YP_004458304.1|	-	0.00022	20.0	6.2	0.0057	15.3	0.2	2.7	3	0	0	3	3	3	2	Tryptophan	halogenase
NAD_binding_7	PF13241.1	gi|332796804|ref|YP_004458304.1|	-	0.00049	20.3	1.6	0.86	9.8	0.4	2.5	2	1	0	2	2	2	2	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|332796804|ref|YP_004458304.1|	-	0.0011	18.9	2.0	1.7	8.6	0.0	2.9	2	0	0	2	2	2	2	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.18	gi|332796804|ref|YP_004458304.1|	-	0.012	15.4	0.1	1.9	8.1	0.0	2.4	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
K_oxygenase	PF13434.1	gi|332796804|ref|YP_004458304.1|	-	0.083	11.7	0.0	0.16	10.8	0.0	1.5	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
XdhC_C	PF13478.1	gi|332796804|ref|YP_004458304.1|	-	0.11	12.8	0.0	1.5	9.1	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
F420_oxidored	PF03807.12	gi|332796804|ref|YP_004458304.1|	-	1.7	9.0	5.1	11	6.5	0.0	3.4	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.9	gi|332796804|ref|YP_004458304.1|	-	6	6.2	7.8	2.2	7.6	0.6	2.8	2	2	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
HTH_5	PF01022.15	gi|332796805|ref|YP_004458305.1|	-	2.4e-09	36.6	0.8	4e-09	35.9	0.6	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|332796805|ref|YP_004458305.1|	-	2.6e-06	27.1	0.1	9.1e-06	25.3	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|332796805|ref|YP_004458305.1|	-	0.0015	18.1	0.0	0.0036	16.9	0.0	1.7	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|332796805|ref|YP_004458305.1|	-	0.0067	16.2	0.4	0.0099	15.6	0.3	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|332796805|ref|YP_004458305.1|	-	0.0076	15.6	2.6	0.034	13.5	1.3	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|332796805|ref|YP_004458305.1|	-	0.02	14.9	0.1	0.031	14.3	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Phage_rep_O	PF04492.8	gi|332796805|ref|YP_004458305.1|	-	0.026	14.7	0.0	0.036	14.2	0.0	1.2	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
B-block_TFIIIC	PF04182.7	gi|332796805|ref|YP_004458305.1|	-	0.041	13.7	0.1	0.074	12.9	0.1	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_11	PF08279.7	gi|332796805|ref|YP_004458305.1|	-	0.084	12.5	0.6	0.16	11.6	0.4	1.5	1	0	0	1	1	1	0	HTH	domain
DUF837	PF05769.6	gi|332796806|ref|YP_004458306.1|	-	0.0019	17.7	2.7	0.058	12.9	1.0	2.4	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF837)
Cas6	PF09559.5	gi|332796806|ref|YP_004458306.1|	-	0.043	13.5	0.3	0.061	13.0	0.2	1.2	1	0	0	1	1	1	0	Cas6	Crispr
DivIVA	PF05103.8	gi|332796806|ref|YP_004458306.1|	-	0.057	13.4	1.3	2.1	8.4	0.0	2.2	2	0	0	2	2	2	0	DivIVA	protein
PhoU	PF01895.14	gi|332796807|ref|YP_004458307.1|	-	1.9e-29	101.9	12.7	1.8e-18	66.7	2.9	2.4	2	0	0	2	2	2	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|332796807|ref|YP_004458307.1|	-	2.6e-11	42.9	0.1	6.2e-11	41.7	0.0	1.7	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
ThiF	PF00899.16	gi|332796807|ref|YP_004458307.1|	-	0.062	13.1	0.8	1.7	8.4	0.0	2.9	2	1	1	3	3	3	0	ThiF	family
MAAL_N	PF05034.8	gi|332796807|ref|YP_004458307.1|	-	0.14	11.8	0.3	0.44	10.2	0.1	1.9	2	0	0	2	2	2	0	Methylaspartate	ammonia-lyase	N-terminus
Prok-JAB	PF14464.1	gi|332796808|ref|YP_004458308.1|	-	0.022	14.3	0.0	0.032	13.7	0.0	1.3	1	0	0	1	1	1	0	Prokaryotic	homologs	of	the	JAB	domain
OMPdecase	PF00215.19	gi|332796809|ref|YP_004458309.1|	-	6.6e-24	84.5	0.0	1e-23	83.9	0.0	1.2	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Dot_icm_IcmQ	PF09475.5	gi|332796809|ref|YP_004458309.1|	-	0.068	12.3	0.1	0.13	11.5	0.1	1.4	1	0	0	1	1	1	0	Dot/Icm	secretion	system	protein	(dot_icm_IcmQ)
Pribosyltran	PF00156.22	gi|332796810|ref|YP_004458310.1|	-	2e-18	66.3	0.5	4.3e-18	65.2	0.3	1.6	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|332796810|ref|YP_004458310.1|	-	0.039	13.1	0.0	0.054	12.6	0.0	1.2	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
OTCace_N	PF02729.16	gi|332796811|ref|YP_004458311.1|	-	1.1e-39	135.3	0.0	1.6e-39	134.8	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|332796811|ref|YP_004458311.1|	-	5.6e-33	114.0	0.0	1.2e-32	112.9	0.0	1.5	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
PyrI	PF01948.13	gi|332796812|ref|YP_004458312.1|	-	1e-38	131.2	3.4	1.4e-38	130.7	2.3	1.2	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|332796812|ref|YP_004458312.1|	-	9.3e-20	69.8	0.8	1.5e-19	69.1	0.5	1.3	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
DHODB_Fe-S_bind	PF10418.4	gi|332796813|ref|YP_004458313.1|	-	0.00081	18.8	3.9	0.00081	18.8	2.7	1.8	2	0	0	2	2	2	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
zinc_ribbon_6	PF14599.1	gi|332796813|ref|YP_004458313.1|	-	0.31	10.8	1.7	0.61	9.9	0.0	2.2	3	0	0	3	3	3	0	Zinc-ribbon
Amidohydro_1	PF01979.15	gi|332796814|ref|YP_004458314.1|	-	1.3e-13	51.3	0.1	1.1e-07	31.7	0.0	2.1	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|332796814|ref|YP_004458314.1|	-	1.9e-10	41.2	0.0	5.7e-08	33.1	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|332796814|ref|YP_004458314.1|	-	0.00053	19.3	0.0	0.0011	18.2	0.0	1.6	1	1	0	1	1	1	1	Amidohydrolase	family
PAGK	PF15284.1	gi|332796814|ref|YP_004458314.1|	-	0.12	12.1	0.0	0.25	11.1	0.0	1.4	1	0	0	1	1	1	0	Phage-encoded	virulence	factor
DHO_dh	PF01180.16	gi|332796815|ref|YP_004458315.1|	-	1.4e-43	148.9	0.7	1.7e-43	148.6	0.5	1.1	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.12	gi|332796815|ref|YP_004458315.1|	-	3.9e-06	25.9	0.1	6.3e-06	25.2	0.0	1.2	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
Carmo_coat_C	PF08462.5	gi|332796816|ref|YP_004458316.1|	-	0.12	12.2	0.1	0.15	11.9	0.0	1.1	1	0	0	1	1	1	0	Carmovirus	coat	protein
Lbh	PF15317.1	gi|332796816|ref|YP_004458316.1|	-	0.14	12.4	1.0	0.18	12.1	0.0	1.6	2	0	0	2	2	2	0	Cardiac	transcription	factor	regulator,	Developmental	protein
DUF2115	PF09888.4	gi|332796817|ref|YP_004458317.1|	-	0.021	14.8	2.6	0.026	14.6	1.8	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
HSP33	PF01430.14	gi|332796817|ref|YP_004458317.1|	-	0.062	12.4	2.3	0.073	12.1	1.6	1.1	1	0	0	1	1	1	0	Hsp33	protein
Reo_sigmaC	PF04582.7	gi|332796817|ref|YP_004458317.1|	-	0.063	12.4	0.4	0.078	12.1	0.3	1.1	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
DUF4446	PF14584.1	gi|332796817|ref|YP_004458317.1|	-	0.085	12.6	1.3	0.17	11.7	0.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Laminin_II	PF06009.7	gi|332796817|ref|YP_004458317.1|	-	0.091	12.5	1.9	0.15	11.8	1.1	1.5	1	1	0	1	1	1	0	Laminin	Domain	II
MCC-bdg_PDZ	PF10506.4	gi|332796817|ref|YP_004458317.1|	-	0.11	12.3	1.1	0.23	11.3	0.8	1.6	1	0	0	1	1	1	0	PDZ	domain	of	MCC-2	bdg	protein	for	Usher	syndrome
Fmp27_WPPW	PF10359.4	gi|332796817|ref|YP_004458317.1|	-	0.18	10.2	5.2	0.18	10.2	3.6	1.1	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
APG6	PF04111.7	gi|332796817|ref|YP_004458317.1|	-	0.23	10.4	7.2	0.25	10.3	5.0	1.2	1	0	0	1	1	1	0	Autophagy	protein	Apg6
RPN7	PF10602.4	gi|332796817|ref|YP_004458317.1|	-	0.24	10.7	2.4	0.29	10.4	1.7	1.1	1	0	0	1	1	1	0	26S	proteasome	subunit	RPN7
PNPase	PF03726.9	gi|332796817|ref|YP_004458317.1|	-	0.34	11.2	5.3	10	6.4	0.7	2.9	1	1	2	3	3	3	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
5_nucleotid	PF05761.9	gi|332796817|ref|YP_004458317.1|	-	0.44	8.9	4.1	0.49	8.8	2.9	1.1	1	0	0	1	1	1	0	5'	nucleotidase	family
DUF1664	PF07889.7	gi|332796817|ref|YP_004458317.1|	-	0.54	10.0	4.8	0.28	11.0	1.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
ERp29	PF07749.7	gi|332796817|ref|YP_004458317.1|	-	0.56	10.8	2.9	0.88	10.2	2.0	1.4	1	1	0	1	1	1	0	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
FlaC_arch	PF05377.6	gi|332796817|ref|YP_004458317.1|	-	0.71	9.8	7.1	0.28	11.1	0.5	2.8	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
DUF4208	PF13907.1	gi|332796817|ref|YP_004458317.1|	-	0.9	9.7	6.2	0.67	10.2	1.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4208)
V_ATPase_I	PF01496.14	gi|332796817|ref|YP_004458317.1|	-	1.1	6.9	5.6	1.2	6.9	3.9	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Prefoldin_2	PF01920.15	gi|332796817|ref|YP_004458317.1|	-	1.2	8.9	10.8	0.92	9.3	3.0	2.6	1	1	1	2	2	2	0	Prefoldin	subunit
Med9	PF07544.8	gi|332796817|ref|YP_004458317.1|	-	2.1	8.1	7.5	3.4	7.4	0.8	2.6	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
IncA	PF04156.9	gi|332796817|ref|YP_004458317.1|	-	2.3	7.7	9.5	3.3	7.2	6.6	1.3	1	0	0	1	1	1	0	IncA	protein
DUF904	PF06005.7	gi|332796817|ref|YP_004458317.1|	-	3.3	8.0	12.2	1.3	9.3	1.7	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
Exonuc_VII_S	PF02609.11	gi|332796817|ref|YP_004458317.1|	-	8.4	6.2	10.5	6.2	6.6	0.8	3.2	3	0	0	3	3	3	0	Exonuclease	VII	small	subunit
MarC	PF01914.12	gi|332796818|ref|YP_004458318.1|	-	4.3e-31	107.6	15.6	5.2e-31	107.3	10.8	1.1	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
DUF2976	PF11190.3	gi|332796818|ref|YP_004458318.1|	-	0.031	13.8	0.8	0.031	13.8	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
AsnC_trans_reg	PF01037.16	gi|332796819|ref|YP_004458319.1|	-	1.1e-18	66.7	0.6	1.6e-18	66.1	0.4	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|332796819|ref|YP_004458319.1|	-	2e-12	46.3	3.3	3.1e-12	45.6	0.9	2.3	3	0	0	3	3	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|332796819|ref|YP_004458319.1|	-	3.9e-10	39.1	3.7	7.3e-10	38.2	2.6	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
MarR_2	PF12802.2	gi|332796819|ref|YP_004458319.1|	-	2.6e-06	27.0	0.1	4.4e-06	26.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_23	PF13384.1	gi|332796819|ref|YP_004458319.1|	-	2.2e-05	23.9	0.0	4.1e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_11	PF08279.7	gi|332796819|ref|YP_004458319.1|	-	0.00013	21.5	0.2	0.00024	20.6	0.1	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_27	PF13463.1	gi|332796819|ref|YP_004458319.1|	-	0.0012	19.1	0.3	0.0058	16.9	0.1	2.2	2	1	1	3	3	3	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|332796819|ref|YP_004458319.1|	-	0.0038	16.8	0.0	0.0098	15.5	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|332796819|ref|YP_004458319.1|	-	0.0045	16.8	0.0	0.012	15.5	0.0	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|332796819|ref|YP_004458319.1|	-	0.0068	15.9	0.4	0.011	15.2	0.3	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|332796819|ref|YP_004458319.1|	-	0.008	15.9	0.4	0.014	15.1	0.3	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|332796819|ref|YP_004458319.1|	-	0.0081	15.8	0.1	0.017	14.7	0.1	1.6	1	0	0	1	1	1	1	MarR	family
Dabb	PF07876.7	gi|332796819|ref|YP_004458319.1|	-	0.0087	16.4	0.0	0.023	15.1	0.0	1.8	2	0	0	2	2	2	1	Stress	responsive	A/B	Barrel	Domain
HTH_10	PF04967.7	gi|332796819|ref|YP_004458319.1|	-	0.0095	15.4	0.0	0.018	14.6	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
GntR	PF00392.16	gi|332796819|ref|YP_004458319.1|	-	0.01	15.2	0.1	0.017	14.5	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_5	PF01022.15	gi|332796819|ref|YP_004458319.1|	-	0.013	15.1	0.3	0.026	14.1	0.2	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
TetR_C_9	PF14514.1	gi|332796819|ref|YP_004458319.1|	-	0.013	15.3	0.0	0.022	14.5	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator,	TetR,	C-terminal
Clp_N	PF02861.15	gi|332796819|ref|YP_004458319.1|	-	0.019	14.8	0.1	0.038	13.9	0.0	1.5	1	0	0	1	1	1	0	Clp	amino	terminal	domain
Rrf2	PF02082.15	gi|332796819|ref|YP_004458319.1|	-	0.02	15.0	0.0	0.048	13.7	0.0	1.6	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_28	PF13518.1	gi|332796819|ref|YP_004458319.1|	-	0.021	14.8	0.0	0.033	14.1	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF4250	PF14056.1	gi|332796819|ref|YP_004458319.1|	-	0.021	14.5	0.2	0.053	13.2	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4250)
HTH_38	PF13936.1	gi|332796819|ref|YP_004458319.1|	-	0.021	14.3	0.3	0.052	13.1	0.2	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|332796819|ref|YP_004458319.1|	-	0.037	13.9	0.1	0.081	12.8	0.1	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_30	PF13556.1	gi|332796819|ref|YP_004458319.1|	-	0.041	13.4	0.1	0.071	12.7	0.1	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_8	PF02954.14	gi|332796819|ref|YP_004458319.1|	-	0.084	12.4	0.2	0.16	11.5	0.1	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_Tnp_ISL3	PF13542.1	gi|332796819|ref|YP_004458319.1|	-	0.089	11.9	0.1	0.16	11.1	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_DeoR	PF08220.7	gi|332796819|ref|YP_004458319.1|	-	0.092	12.2	0.1	0.23	11.0	0.1	1.6	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_9	PF08221.6	gi|332796819|ref|YP_004458319.1|	-	0.11	12.3	0.1	0.25	11.2	0.1	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
RNA_POL_M_15KD	PF02150.11	gi|332796820|ref|YP_004458320.1|	-	2.2e-09	36.8	1.2	4.5e-09	35.8	0.9	1.6	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
zf-TFIIB	PF13453.1	gi|332796820|ref|YP_004458320.1|	-	0.00019	20.5	0.9	0.00031	19.8	0.6	1.4	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
DUF2387	PF09526.5	gi|332796820|ref|YP_004458320.1|	-	0.00019	21.2	3.9	0.00032	20.5	2.7	1.5	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zf-NADH-PPase	PF09297.6	gi|332796820|ref|YP_004458320.1|	-	0.00026	20.4	1.0	0.0011	18.4	0.7	2.0	1	1	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|332796820|ref|YP_004458320.1|	-	0.002	17.8	0.4	0.0044	16.8	0.3	1.5	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
IBR	PF01485.16	gi|332796820|ref|YP_004458320.1|	-	0.0029	17.4	0.1	0.0048	16.7	0.1	1.4	1	0	0	1	1	1	1	IBR	domain
DZR	PF12773.2	gi|332796820|ref|YP_004458320.1|	-	0.0032	17.2	0.7	0.0054	16.5	0.5	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
Elf1	PF05129.8	gi|332796820|ref|YP_004458320.1|	-	0.0046	16.6	1.0	0.0086	15.7	0.7	1.5	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Phage_GP20	PF06810.6	gi|332796820|ref|YP_004458320.1|	-	0.0052	16.2	3.5	0.0057	16.0	2.4	1.1	1	0	0	1	1	1	1	Phage	minor	structural	protein	GP20
OrfB_Zn_ribbon	PF07282.6	gi|332796820|ref|YP_004458320.1|	-	0.0061	16.1	3.6	0.008	15.8	0.9	1.9	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
A2L_zn_ribbon	PF08792.5	gi|332796820|ref|YP_004458320.1|	-	0.016	14.6	4.7	0.17	11.3	2.7	2.4	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
UPF0547	PF10571.4	gi|332796820|ref|YP_004458320.1|	-	0.022	14.4	2.3	0.54	10.0	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-IS66	PF13005.2	gi|332796820|ref|YP_004458320.1|	-	0.056	13.4	1.0	0.056	13.4	0.7	2.1	1	1	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
Lar_restr_allev	PF14354.1	gi|332796820|ref|YP_004458320.1|	-	0.07	13.4	1.4	0.2	11.9	1.0	1.7	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Cys_rich_CPCC	PF14206.1	gi|332796820|ref|YP_004458320.1|	-	0.089	12.3	0.2	0.16	11.5	0.2	1.5	1	0	0	1	1	1	0	Cysteine-rich	CPCC
zf-ribbon_3	PF13248.1	gi|332796820|ref|YP_004458320.1|	-	0.11	11.7	6.6	0.48	9.7	4.6	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
C1_1	PF00130.17	gi|332796820|ref|YP_004458320.1|	-	0.11	12.2	1.0	0.17	11.6	0.7	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
FlhC	PF05280.6	gi|332796820|ref|YP_004458320.1|	-	0.12	11.8	0.2	0.16	11.4	0.1	1.2	1	0	0	1	1	1	0	Flagellar	transcriptional	activator	(FlhC)
zf-C4_Topoisom	PF01396.14	gi|332796820|ref|YP_004458320.1|	-	0.15	11.5	4.8	0.42	10.1	0.3	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-UDP	PF14569.1	gi|332796820|ref|YP_004458320.1|	-	0.16	11.7	1.1	0.22	11.2	0.8	1.4	1	1	0	1	1	1	0	Zinc-binding	RING-finger
DNA_RNApol_7kD	PF03604.8	gi|332796820|ref|YP_004458320.1|	-	0.26	10.7	3.3	0.75	9.3	2.3	1.8	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ISL3	PF14690.1	gi|332796820|ref|YP_004458320.1|	-	0.31	11.0	5.7	0.48	10.4	0.3	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|332796820|ref|YP_004458320.1|	-	0.34	10.4	9.2	0.66	9.5	0.5	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
Ogr_Delta	PF04606.7	gi|332796820|ref|YP_004458320.1|	-	0.46	10.1	2.6	6.5	6.4	0.0	2.3	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
Nudix_N_2	PF14803.1	gi|332796820|ref|YP_004458320.1|	-	0.71	9.6	4.0	3.4	7.4	2.8	2.0	1	1	0	1	1	1	0	Nudix	N-terminal
DUF1936	PF09151.5	gi|332796820|ref|YP_004458320.1|	-	0.72	9.4	9.3	2.2	7.8	6.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1936)
Zn_ribbon_recom	PF13408.1	gi|332796820|ref|YP_004458320.1|	-	0.74	10.1	7.9	3.5	7.9	5.5	2.1	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|332796820|ref|YP_004458320.1|	-	0.93	9.3	5.9	2.4	8.0	3.7	1.9	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn-ribbon_8	PF09723.5	gi|332796820|ref|YP_004458320.1|	-	0.95	9.4	6.3	6.3	6.8	0.5	2.2	1	1	0	2	2	2	0	Zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|332796820|ref|YP_004458320.1|	-	3.8	7.3	7.6	28	4.5	5.1	2.1	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
FYDLN_acid	PF09538.5	gi|332796820|ref|YP_004458320.1|	-	3.9	8.1	10.3	12	6.5	7.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
EspA	PF03433.8	gi|332796821|ref|YP_004458321.1|	-	0.023	14.1	2.0	0.025	14.0	1.4	1.3	1	0	0	1	1	1	0	EspA-like	secreted	protein
APP_N	PF02177.11	gi|332796821|ref|YP_004458321.1|	-	0.087	12.7	4.0	0.12	12.3	2.8	1.2	1	0	0	1	1	1	0	Amyloid	A4	N-terminal	heparin-binding
U1snRNP70_N	PF12220.3	gi|332796821|ref|YP_004458321.1|	-	1.9	8.8	16.5	0.67	10.3	9.4	1.7	1	1	1	2	2	2	0	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
Radical_SAM	PF04055.16	gi|332796822|ref|YP_004458322.1|	-	5e-16	59.3	0.0	1e-15	58.3	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
tRNA-synt_2b	PF00587.20	gi|332796823|ref|YP_004458323.1|	-	3.1e-36	124.5	0.0	5.6e-36	123.7	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|332796823|ref|YP_004458323.1|	-	6.9e-21	74.2	14.9	6.9e-21	74.2	10.4	2.0	2	0	0	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
ALIX_LYPXL_bnd	PF13949.1	gi|332796823|ref|YP_004458323.1|	-	0.00083	18.4	6.1	0.0017	17.3	4.3	1.5	1	0	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
Dor1	PF04124.7	gi|332796823|ref|YP_004458323.1|	-	0.003	16.0	0.6	0.038	12.4	0.2	2.2	2	0	0	2	2	2	1	Dor1-like	family
APG6	PF04111.7	gi|332796823|ref|YP_004458323.1|	-	0.0051	15.8	12.9	0.07	12.1	6.7	2.7	3	0	0	3	3	3	1	Autophagy	protein	Apg6
DUF342	PF03961.8	gi|332796823|ref|YP_004458323.1|	-	0.0059	15.0	4.3	0.0098	14.3	3.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
LUC7	PF03194.10	gi|332796823|ref|YP_004458323.1|	-	0.084	12.3	4.8	0.17	11.4	3.3	1.4	1	0	0	1	1	1	0	LUC7	N_terminus
Allexi_40kDa	PF05549.6	gi|332796823|ref|YP_004458323.1|	-	0.22	10.7	1.1	0.4	9.9	0.7	1.3	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
AAA_23	PF13476.1	gi|332796823|ref|YP_004458323.1|	-	1.2	9.4	9.7	2.5	8.3	6.7	1.6	1	0	0	1	1	1	0	AAA	domain
OmpH	PF03938.9	gi|332796823|ref|YP_004458323.1|	-	1.2	9.0	8.4	0.31	10.9	2.6	2.2	3	0	0	3	3	3	0	Outer	membrane	protein	(OmpH-like)
IncA	PF04156.9	gi|332796823|ref|YP_004458323.1|	-	1.8	8.0	10.3	4	6.9	7.1	1.5	1	0	0	1	1	1	0	IncA	protein
Bap31	PF05529.7	gi|332796823|ref|YP_004458323.1|	-	3.5	7.0	11.6	9	5.7	5.1	2.2	2	0	0	2	2	2	0	B-cell	receptor-associated	protein	31-like
Spectrin	PF00435.16	gi|332796823|ref|YP_004458323.1|	-	4.5	7.6	11.9	7.5	6.8	5.6	2.9	2	1	1	3	3	3	0	Spectrin	repeat
DUF59	PF01883.14	gi|332796824|ref|YP_004458324.1|	-	4.3e-18	65.0	0.2	8.5e-18	64.1	0.1	1.5	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF59
PRA-CH	PF01502.13	gi|332796825|ref|YP_004458325.1|	-	1.5e-31	107.8	0.0	2e-31	107.4	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
GATase	PF00117.23	gi|332796826|ref|YP_004458326.1|	-	5.4e-28	97.7	0.0	6e-28	97.5	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.9	gi|332796826|ref|YP_004458326.1|	-	2.1e-05	24.1	0.2	5.2e-05	22.8	0.2	1.8	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
PRA-PH	PF01503.12	gi|332796827|ref|YP_004458327.1|	-	4.5e-13	49.2	0.1	5e-13	49.1	0.1	1.0	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
ETC_C1_NDUFA5	PF04716.9	gi|332796827|ref|YP_004458327.1|	-	0.028	13.9	0.2	0.047	13.2	0.1	1.6	1	1	0	1	1	1	0	ETC	complex	I	subunit	conserved	region
E1_dh	PF00676.15	gi|332796827|ref|YP_004458327.1|	-	0.086	11.5	0.0	0.092	11.4	0.0	1.0	1	0	0	1	1	1	0	Dehydrogenase	E1	component
Histidinol_dh	PF00815.15	gi|332796828|ref|YP_004458328.1|	-	6.1e-121	403.9	2.9	4.3e-120	401.1	2.0	1.8	1	1	0	1	1	1	1	Histidinol	dehydrogenase
His_biosynth	PF00977.16	gi|332796829|ref|YP_004458329.1|	-	2e-86	288.9	4.0	2.3e-86	288.7	2.7	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NMO	PF03060.10	gi|332796829|ref|YP_004458329.1|	-	9.2e-07	28.3	1.9	0.0075	15.4	0.4	2.2	1	1	1	2	2	2	2	Nitronate	monooxygenase
TMP-TENI	PF02581.12	gi|332796829|ref|YP_004458329.1|	-	1.5e-06	27.4	0.6	0.015	14.4	0.1	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
ThiG	PF05690.9	gi|332796829|ref|YP_004458329.1|	-	2.8e-06	26.5	0.6	0.0048	15.9	0.1	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.12	gi|332796829|ref|YP_004458329.1|	-	1.3e-05	24.5	1.5	3e-05	23.3	0.1	2.2	2	1	1	3	3	3	1	PcrB	family
Dus	PF01207.12	gi|332796829|ref|YP_004458329.1|	-	3.8e-05	22.6	0.0	0.013	14.3	0.0	2.3	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.16	gi|332796829|ref|YP_004458329.1|	-	5.6e-05	22.2	0.3	0.027	13.4	0.0	2.2	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
FMN_dh	PF01070.13	gi|332796829|ref|YP_004458329.1|	-	0.0043	15.9	3.1	0.067	12.0	0.1	2.8	2	1	1	3	3	3	1	FMN-dependent	dehydrogenase
SBP_bac_3	PF00497.15	gi|332796829|ref|YP_004458329.1|	-	0.021	14.0	0.0	0.041	13.1	0.0	1.4	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
Oxidored_FMN	PF00724.15	gi|332796829|ref|YP_004458329.1|	-	0.045	12.7	0.0	2.7	6.9	0.0	2.0	2	0	0	2	2	2	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
G3P_antiterm	PF04309.7	gi|332796829|ref|YP_004458329.1|	-	0.1	11.6	0.5	2.1	7.3	0.1	2.2	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
IGPD	PF00475.13	gi|332796830|ref|YP_004458330.1|	-	2.5e-54	183.0	0.9	2.6e-54	183.0	0.2	1.3	2	0	0	2	2	2	1	Imidazoleglycerol-phosphate	dehydratase
His_biosynth	PF00977.16	gi|332796831|ref|YP_004458331.1|	-	4.2e-46	157.0	2.6	4.7e-46	156.9	1.8	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|332796831|ref|YP_004458331.1|	-	3.8e-05	23.0	4.0	4.6e-05	22.7	0.3	2.2	2	1	0	2	2	2	1	PcrB	family
HisG	PF01634.13	gi|332796832|ref|YP_004458332.1|	-	1.2e-53	181.0	1.0	1.8e-53	180.4	0.7	1.3	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|332796832|ref|YP_004458332.1|	-	4.9e-21	74.4	1.4	1.4e-20	73.0	0.3	2.3	3	0	0	3	3	3	1	HisG,	C-terminal	domain
NMT1	PF09084.6	gi|332796832|ref|YP_004458332.1|	-	0.0074	15.9	0.4	0.011	15.3	0.3	1.4	1	0	0	1	1	1	1	NMT1/THI5	like
Aminotran_1_2	PF00155.16	gi|332796833|ref|YP_004458333.1|	-	5.8e-46	157.0	0.0	6.7e-46	156.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Mrr_N	PF14338.1	gi|332796834|ref|YP_004458334.1|	-	0.077	13.0	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Mrr	N-terminal	domain
tRNA-synt_1	PF00133.17	gi|332796835|ref|YP_004458335.1|	-	1.7e-50	171.6	0.0	1.4e-49	168.6	0.0	2.2	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|332796835|ref|YP_004458335.1|	-	1.8e-28	99.2	0.6	4.4e-28	97.9	0.4	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|332796835|ref|YP_004458335.1|	-	3.3e-11	42.8	0.1	8.8e-11	41.4	0.1	1.7	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1g	PF09334.6	gi|332796835|ref|YP_004458335.1|	-	1.8e-10	40.0	0.0	1.3e-08	33.9	0.0	3.0	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|332796835|ref|YP_004458335.1|	-	1.4e-07	30.9	0.0	2.8e-07	29.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
Cob_adeno_trans	PF01923.13	gi|332796836|ref|YP_004458336.1|	-	2.2e-50	170.6	0.0	2.5e-50	170.4	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
ATP_bind_3	PF01171.15	gi|332796837|ref|YP_004458337.1|	-	1.5e-10	40.8	0.0	2.8e-10	39.9	0.0	1.5	1	1	0	1	1	1	1	PP-loop	family
NAD_synthase	PF02540.12	gi|332796837|ref|YP_004458337.1|	-	0.0052	15.7	0.0	0.0088	14.9	0.0	1.4	1	0	0	1	1	1	1	NAD	synthase
TF_Zn_Ribbon	PF08271.7	gi|332796837|ref|YP_004458337.1|	-	0.025	13.8	12.5	0.26	10.6	0.7	3.4	3	0	0	3	3	3	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|332796837|ref|YP_004458337.1|	-	0.083	12.7	0.3	0.083	12.7	0.2	2.8	3	0	0	3	3	3	0	Double	zinc	ribbon
DUF2318	PF10080.4	gi|332796837|ref|YP_004458337.1|	-	1.5	8.5	5.2	7.4	6.4	0.1	2.8	3	0	0	3	3	3	0	Predicted	membrane	protein	(DUF2318)
DUF211	PF02680.9	gi|332796838|ref|YP_004458338.1|	-	3.6e-36	122.8	2.1	3.8e-36	122.7	1.5	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
AdoMet_dc	PF02675.10	gi|332796839|ref|YP_004458339.1|	-	7.7e-33	112.5	0.0	8.7e-33	112.4	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
UbiA	PF01040.13	gi|332796841|ref|YP_004458341.1|	-	8.9e-35	120.1	16.0	1.2e-34	119.7	11.1	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
UPF0697	PF15117.1	gi|332796841|ref|YP_004458341.1|	-	0.14	11.9	0.7	2.9	7.7	0.0	2.8	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0697
DUF3344	PF11824.3	gi|332796842|ref|YP_004458342.1|	-	0.016	14.5	1.8	0.034	13.5	1.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3344)
CARDB	PF07705.6	gi|332796842|ref|YP_004458342.1|	-	0.026	14.5	0.1	0.066	13.2	0.1	1.7	1	0	0	1	1	1	0	CARDB
DUF840	PF05801.6	gi|332796842|ref|YP_004458342.1|	-	0.08	13.0	1.5	0.18	11.9	1.0	1.6	1	0	0	1	1	1	0	Lagovirus	protein	of	unknown	function	(DUF840)
MMR_HSR1	PF01926.18	gi|332796843|ref|YP_004458343.1|	-	5.2e-18	65.0	0.1	5.4e-15	55.3	0.0	2.3	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|332796843|ref|YP_004458343.1|	-	1.6e-06	27.4	0.2	0.002	17.4	0.0	2.3	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|332796843|ref|YP_004458343.1|	-	6.6e-06	26.0	0.4	0.022	14.5	0.0	3.0	2	1	1	3	3	3	2	Dynamin	family
DUF258	PF03193.11	gi|332796843|ref|YP_004458343.1|	-	2.5e-05	23.5	0.0	4.1e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
GTP_EFTU	PF00009.22	gi|332796843|ref|YP_004458343.1|	-	0.00032	20.1	0.5	0.0048	16.3	0.1	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|332796843|ref|YP_004458343.1|	-	0.001	19.5	0.0	0.0098	16.3	0.0	2.2	2	0	0	2	2	2	1	Miro-like	protein
AIG1	PF04548.11	gi|332796843|ref|YP_004458343.1|	-	0.0061	15.6	0.0	0.013	14.6	0.0	1.6	2	0	0	2	2	2	1	AIG1	family
AAA_16	PF13191.1	gi|332796843|ref|YP_004458343.1|	-	0.0087	16.0	0.1	0.034	14.1	0.0	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|332796843|ref|YP_004458343.1|	-	0.017	15.9	0.4	0.083	13.7	0.1	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|332796843|ref|YP_004458343.1|	-	0.03	14.6	0.3	0.3	11.4	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
Ras	PF00071.17	gi|332796843|ref|YP_004458343.1|	-	0.036	13.4	0.1	1.8	7.9	0.0	2.2	2	0	0	2	2	2	0	Ras	family
IIGP	PF05049.8	gi|332796843|ref|YP_004458343.1|	-	0.037	12.8	0.0	0.045	12.5	0.0	1.2	1	0	0	1	1	1	0	Interferon-inducible	GTPase	(IIGP)
AAA_22	PF13401.1	gi|332796843|ref|YP_004458343.1|	-	0.11	12.5	1.7	4.4	7.4	0.4	3.3	1	1	2	3	3	3	0	AAA	domain
PduV-EutP	PF10662.4	gi|332796843|ref|YP_004458343.1|	-	0.13	11.7	0.4	5.8	6.3	0.0	2.2	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
cobW	PF02492.14	gi|332796843|ref|YP_004458343.1|	-	0.18	11.2	1.0	0.69	9.3	0.1	2.1	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Acid_PPase	PF12689.2	gi|332796844|ref|YP_004458344.1|	-	9.9e-13	48.0	0.2	1.6e-12	47.3	0.1	1.4	1	1	0	1	1	1	1	Acid	Phosphatase
HAD_2	PF13419.1	gi|332796844|ref|YP_004458344.1|	-	2.9e-08	34.1	0.2	1.4e-07	31.8	0.0	1.9	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|332796844|ref|YP_004458344.1|	-	4.5e-07	30.5	0.2	5.4e-05	23.6	0.0	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|332796844|ref|YP_004458344.1|	-	2.8e-06	27.0	0.8	3.1e-06	26.9	0.5	1.1	1	0	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
DUF705	PF05152.7	gi|332796844|ref|YP_004458344.1|	-	0.0003	19.8	0.2	0.0034	16.4	0.0	2.1	1	1	0	2	2	2	1	Protein	of	unknown	function	(DUF705)
DUF3895	PF13034.1	gi|332796844|ref|YP_004458344.1|	-	0.051	13.0	0.0	0.12	11.8	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3895)
TPP_enzyme_N	PF02776.13	gi|332796845|ref|YP_004458345.1|	-	1.1e-59	200.7	0.0	5e-57	192.1	0.0	2.2	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|332796845|ref|YP_004458345.1|	-	1e-46	158.2	0.0	2.5e-46	157.0	0.0	1.7	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|332796845|ref|YP_004458345.1|	-	1.1e-35	122.3	0.0	3.4e-35	120.7	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|332796845|ref|YP_004458345.1|	-	0.029	13.8	0.0	0.058	12.8	0.0	1.5	1	0	0	1	1	1	0	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
ACT_5	PF13710.1	gi|332796846|ref|YP_004458346.1|	-	1.2e-08	34.5	0.0	1.6e-08	34.2	0.0	1.1	1	0	0	1	1	1	1	ACT	domain
IlvN	PF07991.7	gi|332796847|ref|YP_004458347.1|	-	3.5e-74	247.6	0.1	5e-74	247.1	0.1	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|332796847|ref|YP_004458347.1|	-	4.4e-40	136.9	2.5	6e-40	136.5	1.7	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|332796847|ref|YP_004458347.1|	-	5.4e-09	36.3	0.0	1.4e-08	35.0	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|332796847|ref|YP_004458347.1|	-	1.1e-07	31.8	0.0	2.2e-07	30.8	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|332796847|ref|YP_004458347.1|	-	5.7e-07	28.8	0.0	1.1e-06	27.8	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.16	gi|332796847|ref|YP_004458347.1|	-	3.6e-06	26.9	0.0	7.4e-06	25.8	0.0	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|332796847|ref|YP_004458347.1|	-	0.00013	21.7	0.8	0.4	10.3	0.0	3.0	3	0	0	3	3	3	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_10	PF13460.1	gi|332796847|ref|YP_004458347.1|	-	0.023	14.6	0.0	0.047	13.6	0.0	1.5	2	0	0	2	2	2	0	NADH(P)-binding
ApbA	PF02558.11	gi|332796847|ref|YP_004458347.1|	-	0.026	13.9	0.0	0.05	13.0	0.0	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
PDH	PF02153.12	gi|332796847|ref|YP_004458347.1|	-	0.053	12.4	0.0	0.088	11.6	0.0	1.3	1	0	0	1	1	1	0	Prephenate	dehydrogenase
DUF1704	PF08014.6	gi|332796847|ref|YP_004458347.1|	-	0.078	11.9	0.0	0.11	11.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1704)
XH	PF03469.9	gi|332796847|ref|YP_004458347.1|	-	0.079	12.6	0.5	0.16	11.6	0.4	1.5	1	0	0	1	1	1	0	XH	domain
Hjc	PF01870.13	gi|332796848|ref|YP_004458348.1|	-	7.9e-25	86.2	0.1	1.2e-24	85.7	0.0	1.3	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
DUF3883	PF13020.1	gi|332796848|ref|YP_004458348.1|	-	0.079	12.7	0.0	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3883)
T2SE	PF00437.15	gi|332796849|ref|YP_004458349.1|	-	2.7e-10	39.6	0.0	4.3e-10	38.9	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|332796849|ref|YP_004458349.1|	-	2.5e-05	25.0	0.0	0.00013	22.8	0.0	2.2	2	0	0	2	2	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796849|ref|YP_004458349.1|	-	7.2e-05	23.0	0.4	0.001	19.3	0.0	2.9	3	0	0	3	3	3	1	AAA	domain
AAA	PF00004.24	gi|332796849|ref|YP_004458349.1|	-	0.00034	20.8	0.1	0.011	15.9	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|332796849|ref|YP_004458349.1|	-	0.0037	17.4	0.0	0.072	13.2	0.0	2.8	3	1	0	3	3	3	1	AAA	domain
IstB_IS21	PF01695.12	gi|332796849|ref|YP_004458349.1|	-	0.0041	16.5	0.0	0.0073	15.7	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
RuvB_N	PF05496.7	gi|332796849|ref|YP_004458349.1|	-	0.0044	16.1	0.0	0.015	14.3	0.0	1.8	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|332796849|ref|YP_004458349.1|	-	0.0083	16.1	0.0	0.04	13.9	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|332796849|ref|YP_004458349.1|	-	0.0092	15.4	0.0	0.019	14.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|332796849|ref|YP_004458349.1|	-	0.0099	15.6	0.0	0.019	14.6	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|332796849|ref|YP_004458349.1|	-	0.01	15.7	0.0	0.069	13.0	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
DnaB_C	PF03796.10	gi|332796849|ref|YP_004458349.1|	-	0.015	14.1	0.0	0.03	13.2	0.0	1.4	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
Zeta_toxin	PF06414.7	gi|332796849|ref|YP_004458349.1|	-	0.018	14.1	0.0	0.084	11.9	0.0	1.9	2	0	0	2	2	2	0	Zeta	toxin
AAA_28	PF13521.1	gi|332796849|ref|YP_004458349.1|	-	0.018	14.9	0.0	0.035	14.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|332796849|ref|YP_004458349.1|	-	0.019	14.4	0.0	0.032	13.6	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
FtsK_SpoIIIE	PF01580.13	gi|332796849|ref|YP_004458349.1|	-	0.021	14.2	0.0	0.05	13.0	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_14	PF13173.1	gi|332796849|ref|YP_004458349.1|	-	0.021	14.6	0.1	0.58	10.0	0.0	2.9	3	1	0	3	3	2	0	AAA	domain
Sigma54_activ_2	PF14532.1	gi|332796849|ref|YP_004458349.1|	-	0.024	14.6	0.0	0.05	13.6	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|332796849|ref|YP_004458349.1|	-	0.026	14.1	0.1	0.052	13.1	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_5	PF07728.9	gi|332796849|ref|YP_004458349.1|	-	0.027	14.1	0.1	0.077	12.7	0.0	1.8	2	0	0	2	2	1	0	AAA	domain	(dynein-related	subfamily)
ArgK	PF03308.11	gi|332796849|ref|YP_004458349.1|	-	0.049	12.4	0.0	0.086	11.6	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
NTPase_1	PF03266.10	gi|332796849|ref|YP_004458349.1|	-	0.049	13.3	0.1	0.18	11.5	0.0	2.0	1	0	0	1	1	1	0	NTPase
ATP_bind_1	PF03029.12	gi|332796849|ref|YP_004458349.1|	-	0.062	12.8	0.1	0.11	12.0	0.1	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
KTI12	PF08433.5	gi|332796849|ref|YP_004458349.1|	-	0.07	12.3	0.0	0.14	11.3	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
RNA_helicase	PF00910.17	gi|332796849|ref|YP_004458349.1|	-	0.087	13.0	0.0	0.22	11.6	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_3	PF07726.6	gi|332796849|ref|YP_004458349.1|	-	0.088	12.4	0.0	0.2	11.2	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AMNp_N	PF10423.4	gi|332796849|ref|YP_004458349.1|	-	0.13	11.8	0.0	1.9	8.0	0.0	2.4	2	0	0	2	2	2	0	Bacterial	AMP	nucleoside	phosphorylase	N-terminus
AAA_30	PF13604.1	gi|332796849|ref|YP_004458349.1|	-	0.23	11.0	0.0	0.39	10.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
KH_1	PF00013.24	gi|332796849|ref|YP_004458349.1|	-	0.31	10.6	3.4	0.34	10.5	0.2	2.7	3	0	0	3	3	2	0	KH	domain
SNO	PF01174.14	gi|332796850|ref|YP_004458350.1|	-	1.3e-46	158.6	0.1	1.4e-46	158.4	0.1	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|332796850|ref|YP_004458350.1|	-	5.8e-11	42.2	0.1	1.3e-10	41.0	0.1	1.6	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.12	gi|332796850|ref|YP_004458350.1|	-	3.1e-07	30.2	0.0	3.7e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	S51
GATase	PF00117.23	gi|332796850|ref|YP_004458350.1|	-	6.3e-07	29.0	0.7	7.8e-06	25.4	0.5	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|332796850|ref|YP_004458350.1|	-	0.0056	16.1	0.1	0.0085	15.5	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|332796850|ref|YP_004458350.1|	-	0.011	14.9	0.0	0.018	14.3	0.0	1.3	1	0	0	1	1	1	0	Putative	amidotransferase
Peptidase_C26	PF07722.8	gi|332796850|ref|YP_004458350.1|	-	0.25	10.7	2.0	6.5	6.1	1.4	2.9	1	1	0	1	1	1	0	Peptidase	C26
SOR_SNZ	PF01680.12	gi|332796851|ref|YP_004458351.1|	-	2.2e-97	324.6	3.1	2.9e-97	324.3	2.1	1.1	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|332796851|ref|YP_004458351.1|	-	2.1e-07	30.3	3.5	1.1e-06	27.9	0.2	2.4	2	1	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
OMPdecase	PF00215.19	gi|332796851|ref|YP_004458351.1|	-	0.00062	19.2	1.2	0.33	10.3	0.1	2.6	2	1	1	3	3	3	2	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
IGPS	PF00218.16	gi|332796851|ref|YP_004458351.1|	-	0.0009	18.3	0.0	0.058	12.4	0.0	2.3	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
NanE	PF04131.9	gi|332796851|ref|YP_004458351.1|	-	0.0076	15.2	0.5	0.2	10.5	0.1	2.2	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Dus	PF01207.12	gi|332796851|ref|YP_004458351.1|	-	0.011	14.6	0.1	0.78	8.5	0.0	2.3	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
NMO	PF03060.10	gi|332796851|ref|YP_004458351.1|	-	0.021	14.0	3.4	0.027	13.6	0.1	2.2	2	1	0	2	2	2	0	Nitronate	monooxygenase
Trp_syntA	PF00290.15	gi|332796851|ref|YP_004458351.1|	-	0.026	13.0	0.0	0.051	12.1	0.0	1.5	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|332796851|ref|YP_004458351.1|	-	0.073	12.3	1.0	6.6	5.9	0.0	3.0	2	2	1	3	3	3	0	Histidine	biosynthesis	protein
Ribosomal_S26e	PF01283.14	gi|332796852|ref|YP_004458352.1|	-	2.1e-33	114.9	3.0	2.5e-33	114.6	2.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
DZR	PF12773.2	gi|332796852|ref|YP_004458352.1|	-	0.014	15.1	1.1	0.13	12.1	0.1	2.1	2	0	0	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|332796852|ref|YP_004458352.1|	-	0.092	11.9	0.8	0.092	11.9	0.6	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-dskA_traR	PF01258.12	gi|332796852|ref|YP_004458352.1|	-	0.49	10.1	5.4	0.42	10.3	0.2	2.3	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Lar_restr_allev	PF14354.1	gi|332796852|ref|YP_004458352.1|	-	0.54	10.6	4.0	2.4	8.5	2.8	2.0	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
TFIIS_C	PF01096.13	gi|332796852|ref|YP_004458352.1|	-	1.7	8.3	0.1	1.7	8.3	0.0	2.5	2	1	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
tRNA-synt_2b	PF00587.20	gi|332796853|ref|YP_004458353.1|	-	3.3e-27	95.1	0.7	9.1e-27	93.7	0.3	1.8	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|332796853|ref|YP_004458353.1|	-	1.5e-22	79.3	1.6	2.7e-22	78.4	0.7	1.8	2	0	0	2	2	2	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|332796853|ref|YP_004458353.1|	-	3.1e-18	65.4	0.2	8.2e-18	64.0	0.1	1.8	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
tRNA-synt_2	PF00152.15	gi|332796853|ref|YP_004458353.1|	-	0.0032	16.3	1.5	0.023	13.4	0.3	2.5	2	1	0	2	2	2	1	tRNA	synthetases	class	II	(D,	K	and	N)
AKAP7_NLS	PF10469.4	gi|332796853|ref|YP_004458353.1|	-	0.017	14.8	0.0	4.6	6.8	0.0	2.5	2	0	0	2	2	2	0	AKAP7	2'5'	RNA	ligase-like	domain
Vfa1	PF08432.5	gi|332796853|ref|YP_004458353.1|	-	0.075	13.0	0.7	0.075	13.0	0.5	2.0	2	1	0	2	2	2	0	AAA-ATPase	Vps4-associated	protein	1
ATP-synt_C	PF00137.16	gi|332796854|ref|YP_004458354.1|	-	4.9e-16	58.3	19.9	4.9e-16	58.3	13.8	1.7	1	1	1	2	2	2	1	ATP	synthase	subunit	C
DUF3309	PF11752.3	gi|332796854|ref|YP_004458354.1|	-	0.042	13.6	1.8	0.042	13.6	1.2	3.1	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF3309)
Nitrate_red_gam	PF02665.9	gi|332796854|ref|YP_004458354.1|	-	0.096	12.0	5.8	0.15	11.4	4.0	1.3	1	1	0	1	1	1	0	Nitrate	reductase	gamma	subunit
ABC2_membrane_4	PF12730.2	gi|332796854|ref|YP_004458354.1|	-	9.9	5.2	10.1	15	4.6	7.0	1.3	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ATP-synt_D	PF01813.12	gi|332796855|ref|YP_004458355.1|	-	6.6e-51	172.6	6.5	7.5e-51	172.4	4.5	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
GPAT_N	PF14829.1	gi|332796855|ref|YP_004458355.1|	-	0.02	14.6	4.0	0.091	12.4	0.5	2.7	2	1	1	3	3	3	0	Glycerol-3-phosphate	acyltransferase	N-terminal
DUF1759	PF03564.10	gi|332796855|ref|YP_004458355.1|	-	0.07	12.9	0.5	10	5.8	0.0	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1759)
ING	PF12998.2	gi|332796855|ref|YP_004458355.1|	-	0.087	13.1	0.6	2	8.7	0.0	2.5	2	1	0	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
ATP-synt_ab	PF00006.20	gi|332796856|ref|YP_004458356.1|	-	1.6e-58	197.7	0.0	2.2e-58	197.2	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|332796856|ref|YP_004458356.1|	-	1e-12	48.5	0.0	2e-12	47.5	0.0	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|332796856|ref|YP_004458356.1|	-	3.2e-11	43.2	2.8	7.3e-11	42.1	2.0	1.7	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|332796856|ref|YP_004458356.1|	-	0.0012	18.6	0.7	0.0035	17.2	0.5	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_ab	PF00006.20	gi|332796857|ref|YP_004458357.1|	-	8.4e-85	283.6	0.0	1.3e-84	282.9	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|332796857|ref|YP_004458357.1|	-	2.6e-19	69.7	2.0	4.4e-19	69.0	1.4	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|332796857|ref|YP_004458357.1|	-	5.1e-14	52.2	1.7	1.4e-13	50.8	0.8	2.1	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_22	PF13401.1	gi|332796857|ref|YP_004458357.1|	-	0.011	15.8	0.3	0.064	13.3	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Peptidase_M23	PF01551.17	gi|332796857|ref|YP_004458357.1|	-	0.063	13.3	0.1	1.6	8.8	0.0	2.5	2	0	0	2	2	2	0	Peptidase	family	M23
DUF2085	PF09858.4	gi|332796857|ref|YP_004458357.1|	-	0.12	12.4	0.0	0.24	11.5	0.0	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2085)
vATP-synt_E	PF01991.13	gi|332796858|ref|YP_004458358.1|	-	2.9e-11	43.0	12.5	4.7e-11	42.3	8.6	1.3	1	0	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
DUF445	PF04286.7	gi|332796858|ref|YP_004458358.1|	-	0.0092	15.5	9.9	0.19	11.2	1.7	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF445)
Amnionless	PF14828.1	gi|332796858|ref|YP_004458358.1|	-	0.068	11.6	1.1	0.093	11.2	0.8	1.1	1	0	0	1	1	1	0	Amnionless
DUF3038	PF11237.3	gi|332796858|ref|YP_004458358.1|	-	0.11	12.2	1.3	2.2	8.0	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3038)
MAGE	PF01454.14	gi|332796858|ref|YP_004458358.1|	-	0.65	9.3	6.8	3.4	6.9	4.7	1.9	1	1	0	1	1	1	0	MAGE	family
ATP-synt_B	PF00430.13	gi|332796858|ref|YP_004458358.1|	-	1.2	8.9	11.3	0.26	11.0	3.2	2.1	2	0	0	2	2	2	0	ATP	synthase	B/B'	CF(0)
HDV_ag	PF01517.13	gi|332796858|ref|YP_004458358.1|	-	1.7	8.2	7.1	8.4	6.0	0.0	2.4	2	1	1	3	3	3	0	Hepatitis	delta	virus	delta	antigen
DUF939_C	PF11728.3	gi|332796858|ref|YP_004458358.1|	-	2.3	7.9	8.0	0.93	9.2	1.9	2.3	1	1	0	2	2	2	0	DUF939	C-terminal	domain
ATP-synt_F	PF01990.12	gi|332796859|ref|YP_004458359.1|	-	1.3e-10	41.5	0.1	1.4e-10	41.4	0.1	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
Ras_bdg_2	PF14847.1	gi|332796859|ref|YP_004458359.1|	-	0.12	12.3	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	Ras-binding	domain	of	Byr2
WD40_alt	PF14077.1	gi|332796859|ref|YP_004458359.1|	-	0.63	9.7	2.8	3.1	7.5	2.0	2.0	1	1	0	1	1	1	0	Alternative	WD40	repeat	motif
V_ATPase_I	PF01496.14	gi|332796860|ref|YP_004458360.1|	-	1.7e-62	211.4	20.5	1.6e-61	208.2	14.2	2.3	1	1	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
Seryl_tRNA_N	PF02403.17	gi|332796860|ref|YP_004458360.1|	-	0.15	12.0	6.7	2.2	8.3	0.4	2.6	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
tRNA-synt_1g	PF09334.6	gi|332796861|ref|YP_004458361.1|	-	5.2e-149	496.1	0.0	6.6e-149	495.8	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|332796861|ref|YP_004458361.1|	-	1.3e-10	39.9	0.3	5.7e-05	21.3	0.0	3.1	2	1	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|332796861|ref|YP_004458361.1|	-	0.00018	21.3	0.0	0.00036	20.2	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DZR	PF12773.2	gi|332796861|ref|YP_004458361.1|	-	0.032	14.0	3.5	0.13	12.0	2.1	1.9	1	1	1	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|332796861|ref|YP_004458361.1|	-	0.6	9.4	5.6	4.6	6.5	2.8	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332796861|ref|YP_004458361.1|	-	0.69	9.4	3.3	3.3	7.2	0.3	2.7	2	1	0	2	2	2	0	zinc-ribbon	domain
DNA_primase_lrg	PF04104.9	gi|332796862|ref|YP_004458362.1|	-	3.9e-11	42.7	2.5	2.1e-05	23.9	0.2	2.9	1	1	1	2	2	2	2	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Sulfotransfer_1	PF00685.22	gi|332796862|ref|YP_004458362.1|	-	0.066	12.4	0.6	0.18	11.0	0.3	1.7	1	1	1	2	2	2	0	Sulfotransferase	domain
FBD	PF08387.5	gi|332796862|ref|YP_004458362.1|	-	0.11	12.0	1.4	0.15	11.5	0.1	1.9	2	0	0	2	2	2	0	FBD
CDP-OH_P_transf	PF01066.16	gi|332796863|ref|YP_004458363.1|	-	2.5e-15	56.6	1.0	2.5e-15	56.6	0.7	2.1	2	0	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
UPF0233	PF06781.7	gi|332796863|ref|YP_004458363.1|	-	3	7.5	4.6	7.3	6.2	0.1	2.6	2	1	1	3	3	3	0	Uncharacterised	protein	family	(UPF0233)
DUF4181	PF13789.1	gi|332796863|ref|YP_004458363.1|	-	7.9	6.4	14.8	3.5	7.5	4.4	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4181)
SUR7	PF06687.7	gi|332796863|ref|YP_004458363.1|	-	9.5	5.7	11.8	26	4.3	8.2	1.6	1	1	0	1	1	1	0	SUR7/PalI	family
Methyltransf_31	PF13847.1	gi|332796865|ref|YP_004458365.1|	-	1.1e-14	54.3	0.1	1.4e-14	53.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332796865|ref|YP_004458365.1|	-	4e-11	43.4	0.0	5.3e-11	43.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|332796865|ref|YP_004458365.1|	-	6e-11	42.0	0.2	7.6e-11	41.6	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
DOT1	PF08123.8	gi|332796865|ref|YP_004458365.1|	-	7e-09	35.2	0.0	4.1e-08	32.7	0.0	1.9	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_26	PF13659.1	gi|332796865|ref|YP_004458365.1|	-	1.5e-08	34.6	0.0	1.8e-08	34.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|332796865|ref|YP_004458365.1|	-	5.8e-08	32.0	0.1	7.4e-08	31.6	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
CMAS	PF02353.15	gi|332796865|ref|YP_004458365.1|	-	6.6e-08	31.9	0.0	7.8e-08	31.7	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|332796865|ref|YP_004458365.1|	-	6.8e-08	32.8	0.0	8.9e-08	32.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332796865|ref|YP_004458365.1|	-	1.8e-07	30.7	0.1	2.4e-07	30.3	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|332796865|ref|YP_004458365.1|	-	2.4e-07	31.1	0.0	3.5e-07	30.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|332796865|ref|YP_004458365.1|	-	4.3e-07	29.6	0.0	5.8e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Met_10	PF02475.11	gi|332796865|ref|YP_004458365.1|	-	1e-06	28.4	0.3	1.3e-06	28.1	0.2	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_12	PF08242.7	gi|332796865|ref|YP_004458365.1|	-	9.7e-06	25.9	0.1	1.6e-05	25.3	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|332796865|ref|YP_004458365.1|	-	9.1e-05	22.0	0.0	9.5e-05	22.0	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Ubie_methyltran	PF01209.13	gi|332796865|ref|YP_004458365.1|	-	0.00055	19.1	0.2	0.00072	18.7	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
DUF633	PF04816.7	gi|332796865|ref|YP_004458365.1|	-	0.00069	19.0	0.2	0.002	17.4	0.1	1.6	1	1	1	2	2	2	1	Family	of	unknown	function	(DUF633)
N6_Mtase	PF02384.11	gi|332796865|ref|YP_004458365.1|	-	0.0012	17.9	0.0	0.0018	17.4	0.0	1.3	1	0	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_23	PF13489.1	gi|332796865|ref|YP_004458365.1|	-	0.0015	18.2	0.1	0.0022	17.7	0.1	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|332796865|ref|YP_004458365.1|	-	0.0016	18.0	0.0	0.002	17.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MetW	PF07021.7	gi|332796865|ref|YP_004458365.1|	-	0.0034	16.8	0.1	0.0039	16.6	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
N6_N4_Mtase	PF01555.13	gi|332796865|ref|YP_004458365.1|	-	0.0073	15.8	0.0	0.011	15.1	0.0	1.2	1	0	0	1	1	1	1	DNA	methylase
TehB	PF03848.9	gi|332796865|ref|YP_004458365.1|	-	0.0094	15.1	0.2	0.014	14.5	0.1	1.3	1	1	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_32	PF13679.1	gi|332796865|ref|YP_004458365.1|	-	0.018	14.7	0.0	0.021	14.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.6	gi|332796865|ref|YP_004458365.1|	-	0.018	13.7	0.0	0.023	13.4	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_20	PF12147.3	gi|332796865|ref|YP_004458365.1|	-	0.073	11.9	0.1	0.088	11.6	0.0	1.1	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_8	PF05148.10	gi|332796865|ref|YP_004458365.1|	-	0.12	12.0	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	methyltransferase
DUF3419	PF11899.3	gi|332796865|ref|YP_004458365.1|	-	0.12	11.0	0.0	0.15	10.7	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3419)
FmrO	PF07091.6	gi|332796865|ref|YP_004458365.1|	-	0.13	11.2	0.0	0.17	10.8	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
DUF2286	PF10051.4	gi|332796866|ref|YP_004458366.1|	-	4.2e-53	178.7	5.2	4.7e-53	178.6	3.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
DNA_pol_B	PF00136.16	gi|332796867|ref|YP_004458367.1|	-	5.2e-89	299.1	2.6	8.4e-89	298.4	1.8	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|332796867|ref|YP_004458367.1|	-	1.7e-28	99.4	1.1	3.9e-28	98.2	0.8	1.7	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.4	gi|332796867|ref|YP_004458367.1|	-	8.7e-07	28.6	0.0	2.5e-06	27.1	0.0	1.8	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.1	gi|332796867|ref|YP_004458367.1|	-	1.6e-06	28.0	0.2	1.4e-05	24.9	0.0	2.6	2	0	0	2	2	2	1	RNase_H	superfamily
DUF3480	PF11979.3	gi|332796867|ref|YP_004458367.1|	-	0.032	12.8	0.2	0.23	10.0	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3480)
ACT_6	PF13740.1	gi|332796867|ref|YP_004458367.1|	-	0.084	12.6	0.0	0.22	11.2	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
EzrA	PF06160.7	gi|332796868|ref|YP_004458368.1|	-	0.0025	16.0	0.3	0.0037	15.5	0.2	1.2	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
Band_7	PF01145.20	gi|332796868|ref|YP_004458368.1|	-	0.14	12.0	1.0	1.1	9.1	0.0	2.3	2	0	0	2	2	2	0	SPFH	domain	/	Band	7	family
SR-25	PF10500.4	gi|332796868|ref|YP_004458368.1|	-	7.3	5.9	7.2	11	5.4	5.0	1.2	1	0	0	1	1	1	0	Nuclear	RNA-splicing-associated	protein
NAD_binding_5	PF07994.7	gi|332796869|ref|YP_004458369.1|	-	1.1e-42	146.5	0.0	8.7e-42	143.6	0.0	2.1	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|332796869|ref|YP_004458369.1|	-	8.4e-23	80.3	0.1	1.6e-21	76.2	0.1	2.4	2	1	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
MGS	PF02142.17	gi|332796869|ref|YP_004458369.1|	-	0.06	13.2	0.1	0.26	11.2	0.0	2.1	2	0	0	2	2	2	0	MGS-like	domain
Oxidored_q1	PF00361.15	gi|332796870|ref|YP_004458370.1|	-	5.5e-43	147.1	28.1	5.5e-43	147.1	19.5	2.7	2	1	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
ARL6IP6	PF15062.1	gi|332796870|ref|YP_004458370.1|	-	1.1	9.2	6.7	1	9.2	0.2	2.9	2	1	0	2	2	2	0	Haemopoietic	lineage	transmembrane	helix
Oxidored_q1	PF00361.15	gi|332796871|ref|YP_004458371.1|	-	3.1e-77	259.4	69.6	5.7e-51	173.3	19.8	6.9	4	2	3	7	7	7	3	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|332796871|ref|YP_004458371.1|	-	3.9e-08	32.7	14.1	8.1e-05	22.1	0.6	4.8	3	0	0	3	3	3	2	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.19	gi|332796872|ref|YP_004458372.1|	-	4.2e-12	45.4	9.0	4.7e-12	45.3	6.3	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
TspO_MBR	PF03073.10	gi|332796872|ref|YP_004458372.1|	-	0.0068	15.9	1.3	0.0078	15.7	0.9	1.1	1	0	0	1	1	1	1	TspO/MBR	family
ZYG-11_interact	PF05884.7	gi|332796872|ref|YP_004458372.1|	-	0.007	15.4	8.9	0.0074	15.4	6.2	1.2	1	0	0	1	1	1	1	Interactor	of	ZYG-11
NicO	PF03824.11	gi|332796872|ref|YP_004458372.1|	-	0.016	14.5	5.2	0.018	14.3	3.6	1.1	1	0	0	1	1	1	0	High-affinity	nickel-transport	protein
DUF3098	PF11297.3	gi|332796872|ref|YP_004458372.1|	-	0.11	12.1	5.5	0.099	12.3	3.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3098)
BCLP	PF12304.3	gi|332796872|ref|YP_004458372.1|	-	8	5.8	10.1	7.1	5.9	5.1	1.8	1	1	1	2	2	2	0	Beta-casein	like	protein
Oxidored_q3	PF00499.15	gi|332796873|ref|YP_004458373.1|	-	1.3e-10	41.1	24.5	1.3e-10	41.1	17.0	1.8	1	1	1	2	2	2	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
Viral_protease	PF08715.5	gi|332796873|ref|YP_004458373.1|	-	0.026	13.5	0.2	0.036	13.1	0.1	1.1	1	0	0	1	1	1	0	Papain	like	viral	protease
CTP_transf_1	PF01148.15	gi|332796873|ref|YP_004458373.1|	-	2.7	7.5	18.4	3.6	7.1	12.8	1.2	1	0	0	1	1	1	0	Cytidylyltransferase	family
Trp_oprn_chp	PF09534.5	gi|332796873|ref|YP_004458373.1|	-	3.2	7.3	9.7	40	3.7	6.7	2.1	1	1	0	1	1	1	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
Fer4	PF00037.22	gi|332796874|ref|YP_004458374.1|	-	6.8e-14	50.7	16.6	1.3e-08	34.0	2.4	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|332796874|ref|YP_004458374.1|	-	9e-11	41.4	6.7	1.6e-10	40.6	4.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332796874|ref|YP_004458374.1|	-	1.8e-10	40.2	12.9	1.6e-05	24.5	1.7	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|332796874|ref|YP_004458374.1|	-	2.1e-10	40.7	10.1	4.1e-10	39.8	7.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332796874|ref|YP_004458374.1|	-	4.2e-09	36.5	9.5	8.5e-09	35.5	6.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332796874|ref|YP_004458374.1|	-	4.3e-08	32.8	8.8	9.4e-08	31.7	6.2	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332796874|ref|YP_004458374.1|	-	5.7e-07	30.1	6.9	0.00015	22.4	5.8	2.4	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|332796874|ref|YP_004458374.1|	-	7.2e-07	28.7	13.3	0.0026	17.5	1.6	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332796874|ref|YP_004458374.1|	-	7.4e-07	29.4	0.3	0.039	14.3	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|332796874|ref|YP_004458374.1|	-	2.7e-06	27.2	9.4	0.0098	16.1	1.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|332796874|ref|YP_004458374.1|	-	7.6e-06	26.3	4.4	0.025	15.1	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.1	gi|332796874|ref|YP_004458374.1|	-	4.3e-05	23.4	17.1	0.00037	20.4	6.6	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332796874|ref|YP_004458374.1|	-	0.0013	19.1	18.0	0.012	16.0	3.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332796874|ref|YP_004458374.1|	-	0.013	15.9	15.2	0.29	11.5	2.3	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332796874|ref|YP_004458374.1|	-	0.047	14.0	12.4	0.22	11.9	2.8	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
NADHdh	PF00146.16	gi|332796875|ref|YP_004458375.1|	-	2.5e-51	174.5	23.7	6.3e-36	124.0	9.2	2.0	2	0	0	2	2	2	2	NADH	dehydrogenase
Complex1_49kDa	PF00346.14	gi|332796876|ref|YP_004458376.1|	-	9.8e-65	218.2	0.0	1.2e-64	217.9	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
Complex1_30kDa	PF00329.14	gi|332796877|ref|YP_004458377.1|	-	1.1e-31	109.0	0.0	1.4e-31	108.7	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Mac-1	PF09028.5	gi|332796877|ref|YP_004458377.1|	-	0.037	12.8	0.1	0.045	12.5	0.0	1.2	1	0	0	1	1	1	0	Mac	1
YscJ_FliF	PF01514.12	gi|332796877|ref|YP_004458377.1|	-	0.079	12.0	0.3	0.14	11.3	0.1	1.4	1	1	0	1	1	1	0	Secretory	protein	of	YscJ/FliF	family
BHD_3	PF10405.4	gi|332796877|ref|YP_004458377.1|	-	0.086	12.5	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Rad4	beta-hairpin	domain	3
Glyco_trans_4_2	PF13477.1	gi|332796877|ref|YP_004458377.1|	-	0.095	12.5	0.1	0.17	11.6	0.1	1.5	1	1	0	1	1	1	0	Glycosyl	transferase	4-like
Oxidored_q4	PF00507.14	gi|332796878|ref|YP_004458378.1|	-	3.8e-06	26.6	2.4	4.8e-06	26.3	1.7	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
Thy1	PF02511.10	gi|332796879|ref|YP_004458379.1|	-	8.9e-66	220.8	1.7	1.1e-65	220.5	1.2	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
DUF2360	PF10152.4	gi|332796879|ref|YP_004458379.1|	-	0.023	15.0	0.3	0.044	14.0	0.2	1.4	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
DUF2175	PF09943.4	gi|332796880|ref|YP_004458380.1|	-	1.9e-34	117.7	6.0	2.1e-34	117.5	4.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
Vps39_2	PF10367.4	gi|332796880|ref|YP_004458380.1|	-	0.00031	20.9	1.9	0.00097	19.2	0.1	2.1	2	0	0	2	2	2	1	Vacuolar	sorting	protein	39	domain	2
DUF2130	PF09903.4	gi|332796880|ref|YP_004458380.1|	-	0.00098	17.9	0.7	0.001	17.9	0.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2130)
COBRA1	PF06209.8	gi|332796880|ref|YP_004458380.1|	-	0.014	13.9	0.4	0.017	13.7	0.3	1.0	1	0	0	1	1	1	0	Cofactor	of	BRCA1	(COBRA1)
DUF3231	PF11553.3	gi|332796880|ref|YP_004458380.1|	-	0.02	14.3	0.4	0.026	14.0	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3231)
Phage_int_SAM_4	PF13495.1	gi|332796880|ref|YP_004458380.1|	-	0.038	14.3	0.2	0.05	13.9	0.2	1.3	1	0	0	1	1	1	0	Phage	integrase,	N-terminal	SAM-like	domain
FliG_N	PF14842.1	gi|332796880|ref|YP_004458380.1|	-	0.066	13.3	2.2	0.2	11.7	1.3	1.7	1	1	1	2	2	2	0	FliG	N-terminal	domain
BBS1	PF14779.1	gi|332796880|ref|YP_004458380.1|	-	0.17	10.8	1.6	0.21	10.5	1.1	1.1	1	0	0	1	1	1	0	Ciliary	BBSome	complex	subunit	1
DUF3283	PF11686.3	gi|332796880|ref|YP_004458380.1|	-	0.21	11.4	3.7	6.5	6.6	1.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3283)
CBF_beta	PF02312.12	gi|332796880|ref|YP_004458380.1|	-	0.29	10.7	2.0	0.8	9.3	0.0	2.0	1	1	1	2	2	2	0	Core	binding	factor	beta	subunit
PNPase	PF03726.9	gi|332796880|ref|YP_004458380.1|	-	0.41	10.9	3.4	0.86	9.9	0.5	2.0	1	1	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
XhlA	PF10779.4	gi|332796880|ref|YP_004458380.1|	-	2.5	8.0	7.4	1	9.2	1.1	2.2	1	1	1	2	2	2	0	Haemolysin	XhlA
Glyco_hydro_76	PF03663.9	gi|332796881|ref|YP_004458381.1|	-	0.0035	16.7	0.0	0.0054	16.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	76
C5-epim_C	PF06662.8	gi|332796881|ref|YP_004458381.1|	-	0.034	13.4	0.4	0.87	8.8	0.1	2.3	1	1	1	2	2	2	0	D-glucuronyl	C5-epimerase	C-terminus
Glyco_hydro_88	PF07470.8	gi|332796881|ref|YP_004458381.1|	-	0.036	13.1	0.1	0.068	12.2	0.1	1.5	1	1	0	1	1	1	0	Glycosyl	Hydrolase	Family	88
Thioredoxin_8	PF13905.1	gi|332796881|ref|YP_004458381.1|	-	0.048	13.7	0.0	0.2	11.7	0.0	2.0	1	1	0	1	1	1	0	Thioredoxin-like
DUF364	PF04016.7	gi|332796882|ref|YP_004458382.1|	-	2.5e-28	98.2	0.0	3.7e-28	97.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|332796882|ref|YP_004458382.1|	-	1.4e-18	66.7	0.0	2.6e-18	65.9	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4213)
DUF3988	PF13149.1	gi|332796882|ref|YP_004458382.1|	-	0.012	15.1	0.3	0.015	14.8	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3988)
NTP_transferase	PF00483.18	gi|332796883|ref|YP_004458383.1|	-	1.1e-35	123.1	0.0	1.4e-35	122.8	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|332796883|ref|YP_004458383.1|	-	4.2e-11	43.1	0.0	5.4e-11	42.8	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|332796883|ref|YP_004458383.1|	-	9.4e-08	31.2	6.3	3.2e-05	23.2	0.6	3.3	2	1	1	3	3	3	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|332796883|ref|YP_004458383.1|	-	0.0024	17.3	4.8	0.21	11.1	0.8	3.2	2	1	0	2	2	2	2	Hexapeptide	repeat	of	succinyl-transferase
Sod_Fe_C	PF02777.13	gi|332796884|ref|YP_004458384.1|	-	1.3e-37	127.8	0.8	2.3e-37	127.0	0.5	1.4	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|332796884|ref|YP_004458384.1|	-	3.2e-28	97.7	0.1	3.2e-28	97.7	0.1	2.7	3	0	0	3	3	3	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
LytR_cpsA_psr	PF03816.9	gi|332796885|ref|YP_004458385.1|	-	0.035	14.0	0.4	0.58	10.0	0.3	2.2	1	1	1	2	2	2	0	Cell	envelope-related	transcriptional	attenuator	domain
TusA	PF01206.12	gi|332796886|ref|YP_004458386.1|	-	0.00091	18.7	0.0	0.001	18.6	0.0	1.4	1	1	0	1	1	1	1	Sulfurtransferase	TusA
Thioredoxin_3	PF13192.1	gi|332796887|ref|YP_004458387.1|	-	1.5e-09	37.5	0.0	4e-09	36.1	0.0	1.8	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.19	gi|332796887|ref|YP_004458387.1|	-	0.0006	19.7	0.0	0.0019	18.1	0.0	1.9	1	1	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.1	gi|332796887|ref|YP_004458387.1|	-	0.011	15.7	0.0	0.026	14.5	0.0	1.6	1	0	0	1	1	1	0	Thioredoxin
Thioredoxin_2	PF13098.1	gi|332796887|ref|YP_004458387.1|	-	0.3	11.2	2.2	2.9	8.1	0.0	2.7	2	1	1	3	3	3	0	Thioredoxin-like	domain
Helicase_C_2	PF13307.1	gi|332796888|ref|YP_004458388.1|	-	1e-26	93.8	0.1	9.5e-26	90.7	0.0	2.2	2	0	0	2	2	2	1	Helicase	C-terminal	domain
DEAD_2	PF06733.10	gi|332796888|ref|YP_004458388.1|	-	6.2e-23	81.0	0.0	2e-22	79.4	0.0	1.9	1	0	0	1	1	1	1	DEAD_2
DEAD	PF00270.24	gi|332796888|ref|YP_004458388.1|	-	9.6e-05	21.9	0.8	2.3	7.6	0.0	4.1	2	1	1	3	3	3	2	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|332796888|ref|YP_004458388.1|	-	0.001	18.9	1.5	0.0069	16.2	0.0	2.6	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
MYCBPAP	PF14646.1	gi|332796888|ref|YP_004458388.1|	-	0.045	12.4	0.9	0.67	8.6	0.0	2.1	2	0	0	2	2	2	0	MYCBP-associated	protein	family
DUF3398	PF11878.3	gi|332796888|ref|YP_004458388.1|	-	0.085	12.7	0.3	0.16	11.8	0.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3398)
ThiC	PF01964.13	gi|332796889|ref|YP_004458389.1|	-	6.7e-178	591.5	0.0	7.7e-178	591.3	0.0	1.0	1	0	0	1	1	1	1	ThiC	family
ADH_zinc_N	PF00107.21	gi|332796889|ref|YP_004458389.1|	-	0.042	13.3	0.4	4.1	6.9	0.0	3.0	3	0	0	3	3	3	0	Zinc-binding	dehydrogenase
Rieske	PF00355.21	gi|332796890|ref|YP_004458390.1|	-	1.3e-13	50.2	0.0	1.5e-13	50.0	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|332796890|ref|YP_004458390.1|	-	0.00029	20.5	0.0	0.00039	20.1	0.0	1.2	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
DHquinase_I	PF01487.10	gi|332796891|ref|YP_004458391.1|	-	3.3e-15	56.3	0.8	1.4e-14	54.3	0.5	1.8	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
Prefoldin_3	PF13758.1	gi|332796891|ref|YP_004458391.1|	-	0.039	13.7	0.3	0.11	12.3	0.1	1.8	2	0	0	2	2	2	0	Prefoldin	subunit
N-SET	PF11764.3	gi|332796891|ref|YP_004458391.1|	-	0.075	12.9	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	COMPASS	(Complex	proteins	associated	with	Set1p)	component	N
EPSP_synthase	PF00275.15	gi|332796892|ref|YP_004458392.1|	-	1.1e-55	188.7	0.0	1.1e-53	182.2	0.0	2.0	1	1	1	2	2	2	2	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
GHMP_kinases_N	PF00288.21	gi|332796893|ref|YP_004458393.1|	-	9.4e-08	32.0	0.2	2.3e-07	30.7	0.1	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|332796893|ref|YP_004458393.1|	-	0.00015	21.8	0.0	0.00026	21.1	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
Chorismate_synt	PF01264.16	gi|332796894|ref|YP_004458394.1|	-	1.4e-134	447.9	0.0	1.6e-134	447.7	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Shikimate_dh_N	PF08501.6	gi|332796895|ref|YP_004458395.1|	-	7.6e-27	93.2	0.0	2.4e-26	91.5	0.0	1.9	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|332796895|ref|YP_004458395.1|	-	1.3e-10	41.5	0.0	2e-10	40.8	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
DHQ_synthase	PF01761.15	gi|332796896|ref|YP_004458396.1|	-	3.8e-93	311.1	0.0	4.5e-93	310.9	0.0	1.0	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH_2	PF13685.1	gi|332796896|ref|YP_004458396.1|	-	1e-09	38.1	0.0	1.5e-09	37.5	0.0	1.3	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|332796896|ref|YP_004458396.1|	-	2.3e-06	26.5	0.1	0.00023	19.9	0.0	2.3	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
DAHP_synth_1	PF00793.15	gi|332796897|ref|YP_004458397.1|	-	5e-71	238.5	0.0	6.5e-71	238.1	0.0	1.1	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|332796897|ref|YP_004458397.1|	-	2.1e-11	43.4	0.0	1.4e-07	30.9	0.0	2.3	2	0	0	2	2	2	2	NeuB	family
PA	PF02225.17	gi|332796897|ref|YP_004458397.1|	-	0.34	10.6	1.8	16	5.2	0.0	3.0	2	1	0	2	2	2	0	PA	domain
CM_2	PF01817.16	gi|332796898|ref|YP_004458398.1|	-	6.9e-22	77.3	0.4	1.8e-21	75.9	0.3	1.8	1	0	0	1	1	1	1	Chorismate	mutase	type	II
PDH	PF02153.12	gi|332796898|ref|YP_004458398.1|	-	1.5e-19	69.9	0.0	2.5e-19	69.2	0.0	1.3	1	0	0	1	1	1	1	Prephenate	dehydrogenase
F420_oxidored	PF03807.12	gi|332796898|ref|YP_004458398.1|	-	9.2e-10	38.8	0.0	2.7e-09	37.3	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|332796898|ref|YP_004458398.1|	-	2.6e-07	30.8	0.0	8.1e-07	29.2	0.0	1.8	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
IlvN	PF07991.7	gi|332796898|ref|YP_004458398.1|	-	1.6e-06	27.5	0.0	5.7e-06	25.8	0.0	1.9	1	1	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|332796898|ref|YP_004458398.1|	-	0.00064	19.5	0.0	0.0012	18.7	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|332796898|ref|YP_004458398.1|	-	0.00065	18.9	0.0	0.0011	18.2	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|332796898|ref|YP_004458398.1|	-	0.0066	15.4	0.0	0.0099	14.8	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
TrkA_N	PF02254.13	gi|332796898|ref|YP_004458398.1|	-	0.033	14.1	0.1	0.14	12.1	0.0	2.0	2	0	0	2	2	2	0	TrkA-N	domain
FlaC_arch	PF05377.6	gi|332796898|ref|YP_004458398.1|	-	0.034	14.0	0.9	0.034	14.0	0.6	2.9	3	0	0	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
AdoHcyase_NAD	PF00670.16	gi|332796898|ref|YP_004458398.1|	-	0.088	12.6	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|332796898|ref|YP_004458398.1|	-	0.14	11.8	0.1	0.76	9.4	0.1	2.1	1	1	1	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Seryl_tRNA_N	PF02403.17	gi|332796898|ref|YP_004458398.1|	-	0.16	12.0	5.5	0.76	9.8	1.9	2.6	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
LAGLIDADG_3	PF14528.1	gi|332796898|ref|YP_004458398.1|	-	1.1	9.5	3.9	15	5.9	0.2	2.8	2	0	0	2	2	2	0	LAGLIDADG-like	domain
Transket_pyr	PF02779.19	gi|332796899|ref|YP_004458399.1|	-	6.1e-40	136.5	0.0	9.6e-40	135.9	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|332796899|ref|YP_004458399.1|	-	1.4e-28	99.3	0.1	2.7e-28	98.3	0.0	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
Transketolase_N	PF00456.16	gi|332796900|ref|YP_004458400.1|	-	1.4e-43	148.9	0.0	2.4e-43	148.2	0.0	1.3	1	1	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
E1_dh	PF00676.15	gi|332796900|ref|YP_004458400.1|	-	7.2e-09	34.7	0.0	1.2e-08	34.0	0.0	1.3	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|332796900|ref|YP_004458400.1|	-	1.6e-08	33.8	0.2	4.2e-05	22.6	0.3	2.5	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|332796900|ref|YP_004458400.1|	-	8.9e-07	28.6	1.0	1e-05	25.1	0.7	2.1	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
XFP_N	PF09364.5	gi|332796900|ref|YP_004458400.1|	-	2.1e-05	23.2	0.2	3.3e-05	22.6	0.1	1.4	1	1	0	1	1	1	1	XFP	N-terminal	domain
ThiF	PF00899.16	gi|332796901|ref|YP_004458401.1|	-	5.9e-45	152.4	0.2	9.3e-45	151.7	0.1	1.3	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|332796901|ref|YP_004458401.1|	-	6.7e-11	41.6	0.1	1.1e-10	40.9	0.1	1.4	1	0	0	1	1	1	1	MoeZ/MoeB	domain
Shikimate_DH	PF01488.15	gi|332796901|ref|YP_004458401.1|	-	0.00046	20.2	0.4	0.26	11.3	0.5	2.8	2	1	1	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
EndIII_4Fe-2S	PF10576.4	gi|332796901|ref|YP_004458401.1|	-	0.0069	16.5	2.0	0.053	13.7	0.1	2.6	2	0	0	2	2	2	1	Iron-sulfur	binding	domain	of	endonuclease	III
TrkA_N	PF02254.13	gi|332796901|ref|YP_004458401.1|	-	0.017	15.1	0.0	0.031	14.2	0.0	1.4	1	0	0	1	1	1	0	TrkA-N	domain
3HCDH_N	PF02737.13	gi|332796901|ref|YP_004458401.1|	-	0.07	12.7	0.0	0.1	12.2	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
adh_short	PF00106.20	gi|332796901|ref|YP_004458401.1|	-	0.11	12.4	0.0	0.2	11.5	0.0	1.4	1	1	0	1	1	1	0	short	chain	dehydrogenase
ELFV_dehydrog	PF00208.16	gi|332796901|ref|YP_004458401.1|	-	0.13	11.7	0.2	0.22	11.0	0.1	1.5	1	1	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
FAD_binding_3	PF01494.14	gi|332796901|ref|YP_004458401.1|	-	0.15	11.0	0.0	0.2	10.6	0.0	1.1	1	0	0	1	1	1	0	FAD	binding	domain
UPF0104	PF03706.8	gi|332796902|ref|YP_004458402.1|	-	3.3e-08	33.1	11.9	5.5e-08	32.4	8.3	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
DUF2674	PF10879.3	gi|332796902|ref|YP_004458402.1|	-	0.059	13.0	0.2	0.15	11.8	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2674)
Transaldolase	PF00923.14	gi|332796903|ref|YP_004458403.1|	-	0.049	12.7	0.3	0.085	11.9	0.2	1.3	1	0	0	1	1	1	0	Transaldolase
Pcc1	PF09341.5	gi|332796904|ref|YP_004458404.1|	-	0.0014	18.6	0.0	0.0015	18.4	0.0	1.0	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DUF2624	PF11116.3	gi|332796904|ref|YP_004458404.1|	-	0.039	14.4	1.4	0.075	13.5	0.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2624)
Ribosomal_L16	PF00252.13	gi|332796905|ref|YP_004458405.1|	-	1.6e-29	102.2	0.1	1.9e-29	102.1	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Diphthamide_syn	PF01866.12	gi|332796906|ref|YP_004458406.1|	-	1.4e-96	323.4	0.0	1.7e-96	323.1	0.0	1.1	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
B12-binding	PF02310.14	gi|332796906|ref|YP_004458406.1|	-	0.011	15.6	0.0	3	7.7	0.0	3.1	2	1	1	3	3	3	0	B12	binding	domain
DUF2204	PF09970.4	gi|332796906|ref|YP_004458406.1|	-	0.068	12.6	0.3	0.26	10.7	0.0	2.0	2	0	0	2	2	2	0	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
Vip3A_N	PF12495.3	gi|332796906|ref|YP_004458406.1|	-	0.17	11.5	1.5	0.32	10.6	1.0	1.4	1	0	0	1	1	1	0	Vegetative	insecticide	protein	3A	N	terminal
ECR1_N	PF14382.1	gi|332796907|ref|YP_004458407.1|	-	9.4e-11	40.8	0.1	2e-10	39.7	0.1	1.6	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.18	gi|332796907|ref|YP_004458407.1|	-	9.1e-05	22.4	1.0	0.00034	20.6	0.6	2.0	1	1	0	1	1	1	1	S1	RNA	binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796907|ref|YP_004458407.1|	-	0.0029	17.2	1.3	0.0054	16.3	0.9	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF2318	PF10080.4	gi|332796907|ref|YP_004458407.1|	-	0.011	15.4	0.4	0.019	14.7	0.3	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
RNHCP	PF12647.2	gi|332796907|ref|YP_004458407.1|	-	0.078	12.8	0.8	0.68	9.8	0.0	2.1	1	1	1	2	2	2	0	RNHCP	domain
zf-BED	PF02892.10	gi|332796907|ref|YP_004458407.1|	-	0.11	12.2	3.2	0.67	9.7	0.4	2.3	1	1	1	2	2	2	0	BED	zinc	finger
FdhE	PF04216.7	gi|332796907|ref|YP_004458407.1|	-	0.13	12.0	0.1	0.18	11.4	0.0	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
RNA_pol_L_2	PF13656.1	gi|332796908|ref|YP_004458408.1|	-	8.7e-19	66.7	0.1	1.1e-18	66.4	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|332796908|ref|YP_004458408.1|	-	6.4e-09	34.8	0.0	1.2e-08	33.9	0.0	1.5	1	1	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
TFIIS_C	PF01096.13	gi|332796909|ref|YP_004458409.1|	-	3e-22	77.9	8.4	2.9e-21	74.7	1.5	2.2	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
Zn_Tnp_IS1595	PF12760.2	gi|332796909|ref|YP_004458409.1|	-	1.4e-06	27.9	3.5	0.0001	22.0	0.5	2.4	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
DUF2387	PF09526.5	gi|332796909|ref|YP_004458409.1|	-	1e-05	25.3	5.0	0.027	14.3	0.2	2.2	1	1	1	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
TF_Zn_Ribbon	PF08271.7	gi|332796909|ref|YP_004458409.1|	-	0.0011	18.2	4.9	0.0021	17.3	0.1	2.7	3	1	0	3	3	2	1	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.5	gi|332796909|ref|YP_004458409.1|	-	0.0022	17.9	9.1	0.61	10.0	0.1	3.3	3	0	0	3	3	3	1	Zinc	ribbon	domain
Terminase_GpA	PF05876.7	gi|332796909|ref|YP_004458409.1|	-	0.0032	15.9	0.8	0.0032	15.9	0.6	1.3	1	1	0	1	1	1	1	Phage	terminase	large	subunit	(GpA)
zf-UBP	PF02148.14	gi|332796909|ref|YP_004458409.1|	-	0.007	16.4	1.8	0.21	11.7	0.2	2.2	1	1	1	2	2	2	1	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
zf-Mss51	PF13824.1	gi|332796909|ref|YP_004458409.1|	-	0.0082	15.9	0.7	0.17	11.7	0.2	2.2	2	0	0	2	2	2	1	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF2296	PF10058.4	gi|332796909|ref|YP_004458409.1|	-	0.0085	15.8	6.8	0.27	11.0	1.8	2.9	2	1	0	2	2	2	1	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-ribbon_3	PF13248.1	gi|332796909|ref|YP_004458409.1|	-	0.011	14.8	8.0	1.9	7.7	0.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-UBR	PF02207.15	gi|332796909|ref|YP_004458409.1|	-	0.027	14.1	1.9	3.9	7.2	0.0	3.0	3	0	0	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
RNA_POL_M_15KD	PF02150.11	gi|332796909|ref|YP_004458409.1|	-	0.036	13.7	0.2	0.036	13.7	0.1	3.0	3	0	0	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
zf-RING_4	PF14570.1	gi|332796909|ref|YP_004458409.1|	-	0.051	13.1	3.8	4.7	6.8	0.1	3.0	3	0	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
zinc_ribbon_5	PF13719.1	gi|332796909|ref|YP_004458409.1|	-	0.065	12.8	11.5	0.097	12.2	0.2	3.4	3	1	0	3	3	3	0	zinc-ribbon	domain
DUF2082	PF09855.4	gi|332796909|ref|YP_004458409.1|	-	0.071	12.9	5.8	3.8	7.4	0.2	3.0	3	0	0	3	3	3	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zinc_ribbon_4	PF13717.1	gi|332796909|ref|YP_004458409.1|	-	0.08	12.6	12.0	0.12	12.1	0.2	3.5	3	1	0	3	3	3	0	zinc-ribbon	domain
Baculo_LEF5_C	PF11792.3	gi|332796909|ref|YP_004458409.1|	-	0.086	12.2	0.0	0.086	12.2	0.0	2.3	3	0	0	3	3	2	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
NapB	PF03892.9	gi|332796909|ref|YP_004458409.1|	-	0.088	12.4	0.4	0.62	9.7	0.0	2.0	2	0	0	2	2	2	0	Nitrate	reductase	cytochrome	c-type	subunit	(NapB)
zf-CHY	PF05495.7	gi|332796909|ref|YP_004458409.1|	-	0.094	12.8	5.4	0.77	9.9	3.7	2.1	1	1	0	1	1	1	0	CHY	zinc	finger
zinc_ribbon_2	PF13240.1	gi|332796909|ref|YP_004458409.1|	-	0.096	12.2	11.7	4.2	6.9	0.4	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
Desulfoferrod_N	PF06397.7	gi|332796909|ref|YP_004458409.1|	-	0.1	11.9	9.8	0.82	9.1	0.1	2.5	3	0	0	3	3	2	0	Desulfoferrodoxin,	N-terminal	domain
OrfB_Zn_ribbon	PF07282.6	gi|332796909|ref|YP_004458409.1|	-	0.11	12.1	6.4	1.1	8.9	1.2	2.8	1	1	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-ISL3	PF14690.1	gi|332796909|ref|YP_004458409.1|	-	0.17	11.9	2.4	23	5.1	0.0	3.2	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
C1_4	PF07975.7	gi|332796909|ref|YP_004458409.1|	-	0.19	11.7	6.0	6.6	6.8	0.1	3.1	2	1	1	3	3	3	0	TFIIH	C1-like	domain
Zn_Tnp_IS91	PF14319.1	gi|332796909|ref|YP_004458409.1|	-	0.19	11.2	3.9	7.3	6.1	0.2	2.9	2	1	1	3	3	3	0	Transposase	zinc-binding	domain
Ribosomal_S27e	PF01667.12	gi|332796909|ref|YP_004458409.1|	-	0.27	10.8	5.5	3.9	7.0	1.5	3.0	2	1	0	2	2	2	0	Ribosomal	protein	S27
C1_3	PF07649.7	gi|332796909|ref|YP_004458409.1|	-	0.32	11.0	5.6	3	7.9	0.0	2.5	3	0	0	3	3	2	0	C1-like	domain
DNA_RNApol_7kD	PF03604.8	gi|332796909|ref|YP_004458409.1|	-	0.36	10.3	10.5	0.59	9.6	0.3	3.1	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.14	gi|332796909|ref|YP_004458409.1|	-	0.46	10.1	5.6	6.1	6.5	3.9	2.1	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
C1_2	PF03107.11	gi|332796909|ref|YP_004458409.1|	-	0.52	10.4	9.9	0.96	9.6	0.5	2.6	3	0	0	3	3	2	0	C1	domain
eIF-5_eIF-2B	PF01873.12	gi|332796909|ref|YP_004458409.1|	-	0.64	9.6	3.6	0.72	9.5	0.5	2.2	2	1	0	2	2	2	0	Domain	found	in	IF2B/IF5
zf-H2C2_2	PF13465.1	gi|332796909|ref|YP_004458409.1|	-	0.78	10.1	10.1	3.7	8.0	0.5	3.2	3	0	0	3	3	3	0	Zinc-finger	double	domain
Rpr2	PF04032.11	gi|332796909|ref|YP_004458409.1|	-	0.81	9.6	5.2	5.5	6.9	1.0	2.7	2	1	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DZR	PF12773.2	gi|332796909|ref|YP_004458409.1|	-	0.89	9.4	7.4	4	7.3	1.8	2.7	1	1	0	2	2	2	0	Double	zinc	ribbon
zf-TFIIB	PF13453.1	gi|332796909|ref|YP_004458409.1|	-	0.95	8.7	6.4	25	4.1	2.9	2.8	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
zf-HIT	PF04438.11	gi|332796909|ref|YP_004458409.1|	-	1.3	8.6	11.7	7.2	6.3	0.6	3.1	3	0	0	3	3	3	0	HIT	zinc	finger
ZZ	PF00569.12	gi|332796909|ref|YP_004458409.1|	-	1.4	8.5	6.9	14	5.2	0.1	3.1	3	0	0	3	3	3	0	Zinc	finger,	ZZ	type
PhnA_Zn_Ribbon	PF08274.7	gi|332796909|ref|YP_004458409.1|	-	1.4	8.7	6.3	6.3	6.6	1.3	2.8	2	1	0	2	2	2	0	PhnA	Zinc-Ribbon
Lar_restr_allev	PF14354.1	gi|332796909|ref|YP_004458409.1|	-	1.5	9.1	6.0	1.2e+02	3.0	4.2	2.7	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Mut7-C	PF01927.11	gi|332796909|ref|YP_004458409.1|	-	1.9	8.4	8.0	1.6e+02	2.1	5.6	2.2	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
Fer4_8	PF13183.1	gi|332796909|ref|YP_004458409.1|	-	2.8	8.0	5.9	55	3.8	4.1	2.3	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DUF3797	PF12677.2	gi|332796909|ref|YP_004458409.1|	-	3.8	7.2	10.3	2.3	7.8	0.4	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3797)
DUF1062	PF06353.7	gi|332796909|ref|YP_004458409.1|	-	3.9	7.6	5.7	14	5.8	0.4	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1062)
Rubredoxin	PF00301.15	gi|332796909|ref|YP_004458409.1|	-	4.5	7.2	8.7	32	4.5	0.1	3.3	3	0	0	3	3	3	0	Rubredoxin
Plasmid_stabil	PF05016.9	gi|332796912|ref|YP_004458412.1|	-	4.4e-05	23.8	0.0	4.9e-05	23.6	0.0	1.0	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
Fic	PF02661.13	gi|332796914|ref|YP_004458414.1|	-	3.4e-09	37.2	0.0	1.1e-08	35.6	0.0	1.9	1	1	0	1	1	1	1	Fic/DOC	family
DUF806	PF05657.6	gi|332796914|ref|YP_004458414.1|	-	0.12	12.4	0.3	0.35	10.9	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF806)
DUF3921	PF13060.1	gi|332796915|ref|YP_004458415.1|	-	0.026	14.4	0.1	0.038	13.8	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3921)
UPF0236	PF06782.6	gi|332796915|ref|YP_004458415.1|	-	0.087	11.2	1.6	0.098	11.0	1.1	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0236)
DUF1268	PF06896.6	gi|332796915|ref|YP_004458415.1|	-	0.1	12.9	0.3	0.12	12.7	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1268)
DUF1841	PF08897.6	gi|332796915|ref|YP_004458415.1|	-	0.12	12.2	0.1	0.18	11.6	0.1	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1841)
GXGXG	PF01493.14	gi|332796917|ref|YP_004458417.1|	-	2.6e-24	85.3	16.2	8e-23	80.4	11.2	2.5	1	1	0	1	1	1	1	GXGXG	motif
GATase_6	PF13522.1	gi|332796917|ref|YP_004458417.1|	-	1.2e-13	51.2	0.0	2.6e-13	50.1	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|332796917|ref|YP_004458417.1|	-	1e-11	44.1	0.0	4.4e-11	42.0	0.0	1.9	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|332796917|ref|YP_004458417.1|	-	1.5e-05	24.7	0.0	6.6e-05	22.6	0.0	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
Oxidored_nitro	PF00148.14	gi|332796917|ref|YP_004458417.1|	-	0.021	13.4	0.1	4.5	5.8	0.0	2.8	3	0	0	3	3	3	0	Nitrogenase	component	1	type	Oxidoreductase
Glu_synthase	PF01645.12	gi|332796918|ref|YP_004458418.1|	-	6.9e-104	347.6	2.8	5.2e-98	328.3	0.5	2.1	2	0	0	2	2	2	2	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.9	gi|332796918|ref|YP_004458418.1|	-	7e-16	58.3	0.0	1.6e-12	47.3	0.0	2.9	2	1	0	2	2	2	2	Glutamate	synthase	central	domain
FMN_dh	PF01070.13	gi|332796918|ref|YP_004458418.1|	-	1.4e-11	43.8	8.6	6.4e-07	28.5	2.7	3.3	3	0	0	3	3	3	2	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|332796918|ref|YP_004458418.1|	-	0.0019	17.4	8.7	0.0072	15.5	4.4	2.5	2	1	1	3	3	3	1	Nitronate	monooxygenase
PcrB	PF01884.12	gi|332796918|ref|YP_004458418.1|	-	0.011	14.9	4.2	0.28	10.3	0.4	2.6	2	1	1	3	3	3	0	PcrB	family
NanE	PF04131.9	gi|332796918|ref|YP_004458418.1|	-	0.013	14.4	0.2	0.029	13.3	0.1	1.5	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DHO_dh	PF01180.16	gi|332796918|ref|YP_004458418.1|	-	0.027	13.4	2.3	0.07	12.0	1.6	1.7	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
Pterin_bind	PF00809.17	gi|332796918|ref|YP_004458418.1|	-	0.25	10.6	2.0	0.85	8.9	0.0	2.3	2	0	0	2	2	2	0	Pterin	binding	enzyme
IMPDH	PF00478.20	gi|332796918|ref|YP_004458418.1|	-	0.4	9.5	7.2	0.17	10.7	2.3	2.1	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
tRNA_NucTransf2	PF09249.6	gi|332796920|ref|YP_004458420.1|	-	1.1e-43	147.7	0.0	2e-43	146.9	0.0	1.4	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|332796920|ref|YP_004458420.1|	-	1.2e-12	47.9	0.9	3.6e-12	46.4	0.1	2.2	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|332796920|ref|YP_004458420.1|	-	0.023	14.7	0.0	0.057	13.4	0.0	1.6	1	0	0	1	1	1	0	DNA	polymerase	beta	palm
LigT_PEase	PF02834.11	gi|332796921|ref|YP_004458421.1|	-	1e-26	92.7	0.0	8.4e-15	54.5	0.0	2.2	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|332796921|ref|YP_004458421.1|	-	1.1e-12	47.8	0.0	1.4e-12	47.6	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|332796921|ref|YP_004458421.1|	-	9.2e-11	41.8	0.0	2.1e-10	40.6	0.0	1.5	1	1	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
Corona_NS2A	PF05213.7	gi|332796921|ref|YP_004458421.1|	-	0.007	15.7	0.0	0.011	15.0	0.0	1.3	1	1	0	1	1	1	1	Coronavirus	NS2A	protein
AAA_17	PF13207.1	gi|332796922|ref|YP_004458422.1|	-	1e-07	32.7	0.1	1.6e-07	32.1	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796922|ref|YP_004458422.1|	-	6.4e-07	29.7	0.2	1.7e-06	28.3	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|332796922|ref|YP_004458422.1|	-	6.7e-05	22.8	0.0	7.4e-05	22.6	0.0	1.3	1	1	0	1	1	1	1	Adenylate	kinase
AAA_33	PF13671.1	gi|332796922|ref|YP_004458422.1|	-	7.4e-05	22.6	0.0	0.00029	20.7	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
Flu_B_M2	PF04772.7	gi|332796922|ref|YP_004458422.1|	-	0.026	14.5	0.5	2.8	8.0	0.0	2.1	1	1	1	2	2	2	0	Influenza	B	matrix	protein	2	(BM2)
CoaE	PF01121.15	gi|332796922|ref|YP_004458422.1|	-	0.027	13.8	0.0	1.6	8.0	0.0	2.2	1	1	1	2	2	2	0	Dephospho-CoA	kinase
RNA_binding	PF01877.12	gi|332796923|ref|YP_004458423.1|	-	3.5e-27	94.8	0.8	4e-27	94.6	0.5	1.0	1	0	0	1	1	1	1	RNA	binding
LAGLIDADG_1	PF00961.14	gi|332796923|ref|YP_004458423.1|	-	0.039	14.4	0.1	0.17	12.4	0.0	1.9	1	1	1	2	2	2	0	LAGLIDADG	endonuclease
Lactamase_B_2	PF12706.2	gi|332796924|ref|YP_004458424.1|	-	3.5e-27	95.1	0.0	7.6e-27	94.1	0.0	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|332796924|ref|YP_004458424.1|	-	1.9e-13	50.5	0.1	9.7e-12	44.9	0.0	2.2	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|332796924|ref|YP_004458424.1|	-	0.0085	15.8	0.0	0.028	14.1	0.0	1.8	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
UPF0020	PF01170.13	gi|332796925|ref|YP_004458425.1|	-	5.2e-29	101.1	0.0	7.6e-29	100.5	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|332796925|ref|YP_004458425.1|	-	3.1e-17	62.6	0.0	5e-17	62.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332796925|ref|YP_004458425.1|	-	9.6e-12	44.5	0.0	1.5e-11	44.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|332796925|ref|YP_004458425.1|	-	1.2e-10	41.1	0.1	3.3e-10	39.7	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|332796925|ref|YP_004458425.1|	-	1.4e-09	37.7	0.0	3.9e-06	26.5	0.0	2.4	2	1	0	2	2	2	2	DNA	methylase
Methyltransf_11	PF08241.7	gi|332796925|ref|YP_004458425.1|	-	1.6e-07	31.7	0.0	3.9e-06	27.2	0.0	3.0	2	1	1	3	3	3	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|332796925|ref|YP_004458425.1|	-	2.2e-07	30.4	0.0	3.9e-07	29.6	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_18	PF12847.2	gi|332796925|ref|YP_004458425.1|	-	6.3e-05	23.5	0.0	0.00017	22.1	0.0	1.7	2	1	0	2	2	2	1	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|332796925|ref|YP_004458425.1|	-	7.7e-05	22.2	0.1	0.00063	19.2	0.1	2.5	1	1	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_15	PF09445.5	gi|332796925|ref|YP_004458425.1|	-	0.00038	20.0	0.0	0.00067	19.2	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.1	gi|332796925|ref|YP_004458425.1|	-	0.00051	20.3	0.0	0.001	19.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|332796925|ref|YP_004458425.1|	-	0.0019	17.3	0.0	0.0059	15.7	0.0	1.7	1	1	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_23	PF13489.1	gi|332796925|ref|YP_004458425.1|	-	0.0075	15.9	0.0	0.064	12.9	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|332796925|ref|YP_004458425.1|	-	0.038	13.5	0.0	0.063	12.8	0.0	1.3	1	0	0	1	1	1	0	Met-10+	like-protein
Pribosyltran_N	PF13793.1	gi|332796926|ref|YP_004458426.1|	-	1.4e-35	121.5	0.0	3.5e-33	113.7	0.0	2.3	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|332796926|ref|YP_004458426.1|	-	4.1e-16	58.8	0.3	7.6e-15	54.7	0.0	2.8	3	0	0	3	3	3	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|332796926|ref|YP_004458426.1|	-	8.2e-11	41.9	0.5	1.8e-10	40.8	0.1	1.8	2	0	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
SRP54	PF00448.17	gi|332796926|ref|YP_004458426.1|	-	0.00086	18.8	0.0	0.0016	17.8	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
PRTase_2	PF15609.1	gi|332796926|ref|YP_004458426.1|	-	0.0066	15.7	0.0	0.0092	15.3	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase
UPRTase	PF14681.1	gi|332796926|ref|YP_004458426.1|	-	0.0076	15.4	0.1	0.032	13.4	0.0	1.9	2	0	0	2	2	2	1	Uracil	phosphoribosyltransferase
S_layer_C	PF05124.7	gi|332796926|ref|YP_004458426.1|	-	0.026	14.1	0.4	0.053	13.1	0.0	1.7	2	0	0	2	2	2	0	S-layer	like	family,	C-terminal	region
LsmAD	PF06741.8	gi|332796926|ref|YP_004458426.1|	-	0.086	12.9	0.6	0.41	10.7	0.1	2.1	1	1	1	2	2	2	0	LsmAD	domain
ATP_bind_1	PF03029.12	gi|332796927|ref|YP_004458427.1|	-	7e-55	186.1	0.0	7.9e-55	185.9	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|332796927|ref|YP_004458427.1|	-	9.7e-06	26.4	0.0	1.6e-05	25.6	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
PduV-EutP	PF10662.4	gi|332796927|ref|YP_004458427.1|	-	1.4e-05	24.6	0.0	0.11	12.0	0.0	3.0	2	1	1	3	3	3	2	Ethanolamine	utilisation	-	propanediol	utilisation
CbiA	PF01656.18	gi|332796927|ref|YP_004458427.1|	-	5e-05	22.7	0.0	7.6e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_16	PF13191.1	gi|332796927|ref|YP_004458427.1|	-	5.3e-05	23.2	0.0	0.00098	19.1	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|332796927|ref|YP_004458427.1|	-	0.00015	22.0	0.0	0.00033	20.9	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|332796927|ref|YP_004458427.1|	-	0.0024	16.7	0.0	0.0042	15.8	0.0	1.3	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|332796927|ref|YP_004458427.1|	-	0.0024	17.3	0.0	0.02	14.3	0.0	2.2	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
APS_kinase	PF01583.15	gi|332796927|ref|YP_004458427.1|	-	0.0027	17.3	0.0	0.0041	16.7	0.0	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
NACHT	PF05729.7	gi|332796927|ref|YP_004458427.1|	-	0.0036	16.9	0.0	0.0098	15.5	0.0	1.7	2	0	0	2	2	1	1	NACHT	domain
AAA_22	PF13401.1	gi|332796927|ref|YP_004458427.1|	-	0.0041	17.2	0.1	0.026	14.6	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|332796927|ref|YP_004458427.1|	-	0.005	16.5	0.0	0.0094	15.6	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|332796927|ref|YP_004458427.1|	-	0.0052	16.2	0.0	0.057	12.8	0.0	2.1	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
ArsA_ATPase	PF02374.10	gi|332796927|ref|YP_004458427.1|	-	0.0058	15.7	0.0	0.011	14.8	0.0	1.6	1	1	0	1	1	1	1	Anion-transporting	ATPase
KTI12	PF08433.5	gi|332796927|ref|YP_004458427.1|	-	0.0062	15.7	0.0	0.011	14.9	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_10	PF12846.2	gi|332796927|ref|YP_004458427.1|	-	0.0094	15.4	0.0	0.018	14.4	0.0	1.5	2	0	0	2	2	2	1	AAA-like	domain
NTPase_1	PF03266.10	gi|332796927|ref|YP_004458427.1|	-	0.01	15.5	0.0	0.026	14.2	0.0	1.7	2	0	0	2	2	1	0	NTPase
AAA_14	PF13173.1	gi|332796927|ref|YP_004458427.1|	-	0.015	15.1	0.0	0.034	14.0	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|332796927|ref|YP_004458427.1|	-	0.019	14.9	0.0	0.04	13.8	0.0	1.5	2	0	0	2	2	1	0	AAA	domain
AAA_24	PF13479.1	gi|332796927|ref|YP_004458427.1|	-	0.029	13.9	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
G-alpha	PF00503.15	gi|332796927|ref|YP_004458427.1|	-	0.045	12.4	0.0	0.084	11.5	0.0	1.4	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_29	PF13555.1	gi|332796927|ref|YP_004458427.1|	-	0.06	12.8	0.0	0.17	11.4	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|332796927|ref|YP_004458427.1|	-	0.072	12.2	0.0	1.6	7.8	0.0	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function,	DUF258
RNA_helicase	PF00910.17	gi|332796927|ref|YP_004458427.1|	-	0.076	13.2	0.0	0.22	11.6	0.0	1.8	2	0	0	2	2	1	0	RNA	helicase
Septin	PF00735.13	gi|332796927|ref|YP_004458427.1|	-	0.087	11.8	0.1	12	4.8	0.0	2.5	2	1	0	2	2	2	0	Septin
AAA_5	PF07728.9	gi|332796927|ref|YP_004458427.1|	-	0.089	12.5	0.0	0.55	9.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
KAP_NTPase	PF07693.9	gi|332796927|ref|YP_004458427.1|	-	0.095	11.6	0.0	0.14	11.1	0.0	1.3	1	0	0	1	1	1	0	KAP	family	P-loop	domain
MMR_HSR1	PF01926.18	gi|332796927|ref|YP_004458427.1|	-	0.098	12.6	0.0	0.4	10.6	0.0	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Viral_helicase1	PF01443.13	gi|332796927|ref|YP_004458427.1|	-	0.1	12.0	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Dynamin_N	PF00350.18	gi|332796927|ref|YP_004458427.1|	-	0.11	12.2	0.2	1.3	8.8	0.0	2.1	1	1	0	2	2	2	0	Dynamin	family
Miro	PF08477.8	gi|332796927|ref|YP_004458427.1|	-	0.13	12.7	0.0	11	6.5	0.0	2.9	3	0	0	3	3	3	0	Miro-like	protein
TrwB_AAD_bind	PF10412.4	gi|332796927|ref|YP_004458427.1|	-	0.13	10.8	0.0	0.2	10.2	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_30	PF13604.1	gi|332796927|ref|YP_004458427.1|	-	0.15	11.5	0.0	0.24	10.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
PCNA_C	PF02747.10	gi|332796928|ref|YP_004458428.1|	-	2.5e-11	43.5	0.0	5.6e-10	39.2	0.0	2.4	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
PCNA_N	PF00705.13	gi|332796928|ref|YP_004458428.1|	-	4.7e-08	32.6	0.0	8.7e-08	31.7	0.0	1.5	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
DNA_primase_S	PF01896.14	gi|332796929|ref|YP_004458429.1|	-	3.7e-20	72.2	0.1	3.4e-19	69.0	0.1	2.2	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
Rad50_zn_hook	PF04423.9	gi|332796929|ref|YP_004458429.1|	-	7.2	6.1	6.3	3	7.3	1.7	2.4	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
DNA_ligase_ZBD	PF03119.11	gi|332796929|ref|YP_004458429.1|	-	8.6	6.1	8.2	0.64	9.7	1.6	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
SPACA7	PF15307.1	gi|332796930|ref|YP_004458430.1|	-	0.046	13.8	0.6	0.066	13.3	0.4	1.3	1	0	0	1	1	1	0	Sperm	acrosome-associated	protein	7
Imm3	PF14425.1	gi|332796930|ref|YP_004458430.1|	-	0.059	13.3	3.1	0.072	13.0	1.1	1.9	1	1	0	1	1	1	0	Immunity	protein	Imm3
DNA_pol3_a_NII	PF11490.3	gi|332796930|ref|YP_004458430.1|	-	3.9	7.1	8.1	1.3	8.6	1.2	2.2	1	1	1	2	2	2	0	DNA	polymerase	III	polC-type	N-terminus	II
Ribosomal_L44	PF00935.14	gi|332796931|ref|YP_004458431.1|	-	2.2e-31	107.6	4.4	2.2e-31	107.6	3.0	1.4	1	1	1	2	2	2	1	Ribosomal	protein	L44
zinc_ribbon_4	PF13717.1	gi|332796931|ref|YP_004458431.1|	-	0.0044	16.6	3.2	0.09	12.4	0.1	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332796931|ref|YP_004458431.1|	-	0.005	16.0	0.3	2.3	7.5	0.0	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332796931|ref|YP_004458431.1|	-	0.0058	16.1	3.3	0.11	12.0	0.1	2.4	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|332796931|ref|YP_004458431.1|	-	0.019	14.7	1.4	0.062	13.1	1.0	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ISL3	PF14690.1	gi|332796931|ref|YP_004458431.1|	-	0.036	14.1	2.8	1.9	8.5	0.4	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-TFIIB	PF13453.1	gi|332796931|ref|YP_004458431.1|	-	0.1	11.8	0.2	2.7	7.2	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DUF2387	PF09526.5	gi|332796931|ref|YP_004458431.1|	-	0.11	12.3	0.2	5.6	6.9	0.0	2.3	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
TF_Zn_Ribbon	PF08271.7	gi|332796931|ref|YP_004458431.1|	-	0.13	11.6	2.6	1.5	8.1	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|332796931|ref|YP_004458431.1|	-	0.22	11.0	7.4	3.3	7.3	1.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332796931|ref|YP_004458431.1|	-	0.29	10.7	3.4	5.9	6.6	0.1	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Auto_anti-p27	PF06677.7	gi|332796931|ref|YP_004458431.1|	-	0.36	10.6	4.4	9.5	6.0	0.2	2.4	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Mu-like_Com	PF10122.4	gi|332796931|ref|YP_004458431.1|	-	0.36	9.9	3.3	6.4	5.9	0.2	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
Ribosomal_S27e	PF01667.12	gi|332796931|ref|YP_004458431.1|	-	0.71	9.4	0.1	0.71	9.4	0.0	2.5	3	0	0	3	3	3	0	Ribosomal	protein	S27
Ribosomal_L33	PF00471.15	gi|332796931|ref|YP_004458431.1|	-	0.78	10.0	8.5	0.36	11.0	0.8	2.8	2	1	1	3	3	3	0	Ribosomal	protein	L33
Ribosomal_S27e	PF01667.12	gi|332796932|ref|YP_004458432.1|	-	7.2e-21	73.4	1.6	8e-21	73.3	1.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.7	gi|332796932|ref|YP_004458432.1|	-	0.002	17.3	0.5	0.0033	16.7	0.3	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|332796932|ref|YP_004458432.1|	-	0.0022	17.1	4.1	0.36	10.1	0.5	2.2	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332796932|ref|YP_004458432.1|	-	0.0025	17.3	0.7	0.13	11.8	0.1	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|332796932|ref|YP_004458432.1|	-	0.0034	17.0	1.3	0.13	11.9	0.1	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
Hormone_6	PF00236.13	gi|332796932|ref|YP_004458432.1|	-	0.0052	16.5	0.2	0.0061	16.3	0.1	1.1	1	0	0	1	1	1	1	Glycoprotein	hormone
zinc_ribbon_2	PF13240.1	gi|332796932|ref|YP_004458432.1|	-	0.0076	15.7	4.9	0.062	12.8	3.1	2.2	1	1	0	1	1	1	1	zinc-ribbon	domain
RNA_pol_N	PF01194.12	gi|332796932|ref|YP_004458432.1|	-	0.016	15.1	1.2	0.12	12.3	0.0	2.1	2	0	0	2	2	2	0	RNA	polymerases	N	/	8	kDa	subunit
DUF35_N	PF12172.3	gi|332796932|ref|YP_004458432.1|	-	0.018	14.9	0.4	2.7	7.9	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DNA_RNApol_7kD	PF03604.8	gi|332796932|ref|YP_004458432.1|	-	0.018	14.5	2.7	0.08	12.4	1.8	1.9	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF3797	PF12677.2	gi|332796932|ref|YP_004458432.1|	-	0.035	13.7	2.3	0.04	13.5	0.3	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zf-LSD1	PF06943.7	gi|332796932|ref|YP_004458432.1|	-	0.04	13.5	6.6	0.23	11.1	0.8	2.5	2	1	0	2	2	2	0	LSD1	zinc	finger
HypA	PF01155.14	gi|332796932|ref|YP_004458432.1|	-	0.041	13.5	0.1	0.042	13.5	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Zn-ribbon_8	PF09723.5	gi|332796932|ref|YP_004458432.1|	-	0.048	13.6	0.4	0.083	12.8	0.3	1.4	1	0	0	1	1	1	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|332796932|ref|YP_004458432.1|	-	0.055	13.2	1.4	0.12	12.2	1.1	1.5	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332796932|ref|YP_004458432.1|	-	0.074	12.7	3.5	1.3	8.7	0.4	2.1	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Lar_restr_allev	PF14354.1	gi|332796932|ref|YP_004458432.1|	-	0.11	12.7	0.8	2.3	8.5	0.0	2.0	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
DUF951	PF06107.6	gi|332796932|ref|YP_004458432.1|	-	0.14	11.7	1.3	1	8.9	0.1	2.1	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF951)
Nudix_N_2	PF14803.1	gi|332796932|ref|YP_004458432.1|	-	0.15	11.7	0.8	12	5.7	0.0	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
DZR	PF12773.2	gi|332796932|ref|YP_004458432.1|	-	0.17	11.7	1.7	0.53	10.1	1.2	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|332796932|ref|YP_004458432.1|	-	0.46	9.9	3.0	3.5	7.1	2.4	2.0	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
zf-trcl	PF13451.1	gi|332796932|ref|YP_004458432.1|	-	0.49	10.0	3.8	32	4.2	2.6	2.1	1	1	0	1	1	1	0	Probable	zinc-binding	domain
Desulfoferrod_N	PF06397.7	gi|332796932|ref|YP_004458432.1|	-	0.68	9.3	2.8	2.1	7.7	0.2	2.1	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zf-CCHC_6	PF15288.1	gi|332796932|ref|YP_004458432.1|	-	0.71	9.5	5.8	1.6	8.4	1.0	2.5	3	0	0	3	3	3	0	Zinc	knuckle
EIF_2_alpha	PF07541.7	gi|332796933|ref|YP_004458433.1|	-	4.1e-27	94.1	1.5	5.1e-27	93.8	0.1	1.8	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|332796933|ref|YP_004458433.1|	-	1.9e-13	50.2	0.2	1.9e-13	50.2	0.1	1.9	2	0	0	2	2	2	1	S1	RNA	binding	domain
Nop10p	PF04135.7	gi|332796934|ref|YP_004458434.1|	-	2.2e-26	91.3	1.0	2.4e-26	91.1	0.7	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-tcix	PF14952.1	gi|332796934|ref|YP_004458434.1|	-	0.67	9.3	3.5	11	5.4	0.0	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
STT3	PF02516.9	gi|332796935|ref|YP_004458435.1|	-	8.6e-16	57.9	39.8	1.6e-15	57.0	27.6	1.4	1	0	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
BPD_transp_1	PF00528.17	gi|332796937|ref|YP_004458437.1|	-	1.6e-11	44.0	6.9	1.6e-11	44.0	4.8	2.1	1	1	1	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
MadM	PF03818.8	gi|332796937|ref|YP_004458437.1|	-	0.21	11.1	3.2	5.5	6.6	0.0	2.8	2	0	0	2	2	2	0	Malonate/sodium	symporter	MadM	subunit
SBP_bac_11	PF13531.1	gi|332796938|ref|YP_004458438.1|	-	1.7e-15	57.2	0.0	2.2e-15	56.9	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
FBD	PF08387.5	gi|332796938|ref|YP_004458438.1|	-	0.0078	15.6	0.0	0.016	14.6	0.0	1.5	1	0	0	1	1	1	1	FBD
DUF1372	PF07116.6	gi|332796938|ref|YP_004458438.1|	-	0.14	12.1	1.1	0.32	10.9	0.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1372)
adh_short	PF00106.20	gi|332796939|ref|YP_004458439.1|	-	7.1e-20	71.5	0.0	3.3e-19	69.4	0.0	1.9	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|332796939|ref|YP_004458439.1|	-	1.3e-14	54.5	0.1	1.7e-14	54.1	0.1	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.16	gi|332796939|ref|YP_004458439.1|	-	2.6e-05	23.7	0.1	0.00011	21.7	0.1	2.0	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|332796939|ref|YP_004458439.1|	-	0.00021	21.3	0.1	0.00051	20.0	0.0	1.8	1	1	0	1	1	1	1	NADH(P)-binding
KR	PF08659.5	gi|332796939|ref|YP_004458439.1|	-	0.14	11.8	0.0	2.3	7.8	0.0	2.1	1	1	0	1	1	1	0	KR	domain
Eno-Rase_NADH_b	PF12242.3	gi|332796939|ref|YP_004458439.1|	-	0.14	11.9	0.2	0.32	10.8	0.1	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
TatD_DNase	PF01026.16	gi|332796940|ref|YP_004458440.1|	-	1.1e-31	110.0	0.1	2.1e-31	109.0	0.0	1.5	1	1	0	1	1	1	1	TatD	related	DNase
Cob_adeno_trans	PF01923.13	gi|332796941|ref|YP_004458441.1|	-	6.8e-47	159.2	0.0	7.7e-47	159.1	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
OCD_Mu_crystall	PF02423.10	gi|332796942|ref|YP_004458442.1|	-	2.8e-47	161.0	0.1	3.9e-47	160.5	0.0	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|332796942|ref|YP_004458442.1|	-	4.3e-05	23.6	0.1	7.2e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|332796942|ref|YP_004458442.1|	-	0.00082	18.5	0.0	0.0015	17.7	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DUF2774	PF11242.3	gi|332796942|ref|YP_004458442.1|	-	0.0064	16.4	0.0	0.028	14.3	0.0	2.1	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF2774)
Lactamase_B	PF00753.22	gi|332796944|ref|YP_004458444.1|	-	2.3e-16	60.0	0.2	3.1e-16	59.6	0.1	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332796944|ref|YP_004458444.1|	-	4.1e-05	23.2	0.3	7.4e-05	22.3	0.2	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF3898	PF13037.1	gi|332796944|ref|YP_004458444.1|	-	0.0095	15.7	0.0	0.46	10.4	0.0	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3898)
Phage_integrase	PF00589.17	gi|332796945|ref|YP_004458445.1|	-	4.6e-43	146.8	1.4	2.1e-42	144.7	0.5	1.9	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|332796945|ref|YP_004458445.1|	-	1.5e-11	44.4	0.1	3.2e-07	30.5	0.0	2.9	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|332796945|ref|YP_004458445.1|	-	3.2e-06	27.1	0.1	3.7e-05	23.8	0.0	2.5	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
DUF3786	PF12654.2	gi|332796945|ref|YP_004458445.1|	-	0.083	12.1	0.0	3	7.0	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3786)
Radical_SAM	PF04055.16	gi|332796946|ref|YP_004458446.1|	-	3.1e-16	59.9	0.2	5.3e-15	55.9	0.2	2.2	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332796946|ref|YP_004458446.1|	-	4.8e-11	42.9	0.1	2.5e-10	40.5	0.0	2.2	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|332796946|ref|YP_004458446.1|	-	3.8e-10	39.8	0.0	3.3e-09	36.7	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|332796946|ref|YP_004458446.1|	-	0.00055	20.2	0.1	0.0074	16.6	0.0	2.4	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
TBPIP_N	PF15517.1	gi|332796946|ref|YP_004458446.1|	-	0.0085	15.7	0.0	0.019	14.5	0.0	1.6	1	0	0	1	1	1	1	TBP-interacting	protein	N-terminus
Hexapep	PF00132.19	gi|332796947|ref|YP_004458447.1|	-	4.2e-19	67.1	16.3	1.3e-06	27.6	0.0	4.7	3	1	2	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|332796947|ref|YP_004458447.1|	-	1.4e-09	37.2	6.5	0.00074	19.0	0.0	3.6	2	1	0	3	3	3	3	Hexapeptide	repeat	of	succinyl-transferase
Nol1_Nop2_Fmu	PF01189.12	gi|332796948|ref|YP_004458448.1|	-	1.1e-31	110.2	0.4	1.1e-30	107.0	0.0	2.2	2	1	1	3	3	3	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|332796948|ref|YP_004458448.1|	-	2.5e-08	33.6	0.0	4.6e-08	32.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PUA	PF01472.15	gi|332796948|ref|YP_004458448.1|	-	1.4e-05	24.7	0.7	3.7e-05	23.3	0.5	1.7	1	0	0	1	1	1	1	PUA	domain
MTS	PF05175.9	gi|332796948|ref|YP_004458448.1|	-	9.3e-05	21.8	0.0	0.00015	21.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|332796948|ref|YP_004458448.1|	-	0.00055	19.9	0.0	0.00084	19.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|332796948|ref|YP_004458448.1|	-	0.003	17.5	0.0	0.011	15.7	0.0	1.9	1	1	1	2	2	2	1	FtsJ-like	methyltransferase
Methyltransf_18	PF12847.2	gi|332796948|ref|YP_004458448.1|	-	0.0038	17.8	0.0	0.008	16.7	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|332796948|ref|YP_004458448.1|	-	0.011	14.8	0.2	0.21	10.5	0.0	2.7	2	1	0	2	2	2	0	Putative	methyltransferase
Methyltransf_5	PF01795.14	gi|332796948|ref|YP_004458448.1|	-	0.044	13.0	0.0	0.085	12.1	0.0	1.5	1	1	0	1	1	1	0	MraW	methylase	family
Methyltransf_25	PF13649.1	gi|332796948|ref|YP_004458448.1|	-	0.062	13.6	0.0	0.11	12.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|332796948|ref|YP_004458448.1|	-	0.069	13.6	0.0	0.25	11.8	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
GHMP_kinases_C	PF08544.8	gi|332796949|ref|YP_004458449.1|	-	0.0023	18.0	0.0	0.0043	17.2	0.0	1.3	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|332796949|ref|YP_004458449.1|	-	0.063	13.3	0.0	0.13	12.3	0.0	1.6	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
AMP-binding	PF00501.23	gi|332796950|ref|YP_004458450.1|	-	4.5e-67	226.2	0.0	5.3e-67	226.0	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|332796950|ref|YP_004458450.1|	-	2.4e-08	34.7	0.1	4.5e-08	33.9	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Thioredoxin	PF00085.15	gi|332796951|ref|YP_004458451.1|	-	1.8e-25	88.5	0.3	1.8e-25	88.5	0.2	1.5	2	0	0	2	2	2	1	Thioredoxin
Thioredoxin_8	PF13905.1	gi|332796951|ref|YP_004458451.1|	-	3.5e-08	33.4	3.0	3.6e-05	23.7	0.1	2.9	2	1	1	3	3	3	2	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|332796951|ref|YP_004458451.1|	-	1.3e-06	28.1	0.3	1.5e-05	24.7	0.0	2.1	1	1	1	2	2	2	1	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|332796951|ref|YP_004458451.1|	-	1.7e-06	28.1	1.5	4.3e-06	26.8	0.2	2.1	2	1	0	2	2	2	1	Thioredoxin-like	domain
AhpC-TSA	PF00578.16	gi|332796951|ref|YP_004458451.1|	-	2.4e-06	27.2	0.5	0.0011	18.7	0.1	2.2	1	1	1	2	2	2	2	AhpC/TSA	family
Redoxin	PF08534.5	gi|332796951|ref|YP_004458451.1|	-	2.1e-05	24.1	0.7	0.00017	21.1	0.2	2.0	1	1	1	2	2	2	1	Redoxin
Thioredoxin_9	PF14595.1	gi|332796951|ref|YP_004458451.1|	-	0.00036	20.1	0.3	0.0005	19.6	0.2	1.2	1	0	0	1	1	1	1	Thioredoxin
HyaE	PF07449.6	gi|332796951|ref|YP_004458451.1|	-	0.0052	16.6	0.0	0.014	15.3	0.0	1.7	2	0	0	2	2	2	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_7	PF13899.1	gi|332796951|ref|YP_004458451.1|	-	0.0061	16.5	0.1	0.011	15.7	0.1	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_6	PF13848.1	gi|332796951|ref|YP_004458451.1|	-	0.017	14.9	1.9	0.02	14.7	0.1	1.9	2	1	1	3	3	3	0	Thioredoxin-like	domain
DSBA	PF01323.15	gi|332796951|ref|YP_004458451.1|	-	0.021	14.3	1.0	0.28	10.7	0.0	2.2	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
DIM1	PF02966.11	gi|332796951|ref|YP_004458451.1|	-	0.028	13.9	0.1	0.044	13.3	0.1	1.3	1	0	0	1	1	1	0	Mitosis	protein	DIM1
ABC_tran	PF00005.22	gi|332796952|ref|YP_004458452.1|	-	1.9e-20	73.5	0.0	2.9e-20	72.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332796952|ref|YP_004458452.1|	-	7.8e-12	45.7	4.3	4.1e-09	36.8	3.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|332796952|ref|YP_004458452.1|	-	2.4e-07	30.4	0.4	0.0013	18.2	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
AAA_22	PF13401.1	gi|332796952|ref|YP_004458452.1|	-	1.4e-06	28.4	0.2	3.5e-06	27.1	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332796952|ref|YP_004458452.1|	-	4.5e-06	27.4	0.7	7.6e-06	26.7	0.5	1.4	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|332796952|ref|YP_004458452.1|	-	1.1e-05	24.5	0.2	1.9e-05	23.7	0.1	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|332796952|ref|YP_004458452.1|	-	2.7e-05	24.6	9.1	0.00013	22.3	6.3	2.2	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|332796952|ref|YP_004458452.1|	-	0.00053	19.6	0.1	0.00099	18.7	0.1	1.4	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_29	PF13555.1	gi|332796952|ref|YP_004458452.1|	-	0.00053	19.4	0.0	0.0011	18.3	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|332796952|ref|YP_004458452.1|	-	0.00065	19.3	0.1	0.0012	18.5	0.1	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA	PF00004.24	gi|332796952|ref|YP_004458452.1|	-	0.0015	18.7	0.9	0.012	15.7	0.6	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|332796952|ref|YP_004458452.1|	-	0.0019	17.8	0.1	0.0024	17.5	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|332796952|ref|YP_004458452.1|	-	0.0021	18.3	3.0	0.0086	16.3	1.7	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|332796952|ref|YP_004458452.1|	-	0.003	17.1	0.0	0.0057	16.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|332796952|ref|YP_004458452.1|	-	0.003	16.6	1.7	0.003	16.6	1.2	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|332796952|ref|YP_004458452.1|	-	0.003	17.2	1.1	0.088	12.5	0.0	2.2	2	0	0	2	2	2	1	NTPase
Zot	PF05707.7	gi|332796952|ref|YP_004458452.1|	-	0.0036	16.7	2.4	0.079	12.4	1.6	2.2	1	1	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
MobB	PF03205.9	gi|332796952|ref|YP_004458452.1|	-	0.0048	16.6	0.1	0.0099	15.5	0.1	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Zeta_toxin	PF06414.7	gi|332796952|ref|YP_004458452.1|	-	0.0058	15.7	0.1	0.017	14.2	0.0	1.7	2	0	0	2	2	2	1	Zeta	toxin
AAA_16	PF13191.1	gi|332796952|ref|YP_004458452.1|	-	0.0061	16.5	0.1	0.013	15.5	0.0	1.5	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|332796952|ref|YP_004458452.1|	-	0.0077	16.1	2.9	0.25	11.2	2.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|332796952|ref|YP_004458452.1|	-	0.0095	15.6	0.1	0.19	11.4	0.0	2.4	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
NB-ARC	PF00931.17	gi|332796952|ref|YP_004458452.1|	-	0.012	14.5	1.1	0.018	13.8	0.8	1.6	1	1	0	1	1	1	0	NB-ARC	domain
SMC_N	PF02463.14	gi|332796952|ref|YP_004458452.1|	-	0.013	14.7	0.2	0.013	14.7	0.1	1.9	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|332796952|ref|YP_004458452.1|	-	0.014	14.7	0.0	0.031	13.6	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
Pox_A32	PF04665.7	gi|332796952|ref|YP_004458452.1|	-	0.015	14.6	0.4	0.049	12.9	0.0	1.9	2	0	0	2	2	2	0	Poxvirus	A32	protein
FtsK_SpoIIIE	PF01580.13	gi|332796952|ref|YP_004458452.1|	-	0.015	14.7	0.1	0.029	13.8	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Miro	PF08477.8	gi|332796952|ref|YP_004458452.1|	-	0.022	15.2	0.5	0.072	13.5	0.1	2.0	1	1	0	2	2	2	0	Miro-like	protein
MutS_V	PF00488.16	gi|332796952|ref|YP_004458452.1|	-	0.024	14.0	0.0	0.046	13.1	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	V
RNA_helicase	PF00910.17	gi|332796952|ref|YP_004458452.1|	-	0.038	14.1	0.1	0.51	10.5	0.0	2.1	2	0	0	2	2	2	0	RNA	helicase
AAA_19	PF13245.1	gi|332796952|ref|YP_004458452.1|	-	0.041	13.6	0.0	0.065	12.9	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|332796952|ref|YP_004458452.1|	-	0.044	13.6	0.0	0.067	13.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|332796952|ref|YP_004458452.1|	-	0.048	13.1	0.1	0.094	12.2	0.1	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
SRP54	PF00448.17	gi|332796952|ref|YP_004458452.1|	-	0.057	12.8	0.2	0.13	11.7	0.0	1.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_28	PF13521.1	gi|332796952|ref|YP_004458452.1|	-	0.076	12.9	0.0	0.15	12.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|332796952|ref|YP_004458452.1|	-	0.083	12.0	0.0	0.12	11.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
PRK	PF00485.13	gi|332796952|ref|YP_004458452.1|	-	0.086	12.3	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
ABC_ATPase	PF09818.4	gi|332796952|ref|YP_004458452.1|	-	0.094	11.2	0.4	0.4	9.2	0.1	1.9	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
Arch_ATPase	PF01637.13	gi|332796952|ref|YP_004458452.1|	-	0.14	11.8	3.0	0.63	9.6	2.1	1.9	1	1	0	1	1	1	0	Archaeal	ATPase
MMR_HSR1	PF01926.18	gi|332796952|ref|YP_004458452.1|	-	0.16	11.9	0.8	0.26	11.2	0.5	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
KaiC	PF06745.8	gi|332796952|ref|YP_004458452.1|	-	0.18	10.8	1.8	0.35	9.9	0.1	2.0	2	1	0	2	2	2	0	KaiC
Gln-synt_C	PF00120.19	gi|332796953|ref|YP_004458453.1|	-	4.4e-99	330.8	0.0	5.4e-99	330.5	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|332796953|ref|YP_004458453.1|	-	5.4e-24	83.5	0.0	1.1e-23	82.5	0.0	1.6	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
HTH_24	PF13412.1	gi|332796954|ref|YP_004458454.1|	-	1.6e-09	37.0	0.8	1.6e-09	37.0	0.6	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|332796954|ref|YP_004458454.1|	-	5.5e-09	35.6	0.1	1.3e-08	34.4	0.1	1.6	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|332796954|ref|YP_004458454.1|	-	2.1e-06	27.3	0.0	4.1e-06	26.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|332796954|ref|YP_004458454.1|	-	4.1e-05	23.1	0.7	8.3e-05	22.1	0.1	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|332796954|ref|YP_004458454.1|	-	0.0001	21.9	0.2	0.00036	20.1	0.2	1.9	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.1	gi|332796954|ref|YP_004458454.1|	-	0.00011	21.9	0.0	0.00032	20.4	0.0	1.8	2	0	0	2	2	1	1	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|332796954|ref|YP_004458454.1|	-	0.00031	20.2	0.0	0.00072	19.0	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|332796954|ref|YP_004458454.1|	-	0.0016	18.2	0.0	0.0031	17.3	0.0	1.6	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_36	PF13730.1	gi|332796954|ref|YP_004458454.1|	-	0.0026	17.8	0.4	0.012	15.6	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|332796954|ref|YP_004458454.1|	-	0.0044	17.3	0.0	0.014	15.7	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|332796954|ref|YP_004458454.1|	-	0.0061	16.3	0.1	0.028	14.2	0.1	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
GntR	PF00392.16	gi|332796954|ref|YP_004458454.1|	-	0.008	15.6	0.2	0.017	14.5	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
NMT1_2	PF13379.1	gi|332796954|ref|YP_004458454.1|	-	0.01	15.2	0.0	1.9	7.8	0.0	2.1	1	1	1	2	2	2	0	NMT1-like	family
Sulfolobus_pRN	PF05584.6	gi|332796954|ref|YP_004458454.1|	-	0.015	15.2	0.1	0.031	14.2	0.1	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
NMT1	PF09084.6	gi|332796954|ref|YP_004458454.1|	-	0.027	14.0	0.0	0.65	9.5	0.0	2.5	3	0	0	3	3	3	0	NMT1/THI5	like
DUF3343	PF11823.3	gi|332796954|ref|YP_004458454.1|	-	0.036	13.3	1.6	0.17	11.1	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3343)
EAP30	PF04157.11	gi|332796954|ref|YP_004458454.1|	-	0.039	13.1	0.0	0.083	12.0	0.0	1.5	1	0	0	1	1	1	0	EAP30/Vps36	family
Cdc6_C	PF09079.6	gi|332796954|ref|YP_004458454.1|	-	0.078	12.7	0.1	0.22	11.2	0.0	1.7	1	0	0	1	1	1	0	CDC6,	C	terminal
Cass2	PF14526.1	gi|332796954|ref|YP_004458454.1|	-	0.1	12.5	0.2	0.29	11.1	0.1	1.8	1	1	0	1	1	1	0	Integron-associated	effector	binding	protein
z-alpha	PF02295.12	gi|332796954|ref|YP_004458454.1|	-	0.11	12.3	0.0	0.23	11.2	0.0	1.5	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
FeoC	PF09012.5	gi|332796954|ref|YP_004458454.1|	-	0.11	12.1	0.2	6.8	6.4	0.1	2.3	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
DUF3783	PF12646.2	gi|332796954|ref|YP_004458454.1|	-	0.23	11.2	2.5	1.6	8.5	0.1	2.8	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF3783)
GTP_cyclohydroI	PF01227.17	gi|332796955|ref|YP_004458455.1|	-	4.2e-63	211.8	0.0	5.2e-63	211.5	0.0	1.1	1	0	0	1	1	1	1	GTP	cyclohydrolase	I
FlpD	PF02662.11	gi|332796955|ref|YP_004458455.1|	-	0.048	13.3	0.1	0.86	9.3	0.0	2.3	2	0	0	2	2	2	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Peptidase_M24	PF00557.19	gi|332796956|ref|YP_004458456.1|	-	4.9e-64	215.7	0.5	6.1e-64	215.4	0.4	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|332796956|ref|YP_004458456.1|	-	1e-10	42.2	0.0	2e-10	41.2	0.0	1.5	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Mob_synth_C	PF06463.8	gi|332796957|ref|YP_004458457.1|	-	8.4e-27	93.3	0.0	1.2e-26	92.8	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Radical_SAM	PF04055.16	gi|332796957|ref|YP_004458457.1|	-	1.8e-25	90.0	0.0	4e-25	88.8	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|332796957|ref|YP_004458457.1|	-	3.2e-08	33.6	0.2	8.9e-08	32.1	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|332796957|ref|YP_004458457.1|	-	8.7e-07	29.1	0.0	4.8e-06	26.7	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
EPSP_synthase	PF00275.15	gi|332796957|ref|YP_004458457.1|	-	0.014	13.8	0.0	0.021	13.2	0.0	1.2	1	0	0	1	1	1	0	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
zf-ribbon_3	PF13248.1	gi|332796958|ref|YP_004458458.1|	-	2.2e-05	23.4	1.3	0.013	14.7	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|332796958|ref|YP_004458458.1|	-	0.0001	21.5	1.7	0.0022	17.2	1.1	2.2	1	1	0	1	1	1	1	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.5	gi|332796958|ref|YP_004458458.1|	-	0.00045	20.0	0.5	0.13	12.2	0.0	2.2	2	0	0	2	2	2	1	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|332796958|ref|YP_004458458.1|	-	0.00048	20.3	0.1	0.00059	20.0	0.1	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zinc_ribbon_2	PF13240.1	gi|332796958|ref|YP_004458458.1|	-	0.00057	19.2	1.1	0.27	10.7	0.0	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
YhfH	PF14149.1	gi|332796958|ref|YP_004458458.1|	-	0.0017	18.0	1.0	0.68	9.7	0.0	2.2	2	0	0	2	2	2	1	YhfH-like	protein
Zn_Tnp_IS1595	PF12760.2	gi|332796958|ref|YP_004458458.1|	-	0.0022	17.7	1.3	0.0043	16.8	0.9	1.4	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|332796958|ref|YP_004458458.1|	-	0.0028	17.6	0.1	1.8	8.6	0.0	2.2	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Terminase_GpA	PF05876.7	gi|332796958|ref|YP_004458458.1|	-	0.0039	15.6	0.1	0.0046	15.3	0.1	1.0	1	0	0	1	1	1	1	Phage	terminase	large	subunit	(GpA)
zf-GRF	PF06839.7	gi|332796958|ref|YP_004458458.1|	-	0.0042	16.9	0.7	0.0066	16.3	0.5	1.4	1	0	0	1	1	1	1	GRF	zinc	finger
zf-TFIIB	PF13453.1	gi|332796958|ref|YP_004458458.1|	-	0.0051	15.9	2.1	0.035	13.2	1.8	1.9	1	1	1	2	2	2	1	Transcription	factor	zinc-finger
DZR	PF12773.2	gi|332796958|ref|YP_004458458.1|	-	0.0056	16.4	1.5	0.015	15.0	1.0	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
DUF1936	PF09151.5	gi|332796958|ref|YP_004458458.1|	-	0.0068	15.8	0.6	0.31	10.5	0.1	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1936)
zf-HIT	PF04438.11	gi|332796958|ref|YP_004458458.1|	-	0.0077	15.8	3.5	0.33	10.6	0.4	2.1	2	0	0	2	2	2	1	HIT	zinc	finger
GFA	PF04828.9	gi|332796958|ref|YP_004458458.1|	-	0.0083	16.0	0.8	0.38	10.7	0.0	2.1	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
UPF0547	PF10571.4	gi|332796958|ref|YP_004458458.1|	-	0.0099	15.5	2.3	0.21	11.3	0.1	2.2	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0547
Nudix_N_2	PF14803.1	gi|332796958|ref|YP_004458458.1|	-	0.011	15.4	0.2	2.1	8.0	0.0	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
DUF4428	PF14471.1	gi|332796958|ref|YP_004458458.1|	-	0.011	15.4	0.3	2	8.1	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
zf-C4_Topoisom	PF01396.14	gi|332796958|ref|YP_004458458.1|	-	0.011	15.1	1.5	2.3	7.7	0.1	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-tcix	PF14952.1	gi|332796958|ref|YP_004458458.1|	-	0.012	14.9	1.7	1.9	7.9	0.1	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-IS66	PF13005.2	gi|332796958|ref|YP_004458458.1|	-	0.013	15.4	4.6	0.55	10.2	1.1	2.1	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Cys_rich_KTR	PF14205.1	gi|332796958|ref|YP_004458458.1|	-	0.014	14.8	0.5	1.2	8.6	0.1	2.3	2	0	0	2	2	2	0	Cysteine-rich	KTR
zf-NADH-PPase	PF09297.6	gi|332796958|ref|YP_004458458.1|	-	0.017	14.6	1.7	3.2	7.3	0.1	2.5	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|332796958|ref|YP_004458458.1|	-	0.02	14.7	0.6	2.6	7.9	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
DUF329	PF03884.9	gi|332796958|ref|YP_004458458.1|	-	0.024	14.1	0.4	4.6	6.8	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
CpXC	PF14353.1	gi|332796958|ref|YP_004458458.1|	-	0.028	14.3	0.8	2.1	8.3	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
zf-HYPF	PF07503.7	gi|332796958|ref|YP_004458458.1|	-	0.028	13.8	0.4	1.2	8.5	0.0	2.3	2	0	0	2	2	2	0	HypF	finger
DNA_ligase_ZBD	PF03119.11	gi|332796958|ref|YP_004458458.1|	-	0.037	13.7	2.7	0.42	10.3	0.1	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DNA_RNApol_7kD	PF03604.8	gi|332796958|ref|YP_004458458.1|	-	0.039	13.4	1.6	5.4	6.5	0.1	2.4	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_5	PF13719.1	gi|332796958|ref|YP_004458458.1|	-	0.041	13.4	3.1	2.1	7.9	0.1	2.3	2	1	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|332796958|ref|YP_004458458.1|	-	0.045	14.0	0.3	0.063	13.5	0.2	1.3	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Prok-RING_1	PF14446.1	gi|332796958|ref|YP_004458458.1|	-	0.05	13.3	0.4	2.6	7.8	0.0	2.2	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
OrfB_Zn_ribbon	PF07282.6	gi|332796958|ref|YP_004458458.1|	-	0.06	13.0	1.1	0.24	11.0	0.8	1.9	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_4	PF13717.1	gi|332796958|ref|YP_004458458.1|	-	0.063	12.9	3.5	1.3	8.7	2.4	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF1610	PF07754.6	gi|332796958|ref|YP_004458458.1|	-	0.072	13.2	5.9	2.8	8.1	0.5	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zinc-ribbons_6	PF07191.7	gi|332796958|ref|YP_004458458.1|	-	0.073	12.8	0.3	0.16	11.7	0.2	1.6	1	1	0	1	1	1	0	zinc-ribbons
DUF164	PF02591.10	gi|332796958|ref|YP_004458458.1|	-	0.076	12.8	0.4	1.5	8.7	0.0	2.1	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
HypA	PF01155.14	gi|332796958|ref|YP_004458458.1|	-	0.081	12.6	0.2	0.099	12.3	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Acetone_carb_G	PF08882.6	gi|332796958|ref|YP_004458458.1|	-	0.093	12.7	1.0	10	6.2	0.0	2.1	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
zf-DNA_Pol	PF08996.5	gi|332796958|ref|YP_004458458.1|	-	0.14	11.5	0.3	0.15	11.4	0.2	1.1	1	0	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
tRNA-synt_1f	PF01921.13	gi|332796958|ref|YP_004458458.1|	-	0.15	10.7	0.1	0.16	10.6	0.1	1.0	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
TFIIS_C	PF01096.13	gi|332796958|ref|YP_004458458.1|	-	0.16	11.6	3.7	0.75	9.4	2.5	1.9	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
Ogr_Delta	PF04606.7	gi|332796958|ref|YP_004458458.1|	-	0.17	11.5	3.7	1.8	8.2	2.6	2.1	1	1	0	1	1	1	0	Ogr/Delta-like	zinc	finger
zf-Mss51	PF13824.1	gi|332796958|ref|YP_004458458.1|	-	0.17	11.7	2.1	3.6	7.5	1.6	2.1	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
TerY-C	PF15616.1	gi|332796958|ref|YP_004458458.1|	-	0.22	11.4	1.5	4.4	7.2	0.1	2.1	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
Prok-RING_4	PF14447.1	gi|332796958|ref|YP_004458458.1|	-	0.24	10.9	1.1	2.9	7.4	0.0	2.1	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	4
Auto_anti-p27	PF06677.7	gi|332796958|ref|YP_004458458.1|	-	0.32	10.8	2.8	10	5.9	0.2	2.3	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-CSL	PF05207.8	gi|332796958|ref|YP_004458458.1|	-	0.37	10.3	2.3	0.75	9.3	0.1	2.0	1	1	1	2	2	2	0	CSL	zinc	finger
zf-C3HC4_3	PF13920.1	gi|332796958|ref|YP_004458458.1|	-	0.41	10.3	1.9	1.3	8.7	1.3	1.7	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF2296	PF10058.4	gi|332796958|ref|YP_004458458.1|	-	0.66	9.7	3.6	4.4	7.1	2.5	2.1	1	1	0	1	1	1	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
PALP	PF00291.20	gi|332796960|ref|YP_004458460.1|	-	2.2e-52	178.2	0.0	2.7e-52	177.8	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Peptidase_S51	PF03575.12	gi|332796960|ref|YP_004458460.1|	-	0.11	12.2	0.0	0.26	11.0	0.0	1.6	2	0	0	2	2	2	0	Peptidase	family	S51
TusA	PF01206.12	gi|332796961|ref|YP_004458461.1|	-	3e-07	29.9	0.0	3.6e-07	29.6	0.0	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
HA	PF03457.9	gi|332796961|ref|YP_004458461.1|	-	0.015	15.4	0.0	0.02	14.9	0.0	1.2	1	0	0	1	1	1	0	Helicase	associated	domain
DUF1923	PF09083.5	gi|332796961|ref|YP_004458461.1|	-	0.046	13.1	0.4	0.18	11.3	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1923)
DrsE_2	PF13686.1	gi|332796962|ref|YP_004458462.1|	-	2.1e-13	50.3	0.3	2.8e-12	46.6	0.2	1.9	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|332796962|ref|YP_004458462.1|	-	0.00071	19.6	0.0	0.00094	19.2	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DUF2833	PF11090.3	gi|332796962|ref|YP_004458462.1|	-	0.0052	16.9	0.1	0.0081	16.2	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2833)
DUF711	PF05167.7	gi|332796963|ref|YP_004458463.1|	-	3.5e-69	233.4	0.0	4.2e-69	233.1	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
KdpD	PF02702.12	gi|332796963|ref|YP_004458463.1|	-	0.021	13.9	0.2	0.037	13.1	0.1	1.3	1	0	0	1	1	1	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
Antitoxin-MazE	PF04014.13	gi|332796964|ref|YP_004458464.1|	-	1.2e-08	34.4	0.0	3.7e-08	32.9	0.0	1.8	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|332796964|ref|YP_004458464.1|	-	0.00043	20.6	2.8	0.00043	20.6	1.9	2.4	2	0	0	2	2	2	1	PhoU	domain
RICTOR_M	PF14666.1	gi|332796964|ref|YP_004458464.1|	-	0.011	14.7	0.5	0.011	14.7	0.4	1.8	2	0	0	2	2	2	0	Rapamycin-insensitive	companion	of	mTOR,	middle	domain
QRPTase_C	PF01729.14	gi|332796965|ref|YP_004458465.1|	-	7.7e-24	84.1	0.0	1e-23	83.6	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|332796965|ref|YP_004458465.1|	-	0.0024	17.6	0.0	0.0044	16.8	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribosomal_S19e	PF01090.14	gi|332796966|ref|YP_004458466.1|	-	7.8e-46	154.9	0.0	8.9e-46	154.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
dsDNA_bind	PF01984.15	gi|332796967|ref|YP_004458467.1|	-	6.1e-29	100.1	11.8	7.5e-29	99.8	8.2	1.1	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
SurA_N	PF09312.6	gi|332796967|ref|YP_004458467.1|	-	0.013	15.3	2.0	0.015	15.1	0.7	1.5	1	1	0	1	1	1	0	SurA	N-terminal	domain
Radial_spoke_3	PF06098.6	gi|332796967|ref|YP_004458467.1|	-	0.38	9.7	8.0	0.42	9.5	5.5	1.1	1	0	0	1	1	1	0	Radial	spoke	protein	3
DUF4085	PF13315.1	gi|332796967|ref|YP_004458467.1|	-	0.86	8.9	4.3	2.1	7.6	2.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4085)
Ribosomal_L39	PF00832.15	gi|332796968|ref|YP_004458468.1|	-	4.4e-22	77.2	6.6	5e-22	77.0	4.6	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
Ribosomal_L31e	PF01198.14	gi|332796969|ref|YP_004458469.1|	-	2.5e-13	49.4	0.4	3.1e-13	49.1	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
KaiC	PF06745.8	gi|332796969|ref|YP_004458469.1|	-	0.0024	17.0	0.4	0.0025	16.9	0.3	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|332796969|ref|YP_004458469.1|	-	0.14	11.5	0.0	0.16	11.3	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
eIF-6	PF01912.13	gi|332796970|ref|YP_004458470.1|	-	5.9e-74	247.4	5.6	7.1e-74	247.1	3.9	1.1	1	0	0	1	1	1	1	eIF-6	family
Ribosomal_L18ae	PF01775.12	gi|332796971|ref|YP_004458471.1|	-	1.7e-09	37.6	1.5	1.4e-08	34.6	0.5	1.9	1	1	1	2	2	2	2	Ribosomal	L18ae/LX	protein	domain
Prefoldin	PF02996.12	gi|332796972|ref|YP_004458472.1|	-	2e-20	72.6	5.7	2.9e-20	72.1	3.9	1.2	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.15	gi|332796972|ref|YP_004458472.1|	-	0.04	13.6	9.4	0.35	10.6	0.7	2.4	2	0	0	2	2	2	0	Prefoldin	subunit
HrpA_pilin	PF09589.5	gi|332796972|ref|YP_004458472.1|	-	0.05	14.0	0.0	0.11	12.9	0.0	1.6	1	1	0	1	1	1	0	HrpA	pilus	formation	protein
Mod_r	PF07200.8	gi|332796972|ref|YP_004458472.1|	-	0.084	12.7	6.4	0.6	10.0	0.9	2.2	2	0	0	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
MCC-bdg_PDZ	PF10506.4	gi|332796972|ref|YP_004458472.1|	-	0.086	12.6	2.0	0.62	9.9	0.1	2.7	3	0	0	3	3	3	0	PDZ	domain	of	MCC-2	bdg	protein	for	Usher	syndrome
DUF4430	PF14478.1	gi|332796972|ref|YP_004458472.1|	-	0.088	12.8	0.2	0.21	11.6	0.0	1.9	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4430)
GAS	PF13851.1	gi|332796972|ref|YP_004458472.1|	-	0.46	9.6	10.0	0.23	10.6	1.9	2.0	2	0	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Spc7	PF08317.6	gi|332796972|ref|YP_004458472.1|	-	0.91	8.1	9.1	0.68	8.5	1.4	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
COG5	PF10392.4	gi|332796972|ref|YP_004458472.1|	-	1.6	8.6	8.9	0.25	11.3	2.8	1.8	2	0	0	2	2	2	0	Golgi	transport	complex	subunit	5
Baculo_PEP_C	PF04513.7	gi|332796972|ref|YP_004458472.1|	-	2.6	7.8	6.7	6.6	6.5	0.4	2.1	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
IncA	PF04156.9	gi|332796972|ref|YP_004458472.1|	-	3.1	7.3	10.1	1.6	8.2	2.7	2.1	2	0	0	2	2	2	0	IncA	protein
Seryl_tRNA_N	PF02403.17	gi|332796972|ref|YP_004458472.1|	-	3.4	7.7	11.2	1.6	8.8	1.9	2.2	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
LMP	PF04778.7	gi|332796972|ref|YP_004458472.1|	-	5.5	6.7	10.6	6.2	6.5	1.1	2.7	2	1	1	3	3	3	0	LMP	repeated	region
Fib_alpha	PF08702.5	gi|332796972|ref|YP_004458472.1|	-	6.5	6.8	6.3	6.9	6.7	0.4	2.1	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
BLOC1_2	PF10046.4	gi|332796972|ref|YP_004458472.1|	-	7.1	6.8	10.8	6.5	6.9	1.9	2.3	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Med2	PF11214.3	gi|332796972|ref|YP_004458472.1|	-	7.4	6.6	8.5	27	4.8	1.0	2.7	1	1	1	2	2	2	0	Mediator	complex	subunit	2
SRP54	PF00448.17	gi|332796973|ref|YP_004458473.1|	-	3e-75	252.0	0.2	4.1e-75	251.5	0.1	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|332796973|ref|YP_004458473.1|	-	5.3e-11	42.4	8.0	5.3e-11	42.4	5.6	2.0	2	1	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
cobW	PF02492.14	gi|332796973|ref|YP_004458473.1|	-	3.1e-07	29.9	0.3	5.4e-07	29.2	0.2	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|332796973|ref|YP_004458473.1|	-	4.6e-07	30.0	0.5	2.8e-06	27.5	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|332796973|ref|YP_004458473.1|	-	1.3e-06	27.3	0.0	0.00077	18.3	0.0	2.2	2	0	0	2	2	2	2	ArgK	protein
MobB	PF03205.9	gi|332796973|ref|YP_004458473.1|	-	1.1e-05	25.0	0.5	5.2e-05	22.9	0.1	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.18	gi|332796973|ref|YP_004458473.1|	-	3.6e-05	23.2	5.3	3.6e-05	23.2	3.6	2.7	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_30	PF13604.1	gi|332796973|ref|YP_004458473.1|	-	7.8e-05	22.3	0.0	0.00011	21.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|332796973|ref|YP_004458473.1|	-	0.00011	22.3	2.3	0.00025	21.2	0.1	2.7	2	2	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|332796973|ref|YP_004458473.1|	-	0.00065	19.4	5.3	0.034	13.8	0.3	3.0	1	1	2	3	3	3	1	NTPase
AAA_14	PF13173.1	gi|332796973|ref|YP_004458473.1|	-	0.0012	18.7	0.9	0.026	14.4	0.0	2.4	1	1	1	2	2	2	1	AAA	domain
TAFH	PF07531.9	gi|332796973|ref|YP_004458473.1|	-	0.0013	18.3	0.9	0.0061	16.1	0.1	2.2	1	1	1	2	2	2	1	NHR1	homology	to	TAF
AAA_33	PF13671.1	gi|332796973|ref|YP_004458473.1|	-	0.0013	18.6	0.0	0.0031	17.4	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|332796973|ref|YP_004458473.1|	-	0.003	16.6	0.4	0.012	14.6	0.1	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
RecA	PF00154.16	gi|332796973|ref|YP_004458473.1|	-	0.0031	16.6	0.1	0.0046	16.0	0.1	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
DUF445	PF04286.7	gi|332796973|ref|YP_004458473.1|	-	0.0097	15.4	5.8	0.014	14.9	4.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF445)
Peripla_BP_4	PF13407.1	gi|332796973|ref|YP_004458473.1|	-	0.013	14.8	3.3	1	8.6	0.2	2.7	2	1	0	3	3	3	0	Periplasmic	binding	protein	domain
APS_kinase	PF01583.15	gi|332796973|ref|YP_004458473.1|	-	0.014	15.0	0.0	0.039	13.6	0.0	1.7	1	0	0	1	1	1	0	Adenylylsulphate	kinase
Glyco_trans_4_2	PF13477.1	gi|332796973|ref|YP_004458473.1|	-	0.021	14.6	0.1	0.071	12.9	0.0	2.0	2	0	0	2	2	1	0	Glycosyl	transferase	4-like
AAA_10	PF12846.2	gi|332796973|ref|YP_004458473.1|	-	0.025	14.0	0.4	0.094	12.1	0.0	2.0	2	0	0	2	2	2	0	AAA-like	domain
DUF2075	PF09848.4	gi|332796973|ref|YP_004458473.1|	-	0.025	13.5	0.3	0.058	12.3	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
DUF3919	PF13057.1	gi|332796973|ref|YP_004458473.1|	-	0.027	13.9	3.8	0.043	13.2	2.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3919)
Thymidylate_kin	PF02223.12	gi|332796973|ref|YP_004458473.1|	-	0.027	13.8	0.2	0.089	12.1	0.0	1.9	2	0	0	2	2	2	0	Thymidylate	kinase
DUF258	PF03193.11	gi|332796973|ref|YP_004458473.1|	-	0.03	13.4	0.0	0.059	12.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Fer4_NifH	PF00142.13	gi|332796973|ref|YP_004458473.1|	-	0.046	12.9	0.8	0.074	12.2	0.1	1.8	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_17	PF13207.1	gi|332796973|ref|YP_004458473.1|	-	0.048	14.4	4.5	0.076	13.8	0.3	2.8	2	1	0	2	2	2	0	AAA	domain
KdpD	PF02702.12	gi|332796973|ref|YP_004458473.1|	-	0.086	11.9	1.5	0.15	11.2	0.1	2.1	2	1	0	2	2	2	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
AAA_19	PF13245.1	gi|332796973|ref|YP_004458473.1|	-	0.086	12.5	0.1	0.21	11.3	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
NB-ARC	PF00931.17	gi|332796973|ref|YP_004458473.1|	-	0.09	11.6	1.8	0.29	9.9	0.1	2.2	1	1	1	2	2	2	0	NB-ARC	domain
AAA_16	PF13191.1	gi|332796973|ref|YP_004458473.1|	-	0.1	12.5	0.2	0.37	10.7	0.0	2.0	1	1	1	2	2	2	0	AAA	ATPase	domain
Glyco_transf_4	PF13439.1	gi|332796973|ref|YP_004458473.1|	-	0.1	12.2	0.0	2.5	7.7	0.0	2.1	1	1	1	2	2	2	0	Glycosyltransferase	Family	4
NACHT	PF05729.7	gi|332796973|ref|YP_004458473.1|	-	0.11	12.0	0.1	1.1	8.9	0.0	2.3	2	0	0	2	2	2	0	NACHT	domain
AAA_28	PF13521.1	gi|332796973|ref|YP_004458473.1|	-	0.12	12.3	0.1	0.3	11.0	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
PNPase	PF03726.9	gi|332796973|ref|YP_004458473.1|	-	0.15	12.3	3.2	0.19	11.9	1.0	2.1	1	1	1	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
Lambda_CIII	PF02061.11	gi|332796974|ref|YP_004458474.1|	-	0.013	15.4	0.3	0.018	14.9	0.2	1.2	1	0	0	1	1	1	0	Lambda	Phage	CIII
SecE	PF00584.15	gi|332796974|ref|YP_004458474.1|	-	0.017	14.6	0.8	0.02	14.4	0.6	1.1	1	0	0	1	1	1	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Spt5-NGN	PF03439.8	gi|332796975|ref|YP_004458475.1|	-	1e-23	82.8	0.1	3.7e-23	81.0	0.0	1.8	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|332796975|ref|YP_004458475.1|	-	5.9e-07	28.9	2.3	1.3e-06	27.8	0.5	2.3	2	0	0	2	2	2	1	KOW	motif
NusG	PF02357.14	gi|332796975|ref|YP_004458475.1|	-	0.00048	20.3	0.2	0.0031	17.7	0.0	2.3	2	1	0	2	2	2	1	Transcription	termination	factor	nusG
Ribosomal_L11_N	PF03946.9	gi|332796976|ref|YP_004458476.1|	-	6.8e-21	73.4	1.3	1.3e-20	72.6	0.9	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|332796976|ref|YP_004458476.1|	-	4.1e-20	71.6	1.6	7.6e-20	70.8	1.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L1	PF00687.16	gi|332796977|ref|YP_004458477.1|	-	1.1e-36	126.2	2.6	1.3e-36	125.9	1.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L10	PF00466.15	gi|332796978|ref|YP_004458478.1|	-	1.2e-26	92.5	1.5	3.2e-26	91.1	1.1	1.7	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_60s	PF00428.14	gi|332796978|ref|YP_004458478.1|	-	0.0027	18.0	10.8	0.0052	17.1	7.4	1.7	1	1	0	1	1	1	1	60s	Acidic	ribosomal	protein
GldM_N	PF12081.3	gi|332796978|ref|YP_004458478.1|	-	0.076	12.5	2.7	1.3	8.5	0.8	2.3	2	0	0	2	2	2	0	GldM	N-terminal	domain
PAXNEB	PF05625.6	gi|332796978|ref|YP_004458478.1|	-	0.17	10.6	1.0	0.42	9.3	0.1	1.8	2	0	0	2	2	2	0	PAXNEB	protein
Ribosomal_60s	PF00428.14	gi|332796979|ref|YP_004458479.1|	-	2.3e-20	72.7	14.4	2.6e-20	72.5	10.0	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|332796979|ref|YP_004458479.1|	-	0.0036	17.1	2.7	1.5	8.7	0.7	2.2	2	0	0	2	2	2	2	Peptidase	propeptide	and	YPEB	domain
Pox_Ag35	PF03286.9	gi|332796979|ref|YP_004458479.1|	-	0.052	13.0	1.0	0.062	12.8	0.7	1.1	1	0	0	1	1	1	0	Pox	virus	Ag35	surface	protein
DUF3484	PF11983.3	gi|332796979|ref|YP_004458479.1|	-	0.053	14.3	0.1	0.077	13.8	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3484)
LIN37	PF15306.1	gi|332796979|ref|YP_004458479.1|	-	0.07	13.1	0.5	0.075	13.0	0.3	1.1	1	0	0	1	1	1	0	LIN37
DUF4424	PF14415.1	gi|332796979|ref|YP_004458479.1|	-	0.074	12.5	0.9	0.089	12.2	0.6	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4424)
tRNA-synt_2c	PF01411.14	gi|332796980|ref|YP_004458480.1|	-	3.7e-117	391.9	0.0	5.1e-117	391.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|332796980|ref|YP_004458480.1|	-	1.6e-14	53.5	0.3	3.5e-14	52.4	0.2	1.6	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2e	PF02091.10	gi|332796980|ref|YP_004458480.1|	-	0.0096	15.0	0.0	0.021	13.9	0.0	1.5	1	0	0	1	1	1	1	Glycyl-tRNA	synthetase	alpha	subunit
DHHA1	PF02272.14	gi|332796980|ref|YP_004458480.1|	-	0.022	14.4	0.3	0.051	13.2	0.2	1.7	1	0	0	1	1	1	0	DHHA1	domain
DUF434	PF04256.7	gi|332796981|ref|YP_004458481.1|	-	7.1e-25	86.1	1.0	1.1e-24	85.4	0.7	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF434)
AdoMet_dc	PF02675.10	gi|332796982|ref|YP_004458482.1|	-	3e-34	117.0	0.0	3.4e-34	116.9	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
YbaB_DNA_bd	PF02575.11	gi|332796982|ref|YP_004458482.1|	-	0.0063	16.3	0.0	0.0099	15.7	0.0	1.3	1	0	0	1	1	1	1	YbaB/EbfC	DNA-binding	family
ACP_syn_III_C	PF08541.5	gi|332796983|ref|YP_004458483.1|	-	1.8e-09	37.5	0.0	2.3e-08	33.9	0.0	2.4	2	1	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
ACP_syn_III	PF08545.5	gi|332796983|ref|YP_004458483.1|	-	8.7e-06	25.3	2.4	1.3e-05	24.7	0.7	1.9	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
HMG_CoA_synt_C	PF08540.5	gi|332796983|ref|YP_004458483.1|	-	0.00012	21.7	0.1	0.017	14.5	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
HMG_CoA_synt_N	PF01154.12	gi|332796983|ref|YP_004458483.1|	-	0.00065	19.3	0.0	0.0012	18.4	0.0	1.3	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
FAE1_CUT1_RppA	PF08392.7	gi|332796983|ref|YP_004458483.1|	-	0.021	13.8	0.0	0.05	12.6	0.0	1.5	2	0	0	2	2	2	0	FAE1/Type	III	polyketide	synthase-like	protein
ACP_syn_III	PF08545.5	gi|332796984|ref|YP_004458484.1|	-	8.8e-06	25.2	0.2	0.0036	16.9	0.0	2.8	2	1	1	3	3	3	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|332796984|ref|YP_004458484.1|	-	0.0058	15.6	0.1	0.048	12.6	0.0	2.1	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|332796984|ref|YP_004458484.1|	-	0.014	14.7	0.0	0.027	13.9	0.0	1.4	1	0	0	1	1	1	0	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|332796984|ref|YP_004458484.1|	-	0.015	14.7	0.2	0.035	13.6	0.0	1.6	2	0	0	2	2	2	0	Beta-ketoacyl	synthase,	N-terminal	domain
DUF35	PF01796.12	gi|332796985|ref|YP_004458485.1|	-	3.7e-12	46.3	0.0	4.8e-12	45.9	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|332796985|ref|YP_004458485.1|	-	8.2e-06	25.5	0.0	1.3e-05	24.9	0.0	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DZR	PF12773.2	gi|332796985|ref|YP_004458485.1|	-	0.033	14.0	1.4	0.051	13.4	1.0	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF1258	PF06869.7	gi|332796985|ref|YP_004458485.1|	-	0.051	12.6	0.3	0.07	12.2	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1258)
DUF2039	PF10217.4	gi|332796985|ref|YP_004458485.1|	-	0.069	13.1	0.6	0.11	12.5	0.4	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2039)
TFIIS_C	PF01096.13	gi|332796985|ref|YP_004458485.1|	-	0.46	10.1	1.9	19	4.9	0.0	2.5	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
Zn_Tnp_IS1595	PF12760.2	gi|332796985|ref|YP_004458485.1|	-	0.53	10.1	2.4	2.9	7.7	0.1	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|332796985|ref|YP_004458485.1|	-	1	9.4	3.2	9	6.3	2.2	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|332796985|ref|YP_004458485.1|	-	1.1	9.1	4.5	5	7.0	3.1	2.1	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
A2L_zn_ribbon	PF08792.5	gi|332796985|ref|YP_004458485.1|	-	1.1	8.8	4.0	4.4	6.8	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
HMG-CoA_red	PF00368.13	gi|332796986|ref|YP_004458486.1|	-	3.7e-144	479.9	1.9	4.5e-144	479.7	1.3	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
FIST_C	PF10442.4	gi|332796986|ref|YP_004458486.1|	-	0.053	13.4	0.0	0.099	12.5	0.0	1.5	1	0	0	1	1	1	0	FIST	C	domain
Fic	PF02661.13	gi|332796986|ref|YP_004458486.1|	-	0.08	13.6	0.0	0.19	12.4	0.0	1.6	1	0	0	1	1	1	0	Fic/DOC	family
Adeno_terminal	PF02459.10	gi|332796986|ref|YP_004458486.1|	-	0.084	11.0	0.0	0.11	10.6	0.0	1.2	1	0	0	1	1	1	0	Adenoviral	DNA	terminal	protein
AF2331-like	PF14556.1	gi|332796986|ref|YP_004458486.1|	-	0.13	12.6	0.2	0.66	10.3	0.0	2.1	2	0	0	2	2	2	0	AF2331-like
SHMT	PF00464.14	gi|332796987|ref|YP_004458487.1|	-	1.7e-68	230.8	0.0	2.1e-68	230.5	0.0	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.16	gi|332796987|ref|YP_004458487.1|	-	1.6e-09	37.2	0.0	6.6e-09	35.1	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|332796987|ref|YP_004458487.1|	-	1.6e-08	34.0	0.0	2.1e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|332796987|ref|YP_004458487.1|	-	1.1e-05	24.3	0.1	0.00021	20.1	0.1	2.2	1	1	0	1	1	1	1	Aminotransferase	class-V
SelA	PF03841.8	gi|332796987|ref|YP_004458487.1|	-	0.032	12.9	0.0	0.084	11.5	0.0	1.7	1	1	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
DUF3469	PF11952.3	gi|332796987|ref|YP_004458487.1|	-	0.066	12.9	0.2	0.8	9.4	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3469)
Usp	PF00582.21	gi|332796988|ref|YP_004458488.1|	-	5.2e-20	72.0	0.2	1.1e-19	71.0	0.1	1.4	1	1	0	1	1	1	1	Universal	stress	protein	family
ETF	PF01012.16	gi|332796988|ref|YP_004458488.1|	-	0.13	11.9	0.0	0.31	10.7	0.0	1.7	1	1	0	1	1	1	0	Electron	transfer	flavoprotein	domain
Gp_dh_N	PF00044.19	gi|332796989|ref|YP_004458489.1|	-	1.4e-19	70.5	0.8	4.1e-19	69.0	0.5	1.9	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.15	gi|332796989|ref|YP_004458489.1|	-	1.6e-19	69.9	0.9	2.3e-19	69.3	0.6	1.2	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|332796989|ref|YP_004458489.1|	-	3.2e-12	46.4	0.4	9.2e-12	44.9	0.2	1.9	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.17	gi|332796989|ref|YP_004458489.1|	-	2.7e-05	24.6	0.9	0.00016	22.2	0.0	2.4	2	1	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_3	PF03447.11	gi|332796989|ref|YP_004458489.1|	-	0.00011	22.5	0.0	0.00083	19.7	0.0	2.3	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|332796989|ref|YP_004458489.1|	-	0.00086	19.6	0.2	0.0021	18.3	0.0	1.8	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|332796989|ref|YP_004458489.1|	-	0.0013	17.9	1.4	0.27	10.3	0.1	3.1	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|332796989|ref|YP_004458489.1|	-	0.0084	15.9	2.7	0.048	13.4	0.2	2.7	2	2	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
HIN	PF02760.10	gi|332796989|ref|YP_004458489.1|	-	0.013	14.9	0.2	0.026	13.8	0.1	1.5	1	0	0	1	1	1	0	HIN-200/IF120x	domain
Herpes_UL33	PF03581.8	gi|332796989|ref|YP_004458489.1|	-	0.081	12.8	2.2	0.55	10.1	0.1	2.9	2	2	1	3	3	3	0	Herpesvirus	UL33-like	protein
TROVE	PF05731.6	gi|332796989|ref|YP_004458489.1|	-	0.089	11.5	0.0	0.14	10.8	0.0	1.2	1	0	0	1	1	1	0	TROVE	domain
ThiF	PF00899.16	gi|332796989|ref|YP_004458489.1|	-	0.14	11.9	3.7	0.97	9.2	0.0	3.3	2	2	2	4	4	4	0	ThiF	family
PGK	PF00162.14	gi|332796990|ref|YP_004458490.1|	-	2.6e-85	286.3	0.2	2.9e-85	286.1	0.1	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
HTH_38	PF13936.1	gi|332796992|ref|YP_004458492.1|	-	0.002	17.6	0.1	0.0035	16.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|332796992|ref|YP_004458492.1|	-	0.0059	16.2	0.0	0.01	15.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|332796992|ref|YP_004458492.1|	-	0.0078	16.1	0.8	0.0093	15.9	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
EcoR124_C	PF12008.3	gi|332796992|ref|YP_004458492.1|	-	0.026	13.7	0.3	0.036	13.2	0.2	1.3	1	1	0	1	1	1	0	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
DUF1474	PF07342.6	gi|332796992|ref|YP_004458492.1|	-	0.03	14.5	0.8	0.046	13.9	0.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1474)
HTH_29	PF13551.1	gi|332796992|ref|YP_004458492.1|	-	0.032	14.3	0.0	0.041	14.0	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF2316	PF10078.4	gi|332796992|ref|YP_004458492.1|	-	0.036	14.0	0.0	0.065	13.2	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
MADF_DNA_bdg	PF10545.4	gi|332796992|ref|YP_004458492.1|	-	0.039	14.1	0.1	0.066	13.4	0.1	1.4	1	0	0	1	1	1	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
DUF3990	PF13151.1	gi|332796992|ref|YP_004458492.1|	-	0.077	12.3	0.3	0.09	12.1	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3990)
TCTP	PF00838.12	gi|332796992|ref|YP_004458492.1|	-	0.086	12.8	0.3	0.094	12.7	0.2	1.2	1	0	0	1	1	1	0	Translationally	controlled	tumour	protein
DUF746	PF05344.6	gi|332796992|ref|YP_004458492.1|	-	0.14	11.6	0.0	0.23	11.0	0.0	1.3	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF746)
DUF3093	PF11292.3	gi|332796993|ref|YP_004458493.1|	-	3.7	7.3	7.3	0.48	10.2	1.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3093)
DUF104	PF01954.11	gi|332796994|ref|YP_004458494.1|	-	0.00011	22.1	10.2	0.1	12.6	0.0	3.2	2	1	1	3	3	3	2	Protein	of	unknown	function	DUF104
tRNA_anti-codon	PF01336.20	gi|332796994|ref|YP_004458494.1|	-	0.0016	18.2	1.6	0.25	11.2	0.0	2.9	1	1	1	3	3	3	1	OB-fold	nucleic	acid	binding	domain
NUMOD1	PF07453.8	gi|332796994|ref|YP_004458494.1|	-	0.0016	18.1	1.8	0.085	12.7	0.0	3.0	3	0	0	3	3	3	1	NUMOD1	domain
SPOR	PF05036.8	gi|332796994|ref|YP_004458494.1|	-	0.0025	17.9	0.2	0.81	9.8	0.0	2.9	2	1	1	3	3	3	1	Sporulation	related	domain
DUF2097	PF09870.4	gi|332796994|ref|YP_004458494.1|	-	0.0029	17.6	2.4	0.66	10.0	0.1	3.0	3	0	0	3	3	3	1	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
Phage_tail_2	PF06199.6	gi|332796994|ref|YP_004458494.1|	-	0.0045	17.0	1.8	1.9	8.5	0.3	2.9	1	1	1	2	2	2	1	Phage	major	tail	protein	2
CBS	PF00571.23	gi|332796994|ref|YP_004458494.1|	-	0.017	14.9	1.7	5	6.9	0.0	2.5	2	0	0	2	2	2	0	CBS	domain
DUF3916	PF13079.1	gi|332796994|ref|YP_004458494.1|	-	0.029	14.0	0.5	0.88	9.2	0.0	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3916)
DUF2188	PF09954.4	gi|332796994|ref|YP_004458494.1|	-	0.03	14.2	0.4	31	4.5	0.0	3.0	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2188)
Aconitase_2_N	PF06434.8	gi|332796994|ref|YP_004458494.1|	-	0.036	13.4	0.4	0.051	12.9	0.2	1.4	1	1	0	1	1	1	0	Aconitate	hydratase	2	N-terminus
DUF3659	PF12396.3	gi|332796994|ref|YP_004458494.1|	-	0.058	13.0	3.4	14	5.4	0.2	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3659)
DnaJ	PF00226.26	gi|332796994|ref|YP_004458494.1|	-	0.059	13.1	0.1	0.19	11.5	0.0	1.8	1	0	0	1	1	1	0	DnaJ	domain
Toxin_46	PF15526.1	gi|332796994|ref|YP_004458494.1|	-	0.11	12.7	1.3	1.4	9.1	0.2	2.1	1	1	1	2	2	2	0	Putative	toxin	46
SNase	PF00565.12	gi|332796994|ref|YP_004458494.1|	-	0.11	12.7	3.2	0.6	10.3	0.4	2.1	1	1	1	2	2	2	0	Staphylococcal	nuclease	homologue
FKBP_C	PF00254.23	gi|332796994|ref|YP_004458494.1|	-	0.17	11.9	4.4	9.2	6.3	0.7	2.9	1	1	1	2	2	2	0	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
DUF4342	PF14242.1	gi|332796994|ref|YP_004458494.1|	-	0.33	10.7	5.5	1.4	8.7	0.4	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4342)
DUF3680	PF12441.3	gi|332796994|ref|YP_004458494.1|	-	0.37	10.6	3.0	4	7.3	0.1	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3680)
Asp_protease_2	PF13650.1	gi|332796995|ref|YP_004458495.1|	-	0.041	14.3	0.0	0.044	14.2	0.0	1.2	1	0	0	1	1	1	0	Aspartyl	protease
Myb_DNA-bind_4	PF13837.1	gi|332796996|ref|YP_004458496.1|	-	0.0026	17.8	0.2	0.0026	17.8	0.2	1.1	1	0	0	1	1	1	1	Myb/SANT-like	DNA-binding	domain
DUF3215	PF11503.3	gi|332796996|ref|YP_004458496.1|	-	0.062	12.9	0.0	0.064	12.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3215)
TaqI_C	PF12950.2	gi|332796999|ref|YP_004458499.1|	-	0.18	11.5	1.6	0.45	10.2	0.1	1.9	1	1	0	2	2	2	0	TaqI-like	C-terminal	specificity	domain
NfeD	PF01957.13	gi|332796999|ref|YP_004458499.1|	-	0.4	10.8	2.7	0.52	10.4	1.1	1.6	2	0	0	2	2	2	0	NfeD-like	C-terminal,	partner-binding
UPF0051	PF01458.12	gi|332797000|ref|YP_004458500.1|	-	1.6e-44	152.0	0.7	2.1e-44	151.6	0.5	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|332797001|ref|YP_004458501.1|	-	4.2e-61	206.3	0.0	5.6e-61	205.9	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|332797002|ref|YP_004458502.1|	-	7.9e-23	81.2	0.1	1.1e-22	80.8	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797002|ref|YP_004458502.1|	-	6e-11	42.8	0.2	7.9e-10	39.1	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|332797002|ref|YP_004458502.1|	-	2.7e-08	33.3	0.4	6.6e-08	32.0	0.3	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|332797002|ref|YP_004458502.1|	-	0.0013	18.2	0.2	0.0027	17.1	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|332797002|ref|YP_004458502.1|	-	0.0021	18.3	1.7	0.0035	17.6	1.2	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|332797002|ref|YP_004458502.1|	-	0.0032	15.9	0.6	0.025	13.0	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|332797002|ref|YP_004458502.1|	-	0.0035	16.7	0.0	0.0072	15.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|332797002|ref|YP_004458502.1|	-	0.024	14.5	0.2	0.15	12.0	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|332797002|ref|YP_004458502.1|	-	0.025	13.7	0.1	0.044	12.9	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
MutS_V	PF00488.16	gi|332797002|ref|YP_004458502.1|	-	0.051	12.9	0.1	3.7	6.9	0.0	2.2	2	0	0	2	2	2	0	MutS	domain	V
Arch_ATPase	PF01637.13	gi|332797002|ref|YP_004458502.1|	-	0.053	13.2	0.1	0.097	12.3	0.1	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_17	PF13207.1	gi|332797002|ref|YP_004458502.1|	-	0.057	14.2	0.0	0.13	13.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|332797002|ref|YP_004458502.1|	-	0.07	13.0	0.0	0.089	12.6	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|332797002|ref|YP_004458502.1|	-	0.092	12.9	0.3	0.24	11.5	0.2	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.4	gi|332797002|ref|YP_004458502.1|	-	0.11	11.1	0.5	0.22	10.0	0.3	1.4	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
PHY	PF00360.15	gi|332797002|ref|YP_004458502.1|	-	0.14	11.2	0.0	0.28	10.3	0.0	1.4	1	0	0	1	1	1	0	Phytochrome	region
Antitoxin-MazE	PF04014.13	gi|332797003|ref|YP_004458503.1|	-	1.1e-08	34.5	0.1	2.7e-08	33.3	0.1	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PTR	PF12789.2	gi|332797003|ref|YP_004458503.1|	-	0.038	13.8	0.2	0.089	12.6	0.1	1.5	1	0	0	1	1	1	0	Phage	tail	repeat	like
PRD	PF00874.15	gi|332797003|ref|YP_004458503.1|	-	0.044	13.8	0.3	0.23	11.5	0.1	2.3	1	1	1	2	2	2	0	PRD	domain
Het-C	PF07217.6	gi|332797003|ref|YP_004458503.1|	-	0.38	8.8	3.4	0.47	8.5	2.3	1.1	1	0	0	1	1	1	0	Heterokaryon	incompatibility	protein	Het-C
DUF948	PF06103.6	gi|332797003|ref|YP_004458503.1|	-	5.3	6.9	8.1	3.4	7.5	1.1	3.3	2	1	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
CS	PF04969.11	gi|332797004|ref|YP_004458504.1|	-	0.016	15.7	2.8	0.071	13.6	1.8	2.0	1	1	0	1	1	1	0	CS	domain
HSP20	PF00011.16	gi|332797004|ref|YP_004458504.1|	-	0.037	13.8	3.8	0.09	12.6	0.3	2.5	2	1	0	2	2	2	0	Hsp20/alpha	crystallin	family
DUF4367	PF14285.1	gi|332797004|ref|YP_004458504.1|	-	0.072	12.3	3.0	0.081	12.2	2.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4367)
Anthrax_toxA	PF03497.11	gi|332797004|ref|YP_004458504.1|	-	0.12	12.1	0.9	0.17	11.6	0.6	1.5	1	1	0	1	1	1	0	Anthrax	toxin	LF	subunit
MutS_IV	PF05190.13	gi|332797004|ref|YP_004458504.1|	-	0.44	10.7	7.5	0.48	10.6	3.3	1.9	1	1	1	2	2	2	0	MutS	family	domain	IV
PAC2	PF09754.4	gi|332797005|ref|YP_004458505.1|	-	3.5e-37	128.3	0.1	4.4e-37	128.0	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
GCV_H	PF01597.14	gi|332797006|ref|YP_004458506.1|	-	3.9e-46	155.7	0.9	4.4e-46	155.5	0.6	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|332797006|ref|YP_004458506.1|	-	5.5e-05	22.7	0.1	0.00012	21.6	0.1	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|332797006|ref|YP_004458506.1|	-	0.004	16.7	0.5	0.28	10.8	0.0	2.4	1	1	1	2	2	2	1	Biotin-lipoyl	like
RnfC_N	PF13375.1	gi|332797006|ref|YP_004458506.1|	-	0.0069	16.0	0.1	0.011	15.4	0.0	1.3	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Peptidase_M23	PF01551.17	gi|332797006|ref|YP_004458506.1|	-	0.061	13.3	0.1	0.92	9.6	0.0	2.2	1	1	1	2	2	2	0	Peptidase	family	M23
GCV_T	PF01571.16	gi|332797007|ref|YP_004458507.1|	-	2.8e-52	177.1	0.0	3.7e-52	176.7	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|332797007|ref|YP_004458507.1|	-	6.6e-21	74.1	0.0	1.1e-20	73.4	0.0	1.4	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
DUF3970	PF13113.1	gi|332797007|ref|YP_004458507.1|	-	0.037	13.7	0.3	0.074	12.7	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3970)
GDC-P	PF02347.11	gi|332797008|ref|YP_004458508.1|	-	1.5e-122	409.4	0.0	1.8e-122	409.1	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|332797008|ref|YP_004458508.1|	-	2.9e-05	22.9	0.0	4.4e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|332797008|ref|YP_004458508.1|	-	0.01	14.1	0.3	0.029	12.6	0.0	1.7	2	0	0	2	2	2	0	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|332797008|ref|YP_004458508.1|	-	0.13	11.1	0.0	0.24	10.3	0.0	1.4	1	0	0	1	1	1	0	Aminotransferase	class	I	and	II
GDC-P	PF02347.11	gi|332797009|ref|YP_004458509.1|	-	2.3e-21	75.9	0.1	3.1e-19	68.9	0.0	2.0	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|332797009|ref|YP_004458509.1|	-	7.9e-08	31.4	0.1	4e-07	29.0	0.1	1.9	1	1	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|332797009|ref|YP_004458509.1|	-	0.0019	17.3	0.1	0.0031	16.7	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Peptidase_S24	PF00717.18	gi|332797010|ref|YP_004458510.1|	-	8.3e-06	25.3	0.2	1.3e-05	24.7	0.1	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
zf-ribbon_3	PF13248.1	gi|332797011|ref|YP_004458511.1|	-	0.00011	21.2	5.2	0.042	13.0	0.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332797011|ref|YP_004458511.1|	-	0.00013	21.3	3.3	0.001	18.4	2.3	2.1	1	1	0	1	1	1	1	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|332797011|ref|YP_004458511.1|	-	0.00015	21.0	4.2	0.17	11.2	0.0	3.1	3	0	0	3	3	3	2	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|332797011|ref|YP_004458511.1|	-	0.00058	19.5	5.2	0.0095	15.6	3.6	2.1	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
DZR	PF12773.2	gi|332797011|ref|YP_004458511.1|	-	0.00064	19.4	0.7	0.0019	17.9	0.5	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
CpXC	PF14353.1	gi|332797011|ref|YP_004458511.1|	-	0.0012	18.7	0.0	0.0019	18.1	0.0	1.2	1	0	0	1	1	1	1	CpXC	protein
zinc_ribbon_5	PF13719.1	gi|332797011|ref|YP_004458511.1|	-	0.0013	18.2	0.9	0.67	9.5	0.0	2.6	2	0	0	2	2	2	1	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|332797011|ref|YP_004458511.1|	-	0.0024	17.5	0.9	0.25	11.1	0.0	2.2	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
zf-ISL3	PF14690.1	gi|332797011|ref|YP_004458511.1|	-	0.0048	16.9	0.4	2.4	8.2	0.0	2.3	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-IS66	PF13005.2	gi|332797011|ref|YP_004458511.1|	-	0.0066	16.4	2.0	0.014	15.3	0.4	2.2	2	1	0	2	2	2	1	zinc-finger	binding	domain	of	transposase	IS66
DUF1610	PF07754.6	gi|332797011|ref|YP_004458511.1|	-	0.0072	16.4	10.6	0.073	13.1	1.7	2.4	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
Zn_Tnp_IS1595	PF12760.2	gi|332797011|ref|YP_004458511.1|	-	0.0079	15.9	0.3	2.1	8.1	0.0	2.2	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|332797011|ref|YP_004458511.1|	-	0.0094	15.6	2.3	1.8	8.3	0.1	2.7	2	1	0	2	2	2	1	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|332797011|ref|YP_004458511.1|	-	0.011	15.3	0.2	4.2	7.1	0.0	2.3	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Cren7	PF11520.3	gi|332797011|ref|YP_004458511.1|	-	0.016	14.8	0.2	0.034	13.7	0.1	1.6	1	1	0	1	1	1	0	Chromatin	protein	Cren7
A2L_zn_ribbon	PF08792.5	gi|332797011|ref|YP_004458511.1|	-	0.026	13.9	1.8	0.63	9.5	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|332797011|ref|YP_004458511.1|	-	0.028	14.3	1.7	2.5	8.1	0.2	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.6	gi|332797011|ref|YP_004458511.1|	-	0.035	13.6	1.4	6.1	6.4	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|332797011|ref|YP_004458511.1|	-	0.038	14.0	0.7	7.9	6.5	0.1	2.3	2	0	0	2	2	2	0	zinc-finger
FYDLN_acid	PF09538.5	gi|332797011|ref|YP_004458511.1|	-	0.038	14.5	0.1	3.9	8.0	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(FYDLN_acid)
TFIIS_C	PF01096.13	gi|332797011|ref|YP_004458511.1|	-	0.043	13.4	3.8	0.14	11.7	0.2	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-nanos	PF05741.8	gi|332797011|ref|YP_004458511.1|	-	0.047	13.6	1.1	0.35	10.8	0.8	2.1	1	1	0	1	1	1	0	Nanos	RNA	binding	domain
Nudix_N_2	PF14803.1	gi|332797011|ref|YP_004458511.1|	-	0.048	13.3	2.0	5.6	6.7	0.0	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
DUF1272	PF06906.6	gi|332797011|ref|YP_004458511.1|	-	0.055	13.3	0.7	5.3	6.9	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
DUF1936	PF09151.5	gi|332797011|ref|YP_004458511.1|	-	0.061	12.8	1.3	2.5	7.7	0.1	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
DUF2296	PF10058.4	gi|332797011|ref|YP_004458511.1|	-	0.12	12.1	2.2	3	7.6	0.2	2.4	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Prim_Zn_Ribbon	PF08273.7	gi|332797011|ref|YP_004458511.1|	-	0.15	12.1	2.0	10	6.2	0.0	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-TFIIB	PF13453.1	gi|332797011|ref|YP_004458511.1|	-	0.15	11.2	2.7	1.4	8.1	0.1	2.5	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Ogr_Delta	PF04606.7	gi|332797011|ref|YP_004458511.1|	-	0.15	11.7	1.3	12	5.6	0.0	2.2	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
DUF3039	PF11238.3	gi|332797011|ref|YP_004458511.1|	-	0.16	11.4	3.4	6.4	6.3	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3039)
Rubredoxin	PF00301.15	gi|332797011|ref|YP_004458511.1|	-	0.18	11.7	3.7	2.9	7.8	0.1	2.4	2	0	0	2	2	2	0	Rubredoxin
Ribosomal_L32p	PF01783.18	gi|332797011|ref|YP_004458511.1|	-	0.18	12.0	0.5	12	6.2	0.0	2.3	2	0	0	2	2	2	0	Ribosomal	L32p	protein	family
zf-HIT	PF04438.11	gi|332797011|ref|YP_004458511.1|	-	0.19	11.4	3.4	2.7	7.7	0.1	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
DUF164	PF02591.10	gi|332797011|ref|YP_004458511.1|	-	0.19	11.5	2.5	1.9	8.3	0.2	2.3	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
DUF4428	PF14471.1	gi|332797011|ref|YP_004458511.1|	-	0.24	11.1	2.4	8.4	6.2	0.2	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
DUF35_N	PF12172.3	gi|332797011|ref|YP_004458511.1|	-	0.24	11.3	0.8	26	4.9	0.0	2.5	3	0	0	3	3	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-H2C2_2	PF13465.1	gi|332797011|ref|YP_004458511.1|	-	0.39	11.0	1.5	3.1	8.2	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-FPG_IleRS	PF06827.9	gi|332797011|ref|YP_004458511.1|	-	0.41	10.3	3.8	9.2	6.0	0.1	2.6	3	0	0	3	3	2	0	Zinc	finger	found	in	FPG	and	IleRS
Auto_anti-p27	PF06677.7	gi|332797011|ref|YP_004458511.1|	-	0.45	10.3	2.8	18	5.2	0.1	2.4	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-tcix	PF14952.1	gi|332797011|ref|YP_004458511.1|	-	0.46	9.8	2.9	5.2	6.4	0.2	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Sgf11	PF08209.6	gi|332797011|ref|YP_004458511.1|	-	0.52	9.6	3.3	10	5.5	0.3	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
DNA_ligase_ZBD	PF03119.11	gi|332797011|ref|YP_004458511.1|	-	1.1	8.9	5.4	2.2	8.0	0.2	2.6	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DNA_RNApol_7kD	PF03604.8	gi|332797011|ref|YP_004458511.1|	-	1.7	8.2	4.2	15	5.1	0.2	2.4	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2	PF00096.21	gi|332797011|ref|YP_004458511.1|	-	2.7	8.5	4.2	29	5.2	0.9	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Enolase_C	PF00113.17	gi|332797012|ref|YP_004458512.1|	-	9.5e-99	330.0	0.3	1.3e-98	329.6	0.2	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|332797012|ref|YP_004458512.1|	-	3.2e-42	143.5	0.2	5.2e-42	142.9	0.1	1.3	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE	PF01188.16	gi|332797012|ref|YP_004458512.1|	-	0.006	17.0	0.0	0.012	16.1	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
DUF758	PF05527.6	gi|332797012|ref|YP_004458512.1|	-	0.11	12.0	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF758)
DUF2231	PF09990.4	gi|332797013|ref|YP_004458513.1|	-	0.073	13.4	4.8	0.11	12.7	3.4	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2231)
DUF2142	PF09913.4	gi|332797013|ref|YP_004458513.1|	-	0.26	9.8	6.4	0.33	9.5	4.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2142)
L_HGMIC_fpl	PF10242.4	gi|332797013|ref|YP_004458513.1|	-	0.28	11.1	4.6	0.3	11.0	3.2	1.0	1	0	0	1	1	1	0	Lipoma	HMGIC	fusion	partner-like	protein
Fig1	PF12351.3	gi|332797013|ref|YP_004458513.1|	-	0.42	10.4	6.3	0.42	10.4	4.4	1.1	1	0	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
DUF1469	PF07332.6	gi|332797013|ref|YP_004458513.1|	-	2.5	7.8	8.1	3.1	7.5	5.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF4405	PF14358.1	gi|332797013|ref|YP_004458513.1|	-	4.7	7.4	8.2	10	6.3	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4405)
SdpI	PF13630.1	gi|332797013|ref|YP_004458513.1|	-	5	6.8	11.9	7.5	6.3	8.3	1.4	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
SecE	PF00584.15	gi|332797013|ref|YP_004458513.1|	-	6.9	6.3	12.9	0.1	12.1	1.7	2.2	2	0	0	2	2	2	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
DUF3923	PF13061.1	gi|332797013|ref|YP_004458513.1|	-	8.3	6.3	13.0	2.7	7.8	1.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3923)
DUF342	PF03961.8	gi|332797014|ref|YP_004458514.1|	-	0.0039	15.6	3.5	0.0056	15.1	2.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
Vip3A_N	PF12495.3	gi|332797014|ref|YP_004458514.1|	-	0.021	14.4	6.2	0.03	14.0	3.8	1.6	1	1	1	2	2	2	0	Vegetative	insecticide	protein	3A	N	terminal
PhaP_Bmeg	PF09602.5	gi|332797014|ref|YP_004458514.1|	-	0.028	14.2	1.8	0.041	13.7	1.2	1.2	1	0	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
YlqD	PF11068.3	gi|332797014|ref|YP_004458514.1|	-	0.04	13.9	6.2	0.048	13.7	3.2	1.8	1	1	1	2	2	2	0	YlqD	protein
Laminin_I	PF06008.9	gi|332797014|ref|YP_004458514.1|	-	0.054	12.8	5.3	0.074	12.3	3.7	1.1	1	0	0	1	1	1	0	Laminin	Domain	I
SHOCT	PF09851.4	gi|332797014|ref|YP_004458514.1|	-	0.055	12.9	1.3	0.055	12.9	0.9	2.6	3	0	0	3	3	3	0	Short	C-terminal	domain
DUF976	PF06162.7	gi|332797014|ref|YP_004458514.1|	-	0.069	12.6	1.9	0.11	12.0	1.3	1.4	1	0	0	1	1	1	0	Caenorhabditis	elegans	protein	of	unknown	function	(DUF976)
SPX	PF03105.14	gi|332797014|ref|YP_004458514.1|	-	0.14	11.8	9.6	0.29	10.8	6.7	1.5	1	1	0	1	1	1	0	SPX	domain
IncA	PF04156.9	gi|332797014|ref|YP_004458514.1|	-	0.24	10.9	5.7	0.41	10.2	3.9	1.5	1	1	0	1	1	1	0	IncA	protein
DUF724	PF05266.9	gi|332797014|ref|YP_004458514.1|	-	0.25	10.9	8.7	0.39	10.3	4.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
DUF883	PF05957.8	gi|332797014|ref|YP_004458514.1|	-	0.42	11.0	3.1	0.63	10.4	0.9	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Prefoldin_2	PF01920.15	gi|332797014|ref|YP_004458514.1|	-	0.43	10.3	12.2	0.36	10.5	0.7	2.9	1	1	1	2	2	2	0	Prefoldin	subunit
V_ATPase_I	PF01496.14	gi|332797014|ref|YP_004458514.1|	-	0.84	7.4	4.9	1	7.1	3.4	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
ASL_C	PF08328.6	gi|332797014|ref|YP_004458514.1|	-	0.89	9.4	5.6	3.6	7.4	0.5	2.4	1	1	1	2	2	2	0	Adenylosuccinate	lyase	C-terminal
Prefoldin	PF02996.12	gi|332797014|ref|YP_004458514.1|	-	0.91	9.1	9.0	0.82	9.3	0.0	2.8	2	1	1	3	3	3	0	Prefoldin	subunit
Exonuc_VII_L	PF02601.10	gi|332797014|ref|YP_004458514.1|	-	1.1	8.3	7.5	1.4	8.0	5.2	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
Syntaxin	PF00804.20	gi|332797014|ref|YP_004458514.1|	-	3.4	7.9	12.1	3.3	7.9	6.5	2.3	1	1	1	2	2	2	0	Syntaxin
Enkurin	PF13864.1	gi|332797014|ref|YP_004458514.1|	-	5.4	7.2	11.9	27	5.0	4.7	3.0	1	1	1	2	2	2	0	Calmodulin-binding
DUF904	PF06005.7	gi|332797014|ref|YP_004458514.1|	-	6.3	7.1	8.1	2.5	8.4	2.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Snf7	PF03357.16	gi|332797015|ref|YP_004458515.1|	-	2e-05	24.0	3.7	2e-05	24.0	2.6	1.5	1	1	0	1	1	1	1	Snf7
Sulfolobus_pRN	PF05584.6	gi|332797015|ref|YP_004458515.1|	-	0.015	15.2	0.0	0.046	13.6	0.0	1.8	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
Baculo_PEP_C	PF04513.7	gi|332797015|ref|YP_004458515.1|	-	0.039	13.7	0.7	7.1	6.4	0.1	2.4	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
HTH_27	PF13463.1	gi|332797015|ref|YP_004458515.1|	-	0.11	12.8	0.0	0.3	11.4	0.0	1.8	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DivIVA	PF05103.8	gi|332797015|ref|YP_004458515.1|	-	0.2	11.7	3.8	1.2	9.2	0.6	2.5	2	0	0	2	2	2	0	DivIVA	protein
AAA	PF00004.24	gi|332797016|ref|YP_004458516.1|	-	1.1e-39	135.6	0.0	2.5e-37	128.0	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|332797016|ref|YP_004458516.1|	-	1.2e-16	60.3	1.6	3e-16	59.0	0.6	2.0	2	0	0	2	2	2	1	MIT	(microtubule	interacting	and	transport)	domain
Vps4_C	PF09336.5	gi|332797016|ref|YP_004458516.1|	-	6.8e-09	35.4	0.8	3.1e-08	33.3	0.1	2.2	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_2	PF07724.9	gi|332797016|ref|YP_004458516.1|	-	5.8e-08	32.8	0.0	1.7e-07	31.3	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.7	gi|332797016|ref|YP_004458516.1|	-	1.9e-07	30.3	0.0	7.7e-07	28.3	0.0	2.0	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|332797016|ref|YP_004458516.1|	-	6.4e-07	29.3	0.4	4.2e-06	26.6	0.0	2.4	3	0	0	3	3	3	1	AAA	domain
AAA_22	PF13401.1	gi|332797016|ref|YP_004458516.1|	-	2.8e-06	27.5	0.0	2.2e-05	24.6	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332797016|ref|YP_004458516.1|	-	1.3e-05	25.9	0.2	4.8e-05	24.1	0.0	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|332797016|ref|YP_004458516.1|	-	6.3e-05	23.0	0.0	0.0045	17.0	0.0	3.2	3	1	1	4	4	4	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|332797016|ref|YP_004458516.1|	-	6.6e-05	22.6	0.1	0.00098	18.8	0.0	2.7	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
AAA_25	PF13481.1	gi|332797016|ref|YP_004458516.1|	-	0.00021	20.7	0.1	0.1	12.0	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|332797016|ref|YP_004458516.1|	-	0.00039	19.5	0.0	0.00097	18.2	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
TPR_11	PF13414.1	gi|332797016|ref|YP_004458516.1|	-	0.00055	19.5	0.2	0.0016	18.0	0.1	1.9	1	1	0	1	1	1	1	TPR	repeat
AAA_24	PF13479.1	gi|332797016|ref|YP_004458516.1|	-	0.00094	18.8	0.1	0.0028	17.2	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
TIP49	PF06068.8	gi|332797016|ref|YP_004458516.1|	-	0.001	17.8	0.0	0.0022	16.8	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
RNA_helicase	PF00910.17	gi|332797016|ref|YP_004458516.1|	-	0.0014	18.7	0.1	0.0086	16.2	0.0	2.4	2	1	0	2	2	2	1	RNA	helicase
ResIII	PF04851.10	gi|332797016|ref|YP_004458516.1|	-	0.0027	17.5	0.0	0.16	11.8	0.0	2.3	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
TPR_7	PF13176.1	gi|332797016|ref|YP_004458516.1|	-	0.0029	17.2	0.2	0.016	14.9	0.1	2.4	1	1	0	1	1	1	1	Tetratricopeptide	repeat
AAA_10	PF12846.2	gi|332797016|ref|YP_004458516.1|	-	0.0043	16.5	0.3	8.6	5.6	0.0	3.3	4	0	0	4	4	3	0	AAA-like	domain
Mg_chelatase	PF01078.16	gi|332797016|ref|YP_004458516.1|	-	0.0054	15.9	0.0	0.013	14.7	0.0	1.7	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Arch_ATPase	PF01637.13	gi|332797016|ref|YP_004458516.1|	-	0.006	16.2	4.2	1.7	8.2	0.2	3.3	2	1	2	4	4	4	2	Archaeal	ATPase
AAA_33	PF13671.1	gi|332797016|ref|YP_004458516.1|	-	0.0064	16.3	0.0	0.019	14.8	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|332797016|ref|YP_004458516.1|	-	0.007	15.8	0.0	0.012	15.0	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|332797016|ref|YP_004458516.1|	-	0.0079	15.9	0.0	0.04	13.6	0.0	2.0	2	0	0	2	2	2	1	Part	of	AAA	domain
TPR_1	PF00515.23	gi|332797016|ref|YP_004458516.1|	-	0.012	15.2	0.2	0.062	12.9	0.1	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
NACHT	PF05729.7	gi|332797016|ref|YP_004458516.1|	-	0.013	15.2	0.0	0.033	13.8	0.0	1.7	2	0	0	2	2	1	0	NACHT	domain
ABC_tran	PF00005.22	gi|332797016|ref|YP_004458516.1|	-	0.023	14.9	0.0	0.28	11.4	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
TPR_8	PF13181.1	gi|332797016|ref|YP_004458516.1|	-	0.024	14.3	0.4	0.15	11.9	0.1	2.5	2	0	0	2	2	1	0	Tetratricopeptide	repeat
AAA_18	PF13238.1	gi|332797016|ref|YP_004458516.1|	-	0.038	14.2	0.0	0.31	11.3	0.0	2.5	1	1	1	2	2	2	0	AAA	domain
Sec66	PF09802.4	gi|332797016|ref|YP_004458516.1|	-	0.052	12.9	0.9	1.8	7.9	0.0	2.3	2	0	0	2	2	2	0	Preprotein	translocase	subunit	Sec66
TPR_6	PF13174.1	gi|332797016|ref|YP_004458516.1|	-	0.059	13.8	0.8	2.9	8.5	0.1	3.5	2	1	0	2	2	2	0	Tetratricopeptide	repeat
Parvo_NS1	PF01057.12	gi|332797016|ref|YP_004458516.1|	-	0.066	12.0	0.0	0.16	10.8	0.0	1.6	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
TPR_12	PF13424.1	gi|332797016|ref|YP_004458516.1|	-	0.091	12.7	0.0	0.22	11.4	0.0	1.7	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|332797016|ref|YP_004458516.1|	-	0.097	12.6	2.0	0.15	12.0	0.3	2.3	2	0	0	2	2	1	0	Tetratricopeptide	repeat
GAT	PF03127.9	gi|332797016|ref|YP_004458516.1|	-	0.11	12.4	1.4	0.64	10.0	0.2	2.5	2	1	1	3	3	2	0	GAT	domain
NTPase_1	PF03266.10	gi|332797016|ref|YP_004458516.1|	-	0.12	12.1	0.0	5.8	6.6	0.0	2.7	1	1	0	2	2	2	0	NTPase
Viral_helicase1	PF01443.13	gi|332797016|ref|YP_004458516.1|	-	0.16	11.5	0.0	0.29	10.6	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Topoisom_bac	PF01131.15	gi|332797017|ref|YP_004458517.1|	-	3.9e-105	351.9	0.1	4.8e-105	351.6	0.0	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|332797017|ref|YP_004458517.1|	-	4.5e-06	26.5	0.5	9e-05	22.3	0.0	2.5	2	0	0	2	2	2	1	Toprim	domain
RNA_pol_Rpb6	PF01192.17	gi|332797018|ref|YP_004458518.1|	-	3.9e-14	52.1	0.1	7e-14	51.3	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Pox_RNA_Pol_19	PF05320.7	gi|332797018|ref|YP_004458518.1|	-	0.01	15.5	0.2	0.012	15.4	0.2	1.1	1	0	0	1	1	1	0	Poxvirus	DNA-directed	RNA	polymerase	19	kDa	subunit
Aminotran_5	PF00266.14	gi|332797019|ref|YP_004458519.1|	-	1.5e-28	99.6	0.0	1.8e-28	99.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|332797019|ref|YP_004458519.1|	-	3.8e-07	29.3	0.0	5.7e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|332797019|ref|YP_004458519.1|	-	1.1e-05	23.9	0.2	2.1e-05	22.9	0.1	1.5	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|332797019|ref|YP_004458519.1|	-	0.00012	21.3	0.0	0.0003	20.0	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
SAP	PF02037.22	gi|332797019|ref|YP_004458519.1|	-	0.019	14.4	0.7	0.049	13.1	0.5	1.7	1	0	0	1	1	1	0	SAP	domain
eRF1_2	PF03464.10	gi|332797019|ref|YP_004458519.1|	-	0.069	13.4	0.0	2.8	8.2	0.0	2.5	2	0	0	2	2	2	0	eRF1	domain	2
2-Hacid_dh_C	PF02826.14	gi|332797020|ref|YP_004458520.1|	-	6.2e-48	162.2	0.9	1.9e-47	160.7	0.2	1.9	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|332797020|ref|YP_004458520.1|	-	5.1e-35	119.8	0.5	6.1e-35	119.5	0.3	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|332797020|ref|YP_004458520.1|	-	4e-06	26.7	0.8	4e-06	26.7	0.6	2.0	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|332797020|ref|YP_004458520.1|	-	6.6e-05	22.8	3.2	7.3e-05	22.6	0.4	2.2	3	0	0	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|332797020|ref|YP_004458520.1|	-	0.0011	18.3	0.5	0.016	14.5	0.1	2.3	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ThiC	PF01964.13	gi|332797020|ref|YP_004458520.1|	-	0.029	12.9	0.2	0.064	11.7	0.2	1.4	2	0	0	2	2	2	0	ThiC	family
Resolvase	PF00239.16	gi|332797020|ref|YP_004458520.1|	-	0.084	12.7	0.1	0.24	11.2	0.1	1.9	1	0	0	1	1	1	0	Resolvase,	N	terminal	domain
UDPG_MGDP_dh_N	PF03721.9	gi|332797020|ref|YP_004458520.1|	-	0.49	9.7	3.9	4.6	6.5	0.3	3.0	2	1	1	3	3	3	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Lsm_C	PF14894.1	gi|332797020|ref|YP_004458520.1|	-	0.7	9.4	3.3	0.46	10.0	0.4	2.0	2	0	0	2	2	2	0	Lsm	C-terminal
AlaDh_PNT_C	PF01262.16	gi|332797020|ref|YP_004458520.1|	-	4.4	6.8	6.7	4.7	6.7	0.1	3.3	4	0	0	4	4	4	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
HhH-GPD	PF00730.20	gi|332797021|ref|YP_004458521.1|	-	0.00011	22.4	0.0	0.00018	21.7	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|332797021|ref|YP_004458521.1|	-	0.077	12.7	0.0	0.15	11.8	0.0	1.5	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
DZR	PF12773.2	gi|332797023|ref|YP_004458523.1|	-	0.0019	17.9	6.6	0.1	12.4	4.8	2.1	1	1	0	1	1	1	1	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|332797023|ref|YP_004458523.1|	-	0.0024	17.5	6.8	0.032	13.9	2.3	2.2	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
PhnA_Zn_Ribbon	PF08274.7	gi|332797023|ref|YP_004458523.1|	-	0.011	15.4	2.1	1.4	8.7	0.1	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-H2C2_2	PF13465.1	gi|332797023|ref|YP_004458523.1|	-	0.012	15.8	12.6	0.81	10.0	2.6	3.2	2	1	1	3	3	3	0	Zinc-finger	double	domain
zf-BED	PF02892.10	gi|332797023|ref|YP_004458523.1|	-	0.014	15.1	11.2	0.28	10.9	0.0	3.0	2	1	1	3	3	3	0	BED	zinc	finger
Rep_fac-A_C	PF08646.5	gi|332797023|ref|YP_004458523.1|	-	0.021	14.5	3.2	0.027	14.1	2.2	1.2	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-AN1	PF01428.11	gi|332797023|ref|YP_004458523.1|	-	0.026	14.4	6.5	0.4	10.5	1.5	2.4	1	1	1	2	2	2	0	AN1-like	Zinc	finger
zf-C4_Topoisom	PF01396.14	gi|332797023|ref|YP_004458523.1|	-	0.029	13.8	8.1	0.18	11.3	0.3	2.9	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.14	gi|332797023|ref|YP_004458523.1|	-	0.042	13.5	4.3	0.74	9.5	3.0	2.0	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-C3HC4_3	PF13920.1	gi|332797023|ref|YP_004458523.1|	-	0.056	13.1	8.4	1.3	8.7	2.1	2.4	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF1272	PF06906.6	gi|332797023|ref|YP_004458523.1|	-	0.061	13.1	6.9	0.28	11.0	4.8	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-RING_3	PF14369.1	gi|332797023|ref|YP_004458523.1|	-	0.11	12.4	7.6	0.82	9.7	0.4	2.6	2	1	0	2	2	2	0	zinc-finger
DNA_ligase_ZBD	PF03119.11	gi|332797023|ref|YP_004458523.1|	-	0.12	12.1	0.9	0.12	12.1	0.6	2.7	3	1	1	4	4	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_2	PF13240.1	gi|332797023|ref|YP_004458523.1|	-	0.12	11.8	0.5	0.12	11.8	0.3	3.1	3	1	0	3	3	3	0	zinc-ribbon	domain
zinc-ribbons_6	PF07191.7	gi|332797023|ref|YP_004458523.1|	-	0.14	11.9	7.0	1.7	8.5	2.1	2.4	1	1	1	2	2	2	0	zinc-ribbons
zf-TFIIB	PF13453.1	gi|332797023|ref|YP_004458523.1|	-	0.16	11.1	3.9	3	7.1	0.0	2.5	3	0	0	3	3	2	0	Transcription	factor	zinc-finger
DUF4379	PF14311.1	gi|332797023|ref|YP_004458523.1|	-	0.18	11.6	3.3	0.36	10.6	2.3	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
C1_2	PF03107.11	gi|332797023|ref|YP_004458523.1|	-	0.3	11.2	7.1	0.15	12.2	2.7	2.2	2	1	0	2	2	2	0	C1	domain
zf-B_box	PF00643.19	gi|332797023|ref|YP_004458523.1|	-	0.33	10.8	10.0	1.7	8.6	4.1	2.8	2	1	0	2	2	2	0	B-box	zinc	finger
zf-C2H2_4	PF13894.1	gi|332797023|ref|YP_004458523.1|	-	0.36	11.2	12.2	3.8	8.0	1.3	3.2	3	0	0	3	3	3	0	C2H2-type	zinc	finger
zf-ribbon_3	PF13248.1	gi|332797023|ref|YP_004458523.1|	-	0.42	9.8	12.8	0.28	10.4	0.4	3.2	3	1	0	3	3	3	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|332797023|ref|YP_004458523.1|	-	0.51	10.3	10.2	0.28	11.1	5.1	2.1	2	1	0	2	2	2	0	Zinc	ribbon	domain
zf-RING_4	PF14570.1	gi|332797023|ref|YP_004458523.1|	-	0.62	9.7	9.2	1.1	8.8	2.1	2.2	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
zf-UBR	PF02207.15	gi|332797023|ref|YP_004458523.1|	-	0.69	9.6	5.1	1.2	8.8	3.5	1.6	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
C1_1	PF00130.17	gi|332797023|ref|YP_004458523.1|	-	0.85	9.4	6.6	2	8.1	1.8	2.1	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-Di19	PF05605.7	gi|332797023|ref|YP_004458523.1|	-	0.93	9.6	9.6	3.3	7.9	0.1	3.2	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
TerY-C	PF15616.1	gi|332797023|ref|YP_004458523.1|	-	0.99	9.3	8.1	4.9	7.0	0.2	2.6	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
zf-C2HC5	PF06221.8	gi|332797023|ref|YP_004458523.1|	-	1.1	9.0	7.0	9.4	6.0	4.9	2.3	1	1	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Gin	PF10764.4	gi|332797023|ref|YP_004458523.1|	-	1.2	8.9	9.7	0.67	9.7	4.5	2.2	1	1	1	2	2	2	0	Inhibitor	of	sigma-G	Gin
zf-tcix	PF14952.1	gi|332797023|ref|YP_004458523.1|	-	1.2	8.4	8.4	1.1	8.6	1.1	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
TF_Zn_Ribbon	PF08271.7	gi|332797023|ref|YP_004458523.1|	-	1.3	8.4	10.6	1.3	8.4	0.2	2.9	3	0	0	3	3	3	0	TFIIB	zinc-binding
Zn_ribbon_recom	PF13408.1	gi|332797023|ref|YP_004458523.1|	-	1.4	9.1	12.8	31	4.9	0.2	2.1	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-IS66	PF13005.2	gi|332797023|ref|YP_004458523.1|	-	1.5	8.8	0.1	1.5	8.8	0.1	2.7	2	1	1	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
zf-CHY	PF05495.7	gi|332797023|ref|YP_004458523.1|	-	1.6	8.9	8.4	22	5.2	5.8	2.3	1	1	0	1	1	1	0	CHY	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|332797023|ref|YP_004458523.1|	-	1.6	8.6	12.8	0.38	10.5	0.8	2.7	1	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
Sgf11	PF08209.6	gi|332797023|ref|YP_004458523.1|	-	1.8	7.9	7.3	13	5.1	0.2	3.1	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
ZZ	PF00569.12	gi|332797023|ref|YP_004458523.1|	-	1.8	8.1	6.0	2.5	7.7	2.5	2.2	2	0	0	2	2	2	0	Zinc	finger,	ZZ	type
DiS_P_DiS	PF06750.8	gi|332797023|ref|YP_004458523.1|	-	1.8	8.4	5.3	22	4.9	0.0	2.9	2	1	1	3	3	3	0	Bacterial	Peptidase	A24	N-terminal	domain
ADK_lid	PF05191.9	gi|332797023|ref|YP_004458523.1|	-	1.8	8.3	8.1	1.3	8.7	3.3	2.2	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
OrfB_Zn_ribbon	PF07282.6	gi|332797023|ref|YP_004458523.1|	-	2	8.1	6.5	3.6	7.3	1.2	2.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-RING_2	PF13639.1	gi|332797023|ref|YP_004458523.1|	-	2.5	8.0	6.2	9.9	6.0	4.3	1.9	1	1	0	1	1	1	0	Ring	finger	domain
zf-ISL3	PF14690.1	gi|332797023|ref|YP_004458523.1|	-	2.5	8.1	8.7	7.4	6.6	0.1	3.0	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Lar_restr_allev	PF14354.1	gi|332797023|ref|YP_004458523.1|	-	2.7	8.3	9.3	7.5	6.9	4.3	2.3	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zinc_ribbon_4	PF13717.1	gi|332797023|ref|YP_004458523.1|	-	3.1	7.5	12.3	1.6	8.4	5.4	2.4	2	1	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332797023|ref|YP_004458523.1|	-	3.2	7.4	10.2	1	9.0	0.7	2.8	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-RING_5	PF14634.1	gi|332797023|ref|YP_004458523.1|	-	3.4	7.4	9.6	13	5.5	0.2	2.5	1	1	2	3	3	3	0	zinc-RING	finger	domain
DUF581	PF04570.9	gi|332797023|ref|YP_004458523.1|	-	3.5	7.0	7.7	2.2	7.6	2.7	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF581)
zf-LITAF-like	PF10601.4	gi|332797023|ref|YP_004458523.1|	-	4	7.3	8.8	25	4.8	0.2	3.0	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|332797023|ref|YP_004458523.1|	-	4.1	7.9	13.7	3.6	8.1	1.8	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
zinc_ribbon_5	PF13719.1	gi|332797023|ref|YP_004458523.1|	-	4.1	7.0	12.4	1.7	8.3	5.4	2.4	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-Mss51	PF13824.1	gi|332797023|ref|YP_004458523.1|	-	4.5	7.2	6.8	1.9e+02	1.9	4.6	2.7	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Mu-like_Com	PF10122.4	gi|332797023|ref|YP_004458523.1|	-	5	6.2	8.3	3.5	6.7	1.8	2.2	1	1	0	2	2	2	0	Mu-like	prophage	protein	Com
DUF329	PF03884.9	gi|332797023|ref|YP_004458523.1|	-	5.1	6.7	9.8	12	5.4	1.3	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF329)
Cys_rich_CPXG	PF14255.1	gi|332797023|ref|YP_004458523.1|	-	5.1	6.9	8.2	1.8	8.4	0.1	2.9	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
Ribosomal_S27e	PF01667.12	gi|332797023|ref|YP_004458523.1|	-	5.7	6.5	8.3	73	3.0	3.4	2.9	2	1	0	2	2	2	0	Ribosomal	protein	S27
FANCL_C	PF11793.3	gi|332797023|ref|YP_004458523.1|	-	7.4	6.6	10.5	2.4	8.1	0.2	2.7	2	1	0	2	2	2	0	FANCL	C-terminal	domain
Ogr_Delta	PF04606.7	gi|332797023|ref|YP_004458523.1|	-	7.4	6.3	7.0	12	5.6	0.1	2.7	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
EAL	PF00563.15	gi|332797024|ref|YP_004458524.1|	-	0.0019	17.7	0.0	0.002	17.6	0.0	1.0	1	0	0	1	1	1	1	EAL	domain
DapH_N	PF08503.5	gi|332797024|ref|YP_004458524.1|	-	0.037	14.1	0.0	0.062	13.4	0.0	1.4	1	1	0	1	1	1	0	Tetrahydrodipicolinate	succinyltransferase	N-terminal
ATP_bind_1	PF03029.12	gi|332797024|ref|YP_004458524.1|	-	0.091	12.2	0.0	0.097	12.2	0.0	1.0	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Tox-URI2	PF15653.1	gi|332797025|ref|YP_004458525.1|	-	0.0099	16.0	0.7	0.038	14.1	0.5	2.0	1	1	0	1	1	1	1	URI	fold	toxin	2
DAGAT	PF03982.8	gi|332797025|ref|YP_004458525.1|	-	0.08	11.6	0.8	0.72	8.4	0.0	2.0	1	1	1	2	2	2	0	Diacylglycerol	acyltransferase
Formyl_trans_C	PF02911.13	gi|332797025|ref|YP_004458525.1|	-	0.13	12.3	0.2	0.38	10.8	0.1	1.9	1	1	0	1	1	1	0	Formyl	transferase,	C-terminal	domain
SRR	PF07709.6	gi|332797025|ref|YP_004458525.1|	-	0.42	10.9	2.0	9.8	6.8	0.2	2.9	2	0	0	2	2	2	0	Seven	Residue	Repeat
NAD_binding_8	PF13450.1	gi|332797026|ref|YP_004458526.1|	-	6.9e-07	29.2	0.1	1.5e-06	28.1	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|332797026|ref|YP_004458526.1|	-	2.2e-05	23.5	0.1	3.5e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|332797026|ref|YP_004458526.1|	-	3.5e-05	23.5	0.0	6.2e-05	22.7	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|332797026|ref|YP_004458526.1|	-	8e-05	22.9	0.0	0.00036	20.8	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|332797026|ref|YP_004458526.1|	-	0.00081	18.8	0.0	0.0014	18.0	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|332797026|ref|YP_004458526.1|	-	0.0016	18.2	0.0	0.0041	16.8	0.0	1.7	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|332797026|ref|YP_004458526.1|	-	0.0019	17.6	0.0	0.0036	16.7	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_2	PF07992.9	gi|332797026|ref|YP_004458526.1|	-	0.0032	17.3	0.0	0.005	16.7	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.10	gi|332797026|ref|YP_004458526.1|	-	0.004	17.0	0.0	0.0084	15.9	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
GIDA	PF01134.17	gi|332797026|ref|YP_004458526.1|	-	0.012	14.4	0.0	0.024	13.5	0.0	1.4	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|332797026|ref|YP_004458526.1|	-	0.021	13.3	0.0	0.033	12.6	0.0	1.3	1	0	0	1	1	1	0	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332797026|ref|YP_004458526.1|	-	0.028	13.4	0.0	0.11	11.5	0.0	1.8	2	0	0	2	2	2	0	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|332797026|ref|YP_004458526.1|	-	0.032	13.1	0.0	6.1	5.6	0.0	2.4	3	0	0	3	3	3	0	Lycopene	cyclase	protein
DUF1188	PF06690.6	gi|332797026|ref|YP_004458526.1|	-	0.032	13.3	0.1	2	7.5	0.0	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1188)
tRNA-synt_1	PF00133.17	gi|332797027|ref|YP_004458527.1|	-	4.1e-125	418.0	0.1	4.2e-124	414.7	0.1	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|332797027|ref|YP_004458527.1|	-	9.4e-31	106.6	2.6	2.2e-30	105.4	1.8	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|332797027|ref|YP_004458527.1|	-	1.2e-29	103.1	0.1	2.5e-12	46.1	0.0	3.6	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|332797027|ref|YP_004458527.1|	-	2.4e-07	30.2	0.1	5e-06	25.9	0.0	2.6	1	1	1	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|332797027|ref|YP_004458527.1|	-	0.00018	20.4	0.0	0.0086	14.9	0.0	2.6	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(R)
DUF840	PF05801.6	gi|332797027|ref|YP_004458527.1|	-	0.012	15.7	2.1	0.026	14.6	1.5	1.5	1	0	0	1	1	1	0	Lagovirus	protein	of	unknown	function	(DUF840)
tRNA-synt_1e	PF01406.14	gi|332797027|ref|YP_004458527.1|	-	0.014	14.5	0.0	1.7	7.7	0.0	2.5	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
Aminotran_1_2	PF00155.16	gi|332797028|ref|YP_004458528.1|	-	1.4e-77	261.0	0.0	1.6e-77	260.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|332797028|ref|YP_004458528.1|	-	3.5e-11	42.7	0.0	5e-11	42.2	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|332797028|ref|YP_004458528.1|	-	6.3e-08	32.1	0.0	1.1e-07	31.3	0.0	1.4	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|332797028|ref|YP_004458528.1|	-	2.1e-06	26.7	0.0	4.8e-06	25.5	0.0	1.5	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|332797028|ref|YP_004458528.1|	-	0.00022	19.6	0.0	0.00035	18.9	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
IGPS	PF00218.16	gi|332797029|ref|YP_004458529.1|	-	1.7e-75	253.3	0.1	2.1e-75	253.0	0.0	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|332797029|ref|YP_004458529.1|	-	4.7e-05	22.7	0.1	0.00091	18.5	0.0	2.6	2	1	1	3	3	3	1	Histidine	biosynthesis	protein
QRPTase_C	PF01729.14	gi|332797029|ref|YP_004458529.1|	-	0.0034	16.9	0.1	0.0073	15.8	0.0	1.5	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PcrB	PF01884.12	gi|332797029|ref|YP_004458529.1|	-	0.027	13.7	0.1	0.077	12.2	0.0	1.8	2	0	0	2	2	2	0	PcrB	family
NanE	PF04131.9	gi|332797029|ref|YP_004458529.1|	-	0.11	11.5	0.1	0.41	9.5	0.0	1.9	2	1	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
GATase	PF00117.23	gi|332797030|ref|YP_004458530.1|	-	6.7e-52	175.7	0.1	7.4e-52	175.6	0.1	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|332797030|ref|YP_004458530.1|	-	3.9e-12	46.0	0.1	1e-11	44.6	0.0	1.7	1	1	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|332797030|ref|YP_004458530.1|	-	0.057	13.0	0.1	0.079	12.5	0.0	1.4	1	1	0	1	1	1	0	SNO	glutamine	amidotransferase	family
Chorismate_bind	PF00425.13	gi|332797031|ref|YP_004458531.1|	-	7e-92	307.3	0.0	8.7e-92	307.0	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|332797031|ref|YP_004458531.1|	-	1.2e-15	57.7	0.2	2.3e-14	53.5	0.1	2.8	2	1	0	2	2	2	1	Anthranilate	synthase	component	I,	N	terminal	region
PRAI	PF00697.17	gi|332797032|ref|YP_004458532.1|	-	5e-33	114.3	0.0	5.6e-33	114.1	0.0	1.0	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
Glycos_transf_3	PF00591.16	gi|332797033|ref|YP_004458533.1|	-	1.4e-73	247.4	0.1	1.9e-73	246.9	0.1	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|332797033|ref|YP_004458533.1|	-	1.9e-18	65.8	0.3	5.4e-18	64.3	0.1	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family,	helical	bundle	domain
Trp_syntA	PF00290.15	gi|332797034|ref|YP_004458534.1|	-	5.7e-38	129.9	0.0	6.8e-38	129.6	0.0	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|332797034|ref|YP_004458534.1|	-	9.9e-06	24.9	0.4	3.9e-05	23.0	0.2	1.9	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|332797034|ref|YP_004458534.1|	-	0.00019	20.7	1.4	0.00063	19.0	0.3	2.0	1	1	1	2	2	2	1	PcrB	family
Ribul_P_3_epim	PF00834.14	gi|332797034|ref|YP_004458534.1|	-	0.0013	17.9	0.0	0.0019	17.3	0.0	1.2	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
FMN_dh	PF01070.13	gi|332797034|ref|YP_004458534.1|	-	0.01	14.7	0.3	0.11	11.3	0.1	2.5	3	0	0	3	3	3	1	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|332797034|ref|YP_004458534.1|	-	0.021	13.9	0.3	0.096	11.8	0.2	1.9	1	1	1	2	2	2	0	Nitronate	monooxygenase
DUF561	PF04481.7	gi|332797034|ref|YP_004458534.1|	-	0.13	11.2	0.1	4.8	6.0	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
TMP-TENI	PF02581.12	gi|332797034|ref|YP_004458534.1|	-	0.14	11.2	0.0	0.33	10.0	0.0	1.6	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
PALP	PF00291.20	gi|332797035|ref|YP_004458535.1|	-	1.1e-37	129.9	0.0	1.5e-37	129.4	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Acylphosphatase	PF00708.13	gi|332797036|ref|YP_004458536.1|	-	2.8e-30	104.2	0.0	3e-30	104.1	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
T2SM_b	PF10741.4	gi|332797036|ref|YP_004458536.1|	-	0.097	12.3	0.0	0.099	12.2	0.0	1.1	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	M	subtype	b
NAD_binding_5	PF07994.7	gi|332797037|ref|YP_004458537.1|	-	4.4e-56	190.5	0.0	1.2e-55	189.1	0.0	1.6	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|332797037|ref|YP_004458537.1|	-	4.1e-31	107.1	0.0	7.3e-31	106.3	0.0	1.4	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
zf-B_box	PF00643.19	gi|332797038|ref|YP_004458538.1|	-	1.7e-05	24.5	33.0	0.0015	18.3	3.8	4.0	3	1	1	4	4	4	3	B-box	zinc	finger
zf-HIT	PF04438.11	gi|332797038|ref|YP_004458538.1|	-	0.00019	20.9	5.8	0.00019	20.9	4.0	5.1	2	1	1	3	3	3	1	HIT	zinc	finger
FYVE	PF01363.16	gi|332797038|ref|YP_004458538.1|	-	0.021	14.7	31.4	1.3e+04	-3.9	21.7	3.8	1	1	0	1	1	1	0	FYVE	zinc	finger
Prok-RING_2	PF14445.1	gi|332797038|ref|YP_004458538.1|	-	1.1	9.2	23.9	1.6	8.7	3.7	2.4	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	2
PPDK_N	PF01326.14	gi|332797039|ref|YP_004458539.1|	-	3e-101	338.7	0.3	1.4e-100	336.5	0.2	1.8	2	0	0	2	2	2	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|332797039|ref|YP_004458539.1|	-	1.1e-79	267.4	0.0	1.6e-79	266.8	0.0	1.3	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|332797039|ref|YP_004458539.1|	-	3.7e-29	100.1	1.4	8.6e-29	98.9	1.0	1.7	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Snf7	PF03357.16	gi|332797040|ref|YP_004458540.1|	-	3.3e-05	23.3	4.4	4.4e-05	22.9	3.0	1.2	1	0	0	1	1	1	1	Snf7
LOH1CR12	PF10158.4	gi|332797040|ref|YP_004458540.1|	-	0.00034	20.4	0.3	0.00065	19.4	0.2	1.6	1	0	0	1	1	1	1	Tumour	suppressor	protein
Pox_F11	PF04943.7	gi|332797040|ref|YP_004458540.1|	-	0.0033	16.3	0.3	0.0038	16.1	0.2	1.2	1	0	0	1	1	1	1	Poxvirus	F11	protein
DivIVA	PF05103.8	gi|332797040|ref|YP_004458540.1|	-	0.15	12.0	5.5	1.6	8.8	1.6	2.4	1	1	1	2	2	2	0	DivIVA	protein
MCR_gamma	PF02240.11	gi|332797041|ref|YP_004458541.1|	-	0.0026	16.9	0.3	0.0026	16.9	0.2	1.1	1	0	0	1	1	1	1	Methyl-coenzyme	M	reductase	gamma	subunit
UbiD	PF01977.11	gi|332797042|ref|YP_004458542.1|	-	2e-135	451.3	0.0	2.3e-135	451.1	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
PALP	PF00291.20	gi|332797043|ref|YP_004458543.1|	-	2.3e-68	230.6	1.7	2.7e-68	230.4	1.2	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
HypA	PF01155.14	gi|332797043|ref|YP_004458543.1|	-	0.021	14.4	0.2	0.038	13.6	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Zn-ribbon_8	PF09723.5	gi|332797043|ref|YP_004458543.1|	-	0.12	12.3	0.3	0.27	11.2	0.2	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|332797043|ref|YP_004458543.1|	-	0.29	10.6	3.6	0.59	9.6	2.5	1.4	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
AA_kinase	PF00696.23	gi|332797044|ref|YP_004458544.1|	-	9.6e-44	149.7	0.1	1.8e-43	148.8	0.1	1.5	1	0	0	1	1	1	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|332797044|ref|YP_004458544.1|	-	0.0043	16.4	0.5	0.015	14.7	0.3	2.0	1	0	0	1	1	1	1	ACT	domain
ACT_7	PF13840.1	gi|332797044|ref|YP_004458544.1|	-	0.018	14.5	2.7	0.037	13.5	0.4	2.5	3	0	0	3	3	3	0	ACT	domain
Semialdhyde_dh	PF01118.19	gi|332797045|ref|YP_004458545.1|	-	3e-32	111.4	0.0	5.2e-32	110.6	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|332797045|ref|YP_004458545.1|	-	7.5e-28	97.6	0.1	1.1e-27	97.0	0.1	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
GFO_IDH_MocA	PF01408.17	gi|332797045|ref|YP_004458545.1|	-	0.002	18.6	0.0	0.0037	17.7	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_10	PF13460.1	gi|332797045|ref|YP_004458545.1|	-	0.004	17.1	0.0	0.0076	16.2	0.0	1.5	1	0	0	1	1	1	1	NADH(P)-binding
DapB_N	PF01113.15	gi|332797045|ref|YP_004458545.1|	-	0.01	15.7	0.1	0.028	14.3	0.0	1.9	2	0	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
PHP_C	PF13263.1	gi|332797046|ref|YP_004458546.1|	-	1.4e-16	59.7	0.1	3e-16	58.6	0.1	1.6	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.14	gi|332797046|ref|YP_004458546.1|	-	1.4e-11	44.5	0.2	6.6e-11	42.3	0.1	2.1	1	1	0	1	1	1	1	PHP	domain
Glyco_hydro_97	PF10566.4	gi|332797046|ref|YP_004458546.1|	-	0.087	11.9	0.1	0.42	9.6	0.1	1.9	1	1	0	2	2	2	0	Glycoside	hydrolase	97
DUF650	PF04894.7	gi|332797047|ref|YP_004458547.1|	-	7.1e-100	333.9	0.6	9.8e-100	333.5	0.4	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|332797047|ref|YP_004458547.1|	-	1.6e-35	121.0	0.1	3.3e-35	120.0	0.1	1.5	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
OTCace	PF00185.19	gi|332797048|ref|YP_004458548.1|	-	1.9e-47	161.0	0.0	2.8e-47	160.5	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|332797048|ref|YP_004458548.1|	-	2.3e-42	144.0	0.0	3.6e-42	143.3	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
HTH_12	PF08461.5	gi|332797049|ref|YP_004458549.1|	-	0.00024	20.7	1.0	0.0029	17.3	0.3	2.5	2	0	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
DUF4443	PF14544.1	gi|332797049|ref|YP_004458549.1|	-	0.00057	19.7	0.0	0.00097	19.0	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4443)
Ribosomal_S19e	PF01090.14	gi|332797049|ref|YP_004458549.1|	-	0.0016	17.9	0.1	0.0029	17.0	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_27	PF13463.1	gi|332797049|ref|YP_004458549.1|	-	0.0044	17.3	0.2	0.0072	16.6	0.2	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|332797049|ref|YP_004458549.1|	-	0.0064	16.5	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	Penicillinase	repressor
DUF4093	PF13331.1	gi|332797049|ref|YP_004458549.1|	-	0.025	14.7	0.0	0.052	13.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4093)
U3_snoRNA_assoc	PF08297.6	gi|332797049|ref|YP_004458549.1|	-	0.045	14.0	0.2	6	7.1	0.0	2.3	2	0	0	2	2	2	0	U3	snoRNA	associated
HTH_20	PF12840.2	gi|332797049|ref|YP_004458549.1|	-	0.066	13.0	0.2	0.13	12.0	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|332797049|ref|YP_004458549.1|	-	0.09	12.6	0.0	0.29	10.9	0.0	1.9	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_36	PF13730.1	gi|332797049|ref|YP_004458549.1|	-	0.11	12.7	0.0	0.2	11.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797049|ref|YP_004458549.1|	-	0.13	12.3	0.0	0.48	10.5	0.0	1.9	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
NAD_kinase	PF01513.16	gi|332797050|ref|YP_004458550.1|	-	9e-53	178.8	0.4	1e-52	178.7	0.3	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|332797050|ref|YP_004458550.1|	-	0.00024	20.5	0.1	0.0021	17.4	0.0	2.2	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
Rrf2	PF02082.15	gi|332797051|ref|YP_004458551.1|	-	0.00021	21.3	0.0	0.74	9.9	0.0	2.7	3	0	0	3	3	3	2	Transcriptional	regulator
HTH_45	PF14947.1	gi|332797051|ref|YP_004458551.1|	-	0.00062	19.5	1.2	0.0014	18.4	0.0	2.2	3	0	0	3	3	3	1	Winged	helix-turn-helix
RNA12	PF10443.4	gi|332797051|ref|YP_004458551.1|	-	0.0027	16.2	1.3	0.0036	15.8	0.9	1.1	1	0	0	1	1	1	1	RNA12	protein
HrcA_DNA-bdg	PF03444.10	gi|332797051|ref|YP_004458551.1|	-	0.0093	15.3	0.1	0.32	10.4	0.0	2.7	3	1	0	3	3	3	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
TrmB	PF01978.14	gi|332797051|ref|YP_004458551.1|	-	0.025	14.2	0.0	0.11	12.2	0.0	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|332797051|ref|YP_004458551.1|	-	0.054	13.1	0.4	0.14	11.8	0.1	1.8	2	0	0	2	2	2	0	Homeodomain-like	domain
HemN_C	PF06969.11	gi|332797051|ref|YP_004458551.1|	-	0.054	13.5	0.0	0.13	12.3	0.0	1.7	1	0	0	1	1	1	0	HemN	C-terminal	domain
HA2	PF04408.18	gi|332797051|ref|YP_004458551.1|	-	0.064	13.2	0.1	0.11	12.5	0.1	1.4	1	0	0	1	1	1	0	Helicase	associated	domain	(HA2)
HTH_Crp_2	PF13545.1	gi|332797051|ref|YP_004458551.1|	-	0.081	12.7	0.0	0.2	11.4	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332797051|ref|YP_004458551.1|	-	0.082	12.5	0.0	0.24	11.0	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Nudix_N	PF12535.3	gi|332797051|ref|YP_004458551.1|	-	0.091	12.2	0.2	0.83	9.1	0.0	2.3	2	0	0	2	2	2	0	Hydrolase	of	X-linked	nucleoside	diphosphate	N	terminal
DUF1177	PF06675.6	gi|332797051|ref|YP_004458551.1|	-	0.15	10.6	0.2	0.19	10.2	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1177)
SPOUT_MTase	PF02590.12	gi|332797051|ref|YP_004458551.1|	-	0.33	10.6	4.0	0.32	10.7	1.6	1.8	2	0	0	2	2	2	0	Predicted	SPOUT	methyltransferase
Ribosomal_L20	PF00453.13	gi|332797052|ref|YP_004458552.1|	-	0.027	14.4	0.4	0.047	13.6	0.3	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L20
DUF4355	PF14265.1	gi|332797052|ref|YP_004458552.1|	-	0.11	12.4	5.2	0.089	12.7	2.6	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
Med6	PF04934.9	gi|332797052|ref|YP_004458552.1|	-	0.15	11.5	2.0	0.18	11.3	0.2	1.8	1	1	1	2	2	2	0	MED6	mediator	sub	complex	component
PFEMP	PF03011.10	gi|332797052|ref|YP_004458552.1|	-	0.34	11.2	7.1	2.4	8.4	1.5	2.1	1	1	1	2	2	2	0	PFEMP	DBL	domain
DEAD_2	PF06733.10	gi|332797052|ref|YP_004458552.1|	-	0.63	9.4	5.2	0.31	10.4	0.9	1.9	1	1	1	2	2	2	0	DEAD_2
DUF365	PF04033.7	gi|332797052|ref|YP_004458552.1|	-	1.1	9.2	3.6	1.1	9.3	1.5	1.6	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF365)
FAM72	PF14976.1	gi|332797053|ref|YP_004458553.1|	-	0.032	14.0	0.1	0.063	13.1	0.0	1.5	1	0	0	1	1	1	0	FAM72	protein
Borrelia_lipo_2	PF06238.6	gi|332797053|ref|YP_004458553.1|	-	0.25	11.4	3.2	1.7	8.6	0.2	2.7	1	1	1	2	2	2	0	Borrelia	burgdorferi	BBR25	lipoprotein
Cpn60_TCP1	PF00118.19	gi|332797055|ref|YP_004458555.1|	-	7.1e-164	546.0	13.2	8.1e-164	545.8	9.2	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF438	PF04282.8	gi|332797056|ref|YP_004458556.1|	-	0.065	13.0	0.2	0.11	12.3	0.1	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF438)
TrmB	PF01978.14	gi|332797057|ref|YP_004458557.1|	-	0.0014	18.2	1.0	0.0018	17.9	0.1	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF763	PF05559.6	gi|332797057|ref|YP_004458557.1|	-	0.013	14.4	0.2	0.014	14.3	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
DUF4423	PF14394.1	gi|332797057|ref|YP_004458557.1|	-	0.041	13.4	0.1	0.065	12.7	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
GPP34	PF05719.6	gi|332797057|ref|YP_004458557.1|	-	0.058	13.4	0.1	0.069	13.2	0.1	1.1	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
HTH_9	PF08221.6	gi|332797057|ref|YP_004458557.1|	-	0.061	13.2	0.1	0.081	12.8	0.1	1.2	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Clathrin	PF00637.15	gi|332797057|ref|YP_004458557.1|	-	0.064	12.8	0.3	0.097	12.2	0.1	1.3	1	1	0	1	1	1	0	Region	in	Clathrin	and	VPS
DRP	PF06044.7	gi|332797057|ref|YP_004458557.1|	-	0.077	11.9	0.0	0.078	11.9	0.0	1.2	1	0	0	1	1	1	0	Dam-replacing	family
RPA_C	PF08784.6	gi|332797057|ref|YP_004458557.1|	-	0.089	13.2	0.0	0.11	12.8	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF1462	PF07315.6	gi|332797058|ref|YP_004458558.1|	-	0.078	12.9	0.4	0.12	12.3	0.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1462)
tRNA-synt_1d	PF00750.14	gi|332797060|ref|YP_004458560.1|	-	1.9e-42	145.3	5.1	5.5e-21	74.7	3.1	2.2	1	1	1	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|332797060|ref|YP_004458560.1|	-	1.5e-27	95.9	1.5	5.2e-27	94.1	0.0	2.6	3	0	0	3	3	3	1	DALR	anticodon	binding	domain
tRNA-synt_1g	PF09334.6	gi|332797060|ref|YP_004458560.1|	-	0.0041	15.8	3.4	0.057	12.0	0.0	3.6	4	0	0	4	4	4	1	tRNA	synthetases	class	I	(M)
Hydantoinase_B	PF02538.9	gi|332797060|ref|YP_004458560.1|	-	0.0049	15.1	1.4	0.0098	14.1	1.0	1.4	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
tRNA-synt_1e	PF01406.14	gi|332797060|ref|YP_004458560.1|	-	0.013	14.6	3.1	0.26	10.3	0.0	3.0	3	1	0	3	3	3	0	tRNA	synthetases	class	I	(C)	catalytic	domain
DUF445	PF04286.7	gi|332797060|ref|YP_004458560.1|	-	0.12	11.8	7.4	2.5	7.5	0.3	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF445)
MitMem_reg	PF13012.1	gi|332797060|ref|YP_004458560.1|	-	2.1	8.4	6.9	1.4	9.0	0.1	3.6	3	1	1	4	4	4	0	Maintenance	of	mitochondrial	structure	and	function
DUF1059	PF06348.6	gi|332797061|ref|YP_004458561.1|	-	2.3e-53	177.8	1.0	8e-27	92.8	0.1	2.0	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1059)
A_thal_3526	PF09713.5	gi|332797061|ref|YP_004458561.1|	-	0.022	14.8	0.1	0.41	10.8	0.0	2.2	2	0	0	2	2	2	0	Plant	protein	1589	of	unknown	function	(A_thal_3526)
OKR_DC_1_N	PF03709.10	gi|332797061|ref|YP_004458561.1|	-	0.043	13.8	0.0	4.5	7.3	0.0	2.3	1	1	1	2	2	2	0	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
PemK	PF02452.12	gi|332797061|ref|YP_004458561.1|	-	0.055	13.6	0.7	2.1	8.5	0.1	2.1	2	0	0	2	2	2	0	PemK-like	protein
PqqA	PF08042.6	gi|332797061|ref|YP_004458561.1|	-	0.39	10.4	1.4	28	4.5	0.1	2.4	2	0	0	2	2	2	0	PqqA	family
Ribonuc_red_lgC	PF02867.10	gi|332797062|ref|YP_004458562.1|	-	1.4e-173	578.3	0.0	1.8e-173	577.9	0.0	1.1	1	0	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|332797062|ref|YP_004458562.1|	-	2.1e-30	104.3	0.2	4.8e-30	103.1	0.2	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|332797062|ref|YP_004458562.1|	-	2.9e-12	46.8	2.0	7e-12	45.6	0.9	2.1	2	0	0	2	2	2	1	ATP	cone	domain
HTH_3	PF01381.17	gi|332797063|ref|YP_004458563.1|	-	3.9e-05	23.4	0.0	6e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix
DUF506	PF04720.7	gi|332797063|ref|YP_004458563.1|	-	0.00098	18.8	0.0	0.0017	17.9	0.0	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF506)
HTH_37	PF13744.1	gi|332797063|ref|YP_004458563.1|	-	0.0091	15.7	0.0	0.016	14.9	0.0	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF134	PF02001.11	gi|332797063|ref|YP_004458563.1|	-	0.012	15.4	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF134
Sigma70_r4_2	PF08281.7	gi|332797063|ref|YP_004458563.1|	-	0.013	14.9	0.0	0.028	13.8	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_23	PF13384.1	gi|332797063|ref|YP_004458563.1|	-	0.067	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
DUF3829	PF12889.2	gi|332797063|ref|YP_004458563.1|	-	0.075	12.2	0.1	0.097	11.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
HTH_28	PF13518.1	gi|332797063|ref|YP_004458563.1|	-	0.11	12.5	0.0	0.27	11.2	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
Myb_DNA-binding	PF00249.26	gi|332797063|ref|YP_004458563.1|	-	0.15	12.1	0.0	0.29	11.1	0.0	1.5	1	0	0	1	1	1	0	Myb-like	DNA-binding	domain
GatB_N	PF02934.10	gi|332797065|ref|YP_004458565.1|	-	8.7e-79	264.3	0.0	1.3e-78	263.7	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|332797065|ref|YP_004458565.1|	-	3.3e-21	75.5	1.6	8.2e-21	74.2	1.1	1.7	1	0	0	1	1	1	1	GatB	domain
GAD	PF02938.9	gi|332797065|ref|YP_004458565.1|	-	7.1e-13	48.5	1.5	3.7e-12	46.2	0.0	2.4	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.5	gi|332797065|ref|YP_004458565.1|	-	3.3e-06	27.0	2.0	1.3e-05	25.0	1.4	2.1	1	1	0	1	1	1	1	Yqey-like	protein
tRNA_synt_1c_R1	PF04558.10	gi|332797065|ref|YP_004458565.1|	-	0.00043	19.8	1.6	0.002	17.6	0.3	2.5	3	0	0	3	3	3	1	Glutaminyl-tRNA	synthetase,	non-specific	RNA	binding	region	part	1
IF2_N	PF04760.10	gi|332797065|ref|YP_004458565.1|	-	0.032	13.8	1.6	38	4.0	0.0	4.3	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
Asparaginase	PF00710.15	gi|332797066|ref|YP_004458566.1|	-	1.7e-91	306.3	0.0	2.1e-91	306.0	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
DUF460	PF04312.8	gi|332797066|ref|YP_004458566.1|	-	0.043	13.3	0.2	0.18	11.3	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF460)
CW_binding_2	PF04122.7	gi|332797066|ref|YP_004458566.1|	-	0.43	10.8	3.5	1.4	9.2	0.0	2.5	2	0	0	2	2	2	0	Putative	cell	wall	binding	repeat	2
Ribosomal_S30	PF04758.9	gi|332797067|ref|YP_004458567.1|	-	1.2e-11	44.1	3.8	1.5e-11	43.8	2.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Nop	PF01798.13	gi|332797068|ref|YP_004458568.1|	-	1.6e-54	183.2	0.1	3.1e-54	182.3	0.1	1.4	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|332797068|ref|YP_004458568.1|	-	1.4e-24	85.6	0.1	3.4e-24	84.3	0.1	1.7	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
Fibrillarin	PF01269.12	gi|332797069|ref|YP_004458569.1|	-	1.1e-99	331.9	0.0	1.3e-99	331.7	0.0	1.0	1	0	0	1	1	1	1	Fibrillarin
PCMT	PF01135.14	gi|332797069|ref|YP_004458569.1|	-	0.00064	19.3	0.1	0.0015	18.0	0.0	1.7	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|332797069|ref|YP_004458569.1|	-	0.026	14.0	0.0	0.055	13.0	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|332797069|ref|YP_004458569.1|	-	0.049	13.6	0.0	0.093	12.7	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
DREV	PF05219.7	gi|332797069|ref|YP_004458569.1|	-	0.13	11.1	0.0	0.3	9.9	0.0	1.6	2	0	0	2	2	2	0	DREV	methyltransferase
DUF61	PF01886.11	gi|332797070|ref|YP_004458570.1|	-	5.4e-24	84.5	0.2	6.4e-24	84.2	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
HTH_3	PF01381.17	gi|332797071|ref|YP_004458571.1|	-	1.7e-12	46.9	0.0	1.5e-11	43.9	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.2	gi|332797071|ref|YP_004458571.1|	-	3.4e-10	39.8	0.4	3.4e-09	36.6	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|332797071|ref|YP_004458571.1|	-	4.5e-05	23.5	0.0	7.7e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|332797071|ref|YP_004458571.1|	-	0.00018	21.7	0.1	0.00085	19.5	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|332797071|ref|YP_004458571.1|	-	0.00024	20.5	0.0	0.0018	17.7	0.0	2.4	2	0	0	2	2	2	1	MerR	family	regulatory	protein
HTH_26	PF13443.1	gi|332797071|ref|YP_004458571.1|	-	0.00033	20.8	0.0	0.0007	19.7	0.0	1.6	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_7	PF02796.10	gi|332797071|ref|YP_004458571.1|	-	0.00077	19.2	0.1	0.044	13.6	0.0	2.6	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
MerR_1	PF13411.1	gi|332797071|ref|YP_004458571.1|	-	0.0012	18.5	0.0	0.0074	16.0	0.0	2.4	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
Hjc	PF01870.13	gi|332797071|ref|YP_004458571.1|	-	0.0021	17.6	3.3	0.057	13.0	0.2	2.9	2	2	0	2	2	2	1	Archaeal	holliday	junction	resolvase	(hjc)
HTH_22	PF13309.1	gi|332797071|ref|YP_004458571.1|	-	0.0023	17.6	3.6	0.0031	17.2	0.0	2.9	4	0	0	4	4	3	1	HTH	domain
HTH_23	PF13384.1	gi|332797071|ref|YP_004458571.1|	-	0.0029	17.1	0.0	0.011	15.3	0.0	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
LacI	PF00356.16	gi|332797071|ref|YP_004458571.1|	-	0.0043	16.6	0.0	0.25	10.9	0.0	2.9	2	1	1	3	3	3	1	Bacterial	regulatory	proteins,	lacI	family
HTH_11	PF08279.7	gi|332797071|ref|YP_004458571.1|	-	0.0058	16.2	0.4	0.62	9.7	0.0	3.9	4	1	0	4	4	4	1	HTH	domain
HTH_8	PF02954.14	gi|332797071|ref|YP_004458571.1|	-	0.0064	16.0	0.0	0.012	15.0	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
Phage_AlpA	PF05930.7	gi|332797071|ref|YP_004458571.1|	-	0.0098	15.6	0.0	0.02	14.5	0.0	1.4	1	0	0	1	1	1	1	Prophage	CP4-57	regulatory	protein	(AlpA)
NapD	PF03927.8	gi|332797071|ref|YP_004458571.1|	-	0.01	15.6	0.9	0.022	14.5	0.2	1.9	2	0	0	2	2	2	0	NapD	protein
HTH_38	PF13936.1	gi|332797071|ref|YP_004458571.1|	-	0.012	15.1	0.2	0.044	13.3	0.0	2.0	2	0	0	2	2	1	0	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|332797071|ref|YP_004458571.1|	-	0.015	15.1	0.9	0.089	12.6	0.0	2.9	4	0	0	4	4	2	0	NUMOD1	domain
Terminase_5	PF06056.7	gi|332797071|ref|YP_004458571.1|	-	0.029	13.9	0.0	0.097	12.2	0.0	1.9	2	0	0	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HSDR_N_2	PF13588.1	gi|332797071|ref|YP_004458571.1|	-	0.044	13.5	4.0	0.48	10.2	0.3	2.4	2	0	0	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
Mrr_cat	PF04471.7	gi|332797071|ref|YP_004458571.1|	-	0.062	13.1	1.9	0.43	10.4	0.1	2.5	2	1	0	2	2	2	0	Restriction	endonuclease
ACT_5	PF13710.1	gi|332797071|ref|YP_004458571.1|	-	0.077	12.8	0.1	0.56	10.0	0.0	2.4	2	0	0	2	2	2	0	ACT	domain
TrkA_N	PF02254.13	gi|332797071|ref|YP_004458571.1|	-	0.094	12.7	1.2	1.3	9.0	0.2	2.8	2	1	0	2	2	2	0	TrkA-N	domain
TetR_N	PF00440.18	gi|332797071|ref|YP_004458571.1|	-	0.11	12.1	0.0	0.26	10.9	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
HTH_28	PF13518.1	gi|332797071|ref|YP_004458571.1|	-	0.15	12.1	0.0	0.84	9.6	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF724	PF05266.9	gi|332797071|ref|YP_004458571.1|	-	0.4	10.2	3.5	8.6	5.9	0.1	2.7	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF724)
MRL1	PF13003.2	gi|332797071|ref|YP_004458571.1|	-	0.47	10.2	7.4	0.19	11.5	0.4	2.5	2	1	0	2	2	2	0	Ribosomal	protein	L1
TRM	PF02005.11	gi|332797072|ref|YP_004458572.1|	-	3.9e-96	322.2	0.0	4.4e-96	322.0	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Zn-ribbon_8	PF09723.5	gi|332797072|ref|YP_004458572.1|	-	0.0017	18.2	3.7	0.0043	16.9	2.6	1.7	1	0	0	1	1	1	1	Zinc	ribbon	domain
Methyltransf_31	PF13847.1	gi|332797072|ref|YP_004458572.1|	-	0.0022	17.6	0.1	0.0053	16.3	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
HypA	PF01155.14	gi|332797072|ref|YP_004458572.1|	-	0.0054	16.4	0.0	0.01	15.4	0.0	1.4	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DUF4373	PF14297.1	gi|332797072|ref|YP_004458572.1|	-	0.034	14.4	0.2	0.11	12.8	0.1	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4373)
DUF3797	PF12677.2	gi|332797072|ref|YP_004458572.1|	-	0.14	11.8	0.8	0.9	9.2	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zinc_ribbon_4	PF13717.1	gi|332797072|ref|YP_004458572.1|	-	0.6	9.8	5.5	6.5	6.5	0.0	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332797072|ref|YP_004458572.1|	-	0.7	9.5	5.6	7.3	6.2	0.0	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332797072|ref|YP_004458572.1|	-	1.5	8.4	4.1	9	6.0	0.1	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-FPG_IleRS	PF06827.9	gi|332797072|ref|YP_004458572.1|	-	3.4	7.3	5.6	0.27	10.9	0.3	1.8	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ribbon_3	PF13248.1	gi|332797072|ref|YP_004458572.1|	-	4.6	6.5	6.3	13	5.1	4.4	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
RNA_pol_Rpc34	PF05158.7	gi|332797073|ref|YP_004458573.1|	-	2e-09	37.1	6.6	0.00024	20.3	0.2	2.0	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
HTH_24	PF13412.1	gi|332797073|ref|YP_004458573.1|	-	2.7e-07	29.8	0.8	4.5e-07	29.1	0.5	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
B-block_TFIIIC	PF04182.7	gi|332797073|ref|YP_004458573.1|	-	2e-06	27.5	0.5	3e-06	26.9	0.3	1.2	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
MarR_2	PF12802.2	gi|332797073|ref|YP_004458573.1|	-	0.00025	20.6	0.0	0.00035	20.1	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|332797073|ref|YP_004458573.1|	-	0.00042	19.9	0.2	0.00064	19.3	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_3	PF01381.17	gi|332797073|ref|YP_004458573.1|	-	0.00079	19.2	0.8	0.0023	17.7	0.2	2.1	1	1	1	2	2	2	1	Helix-turn-helix
TFIIE_alpha	PF02002.12	gi|332797073|ref|YP_004458573.1|	-	0.0048	16.3	0.3	0.0059	16.0	0.2	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
RPA_C	PF08784.6	gi|332797073|ref|YP_004458573.1|	-	0.034	14.5	0.2	0.066	13.6	0.1	1.5	1	1	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_Crp_2	PF13545.1	gi|332797073|ref|YP_004458573.1|	-	0.076	12.8	0.2	0.16	11.8	0.1	1.5	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
ATPgrasp_ST	PF14397.1	gi|332797073|ref|YP_004458573.1|	-	0.088	11.8	0.3	0.11	11.6	0.2	1.1	1	0	0	1	1	1	0	Sugar-transfer	associated	ATP-grasp
TrmB	PF01978.14	gi|332797073|ref|YP_004458573.1|	-	0.089	12.5	0.7	0.13	11.9	0.5	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
TFIIB	PF00382.14	gi|332797074|ref|YP_004458574.1|	-	2.5e-23	81.6	0.2	4e-12	45.7	0.0	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|332797074|ref|YP_004458574.1|	-	3.3e-19	67.9	0.9	5.1e-19	67.3	0.7	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.11	gi|332797074|ref|YP_004458574.1|	-	0.00014	21.0	0.0	0.00047	19.4	0.0	1.9	1	0	0	1	1	1	1	Sigma-70,	region	4
RRN7	PF11781.3	gi|332797074|ref|YP_004458574.1|	-	0.0011	18.4	0.4	0.0017	17.8	0.3	1.3	1	0	0	1	1	1	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
GerE	PF00196.14	gi|332797074|ref|YP_004458574.1|	-	0.002	17.3	0.4	0.0078	15.5	0.3	1.9	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
A2L_zn_ribbon	PF08792.5	gi|332797074|ref|YP_004458574.1|	-	0.003	16.9	0.5	0.0067	15.8	0.3	1.6	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Sigma70_r4_2	PF08281.7	gi|332797074|ref|YP_004458574.1|	-	0.0032	16.8	0.1	0.0084	15.5	0.1	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_11	PF08279.7	gi|332797074|ref|YP_004458574.1|	-	0.0049	16.4	0.5	0.024	14.2	0.1	2.2	2	0	0	2	2	2	1	HTH	domain
Prim_Zn_Ribbon	PF08273.7	gi|332797074|ref|YP_004458574.1|	-	0.0099	15.9	0.3	0.018	15.1	0.2	1.4	1	0	0	1	1	1	1	Zinc-binding	domain	of	primase-helicase
Lar_restr_allev	PF14354.1	gi|332797074|ref|YP_004458574.1|	-	0.023	14.9	0.3	0.041	14.1	0.2	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
HTH_23	PF13384.1	gi|332797074|ref|YP_004458574.1|	-	0.035	13.7	0.0	0.11	12.2	0.0	1.8	1	0	0	1	1	1	0	Homeodomain-like	domain
zf-ribbon_3	PF13248.1	gi|332797074|ref|YP_004458574.1|	-	0.037	13.2	0.4	0.72	9.1	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
HTH_24	PF13412.1	gi|332797074|ref|YP_004458574.1|	-	0.053	12.9	1.4	0.58	9.5	0.0	2.9	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
HTH_Mga	PF08280.6	gi|332797074|ref|YP_004458574.1|	-	0.062	13.0	0.4	0.97	9.2	0.0	2.7	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
OrfB_Zn_ribbon	PF07282.6	gi|332797074|ref|YP_004458574.1|	-	0.08	12.6	0.4	0.17	11.5	0.2	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
HTH_AsnC-type	PF13404.1	gi|332797074|ref|YP_004458574.1|	-	0.11	12.1	0.0	0.42	10.1	0.0	2.1	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Ribosomal_S27e	PF01667.12	gi|332797074|ref|YP_004458574.1|	-	0.12	11.9	0.1	0.21	11.1	0.1	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
zf-Mss51	PF13824.1	gi|332797074|ref|YP_004458574.1|	-	0.13	12.1	0.8	0.37	10.6	0.4	1.8	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Zn_Tnp_IS1595	PF12760.2	gi|332797074|ref|YP_004458574.1|	-	0.14	11.9	0.8	0.27	11.0	0.5	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|332797074|ref|YP_004458574.1|	-	0.93	9.3	4.7	0.29	10.9	1.0	1.9	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Gar1	PF04410.9	gi|332797075|ref|YP_004458575.1|	-	2.4e-05	23.8	0.1	2.8e-05	23.6	0.1	1.2	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|332797075|ref|YP_004458575.1|	-	0.012	15.4	0.4	0.019	14.8	0.2	1.6	1	1	0	1	1	1	0	PRC-barrel	domain
Reo_sigmaC	PF04582.7	gi|332797076|ref|YP_004458576.1|	-	0.00042	19.6	6.1	0.017	14.3	0.7	2.1	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
Flagellin_C	PF00700.16	gi|332797076|ref|YP_004458576.1|	-	0.00054	20.0	12.2	0.012	15.7	0.5	4.3	3	1	1	4	4	4	1	Bacterial	flagellin	C-terminal	helical	region
EzrA	PF06160.7	gi|332797076|ref|YP_004458576.1|	-	0.00081	17.6	38.6	0.019	13.1	9.3	3.2	1	1	0	2	2	2	2	Septation	ring	formation	regulator,	EzrA
AAA_13	PF13166.1	gi|332797076|ref|YP_004458576.1|	-	0.0011	17.5	36.2	0.0011	17.5	25.1	2.1	1	1	1	2	2	2	1	AAA	domain
MscS_porin	PF12795.2	gi|332797076|ref|YP_004458576.1|	-	0.0011	18.3	35.1	0.063	12.5	11.3	2.6	1	1	1	2	2	2	2	Mechanosensitive	ion	channel	porin	domain
DUF2968	PF11180.3	gi|332797076|ref|YP_004458576.1|	-	0.0014	18.0	3.2	0.0014	18.0	2.2	3.4	2	2	1	3	3	3	1	Protein	of	unknown	function	(DUF2968)
Baculo_PEP_C	PF04513.7	gi|332797076|ref|YP_004458576.1|	-	0.0017	18.1	20.3	0.014	15.1	3.7	3.3	1	1	2	4	4	4	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
CENP-F_leu_zip	PF10473.4	gi|332797076|ref|YP_004458576.1|	-	0.0048	16.7	10.4	0.0048	16.7	7.2	4.3	1	1	2	4	4	4	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
IncA	PF04156.9	gi|332797076|ref|YP_004458576.1|	-	0.0066	16.0	46.6	0.01	15.4	7.8	2.7	1	1	0	2	2	2	1	IncA	protein
GrpE	PF01025.14	gi|332797076|ref|YP_004458576.1|	-	0.0087	15.6	8.0	0.0087	15.6	5.6	3.9	1	1	3	4	4	4	1	GrpE
DUF3166	PF11365.3	gi|332797076|ref|YP_004458576.1|	-	0.016	15.6	4.7	0.016	15.6	3.2	4.1	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3166)
DUF948	PF06103.6	gi|332797076|ref|YP_004458576.1|	-	0.019	14.7	4.1	0.019	14.7	2.8	4.0	2	2	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
Spc7	PF08317.6	gi|332797076|ref|YP_004458576.1|	-	0.04	12.5	52.5	0.11	11.1	12.6	2.8	1	1	2	3	3	3	0	Spc7	kinetochore	protein
WEMBL	PF05701.6	gi|332797076|ref|YP_004458576.1|	-	0.042	12.3	44.2	0.17	10.3	5.9	3.1	1	1	2	3	3	3	0	Weak	chloroplast	movement	under	blue	light
Bacillus_HBL	PF05791.6	gi|332797076|ref|YP_004458576.1|	-	0.071	12.4	34.5	0.025	13.9	4.2	3.4	2	2	2	4	4	4	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF1664	PF07889.7	gi|332797076|ref|YP_004458576.1|	-	0.099	12.4	35.0	0.81	9.4	5.3	4.4	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1664)
IFT57	PF10498.4	gi|332797076|ref|YP_004458576.1|	-	0.13	11.0	42.9	0.07	11.8	10.7	2.8	1	1	2	3	3	3	0	Intra-flagellar	transport	protein	57
PilJ	PF13675.1	gi|332797076|ref|YP_004458576.1|	-	0.17	12.1	10.2	0.92	9.8	0.9	3.7	1	1	3	4	4	4	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
APG6	PF04111.7	gi|332797076|ref|YP_004458576.1|	-	0.23	10.4	48.6	0.054	12.5	11.5	3.1	1	1	2	3	3	3	0	Autophagy	protein	Apg6
TMP_2	PF06791.8	gi|332797076|ref|YP_004458576.1|	-	0.26	10.8	9.7	2	8.0	0.2	2.7	2	1	0	2	2	2	0	Prophage	tail	length	tape	measure	protein
DUF3450	PF11932.3	gi|332797076|ref|YP_004458576.1|	-	0.32	10.2	30.0	0.29	10.3	5.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
DUF4140	PF13600.1	gi|332797076|ref|YP_004458576.1|	-	0.36	11.3	29.3	0.044	14.2	2.4	4.5	1	1	3	4	4	4	0	N-terminal	domain	of	unknown	function	(DUF4140)
GAS	PF13851.1	gi|332797076|ref|YP_004458576.1|	-	0.38	9.9	56.5	3.8	6.6	13.0	3.0	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Filament	PF00038.16	gi|332797076|ref|YP_004458576.1|	-	0.42	10.0	40.3	0.51	9.7	7.8	3.1	1	1	1	2	2	2	0	Intermediate	filament	protein
TBPIP	PF07106.8	gi|332797076|ref|YP_004458576.1|	-	0.64	9.5	53.0	1.1	8.8	8.3	4.3	1	1	3	4	4	4	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Laminin_II	PF06009.7	gi|332797076|ref|YP_004458576.1|	-	0.69	9.6	36.1	0.13	12.0	7.0	3.2	1	1	2	3	3	3	0	Laminin	Domain	II
NPV_P10	PF05531.7	gi|332797076|ref|YP_004458576.1|	-	0.78	10.0	22.6	0.36	11.0	2.5	4.1	2	1	0	2	2	1	0	Nucleopolyhedrovirus	P10	protein
MtrB	PF05440.7	gi|332797076|ref|YP_004458576.1|	-	0.8	9.7	6.3	2.3	8.3	0.1	3.8	2	2	2	5	5	5	0	Tetrahydromethanopterin	S-methyltransferase	subunit	B
Mnd1	PF03962.10	gi|332797076|ref|YP_004458576.1|	-	0.9	9.1	46.0	1.1	8.8	5.5	4.0	1	1	3	4	4	4	0	Mnd1	family
CobN-Mg_chel	PF02514.11	gi|332797076|ref|YP_004458576.1|	-	0.9	6.8	17.6	1.2	6.4	12.2	1.1	1	0	0	1	1	1	0	CobN/Magnesium	Chelatase
AIP3	PF03915.8	gi|332797076|ref|YP_004458576.1|	-	1.1	8.0	37.4	0.17	10.7	11.0	2.9	1	1	2	3	3	3	0	Actin	interacting	protein	3
DUF4201	PF13870.1	gi|332797076|ref|YP_004458576.1|	-	1.2	8.4	49.7	1.1	8.6	10.7	3.6	1	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4201)
MCPsignal	PF00015.16	gi|332797076|ref|YP_004458576.1|	-	1.3	8.4	20.1	5.5	6.4	6.7	2.9	1	1	1	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
TPR_MLP1_2	PF07926.7	gi|332797076|ref|YP_004458576.1|	-	1.4	8.7	46.3	5.2	6.8	10.9	3.7	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
DUF3584	PF12128.3	gi|332797076|ref|YP_004458576.1|	-	2.9	5.1	39.4	0.71	7.1	12.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
Cytochrom_C_2	PF01322.15	gi|332797076|ref|YP_004458576.1|	-	3.4	8.2	10.4	14	6.1	0.2	3.3	2	1	1	3	3	3	0	Cytochrome	C'
DUF479	PF04336.7	gi|332797076|ref|YP_004458576.1|	-	3.7	7.7	10.0	1.5	8.9	1.4	3.2	2	1	2	4	4	3	0	Protein	of	unknown	function,	DUF479
CALCOCO1	PF07888.6	gi|332797076|ref|YP_004458576.1|	-	3.9	5.6	44.7	42	2.2	30.9	1.9	1	1	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
Sec34	PF04136.10	gi|332797076|ref|YP_004458576.1|	-	5.3	6.7	21.6	2.7	7.6	2.5	2.8	2	1	0	2	2	2	0	Sec34-like	family
Seryl_tRNA_N	PF02403.17	gi|332797076|ref|YP_004458576.1|	-	5.3	7.1	57.7	0.21	11.6	5.5	5.0	1	1	3	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
RmuC	PF02646.11	gi|332797076|ref|YP_004458576.1|	-	7.9	5.2	32.1	2.7	6.7	4.3	3.8	2	2	2	4	4	4	0	RmuC	family
AAA_32	PF13654.1	gi|332797076|ref|YP_004458576.1|	-	10	4.6	35.9	4.1	5.9	4.2	3.4	1	1	2	3	3	3	0	AAA	domain
DUF373	PF04123.8	gi|332797077|ref|YP_004458577.1|	-	4e-96	322.0	18.9	4.8e-96	321.7	13.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
DUF4117	PF13491.1	gi|332797077|ref|YP_004458577.1|	-	0.012	15.0	5.5	0.024	14.0	3.8	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4117)
SRP54	PF00448.17	gi|332797077|ref|YP_004458577.1|	-	0.034	13.5	1.1	0.17	11.3	0.2	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
IGPD	PF00475.13	gi|332797077|ref|YP_004458577.1|	-	0.061	13.1	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	Imidazoleglycerol-phosphate	dehydratase
TBP	PF00352.16	gi|332797079|ref|YP_004458579.1|	-	2.3e-61	203.1	0.3	4.8e-35	118.7	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|332797079|ref|YP_004458579.1|	-	2.9e-05	24.0	0.0	0.31	11.1	0.0	2.5	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
Spore_YhaL	PF14147.1	gi|332797079|ref|YP_004458579.1|	-	0.065	12.6	0.8	1.7	8.1	0.1	2.9	3	0	0	3	3	3	0	Sporulation	protein	YhaL
HTH_11	PF08279.7	gi|332797079|ref|YP_004458579.1|	-	0.14	11.7	0.7	0.33	10.6	0.5	1.6	1	0	0	1	1	1	0	HTH	domain
Metallophos_2	PF12850.2	gi|332797080|ref|YP_004458580.1|	-	1.4e-05	24.9	0.4	2.4e-05	24.2	0.3	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|332797080|ref|YP_004458580.1|	-	0.00058	19.3	2.4	0.0019	17.6	1.7	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
TP_methylase	PF00590.15	gi|332797081|ref|YP_004458581.1|	-	6.2e-24	84.8	0.0	7.4e-24	84.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF357	PF04010.8	gi|332797082|ref|YP_004458582.1|	-	5.3e-16	58.0	0.7	1.2e-15	56.9	0.2	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|332797082|ref|YP_004458582.1|	-	2.3e-14	53.7	0.2	7.3e-14	52.1	0.2	1.8	1	1	0	1	1	1	1	Cytidylyltransferase
Ribosomal_L12	PF00542.14	gi|332797082|ref|YP_004458582.1|	-	0.084	12.8	0.1	0.24	11.4	0.1	1.8	1	1	0	1	1	1	0	Ribosomal	protein	L7/L12	C-terminal	domain
CTP-dep_RFKase	PF01982.11	gi|332797083|ref|YP_004458583.1|	-	1.3e-42	144.2	0.0	2.5e-42	143.3	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HTH_24	PF13412.1	gi|332797083|ref|YP_004458583.1|	-	4.9e-10	38.6	1.7	9.1e-10	37.7	1.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|332797083|ref|YP_004458583.1|	-	2.3e-07	30.3	0.4	4e-07	29.6	0.3	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|332797083|ref|YP_004458583.1|	-	7.9e-07	28.6	1.7	1.4e-06	27.8	1.2	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_27	PF13463.1	gi|332797083|ref|YP_004458583.1|	-	1.5e-06	28.4	0.2	2.9e-06	27.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|332797083|ref|YP_004458583.1|	-	2.3e-06	27.1	0.1	1e-05	25.0	0.0	1.9	2	0	0	2	2	2	1	MarR	family
HTH_Crp_2	PF13545.1	gi|332797083|ref|YP_004458583.1|	-	7e-06	25.7	0.4	1.5e-05	24.6	0.3	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|332797083|ref|YP_004458583.1|	-	7e-05	22.2	0.6	0.00013	21.3	0.4	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_45	PF14947.1	gi|332797083|ref|YP_004458583.1|	-	0.00013	21.7	0.8	0.0002	21.1	0.6	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|332797083|ref|YP_004458583.1|	-	0.00019	21.0	1.1	0.00032	20.3	0.8	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
TrmB	PF01978.14	gi|332797083|ref|YP_004458583.1|	-	0.00036	20.1	0.2	0.00067	19.3	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_1	PF00126.22	gi|332797083|ref|YP_004458583.1|	-	0.00041	20.0	0.0	0.00077	19.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_20	PF12840.2	gi|332797083|ref|YP_004458583.1|	-	0.00043	20.0	0.0	0.00073	19.2	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
RepL	PF05732.6	gi|332797083|ref|YP_004458583.1|	-	0.00048	19.3	0.2	0.00073	18.7	0.1	1.3	1	0	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_5	PF01022.15	gi|332797083|ref|YP_004458583.1|	-	0.00063	19.3	0.1	0.0011	18.5	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF4364	PF14277.1	gi|332797083|ref|YP_004458583.1|	-	0.00064	19.3	0.6	0.001	18.7	0.4	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
B-block_TFIIIC	PF04182.7	gi|332797083|ref|YP_004458583.1|	-	0.0007	19.4	0.1	0.0012	18.6	0.1	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
Arg_repressor	PF01316.16	gi|332797083|ref|YP_004458583.1|	-	0.0009	18.7	0.6	0.0018	17.8	0.4	1.5	1	0	0	1	1	1	1	Arginine	repressor,	DNA	binding	domain
HTH_36	PF13730.1	gi|332797083|ref|YP_004458583.1|	-	0.0011	19.0	0.1	0.0026	17.8	0.1	1.7	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_4	PF13613.1	gi|332797083|ref|YP_004458583.1|	-	0.0022	17.4	0.0	0.0077	15.7	0.0	2.0	2	0	0	2	2	1	1	Helix-turn-helix	of	DDE	superfamily	endonuclease
HTH_AsnC-type	PF13404.1	gi|332797083|ref|YP_004458583.1|	-	0.0023	17.4	0.0	0.0047	16.4	0.0	1.6	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HxlR	PF01638.12	gi|332797083|ref|YP_004458583.1|	-	0.0036	16.8	0.3	0.0089	15.6	0.2	1.7	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
FUR	PF01475.14	gi|332797083|ref|YP_004458583.1|	-	0.004	17.0	0.1	0.0061	16.4	0.1	1.3	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
DDRGK	PF09756.4	gi|332797083|ref|YP_004458583.1|	-	0.0064	15.9	2.5	0.011	15.1	1.7	1.3	1	0	0	1	1	1	1	DDRGK	domain
Fe_dep_repress	PF01325.14	gi|332797083|ref|YP_004458583.1|	-	0.0087	15.9	0.1	0.016	15.1	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF505	PF04458.7	gi|332797083|ref|YP_004458583.1|	-	0.0089	14.2	0.1	0.012	13.7	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
HTH_28	PF13518.1	gi|332797083|ref|YP_004458583.1|	-	0.011	15.7	0.0	0.024	14.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|332797083|ref|YP_004458583.1|	-	0.011	15.5	0.3	0.023	14.5	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain	of	resolvase
HemN_C	PF06969.11	gi|332797083|ref|YP_004458583.1|	-	0.019	15.0	0.1	0.034	14.2	0.1	1.4	1	0	0	1	1	1	0	HemN	C-terminal	domain
HTH_34	PF13601.1	gi|332797083|ref|YP_004458583.1|	-	0.019	14.9	0.3	0.069	13.1	0.3	1.8	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4312	PF14189.1	gi|332797083|ref|YP_004458583.1|	-	0.024	14.4	0.6	0.049	13.4	0.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4312)
HTH_37	PF13744.1	gi|332797083|ref|YP_004458583.1|	-	0.026	14.3	0.2	0.058	13.2	0.2	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF977	PF06163.6	gi|332797083|ref|YP_004458583.1|	-	0.029	14.1	0.1	0.063	13.0	0.1	1.5	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
Rrf2	PF02082.15	gi|332797083|ref|YP_004458583.1|	-	0.033	14.3	0.1	0.054	13.6	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
GntR	PF00392.16	gi|332797083|ref|YP_004458583.1|	-	0.039	13.3	0.1	0.072	12.5	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF2250	PF10007.4	gi|332797083|ref|YP_004458583.1|	-	0.041	13.7	0.3	0.07	13.0	0.2	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TFIIE_alpha	PF02002.12	gi|332797083|ref|YP_004458583.1|	-	0.043	13.3	0.9	0.076	12.5	0.6	1.4	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HAP1_N	PF04849.8	gi|332797083|ref|YP_004458583.1|	-	0.051	12.5	1.1	0.072	12.0	0.7	1.1	1	0	0	1	1	1	0	HAP1	N-terminal	conserved	region
Phage_rep_org_N	PF09681.5	gi|332797083|ref|YP_004458583.1|	-	0.067	12.7	0.4	0.11	12.0	0.3	1.3	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Sigma70_r4	PF04545.11	gi|332797083|ref|YP_004458583.1|	-	0.073	12.3	0.2	0.19	11.0	0.1	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
FeoC	PF09012.5	gi|332797083|ref|YP_004458583.1|	-	0.093	12.4	0.2	0.17	11.6	0.1	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Phage_CI_repr	PF07022.8	gi|332797083|ref|YP_004458583.1|	-	0.15	12.1	0.0	0.26	11.3	0.0	1.3	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
UN_NPL4	PF11543.3	gi|332797083|ref|YP_004458583.1|	-	0.18	12.1	1.4	6.8	7.0	0.0	2.5	1	1	1	2	2	2	0	Nuclear	pore	localisation	protein	NPL4
Wyosine_form	PF08608.7	gi|332797084|ref|YP_004458584.1|	-	3.9e-22	78.1	0.2	9.1e-22	76.9	0.0	1.8	2	0	0	2	2	2	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|332797084|ref|YP_004458584.1|	-	6.4e-20	71.9	0.1	2.8e-19	69.8	0.1	2.0	1	1	0	1	1	1	1	Radical	SAM	superfamily
Amidase	PF01425.16	gi|332797085|ref|YP_004458585.1|	-	4.5e-137	457.5	0.0	5.1e-137	457.3	0.0	1.0	1	0	0	1	1	1	1	Amidase
Glu-tRNAGln	PF02686.10	gi|332797086|ref|YP_004458586.1|	-	1.1e-18	66.7	0.1	1.6e-18	66.2	0.1	1.3	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
PhnI	PF05861.7	gi|332797086|ref|YP_004458586.1|	-	0.014	13.9	0.0	0.015	13.7	0.0	1.0	1	0	0	1	1	1	0	Bacterial	phosphonate	metabolism	protein	(PhnI)
SporV_AA	PF12164.3	gi|332797086|ref|YP_004458586.1|	-	0.034	14.1	1.4	0.052	13.5	0.9	1.3	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AA
CutA1	PF03091.10	gi|332797087|ref|YP_004458587.1|	-	1.2e-39	134.1	0.3	1.3e-39	133.9	0.2	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
UPF0086	PF01868.11	gi|332797087|ref|YP_004458587.1|	-	0.061	12.9	0.0	0.086	12.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	UPF0086
ResIII	PF04851.10	gi|332797089|ref|YP_004458589.1|	-	1.6e-22	80.2	0.3	1.6e-22	80.2	0.2	2.5	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|332797089|ref|YP_004458589.1|	-	1.8e-16	59.7	0.5	9.1e-16	57.4	0.1	2.4	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|332797089|ref|YP_004458589.1|	-	1.4e-09	37.7	0.6	8.5e-09	35.1	0.0	2.5	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|332797089|ref|YP_004458589.1|	-	2.1e-08	33.3	0.5	2.4e-07	29.8	0.3	2.3	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
AAA_22	PF13401.1	gi|332797089|ref|YP_004458589.1|	-	0.0016	18.6	0.0	0.008	16.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.4	gi|332797089|ref|YP_004458589.1|	-	0.0021	17.1	0.0	0.0053	15.7	0.0	1.6	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
KRAB	PF01352.22	gi|332797089|ref|YP_004458589.1|	-	0.039	13.3	0.3	0.3	10.5	0.0	2.5	2	0	0	2	2	2	0	KRAB	box
Arch_fla_DE	PF04659.8	gi|332797089|ref|YP_004458589.1|	-	0.043	13.6	0.1	2.7	7.8	0.1	2.7	2	0	0	2	2	2	0	Archaeal	flagella	protein
IstB_IS21	PF01695.12	gi|332797089|ref|YP_004458589.1|	-	0.045	13.1	0.1	6	6.2	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_11	PF13086.1	gi|332797089|ref|YP_004458589.1|	-	0.21	11.1	1.6	0.91	9.0	0.0	2.5	2	1	1	3	3	3	0	AAA	domain
DUF226	PF02890.9	gi|332797091|ref|YP_004458591.1|	-	0.059	13.1	0.5	0.063	13.0	0.4	1.1	1	0	0	1	1	1	0	Borrelia	family	of	unknown	function	DUF226
YjzC	PF14168.1	gi|332797092|ref|YP_004458592.1|	-	0.11	12.3	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	YjzC-like	protein
PKD	PF00801.15	gi|332797092|ref|YP_004458592.1|	-	0.14	11.9	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	PKD	domain
Alba	PF01918.16	gi|332797093|ref|YP_004458593.1|	-	2e-19	68.9	0.3	2.9e-19	68.4	0.2	1.2	1	0	0	1	1	1	1	Alba
Topoisom_bac	PF01131.15	gi|332797094|ref|YP_004458594.1|	-	4.5e-88	295.7	2.7	5.1e-88	295.6	1.0	1.7	2	0	0	2	2	2	1	DNA	topoisomerase
Toprim	PF01751.17	gi|332797094|ref|YP_004458594.1|	-	6.5e-21	74.1	0.0	2.7e-20	72.2	0.0	2.2	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|332797094|ref|YP_004458594.1|	-	1.5e-10	40.8	1.7	5.7e-10	38.9	0.3	2.7	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|332797094|ref|YP_004458594.1|	-	1.6e-06	28.1	0.0	4.7e-06	26.5	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Toprim_4	PF13662.1	gi|332797094|ref|YP_004458594.1|	-	0.00026	20.9	0.0	0.00094	19.1	0.0	2.0	1	0	0	1	1	1	1	Toprim	domain
zf-ribbon_3	PF13248.1	gi|332797094|ref|YP_004458594.1|	-	0.00073	18.6	3.8	0.1	11.8	0.3	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
SRP54	PF00448.17	gi|332797094|ref|YP_004458594.1|	-	0.0059	16.0	0.0	0.018	14.4	0.0	1.8	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_11	PF13086.1	gi|332797094|ref|YP_004458594.1|	-	0.011	15.2	0.1	0.031	13.8	0.1	1.8	1	0	0	1	1	1	0	AAA	domain
DZR	PF12773.2	gi|332797094|ref|YP_004458594.1|	-	0.016	15.0	3.9	0.26	11.1	0.2	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
AAA_22	PF13401.1	gi|332797094|ref|YP_004458594.1|	-	0.021	14.9	0.0	0.065	13.3	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|332797094|ref|YP_004458594.1|	-	0.044	13.5	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF1272	PF06906.6	gi|332797094|ref|YP_004458594.1|	-	0.16	11.8	2.2	4.8	7.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
HTH_45	PF14947.1	gi|332797094|ref|YP_004458594.1|	-	0.17	11.7	6.7	0.39	10.5	0.1	3.1	3	0	0	3	3	3	0	Winged	helix-turn-helix
DNA_ligase_ZBD	PF03119.11	gi|332797094|ref|YP_004458594.1|	-	0.23	11.2	2.1	14	5.5	0.1	2.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
AAA_30	PF13604.1	gi|332797094|ref|YP_004458594.1|	-	0.23	11.0	0.0	0.47	10.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Lar_restr_allev	PF14354.1	gi|332797094|ref|YP_004458594.1|	-	0.33	11.2	0.7	40	4.6	0.0	2.7	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-C2HC5	PF06221.8	gi|332797094|ref|YP_004458594.1|	-	0.83	9.4	5.5	0.11	12.2	0.3	2.1	2	0	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
zf-TFIIB	PF13453.1	gi|332797094|ref|YP_004458594.1|	-	1.3	8.2	3.4	13	5.0	0.7	2.7	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zinc_ribbon_2	PF13240.1	gi|332797094|ref|YP_004458594.1|	-	4.5	6.8	12.7	4.7	6.8	1.6	2.9	2	1	0	2	2	2	0	zinc-ribbon	domain
Alba	PF01918.16	gi|332797095|ref|YP_004458595.1|	-	3.4e-10	39.3	0.1	4.6e-10	38.9	0.1	1.2	1	1	0	1	1	1	1	Alba
LTD	PF00932.14	gi|332797095|ref|YP_004458595.1|	-	0.0011	19.0	0.1	0.0013	18.7	0.1	1.3	1	1	0	1	1	1	1	Lamin	Tail	Domain
DEAD	PF00270.24	gi|332797096|ref|YP_004458596.1|	-	1.3e-30	106.1	0.0	1e-29	103.1	0.0	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|332797096|ref|YP_004458596.1|	-	5.3e-18	65.4	0.0	2.8e-17	63.0	0.0	2.0	1	1	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|332797096|ref|YP_004458596.1|	-	4.2e-13	48.9	0.0	2.2e-12	46.6	0.0	2.3	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332797096|ref|YP_004458596.1|	-	1.1e-05	25.3	0.0	0.0001	22.2	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|332797096|ref|YP_004458596.1|	-	0.019	13.8	0.1	0.037	12.8	0.1	1.5	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
PhoH	PF02562.11	gi|332797096|ref|YP_004458596.1|	-	0.033	13.4	0.2	0.28	10.4	0.0	2.5	3	0	0	3	3	3	0	PhoH-like	protein
IL7	PF01415.11	gi|332797096|ref|YP_004458596.1|	-	0.088	12.4	0.0	0.22	11.1	0.0	1.6	1	0	0	1	1	1	0	Interleukin	7/9	family
HTH_Crp_2	PF13545.1	gi|332797096|ref|YP_004458596.1|	-	0.18	11.6	2.8	4.4	7.1	0.0	3.9	4	0	0	4	4	4	0	Crp-like	helix-turn-helix	domain
zf-H2C2_2	PF13465.1	gi|332797097|ref|YP_004458597.1|	-	0.68	10.3	3.6	0.78	10.1	0.2	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
RtcB	PF01139.12	gi|332797098|ref|YP_004458598.1|	-	1.1e-150	502.2	0.1	1.3e-150	502.1	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
DS	PF01916.12	gi|332797099|ref|YP_004458599.1|	-	1.4e-78	264.0	0.0	1.7e-78	263.7	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Topo-VIb_trans	PF09239.6	gi|332797100|ref|YP_004458600.1|	-	2.1e-68	228.8	0.3	4.6e-68	227.7	0.2	1.6	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c_3	PF13589.1	gi|332797100|ref|YP_004458600.1|	-	1e-11	44.6	0.0	3e-11	43.1	0.0	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|332797100|ref|YP_004458600.1|	-	9.1e-11	41.4	0.0	1.8e-10	40.4	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|332797100|ref|YP_004458600.1|	-	5.2e-06	25.2	0.1	5.2e-06	25.2	0.0	2.1	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S13	PF00416.17	gi|332797100|ref|YP_004458600.1|	-	0.0056	17.1	1.6	0.031	14.7	0.0	2.7	2	1	0	2	2	2	1	Ribosomal	protein	S13/S18
Hom_end	PF05204.9	gi|332797100|ref|YP_004458600.1|	-	0.02	14.8	0.1	0.04	13.8	0.0	1.5	1	0	0	1	1	1	0	Homing	endonuclease
H2TH	PF06831.9	gi|332797100|ref|YP_004458600.1|	-	0.075	12.7	0.1	0.26	11.0	0.0	2.0	2	0	0	2	2	2	0	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
TP6A_N	PF04406.9	gi|332797101|ref|YP_004458601.1|	-	7e-24	83.2	0.1	1.2e-23	82.4	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|332797101|ref|YP_004458601.1|	-	0.017	14.9	0.0	0.033	14.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
Cytochrom_B559a	PF00284.15	gi|332797101|ref|YP_004458601.1|	-	0.077	12.5	0.0	0.18	11.3	0.0	1.6	1	0	0	1	1	1	0	Lumenal	portion	of	Cytochrome	b559,	alpha	(gene	psbE)	subunit
HAD_2	PF13419.1	gi|332797101|ref|YP_004458601.1|	-	0.094	12.9	0.0	0.18	11.9	0.0	1.4	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
Elf1	PF05129.8	gi|332797102|ref|YP_004458602.1|	-	0.00054	19.6	0.5	0.00057	19.5	0.4	1.1	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
DUF3797	PF12677.2	gi|332797102|ref|YP_004458602.1|	-	0.029	14.0	5.3	0.62	9.7	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Terminase_GpA	PF05876.7	gi|332797102|ref|YP_004458602.1|	-	0.042	12.1	0.1	0.045	12.0	0.1	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
zf-DNL	PF05180.7	gi|332797102|ref|YP_004458602.1|	-	0.061	13.0	0.9	0.062	13.0	0.6	1.1	1	0	0	1	1	1	0	DNL	zinc	finger
DUF402	PF04167.8	gi|332797102|ref|YP_004458602.1|	-	0.067	13.0	0.0	0.068	13.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF402)
Lar_restr_allev	PF14354.1	gi|332797102|ref|YP_004458602.1|	-	0.082	13.2	1.6	1.3	9.4	1.1	2.0	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
KTSC	PF13619.1	gi|332797102|ref|YP_004458602.1|	-	0.14	11.8	0.0	0.16	11.6	0.0	1.1	1	0	0	1	1	1	0	KTSC	domain
zinc_ribbon_4	PF13717.1	gi|332797102|ref|YP_004458602.1|	-	0.33	10.6	3.2	0.37	10.5	0.1	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|332797102|ref|YP_004458602.1|	-	0.39	10.2	0.2	0.39	10.2	0.1	1.6	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332797102|ref|YP_004458602.1|	-	0.41	10.2	0.2	0.41	10.2	0.2	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|332797102|ref|YP_004458602.1|	-	0.46	10.1	3.9	6.4	6.4	0.1	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
GCC2_GCC3	PF07699.8	gi|332797102|ref|YP_004458602.1|	-	0.56	9.8	5.2	1.7	8.3	0.4	2.1	1	1	1	2	2	2	0	GCC2	and	GCC3
zf-RanBP	PF00641.13	gi|332797102|ref|YP_004458602.1|	-	0.65	9.1	4.0	1.3	8.2	0.2	2.1	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
Ribosomal_L44	PF00935.14	gi|332797102|ref|YP_004458602.1|	-	0.72	9.9	3.5	12	5.9	0.2	2.1	1	1	1	2	2	2	0	Ribosomal	protein	L44
zf-ribbon_3	PF13248.1	gi|332797102|ref|YP_004458602.1|	-	1.1	8.5	4.0	4.1	6.7	2.8	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|332797102|ref|YP_004458602.1|	-	2.2	7.8	5.5	23	4.5	3.8	2.0	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF2082	PF09855.4	gi|332797102|ref|YP_004458602.1|	-	2.2	8.1	6.1	0.47	10.3	0.5	1.9	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
eIF-5a	PF01287.15	gi|332797103|ref|YP_004458603.1|	-	5.3e-15	55.1	0.6	9.1e-15	54.3	0.4	1.4	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|332797103|ref|YP_004458603.1|	-	4.5e-07	29.6	0.0	1.1e-06	28.3	0.0	1.6	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
KOW	PF00467.24	gi|332797103|ref|YP_004458603.1|	-	0.0012	18.4	0.4	0.0045	16.6	0.3	2.1	1	0	0	1	1	1	1	KOW	motif
EFP	PF01132.15	gi|332797103|ref|YP_004458603.1|	-	0.016	14.8	0.1	0.032	13.8	0.1	1.6	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
MacB_PCD	PF12704.2	gi|332797103|ref|YP_004458603.1|	-	0.085	12.4	0.1	0.69	9.4	0.0	1.9	1	1	1	2	2	2	0	MacB-like	periplasmic	core	domain
SRP54	PF00448.17	gi|332797104|ref|YP_004458604.1|	-	1.2e-72	243.4	0.8	1.9e-72	242.8	0.6	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|332797104|ref|YP_004458604.1|	-	2.1e-32	111.4	2.3	1.1e-30	106.0	0.2	2.9	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|332797104|ref|YP_004458604.1|	-	1.8e-13	50.4	2.8	5.1e-13	48.9	0.3	2.9	2	0	0	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|332797104|ref|YP_004458604.1|	-	1.8e-06	27.5	0.6	1e-05	25.0	0.4	2.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|332797104|ref|YP_004458604.1|	-	1.1e-05	25.6	0.0	0.00011	22.3	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|332797104|ref|YP_004458604.1|	-	0.00096	18.8	1.8	0.002	17.8	0.5	2.1	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_31	PF13614.1	gi|332797104|ref|YP_004458604.1|	-	0.0023	17.9	0.0	0.19	11.6	0.0	3.1	2	1	1	3	3	3	1	AAA	domain
KAP_NTPase	PF07693.9	gi|332797104|ref|YP_004458604.1|	-	0.0031	16.5	0.0	0.006	15.6	0.0	1.4	1	0	0	1	1	1	1	KAP	family	P-loop	domain
AAA_33	PF13671.1	gi|332797104|ref|YP_004458604.1|	-	0.0035	17.2	0.0	0.0099	15.7	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
eIF3_subunit	PF08597.5	gi|332797104|ref|YP_004458604.1|	-	0.0058	16.2	0.1	0.011	15.3	0.1	1.4	1	0	0	1	1	1	1	Translation	initiation	factor	eIF3	subunit
AAA_17	PF13207.1	gi|332797104|ref|YP_004458604.1|	-	0.0078	17.0	2.2	0.024	15.4	0.5	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_30	PF13604.1	gi|332797104|ref|YP_004458604.1|	-	0.0097	15.5	0.5	0.031	13.8	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|332797104|ref|YP_004458604.1|	-	0.012	15.0	1.6	0.099	12.0	1.1	2.3	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
EcsC	PF12787.2	gi|332797104|ref|YP_004458604.1|	-	0.012	14.9	0.0	0.035	13.5	0.0	1.7	1	0	0	1	1	1	0	EcsC	protein	family
Zeta_toxin	PF06414.7	gi|332797104|ref|YP_004458604.1|	-	0.014	14.4	0.0	0.036	13.1	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
AAA_19	PF13245.1	gi|332797104|ref|YP_004458604.1|	-	0.019	14.6	0.2	0.053	13.2	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
ArgK	PF03308.11	gi|332797104|ref|YP_004458604.1|	-	0.027	13.2	1.0	0.19	10.4	0.1	2.3	2	0	0	2	2	2	0	ArgK	protein
AAA_5	PF07728.9	gi|332797104|ref|YP_004458604.1|	-	0.033	13.9	0.2	0.088	12.5	0.2	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
6PF2K	PF01591.13	gi|332797104|ref|YP_004458604.1|	-	0.037	13.0	0.0	0.12	11.4	0.0	1.8	2	0	0	2	2	2	0	6-phosphofructo-2-kinase
TPP_enzyme_M	PF00205.17	gi|332797104|ref|YP_004458604.1|	-	0.055	13.2	0.0	0.15	11.8	0.0	1.7	1	1	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	central	domain
AAA	PF00004.24	gi|332797104|ref|YP_004458604.1|	-	0.071	13.3	2.5	0.28	11.3	0.8	2.7	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|332797104|ref|YP_004458604.1|	-	0.078	12.9	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
LpxK	PF02606.9	gi|332797104|ref|YP_004458604.1|	-	0.2	10.5	1.1	0.5	9.2	0.5	1.7	2	0	0	2	2	2	0	Tetraacyldisaccharide-1-P	4'-kinase
AAA_25	PF13481.1	gi|332797104|ref|YP_004458604.1|	-	0.31	10.4	1.4	1.2	8.4	0.1	2.8	3	1	1	4	4	4	0	AAA	domain
AAA_18	PF13238.1	gi|332797104|ref|YP_004458604.1|	-	0.63	10.3	5.8	0.14	12.4	0.7	2.6	3	1	0	3	3	2	0	AAA	domain
THUMP	PF02926.12	gi|332797105|ref|YP_004458605.1|	-	0.0001	22.2	2.5	0.0001	22.2	1.8	2.5	3	0	0	3	3	3	1	THUMP	domain
NAD_binding_2	PF03446.10	gi|332797106|ref|YP_004458606.1|	-	3.2e-35	121.4	0.1	4.7e-35	120.8	0.1	1.3	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|332797106|ref|YP_004458606.1|	-	4.7e-27	94.4	0.0	7.7e-27	93.7	0.0	1.3	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|332797106|ref|YP_004458606.1|	-	2.5e-10	40.6	0.1	7.9e-10	39.0	0.0	1.9	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|332797106|ref|YP_004458606.1|	-	0.00088	19.7	0.0	0.0022	18.5	0.0	1.7	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
2-Hacid_dh_C	PF02826.14	gi|332797106|ref|YP_004458606.1|	-	0.00088	18.4	0.0	0.0015	17.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
PDH	PF02153.12	gi|332797106|ref|YP_004458606.1|	-	0.00093	18.1	0.1	0.0015	17.4	0.1	1.2	1	0	0	1	1	1	1	Prephenate	dehydrogenase
IlvN	PF07991.7	gi|332797106|ref|YP_004458606.1|	-	0.0027	17.0	0.1	0.0058	16.0	0.0	1.6	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Shikimate_DH	PF01488.15	gi|332797106|ref|YP_004458606.1|	-	0.0074	16.3	0.1	0.015	15.3	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
UBACT	PF02134.16	gi|332797106|ref|YP_004458606.1|	-	0.0083	15.6	0.1	2.4	7.8	0.0	2.6	2	0	0	2	2	2	1	Repeat	in	ubiquitin-activating	(UBA)	protein
OCD_Mu_crystall	PF02423.10	gi|332797106|ref|YP_004458606.1|	-	0.026	13.2	0.0	0.037	12.8	0.0	1.2	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
NAD_Gly3P_dh_N	PF01210.18	gi|332797106|ref|YP_004458606.1|	-	0.058	13.1	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Glycos_transf_1	PF00534.15	gi|332797107|ref|YP_004458607.1|	-	2.1e-23	82.5	0.4	3.2e-23	82.0	0.3	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|332797107|ref|YP_004458607.1|	-	2.2e-12	47.3	0.0	4.1e-12	46.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|332797107|ref|YP_004458607.1|	-	0.026	14.2	0.0	0.056	13.1	0.0	1.5	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
adh_short_C2	PF13561.1	gi|332797108|ref|YP_004458608.1|	-	6.9e-22	78.3	0.0	8.1e-22	78.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|332797108|ref|YP_004458608.1|	-	2.1e-17	63.5	0.0	3.2e-17	62.9	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|332797108|ref|YP_004458608.1|	-	3.3e-05	23.6	0.0	4.4e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|332797108|ref|YP_004458608.1|	-	0.0042	17.1	0.0	0.012	15.6	0.0	1.6	1	1	0	1	1	1	1	NADH(P)-binding
F420_oxidored	PF03807.12	gi|332797108|ref|YP_004458608.1|	-	0.069	13.5	0.1	0.16	12.4	0.0	1.6	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.13	gi|332797108|ref|YP_004458608.1|	-	0.07	12.7	0.0	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|332797108|ref|YP_004458608.1|	-	0.11	12.6	0.0	0.19	11.8	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Cren7	PF11520.3	gi|332797109|ref|YP_004458609.1|	-	1.3e-28	98.3	0.8	1.4e-28	98.2	0.5	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
DUF4585	PF15232.1	gi|332797109|ref|YP_004458609.1|	-	0.08	12.8	0.1	0.2	11.5	0.0	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4585)
Ribosomal_L34e	PF01199.13	gi|332797109|ref|YP_004458609.1|	-	0.14	12.3	0.1	0.14	12.3	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L34e
AA_kinase	PF00696.23	gi|332797110|ref|YP_004458610.1|	-	2.3e-33	115.7	0.2	2.8e-33	115.4	0.2	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
Peptidase_C25_C	PF03785.9	gi|332797110|ref|YP_004458610.1|	-	0.026	14.3	0.7	3	7.7	0.1	2.5	2	0	0	2	2	2	0	Peptidase	family	C25,	C	terminal	ig-like	domain
Tricorn_C1	PF14684.1	gi|332797111|ref|YP_004458611.1|	-	0.017	14.9	0.0	0.19	11.6	0.0	2.1	2	0	0	2	2	2	0	Tricorn	protease	C1	domain
RMMBL	PF07521.7	gi|332797111|ref|YP_004458611.1|	-	0.031	14.1	0.0	0.074	12.8	0.0	1.6	1	0	0	1	1	1	0	RNA-metabolising	metallo-beta-lactamase
DUF4047	PF13256.1	gi|332797111|ref|YP_004458611.1|	-	0.5	10.3	3.2	1.1	9.2	0.5	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4047)
HMGL-like	PF00682.14	gi|332797112|ref|YP_004458612.1|	-	1.1e-64	218.3	1.3	1.6e-64	217.8	0.9	1.2	1	0	0	1	1	1	1	HMGL-like
AsnC_trans_reg	PF01037.16	gi|332797112|ref|YP_004458612.1|	-	2.9e-15	55.7	0.5	2.1e-13	49.7	0.1	3.1	3	0	0	3	3	3	1	AsnC	family
AP_endonuc_2	PF01261.19	gi|332797112|ref|YP_004458612.1|	-	0.0003	20.1	0.7	0.00098	18.4	0.5	1.8	1	1	1	2	2	2	1	Xylose	isomerase-like	TIM	barrel
ACT_4	PF13291.1	gi|332797112|ref|YP_004458612.1|	-	0.0066	16.7	1.9	4.2	7.7	0.0	4.5	4	1	1	5	5	5	1	ACT	domain
Glyco_hydro_97	PF10566.4	gi|332797112|ref|YP_004458612.1|	-	0.066	12.3	0.1	0.099	11.7	0.0	1.2	1	0	0	1	1	1	0	Glycoside	hydrolase	97
Radical_SAM	PF04055.16	gi|332797112|ref|YP_004458612.1|	-	0.07	13.3	2.0	0.57	10.3	0.6	2.8	2	2	0	2	2	2	0	Radical	SAM	superfamily
DUF4312	PF14189.1	gi|332797113|ref|YP_004458613.1|	-	0.0064	16.3	0.2	0.029	14.2	0.0	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4312)
DUF4469	PF14734.1	gi|332797113|ref|YP_004458613.1|	-	0.051	13.4	0.1	0.1	12.4	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4469)	with	IG-like	fold
AF2331-like	PF14556.1	gi|332797113|ref|YP_004458613.1|	-	0.091	13.1	0.0	0.12	12.7	0.0	1.1	1	0	0	1	1	1	0	AF2331-like
PIN	PF01850.16	gi|332797115|ref|YP_004458615.1|	-	0.03	14.6	0.0	0.055	13.7	0.0	1.4	1	0	0	1	1	1	0	PIN	domain
Pox_A28	PF04584.9	gi|332797116|ref|YP_004458616.1|	-	0.1	12.4	0.3	0.14	12.0	0.2	1.2	1	0	0	1	1	1	0	Poxvirus	A28	family
Toxin_67	PF15545.1	gi|332797116|ref|YP_004458616.1|	-	0.12	12.2	0.0	0.17	11.7	0.0	1.2	1	0	0	1	1	1	0	Putative	toxin	67
PaREP1	PF05942.6	gi|332797119|ref|YP_004458619.1|	-	4.8e-17	61.8	0.0	6.6e-17	61.4	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Plasmid_stabil	PF05016.9	gi|332797120|ref|YP_004458620.1|	-	0.0001	22.6	0.1	0.00014	22.1	0.1	1.2	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
DSS1_SEM1	PF05160.8	gi|332797121|ref|YP_004458621.1|	-	0.088	12.5	1.9	0.099	12.4	1.3	1.2	1	0	0	1	1	1	0	DSS1/SEM1	family
DUF1292	PF06949.6	gi|332797121|ref|YP_004458621.1|	-	0.17	12.2	0.9	0.19	12.1	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1292)
DUF3753	PF12575.3	gi|332797121|ref|YP_004458621.1|	-	0.19	11.5	0.7	0.28	11.0	0.2	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3753)
DrsE	PF02635.10	gi|332797123|ref|YP_004458623.1|	-	7e-12	45.4	0.0	7.9e-12	45.3	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DsrH	PF04077.7	gi|332797123|ref|YP_004458623.1|	-	0.061	13.0	0.0	0.068	12.8	0.0	1.2	1	0	0	1	1	1	0	DsrH	like	protein
SKI	PF01202.17	gi|332797123|ref|YP_004458623.1|	-	0.11	12.3	0.0	0.45	10.3	0.0	1.7	1	1	1	2	2	2	0	Shikimate	kinase
Sugar_tr	PF00083.19	gi|332797124|ref|YP_004458624.1|	-	6.9e-53	179.8	20.6	8.2e-53	179.5	14.3	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332797124|ref|YP_004458624.1|	-	1.2e-20	73.5	57.4	4.1e-19	68.5	21.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1129	PF06570.6	gi|332797124|ref|YP_004458624.1|	-	1.6	8.0	11.2	0.26	10.5	0.8	3.5	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1129)
Arch_ATPase	PF01637.13	gi|332797125|ref|YP_004458625.1|	-	2.6e-38	132.0	6.0	2.6e-38	132.0	4.2	1.8	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|332797125|ref|YP_004458625.1|	-	2.6e-13	49.9	2.2	1.2e-10	41.4	0.2	3.5	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|332797125|ref|YP_004458625.1|	-	1.8e-07	31.3	0.1	4.6e-07	30.0	0.1	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|332797125|ref|YP_004458625.1|	-	7.2e-05	22.8	0.1	0.00069	19.6	0.0	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_35	PF14516.1	gi|332797125|ref|YP_004458625.1|	-	0.00026	19.7	0.3	0.0026	16.4	0.2	2.3	1	1	0	1	1	1	1	AAA-like	domain
AAA	PF00004.24	gi|332797125|ref|YP_004458625.1|	-	0.0029	17.8	0.1	0.021	15.0	0.0	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP120	PF08623.5	gi|332797126|ref|YP_004458626.1|	-	0.0013	18.3	0.3	0.0013	18.3	0.2	1.0	1	0	0	1	1	1	1	TATA-binding	protein	interacting	(TIP20)
KID	PF02524.9	gi|332797126|ref|YP_004458626.1|	-	0.0022	17.7	1.4	0.57	10.5	0.2	3.0	1	1	1	2	2	2	2	KID	repeat
DNA_pol3_a_NII	PF11490.3	gi|332797126|ref|YP_004458626.1|	-	0.03	13.9	0.4	0.034	13.7	0.3	1.1	1	0	0	1	1	1	0	DNA	polymerase	III	polC-type	N-terminus	II
Phasin	PF05597.6	gi|332797126|ref|YP_004458626.1|	-	0.11	12.2	0.4	0.21	11.3	0.2	1.5	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Methyltransf_25	PF13649.1	gi|332797127|ref|YP_004458627.1|	-	8.7e-10	38.8	0.0	1.2e-09	38.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332797127|ref|YP_004458627.1|	-	3.5e-07	29.9	0.0	4.2e-07	29.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332797127|ref|YP_004458627.1|	-	8.8e-05	23.0	0.0	0.00018	22.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332797127|ref|YP_004458627.1|	-	0.0039	17.6	0.0	0.011	16.1	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|332797127|ref|YP_004458627.1|	-	0.028	13.7	0.0	0.04	13.3	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_16	PF10294.4	gi|332797127|ref|YP_004458627.1|	-	0.03	13.7	0.0	0.047	13.1	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
NmrA	PF05368.8	gi|332797127|ref|YP_004458627.1|	-	0.091	11.9	0.0	0.13	11.5	0.0	1.2	1	0	0	1	1	1	0	NmrA-like	family
Ubie_methyltran	PF01209.13	gi|332797127|ref|YP_004458627.1|	-	0.11	11.6	0.0	0.14	11.2	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Acylphosphatase	PF00708.13	gi|332797128|ref|YP_004458628.1|	-	0.011	15.8	0.1	0.021	14.9	0.0	1.6	2	0	0	2	2	2	0	Acylphosphatase
VHS	PF00790.14	gi|332797128|ref|YP_004458628.1|	-	0.033	13.8	0.0	0.063	12.9	0.0	1.4	1	1	0	1	1	1	0	VHS	domain
Arch_fla_DE	PF04659.8	gi|332797128|ref|YP_004458628.1|	-	0.055	13.2	0.1	0.11	12.2	0.1	1.6	1	1	0	1	1	1	0	Archaeal	flagella	protein
DUF1887	PF09002.6	gi|332797129|ref|YP_004458629.1|	-	0.0047	15.3	0.7	0.0073	14.7	0.1	1.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1887)
PIN_4	PF13638.1	gi|332797129|ref|YP_004458629.1|	-	0.049	13.7	0.0	0.13	12.3	0.0	1.8	2	1	0	2	2	2	0	PIN	domain
CTV_P13	PF06922.6	gi|332797130|ref|YP_004458630.1|	-	0.051	13.4	0.2	0.086	12.7	0.1	1.4	1	0	0	1	1	1	0	Citrus	tristeza	virus	P13	protein
Lactamase_B	PF00753.22	gi|332797131|ref|YP_004458631.1|	-	5.2e-16	58.8	0.2	6.8e-16	58.4	0.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332797131|ref|YP_004458631.1|	-	6.5e-05	22.5	0.2	9.2e-05	22.0	0.2	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PPV_E1_N	PF00524.13	gi|332797132|ref|YP_004458632.1|	-	0.014	15.6	0.6	0.025	14.8	0.4	1.4	1	0	0	1	1	1	0	E1	Protein,	N	terminal	domain
PS_pyruv_trans	PF04230.8	gi|332797132|ref|YP_004458632.1|	-	0.019	14.6	0.3	0.034	13.8	0.2	1.3	1	0	0	1	1	1	0	Polysaccharide	pyruvyl	transferase
DUF3533	PF12051.3	gi|332797132|ref|YP_004458632.1|	-	0.024	13.3	0.0	0.032	13.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3533)
Lipase_GDSL_3	PF14606.1	gi|332797132|ref|YP_004458632.1|	-	0.04	13.6	0.1	6.9	6.3	0.0	2.4	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
DUF3211	PF11485.3	gi|332797132|ref|YP_004458632.1|	-	0.058	13.4	6.2	0.038	14.0	2.3	2.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3211)
Pex19	PF04614.7	gi|332797132|ref|YP_004458632.1|	-	0.06	12.9	0.3	0.21	11.1	0.2	1.7	1	1	1	2	2	2	0	Pex19	protein	family
SGL	PF08450.7	gi|332797134|ref|YP_004458634.1|	-	1.3e-07	31.2	0.1	0.026	13.9	0.0	3.6	1	1	3	4	4	4	3	SMP-30/Gluconolaconase/LRE-like	region
PQQ	PF01011.16	gi|332797134|ref|YP_004458634.1|	-	0.0012	18.2	5.8	0.7	9.5	0.5	4.5	4	1	0	4	4	4	2	PQQ	enzyme	repeat
NHL	PF01436.16	gi|332797134|ref|YP_004458634.1|	-	0.028	14.3	10.4	12	6.0	0.1	5.8	7	1	1	8	8	8	0	NHL	repeat
PQQ_3	PF13570.1	gi|332797134|ref|YP_004458634.1|	-	0.13	12.5	13.6	1.7	8.9	0.1	5.6	4	1	0	4	4	4	0	PQQ-like	domain
EamA	PF00892.15	gi|332797135|ref|YP_004458635.1|	-	1.4e-15	57.4	34.1	4.4e-10	39.6	9.4	2.7	2	2	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|332797135|ref|YP_004458635.1|	-	0.4	10.8	20.3	1.9	8.7	3.8	3.1	2	2	0	2	2	2	0	Multidrug	resistance	efflux	transporter
HTH_24	PF13412.1	gi|332797136|ref|YP_004458636.1|	-	1.7e-06	27.2	0.4	1.7e-06	27.2	0.3	1.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HxlR	PF01638.12	gi|332797136|ref|YP_004458636.1|	-	2e-05	24.1	0.3	5.4e-05	22.7	0.2	1.6	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_DeoR	PF08220.7	gi|332797136|ref|YP_004458636.1|	-	0.0002	20.8	0.1	0.0003	20.2	0.0	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_45	PF14947.1	gi|332797136|ref|YP_004458636.1|	-	0.00038	20.2	0.7	0.00051	19.8	0.5	1.3	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|332797136|ref|YP_004458636.1|	-	0.0012	18.8	0.1	0.0016	18.4	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
FeoC	PF09012.5	gi|332797136|ref|YP_004458636.1|	-	0.0031	17.1	0.0	0.0039	16.8	0.0	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_9	PF08221.6	gi|332797136|ref|YP_004458636.1|	-	0.0039	17.0	0.2	0.0091	15.8	0.1	1.6	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Rrf2	PF02082.15	gi|332797136|ref|YP_004458636.1|	-	0.0044	17.1	0.0	0.0053	16.8	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_5	PF01022.15	gi|332797136|ref|YP_004458636.1|	-	0.0052	16.4	0.1	0.0073	15.9	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF977	PF06163.6	gi|332797136|ref|YP_004458636.1|	-	0.013	15.2	0.0	0.015	14.9	0.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
PCI	PF01399.22	gi|332797136|ref|YP_004458636.1|	-	0.025	14.9	0.1	0.031	14.6	0.1	1.2	1	0	0	1	1	1	0	PCI	domain
HemN_C	PF06969.11	gi|332797136|ref|YP_004458636.1|	-	0.028	14.4	0.0	0.034	14.2	0.0	1.1	1	0	0	1	1	1	0	HemN	C-terminal	domain
TrmB	PF01978.14	gi|332797136|ref|YP_004458636.1|	-	0.044	13.4	0.1	0.056	13.1	0.0	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|332797136|ref|YP_004458636.1|	-	0.044	13.4	0.1	0.075	12.6	0.1	1.3	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.2	gi|332797136|ref|YP_004458636.1|	-	0.055	13.2	0.0	0.076	12.8	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|332797136|ref|YP_004458636.1|	-	0.056	13.0	0.4	0.32	10.5	0.0	2.2	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
DUF505	PF04458.7	gi|332797136|ref|YP_004458636.1|	-	0.075	11.1	0.2	0.078	11.0	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
TFIIE_alpha	PF02002.12	gi|332797136|ref|YP_004458636.1|	-	0.088	12.3	0.4	0.1	12.0	0.3	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HHH_5	PF14520.1	gi|332797136|ref|YP_004458636.1|	-	0.28	11.3	1.6	0.54	10.4	1.1	1.6	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
CbiA	PF01656.18	gi|332797137|ref|YP_004458637.1|	-	0.0008	18.8	0.4	0.0014	18.0	0.3	1.8	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_17	PF13207.1	gi|332797137|ref|YP_004458637.1|	-	0.011	16.5	0.6	0.028	15.2	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
Recep_L_domain	PF01030.19	gi|332797137|ref|YP_004458637.1|	-	0.013	15.4	0.1	0.031	14.2	0.0	1.6	2	0	0	2	2	2	0	Receptor	L	domain
AAA_21	PF13304.1	gi|332797137|ref|YP_004458637.1|	-	0.022	14.7	3.0	0.027	14.4	2.1	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|332797137|ref|YP_004458637.1|	-	0.039	14.2	0.0	0.054	13.8	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
ArsA_ATPase	PF02374.10	gi|332797137|ref|YP_004458637.1|	-	0.88	8.5	2.9	5	6.0	0.3	2.1	1	1	0	2	2	2	0	Anion-transporting	ATPase
Hexapep	PF00132.19	gi|332797139|ref|YP_004458639.1|	-	8.6e-16	56.6	8.9	3.4e-08	32.6	0.3	5.0	2	1	3	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transferase	PF00483.18	gi|332797139|ref|YP_004458639.1|	-	3.7e-15	55.9	0.2	6e-14	51.9	0.0	2.1	1	1	1	2	2	2	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|332797139|ref|YP_004458639.1|	-	1.8e-10	41.1	0.0	2.8e-10	40.5	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|332797139|ref|YP_004458639.1|	-	0.00063	19.3	0.0	0.00091	18.7	0.0	1.4	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Hexapep_2	PF14602.1	gi|332797139|ref|YP_004458639.1|	-	0.0011	18.4	0.5	8.6	6.0	0.2	3.7	2	1	0	3	3	3	1	Hexapeptide	repeat	of	succinyl-transferase
Fucokinase	PF07959.7	gi|332797139|ref|YP_004458639.1|	-	0.048	12.2	0.3	0.28	9.6	0.0	2.0	1	1	1	2	2	2	0	L-fucokinase
SIS	PF01380.17	gi|332797140|ref|YP_004458640.1|	-	3.1e-44	149.7	1.9	3.2e-25	88.2	0.6	2.6	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|332797140|ref|YP_004458640.1|	-	3e-23	82.2	0.0	8e-23	80.8	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|332797140|ref|YP_004458640.1|	-	2.5e-21	75.8	0.5	1.5e-14	53.5	0.1	2.3	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|332797140|ref|YP_004458640.1|	-	1.9e-18	66.4	0.1	1.5e-17	63.4	0.0	2.4	3	0	0	3	3	3	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|332797140|ref|YP_004458640.1|	-	3.9e-06	25.7	0.0	6.6e-06	24.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|332797140|ref|YP_004458640.1|	-	0.00022	20.9	0.1	0.0013	18.4	0.0	2.4	2	1	0	2	2	2	1	SIS	domain
GHMP_kinases_N	PF00288.21	gi|332797141|ref|YP_004458641.1|	-	1.6e-09	37.6	0.0	4.7e-09	36.1	0.0	1.9	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|332797141|ref|YP_004458641.1|	-	1.2e-08	35.0	0.2	2.9e-08	33.8	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
tRNA-Thr_ED	PF08915.6	gi|332797142|ref|YP_004458642.1|	-	6.5e-53	178.3	0.3	1e-52	177.7	0.2	1.3	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|332797142|ref|YP_004458642.1|	-	1.7e-20	72.7	0.7	1.6e-19	69.5	0.3	2.6	3	0	0	3	3	3	1	Anticodon	binding	domain
KaiC	PF06745.8	gi|332797142|ref|YP_004458642.1|	-	0.087	11.9	1.0	0.35	9.9	0.1	2.2	2	1	0	2	2	2	0	KaiC
RNA_pol_L_2	PF13656.1	gi|332797142|ref|YP_004458642.1|	-	0.11	11.9	0.2	2.8	7.4	0.1	2.8	3	0	0	3	3	3	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
DUF2262	PF10020.4	gi|332797142|ref|YP_004458642.1|	-	3.6	7.7	8.8	49	4.1	4.8	3.0	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2262)
Beta-Casp	PF10996.3	gi|332797143|ref|YP_004458643.1|	-	1.7e-26	92.5	0.0	3.6e-26	91.5	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|332797143|ref|YP_004458643.1|	-	3e-15	56.3	0.0	4.8e-15	55.7	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332797143|ref|YP_004458643.1|	-	1.9e-11	43.9	0.0	6e-11	42.2	0.0	1.7	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|332797143|ref|YP_004458643.1|	-	8.3e-09	35.1	0.0	1.8e-08	34.0	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|332797143|ref|YP_004458643.1|	-	0.00012	21.8	0.0	0.00029	20.6	0.0	1.6	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PDEase_II	PF02112.10	gi|332797143|ref|YP_004458643.1|	-	0.0022	16.9	0.0	0.0038	16.1	0.0	1.3	1	0	0	1	1	1	1	cAMP	phosphodiesterases	class-II
Antibiotic_NAT	PF02522.9	gi|332797143|ref|YP_004458643.1|	-	0.0037	16.5	0.0	1.1	8.4	0.0	2.4	2	0	0	2	2	2	2	Aminoglycoside	3-N-acetyltransferase
CheB_methylest	PF01339.12	gi|332797143|ref|YP_004458643.1|	-	0.07	12.5	0.1	0.15	11.5	0.1	1.5	1	0	0	1	1	1	0	CheB	methylesterase
UBA	PF00627.26	gi|332797144|ref|YP_004458644.1|	-	1.9e-06	27.5	0.1	2e-05	24.2	0.0	2.1	2	0	0	2	2	2	1	UBA/TS-N	domain
NAC	PF01849.13	gi|332797144|ref|YP_004458644.1|	-	1.9e-06	27.2	0.3	1.9e-06	27.2	0.2	2.1	2	1	1	3	3	3	1	NAC	domain
RAG2	PF03089.9	gi|332797144|ref|YP_004458644.1|	-	0.0069	15.1	0.1	0.0074	15.0	0.0	1.0	1	0	0	1	1	1	1	Recombination	activating	protein	2
Gp_dh_N	PF00044.19	gi|332797144|ref|YP_004458644.1|	-	0.017	15.0	0.2	0.018	14.9	0.1	1.2	1	0	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Casc1	PF12366.3	gi|332797144|ref|YP_004458644.1|	-	0.13	11.7	1.0	4	6.8	0.0	2.0	1	1	1	2	2	2	0	Cancer	susceptibility	candidate	1
HTH_3	PF01381.17	gi|332797145|ref|YP_004458645.1|	-	8.5e-12	44.7	0.0	1.6e-11	43.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|332797145|ref|YP_004458645.1|	-	4e-08	33.1	0.0	9.2e-08	32.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|332797145|ref|YP_004458645.1|	-	4.5e-07	29.9	0.0	7.7e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|332797145|ref|YP_004458645.1|	-	0.017	14.4	0.0	0.042	13.2	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_37	PF13744.1	gi|332797145|ref|YP_004458645.1|	-	0.018	14.7	0.0	0.035	13.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
RLAN	PF14401.1	gi|332797146|ref|YP_004458646.1|	-	0.078	12.4	0.5	0.1	12.0	0.4	1.3	1	0	0	1	1	1	0	RimK-like	ATPgrasp	N-terminal	domain
PALP	PF00291.20	gi|332797147|ref|YP_004458647.1|	-	2.5e-56	191.1	0.0	3e-56	190.9	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DFP	PF04127.10	gi|332797147|ref|YP_004458647.1|	-	0.16	11.5	0.3	0.28	10.7	0.2	1.3	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
Ammonium_transp	PF00909.16	gi|332797148|ref|YP_004458648.1|	-	3.1e-94	315.6	25.6	3.8e-94	315.4	17.7	1.1	1	0	0	1	1	1	1	Ammonium	Transporter	Family
PsiE	PF06146.7	gi|332797149|ref|YP_004458649.1|	-	5.2e-06	26.5	3.4	5.2e-06	26.5	2.4	2.1	1	1	1	2	2	2	1	Phosphate-starvation-inducible	E
Amidinotransf	PF02274.12	gi|332797150|ref|YP_004458650.1|	-	1.8e-42	145.3	0.1	2.8e-42	144.7	0.1	1.3	1	0	0	1	1	1	1	Amidinotransferase
FCH	PF00611.18	gi|332797150|ref|YP_004458650.1|	-	0.0075	16.4	2.3	0.022	14.9	1.6	1.7	1	0	0	1	1	1	1	Fes/CIP4,	and	EFC/F-BAR	homology	domain
ARL2_Bind_BART	PF11527.3	gi|332797150|ref|YP_004458650.1|	-	0.11	12.3	1.2	5.3	6.8	0.0	2.7	3	0	0	3	3	3	0	The	ARF-like	2	binding	protein	BART
Ins_allergen_rp	PF06757.8	gi|332797150|ref|YP_004458650.1|	-	0.14	11.5	1.8	2.6	7.4	0.2	2.7	2	1	1	3	3	3	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
UPF0180	PF03698.8	gi|332797150|ref|YP_004458650.1|	-	1.9	8.3	4.1	32	4.4	0.0	3.5	4	0	0	4	4	4	0	Uncharacterised	protein	family	(UPF0180)
CbiA	PF01656.18	gi|332797151|ref|YP_004458651.1|	-	7.7e-08	31.9	0.5	1.1e-07	31.5	0.3	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|332797151|ref|YP_004458651.1|	-	0.0011	18.9	0.0	0.0026	17.7	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
MipZ	PF09140.6	gi|332797151|ref|YP_004458651.1|	-	0.0048	16.0	0.0	0.0094	15.0	0.0	1.5	1	1	1	2	2	2	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|332797151|ref|YP_004458651.1|	-	0.034	13.1	0.4	0.094	11.7	0.0	1.8	2	0	0	2	2	2	0	Anion-transporting	ATPase
MMPL	PF03176.10	gi|332797153|ref|YP_004458653.1|	-	5e-63	212.8	16.2	1.2e-35	122.7	1.7	2.3	2	0	0	2	2	2	2	MMPL	family
Glycos_transf_1	PF00534.15	gi|332797154|ref|YP_004458654.1|	-	1.7e-31	108.9	0.1	3.1e-31	108.1	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|332797154|ref|YP_004458654.1|	-	7.2e-13	48.8	0.0	1.7e-12	47.6	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|332797154|ref|YP_004458654.1|	-	0.00011	22.3	0.0	0.0004	20.6	0.0	1.9	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.16	gi|332797154|ref|YP_004458654.1|	-	0.00077	18.0	1.1	0.86	8.0	0.1	3.0	2	1	1	3	3	3	3	Glycosyltransferase	family	20
ThiF	PF00899.16	gi|332797154|ref|YP_004458654.1|	-	0.051	13.3	0.8	7.4	6.3	0.2	2.4	1	1	1	2	2	2	0	ThiF	family
Usp	PF00582.21	gi|332797156|ref|YP_004458656.1|	-	5.2e-39	133.6	0.8	5.8e-39	133.4	0.6	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
AP_endonuc_2	PF01261.19	gi|332797156|ref|YP_004458656.1|	-	0.002	17.4	0.0	0.0031	16.8	0.0	1.3	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
F_bP_aldolase	PF01116.15	gi|332797156|ref|YP_004458656.1|	-	0.06	12.4	0.0	0.19	10.8	0.0	1.7	1	1	1	2	2	2	0	Fructose-bisphosphate	aldolase	class-II
QueC	PF06508.8	gi|332797158|ref|YP_004458658.1|	-	2.1e-60	203.6	0.0	3.1e-60	203.0	0.0	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
GATase_7	PF13537.1	gi|332797158|ref|YP_004458658.1|	-	2.6e-14	53.0	0.0	4.5e-14	52.2	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|332797158|ref|YP_004458658.1|	-	1.4e-12	47.7	0.0	2.6e-12	46.8	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
ThiI	PF02568.9	gi|332797158|ref|YP_004458658.1|	-	4.3e-10	39.3	0.0	1.8e-09	37.3	0.0	2.1	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|332797158|ref|YP_004458658.1|	-	9.5e-06	24.3	0.0	4.4e-05	22.2	0.0	2.1	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|332797158|ref|YP_004458658.1|	-	0.00011	21.7	0.0	0.00018	21.1	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
GATase_2	PF00310.16	gi|332797158|ref|YP_004458658.1|	-	0.00012	20.9	0.0	0.55	8.8	0.0	2.8	1	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
ATP_bind_3	PF01171.15	gi|332797158|ref|YP_004458658.1|	-	0.00073	19.0	0.0	0.0014	18.1	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
DUF3700	PF12481.3	gi|332797158|ref|YP_004458658.1|	-	0.011	14.9	0.0	0.026	13.7	0.0	1.4	1	1	0	1	1	1	0	Aluminium	induced	protein
NAD_synthase	PF02540.12	gi|332797158|ref|YP_004458658.1|	-	0.049	12.5	0.0	0.47	9.3	0.0	2.1	2	0	0	2	2	2	0	NAD	synthase
Glyco_transf_4	PF13439.1	gi|332797158|ref|YP_004458658.1|	-	0.067	12.9	0.0	0.4	10.3	0.0	2.2	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
YjeF_N	PF03853.10	gi|332797158|ref|YP_004458658.1|	-	0.13	11.8	0.0	0.23	11.0	0.0	1.3	1	0	0	1	1	1	0	YjeF-related	protein	N-terminus
Thioredoxin_6	PF13848.1	gi|332797158|ref|YP_004458658.1|	-	0.28	10.9	3.7	6.3	6.5	0.0	3.0	3	1	0	3	3	3	0	Thioredoxin-like	domain
DUF3502	PF12010.3	gi|332797159|ref|YP_004458659.1|	-	0.043	13.7	0.3	0.049	13.5	0.2	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3502)
NTP_transferase	PF00483.18	gi|332797160|ref|YP_004458660.1|	-	3e-30	105.3	0.0	3.6e-30	105.0	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|332797160|ref|YP_004458660.1|	-	2e-08	34.4	0.0	2.6e-08	34.1	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|332797160|ref|YP_004458660.1|	-	0.00018	21.1	0.0	0.00027	20.5	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DNA_binding_1	PF01035.15	gi|332797161|ref|YP_004458661.1|	-	2.4e-26	91.2	0.0	3e-26	90.9	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|332797161|ref|YP_004458661.1|	-	0.0021	17.4	0.0	0.0034	16.7	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
Methyltransf_1N	PF02870.10	gi|332797161|ref|YP_004458661.1|	-	0.021	15.4	0.0	0.15	12.6	0.0	2.1	1	1	0	1	1	1	0	6-O-methylguanine	DNA	methyltransferase,	ribonuclease-like	domain
HTH_23	PF13384.1	gi|332797161|ref|YP_004458661.1|	-	0.022	14.3	0.0	0.035	13.7	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|332797161|ref|YP_004458661.1|	-	0.078	12.5	0.0	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|332797161|ref|YP_004458661.1|	-	0.094	12.7	0.0	0.16	12.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
tRNA-synt_2b	PF00587.20	gi|332797162|ref|YP_004458662.1|	-	1.7e-40	138.4	0.1	2.8e-40	137.6	0.1	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|332797162|ref|YP_004458662.1|	-	1.4e-17	63.4	0.8	1.4e-17	63.4	0.6	2.5	3	0	0	3	3	3	1	Anticodon	binding	domain
Glyco_trans_1_3	PF13528.1	gi|332797163|ref|YP_004458663.1|	-	1.3e-11	44.2	0.0	1.9e-10	40.4	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.11	gi|332797163|ref|YP_004458663.1|	-	5e-09	36.0	0.1	1.7e-08	34.2	0.0	1.9	2	1	0	2	2	2	1	Glycosyltransferase	family	28	C-terminal	domain
Alg14	PF08660.6	gi|332797163|ref|YP_004458663.1|	-	4.3e-06	26.8	0.8	1.2e-05	25.3	0.1	2.1	2	0	0	2	2	2	1	Oligosaccharide	biosynthesis	protein	Alg14	like
DUF2117	PF09890.4	gi|332797163|ref|YP_004458663.1|	-	0.0013	17.9	0.0	0.0021	17.2	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
HhH-GPD	PF00730.20	gi|332797164|ref|YP_004458664.1|	-	4.1e-11	43.1	0.1	5.1e-11	42.8	0.0	1.1	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH_5	PF14520.1	gi|332797164|ref|YP_004458664.1|	-	0.00047	20.2	0.1	0.0021	18.1	0.1	2.1	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.18	gi|332797164|ref|YP_004458664.1|	-	0.0017	17.9	0.0	0.0038	16.8	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DDE_Tnp_1_assoc	PF13808.1	gi|332797164|ref|YP_004458664.1|	-	0.059	13.0	0.0	2.9	7.6	0.0	2.3	2	0	0	2	2	2	0	DDE_Tnp_1-associated
HHH_2	PF12826.2	gi|332797164|ref|YP_004458664.1|	-	0.066	13.0	0.1	0.2	11.5	0.0	1.8	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
EndIII_4Fe-2S	PF10576.4	gi|332797164|ref|YP_004458664.1|	-	0.78	10.0	5.1	1.4	9.2	3.5	1.3	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
ATP-grasp_2	PF08442.5	gi|332797165|ref|YP_004458665.1|	-	2.1e-31	108.8	1.9	4.3e-30	104.6	1.3	2.5	1	1	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|332797165|ref|YP_004458665.1|	-	8.1e-16	57.9	0.0	1.4e-15	57.2	0.0	1.4	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|332797165|ref|YP_004458665.1|	-	0.00015	21.0	0.0	0.018	14.2	0.0	3.0	2	1	0	2	2	2	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|332797165|ref|YP_004458665.1|	-	0.1	11.9	0.0	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
CoA_binding	PF02629.14	gi|332797166|ref|YP_004458666.1|	-	1.5e-22	79.9	7.6	4.3e-22	78.4	0.5	2.6	2	1	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|332797166|ref|YP_004458666.1|	-	2.4e-13	49.9	1.6	3.8e-13	49.2	1.1	1.3	1	0	0	1	1	1	1	CoA-ligase
CoA_binding_2	PF13380.1	gi|332797166|ref|YP_004458666.1|	-	2.9e-11	43.5	0.4	2.7e-10	40.4	0.1	2.3	2	1	0	2	2	2	1	CoA	binding	domain
Succ_CoA_lig	PF13607.1	gi|332797166|ref|YP_004458666.1|	-	4.9e-07	29.4	0.0	7.8e-07	28.7	0.0	1.3	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
GFO_IDH_MocA	PF01408.17	gi|332797166|ref|YP_004458666.1|	-	0.0003	21.2	0.1	0.0012	19.3	0.0	1.8	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Radical_SAM	PF04055.16	gi|332797166|ref|YP_004458666.1|	-	0.017	15.3	0.1	0.037	14.2	0.1	1.6	1	0	0	1	1	1	0	Radical	SAM	superfamily
PNP_UDP_1	PF01048.15	gi|332797169|ref|YP_004458669.1|	-	6.2e-39	133.3	0.0	7.4e-39	133.1	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
HD	PF01966.17	gi|332797170|ref|YP_004458670.1|	-	1e-10	41.6	0.1	3e-10	40.1	0.1	1.8	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|332797170|ref|YP_004458670.1|	-	0.0054	16.0	0.0	0.0095	15.2	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
Tup_N	PF08581.5	gi|332797170|ref|YP_004458670.1|	-	0.3	11.3	3.7	15	5.8	0.2	2.6	2	0	0	2	2	2	0	Tup	N-terminal
GHMP_kinases_N	PF00288.21	gi|332797171|ref|YP_004458671.1|	-	2.1e-10	40.5	1.5	4.1e-10	39.5	1.1	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
DUF2660	PF10859.3	gi|332797171|ref|YP_004458671.1|	-	0.086	13.0	0.0	0.27	11.4	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2660)
GHMP_kinases_N	PF00288.21	gi|332797172|ref|YP_004458672.1|	-	5.7e-13	48.7	0.0	1.7e-12	47.2	0.0	1.8	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|332797172|ref|YP_004458672.1|	-	5.3e-07	29.7	0.1	1.2e-06	28.5	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
Nup84_Nup100	PF04121.8	gi|332797173|ref|YP_004458673.1|	-	0.012	13.3	3.0	0.014	13.1	2.1	1.0	1	0	0	1	1	1	0	Nuclear	pore	protein	84	/	107
Pet20	PF08692.5	gi|332797173|ref|YP_004458673.1|	-	0.029	14.3	0.2	0.064	13.1	0.1	1.8	1	1	0	1	1	1	0	Mitochondrial	protein	Pet20
CENP-O	PF09496.5	gi|332797173|ref|YP_004458673.1|	-	0.15	12.3	0.6	0.67	10.2	0.0	2.1	1	1	0	2	2	2	0	Cenp-O	kinetochore	centromere	component
DED	PF01335.16	gi|332797173|ref|YP_004458673.1|	-	0.4	10.8	5.4	2.4	8.3	0.1	2.6	3	0	0	3	3	3	0	Death	effector	domain
HTH_45	PF14947.1	gi|332797174|ref|YP_004458674.1|	-	1.2e-22	79.5	4.6	1.5e-22	79.1	3.2	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HemN_C	PF06969.11	gi|332797174|ref|YP_004458674.1|	-	0.0051	16.8	0.0	0.0089	16.0	0.0	1.4	1	0	0	1	1	1	1	HemN	C-terminal	domain
Rrf2	PF02082.15	gi|332797174|ref|YP_004458674.1|	-	0.029	14.4	0.1	0.039	14.0	0.0	1.4	1	1	0	1	1	1	0	Transcriptional	regulator
DUF4364	PF14277.1	gi|332797174|ref|YP_004458674.1|	-	0.03	13.9	0.2	0.036	13.6	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
DUF2250	PF10007.4	gi|332797174|ref|YP_004458674.1|	-	0.03	14.2	0.8	0.11	12.4	0.5	1.8	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|332797174|ref|YP_004458674.1|	-	0.033	13.6	0.8	0.035	13.5	0.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
Mrr_N	PF14338.1	gi|332797174|ref|YP_004458674.1|	-	0.048	13.7	0.1	0.17	11.9	0.0	1.8	1	1	1	2	2	2	0	Mrr	N-terminal	domain
HTH_24	PF13412.1	gi|332797174|ref|YP_004458674.1|	-	0.069	12.5	0.3	0.17	11.3	0.0	1.8	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DASH_Duo1	PF08651.5	gi|332797174|ref|YP_004458674.1|	-	0.41	10.2	3.3	0.44	10.1	0.0	2.1	2	0	0	2	2	2	0	DASH	complex	subunit	Duo1
TrmB	PF01978.14	gi|332797176|ref|YP_004458676.1|	-	3.2e-09	36.3	0.0	4.6e-09	35.8	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|332797176|ref|YP_004458676.1|	-	1.8e-05	24.3	0.1	3.1e-05	23.6	0.1	1.4	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|332797176|ref|YP_004458676.1|	-	9.1e-05	22.3	0.0	0.00031	20.6	0.0	1.8	2	1	1	3	3	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|332797176|ref|YP_004458676.1|	-	0.00028	20.4	0.0	0.00047	19.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|332797176|ref|YP_004458676.1|	-	0.00057	19.2	0.0	0.001	18.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF387	PF04079.11	gi|332797176|ref|YP_004458676.1|	-	0.00066	19.0	0.0	0.00097	18.5	0.0	1.3	1	1	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
PaaX	PF07848.7	gi|332797176|ref|YP_004458676.1|	-	0.00084	19.2	0.0	0.03	14.3	0.0	2.2	2	0	0	2	2	2	1	PaaX-like	protein
MarR_2	PF12802.2	gi|332797176|ref|YP_004458676.1|	-	0.0034	17.0	0.0	0.0043	16.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|332797176|ref|YP_004458676.1|	-	0.0052	16.1	0.1	0.011	15.1	0.0	1.5	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_11	PF08279.7	gi|332797176|ref|YP_004458676.1|	-	0.01	15.4	0.1	0.016	14.8	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_38	PF13936.1	gi|332797176|ref|YP_004458676.1|	-	0.012	15.1	0.0	0.024	14.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|332797176|ref|YP_004458676.1|	-	0.036	14.3	0.0	0.052	13.8	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_10	PF04967.7	gi|332797176|ref|YP_004458676.1|	-	0.056	13.0	0.2	0.12	11.9	0.0	1.6	2	0	0	2	2	2	0	HTH	DNA	binding	domain
TFIIE_alpha	PF02002.12	gi|332797176|ref|YP_004458676.1|	-	0.079	12.4	0.4	0.096	12.1	0.3	1.3	1	0	0	1	1	1	0	TFIIE	alpha	subunit
CoA_binding_2	PF13380.1	gi|332797177|ref|YP_004458677.1|	-	3e-36	124.1	0.0	3.4e-36	123.9	0.0	1.0	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|332797177|ref|YP_004458677.1|	-	1.4e-06	28.7	0.0	2.1e-06	28.1	0.0	1.3	1	0	0	1	1	1	1	CoA	binding	domain
FAA_hydrolase	PF01557.13	gi|332797178|ref|YP_004458678.1|	-	4.1e-67	225.8	0.0	4.9e-67	225.5	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
KH_2	PF07650.12	gi|332797178|ref|YP_004458678.1|	-	0.00059	19.3	1.1	0.0012	18.3	0.8	1.5	1	0	0	1	1	1	1	KH	domain
NicO	PF03824.11	gi|332797179|ref|YP_004458679.1|	-	0.0066	15.7	6.9	0.0066	15.7	4.8	2.4	2	1	0	2	2	2	1	High-affinity	nickel-transport	protein
DUF423	PF04241.10	gi|332797179|ref|YP_004458679.1|	-	0.0069	16.2	2.2	0.47	10.4	0.1	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF423)
Srg	PF02118.16	gi|332797179|ref|YP_004458679.1|	-	0.8	9.0	14.0	1.6	8.0	7.0	2.0	1	1	1	2	2	2	0	Srg	family	chemoreceptor
DUF1641	PF07849.6	gi|332797180|ref|YP_004458680.1|	-	3.8e-09	36.0	0.0	7.8e-09	35.0	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
MgtE_N	PF03448.12	gi|332797180|ref|YP_004458680.1|	-	7.1e-05	23.0	41.6	1.7	8.9	2.3	8.0	1	1	4	6	6	6	4	MgtE	intracellular	N	domain
DUF4476	PF14771.1	gi|332797180|ref|YP_004458680.1|	-	0.036	14.1	4.9	9.2	6.3	0.1	4.3	2	2	3	5	5	5	0	Domain	of	unknown	function	(DUF4476)
Imm16	PF15565.1	gi|332797180|ref|YP_004458680.1|	-	0.33	10.8	6.0	3.5	7.5	0.1	4.4	3	2	2	5	5	5	0	Immunity	protein	16
CAP59_mtransfer	PF11735.3	gi|332797180|ref|YP_004458680.1|	-	0.37	9.9	6.0	3.3	6.8	0.6	3.3	2	2	0	2	2	2	0	Cryptococcal	mannosyltransferase	1
CDC37_C	PF08564.5	gi|332797180|ref|YP_004458680.1|	-	3.6	7.4	7.7	3	7.7	0.1	4.1	3	1	3	6	6	6	0	Cdc37	C	terminal	domain
DUF2525	PF10733.4	gi|332797180|ref|YP_004458680.1|	-	8.4	6.3	6.7	1.6e+02	2.2	0.0	4.4	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2525)
DUF202	PF02656.10	gi|332797181|ref|YP_004458681.1|	-	1.4e-19	70.0	2.0	2.4e-19	69.3	0.1	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF202)
Claudin_2	PF13903.1	gi|332797181|ref|YP_004458681.1|	-	0.00018	21.2	2.2	0.00032	20.4	1.6	1.4	1	1	0	1	1	1	1	PMP-22/EMP/MP20/Claudin	tight	junction
LysE	PF01810.13	gi|332797181|ref|YP_004458681.1|	-	0.033	13.4	2.9	0.038	13.2	1.8	1.3	1	1	0	1	1	1	0	LysE	type	translocator
Arif-1	PF06770.6	gi|332797181|ref|YP_004458681.1|	-	0.086	12.2	2.0	0.1	11.9	1.4	1.1	1	0	0	1	1	1	0	Actin-rearrangement-inducing	factor	(Arif-1)
SdpI	PF13630.1	gi|332797181|ref|YP_004458681.1|	-	0.22	11.2	11.8	0.12	12.0	2.0	2.2	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
Tetraspannin	PF00335.15	gi|332797181|ref|YP_004458681.1|	-	0.24	10.6	9.1	3.6	6.7	6.4	2.0	1	1	0	1	1	1	0	Tetraspanin	family
TctB	PF07331.6	gi|332797181|ref|YP_004458681.1|	-	0.33	10.6	7.5	0.25	10.9	0.2	2.1	1	1	0	2	2	2	0	Tripartite	tricarboxylate	transporter	TctB	family
MARVEL	PF01284.18	gi|332797181|ref|YP_004458681.1|	-	0.59	9.9	5.1	0.94	9.2	3.5	1.4	1	1	0	1	1	1	0	Membrane-associating	domain
Na_Ca_ex	PF01699.19	gi|332797182|ref|YP_004458682.1|	-	8.9e-32	109.6	33.5	4.3e-21	74.9	7.1	3.1	3	1	0	3	3	3	2	Sodium/calcium	exchanger	protein
RIC3	PF15361.1	gi|332797182|ref|YP_004458682.1|	-	0.18	12.0	0.2	0.31	11.2	0.1	1.3	1	0	0	1	1	1	0	Resistance	to	inhibitors	of	cholinesterase	homologue	3
HTH_24	PF13412.1	gi|332797183|ref|YP_004458683.1|	-	1.8e-25	88.0	6.6	4e-14	51.7	0.4	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|332797183|ref|YP_004458683.1|	-	2.4e-24	84.5	0.7	1.5e-12	46.8	0.1	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332797183|ref|YP_004458683.1|	-	3.7e-10	39.3	0.1	0.00059	19.4	0.0	2.3	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|332797183|ref|YP_004458683.1|	-	3.1e-07	30.0	0.2	0.0084	15.7	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_27	PF13463.1	gi|332797183|ref|YP_004458683.1|	-	1.1e-06	28.8	0.1	0.07	13.4	0.0	2.4	2	0	0	2	2	2	2	Winged	helix	DNA-binding	domain
HTH_28	PF13518.1	gi|332797183|ref|YP_004458683.1|	-	1.3e-06	28.3	0.0	0.0031	17.4	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|332797183|ref|YP_004458683.1|	-	1.4e-06	27.9	0.0	0.0024	17.6	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|332797183|ref|YP_004458683.1|	-	3.5e-06	26.5	1.4	0.0059	16.2	0.2	2.4	2	0	0	2	2	2	2	HTH	domain
HTH_Mga	PF08280.6	gi|332797183|ref|YP_004458683.1|	-	5.9e-05	22.7	1.1	0.22	11.2	0.1	2.4	2	0	0	2	2	2	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
TrmB	PF01978.14	gi|332797183|ref|YP_004458683.1|	-	6.3e-05	22.5	0.2	0.026	14.2	0.0	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|332797183|ref|YP_004458683.1|	-	6.8e-05	22.4	0.0	0.15	11.7	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_23	PF13384.1	gi|332797183|ref|YP_004458683.1|	-	8.8e-05	22.0	0.0	0.56	9.9	0.0	2.5	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_34	PF13601.1	gi|332797183|ref|YP_004458683.1|	-	0.00099	19.0	0.0	0.19	11.7	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
FeoC	PF09012.5	gi|332797183|ref|YP_004458683.1|	-	0.001	18.7	0.0	0.004	16.8	0.0	1.8	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
HTH_9	PF08221.6	gi|332797183|ref|YP_004458683.1|	-	0.0012	18.6	0.1	0.2	11.5	0.0	2.5	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|332797183|ref|YP_004458683.1|	-	0.0021	17.5	0.3	0.043	13.3	0.0	2.4	2	0	0	2	2	2	1	LexA	DNA	binding	domain
Fe_dep_repress	PF01325.14	gi|332797183|ref|YP_004458683.1|	-	0.003	17.4	0.1	2.6	8.0	0.0	2.5	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_10	PF04967.7	gi|332797183|ref|YP_004458683.1|	-	0.0043	16.5	0.1	0.83	9.2	0.0	2.3	2	0	0	2	2	2	1	HTH	DNA	binding	domain
Rrf2	PF02082.15	gi|332797183|ref|YP_004458683.1|	-	0.006	16.6	0.1	0.38	10.9	0.0	2.3	2	0	0	2	2	2	1	Transcriptional	regulator
DDRGK	PF09756.4	gi|332797183|ref|YP_004458683.1|	-	0.0079	15.6	0.3	2.7	7.3	0.0	2.2	2	0	0	2	2	2	1	DDRGK	domain
B-block_TFIIIC	PF04182.7	gi|332797183|ref|YP_004458683.1|	-	0.011	15.6	0.1	0.43	10.4	0.0	2.4	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
IF2_N	PF04760.10	gi|332797183|ref|YP_004458683.1|	-	0.02	14.5	0.0	0.12	12.0	0.0	2.2	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_Tnp_ISL3	PF13542.1	gi|332797183|ref|YP_004458683.1|	-	0.021	14.0	0.0	2.6	7.2	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_1	PF00126.22	gi|332797183|ref|YP_004458683.1|	-	0.023	14.4	0.0	0.067	12.9	0.0	1.7	2	0	0	2	2	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Put_DNA-bind_N	PF06971.8	gi|332797183|ref|YP_004458683.1|	-	0.061	13.0	0.3	0.22	11.3	0.2	2.0	1	0	0	1	1	1	0	Putative	DNA-binding	protein	N-terminus
HTH_IclR	PF09339.5	gi|332797183|ref|YP_004458683.1|	-	0.075	12.6	0.0	11	5.6	0.0	2.3	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
Tn7_Tnp_TnsA_C	PF08721.6	gi|332797183|ref|YP_004458683.1|	-	0.088	12.8	0.2	17	5.5	0.0	2.7	3	0	0	3	3	2	0	TnsA	endonuclease	C	terminal
HTH_30	PF13556.1	gi|332797183|ref|YP_004458683.1|	-	0.16	11.5	0.0	0.39	10.3	0.0	1.5	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
SGL	PF08450.7	gi|332797184|ref|YP_004458684.1|	-	2.1e-80	269.6	0.1	2.4e-80	269.4	0.1	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Lactonase	PF10282.4	gi|332797184|ref|YP_004458684.1|	-	0.011	14.8	0.0	2	7.3	0.0	2.2	2	0	0	2	2	2	0	Lactonase,	7-bladed	beta-propeller
Reg_prop	PF07494.6	gi|332797184|ref|YP_004458684.1|	-	0.023	14.6	0.4	13	6.2	0.0	3.4	2	0	0	2	2	2	0	Two	component	regulator	propeller
Arylesterase	PF01731.15	gi|332797184|ref|YP_004458684.1|	-	0.055	13.4	0.0	0.49	10.4	0.0	2.5	3	0	0	3	3	3	0	Arylesterase
HTH_5	PF01022.15	gi|332797185|ref|YP_004458685.1|	-	1.1e-06	28.1	0.0	2.1e-06	27.2	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|332797185|ref|YP_004458685.1|	-	1.4e-06	27.9	0.1	2.6e-06	27.0	0.1	1.5	1	0	0	1	1	1	1	MarR	family
HTH_36	PF13730.1	gi|332797185|ref|YP_004458685.1|	-	5.6e-05	23.1	0.5	0.00014	21.9	0.4	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|332797185|ref|YP_004458685.1|	-	6.4e-05	22.2	0.2	0.00016	21.0	0.2	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|332797185|ref|YP_004458685.1|	-	9.3e-05	22.0	0.0	0.00019	21.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|332797185|ref|YP_004458685.1|	-	0.00051	19.6	0.1	0.0017	18.0	0.0	1.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|332797185|ref|YP_004458685.1|	-	0.00059	20.0	0.2	0.0021	18.3	0.0	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
DUF1803	PF08820.5	gi|332797185|ref|YP_004458685.1|	-	0.00095	18.8	0.1	0.0018	17.9	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1803)
HTH_IclR	PF09339.5	gi|332797185|ref|YP_004458685.1|	-	0.0021	17.6	0.0	0.0035	16.8	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_45	PF14947.1	gi|332797185|ref|YP_004458685.1|	-	0.0024	17.6	0.5	0.0056	16.4	0.3	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_Crp_2	PF13545.1	gi|332797185|ref|YP_004458685.1|	-	0.0025	17.5	0.0	0.063	13.0	0.0	2.2	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|332797185|ref|YP_004458685.1|	-	0.0027	17.2	0.1	0.058	12.9	0.0	2.5	3	0	0	3	3	3	1	LexA	DNA	binding	domain
HTH_AsnC-type	PF13404.1	gi|332797185|ref|YP_004458685.1|	-	0.0064	16.0	0.1	0.043	13.3	0.1	2.1	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|332797185|ref|YP_004458685.1|	-	0.013	15.1	0.1	0.027	14.1	0.1	1.5	1	0	0	1	1	1	0	HTH	domain
RP-C	PF03428.8	gi|332797185|ref|YP_004458685.1|	-	0.018	14.4	0.0	0.03	13.8	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
HTH_20	PF12840.2	gi|332797185|ref|YP_004458685.1|	-	0.048	13.4	0.0	0.09	12.5	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797185|ref|YP_004458685.1|	-	0.071	13.1	0.1	0.16	11.9	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
RepL	PF05732.6	gi|332797185|ref|YP_004458685.1|	-	0.071	12.3	0.0	0.15	11.2	0.0	1.5	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_3	PF01381.17	gi|332797185|ref|YP_004458685.1|	-	0.11	12.3	0.1	0.22	11.4	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix
HTH_9	PF08221.6	gi|332797185|ref|YP_004458685.1|	-	0.13	12.1	0.0	4.4	7.2	0.0	2.4	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
PadR	PF03551.9	gi|332797186|ref|YP_004458686.1|	-	2.6e-16	59.1	0.2	4.5e-16	58.3	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF4364	PF14277.1	gi|332797186|ref|YP_004458686.1|	-	9.5e-05	22.0	0.0	0.00018	21.1	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
TrmB	PF01978.14	gi|332797186|ref|YP_004458686.1|	-	0.0013	18.3	1.2	0.01	15.5	0.1	2.5	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_42	PF06224.7	gi|332797186|ref|YP_004458686.1|	-	0.0017	17.7	0.0	0.0017	17.7	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|332797186|ref|YP_004458686.1|	-	0.0018	18.0	0.1	0.0038	17.0	0.0	1.6	2	0	0	2	2	1	1	Winged	helix-turn-helix
Penicillinase_R	PF03965.11	gi|332797186|ref|YP_004458686.1|	-	0.0041	17.2	0.0	0.0056	16.7	0.0	1.2	1	0	0	1	1	1	1	Penicillinase	repressor
MarR	PF01047.17	gi|332797186|ref|YP_004458686.1|	-	0.0044	16.6	0.0	0.14	11.9	0.0	2.4	1	1	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|332797186|ref|YP_004458686.1|	-	0.006	15.9	0.0	0.66	9.4	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|332797186|ref|YP_004458686.1|	-	0.0077	15.8	0.9	0.33	10.6	0.0	2.8	4	0	0	4	4	4	1	HTH	domain
FUR	PF01475.14	gi|332797186|ref|YP_004458686.1|	-	0.0095	15.8	0.2	0.024	14.5	0.0	1.7	2	0	0	2	2	2	1	Ferric	uptake	regulator	family
DUF505	PF04458.7	gi|332797186|ref|YP_004458686.1|	-	0.016	13.3	0.1	0.019	13.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
HxlR	PF01638.12	gi|332797186|ref|YP_004458686.1|	-	0.026	14.1	0.1	0.045	13.3	0.1	1.7	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_27	PF13463.1	gi|332797186|ref|YP_004458686.1|	-	0.034	14.4	0.1	0.094	13.0	0.0	1.9	2	1	0	2	2	1	0	Winged	helix	DNA-binding	domain
Replic_Relax	PF13814.1	gi|332797186|ref|YP_004458686.1|	-	0.036	13.9	0.0	0.049	13.4	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
DUF1495	PF07381.6	gi|332797186|ref|YP_004458686.1|	-	0.065	12.9	0.4	0.36	10.5	0.3	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
MerR	PF00376.18	gi|332797186|ref|YP_004458686.1|	-	0.082	12.4	0.4	0.13	11.7	0.0	1.6	2	0	0	2	2	2	0	MerR	family	regulatory	protein
DUF2250	PF10007.4	gi|332797186|ref|YP_004458686.1|	-	0.13	12.1	1.2	4.4	7.2	0.3	2.7	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF3185	PF11381.3	gi|332797187|ref|YP_004458687.1|	-	0.00084	19.0	0.1	0.00084	19.0	0.1	2.4	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF3185)
UPF0016	PF01169.14	gi|332797187|ref|YP_004458687.1|	-	1.9	8.6	11.4	4	7.6	0.8	2.5	2	0	0	2	2	2	0	Uncharacterized	protein	family	UPF0016
IncA	PF04156.9	gi|332797188|ref|YP_004458688.1|	-	0.0043	16.6	0.9	0.0044	16.6	0.6	1.1	1	0	0	1	1	1	1	IncA	protein
DUF2207	PF09972.4	gi|332797188|ref|YP_004458688.1|	-	0.011	14.3	1.1	0.013	14.1	0.8	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF4149	PF13664.1	gi|332797188|ref|YP_004458688.1|	-	0.026	14.5	2.0	0.031	14.3	1.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4149)
Cyto_ox_2	PF02322.10	gi|332797188|ref|YP_004458688.1|	-	0.03	13.5	1.3	0.03	13.4	0.9	1.0	1	0	0	1	1	1	0	Cytochrome	oxidase	subunit	II
DUF3278	PF11683.3	gi|332797188|ref|YP_004458688.1|	-	0.099	12.6	0.4	0.1	12.5	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3278)
DUF766	PF05571.7	gi|332797188|ref|YP_004458688.1|	-	0.12	11.6	1.0	0.14	11.4	0.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF766)
DUF4282	PF14110.1	gi|332797188|ref|YP_004458688.1|	-	0.15	12.2	7.6	0.2	11.8	5.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
MIG-14_Wnt-bd	PF06664.7	gi|332797188|ref|YP_004458688.1|	-	0.33	9.7	2.3	0.35	9.6	1.6	1.0	1	0	0	1	1	1	0	Wnt-binding	factor	required	for	Wnt	secretion
SdpI	PF13630.1	gi|332797188|ref|YP_004458688.1|	-	0.63	9.7	7.8	0.86	9.3	5.4	1.2	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
DUF1469	PF07332.6	gi|332797188|ref|YP_004458688.1|	-	0.83	9.3	8.3	1.1	9.0	5.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF4231	PF14015.1	gi|332797188|ref|YP_004458688.1|	-	2.4	8.1	7.0	3.1	7.8	4.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
Pox_A14	PF05767.7	gi|332797188|ref|YP_004458688.1|	-	2.9	7.9	5.1	4.9	7.1	3.5	1.5	1	1	0	1	1	1	0	Poxvirus	virion	envelope	protein	A14
DUF3040	PF11239.3	gi|332797188|ref|YP_004458688.1|	-	3.2	7.8	7.6	1.8	8.6	3.2	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3040)
ABC2_membrane_4	PF12730.2	gi|332797188|ref|YP_004458688.1|	-	4.4	6.3	10.0	8.9	5.3	6.7	1.5	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
DUF1056	PF06341.6	gi|332797188|ref|YP_004458688.1|	-	4.7	7.3	7.0	6.9	6.7	4.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1056)
Sulf_transp	PF04143.9	gi|332797189|ref|YP_004458689.1|	-	1.2e-10	41.2	26.9	5e-06	26.4	5.3	3.8	3	0	0	3	3	3	2	Sulphur	transport
SUKH-4	PF14435.1	gi|332797189|ref|YP_004458689.1|	-	0.045	13.4	0.0	0.075	12.7	0.0	1.3	1	0	0	1	1	1	0	SUKH-4	immunity	protein
zf-C2H2_jaz	PF12171.3	gi|332797190|ref|YP_004458690.1|	-	0.00012	22.0	3.6	0.00021	21.3	2.5	1.3	1	0	0	1	1	1	1	Zinc-finger	double-stranded	RNA-binding
zf-met	PF12874.2	gi|332797190|ref|YP_004458690.1|	-	0.013	15.7	1.8	0.021	15.0	1.3	1.4	1	0	0	1	1	1	0	Zinc-finger	of	C2H2	type
zf-C2H2_2	PF12756.2	gi|332797190|ref|YP_004458690.1|	-	0.045	13.8	0.7	0.066	13.3	0.5	1.3	1	0	0	1	1	1	0	C2H2	type	zinc-finger	(2	copies)
zf-DBF	PF07535.7	gi|332797190|ref|YP_004458690.1|	-	1.5	8.5	4.2	2.6	7.8	2.9	1.3	1	0	0	1	1	1	0	DBF	zinc	finger
TPP_enzyme_N	PF02776.13	gi|332797191|ref|YP_004458691.1|	-	2.3e-33	115.1	0.0	3.7e-33	114.4	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|332797191|ref|YP_004458691.1|	-	1.6e-14	53.7	0.1	1.1e-13	51.0	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|332797191|ref|YP_004458691.1|	-	5e-12	45.7	0.0	9.6e-12	44.8	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
MFS_1	PF07690.11	gi|332797192|ref|YP_004458692.1|	-	2.8e-30	105.2	74.6	4.6e-24	84.7	26.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|332797192|ref|YP_004458692.1|	-	2.1e-06	26.3	25.6	2.1e-06	26.3	17.8	2.8	1	1	0	1	1	1	1	MFS/sugar	transport	protein
EamA	PF00892.15	gi|332797193|ref|YP_004458693.1|	-	4.5e-29	101.0	41.6	1e-14	54.6	11.1	2.5	2	1	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|332797193|ref|YP_004458693.1|	-	0.00087	19.4	35.1	0.015	15.5	6.6	4.0	1	1	3	4	4	4	3	Multidrug	resistance	efflux	transporter
MHYT	PF03707.11	gi|332797193|ref|YP_004458693.1|	-	0.2	11.7	0.1	0.2	11.7	0.1	4.2	2	2	1	4	4	4	0	Bacterial	signalling	protein	N	terminal	repeat
Rota_VP2	PF05087.7	gi|332797193|ref|YP_004458693.1|	-	0.24	9.3	2.5	0.11	10.4	0.3	1.4	2	0	0	2	2	2	0	Rotavirus	VP2	protein
PMT_2	PF13231.1	gi|332797193|ref|YP_004458693.1|	-	1.4	8.8	27.4	0.025	14.4	3.4	3.6	2	1	2	4	4	4	0	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF4022	PF13214.1	gi|332797194|ref|YP_004458694.1|	-	0.076	13.1	9.2	0.067	13.3	5.3	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4022)
DUF2938	PF11158.3	gi|332797194|ref|YP_004458694.1|	-	0.11	11.7	6.9	0.25	10.6	4.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2938)
PRA1	PF03208.14	gi|332797194|ref|YP_004458694.1|	-	0.2	10.9	12.0	0.39	10.0	8.3	1.5	1	1	0	1	1	1	0	PRA1	family	protein
Peptidase_A24	PF01478.13	gi|332797194|ref|YP_004458694.1|	-	0.51	10.5	7.1	0.17	12.0	2.5	2.0	1	1	0	1	1	1	0	Type	IV	leader	peptidase	family
TM_helix	PF05552.7	gi|332797194|ref|YP_004458694.1|	-	1	9.0	8.0	1.3	8.7	3.5	2.5	2	0	0	2	2	2	0	Conserved	TM	helix
MFS_1	PF07690.11	gi|332797195|ref|YP_004458695.1|	-	1.8e-59	201.2	79.0	1.1e-51	175.6	32.2	2.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332797195|ref|YP_004458695.1|	-	1.1e-11	44.0	10.7	1.1e-11	44.0	7.4	2.5	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|332797195|ref|YP_004458695.1|	-	2.3e-06	26.2	39.7	0.0018	16.7	9.1	3.9	1	1	3	4	4	4	3	MFS/sugar	transport	protein
OATP	PF03137.15	gi|332797195|ref|YP_004458695.1|	-	3.5e-05	22.0	1.8	3.5e-05	22.0	1.2	3.2	3	1	1	4	4	4	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Isochorismatase	PF00857.15	gi|332797196|ref|YP_004458696.1|	-	5.8e-35	120.7	0.0	6.9e-35	120.5	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
GATase_4	PF13230.1	gi|332797197|ref|YP_004458697.1|	-	3.7e-09	35.6	0.0	4.7e-09	35.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|332797197|ref|YP_004458697.1|	-	9.1e-08	32.1	0.0	1.7e-07	31.2	0.0	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|332797197|ref|YP_004458697.1|	-	0.00051	18.8	0.1	0.002	16.9	0.0	1.8	1	1	1	2	2	2	1	Glutamine	amidotransferases	class-II
zf-CDGSH	PF09360.5	gi|332797198|ref|YP_004458698.1|	-	2.4e-14	52.8	0.4	3.9e-14	52.2	0.3	1.3	1	0	0	1	1	1	1	Iron-binding	zinc	finger	CDGSH	type
MORN_2	PF07661.8	gi|332797198|ref|YP_004458698.1|	-	0.033	14.1	0.4	0.22	11.6	0.3	2.0	2	0	0	2	2	2	0	MORN	repeat	variant
HxlR	PF01638.12	gi|332797199|ref|YP_004458699.1|	-	9.9e-22	76.3	0.2	1.2e-21	76.0	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_27	PF13463.1	gi|332797199|ref|YP_004458699.1|	-	9.3e-05	22.6	0.1	0.00013	22.2	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|332797199|ref|YP_004458699.1|	-	0.0002	21.0	0.2	0.00032	20.4	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|332797199|ref|YP_004458699.1|	-	0.00027	20.9	0.1	0.00041	20.3	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|332797199|ref|YP_004458699.1|	-	0.0016	18.0	0.1	0.0023	17.5	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF505	PF04458.7	gi|332797199|ref|YP_004458699.1|	-	0.0023	16.1	0.1	0.0023	16.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
HTH_24	PF13412.1	gi|332797199|ref|YP_004458699.1|	-	0.0025	17.1	0.1	0.0039	16.5	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|332797199|ref|YP_004458699.1|	-	0.0036	17.0	0.0	0.0059	16.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.9	gi|332797199|ref|YP_004458699.1|	-	0.0067	16.1	0.1	0.0095	15.6	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RepL	PF05732.6	gi|332797199|ref|YP_004458699.1|	-	0.017	14.3	0.2	0.033	13.4	0.1	1.5	1	1	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
MarR	PF01047.17	gi|332797199|ref|YP_004458699.1|	-	0.048	13.3	0.1	0.064	12.9	0.1	1.3	1	0	0	1	1	1	0	MarR	family
ACR_tran	PF00873.14	gi|332797200|ref|YP_004458700.1|	-	0.43	7.9	3.9	0.38	8.1	0.4	1.9	2	0	0	2	2	2	0	AcrB/AcrD/AcrF	family
MORN_2	PF07661.8	gi|332797200|ref|YP_004458700.1|	-	4.4	7.6	5.6	0.61	10.2	0.9	1.9	2	0	0	2	2	2	0	MORN	repeat	variant
Antitoxin-MazE	PF04014.13	gi|332797201|ref|YP_004458701.1|	-	1.9e-15	56.1	0.6	2.7e-15	55.6	0.4	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Nha1_C	PF08619.5	gi|332797201|ref|YP_004458701.1|	-	0.0053	16.0	0.2	0.0057	15.9	0.1	1.0	1	0	0	1	1	1	1	Alkali	metal	cation/H+	antiporter	Nha1	C	terminus
PQQ_2	PF13360.1	gi|332797201|ref|YP_004458701.1|	-	0.12	11.8	0.0	0.13	11.7	0.0	1.0	1	0	0	1	1	1	0	PQQ-like	domain
SymE_toxin	PF08845.5	gi|332797201|ref|YP_004458701.1|	-	0.15	11.9	0.1	0.26	11.1	0.0	1.4	1	0	0	1	1	1	0	Toxin	SymE,	type	I	toxin-antitoxin	system
PIN	PF01850.16	gi|332797202|ref|YP_004458702.1|	-	2.3e-16	60.2	2.4	2.8e-16	59.9	1.7	1.0	1	0	0	1	1	1	1	PIN	domain
DUF758	PF05527.6	gi|332797202|ref|YP_004458702.1|	-	0.034	13.7	0.7	0.034	13.7	0.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF758)
GTP-bdg_N	PF13167.1	gi|332797202|ref|YP_004458702.1|	-	0.04	14.0	1.2	5.8	7.1	0.1	2.2	1	1	1	2	2	2	0	GTP-binding	GTPase	N-terminal
Poly_export	PF02563.11	gi|332797203|ref|YP_004458703.1|	-	0.0074	16.0	0.1	0.01	15.5	0.1	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis/export	protein
VirArc_Nuclease	PF12187.3	gi|332797203|ref|YP_004458703.1|	-	0.02	14.2	1.6	0.025	13.9	1.0	1.3	1	1	0	1	1	1	0	Viral/Archaeal	nuclease
HTH_45	PF14947.1	gi|332797204|ref|YP_004458704.1|	-	1.8e-07	30.8	2.6	2.5e-07	30.4	0.7	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_20	PF12840.2	gi|332797204|ref|YP_004458704.1|	-	0.00024	20.8	0.0	0.00057	19.6	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797204|ref|YP_004458704.1|	-	0.00039	20.3	0.4	0.00094	19.1	0.3	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|332797204|ref|YP_004458704.1|	-	0.0004	20.0	0.1	0.0047	16.6	0.0	2.4	1	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|332797204|ref|YP_004458704.1|	-	0.0015	17.8	4.6	0.012	14.9	0.0	3.3	4	0	0	4	4	4	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|332797204|ref|YP_004458704.1|	-	0.014	15.0	0.0	0.027	14.1	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|332797204|ref|YP_004458704.1|	-	0.015	15.6	0.1	0.04	14.2	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|332797204|ref|YP_004458704.1|	-	0.017	14.9	0.3	0.043	13.5	0.2	1.7	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF4423	PF14394.1	gi|332797204|ref|YP_004458704.1|	-	0.023	14.2	0.2	0.13	11.8	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_36	PF13730.1	gi|332797204|ref|YP_004458704.1|	-	0.029	14.4	1.4	7.6	6.7	0.1	3.1	3	0	0	3	3	3	0	Helix-turn-helix	domain
HemN_C	PF06969.11	gi|332797204|ref|YP_004458704.1|	-	0.051	13.6	1.4	0.22	11.6	0.1	2.4	2	1	1	3	3	3	0	HemN	C-terminal	domain
HTH_5	PF01022.15	gi|332797204|ref|YP_004458704.1|	-	0.052	13.2	0.1	1.8	8.2	0.0	2.9	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
Tn916-Xis	PF09035.5	gi|332797204|ref|YP_004458704.1|	-	0.07	13.2	0.1	0.14	12.2	0.0	1.6	1	0	0	1	1	1	0	Excisionase	from	transposon	Tn916
HTH_IclR	PF09339.5	gi|332797204|ref|YP_004458704.1|	-	0.13	11.9	0.0	0.34	10.5	0.0	1.8	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
PP_kinase	PF02503.12	gi|332797205|ref|YP_004458705.1|	-	0.024	14.1	0.1	0.027	13.9	0.1	1.2	1	1	0	1	1	1	0	Polyphosphate	kinase	middle	domain
DUF3361	PF11841.3	gi|332797205|ref|YP_004458705.1|	-	0.025	14.2	0.1	0.025	14.2	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3361)
DUF3647	PF12363.3	gi|332797205|ref|YP_004458705.1|	-	0.039	14.0	0.7	0.043	13.9	0.5	1.1	1	0	0	1	1	1	0	Phage	protein
DUF1690	PF07956.6	gi|332797205|ref|YP_004458705.1|	-	0.066	13.1	0.6	0.076	12.9	0.4	1.1	1	0	0	1	1	1	0	Protein	of	Unknown	function	(DUF1690)
DUF4094	PF13334.1	gi|332797205|ref|YP_004458705.1|	-	0.09	13.1	0.7	0.1	13.0	0.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4094)
DUF4012	PF13196.1	gi|332797205|ref|YP_004458705.1|	-	0.099	12.8	0.1	0.14	12.3	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4012)
PIN	PF01850.16	gi|332797206|ref|YP_004458706.1|	-	1.7e-13	50.9	1.8	2e-13	50.6	1.2	1.0	1	0	0	1	1	1	1	PIN	domain
HEPN	PF05168.9	gi|332797208|ref|YP_004458708.1|	-	6.6e-21	74.3	1.3	8e-21	74.1	0.9	1.1	1	0	0	1	1	1	1	HEPN	domain
DUF812	PF05667.6	gi|332797208|ref|YP_004458708.1|	-	0.0044	15.6	0.0	0.0052	15.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
tRNA-synt_His	PF13393.1	gi|332797208|ref|YP_004458708.1|	-	0.1	11.6	0.1	0.13	11.2	0.1	1.1	1	0	0	1	1	1	0	Histidyl-tRNA	synthetase
NTP_transf_2	PF01909.18	gi|332797209|ref|YP_004458709.1|	-	3e-08	33.8	1.5	4.5e-08	33.3	1.0	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|332797210|ref|YP_004458710.1|	-	1.6e-27	95.7	0.3	1.8e-27	95.5	0.2	1.0	1	0	0	1	1	1	1	HEPN	domain
HEM4	PF02602.10	gi|332797210|ref|YP_004458710.1|	-	0.044	13.0	0.0	0.051	12.8	0.0	1.2	1	0	0	1	1	1	0	Uroporphyrinogen-III	synthase	HemD
NTP_transf_2	PF01909.18	gi|332797211|ref|YP_004458711.1|	-	2.5e-08	34.1	0.1	4.5e-08	33.3	0.0	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|332797211|ref|YP_004458711.1|	-	0.0062	16.5	0.0	0.007	16.4	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
RNase_P_p30	PF01876.11	gi|332797211|ref|YP_004458711.1|	-	0.025	13.8	0.0	0.029	13.6	0.0	1.0	1	0	0	1	1	1	0	RNase	P	subunit	p30
DUF294	PF03445.8	gi|332797211|ref|YP_004458711.1|	-	0.082	12.5	0.0	0.089	12.4	0.0	1.1	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
DUF340	PF03956.8	gi|332797212|ref|YP_004458712.1|	-	7.7e-49	165.5	16.6	7.7e-49	165.5	11.5	1.9	2	0	0	2	2	2	1	Membrane	protein	of	unknown	function	(DUF340)
DUF897	PF05982.7	gi|332797212|ref|YP_004458712.1|	-	1.7e-05	23.8	18.7	0.00067	18.5	1.2	3.0	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF897)
Asp-Al_Ex	PF06826.7	gi|332797212|ref|YP_004458712.1|	-	0.0015	18.0	6.6	0.0015	18.0	4.6	2.4	2	1	1	3	3	3	1	Predicted	Permease	Membrane	Region
DUF1516	PF07457.6	gi|332797212|ref|YP_004458712.1|	-	0.077	13.0	7.7	0.58	10.2	4.1	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1516)
CRT-like	PF08627.5	gi|332797212|ref|YP_004458712.1|	-	0.45	10.4	5.0	0.13	12.2	0.7	2.2	2	0	0	2	2	2	0	CRT-like
DUF973	PF06157.6	gi|332797213|ref|YP_004458713.1|	-	5e-57	193.0	51.3	7.2e-57	192.5	35.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|332797213|ref|YP_004458713.1|	-	2e-05	24.5	40.9	0.017	15.1	3.9	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF996)
Na_H_Exchanger	PF00999.16	gi|332797214|ref|YP_004458714.1|	-	5.6e-26	90.9	51.0	5.6e-26	90.9	35.3	2.1	2	0	0	2	2	2	1	Sodium/hydrogen	exchanger	family
DUF4006	PF13179.1	gi|332797215|ref|YP_004458715.1|	-	0.085	12.4	0.6	0.18	11.4	0.4	1.5	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF4006)
PAP2	PF01569.16	gi|332797216|ref|YP_004458716.1|	-	0.063	12.9	21.1	1.6	8.4	14.6	2.7	1	1	0	1	1	1	0	PAP2	superfamily
7TM-7TMR_HD	PF07698.6	gi|332797216|ref|YP_004458716.1|	-	4.5	6.6	34.6	1.8	7.9	18.5	2.0	1	1	1	2	2	2	0	7TM	receptor	with	intracellular	HD	hydrolase
WND	PF07861.6	gi|332797216|ref|YP_004458716.1|	-	9.9	5.0	8.4	14	4.5	5.8	1.2	1	0	0	1	1	1	0	WisP	family	N-Terminal	Region
DUF3561	PF12084.3	gi|332797217|ref|YP_004458717.1|	-	0.025	14.4	10.9	0.051	13.4	1.0	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3561)
DUF543	PF04418.7	gi|332797217|ref|YP_004458717.1|	-	0.21	11.5	4.4	0.21	11.5	0.0	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF543)
Claudin_2	PF13903.1	gi|332797217|ref|YP_004458717.1|	-	4.7	6.8	10.3	1.5	8.4	3.6	2.4	1	1	1	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
Phosphoesterase	PF04185.9	gi|332797218|ref|YP_004458718.1|	-	1.9e-68	231.4	4.5	4e-68	230.3	3.1	1.5	1	1	0	1	1	1	1	Phosphoesterase	family
CbiQ	PF02361.11	gi|332797219|ref|YP_004458719.1|	-	2.4e-14	53.4	15.6	3.7e-14	52.8	10.8	1.3	1	0	0	1	1	1	1	Cobalt	transport	protein
ABC_tran	PF00005.22	gi|332797220|ref|YP_004458720.1|	-	9.8e-52	174.8	0.3	7.9e-25	87.7	0.1	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|332797220|ref|YP_004458720.1|	-	1.9e-25	90.4	2.8	1.5e-11	44.8	0.0	4.1	2	2	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|332797220|ref|YP_004458720.1|	-	4.9e-16	58.6	5.9	3.1e-08	33.1	0.2	3.3	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|332797220|ref|YP_004458720.1|	-	1.5e-14	53.2	0.8	1.6e-06	27.5	0.0	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|332797220|ref|YP_004458720.1|	-	1.9e-11	44.6	1.2	2.8e-05	24.5	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|332797220|ref|YP_004458720.1|	-	1.4e-10	40.5	1.2	0.00026	20.1	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|332797220|ref|YP_004458720.1|	-	2.9e-10	39.7	0.3	0.0025	16.9	0.1	3.4	4	0	0	4	4	3	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|332797220|ref|YP_004458720.1|	-	7.4e-09	35.8	0.0	0.0009	19.2	0.0	2.5	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_18	PF13238.1	gi|332797220|ref|YP_004458720.1|	-	6.5e-08	32.9	4.8	0.26	11.6	0.2	3.7	3	1	1	4	4	3	3	AAA	domain
MMR_HSR1	PF01926.18	gi|332797220|ref|YP_004458720.1|	-	8.8e-08	32.1	0.6	0.0024	17.8	0.0	2.6	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|332797220|ref|YP_004458720.1|	-	5.6e-07	30.0	0.1	0.023	15.2	0.0	2.5	2	0	0	2	2	2	2	Miro-like	protein
AAA_10	PF12846.2	gi|332797220|ref|YP_004458720.1|	-	7.1e-07	28.9	6.8	0.015	14.7	0.5	3.4	3	1	0	3	3	3	2	AAA-like	domain
AAA_22	PF13401.1	gi|332797220|ref|YP_004458720.1|	-	7.1e-07	29.4	0.1	0.04	14.0	0.0	3.3	3	0	0	3	3	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332797220|ref|YP_004458720.1|	-	8.5e-07	28.6	2.3	0.013	15.0	0.0	3.1	2	1	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_17	PF13207.1	gi|332797220|ref|YP_004458720.1|	-	8.7e-07	29.7	0.5	0.033	15.0	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
ABC_ATPase	PF09818.4	gi|332797220|ref|YP_004458720.1|	-	1.8e-06	26.7	0.8	0.039	12.5	0.1	3.4	4	0	0	4	4	3	2	Predicted	ATPase	of	the	ABC	class
Mg_chelatase	PF01078.16	gi|332797220|ref|YP_004458720.1|	-	3.3e-06	26.4	0.2	0.011	14.9	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|332797220|ref|YP_004458720.1|	-	5.7e-06	25.8	0.1	1.1	8.6	0.0	3.2	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
SbcCD_C	PF13558.1	gi|332797220|ref|YP_004458720.1|	-	1e-05	25.3	0.0	0.00061	19.6	0.0	3.0	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|332797220|ref|YP_004458720.1|	-	1.2e-05	25.0	0.6	0.083	12.5	0.0	2.9	2	1	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|332797220|ref|YP_004458720.1|	-	1.6e-05	24.5	1.8	0.11	12.1	0.1	2.6	2	0	0	2	2	2	2	NACHT	domain
T2SE	PF00437.15	gi|332797220|ref|YP_004458720.1|	-	2.5e-05	23.3	1.6	0.027	13.3	0.0	2.7	3	0	0	3	3	3	2	Type	II/IV	secretion	system	protein
DUF815	PF05673.8	gi|332797220|ref|YP_004458720.1|	-	2.7e-05	23.2	0.4	0.16	10.8	0.0	2.5	3	0	0	3	3	2	2	Protein	of	unknown	function	(DUF815)
AAA_25	PF13481.1	gi|332797220|ref|YP_004458720.1|	-	2.7e-05	23.6	0.0	0.21	10.9	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
UPF0079	PF02367.12	gi|332797220|ref|YP_004458720.1|	-	3.8e-05	23.2	0.6	0.0062	16.1	0.2	2.4	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
RNA_helicase	PF00910.17	gi|332797220|ref|YP_004458720.1|	-	4.3e-05	23.6	0.2	0.18	12.0	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
AAA_33	PF13671.1	gi|332797220|ref|YP_004458720.1|	-	4.8e-05	23.2	0.7	0.075	12.9	0.0	2.8	2	2	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|332797220|ref|YP_004458720.1|	-	6.3e-05	23.1	0.1	0.048	13.8	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|332797220|ref|YP_004458720.1|	-	6.5e-05	22.5	0.1	0.43	10.1	0.1	2.4	2	0	0	2	2	2	2	AAA	domain
NB-ARC	PF00931.17	gi|332797220|ref|YP_004458720.1|	-	6.9e-05	21.8	0.6	0.22	10.3	0.2	2.3	2	0	0	2	2	2	2	NB-ARC	domain
PduV-EutP	PF10662.4	gi|332797220|ref|YP_004458720.1|	-	0.00013	21.5	0.4	0.13	11.7	0.0	2.5	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_14	PF13173.1	gi|332797220|ref|YP_004458720.1|	-	0.00023	21.0	0.1	0.45	10.4	0.0	2.9	3	0	0	3	3	2	1	AAA	domain
AAA_19	PF13245.1	gi|332797220|ref|YP_004458720.1|	-	0.00026	20.6	0.0	0.37	10.5	0.0	2.8	3	0	0	3	3	2	1	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|332797220|ref|YP_004458720.1|	-	0.00029	19.9	0.3	0.56	9.2	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
Dynamin_N	PF00350.18	gi|332797220|ref|YP_004458720.1|	-	0.00033	20.5	2.6	0.43	10.3	0.2	2.7	2	0	0	2	2	2	2	Dynamin	family
AAA_5	PF07728.9	gi|332797220|ref|YP_004458720.1|	-	0.00065	19.4	1.1	0.67	9.6	0.0	2.8	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.10	gi|332797220|ref|YP_004458720.1|	-	0.00074	19.2	0.4	1.6	8.3	0.0	2.7	2	0	0	2	2	2	2	NTPase
Septin	PF00735.13	gi|332797220|ref|YP_004458720.1|	-	0.0011	18.0	0.2	0.038	12.9	0.0	2.2	2	0	0	2	2	2	1	Septin
cobW	PF02492.14	gi|332797220|ref|YP_004458720.1|	-	0.0011	18.4	1.0	0.58	9.5	0.1	2.5	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
Arch_ATPase	PF01637.13	gi|332797220|ref|YP_004458720.1|	-	0.0016	18.1	0.1	1.8	8.2	0.0	2.5	2	0	0	2	2	2	1	Archaeal	ATPase
FeoB_N	PF02421.13	gi|332797220|ref|YP_004458720.1|	-	0.0022	17.3	0.9	1.4	8.1	0.0	2.4	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
PIF1	PF05970.9	gi|332797220|ref|YP_004458720.1|	-	0.0038	16.2	0.1	2.9	6.7	0.0	3.1	3	0	0	3	3	3	0	PIF1-like	helicase
ATP-synt_ab	PF00006.20	gi|332797220|ref|YP_004458720.1|	-	0.004	16.6	0.0	0.64	9.4	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AIG1	PF04548.11	gi|332797220|ref|YP_004458720.1|	-	0.0044	16.1	0.8	0.29	10.1	0.3	2.4	2	0	0	2	2	2	1	AIG1	family
ATP_bind_1	PF03029.12	gi|332797220|ref|YP_004458720.1|	-	0.0049	16.4	0.3	0.99	8.8	0.0	2.7	3	0	0	3	3	3	1	Conserved	hypothetical	ATP	binding	protein
KaiC	PF06745.8	gi|332797220|ref|YP_004458720.1|	-	0.0053	15.9	0.1	0.74	8.8	0.0	2.7	3	0	0	3	3	3	1	KaiC
Viral_helicase1	PF01443.13	gi|332797220|ref|YP_004458720.1|	-	0.0065	16.0	0.0	3	7.2	0.0	2.5	3	0	0	3	3	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_28	PF13521.1	gi|332797220|ref|YP_004458720.1|	-	0.0074	16.2	0.1	5.1	7.0	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
MCM	PF00493.18	gi|332797220|ref|YP_004458720.1|	-	0.0082	14.9	0.2	2	7.1	0.1	2.3	2	0	0	2	2	2	1	MCM2/3/5	family
Sigma54_activat	PF00158.21	gi|332797220|ref|YP_004458720.1|	-	0.0086	15.5	0.3	1	8.8	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_13	PF13166.1	gi|332797220|ref|YP_004458720.1|	-	0.0088	14.5	0.2	8.3	4.7	0.0	3.2	2	1	0	3	3	3	0	AAA	domain
IIGP	PF05049.8	gi|332797220|ref|YP_004458720.1|	-	0.011	14.5	0.2	0.13	11.0	0.0	2.2	2	0	0	2	2	2	0	Interferon-inducible	GTPase	(IIGP)
DUF87	PF01935.12	gi|332797220|ref|YP_004458720.1|	-	0.011	15.5	2.2	0.42	10.3	0.2	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
ArgK	PF03308.11	gi|332797220|ref|YP_004458720.1|	-	0.012	14.4	0.3	1.1	7.9	0.1	2.2	2	0	0	2	2	2	0	ArgK	protein
APS_kinase	PF01583.15	gi|332797220|ref|YP_004458720.1|	-	0.013	15.1	0.9	3.8	7.1	0.0	2.7	3	0	0	3	3	2	0	Adenylylsulphate	kinase
G-alpha	PF00503.15	gi|332797220|ref|YP_004458720.1|	-	0.015	14.0	0.0	2	7.0	0.0	2.2	2	0	0	2	2	2	0	G-protein	alpha	subunit
GTP_EFTU	PF00009.22	gi|332797220|ref|YP_004458720.1|	-	0.019	14.3	0.0	4	6.8	0.0	2.3	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
KAP_NTPase	PF07693.9	gi|332797220|ref|YP_004458720.1|	-	0.02	13.8	0.0	2.7	6.8	0.0	2.3	1	1	1	2	2	2	0	KAP	family	P-loop	domain
AAA_24	PF13479.1	gi|332797220|ref|YP_004458720.1|	-	0.02	14.4	0.3	2.2	7.8	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|332797220|ref|YP_004458720.1|	-	0.028	13.8	0.2	1.1	8.6	0.0	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
PRK	PF00485.13	gi|332797220|ref|YP_004458720.1|	-	0.036	13.6	0.0	8	5.9	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
Pox_A32	PF04665.7	gi|332797220|ref|YP_004458720.1|	-	0.049	12.9	0.2	3.6	6.8	0.0	2.6	3	0	0	3	3	2	0	Poxvirus	A32	protein
CPT	PF07931.7	gi|332797220|ref|YP_004458720.1|	-	0.069	12.7	2.7	5.8	6.5	0.1	2.7	3	0	0	3	3	2	0	Chloramphenicol	phosphotransferase-like	protein
MutS_V	PF00488.16	gi|332797220|ref|YP_004458720.1|	-	0.071	12.5	0.1	1.6	8.0	0.0	2.3	2	0	0	2	2	2	0	MutS	domain	V
Gtr1_RagA	PF04670.7	gi|332797220|ref|YP_004458720.1|	-	0.1	11.7	1.0	9	5.3	0.0	2.4	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
DLIC	PF05783.6	gi|332797220|ref|YP_004458720.1|	-	0.16	10.5	0.3	4.9	5.7	0.0	2.1	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
Pyr_redox	PF00070.22	gi|332797222|ref|YP_004458722.1|	-	6.3e-21	74.5	3.8	1.5e-19	70.1	0.3	2.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332797222|ref|YP_004458722.1|	-	1.9e-16	60.5	0.0	1.4e-14	54.4	0.0	2.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|332797222|ref|YP_004458722.1|	-	2.1e-07	30.1	7.2	0.0004	19.3	0.0	3.8	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|332797222|ref|YP_004458722.1|	-	5.5e-06	26.0	0.0	0.01	15.4	0.0	2.4	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_3	PF13738.1	gi|332797222|ref|YP_004458722.1|	-	1.9e-05	24.7	0.2	0.015	15.3	0.0	2.7	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|332797222|ref|YP_004458722.1|	-	0.0014	17.7	0.2	0.003	16.7	0.1	1.6	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.17	gi|332797222|ref|YP_004458722.1|	-	0.0031	16.4	0.8	0.033	13.0	0.0	2.6	4	0	0	4	4	4	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332797222|ref|YP_004458722.1|	-	0.0067	16.4	0.4	1.5	8.8	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
TrkA_N	PF02254.13	gi|332797222|ref|YP_004458722.1|	-	0.0095	15.9	0.2	0.066	13.2	0.1	2.4	2	1	1	3	3	3	1	TrkA-N	domain
PALP	PF00291.20	gi|332797222|ref|YP_004458722.1|	-	0.011	15.0	0.0	0.013	14.7	0.0	1.2	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
NAD_binding_7	PF13241.1	gi|332797222|ref|YP_004458722.1|	-	0.012	15.9	0.8	0.09	13.0	0.0	2.7	3	0	0	3	3	3	0	Putative	NAD(P)-binding
Oxidored_nitro	PF00148.14	gi|332797222|ref|YP_004458722.1|	-	0.014	14.0	0.0	0.021	13.4	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
HI0933_like	PF03486.9	gi|332797222|ref|YP_004458722.1|	-	0.017	13.6	6.3	0.087	11.2	0.1	3.6	3	1	0	4	4	4	0	HI0933-like	protein
NAD_Gly3P_dh_N	PF01210.18	gi|332797222|ref|YP_004458722.1|	-	0.021	14.5	0.0	0.051	13.3	0.0	1.7	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
XdhC_C	PF13478.1	gi|332797222|ref|YP_004458722.1|	-	0.029	14.6	0.0	0.17	12.2	0.0	2.1	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Limkain-b1	PF11608.3	gi|332797222|ref|YP_004458722.1|	-	0.043	13.5	0.1	0.25	11.1	0.0	2.1	2	0	0	2	2	2	0	Limkain	b1
Lycopene_cycl	PF05834.7	gi|332797222|ref|YP_004458722.1|	-	0.045	12.6	2.4	3.3	6.5	0.1	2.6	2	1	1	3	3	3	0	Lycopene	cyclase	protein
DFP	PF04127.10	gi|332797222|ref|YP_004458722.1|	-	0.045	13.3	0.1	0.11	12.1	0.0	1.6	1	1	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
UDPG_MGDP_dh_N	PF03721.9	gi|332797222|ref|YP_004458722.1|	-	0.047	13.0	1.0	1.2	8.4	0.1	2.2	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Dehydratase_SU	PF02287.10	gi|332797222|ref|YP_004458722.1|	-	0.048	13.4	0.9	10	5.8	0.0	2.9	3	0	0	3	3	3	0	Dehydratase	small	subunit
3HCDH_N	PF02737.13	gi|332797222|ref|YP_004458722.1|	-	0.048	13.3	0.1	0.098	12.2	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.14	gi|332797222|ref|YP_004458722.1|	-	0.071	12.1	2.3	0.13	11.2	0.3	2.1	2	1	0	2	2	2	0	FAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|332797222|ref|YP_004458722.1|	-	0.072	12.6	0.1	0.13	11.8	0.1	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
F420_oxidored	PF03807.12	gi|332797222|ref|YP_004458722.1|	-	0.6	10.5	3.6	0.88	10.0	0.1	2.7	2	1	1	3	3	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
FAD_binding_2	PF00890.19	gi|332797222|ref|YP_004458722.1|	-	1.4	7.6	4.3	9.7	4.9	0.1	2.5	2	1	0	2	2	2	0	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|332797222|ref|YP_004458722.1|	-	3.9	6.4	6.3	0.64	9.0	0.1	2.3	2	1	1	3	3	3	0	FAD	dependent	oxidoreductase
HEPN	PF05168.9	gi|332797223|ref|YP_004458723.1|	-	2.2e-13	50.1	0.3	2.5e-13	49.9	0.2	1.1	1	0	0	1	1	1	1	HEPN	domain
GTP_EFTU	PF00009.22	gi|332797225|ref|YP_004458725.1|	-	6.6e-08	32.2	3.4	2.9e-07	30.1	2.3	1.9	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU	PF00009.22	gi|332797226|ref|YP_004458726.1|	-	1.7e-09	37.4	0.8	2.3e-09	36.9	0.6	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
MMR_HSR1	PF01926.18	gi|332797226|ref|YP_004458726.1|	-	0.0017	18.3	0.2	0.005	16.7	0.1	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
NTP_transf_2	PF01909.18	gi|332797227|ref|YP_004458727.1|	-	1.3e-11	44.6	3.6	2e-11	44.0	2.5	1.3	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Ribosomal_L7Ae	PF01248.21	gi|332797227|ref|YP_004458727.1|	-	0.0054	16.2	0.0	0.0075	15.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
DUF294	PF03445.8	gi|332797227|ref|YP_004458727.1|	-	0.0087	15.6	0.1	0.022	14.3	0.1	1.7	1	1	0	1	1	1	1	Putative	nucleotidyltransferase	DUF294
BolA	PF01722.13	gi|332797227|ref|YP_004458727.1|	-	0.081	12.8	0.0	0.15	12.0	0.0	1.5	1	0	0	1	1	1	0	BolA-like	protein
JmjN	PF02375.12	gi|332797227|ref|YP_004458727.1|	-	0.11	12.0	3.0	0.34	10.4	0.6	2.2	2	0	0	2	2	2	0	jmjN	domain
Sulfolobus_pRN	PF05584.6	gi|332797228|ref|YP_004458728.1|	-	8.2e-18	64.1	3.9	1e-17	63.8	2.7	1.0	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
TrmB	PF01978.14	gi|332797228|ref|YP_004458728.1|	-	0.00014	21.4	0.6	0.00023	20.7	0.5	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|332797228|ref|YP_004458728.1|	-	0.00046	19.5	2.2	0.00082	18.7	1.5	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|332797228|ref|YP_004458728.1|	-	0.00087	19.0	0.1	0.0013	18.4	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|332797228|ref|YP_004458728.1|	-	0.0028	17.7	0.1	0.0036	17.3	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|332797228|ref|YP_004458728.1|	-	0.0056	16.3	0.5	0.0084	15.7	0.3	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.7	gi|332797228|ref|YP_004458728.1|	-	0.0063	16.0	0.1	0.01	15.3	0.0	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|332797228|ref|YP_004458728.1|	-	0.008	15.6	0.4	0.011	15.2	0.3	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_39	PF14090.1	gi|332797228|ref|YP_004458728.1|	-	0.015	14.7	0.5	0.022	14.2	0.3	1.4	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|332797228|ref|YP_004458728.1|	-	0.017	14.9	0.1	0.026	14.3	0.1	1.3	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332797228|ref|YP_004458728.1|	-	0.017	14.7	1.1	0.026	14.1	0.2	1.6	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|332797228|ref|YP_004458728.1|	-	0.024	14.3	0.0	0.033	13.8	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|332797228|ref|YP_004458728.1|	-	0.026	14.8	0.2	0.041	14.1	0.1	1.4	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|332797228|ref|YP_004458728.1|	-	0.028	14.0	0.6	0.031	13.9	0.4	1.1	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_Mga	PF08280.6	gi|332797228|ref|YP_004458728.1|	-	0.032	13.9	1.9	0.046	13.4	1.3	1.3	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF2582	PF10771.4	gi|332797228|ref|YP_004458728.1|	-	0.073	12.9	0.4	0.11	12.4	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2582)
Cullin	PF00888.17	gi|332797228|ref|YP_004458728.1|	-	0.11	11.0	0.1	0.11	10.9	0.1	1.0	1	0	0	1	1	1	0	Cullin	family
HTH_26	PF13443.1	gi|332797228|ref|YP_004458728.1|	-	0.12	12.5	0.1	0.24	11.6	0.0	1.6	1	1	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Phe_tRNA-synt_N	PF02912.13	gi|332797229|ref|YP_004458729.1|	-	0.0032	17.1	1.6	0.11	12.1	0.0	2.7	2	1	1	3	3	3	1	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
PAH	PF02671.16	gi|332797229|ref|YP_004458729.1|	-	0.0049	16.4	2.1	1.6	8.4	1.0	2.7	2	1	0	2	2	2	2	Paired	amphipathic	helix	repeat
Peptidase_S49	PF01343.13	gi|332797229|ref|YP_004458729.1|	-	0.011	15.5	0.0	0.019	14.7	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	S49
HopJ	PF08888.6	gi|332797229|ref|YP_004458729.1|	-	0.018	15.0	0.0	0.028	14.4	0.0	1.3	1	0	0	1	1	1	0	HopJ	type	III	effector	protein
MAP65_ASE1	PF03999.7	gi|332797229|ref|YP_004458729.1|	-	0.019	13.5	1.4	0.024	13.2	1.0	1.1	1	0	0	1	1	1	0	Microtubule	associated	protein	(MAP65/ASE1	family)
Costars	PF14705.1	gi|332797229|ref|YP_004458729.1|	-	0.058	13.3	0.5	0.098	12.6	0.3	1.6	1	1	0	1	1	1	0	Costars
DUF1690	PF07956.6	gi|332797229|ref|YP_004458729.1|	-	0.071	13.0	2.9	0.096	12.6	2.0	1.2	1	0	0	1	1	1	0	Protein	of	Unknown	function	(DUF1690)
Pept_tRNA_hydro	PF01195.14	gi|332797229|ref|YP_004458729.1|	-	0.084	12.3	0.3	4.9	6.6	0.0	2.7	1	1	2	3	3	3	0	Peptidyl-tRNA	hydrolase
RPW8	PF05659.6	gi|332797229|ref|YP_004458729.1|	-	0.088	12.3	1.1	4.3	6.8	0.1	2.4	1	1	1	2	2	2	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
AHS1	PF02682.11	gi|332797229|ref|YP_004458729.1|	-	0.11	11.9	0.0	0.13	11.6	0.0	1.1	1	0	0	1	1	1	0	Allophanate	hydrolase	subunit	1
BLYB	PF05289.6	gi|332797229|ref|YP_004458729.1|	-	0.12	12.2	1.9	0.22	11.3	1.3	1.4	1	0	0	1	1	1	0	Borrelia	hemolysin	accessory	protein
DUF2856	PF11043.3	gi|332797229|ref|YP_004458729.1|	-	0.16	12.1	0.5	0.26	11.4	0.2	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2856)
DUF1104	PF06518.6	gi|332797229|ref|YP_004458729.1|	-	0.56	10.3	3.5	1.1	9.4	0.0	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1104)
KaiC	PF06745.8	gi|332797230|ref|YP_004458730.1|	-	0.0025	16.9	1.9	0.0025	16.9	1.3	1.0	1	0	0	1	1	1	1	KaiC
Haem_bd	PF14376.1	gi|332797230|ref|YP_004458730.1|	-	0.023	14.3	0.3	0.023	14.3	0.2	1.1	1	0	0	1	1	1	0	Haem-binding	domain
PSK_trans_fac	PF07704.6	gi|332797230|ref|YP_004458730.1|	-	0.048	14.3	0.2	0.062	13.9	0.2	1.1	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
YqzH	PF14164.1	gi|332797230|ref|YP_004458730.1|	-	0.052	13.4	3.7	0.88	9.5	0.6	2.2	1	1	1	2	2	2	0	YqzH-like	protein
DUF4003	PF13170.1	gi|332797230|ref|YP_004458730.1|	-	0.071	12.3	3.0	0.078	12.2	2.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4003)
ADSL_C	PF10397.4	gi|332797230|ref|YP_004458730.1|	-	0.12	12.3	0.2	0.46	10.5	0.0	1.8	1	1	1	2	2	2	0	Adenylosuccinate	lyase	C-terminus
DUF4105	PF13387.1	gi|332797230|ref|YP_004458730.1|	-	0.12	11.5	0.6	0.67	9.1	0.1	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4105)
Imm47	PF15586.1	gi|332797230|ref|YP_004458730.1|	-	0.12	12.1	1.0	0.15	11.8	0.7	1.2	1	0	0	1	1	1	0	Immunity	protein	47
MinC_N	PF05209.8	gi|332797230|ref|YP_004458730.1|	-	0.13	12.0	0.8	0.14	11.9	0.6	1.2	1	0	0	1	1	1	0	Septum	formation	inhibitor	MinC,	N-terminal	domain
Rad50_zn_hook	PF04423.9	gi|332797230|ref|YP_004458730.1|	-	0.24	10.8	8.6	0.87	9.0	0.9	2.9	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
Laps	PF10169.4	gi|332797230|ref|YP_004458730.1|	-	0.32	11.2	6.0	0.46	10.7	4.1	1.3	1	0	0	1	1	1	0	Learning-associated	protein
Phage_int_SAM_3	PF14659.1	gi|332797234|ref|YP_004458734.1|	-	0.0027	17.9	2.1	0.0027	17.9	1.4	2.4	2	0	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
BTB	PF00651.26	gi|332797234|ref|YP_004458734.1|	-	0.086	12.8	0.4	0.51	10.3	0.1	2.2	1	1	0	2	2	2	0	BTB/POZ	domain
ParBc	PF02195.13	gi|332797235|ref|YP_004458735.1|	-	1.9e-13	50.3	2.2	1e-12	48.0	0.0	3.0	3	0	0	3	3	3	1	ParB-like	nuclease	domain
Terminase_5	PF06056.7	gi|332797235|ref|YP_004458735.1|	-	0.0098	15.4	0.0	0.026	14.0	0.0	1.7	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
GntR	PF00392.16	gi|332797235|ref|YP_004458735.1|	-	0.017	14.5	1.4	0.47	9.9	0.0	3.3	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	gntR	family
DUF3235	PF11574.3	gi|332797235|ref|YP_004458735.1|	-	0.031	14.5	0.1	1.6	9.0	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3235)
Phage_integrase	PF00589.17	gi|332797236|ref|YP_004458736.1|	-	2.9e-11	43.3	0.1	7.6e-10	38.7	0.0	2.5	2	1	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|332797236|ref|YP_004458736.1|	-	0.00043	20.5	2.4	0.00098	19.4	0.1	2.8	3	0	0	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
TrmB	PF01978.14	gi|332797236|ref|YP_004458736.1|	-	0.035	13.8	2.3	8.9	6.1	0.1	4.2	4	1	0	4	4	4	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2569	PF10754.4	gi|332797237|ref|YP_004458737.1|	-	0.023	14.9	7.4	0.025	14.7	5.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2569)
UPF0093	PF03653.8	gi|332797237|ref|YP_004458737.1|	-	0.81	9.6	4.1	6.4	6.7	0.5	2.0	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0093)
Flavi_NS4A	PF01350.12	gi|332797237|ref|YP_004458737.1|	-	1	8.8	4.7	0.53	9.8	0.2	2.0	2	0	0	2	2	2	0	Flavivirus	non-structural	protein	NS4A
YlaH	PF14036.1	gi|332797237|ref|YP_004458737.1|	-	3.7	7.7	7.5	1.4	9.0	2.7	2.1	1	1	1	2	2	2	0	YlaH-like	protein
PNP_UDP_1	PF01048.15	gi|332797238|ref|YP_004458738.1|	-	1.1e-30	106.3	0.0	1.2e-30	106.2	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
TauE	PF01925.14	gi|332797239|ref|YP_004458739.1|	-	2.8e-38	131.7	36.4	3.3e-38	131.5	25.2	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF3523	PF12037.3	gi|332797239|ref|YP_004458739.1|	-	0.14	11.0	0.2	0.19	10.7	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3523)
DUF3093	PF11292.3	gi|332797240|ref|YP_004458740.1|	-	5e-05	23.1	0.3	6.6e-05	22.7	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3093)
DUF2160	PF09928.4	gi|332797240|ref|YP_004458740.1|	-	0.23	11.5	4.2	0.38	10.8	2.9	1.4	1	0	0	1	1	1	0	Predicted	small	integral	membrane	protein	(DUF2160)
AA_permease	PF00324.16	gi|332797241|ref|YP_004458741.1|	-	0.055	11.8	2.6	0.061	11.6	1.8	1.0	1	0	0	1	1	1	0	Amino	acid	permease
AA_permease_2	PF13520.1	gi|332797241|ref|YP_004458741.1|	-	0.06	11.8	2.0	0.068	11.7	1.4	1.0	1	0	0	1	1	1	0	Amino	acid	permease
Inhibitor_I71	PF12628.2	gi|332797241|ref|YP_004458741.1|	-	0.067	12.8	0.0	0.076	12.6	0.0	1.1	1	0	0	1	1	1	0	Falstatin,	cysteine	peptidase	inhibitor
YesK	PF14150.1	gi|332797244|ref|YP_004458744.1|	-	8.2	6.6	10.8	0.061	13.4	1.0	2.2	3	0	0	3	3	3	0	YesK-like	protein
Radical_SAM	PF04055.16	gi|332797245|ref|YP_004458745.1|	-	2.8e-16	60.1	0.0	1.1e-15	58.1	0.0	2.0	2	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332797245|ref|YP_004458745.1|	-	2e-07	31.2	0.0	4.1e-07	30.2	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|332797245|ref|YP_004458745.1|	-	7.6e-06	25.9	0.0	1.5e-05	24.9	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|332797245|ref|YP_004458745.1|	-	0.0017	18.6	0.0	0.0017	18.6	0.0	1.8	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
PT-TG	PF14449.1	gi|332797245|ref|YP_004458745.1|	-	0.065	13.0	0.0	4.8	7.0	0.0	2.4	2	0	0	2	2	2	0	Pre-toxin	TG
Radical_SAM	PF04055.16	gi|332797246|ref|YP_004458746.1|	-	7.5e-25	88.0	0.0	2.7e-24	86.1	0.0	1.9	1	1	1	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.1	gi|332797246|ref|YP_004458746.1|	-	2.3e-07	31.0	1.2	5.1e-07	29.9	0.8	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.1	gi|332797246|ref|YP_004458746.1|	-	4.8e-07	29.9	0.0	1.2e-06	28.6	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|332797246|ref|YP_004458746.1|	-	8.9e-07	28.9	0.0	2.3e-06	27.6	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
AP_endonuc_2	PF01261.19	gi|332797246|ref|YP_004458746.1|	-	9.3e-05	21.8	0.0	0.0016	17.7	0.0	2.1	2	0	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
Glyco_hydro_97	PF10566.4	gi|332797246|ref|YP_004458746.1|	-	0.02	13.9	0.0	0.64	9.0	0.0	2.1	2	0	0	2	2	2	0	Glycoside	hydrolase	97
Cas_Cas4	PF01930.12	gi|332797246|ref|YP_004458746.1|	-	0.041	13.7	0.1	0.076	12.9	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF83
BtpA	PF03437.10	gi|332797247|ref|YP_004458747.1|	-	1e-80	270.7	0.0	1.2e-80	270.4	0.0	1.0	1	0	0	1	1	1	1	BtpA	family
Trp_syntA	PF00290.15	gi|332797247|ref|YP_004458747.1|	-	9.4e-05	21.0	0.2	0.00072	18.1	0.1	2.1	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.12	gi|332797247|ref|YP_004458747.1|	-	0.0083	15.4	0.2	0.016	14.4	0.0	1.6	2	0	0	2	2	2	1	PcrB	family
His_biosynth	PF00977.16	gi|332797247|ref|YP_004458747.1|	-	0.044	13.0	0.0	0.08	12.1	0.0	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
PA	PF02225.17	gi|332797247|ref|YP_004458747.1|	-	0.06	13.0	0.2	9.9	5.9	0.0	2.3	2	0	0	2	2	2	0	PA	domain
Metallophos	PF00149.23	gi|332797247|ref|YP_004458747.1|	-	0.12	11.7	0.0	0.49	9.7	0.0	1.9	2	0	0	2	2	2	0	Calcineurin-like	phosphoesterase
OrfB_Zn_ribbon	PF07282.6	gi|332797248|ref|YP_004458748.1|	-	1.4e-18	66.3	0.8	4.4e-18	64.7	0.1	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332797248|ref|YP_004458748.1|	-	6.3e-09	35.5	0.6	9.4e-09	35.0	0.4	1.3	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|332797248|ref|YP_004458748.1|	-	0.065	12.8	1.3	0.13	11.8	0.9	1.5	1	0	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
zf-C2HC_2	PF13913.1	gi|332797248|ref|YP_004458748.1|	-	0.092	12.4	0.3	0.2	11.3	0.2	1.5	1	0	0	1	1	1	0	zinc-finger	of	a	C2HC-type
DUF3466	PF11949.3	gi|332797248|ref|YP_004458748.1|	-	0.12	10.8	0.0	0.17	10.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3466)
Fer4_10	PF13237.1	gi|332797249|ref|YP_004458749.1|	-	7.7e-07	28.8	6.2	1e-06	28.4	4.3	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797249|ref|YP_004458749.1|	-	1.7e-06	28.1	6.1	2.6e-06	27.6	4.3	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|332797249|ref|YP_004458749.1|	-	4.6e-06	26.4	0.6	5.4e-06	26.2	0.4	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332797249|ref|YP_004458749.1|	-	1.3e-05	24.8	10.4	0.0005	19.8	1.7	3.0	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|332797249|ref|YP_004458749.1|	-	1.3e-05	25.5	6.1	8.4e-05	22.8	4.2	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332797249|ref|YP_004458749.1|	-	2.5e-05	24.0	4.1	3.6e-05	23.5	2.9	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797249|ref|YP_004458749.1|	-	0.00026	20.7	11.6	0.0011	18.8	2.5	2.5	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|332797249|ref|YP_004458749.1|	-	0.00045	20.1	0.9	0.4	10.7	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|332797249|ref|YP_004458749.1|	-	0.0087	15.6	5.9	0.049	13.2	1.3	2.1	1	1	1	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Sgf11	PF08209.6	gi|332797249|ref|YP_004458749.1|	-	0.011	14.9	0.1	0.011	14.9	0.1	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Fer4	PF00037.22	gi|332797249|ref|YP_004458749.1|	-	0.033	13.7	15.2	3.5	7.3	0.0	4.1	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332797249|ref|YP_004458749.1|	-	0.047	14.0	5.4	0.7	10.2	1.0	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
GCC2_GCC3	PF07699.8	gi|332797249|ref|YP_004458749.1|	-	0.076	12.6	3.4	0.37	10.3	1.2	2.3	1	1	1	2	2	2	0	GCC2	and	GCC3
ETF_QO	PF05187.8	gi|332797249|ref|YP_004458749.1|	-	0.096	12.6	0.1	0.13	12.3	0.1	1.2	1	0	0	1	1	1	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase
Fer4_3	PF12798.2	gi|332797249|ref|YP_004458749.1|	-	0.17	12.5	1.4	0.17	12.5	0.9	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|332797249|ref|YP_004458749.1|	-	0.44	11.0	13.5	0.28	11.6	2.1	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|332797249|ref|YP_004458749.1|	-	1.9	9.3	7.0	27	5.5	0.1	2.3	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
DAO	PF01266.19	gi|332797250|ref|YP_004458750.1|	-	5.7e-15	55.0	0.0	1.3e-06	27.5	0.0	2.3	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|332797250|ref|YP_004458750.1|	-	1.3e-14	54.1	0.0	2.9e-14	53.0	0.0	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|332797250|ref|YP_004458750.1|	-	3.1e-09	36.1	0.2	4.7e-09	35.5	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|332797250|ref|YP_004458750.1|	-	2.1e-08	33.0	0.0	3.3e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332797250|ref|YP_004458750.1|	-	7e-08	31.9	0.0	1.3e-07	30.9	0.0	1.4	1	1	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|332797250|ref|YP_004458750.1|	-	1.7e-05	25.0	0.0	3.1e-05	24.1	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|332797250|ref|YP_004458750.1|	-	3.1e-05	23.1	1.8	4.4e-05	22.6	0.3	1.8	3	0	0	3	3	3	1	Thi4	family
NAD_binding_8	PF13450.1	gi|332797250|ref|YP_004458750.1|	-	5.8e-05	23.0	2.6	0.00023	21.1	0.9	2.6	3	0	0	3	3	3	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|332797250|ref|YP_004458750.1|	-	0.00076	18.4	0.4	0.00076	18.4	0.3	1.6	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.9	gi|332797250|ref|YP_004458750.1|	-	0.00078	19.3	1.8	0.00081	19.3	0.4	1.8	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|332797250|ref|YP_004458750.1|	-	0.0029	16.2	0.4	0.52	8.8	0.0	2.9	2	1	0	3	3	3	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|332797250|ref|YP_004458750.1|	-	0.0064	15.4	0.2	0.046	12.6	0.1	2.0	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|332797250|ref|YP_004458750.1|	-	0.03	14.7	1.7	0.092	13.1	0.9	2.0	2	0	0	2	2	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
ETF_alpha	PF00766.14	gi|332797251|ref|YP_004458751.1|	-	3.1e-34	116.4	1.1	7.2e-32	108.8	0.1	3.1	3	0	0	3	3	3	2	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|332797251|ref|YP_004458751.1|	-	2.4e-10	40.3	0.0	6.3e-10	39.0	0.0	1.6	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF	PF01012.16	gi|332797252|ref|YP_004458752.1|	-	2.3e-32	111.9	0.1	3.2e-32	111.5	0.1	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Acyl-CoA_dh_1	PF00441.19	gi|332797253|ref|YP_004458753.1|	-	7.1e-23	81.3	0.1	1.2e-22	80.5	0.1	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|332797253|ref|YP_004458753.1|	-	2.7e-18	66.5	0.0	4.9e-18	65.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|332797253|ref|YP_004458753.1|	-	6.9e-12	44.7	0.4	1.2e-11	43.9	0.2	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|332797253|ref|YP_004458753.1|	-	2.8e-10	40.7	0.0	5.3e-10	39.8	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Pou	PF00157.12	gi|332797253|ref|YP_004458753.1|	-	0.064	12.9	0.0	0.22	11.1	0.0	1.9	1	0	0	1	1	1	0	Pou	domain	-	N-terminal	to	homeobox	domain
Molybdopterin	PF00384.17	gi|332797254|ref|YP_004458754.1|	-	2.1e-40	138.8	0.0	7.1e-40	137.0	0.0	1.7	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|332797254|ref|YP_004458754.1|	-	1.1e-17	63.8	0.0	2.2e-17	62.8	0.0	1.4	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|332797254|ref|YP_004458754.1|	-	0.00077	19.2	1.6	0.0018	18.0	1.1	1.6	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Glycos_transf_2	PF00535.21	gi|332797255|ref|YP_004458755.1|	-	3e-20	72.5	0.2	5.6e-20	71.6	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|332797255|ref|YP_004458755.1|	-	1.1e-06	28.6	0.0	6.2e-06	26.1	0.0	1.9	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|332797255|ref|YP_004458755.1|	-	0.00035	19.7	0.4	0.00051	19.2	0.3	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_8	PF01501.15	gi|332797255|ref|YP_004458755.1|	-	0.017	14.4	0.0	0.027	13.8	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	8
PaREP1	PF05942.6	gi|332797256|ref|YP_004458756.1|	-	1.2e-22	79.9	0.0	1.7e-22	79.4	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF2953	PF11167.3	gi|332797257|ref|YP_004458757.1|	-	0.064	13.1	1.3	0.064	13.1	0.9	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2953)
DUF1286	PF06939.6	gi|332797258|ref|YP_004458758.1|	-	1.4e-25	89.6	2.6	1.8e-25	89.3	0.8	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|332797258|ref|YP_004458758.1|	-	0.00076	18.8	1.6	0.00097	18.4	1.1	1.2	1	0	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Orthopox_F7	PF05813.7	gi|332797260|ref|YP_004458760.1|	-	0.078	12.8	0.2	0.084	12.7	0.1	1.1	1	0	0	1	1	1	0	Orthopoxvirus	F7	protein
Coatomer_E	PF04733.9	gi|332797261|ref|YP_004458761.1|	-	0.037	13.2	0.0	0.044	12.9	0.0	1.0	1	0	0	1	1	1	0	Coatomer	epsilon	subunit
AAA_14	PF13173.1	gi|332797262|ref|YP_004458762.1|	-	3.8e-21	75.3	0.1	5.5e-21	74.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Med2	PF11214.3	gi|332797263|ref|YP_004458763.1|	-	0.043	13.8	0.3	0.068	13.2	0.1	1.4	1	1	0	1	1	1	0	Mediator	complex	subunit	2
RHH_1	PF01402.16	gi|332797263|ref|YP_004458763.1|	-	0.059	13.2	3.1	0.4	10.6	0.3	2.6	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Trp_dioxygenase	PF03301.8	gi|332797263|ref|YP_004458763.1|	-	0.086	11.9	0.0	0.086	11.9	0.0	1.0	1	0	0	1	1	1	0	Tryptophan	2,3-dioxygenase
PIN	PF01850.16	gi|332797264|ref|YP_004458764.1|	-	4.2e-16	59.3	0.3	4.8e-16	59.1	0.2	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|332797264|ref|YP_004458764.1|	-	0.00017	22.2	0.0	0.00019	22.1	0.0	1.3	1	1	0	1	1	1	1	PIN	domain
Acetyltransf_3	PF13302.1	gi|332797265|ref|YP_004458765.1|	-	2.6e-09	37.3	0.0	4.6e-09	36.5	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|332797265|ref|YP_004458765.1|	-	4.2e-05	23.5	0.8	6.6e-05	22.8	0.1	1.7	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_8	PF13523.1	gi|332797265|ref|YP_004458765.1|	-	0.00045	20.1	0.0	0.00067	19.5	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|332797265|ref|YP_004458765.1|	-	0.0056	16.8	1.2	0.018	15.2	0.0	2.3	3	0	0	3	3	3	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|332797265|ref|YP_004458765.1|	-	0.0071	16.3	0.4	0.0092	15.9	0.3	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|332797265|ref|YP_004458765.1|	-	0.008	15.9	0.1	0.039	13.6	0.0	2.2	2	1	0	2	2	2	1	FR47-like	protein
PIN	PF01850.16	gi|332797266|ref|YP_004458766.1|	-	8.8e-13	48.6	2.8	1e-12	48.4	2.0	1.0	1	0	0	1	1	1	1	PIN	domain
Ph1570	PF09638.5	gi|332797266|ref|YP_004458766.1|	-	0.036	13.8	1.0	0.044	13.5	0.7	1.2	1	0	0	1	1	1	0	Ph1570	protein
IKI3	PF04762.7	gi|332797268|ref|YP_004458768.1|	-	0.0089	13.9	0.0	0.011	13.6	0.0	1.0	1	0	0	1	1	1	1	IKI3	family
GRIP	PF01465.15	gi|332797268|ref|YP_004458768.1|	-	0.044	13.2	0.0	0.081	12.4	0.0	1.4	1	0	0	1	1	1	0	GRIP	domain
Lar_restr_allev	PF14354.1	gi|332797269|ref|YP_004458769.1|	-	0.0056	16.9	0.2	0.0098	16.1	0.2	1.4	1	1	0	1	1	1	1	Restriction	alleviation	protein	Lar
Redoxin	PF08534.5	gi|332797269|ref|YP_004458769.1|	-	0.014	14.8	0.0	0.016	14.7	0.0	1.1	1	0	0	1	1	1	0	Redoxin
Endonuclease_7	PF02945.10	gi|332797269|ref|YP_004458769.1|	-	0.062	13.0	0.4	0.69	9.6	0.2	2.2	1	1	0	1	1	1	0	Recombination	endonuclease	VII
zf-ribbon_3	PF13248.1	gi|332797269|ref|YP_004458769.1|	-	0.082	12.1	1.4	2.7	7.2	0.3	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|332797269|ref|YP_004458769.1|	-	0.094	12.7	0.3	1.6	8.8	0.0	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DZR	PF12773.2	gi|332797269|ref|YP_004458769.1|	-	0.11	12.3	1.0	0.69	9.7	0.6	2.0	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-NADH-PPase	PF09297.6	gi|332797269|ref|YP_004458769.1|	-	0.13	11.8	0.6	0.61	9.6	0.0	2.0	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2072	PF09845.4	gi|332797269|ref|YP_004458769.1|	-	0.14	12.0	1.1	0.27	11.1	0.7	1.4	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
zf-C2H2_4	PF13894.1	gi|332797269|ref|YP_004458769.1|	-	0.29	11.5	1.5	5	7.6	0.1	2.4	2	1	0	2	2	2	0	C2H2-type	zinc	finger
Nudix_N_2	PF14803.1	gi|332797269|ref|YP_004458769.1|	-	0.35	10.5	3.4	1.5	8.6	0.1	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
MS_channel	PF00924.13	gi|332797271|ref|YP_004458771.1|	-	0.026	13.8	0.1	0.041	13.2	0.0	1.3	1	0	0	1	1	1	0	Mechanosensitive	ion	channel
DUF4065	PF13274.1	gi|332797271|ref|YP_004458771.1|	-	0.082	13.6	1.1	0.13	12.9	0.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4065)
PS_pyruv_trans	PF04230.8	gi|332797272|ref|YP_004458772.1|	-	0.051	13.2	0.1	0.059	13.0	0.1	1.1	1	0	0	1	1	1	0	Polysaccharide	pyruvyl	transferase
Polysacc_synt	PF01943.12	gi|332797274|ref|YP_004458774.1|	-	6.4e-11	42.0	8.8	6.4e-11	42.0	6.1	2.5	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|332797274|ref|YP_004458774.1|	-	2.7e-07	30.3	8.9	2.7e-07	30.3	6.2	2.5	2	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
TMEM192	PF14802.1	gi|332797274|ref|YP_004458774.1|	-	0.031	13.1	0.1	0.031	13.1	0.1	2.1	2	0	0	2	2	2	0	TMEM192	family
Polysacc_synt	PF01943.12	gi|332797275|ref|YP_004458775.1|	-	8.6e-13	48.1	32.5	8.6e-13	48.1	22.5	2.8	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|332797275|ref|YP_004458775.1|	-	6.4e-12	45.4	20.4	6.4e-12	45.4	14.1	3.1	1	1	1	3	3	3	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|332797275|ref|YP_004458775.1|	-	4.4e-06	26.5	14.8	4.4e-06	26.5	10.2	3.5	3	1	2	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
Glyco_trans_1_4	PF13692.1	gi|332797276|ref|YP_004458776.1|	-	0.01	15.9	0.0	0.021	14.9	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Methyltransf_21	PF05050.7	gi|332797281|ref|YP_004458781.1|	-	3.4e-13	49.8	0.1	5.4e-13	49.2	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Met_10	PF02475.11	gi|332797281|ref|YP_004458781.1|	-	2.2e-09	37.2	0.1	2.9e-09	36.7	0.1	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_18	PF12847.2	gi|332797281|ref|YP_004458781.1|	-	5.7e-06	26.8	0.0	8e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|332797281|ref|YP_004458781.1|	-	7.1e-05	21.9	0.0	0.00011	21.3	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.1	gi|332797281|ref|YP_004458781.1|	-	0.018	14.7	0.0	0.028	14.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|332797281|ref|YP_004458781.1|	-	0.021	14.2	0.0	0.038	13.3	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
tRNA_U5-meth_tr	PF05958.6	gi|332797281|ref|YP_004458781.1|	-	0.049	12.3	0.0	0.074	11.7	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
DUF1480	PF07351.8	gi|332797281|ref|YP_004458781.1|	-	0.086	12.8	0.0	1.2	9.2	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1480)
FtsJ	PF01728.14	gi|332797281|ref|YP_004458781.1|	-	0.087	12.8	0.0	0.1	12.5	0.0	1.2	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
PCMT	PF01135.14	gi|332797281|ref|YP_004458781.1|	-	0.093	12.2	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Cons_hypoth95	PF03602.10	gi|332797281|ref|YP_004458781.1|	-	0.11	11.9	0.0	0.22	10.9	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Borrelia_rep	PF03183.8	gi|332797282|ref|YP_004458782.1|	-	5.3	7.0	6.3	16	5.5	0.2	2.8	2	0	0	2	2	2	0	Borrelia	repeat	protein
Methyltransf_21	PF05050.7	gi|332797283|ref|YP_004458783.1|	-	0.0006	19.7	0.8	0.00061	19.7	0.6	1.2	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
TraC	PF07820.7	gi|332797283|ref|YP_004458783.1|	-	0.016	15.3	1.7	0.021	14.9	0.5	1.6	1	1	1	2	2	2	0	TraC-like	protein
Met_10	PF02475.11	gi|332797284|ref|YP_004458784.1|	-	1.3e-10	41.2	0.5	1.9e-10	40.6	0.3	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_21	PF05050.7	gi|332797284|ref|YP_004458784.1|	-	3.5e-10	40.0	0.0	4.5e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_18	PF12847.2	gi|332797284|ref|YP_004458784.1|	-	3.7e-07	30.7	0.0	4.6e-07	30.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
V_cholerae_RfbT	PF05575.6	gi|332797284|ref|YP_004458784.1|	-	5.3e-05	22.4	0.0	7e-05	22.0	0.0	1.1	1	0	0	1	1	1	1	Vibrio	cholerae	RfbT	protein
PrmA	PF06325.8	gi|332797284|ref|YP_004458784.1|	-	0.0015	17.6	0.1	0.002	17.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|332797284|ref|YP_004458784.1|	-	0.0022	17.5	0.0	0.0031	17.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|332797284|ref|YP_004458784.1|	-	0.0031	17.0	0.0	0.0042	16.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|332797284|ref|YP_004458784.1|	-	0.0075	15.6	0.0	0.01	15.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|332797284|ref|YP_004458784.1|	-	0.034	14.1	0.0	0.04	13.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
FtsJ	PF01728.14	gi|332797284|ref|YP_004458784.1|	-	0.058	13.3	0.0	0.06	13.3	0.0	1.1	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.1	gi|332797284|ref|YP_004458784.1|	-	0.075	12.7	0.0	0.14	11.8	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	domain
TRM	PF02005.11	gi|332797284|ref|YP_004458784.1|	-	0.075	11.9	0.1	0.095	11.6	0.1	1.1	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Glycos_transf_2	PF00535.21	gi|332797285|ref|YP_004458785.1|	-	1e-17	64.3	0.2	7.8e-17	61.4	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|332797285|ref|YP_004458785.1|	-	0.0012	18.7	0.1	0.0025	17.6	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|332797285|ref|YP_004458785.1|	-	0.017	14.1	0.5	0.025	13.6	0.0	1.5	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|332797285|ref|YP_004458785.1|	-	0.1	12.9	0.0	0.35	11.1	0.0	1.9	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
DUF4550	PF15084.1	gi|332797285|ref|YP_004458785.1|	-	0.12	12.5	0.1	0.24	11.5	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4550)
Antitoxin-MazE	PF04014.13	gi|332797286|ref|YP_004458786.1|	-	0.00075	19.1	0.2	0.0018	17.9	0.1	2.0	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|332797286|ref|YP_004458786.1|	-	0.0011	18.6	0.0	0.0016	18.1	0.0	1.3	1	0	0	1	1	1	1	MraZ	protein
PIN	PF01850.16	gi|332797287|ref|YP_004458787.1|	-	2.8e-05	24.4	0.2	9.3e-05	22.7	0.1	1.7	1	1	1	2	2	2	1	PIN	domain
DDE_Tnp_1_3	PF13612.1	gi|332797287|ref|YP_004458787.1|	-	0.0057	16.4	0.1	0.0066	16.2	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
PaREP1	PF05942.6	gi|332797290|ref|YP_004458790.1|	-	1.1e-33	115.4	3.8	1.5e-33	115.0	2.6	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797290|ref|YP_004458790.1|	-	0.00045	19.8	0.3	0.0011	18.5	0.2	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
PhosphMutase	PF10143.4	gi|332797290|ref|YP_004458790.1|	-	0.091	12.4	0.4	0.54	9.8	0.2	2.1	1	1	1	2	2	2	0	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
HTH_26	PF13443.1	gi|332797292|ref|YP_004458792.1|	-	0.00013	22.0	0.0	0.00043	20.4	0.0	2.0	2	1	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_23	PF13384.1	gi|332797292|ref|YP_004458792.1|	-	0.00049	19.6	0.4	0.0025	17.4	0.0	2.4	3	2	0	3	3	3	1	Homeodomain-like	domain
HTH_19	PF12844.2	gi|332797292|ref|YP_004458792.1|	-	0.00078	19.4	0.4	0.0017	18.3	0.2	1.7	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|332797292|ref|YP_004458792.1|	-	0.005	16.8	0.0	0.019	14.9	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|332797292|ref|YP_004458792.1|	-	0.0085	15.9	0.1	0.033	14.0	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix
HTH_Tnp_1_2	PF13022.1	gi|332797292|ref|YP_004458792.1|	-	0.016	14.9	0.3	0.038	13.7	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	of	insertion	element	transposase
Phage_AlpA	PF05930.7	gi|332797292|ref|YP_004458792.1|	-	0.03	14.0	0.0	0.093	12.4	0.0	1.8	2	0	0	2	2	2	0	Prophage	CP4-57	regulatory	protein	(AlpA)
Terminase_5	PF06056.7	gi|332797292|ref|YP_004458792.1|	-	0.031	13.8	0.1	0.079	12.5	0.0	1.6	1	1	1	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
DUF1836	PF08876.6	gi|332797292|ref|YP_004458792.1|	-	0.044	13.5	0.4	0.3	10.8	0.3	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1836)
DUF87	PF01935.12	gi|332797292|ref|YP_004458792.1|	-	0.051	13.3	0.4	0.06	13.1	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
MEF2_binding	PF09047.5	gi|332797292|ref|YP_004458792.1|	-	0.074	12.7	2.0	0.16	11.6	0.2	2.2	2	0	0	2	2	2	0	MEF2	binding
HTH_17	PF12728.2	gi|332797292|ref|YP_004458792.1|	-	0.091	13.0	0.3	0.24	11.7	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Tnp_1	PF01527.15	gi|332797292|ref|YP_004458792.1|	-	0.11	12.4	0.0	0.22	11.4	0.0	1.5	1	0	0	1	1	1	0	Transposase
HTH_29	PF13551.1	gi|332797292|ref|YP_004458792.1|	-	0.12	12.5	0.0	1.2	9.2	0.0	2.4	1	1	0	1	1	1	0	Winged	helix-turn	helix
Toprim_2	PF13155.1	gi|332797293|ref|YP_004458793.1|	-	0.013	15.7	0.0	0.038	14.3	0.0	1.9	1	1	0	1	1	1	0	Toprim-like
TIP120	PF08623.5	gi|332797293|ref|YP_004458793.1|	-	0.015	14.9	0.1	0.044	13.3	0.1	1.8	1	1	0	1	1	1	0	TATA-binding	protein	interacting	(TIP20)
DUF4041	PF13250.1	gi|332797294|ref|YP_004458794.1|	-	0.043	13.3	0.1	0.11	12.0	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4041)
Mistic	PF11458.3	gi|332797294|ref|YP_004458794.1|	-	0.17	12.2	2.2	0.91	9.9	0.2	2.0	1	1	1	2	2	2	0	Membrane-integrating	protein	Mistic
NTNH_C	PF08470.5	gi|332797295|ref|YP_004458795.1|	-	0.073	12.6	0.6	0.09	12.4	0.4	1.3	1	0	0	1	1	1	0	Nontoxic	nonhaemagglutinin	C-terminal
Cas_APE2256	PF09651.5	gi|332797298|ref|YP_004458798.1|	-	2.1e-12	46.9	0.4	2.4e-12	46.7	0.3	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_APE2256)
IL15	PF02372.10	gi|332797298|ref|YP_004458798.1|	-	0.02	14.6	0.1	0.023	14.4	0.1	1.1	1	0	0	1	1	1	0	Interleukin	15
DUF3139	PF11337.3	gi|332797298|ref|YP_004458798.1|	-	0.031	14.5	0.0	0.046	14.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
ESCRT-II	PF05871.7	gi|332797298|ref|YP_004458798.1|	-	0.073	13.0	0.1	0.09	12.7	0.1	1.1	1	0	0	1	1	1	0	ESCRT-II	complex	subunit
SBP_bac_5	PF00496.17	gi|332797298|ref|YP_004458798.1|	-	0.09	11.5	0.0	0.092	11.5	0.0	1.0	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
AAA_14	PF13173.1	gi|332797299|ref|YP_004458799.1|	-	4.5e-19	68.6	0.1	4.1e-18	65.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|332797299|ref|YP_004458799.1|	-	1.3e-12	47.6	0.1	2.4e-12	46.8	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
DUF234	PF03008.9	gi|332797299|ref|YP_004458799.1|	-	0.0085	16.2	0.5	0.025	14.7	0.1	2.0	1	1	1	2	2	2	1	Archaea	bacterial	proteins	of	unknown	function
PaREP1	PF05942.6	gi|332797300|ref|YP_004458800.1|	-	1.6e-23	82.7	0.4	2.3e-23	82.2	0.2	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Glyco_hydro_31	PF01055.21	gi|332797301|ref|YP_004458801.1|	-	4.9e-129	431.0	0.9	5.9e-129	430.7	0.6	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|332797301|ref|YP_004458801.1|	-	6.1e-15	54.8	0.3	1.5e-14	53.6	0.0	1.8	2	0	0	2	2	2	1	Galactose	mutarotase-like
TM_helix	PF05552.7	gi|332797302|ref|YP_004458802.1|	-	0.016	14.8	2.4	0.016	14.8	1.7	2.1	2	0	0	2	2	2	0	Conserved	TM	helix
Nramp	PF01566.13	gi|332797303|ref|YP_004458803.1|	-	5.4e-45	153.7	26.4	7.2e-45	153.3	18.3	1.2	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
MFS_1	PF07690.11	gi|332797304|ref|YP_004458804.1|	-	1.2e-35	122.8	28.0	1.2e-35	122.8	19.4	2.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332797304|ref|YP_004458804.1|	-	3.4e-34	118.1	27.3	5e-34	117.6	18.9	1.2	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
DUF1228	PF06779.9	gi|332797304|ref|YP_004458804.1|	-	0.0068	16.4	0.4	0.0068	16.4	0.3	3.6	3	1	1	4	4	4	1	Protein	of	unknown	function	(DUF1228)
PPR	PF01535.15	gi|332797304|ref|YP_004458804.1|	-	0.19	11.8	0.6	0.44	10.6	0.4	1.7	1	0	0	1	1	1	0	PPR	repeat
Usp	PF00582.21	gi|332797305|ref|YP_004458805.1|	-	2.2e-29	102.4	0.2	2.6e-29	102.2	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
T2SS-T3SS_pil_N	PF13629.1	gi|332797305|ref|YP_004458805.1|	-	0.12	11.9	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	Pilus	formation	protein	N	terminal	region
Fimbrillin_C	PF15495.1	gi|332797306|ref|YP_004458806.1|	-	0.00076	19.5	0.9	1.2	9.3	0.0	2.8	2	0	0	2	2	2	2	Major	fimbrial	subunit	protein	type	IV,	Fimbrillin,	C-terminal
Y_Y_Y	PF07495.8	gi|332797306|ref|YP_004458806.1|	-	0.0011	18.6	2.4	0.099	12.4	0.3	2.8	2	0	0	2	2	2	2	Y_Y_Y	domain
Rifin_STEVOR	PF02009.11	gi|332797306|ref|YP_004458806.1|	-	8	6.0	8.4	5.4	6.5	4.1	1.9	1	1	1	2	2	2	0	Rifin/stevor	family
zf-HIT	PF04438.11	gi|332797307|ref|YP_004458807.1|	-	0.011	15.4	0.4	0.022	14.4	0.3	1.5	1	1	0	1	1	1	0	HIT	zinc	finger
YiaAB	PF05360.9	gi|332797308|ref|YP_004458808.1|	-	0.72	9.4	10.9	1.7	8.2	1.7	3.7	3	0	0	3	3	3	0	yiaA/B	two	helix	domain
Peptidase_M28	PF04389.12	gi|332797309|ref|YP_004458809.1|	-	2.6e-08	33.8	0.1	4e-07	29.9	0.1	2.2	1	1	0	1	1	1	1	Peptidase	family	M28
AAA_14	PF13173.1	gi|332797310|ref|YP_004458810.1|	-	1.1e-07	31.8	0.1	1.9e-07	31.0	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|332797310|ref|YP_004458810.1|	-	3.3e-07	30.2	2.8	0.0047	16.6	0.0	3.0	2	1	1	3	3	3	2	Archaeal	ATPase
AAA_22	PF13401.1	gi|332797310|ref|YP_004458810.1|	-	0.0019	18.3	0.0	0.54	10.4	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
TrmB	PF01978.14	gi|332797310|ref|YP_004458810.1|	-	0.017	14.8	0.2	0.068	12.8	0.1	2.2	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|332797310|ref|YP_004458810.1|	-	0.018	15.0	1.2	0.075	12.9	0.0	2.7	3	0	0	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
ABC_tran	PF00005.22	gi|332797310|ref|YP_004458810.1|	-	0.04	14.2	0.0	1.6	9.0	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
AAA_25	PF13481.1	gi|332797310|ref|YP_004458810.1|	-	0.044	13.1	0.4	0.5	9.7	0.0	2.4	2	1	1	3	3	3	0	AAA	domain
HSDR_N_2	PF13588.1	gi|332797310|ref|YP_004458810.1|	-	0.047	13.4	0.1	0.11	12.3	0.1	1.6	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
DUF4143	PF13635.1	gi|332797310|ref|YP_004458810.1|	-	0.062	13.4	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
AAA	PF00004.24	gi|332797310|ref|YP_004458810.1|	-	0.067	13.3	0.0	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Viral_helicase1	PF01443.13	gi|332797310|ref|YP_004458810.1|	-	0.12	11.9	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
MarR_2	PF12802.2	gi|332797310|ref|YP_004458810.1|	-	0.13	11.9	0.0	0.55	9.9	0.0	2.0	2	0	0	2	2	2	0	MarR	family
Lactamase_B	PF00753.22	gi|332797311|ref|YP_004458811.1|	-	7.8e-24	84.4	0.0	1e-23	83.9	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332797311|ref|YP_004458811.1|	-	7.2e-06	25.6	0.0	8.5e-06	25.4	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF3876	PF12992.2	gi|332797311|ref|YP_004458811.1|	-	0.13	12.2	0.2	0.26	11.2	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3876)
DUF3970	PF13113.1	gi|332797311|ref|YP_004458811.1|	-	1.6	8.4	5.7	1.2	8.8	1.6	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3970)
Peptidase_U32	PF01136.14	gi|332797312|ref|YP_004458812.1|	-	5.7e-21	74.5	0.0	1.2e-20	73.4	0.0	1.5	1	1	0	1	1	1	1	Peptidase	family	U32
DUF3996	PF13161.1	gi|332797312|ref|YP_004458812.1|	-	0.005	16.4	0.5	0.0085	15.7	0.3	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3996)
TIR-like	PF10137.4	gi|332797312|ref|YP_004458812.1|	-	0.068	12.7	0.0	0.2	11.2	0.0	1.8	2	0	0	2	2	2	0	Predicted	nucleotide-binding	protein	containing	TIR-like	domain
GBV-C_env	PF12786.2	gi|332797313|ref|YP_004458813.1|	-	0.44	8.9	1.2	0.62	8.4	0.8	1.1	1	0	0	1	1	1	0	GB	virus	C	genotype	envelope
PaREP1	PF05942.6	gi|332797315|ref|YP_004458815.1|	-	2.7e-28	98.1	0.7	3.7e-28	97.7	0.5	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
OrfB_Zn_ribbon	PF07282.6	gi|332797317|ref|YP_004458817.1|	-	9.2e-22	76.4	0.4	2.6e-21	75.0	0.3	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332797317|ref|YP_004458817.1|	-	2.7e-08	33.5	1.3	2.8e-08	33.4	0.2	1.6	2	0	0	2	2	2	1	Probable	transposase
zf-RING_4	PF14570.1	gi|332797317|ref|YP_004458817.1|	-	0.055	13.0	3.2	0.05	13.1	1.3	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
CcoS	PF03597.10	gi|332797319|ref|YP_004458819.1|	-	0.034	13.6	0.6	0.034	13.6	0.4	2.4	3	0	0	3	3	3	0	Cytochrome	oxidase	maturation	protein	cbb3-type
DUF4064	PF13273.1	gi|332797319|ref|YP_004458819.1|	-	0.8	9.8	9.7	1.1	9.3	6.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF4239	PF14023.1	gi|332797319|ref|YP_004458819.1|	-	2.1	7.6	6.7	3.3	7.0	4.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4239)
DUF2096	PF09869.4	gi|332797320|ref|YP_004458820.1|	-	0.013	15.4	0.3	1.9	8.3	0.0	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
DUF217	PF02697.9	gi|332797320|ref|YP_004458820.1|	-	0.088	13.0	4.2	0.045	13.9	1.1	1.9	2	1	0	2	2	2	0	Uncharacterized	ACR,	COG1753
IF2_N	PF04760.10	gi|332797320|ref|YP_004458820.1|	-	0.24	11.1	1.8	0.52	10.0	0.1	2.5	2	1	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
RHH_1	PF01402.16	gi|332797320|ref|YP_004458820.1|	-	0.55	10.2	2.6	6.9	6.7	0.2	2.9	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
PIN	PF01850.16	gi|332797321|ref|YP_004458821.1|	-	4.2e-06	27.0	0.1	4.6e-06	26.9	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
PMAIP1	PF15150.1	gi|332797321|ref|YP_004458821.1|	-	0.059	13.1	0.0	0.082	12.6	0.0	1.3	1	0	0	1	1	1	0	Phorbol-12-myristate-13-acetate-induced
MFS_1	PF07690.11	gi|332797322|ref|YP_004458822.1|	-	3.2e-19	68.8	60.5	2.3e-12	46.3	24.5	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332797322|ref|YP_004458822.1|	-	3.6e-18	65.3	35.9	3e-14	52.4	9.6	2.1	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|332797322|ref|YP_004458822.1|	-	2.3e-08	32.8	30.1	3e-08	32.5	11.8	2.6	1	1	1	2	2	2	2	MFS/sugar	transport	protein
DUF2204	PF09970.4	gi|332797323|ref|YP_004458823.1|	-	0.00098	18.6	1.0	0.043	13.2	0.1	2.4	1	1	1	3	3	3	2	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
DUF1043	PF06295.7	gi|332797325|ref|YP_004458825.1|	-	0.022	14.3	0.1	0.025	14.1	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1043)
Sod_Fe_C	PF02777.13	gi|332797325|ref|YP_004458825.1|	-	0.062	13.1	0.2	0.49	10.2	0.0	1.9	2	0	0	2	2	2	0	Iron/manganese	superoxide	dismutases,	C-terminal	domain
HTH_24	PF13412.1	gi|332797326|ref|YP_004458826.1|	-	0.12	11.8	0.1	0.2	11.0	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Radical_SAM	PF04055.16	gi|332797327|ref|YP_004458827.1|	-	2.6e-17	63.5	1.7	1.3e-16	61.2	0.2	2.7	3	1	1	4	4	4	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332797327|ref|YP_004458827.1|	-	3e-10	40.3	0.0	7.3e-10	39.1	0.0	1.8	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|332797327|ref|YP_004458827.1|	-	2.8e-08	33.7	0.0	7.1e-08	32.4	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Inhibitor_I9	PF05922.11	gi|332797327|ref|YP_004458827.1|	-	0.021	15.3	0.0	0.19	12.3	0.0	2.3	2	0	0	2	2	2	0	Peptidase	inhibitor	I9
SPASM	PF13186.1	gi|332797327|ref|YP_004458827.1|	-	0.049	13.9	1.0	0.53	10.6	0.3	2.7	2	1	0	2	2	2	0	Iron-sulfur	cluster-binding	domain
Arc_PepC	PF06819.6	gi|332797327|ref|YP_004458827.1|	-	0.072	13.0	0.2	0.21	11.5	0.1	1.7	1	0	0	1	1	1	0	Archaeal	Peptidase	A24	C-terminal	Domain
ABM	PF03992.11	gi|332797328|ref|YP_004458828.1|	-	7e-14	51.6	0.0	8.1e-14	51.4	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
SOR	PF07682.6	gi|332797328|ref|YP_004458828.1|	-	0.00034	19.3	0.2	0.053	12.1	0.0	2.0	1	1	1	2	2	2	2	Sulphur	oxygenase	reductase
Cytochrom_B_N_2	PF13631.1	gi|332797329|ref|YP_004458829.1|	-	2.4e-57	193.3	11.6	2.4e-57	193.3	8.0	3.4	2	2	1	3	3	3	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|332797329|ref|YP_004458829.1|	-	0.011	15.8	1.9	0.011	15.8	1.3	4.5	4	2	3	7	7	7	0	Cytochrome	b(C-terminal)/b6/petD
CopD	PF05425.8	gi|332797329|ref|YP_004458829.1|	-	0.61	10.3	21.3	7.3	6.8	1.1	4.0	2	1	1	3	3	3	0	Copper	resistance	protein	D
Rieske	PF00355.21	gi|332797330|ref|YP_004458830.1|	-	4.5e-10	38.9	2.1	1e-09	37.8	1.4	1.6	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
EB_dh	PF09459.5	gi|332797332|ref|YP_004458832.1|	-	1.6e-75	253.9	0.8	1.9e-75	253.7	0.5	1.1	1	0	0	1	1	1	1	Ethylbenzene	dehydrogenase
MttA_Hcf106	PF02416.11	gi|332797334|ref|YP_004458834.1|	-	8.1e-09	34.4	7.7	3.3e-08	32.5	5.3	1.9	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF3450	PF11932.3	gi|332797334|ref|YP_004458834.1|	-	0.00031	20.1	6.0	0.00031	20.1	4.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3450)
DUF4446	PF14584.1	gi|332797334|ref|YP_004458834.1|	-	0.0026	17.6	1.1	0.0032	17.2	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
DUF3573	PF12097.3	gi|332797334|ref|YP_004458834.1|	-	0.0029	16.2	3.4	0.0029	16.2	2.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3573)
CHD5	PF04420.9	gi|332797334|ref|YP_004458834.1|	-	0.0031	17.2	3.0	0.0036	16.9	2.1	1.1	1	0	0	1	1	1	1	CHD5-like	protein
Uds1	PF15456.1	gi|332797334|ref|YP_004458834.1|	-	0.027	14.4	5.5	0.029	14.3	3.8	1.1	1	0	0	1	1	1	0	Up-regulated	During	Septation
MMR1	PF08505.5	gi|332797334|ref|YP_004458834.1|	-	0.048	13.6	3.7	0.048	13.7	2.6	1.0	1	0	0	1	1	1	0	Mitochondrial	Myo2	receptor-related	protein
Mnd1	PF03962.10	gi|332797334|ref|YP_004458834.1|	-	0.14	11.7	8.9	0.15	11.6	6.2	1.1	1	0	0	1	1	1	0	Mnd1	family
GnsAB	PF08178.6	gi|332797334|ref|YP_004458834.1|	-	0.15	11.7	0.3	1.2	8.8	0.0	2.1	2	0	0	2	2	2	0	GnsA/GnsB	family
WD-3	PF09765.4	gi|332797334|ref|YP_004458834.1|	-	0.29	10.3	5.8	0.35	10.1	4.0	1.1	1	0	0	1	1	1	0	WD-repeat	region
Allexi_40kDa	PF05549.6	gi|332797334|ref|YP_004458834.1|	-	0.36	10.0	2.4	0.37	10.0	1.7	1.0	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
AAA_23	PF13476.1	gi|332797334|ref|YP_004458834.1|	-	0.37	11.0	7.5	0.37	11.0	5.2	1.1	1	0	0	1	1	1	0	AAA	domain
Phage_GPO	PF05929.6	gi|332797334|ref|YP_004458834.1|	-	0.42	9.8	8.6	0.46	9.6	6.0	1.0	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
Atg14	PF10186.4	gi|332797334|ref|YP_004458834.1|	-	0.59	9.0	12.0	0.66	8.8	8.3	1.0	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF2937	PF11157.3	gi|332797334|ref|YP_004458834.1|	-	0.72	9.1	11.5	0.29	10.4	5.9	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2937)
MerR-DNA-bind	PF09278.6	gi|332797334|ref|YP_004458834.1|	-	1	9.8	9.0	1.7	9.1	6.3	1.4	1	1	0	1	1	1	0	MerR,	DNA	binding
Ax_dynein_light	PF10211.4	gi|332797334|ref|YP_004458834.1|	-	1.2	8.9	13.8	1.5	8.6	9.5	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
DUF4140	PF13600.1	gi|332797334|ref|YP_004458834.1|	-	1.3	9.5	8.4	1.8	9.0	5.8	1.3	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
HR1	PF02185.11	gi|332797334|ref|YP_004458834.1|	-	2.6	7.8	17.1	4.6	7.0	11.8	1.4	1	1	0	1	1	1	0	Hr1	repeat
DUF4407	PF14362.1	gi|332797334|ref|YP_004458834.1|	-	2.9	6.7	13.4	4.2	6.2	9.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
EAP30	PF04157.11	gi|332797334|ref|YP_004458834.1|	-	5.1	6.1	17.1	6.6	5.8	11.9	1.1	1	0	0	1	1	1	0	EAP30/Vps36	family
V_ATPase_I	PF01496.14	gi|332797334|ref|YP_004458834.1|	-	7.2	4.3	9.4	6.1	4.5	6.2	1.2	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF2681	PF10883.3	gi|332797334|ref|YP_004458834.1|	-	7.2	6.8	20.0	6.1	7.1	1.5	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2681)
Spc24	PF08286.6	gi|332797334|ref|YP_004458834.1|	-	8.9	6.0	11.9	19	4.9	8.2	1.7	1	1	0	1	1	1	0	Spc24	subunit	of	Ndc80
MHC2-interact	PF09307.5	gi|332797335|ref|YP_004458835.1|	-	1.3e-05	24.9	1.1	0.00088	19.0	0.0	2.0	1	1	1	2	2	2	1	CLIP,	MHC2	interacting
MttA_Hcf106	PF02416.11	gi|332797335|ref|YP_004458835.1|	-	1.5e-05	24.0	2.1	3.1e-05	23.0	1.4	1.7	1	1	0	1	1	1	1	mttA/Hcf106	family
FtsK_SpoIIIE	PF01580.13	gi|332797335|ref|YP_004458835.1|	-	0.0017	17.9	0.1	0.0018	17.7	0.1	1.1	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
DUF948	PF06103.6	gi|332797335|ref|YP_004458835.1|	-	0.0018	18.0	0.3	0.044	13.6	0.1	2.0	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF948)
Prefoldin_2	PF01920.15	gi|332797335|ref|YP_004458835.1|	-	0.002	17.8	5.0	0.19	11.4	0.5	2.2	2	0	0	2	2	2	2	Prefoldin	subunit
AKNA	PF12443.3	gi|332797335|ref|YP_004458835.1|	-	0.0023	17.8	3.1	0.0056	16.6	0.4	2.0	1	1	1	2	2	2	1	AT-hook-containing	transcription	factor
Mnd1	PF03962.10	gi|332797335|ref|YP_004458835.1|	-	0.0033	17.1	4.3	0.0039	16.8	3.0	1.1	1	0	0	1	1	1	1	Mnd1	family
NOD	PF06816.8	gi|332797335|ref|YP_004458835.1|	-	0.0096	14.9	0.1	0.071	12.2	0.0	2.1	1	1	1	2	2	2	1	NOTCH	protein
FlxA	PF14282.1	gi|332797335|ref|YP_004458835.1|	-	0.011	15.6	2.0	0.014	15.3	0.3	1.7	2	0	0	2	2	2	0	FlxA-like	protein
GrpE	PF01025.14	gi|332797335|ref|YP_004458835.1|	-	0.02	14.4	4.3	0.42	10.1	0.2	2.0	2	0	0	2	2	2	0	GrpE
IMD	PF08397.6	gi|332797335|ref|YP_004458835.1|	-	0.025	13.8	0.9	0.028	13.7	0.6	1.1	1	0	0	1	1	1	0	IRSp53/MIM	homology	domain
DivIC	PF04977.10	gi|332797335|ref|YP_004458835.1|	-	0.028	13.8	4.4	0.072	12.5	0.9	2.2	2	0	0	2	2	2	0	Septum	formation	initiator
Fib_alpha	PF08702.5	gi|332797335|ref|YP_004458835.1|	-	0.031	14.4	2.4	0.097	12.7	1.7	1.7	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF1192	PF06698.6	gi|332797335|ref|YP_004458835.1|	-	0.044	13.5	0.4	0.044	13.5	0.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Syntaxin-6_N	PF09177.6	gi|332797335|ref|YP_004458835.1|	-	0.044	14.1	1.4	0.15	12.4	0.6	1.8	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
CBP4	PF07960.6	gi|332797335|ref|YP_004458835.1|	-	0.054	13.1	3.2	0.072	12.7	2.2	1.2	1	0	0	1	1	1	0	CBP4
DUF4140	PF13600.1	gi|332797335|ref|YP_004458835.1|	-	0.056	13.9	0.7	0.056	13.9	0.5	1.8	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Paralemmin	PF03285.10	gi|332797335|ref|YP_004458835.1|	-	0.057	12.8	0.4	0.057	12.8	0.3	1.5	2	0	0	2	2	2	0	Paralemmin
DivIVA	PF05103.8	gi|332797335|ref|YP_004458835.1|	-	0.062	13.3	3.5	0.12	12.4	2.4	1.5	1	1	0	1	1	1	0	DivIVA	protein
Spc24	PF08286.6	gi|332797335|ref|YP_004458835.1|	-	0.065	12.9	3.5	1.8	8.3	0.3	2.1	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
DUF1469	PF07332.6	gi|332797335|ref|YP_004458835.1|	-	0.067	12.9	1.1	0.067	12.9	0.0	1.5	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1469)
Med9	PF07544.8	gi|332797335|ref|YP_004458835.1|	-	0.067	12.9	5.0	0.14	11.9	1.0	2.1	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF1043	PF06295.7	gi|332797335|ref|YP_004458835.1|	-	0.068	12.8	0.3	0.068	12.8	0.2	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1043)
DUF342	PF03961.8	gi|332797335|ref|YP_004458835.1|	-	0.069	11.5	2.4	0.076	11.4	1.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DUF2951	PF11166.3	gi|332797335|ref|YP_004458835.1|	-	0.077	12.8	6.7	0.099	12.5	0.4	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2951)
Seryl_tRNA_N	PF02403.17	gi|332797335|ref|YP_004458835.1|	-	0.085	12.8	4.3	4.2	7.4	0.2	2.1	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF1640	PF07798.6	gi|332797335|ref|YP_004458835.1|	-	0.09	12.8	1.1	0.14	12.2	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
SPX	PF03105.14	gi|332797335|ref|YP_004458835.1|	-	0.094	12.4	2.3	0.12	12.0	1.6	1.2	1	0	0	1	1	1	0	SPX	domain
DUF3375	PF11855.3	gi|332797335|ref|YP_004458835.1|	-	0.094	11.4	2.7	0.27	9.9	0.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3375)
DUF4200	PF13863.1	gi|332797335|ref|YP_004458835.1|	-	0.095	12.6	7.2	0.29	11.0	1.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
DUF2802	PF10975.3	gi|332797335|ref|YP_004458835.1|	-	0.099	12.4	2.8	0.96	9.2	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2802)
CENP-Q	PF13094.1	gi|332797335|ref|YP_004458835.1|	-	0.1	12.6	4.1	3	7.8	0.9	2.1	2	0	0	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF1664	PF07889.7	gi|332797335|ref|YP_004458835.1|	-	0.12	12.1	1.2	0.72	9.6	0.8	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
ADIP	PF11559.3	gi|332797335|ref|YP_004458835.1|	-	0.13	12.1	3.8	0.97	9.3	0.9	2.1	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Snf7	PF03357.16	gi|332797335|ref|YP_004458835.1|	-	0.17	11.2	6.4	1.5	8.1	2.9	2.0	1	1	1	2	2	2	0	Snf7
TMF_TATA_bd	PF12325.3	gi|332797335|ref|YP_004458835.1|	-	0.17	11.6	6.3	0.57	9.9	0.9	2.1	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Snapin_Pallidin	PF14712.1	gi|332797335|ref|YP_004458835.1|	-	0.22	11.8	4.3	8.3	6.7	0.0	2.2	1	1	1	2	2	2	0	Snapin/Pallidin
BLOC1_2	PF10046.4	gi|332797335|ref|YP_004458835.1|	-	0.23	11.5	2.6	5.1	7.2	0.3	2.3	2	1	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
TMF_DNA_bd	PF12329.3	gi|332797335|ref|YP_004458835.1|	-	0.31	10.8	9.7	0.62	9.9	2.0	2.1	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
DUF972	PF06156.8	gi|332797335|ref|YP_004458835.1|	-	0.35	11.2	3.3	7.7	6.9	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
DASH_Dad3	PF08656.5	gi|332797335|ref|YP_004458835.1|	-	0.51	10.0	2.7	5.5	6.7	0.3	2.1	2	0	0	2	2	2	0	DASH	complex	subunit	Dad3
DUF904	PF06005.7	gi|332797335|ref|YP_004458835.1|	-	1.3	9.3	7.2	0.5	10.6	1.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DUF848	PF05852.6	gi|332797335|ref|YP_004458835.1|	-	1.8	8.4	6.3	2.6	7.8	0.6	2.1	1	1	1	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
V_ATPase_I	PF01496.14	gi|332797335|ref|YP_004458835.1|	-	2.1	6.1	5.7	0.91	7.2	2.7	1.3	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
TatC	PF00902.13	gi|332797336|ref|YP_004458836.1|	-	1.7e-44	151.7	26.0	1.7e-44	151.7	18.0	1.3	1	1	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Pro_CA	PF00484.14	gi|332797337|ref|YP_004458837.1|	-	1.6e-07	31.4	0.2	4.5e-07	29.9	0.1	1.7	1	1	0	1	1	1	1	Carbonic	anhydrase
DUF556	PF04476.8	gi|332797337|ref|YP_004458837.1|	-	0.079	12.1	0.1	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF556)
Arch_ATPase	PF01637.13	gi|332797338|ref|YP_004458838.1|	-	5.8e-28	98.1	2.5	1.2e-27	97.1	1.8	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|332797338|ref|YP_004458838.1|	-	8.7e-09	35.3	0.1	0.0029	17.4	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|332797338|ref|YP_004458838.1|	-	9.6e-07	28.9	0.0	2.4e-06	27.6	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_35	PF14516.1	gi|332797338|ref|YP_004458838.1|	-	0.00031	19.4	0.1	0.27	9.8	0.1	2.3	1	1	1	2	2	2	2	AAA-like	domain
Bac_DnaA	PF00308.13	gi|332797338|ref|YP_004458838.1|	-	0.0015	18.2	0.0	0.0033	17.0	0.0	1.5	1	0	0	1	1	1	1	Bacterial	dnaA	protein
AAA	PF00004.24	gi|332797338|ref|YP_004458838.1|	-	0.014	15.5	0.1	0.1	12.7	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrmB	PF01978.14	gi|332797338|ref|YP_004458838.1|	-	0.017	14.8	0.2	0.21	11.3	0.0	2.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
NGF	PF00243.13	gi|332797338|ref|YP_004458838.1|	-	0.053	13.2	0.0	0.092	12.4	0.0	1.3	1	0	0	1	1	1	0	Nerve	growth	factor	family
HTH_36	PF13730.1	gi|332797338|ref|YP_004458838.1|	-	0.11	12.6	3.7	0.3	11.2	0.1	3.1	3	1	0	3	3	3	0	Helix-turn-helix	domain
PIN	PF01850.16	gi|332797339|ref|YP_004458839.1|	-	7.9e-07	29.4	0.2	1.3e-06	28.7	0.1	1.3	1	1	0	1	1	1	1	PIN	domain
Chlam_vir	PF05475.6	gi|332797339|ref|YP_004458839.1|	-	0.15	11.1	0.5	0.18	10.8	0.3	1.2	1	0	0	1	1	1	0	Chlamydia	virulence	protein	PGP3-D
zf-C2H2	PF00096.21	gi|332797341|ref|YP_004458841.1|	-	7e-06	26.0	4.8	0.0044	17.2	0.2	2.2	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-C2H2_6	PF13912.1	gi|332797341|ref|YP_004458841.1|	-	0.0029	17.4	4.2	0.02	14.7	0.2	2.3	2	0	0	2	2	2	1	C2H2-type	zinc	finger
zf-H2C2_2	PF13465.1	gi|332797341|ref|YP_004458841.1|	-	0.0083	16.3	5.2	1.6	9.1	0.9	2.7	3	0	0	3	3	3	2	Zinc-finger	double	domain
Rubredoxin	PF00301.15	gi|332797341|ref|YP_004458841.1|	-	0.009	15.8	0.1	0.012	15.4	0.1	1.2	1	0	0	1	1	1	1	Rubredoxin
zf-C2H2_4	PF13894.1	gi|332797341|ref|YP_004458841.1|	-	0.0095	16.2	6.1	0.087	13.1	0.2	2.5	2	1	0	2	2	2	1	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|332797341|ref|YP_004458841.1|	-	0.01	15.9	2.8	0.024	14.7	1.9	1.6	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2_2	PF12756.2	gi|332797341|ref|YP_004458841.1|	-	0.015	15.4	2.8	0.071	13.2	0.5	2.0	1	1	1	2	2	2	0	C2H2	type	zinc-finger	(2	copies)
zf-met	PF12874.2	gi|332797341|ref|YP_004458841.1|	-	0.051	13.8	3.7	0.2	11.9	0.2	2.4	2	0	0	2	2	2	0	Zinc-finger	of	C2H2	type
zf-C2HC_2	PF13913.1	gi|332797341|ref|YP_004458841.1|	-	0.11	12.1	1.5	4.3	7.1	0.0	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Desulfoferrod_N	PF06397.7	gi|332797341|ref|YP_004458841.1|	-	0.2	11.0	1.8	0.77	9.2	0.1	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
Endonuclease_7	PF02945.10	gi|332797341|ref|YP_004458841.1|	-	0.22	11.2	1.4	0.33	10.6	0.1	1.8	1	1	1	2	2	2	0	Recombination	endonuclease	VII
C1_2	PF03107.11	gi|332797341|ref|YP_004458841.1|	-	0.26	11.4	1.9	2.6	8.2	0.1	2.1	2	0	0	2	2	2	0	C1	domain
zinc_ribbon_4	PF13717.1	gi|332797341|ref|YP_004458841.1|	-	0.46	10.2	2.5	1.7	8.3	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332797341|ref|YP_004458841.1|	-	0.68	9.5	3.0	2.3	7.8	0.1	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|332797341|ref|YP_004458841.1|	-	0.7	9.6	3.2	1.9	8.2	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-XS	PF03470.9	gi|332797341|ref|YP_004458841.1|	-	0.84	9.7	3.1	0.8	9.8	0.3	2.0	2	0	0	2	2	2	0	XS	zinc	finger	domain
DUF488	PF04343.8	gi|332797342|ref|YP_004458842.1|	-	1.3e-28	99.7	0.2	1.6e-28	99.5	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
HTH_10	PF04967.7	gi|332797343|ref|YP_004458843.1|	-	7.4e-21	73.4	0.1	1.3e-20	72.6	0.1	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|332797343|ref|YP_004458843.1|	-	3.1e-08	32.7	0.3	6.6e-08	31.7	0.2	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|332797343|ref|YP_004458843.1|	-	3.5e-05	23.1	1.4	0.00026	20.3	0.1	2.8	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_26	PF13443.1	gi|332797343|ref|YP_004458843.1|	-	0.00028	21.0	0.1	0.0022	18.1	0.0	2.4	2	0	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_23	PF13384.1	gi|332797343|ref|YP_004458843.1|	-	0.0014	18.1	0.0	0.0034	17.0	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_27	PF13463.1	gi|332797343|ref|YP_004458843.1|	-	0.0014	18.8	0.0	0.0038	17.5	0.0	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
GerE	PF00196.14	gi|332797343|ref|YP_004458843.1|	-	0.0015	17.7	0.4	0.015	14.5	0.0	2.6	2	1	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
HTH_3	PF01381.17	gi|332797343|ref|YP_004458843.1|	-	0.0027	17.5	0.0	0.0058	16.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_37	PF13744.1	gi|332797343|ref|YP_004458843.1|	-	0.0061	16.3	0.0	0.014	15.1	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|332797343|ref|YP_004458843.1|	-	0.013	15.1	0.0	0.03	13.9	0.0	1.6	1	0	0	1	1	1	0	MarR	family
EAP30	PF04157.11	gi|332797343|ref|YP_004458843.1|	-	0.015	14.4	0.1	0.021	13.9	0.1	1.3	1	1	0	1	1	1	0	EAP30/Vps36	family
MarR	PF01047.17	gi|332797343|ref|YP_004458843.1|	-	0.022	14.4	0.1	0.093	12.4	0.0	2.2	2	1	0	2	2	2	0	MarR	family
HTH_AsnC-type	PF13404.1	gi|332797343|ref|YP_004458843.1|	-	0.026	14.0	0.1	1	8.9	0.0	2.4	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
RPA_C	PF08784.6	gi|332797343|ref|YP_004458843.1|	-	0.027	14.8	0.0	0.057	13.8	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_19	PF12844.2	gi|332797343|ref|YP_004458843.1|	-	0.027	14.5	0.1	0.13	12.3	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|332797343|ref|YP_004458843.1|	-	0.062	12.9	0.0	0.26	10.9	0.0	2.2	1	0	0	1	1	1	0	HTH	domain
HTH_25	PF13413.1	gi|332797343|ref|YP_004458843.1|	-	0.07	12.7	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|332797343|ref|YP_004458843.1|	-	0.095	12.9	0.0	0.18	12.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|332797343|ref|YP_004458843.1|	-	0.098	12.6	0.0	0.26	11.3	0.0	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|332797343|ref|YP_004458843.1|	-	0.099	12.2	0.0	0.23	11.0	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_psq	PF05225.11	gi|332797343|ref|YP_004458843.1|	-	0.11	12.0	0.0	0.19	11.2	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_20	PF12840.2	gi|332797343|ref|YP_004458843.1|	-	0.12	12.1	0.0	0.31	10.8	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|332797343|ref|YP_004458843.1|	-	0.13	11.7	2.0	0.87	9.0	0.3	2.7	2	1	0	2	2	2	0	Sigma-70,	region	4
Phage_Gp111	PF07410.6	gi|332797343|ref|YP_004458843.1|	-	0.14	12.2	0.8	5.8	7.1	0.1	2.3	1	1	1	2	2	2	0	Streptococcus	thermophilus	bacteriophage	Gp111	protein
CBS	PF00571.23	gi|332797345|ref|YP_004458845.1|	-	2.4e-40	136.0	7.6	6.4e-12	45.0	0.2	5.2	4	1	0	4	4	4	4	CBS	domain
AsnC_trans_reg	PF01037.16	gi|332797345|ref|YP_004458845.1|	-	1.1e-08	34.5	0.1	2.2e-08	33.6	0.0	1.5	1	0	0	1	1	1	1	AsnC	family
PQQ_2	PF13360.1	gi|332797346|ref|YP_004458846.1|	-	2.9e-27	95.6	0.1	7.4e-13	48.5	0.0	3.6	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|332797346|ref|YP_004458846.1|	-	6.7e-22	75.8	12.3	0.0026	17.2	0.0	7.6	7	0	0	7	7	7	7	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|332797346|ref|YP_004458846.1|	-	1.4e-11	44.2	17.5	0.0065	16.7	0.0	7.3	9	1	0	9	9	9	4	PQQ-like	domain
PaREP1	PF05942.6	gi|332797347|ref|YP_004458847.1|	-	1.5e-25	89.2	0.2	1.7e-25	89.1	0.1	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332797347|ref|YP_004458847.1|	-	0.025	14.4	0.6	0.051	13.4	0.4	1.6	1	1	0	1	1	1	0	HEPN	domain
DUF4332	PF14229.1	gi|332797347|ref|YP_004458847.1|	-	0.076	12.9	0.1	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4332)
DUF1690	PF07956.6	gi|332797348|ref|YP_004458848.1|	-	0.024	14.5	0.5	0.027	14.4	0.4	1.1	1	0	0	1	1	1	0	Protein	of	Unknown	function	(DUF1690)
NUFIP1	PF10453.4	gi|332797348|ref|YP_004458848.1|	-	0.43	10.1	4.3	4	7.0	3.0	2.1	1	1	0	1	1	1	0	Nuclear	fragile	X	mental	retardation-interacting	protein	1	(NUFIP1)
PIN	PF01850.16	gi|332797349|ref|YP_004458849.1|	-	8.3e-11	42.2	2.3	1e-10	42.0	1.6	1.0	1	0	0	1	1	1	1	PIN	domain
DUF2704	PF10866.3	gi|332797349|ref|YP_004458849.1|	-	0.059	12.7	0.6	0.17	11.2	0.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2704)
DUF4064	PF13273.1	gi|332797350|ref|YP_004458850.1|	-	0.0077	16.3	11.4	0.15	12.1	6.1	2.8	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF4064)
ABC2_membrane_4	PF12730.2	gi|332797350|ref|YP_004458850.1|	-	0.08	12.0	3.4	0.069	12.3	1.7	1.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Ytp1	PF10355.4	gi|332797350|ref|YP_004458850.1|	-	0.1	11.7	0.3	0.12	11.5	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(Ytp1)
DUF2976	PF11190.3	gi|332797350|ref|YP_004458850.1|	-	0.14	11.6	0.3	0.14	11.6	0.2	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2976)
Grp1_Fun34_YaaH	PF01184.14	gi|332797350|ref|YP_004458850.1|	-	1	8.6	5.7	4.4	6.5	0.1	2.5	1	1	2	3	3	3	0	GPR1/FUN34/yaaH	family
Tetraspannin	PF00335.15	gi|332797350|ref|YP_004458850.1|	-	1.1	8.4	6.1	0.78	8.9	3.5	1.3	1	1	0	1	1	1	0	Tetraspanin	family
LAB_N	PF07578.6	gi|332797350|ref|YP_004458850.1|	-	2	8.4	5.0	24	4.9	0.1	2.8	1	1	2	3	3	3	0	Lipid	A	Biosynthesis	N-terminal	domain
CD20	PF04103.10	gi|332797350|ref|YP_004458850.1|	-	2.9	7.8	6.7	0.43	10.5	1.8	1.7	2	0	0	2	2	2	0	CD20-like	family
Linocin_M18	PF04454.7	gi|332797352|ref|YP_004458852.1|	-	3.1e-29	101.6	0.2	4e-29	101.2	0.1	1.1	1	0	0	1	1	1	1	Encapsulating	protein	for	peroxidase
Rubrerythrin	PF02915.12	gi|332797352|ref|YP_004458852.1|	-	0.012	15.8	2.5	0.031	14.6	1.4	2.0	1	1	0	1	1	1	0	Rubrerythrin
Glyco_hydro_4C	PF11975.3	gi|332797352|ref|YP_004458852.1|	-	0.34	10.6	3.0	0.71	9.6	2.1	1.5	1	1	0	1	1	1	0	Family	4	glycosyl	hydrolase	C-terminal	domain
Nitroreductase	PF00881.19	gi|332797353|ref|YP_004458853.1|	-	8.2e-16	58.2	0.0	9.9e-16	58.0	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
DUF2537	PF10801.3	gi|332797353|ref|YP_004458853.1|	-	0.08	13.0	0.2	0.11	12.5	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2537)
Peptidase_M23	PF01551.17	gi|332797354|ref|YP_004458854.1|	-	0.0013	18.7	0.0	0.0041	17.1	0.0	1.8	2	0	0	2	2	2	1	Peptidase	family	M23
Radical_SAM	PF04055.16	gi|332797355|ref|YP_004458855.1|	-	1.9e-12	47.6	0.2	1.9e-12	47.6	0.2	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332797355|ref|YP_004458855.1|	-	0.014	15.4	0.0	0.037	14.1	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
HMGL-like	PF00682.14	gi|332797355|ref|YP_004458855.1|	-	0.05	13.2	0.0	0.08	12.5	0.0	1.3	1	0	0	1	1	1	0	HMGL-like
Toxin_42	PF15522.1	gi|332797355|ref|YP_004458855.1|	-	0.16	11.1	0.0	0.24	10.5	0.0	1.2	1	0	0	1	1	1	0	Putative	toxin	42
Radical_SAM	PF04055.16	gi|332797356|ref|YP_004458856.1|	-	1.6e-07	31.6	0.1	4.4e-07	30.2	0.1	1.7	1	1	1	2	2	2	1	Radical	SAM	superfamily
BPL_LplA_LipB	PF03099.14	gi|332797357|ref|YP_004458857.1|	-	7.1e-11	42.2	0.2	1.6e-10	41.0	0.1	1.6	1	1	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|332797357|ref|YP_004458857.1|	-	0.075	12.7	2.0	0.83	9.3	0.0	2.8	3	0	0	3	3	3	0	Bacterial	lipoate	protein	ligase	C-terminus
GCV_H	PF01597.14	gi|332797359|ref|YP_004458859.1|	-	7.8e-32	109.5	1.8	9.1e-32	109.3	1.3	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|332797359|ref|YP_004458859.1|	-	0.012	15.2	0.2	0.02	14.5	0.1	1.3	1	0	0	1	1	1	0	Biotin-requiring	enzyme
DnaJ	PF00226.26	gi|332797359|ref|YP_004458859.1|	-	0.097	12.4	0.0	0.15	11.8	0.0	1.4	1	0	0	1	1	1	0	DnaJ	domain
BPL_LplA_LipB	PF03099.14	gi|332797360|ref|YP_004458860.1|	-	2.2e-09	37.3	0.0	4e-09	36.5	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|332797360|ref|YP_004458860.1|	-	0.00017	21.1	0.6	0.00054	19.5	0.3	1.9	1	1	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
GCV_H	PF01597.14	gi|332797361|ref|YP_004458861.1|	-	1.1e-40	138.0	0.7	1.5e-40	137.6	0.5	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|332797361|ref|YP_004458861.1|	-	5.5e-06	25.9	1.3	9.3e-06	25.1	0.9	1.4	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|332797361|ref|YP_004458861.1|	-	0.0024	17.5	0.1	0.004	16.8	0.1	1.4	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
CBS	PF00571.23	gi|332797362|ref|YP_004458862.1|	-	3.1e-12	46.0	0.0	0.00012	21.7	0.0	3.0	3	0	0	3	3	3	2	CBS	domain
DUF3871	PF12987.2	gi|332797363|ref|YP_004458863.1|	-	0.068	11.8	0.1	0.089	11.4	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3871)
GnsAB	PF08178.6	gi|332797363|ref|YP_004458863.1|	-	0.1	12.2	2.1	0.16	11.6	0.1	2.1	2	0	0	2	2	2	0	GnsA/GnsB	family
OsmC	PF02566.14	gi|332797364|ref|YP_004458864.1|	-	2.1e-19	69.5	0.0	2.7e-19	69.2	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
NAGLU_C	PF12972.2	gi|332797365|ref|YP_004458865.1|	-	0.13	11.5	0.5	7.9	5.7	0.0	2.0	1	1	1	2	2	2	0	Alpha-N-acetylglucosaminidase	(NAGLU)	C-terminal	domain
CCG	PF02754.11	gi|332797366|ref|YP_004458866.1|	-	1.4e-28	98.6	0.0	8.1e-15	54.6	0.0	2.4	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|332797367|ref|YP_004458867.1|	-	1.7e-10	40.7	7.2	2.6e-10	40.1	5.0	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332797367|ref|YP_004458867.1|	-	1.8e-09	37.7	4.5	3e-09	37.1	3.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797367|ref|YP_004458867.1|	-	3.7e-08	33.4	6.4	7.4e-08	32.5	4.5	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797367|ref|YP_004458867.1|	-	1.3e-05	25.4	7.0	2.4e-05	24.6	4.9	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332797367|ref|YP_004458867.1|	-	0.00033	21.3	3.4	0.017	15.8	0.4	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|332797367|ref|YP_004458867.1|	-	0.00036	20.2	11.6	0.0024	17.6	8.6	1.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797367|ref|YP_004458867.1|	-	0.0023	17.7	9.7	0.19	11.7	1.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332797367|ref|YP_004458867.1|	-	0.0025	18.2	1.5	0.0025	18.2	1.0	2.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332797367|ref|YP_004458867.1|	-	0.0051	16.6	7.8	0.019	14.8	5.4	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|332797367|ref|YP_004458867.1|	-	0.021	14.4	0.5	0.021	14.4	0.4	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_4	PF12800.2	gi|332797367|ref|YP_004458867.1|	-	0.023	14.9	12.6	0.53	10.7	1.5	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|332797367|ref|YP_004458867.1|	-	0.29	10.8	13.6	0.42	10.2	2.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
IZUMO	PF15005.1	gi|332797367|ref|YP_004458867.1|	-	1	9.4	5.0	1.6	8.7	0.5	2.3	2	0	0	2	2	2	0	Izumo	sperm-egg	fusion
DUF2481	PF10654.4	gi|332797368|ref|YP_004458868.1|	-	0.059	13.0	0.2	0.46	10.1	0.0	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2481)
DUF3725	PF12523.3	gi|332797368|ref|YP_004458868.1|	-	0.074	13.1	0.0	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3725)
Pyr_redox_2	PF07992.9	gi|332797369|ref|YP_004458869.1|	-	7e-13	48.9	0.0	1.1e-12	48.2	0.0	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|332797369|ref|YP_004458869.1|	-	9.4e-08	31.4	0.1	2.1e-07	30.3	0.1	1.5	1	0	0	1	1	1	1	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|332797369|ref|YP_004458869.1|	-	6.4e-07	28.5	0.0	2.4e-06	26.6	0.0	1.8	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|332797369|ref|YP_004458869.1|	-	5.5e-06	26.3	0.0	1.2e-05	25.2	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|332797369|ref|YP_004458869.1|	-	1.6e-05	25.0	0.1	0.0016	18.5	0.0	2.2	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332797369|ref|YP_004458869.1|	-	4e-05	22.2	0.1	0.0013	17.2	0.1	2.1	1	1	1	2	2	2	1	HI0933-like	protein
Amino_oxidase	PF01593.19	gi|332797369|ref|YP_004458869.1|	-	4.1e-05	22.8	0.0	0.021	13.8	0.0	2.5	3	0	0	3	3	3	2	Flavin	containing	amine	oxidoreductase
GIDA	PF01134.17	gi|332797369|ref|YP_004458869.1|	-	6.7e-05	21.9	0.0	0.024	13.4	0.0	2.3	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|332797369|ref|YP_004458869.1|	-	0.0001	21.5	0.0	0.00019	20.6	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|332797369|ref|YP_004458869.1|	-	0.00018	20.5	0.2	0.00096	18.1	0.0	2.1	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|332797369|ref|YP_004458869.1|	-	0.00062	18.9	0.1	0.0011	18.1	0.0	1.3	1	0	0	1	1	1	1	Thi4	family
NAD_binding_7	PF13241.1	gi|332797369|ref|YP_004458869.1|	-	0.001	19.3	0.0	0.002	18.3	0.0	1.6	1	0	0	1	1	1	1	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|332797369|ref|YP_004458869.1|	-	0.0016	18.0	0.3	0.057	12.9	0.1	2.5	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox	PF00070.22	gi|332797369|ref|YP_004458869.1|	-	0.0036	17.6	0.2	0.011	16.1	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|332797369|ref|YP_004458869.1|	-	0.011	15.5	0.0	0.21	11.3	0.0	2.8	4	0	0	4	4	4	0	FAD-NAD(P)-binding
CPSase_L_chain	PF00289.17	gi|332797369|ref|YP_004458869.1|	-	0.014	15.4	0.0	0.03	14.4	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
CCG	PF02754.11	gi|332797370|ref|YP_004458870.1|	-	1.9e-09	37.4	0.0	4.8e-07	29.6	0.0	3.7	4	1	0	4	4	4	1	Cysteine-rich	domain
HNH	PF01844.18	gi|332797370|ref|YP_004458870.1|	-	0.056	13.3	0.3	2.9	7.8	0.0	2.9	3	0	0	3	3	3	0	HNH	endonuclease
Fer4_8	PF13183.1	gi|332797371|ref|YP_004458871.1|	-	3.3e-10	39.8	6.7	6e-10	39.0	4.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332797371|ref|YP_004458871.1|	-	1.5e-08	34.8	7.2	1.5e-08	34.8	5.0	1.6	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|332797371|ref|YP_004458871.1|	-	5.7e-06	26.6	2.0	0.1	13.0	0.3	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797371|ref|YP_004458871.1|	-	6e-06	26.4	8.7	1.3e-05	25.3	6.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332797371|ref|YP_004458871.1|	-	7.2e-06	25.7	7.8	1.5e-05	24.6	5.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797371|ref|YP_004458871.1|	-	2.7e-05	23.8	8.2	0.0077	16.0	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|332797371|ref|YP_004458871.1|	-	0.00037	20.8	9.7	0.0024	18.2	7.3	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|332797371|ref|YP_004458871.1|	-	0.0014	18.7	11.1	0.0023	18.1	0.8	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|332797371|ref|YP_004458871.1|	-	0.0064	16.0	4.9	0.043	13.4	0.3	2.3	1	1	1	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_21	PF14697.1	gi|332797371|ref|YP_004458871.1|	-	0.0073	16.1	7.8	0.04	13.7	5.5	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332797371|ref|YP_004458871.1|	-	0.03	15.0	10.7	0.17	12.6	7.5	2.2	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
DUF3106	PF11304.3	gi|332797371|ref|YP_004458871.1|	-	0.06	13.7	0.3	1.4	9.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3106)
Fer4	PF00037.22	gi|332797371|ref|YP_004458871.1|	-	0.26	10.9	16.9	0.12	12.0	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|332797371|ref|YP_004458871.1|	-	0.49	10.3	13.0	2.5	8.1	1.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
TusA	PF01206.12	gi|332797372|ref|YP_004458872.1|	-	1.7e-23	81.9	0.0	2e-23	81.7	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DrsE_2	PF13686.1	gi|332797373|ref|YP_004458873.1|	-	5.5e-26	91.1	0.6	1.7e-25	89.5	0.4	1.6	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|332797373|ref|YP_004458873.1|	-	1.3e-06	28.4	0.0	3e-06	27.2	0.0	1.5	1	1	0	1	1	1	1	DsrE/DsrF-like	family
Band_7_1	PF13421.1	gi|332797373|ref|YP_004458873.1|	-	0.08	12.4	0.0	0.094	12.2	0.0	1.2	1	0	0	1	1	1	0	SPFH	domain-Band	7	family
DrsE	PF02635.10	gi|332797374|ref|YP_004458874.1|	-	3.3e-18	65.9	0.0	3.6e-18	65.7	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|332797374|ref|YP_004458874.1|	-	8.8e-15	54.7	0.7	8.7e-07	28.8	0.1	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
Pyr_redox_2	PF07992.9	gi|332797375|ref|YP_004458875.1|	-	5e-30	104.8	11.3	1.5e-19	70.6	0.2	4.0	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332797375|ref|YP_004458875.1|	-	2.2e-18	66.4	14.6	3.9e-17	62.4	0.8	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|332797375|ref|YP_004458875.1|	-	6.3e-17	61.5	0.1	1.6e-16	60.2	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|332797375|ref|YP_004458875.1|	-	5.4e-11	42.9	0.0	4.3e-10	40.0	0.0	2.2	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797375|ref|YP_004458875.1|	-	6.1e-10	38.5	11.5	0.00014	20.8	0.6	4.1	2	2	2	4	4	4	2	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|332797375|ref|YP_004458875.1|	-	1.1e-06	27.7	14.9	0.081	11.8	1.0	4.0	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|332797375|ref|YP_004458875.1|	-	6.2e-06	25.5	1.9	0.0028	16.7	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|332797375|ref|YP_004458875.1|	-	1.6e-05	23.5	9.2	0.0073	14.8	1.5	3.8	4	0	0	4	4	4	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332797375|ref|YP_004458875.1|	-	2.4e-05	23.5	4.2	0.0043	16.1	0.9	2.2	2	0	0	2	2	2	2	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|332797375|ref|YP_004458875.1|	-	0.0001	21.3	9.1	0.00083	18.3	1.5	2.6	2	0	0	2	2	2	2	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|332797375|ref|YP_004458875.1|	-	0.00013	21.5	3.6	0.0023	17.5	0.0	2.6	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Trp_halogenase	PF04820.9	gi|332797375|ref|YP_004458875.1|	-	0.00017	20.3	5.5	0.00049	18.8	0.4	2.2	2	0	0	2	2	2	1	Tryptophan	halogenase
K_oxygenase	PF13434.1	gi|332797375|ref|YP_004458875.1|	-	0.00026	20.0	0.0	0.0078	15.1	0.0	2.2	1	1	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_8	PF13450.1	gi|332797375|ref|YP_004458875.1|	-	0.00097	19.1	9.4	0.0071	16.3	1.5	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
NAD_binding_7	PF13241.1	gi|332797375|ref|YP_004458875.1|	-	0.0025	18.0	0.9	2.5	8.4	0.0	3.3	3	0	0	3	3	3	1	Putative	NAD(P)-binding
NAD_Gly3P_dh_N	PF01210.18	gi|332797375|ref|YP_004458875.1|	-	0.004	16.9	1.1	1.9	8.2	0.0	2.7	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|332797375|ref|YP_004458875.1|	-	0.0087	15.5	5.9	6.1	6.2	0.0	3.6	4	0	0	4	4	4	1	Ketopantoate	reductase	PanE/ApbA
Thi4	PF01946.12	gi|332797375|ref|YP_004458875.1|	-	0.022	13.8	11.1	0.15	11.0	1.2	3.6	4	0	0	4	4	4	0	Thi4	family
NAD_binding_9	PF13454.1	gi|332797375|ref|YP_004458875.1|	-	0.024	14.4	2.2	5.2	6.8	0.1	3.5	2	2	1	3	3	3	0	FAD-NAD(P)-binding
Inhibitor_I24	PF10465.4	gi|332797375|ref|YP_004458875.1|	-	0.03	14.0	0.8	0.66	9.7	0.1	2.5	2	0	0	2	2	2	0	PinA	peptidase	inhibitor
Lycopene_cycl	PF05834.7	gi|332797375|ref|YP_004458875.1|	-	0.043	12.7	2.9	0.81	8.5	0.0	2.9	3	0	0	3	3	3	0	Lycopene	cyclase	protein
3HCDH_N	PF02737.13	gi|332797375|ref|YP_004458875.1|	-	0.049	13.2	0.1	0.049	13.2	0.0	2.6	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|332797375|ref|YP_004458875.1|	-	0.56	9.5	6.2	2.4	7.5	0.1	2.4	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
TrkA_N	PF02254.13	gi|332797375|ref|YP_004458875.1|	-	3.3	7.7	9.5	8.4	6.4	0.7	3.5	3	0	0	3	3	3	0	TrkA-N	domain
Thioredoxin_3	PF13192.1	gi|332797377|ref|YP_004458877.1|	-	5.6e-11	42.0	0.4	1.7e-10	40.5	0.1	1.8	2	0	0	2	2	2	1	Thioredoxin	domain
Glutaredoxin	PF00462.19	gi|332797377|ref|YP_004458877.1|	-	0.0019	18.1	0.8	0.0047	16.8	0.2	1.9	2	0	0	2	2	2	1	Glutaredoxin
Thioredoxin	PF00085.15	gi|332797377|ref|YP_004458877.1|	-	0.0019	17.8	0.4	0.0064	16.1	0.1	1.9	2	1	0	2	2	2	1	Thioredoxin
DUF836	PF05768.9	gi|332797377|ref|YP_004458877.1|	-	0.035	14.3	0.1	0.083	13.1	0.1	1.7	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_9	PF14595.1	gi|332797377|ref|YP_004458877.1|	-	0.088	12.3	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin
UPF0278	PF08745.6	gi|332797378|ref|YP_004458878.1|	-	0.0012	18.1	0.5	0.0041	16.3	0.1	1.8	2	1	0	2	2	2	1	UPF0278	family
DUF150	PF02576.12	gi|332797378|ref|YP_004458878.1|	-	0.0079	15.7	0.0	0.0092	15.5	0.0	1.2	1	1	0	1	1	1	1	Uncharacterised	BCR,	YhbC	family	COG0779
GSIII_N	PF12437.3	gi|332797378|ref|YP_004458878.1|	-	0.072	12.4	0.0	0.095	12.0	0.0	1.5	1	1	0	1	1	1	0	Glutamine	synthetase	type	III	N	terminal
Hist_deacetyl	PF00850.14	gi|332797379|ref|YP_004458879.1|	-	3.8e-63	213.6	0.0	4.8e-63	213.3	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
TusA	PF01206.12	gi|332797380|ref|YP_004458880.1|	-	1.6e-14	53.2	0.2	2e-14	52.9	0.2	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF4065	PF13274.1	gi|332797381|ref|YP_004458881.1|	-	0.0074	16.9	0.0	0.0091	16.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
RNaseH_C	PF09293.5	gi|332797381|ref|YP_004458881.1|	-	0.048	13.5	0.2	0.059	13.2	0.1	1.1	1	0	0	1	1	1	0	T4	RNase	H,	C	terminal
DUF1886	PF09171.5	gi|332797381|ref|YP_004458881.1|	-	0.074	12.0	0.4	0.085	11.8	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1886)
YHS	PF04945.8	gi|332797382|ref|YP_004458882.1|	-	1.1e-08	34.7	0.5	1.4e-08	34.4	0.3	1.2	1	0	0	1	1	1	1	YHS	domain
zf-C2HC_2	PF13913.1	gi|332797382|ref|YP_004458882.1|	-	0.23	11.1	0.1	0.23	11.1	0.1	2.2	4	0	0	4	4	4	0	zinc-finger	of	a	C2HC-type
zf-Mss51	PF13824.1	gi|332797382|ref|YP_004458882.1|	-	0.73	9.7	2.5	6.8	6.6	1.7	2.1	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
UPF0066	PF01980.11	gi|332797383|ref|YP_004458883.1|	-	3e-38	130.4	0.0	3.9e-38	130.0	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
Pyr_redox_2	PF07992.9	gi|332797386|ref|YP_004458886.1|	-	3.2e-35	121.8	3.9	1.7e-33	116.1	2.7	3.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|332797386|ref|YP_004458886.1|	-	2.5e-23	82.1	0.2	5.3e-23	81.1	0.2	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|332797386|ref|YP_004458886.1|	-	1.1e-12	48.1	0.7	1.1e-12	48.1	0.5	2.4	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332797386|ref|YP_004458886.1|	-	1.8e-07	31.4	0.5	0.014	15.5	0.0	3.1	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797386|ref|YP_004458886.1|	-	3.2e-06	26.2	10.1	0.013	14.3	0.2	4.0	3	1	1	4	4	4	3	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|332797386|ref|YP_004458886.1|	-	4.7e-06	25.7	0.3	0.0038	16.1	0.0	2.3	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|332797386|ref|YP_004458886.1|	-	3.7e-05	22.3	2.2	0.0033	15.9	0.0	2.6	2	1	1	3	3	3	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|332797386|ref|YP_004458886.1|	-	0.006	15.4	2.9	1.3	7.8	0.0	2.5	3	0	0	3	3	3	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|332797386|ref|YP_004458886.1|	-	0.14	11.1	0.0	1.1	8.2	0.0	2.1	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Antitoxin-MazE	PF04014.13	gi|332797387|ref|YP_004458887.1|	-	2.4e-14	52.6	0.6	4e-14	51.9	0.4	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
CDC48_N	PF02359.13	gi|332797387|ref|YP_004458887.1|	-	0.00046	20.0	0.3	0.024	14.5	0.2	2.1	1	1	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
Imm45	PF15603.1	gi|332797387|ref|YP_004458887.1|	-	0.0083	16.2	0.8	0.0095	16.0	0.6	1.1	1	0	0	1	1	1	1	Immunity	protein	45
DUF1905	PF08922.6	gi|332797387|ref|YP_004458887.1|	-	0.013	15.0	0.1	0.038	13.5	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
eIF-1a	PF01176.14	gi|332797387|ref|YP_004458887.1|	-	0.082	12.3	0.1	0.12	11.7	0.1	1.3	1	0	0	1	1	1	0	Translation	initiation	factor	1A	/	IF-1
YjbR	PF04237.8	gi|332797387|ref|YP_004458887.1|	-	0.12	12.7	0.0	0.13	12.6	0.0	1.2	1	0	0	1	1	1	0	YjbR
PIN	PF01850.16	gi|332797388|ref|YP_004458888.1|	-	1.3e-08	35.1	0.2	1.5e-08	35.0	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
ADH_N	PF08240.7	gi|332797389|ref|YP_004458889.1|	-	4.5e-27	93.9	2.0	7.8e-27	93.1	0.0	2.3	3	1	0	3	3	3	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|332797389|ref|YP_004458889.1|	-	1.6e-23	82.6	1.6	3.4e-23	81.6	0.3	2.0	2	1	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|332797389|ref|YP_004458889.1|	-	6.5e-05	23.8	0.0	0.00013	22.8	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|332797389|ref|YP_004458889.1|	-	0.00023	20.7	0.2	0.00058	19.4	0.1	1.7	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_10	PF13460.1	gi|332797389|ref|YP_004458889.1|	-	0.003	17.6	0.3	0.0043	17.0	0.2	1.3	1	0	0	1	1	1	1	NADH(P)-binding
ELFV_dehydrog	PF00208.16	gi|332797389|ref|YP_004458889.1|	-	0.0082	15.7	0.2	0.013	15.0	0.1	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Rhodanese	PF00581.15	gi|332797389|ref|YP_004458889.1|	-	0.02	15.2	0.0	0.85	9.9	0.0	2.4	2	0	0	2	2	2	0	Rhodanese-like	domain
SIS_2	PF13580.1	gi|332797389|ref|YP_004458889.1|	-	0.023	14.4	0.8	0.066	12.9	0.2	2.1	2	1	0	2	2	2	0	SIS	domain
PALP	PF00291.20	gi|332797389|ref|YP_004458889.1|	-	0.078	12.1	0.1	0.56	9.3	0.4	2.0	2	0	0	2	2	2	0	Pyridoxal-phosphate	dependent	enzyme
BetaGal_dom2	PF10435.4	gi|332797389|ref|YP_004458889.1|	-	0.092	12.0	0.4	0.14	11.4	0.3	1.2	1	0	0	1	1	1	0	Beta-galactosidase,	domain	2
FdhD-NarQ	PF02634.10	gi|332797390|ref|YP_004458890.1|	-	1.7e-71	240.4	0.0	2e-71	240.2	0.0	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
DNA_pol3_beta	PF00712.14	gi|332797390|ref|YP_004458890.1|	-	0.087	12.7	0.1	0.43	10.4	0.0	2.1	2	0	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
DUF1641	PF07849.6	gi|332797391|ref|YP_004458891.1|	-	1.2e-11	43.9	0.1	2.1e-11	43.2	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
Spc7	PF08317.6	gi|332797391|ref|YP_004458891.1|	-	0.061	11.9	0.9	0.22	10.1	0.1	1.9	2	0	0	2	2	2	0	Spc7	kinetochore	protein
NIL	PF09383.5	gi|332797391|ref|YP_004458891.1|	-	0.079	12.5	0.1	0.38	10.3	0.0	2.1	1	1	2	3	3	3	0	NIL	domain
Npa1	PF11707.3	gi|332797391|ref|YP_004458891.1|	-	0.11	11.4	0.1	0.46	9.4	0.1	1.7	1	1	1	2	2	2	0	Ribosome	60S	biogenesis	N-terminal
Molybdopterin	PF00384.17	gi|332797392|ref|YP_004458892.1|	-	4.9e-88	295.7	0.0	6.3e-88	295.3	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|332797392|ref|YP_004458892.1|	-	4e-22	78.1	0.0	1.7e-21	76.1	0.0	2.0	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|332797392|ref|YP_004458892.1|	-	9.6e-18	63.7	0.4	9.6e-18	63.7	0.3	2.2	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2_4	PF13510.1	gi|332797392|ref|YP_004458892.1|	-	1.1e-16	60.3	0.1	2.5e-16	59.2	0.0	1.6	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
NADH-G_4Fe-4S_3	PF10588.4	gi|332797392|ref|YP_004458892.1|	-	2.2e-11	42.8	0.3	2.2e-11	42.8	0.2	2.1	2	0	0	2	2	1	1	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
Fer4	PF00037.22	gi|332797392|ref|YP_004458892.1|	-	5.7e-11	41.5	18.9	3.7e-06	26.3	2.4	3.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|332797392|ref|YP_004458892.1|	-	7.9e-08	32.0	6.0	7.9e-08	32.0	4.2	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797392|ref|YP_004458892.1|	-	3e-07	30.7	9.6	3e-07	30.7	6.7	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332797392|ref|YP_004458892.1|	-	5.7e-07	29.1	19.7	0.00028	20.6	2.1	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|332797392|ref|YP_004458892.1|	-	3.5e-06	27.1	9.7	3.5e-06	27.1	6.7	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332797392|ref|YP_004458892.1|	-	4.2e-06	26.6	8.1	4.2e-06	26.6	5.6	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332797392|ref|YP_004458892.1|	-	5.4e-06	26.1	11.7	5.4e-06	26.1	8.1	2.8	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
TPP_enzyme_M	PF00205.17	gi|332797392|ref|YP_004458892.1|	-	1.3e-05	25.0	0.2	0.7	9.6	0.0	3.6	4	0	0	4	4	3	2	Thiamine	pyrophosphate	enzyme,	central	domain
Fer2	PF00111.22	gi|332797392|ref|YP_004458892.1|	-	1.7e-05	24.4	3.5	3.7e-05	23.3	0.1	2.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_16	PF13484.1	gi|332797392|ref|YP_004458892.1|	-	2.2e-05	25.0	10.7	0.0055	17.4	2.2	3.6	3	1	0	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|332797392|ref|YP_004458892.1|	-	4.9e-05	22.9	11.0	0.00096	18.9	1.0	3.4	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332797392|ref|YP_004458892.1|	-	0.0021	18.3	14.9	0.35	11.2	1.9	3.0	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|332797392|ref|YP_004458892.1|	-	0.0024	18.4	5.8	0.26	11.8	1.2	2.9	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|332797392|ref|YP_004458892.1|	-	0.0024	18.2	1.0	0.0024	18.2	0.7	3.2	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332797392|ref|YP_004458892.1|	-	0.0056	17.0	6.2	1.1	9.6	0.1	2.7	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|332797392|ref|YP_004458892.1|	-	0.015	15.8	26.2	0.057	14.0	5.4	3.3	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Grp1_Fun34_YaaH	PF01184.14	gi|332797393|ref|YP_004458893.1|	-	6	6.0	18.0	54	2.9	12.5	2.2	1	1	0	1	1	1	0	GPR1/FUN34/yaaH	family
Reo_sigmaC	PF04582.7	gi|332797395|ref|YP_004458895.1|	-	1e-18	67.6	30.7	2.7e-08	33.3	1.3	3.2	1	1	3	4	4	4	4	Reovirus	sigma	C	capsid	protein
DUF16	PF01519.11	gi|332797395|ref|YP_004458895.1|	-	1.3e-12	47.7	44.8	0.00012	22.2	2.1	5.5	2	1	4	6	6	5	3	Protein	of	unknown	function	DUF16
AAA_13	PF13166.1	gi|332797395|ref|YP_004458895.1|	-	5.3e-09	35.1	28.6	1.1e-08	34.0	19.7	1.6	1	1	0	1	1	1	1	AAA	domain
Fib_alpha	PF08702.5	gi|332797395|ref|YP_004458895.1|	-	5.8e-09	36.2	27.7	0.0099	16.0	2.6	5.2	1	1	4	5	5	5	2	Fibrinogen	alpha/beta	chain	family
IncA	PF04156.9	gi|332797395|ref|YP_004458895.1|	-	1.7e-08	34.2	29.3	1.6e-05	24.6	12.5	2.2	1	1	1	2	2	2	2	IncA	protein
Lebercilin	PF15619.1	gi|332797395|ref|YP_004458895.1|	-	3.5e-07	29.8	25.6	0.00081	18.8	6.4	2.3	1	1	1	2	2	2	2	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
SlyX	PF04102.7	gi|332797395|ref|YP_004458895.1|	-	4.4e-07	30.1	28.2	0.023	15.0	2.3	5.1	1	1	4	5	5	5	4	SlyX
DUF3972	PF13118.1	gi|332797395|ref|YP_004458895.1|	-	5.5e-07	29.7	29.5	0.0059	16.6	8.0	4.5	2	1	2	4	4	3	3	Protein	of	unknown	function	(DUF3972)
TMF_DNA_bd	PF12329.3	gi|332797395|ref|YP_004458895.1|	-	7.7e-07	28.8	49.5	0.0015	18.3	10.8	4.8	2	1	3	5	5	4	4	TATA	element	modulatory	factor	1	DNA	binding
ATG16	PF08614.6	gi|332797395|ref|YP_004458895.1|	-	3.5e-06	26.9	28.7	0.00036	20.4	5.7	3.3	1	1	2	3	3	3	2	Autophagy	protein	16	(ATG16)
DUF948	PF06103.6	gi|332797395|ref|YP_004458895.1|	-	3.5e-06	26.7	23.5	0.0032	17.3	3.9	3.9	2	1	3	5	5	4	3	Bacterial	protein	of	unknown	function	(DUF948)
BRO1	PF03097.13	gi|332797395|ref|YP_004458895.1|	-	6.2e-06	25.2	23.3	0.015	14.0	1.1	3.3	1	1	1	2	2	2	1	BRO1-like	domain
Atg14	PF10186.4	gi|332797395|ref|YP_004458895.1|	-	7.9e-06	25.0	30.2	0.0051	15.8	9.7	2.4	1	1	2	3	3	3	3	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
ADIP	PF11559.3	gi|332797395|ref|YP_004458895.1|	-	1.5e-05	24.9	29.9	0.041	13.7	10.3	3.0	1	1	1	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
NPV_P10	PF05531.7	gi|332797395|ref|YP_004458895.1|	-	4.4e-05	23.6	25.7	0.15	12.3	4.1	4.5	1	1	2	3	3	3	1	Nucleopolyhedrovirus	P10	protein
DUF1296	PF06972.6	gi|332797395|ref|YP_004458895.1|	-	6.2e-05	22.8	9.1	0.38	10.7	0.1	4.8	1	1	3	4	4	4	1	Protein	of	unknown	function	(DUF1296)
NEP	PF10167.4	gi|332797395|ref|YP_004458895.1|	-	6.9e-05	22.5	14.0	0.086	12.5	0.4	3.3	1	1	2	3	3	3	2	Uncharacterised	conserved	protein
IKKbetaNEMObind	PF12179.3	gi|332797395|ref|YP_004458895.1|	-	0.0001	22.0	5.3	3.9	7.3	0.1	5.3	4	1	2	6	6	5	0	I-kappa-kinase-beta	NEMO	binding	domain
DUF1664	PF07889.7	gi|332797395|ref|YP_004458895.1|	-	0.00013	21.7	25.1	0.018	14.8	4.5	3.3	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF1664)
EzrA	PF06160.7	gi|332797395|ref|YP_004458895.1|	-	0.00014	20.2	30.3	0.011	13.9	1.7	2.1	1	1	1	2	2	2	2	Septation	ring	formation	regulator,	EzrA
ALIX_LYPXL_bnd	PF13949.1	gi|332797395|ref|YP_004458895.1|	-	0.00016	20.7	26.4	0.018	13.9	12.5	3.1	1	1	1	2	2	2	2	ALIX	V-shaped	domain	binding	to	HIV
FliJ	PF02050.11	gi|332797395|ref|YP_004458895.1|	-	0.00018	21.5	30.7	0.074	13.1	6.3	4.2	1	1	3	4	4	4	1	Flagellar	FliJ	protein
Cast	PF10174.4	gi|332797395|ref|YP_004458895.1|	-	0.00026	19.2	25.7	0.0003	18.9	9.5	2.1	1	1	1	2	2	2	1	RIM-binding	protein	of	the	cytomatrix	active	zone
DUF4175	PF13779.1	gi|332797395|ref|YP_004458895.1|	-	0.00027	18.7	22.0	0.098	10.3	6.1	2.9	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF4175)
HOOK	PF05622.7	gi|332797395|ref|YP_004458895.1|	-	0.00031	18.7	26.7	0.024	12.4	8.5	2.1	1	1	1	2	2	2	2	HOOK	protein
Prefoldin	PF02996.12	gi|332797395|ref|YP_004458895.1|	-	0.00032	20.3	31.8	0.049	13.2	1.1	5.2	1	1	4	5	5	5	2	Prefoldin	subunit
TPR_14	PF13428.1	gi|332797395|ref|YP_004458895.1|	-	0.00035	20.9	1.4	26	5.8	0.0	5.8	2	1	5	7	7	4	0	Tetratricopeptide	repeat
MCPsignal	PF00015.16	gi|332797395|ref|YP_004458895.1|	-	0.00052	19.6	30.7	0.0032	17.0	11.2	2.1	1	1	1	2	2	2	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Spc7	PF08317.6	gi|332797395|ref|YP_004458895.1|	-	0.00055	18.6	32.4	0.0067	15.1	10.4	2.2	1	1	1	2	2	2	1	Spc7	kinetochore	protein
Fusion_gly	PF00523.13	gi|332797395|ref|YP_004458895.1|	-	0.0007	17.7	26.5	0.2	9.6	2.8	4.5	1	1	4	5	5	5	2	Fusion	glycoprotein	F0
CENP-Q	PF13094.1	gi|332797395|ref|YP_004458895.1|	-	0.0011	19.0	31.4	0.0044	17.0	2.1	3.7	1	1	2	3	3	3	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
AAA_27	PF13514.1	gi|332797395|ref|YP_004458895.1|	-	0.0011	16.7	25.8	0.0018	16.0	17.9	1.3	1	0	0	1	1	1	1	AAA	domain
Laminin_I	PF06008.9	gi|332797395|ref|YP_004458895.1|	-	0.0014	18.0	32.7	0.053	12.8	9.5	2.2	1	1	1	2	2	2	1	Laminin	Domain	I
TPR_MLP1_2	PF07926.7	gi|332797395|ref|YP_004458895.1|	-	0.002	17.8	34.5	0.0088	15.7	5.5	3.1	1	1	1	2	2	2	1	TPR/MLP1/MLP2-like	protein
Corona_S2	PF01601.11	gi|332797395|ref|YP_004458895.1|	-	0.0029	15.8	18.7	0.018	13.1	3.3	3.2	1	1	3	4	4	4	3	Coronavirus	S2	glycoprotein
SNARE	PF05739.14	gi|332797395|ref|YP_004458895.1|	-	0.0039	16.8	20.4	1.2	8.8	1.1	4.9	1	1	4	5	5	5	0	SNARE	domain
Myosin_tail_1	PF01576.14	gi|332797395|ref|YP_004458895.1|	-	0.0042	14.9	29.6	0.015	13.0	20.6	1.6	1	1	0	1	1	1	1	Myosin	tail
DUF2383	PF09537.5	gi|332797395|ref|YP_004458895.1|	-	0.0042	17.3	20.7	1.5	9.1	2.3	4.9	1	1	2	4	4	4	0	Domain	of	unknown	function	(DUF2383)
CK2S	PF15011.1	gi|332797395|ref|YP_004458895.1|	-	0.0046	16.7	19.5	0.2	11.4	0.8	3.1	1	1	1	3	3	3	3	Casein	Kinase	2	substrate
Dimerisation	PF08100.6	gi|332797395|ref|YP_004458895.1|	-	0.0049	16.6	4.4	0.89	9.4	0.1	3.8	1	1	2	4	4	2	1	Dimerisation	domain
Apc5	PF12862.2	gi|332797395|ref|YP_004458895.1|	-	0.0058	16.4	15.5	9.3	6.1	0.6	6.1	1	1	8	9	9	9	0	Anaphase-promoting	complex	subunit	5
Mnd1	PF03962.10	gi|332797395|ref|YP_004458895.1|	-	0.0069	16.0	26.9	0.12	11.9	9.0	2.7	1	1	1	2	2	2	2	Mnd1	family
DUF848	PF05852.6	gi|332797395|ref|YP_004458895.1|	-	0.0069	16.2	22.3	0.3	10.9	3.0	3.3	1	1	2	3	3	3	1	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
FlgN	PF05130.7	gi|332797395|ref|YP_004458895.1|	-	0.0088	16.3	32.3	0.055	13.7	4.6	2.6	1	1	2	3	3	3	2	FlgN	protein
BLOC1_2	PF10046.4	gi|332797395|ref|YP_004458895.1|	-	0.0096	16.0	27.9	0.25	11.5	5.4	3.7	1	1	2	3	3	3	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Filament	PF00038.16	gi|332797395|ref|YP_004458895.1|	-	0.011	15.2	29.8	0.64	9.4	1.4	2.9	1	1	2	3	3	3	0	Intermediate	filament	protein
DUF3818	PF12825.2	gi|332797395|ref|YP_004458895.1|	-	0.012	14.3	17.1	0.18	10.4	1.6	3.8	1	1	4	5	5	5	0	Domain	of	unknown	function	in	PX-proteins	(DUF3818)
FimP	PF09766.4	gi|332797395|ref|YP_004458895.1|	-	0.012	14.6	28.7	0.083	11.9	2.2	3.7	3	1	1	4	4	3	0	Fms-interacting	protein
Bacillus_HBL	PF05791.6	gi|332797395|ref|YP_004458895.1|	-	0.013	14.8	25.2	0.15	11.4	3.9	3.2	1	1	1	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF904	PF06005.7	gi|332797395|ref|YP_004458895.1|	-	0.014	15.6	33.7	0.31	11.3	2.4	4.8	1	1	2	3	3	2	0	Protein	of	unknown	function	(DUF904)
HAD_2	PF13419.1	gi|332797395|ref|YP_004458895.1|	-	0.014	15.6	0.5	12	6.1	0.0	3.4	2	1	1	3	3	2	0	Haloacid	dehalogenase-like	hydrolase
DUF2959	PF11172.3	gi|332797395|ref|YP_004458895.1|	-	0.017	14.8	18.1	0.062	13.0	8.3	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2959)
FliD_N	PF02465.13	gi|332797395|ref|YP_004458895.1|	-	0.019	15.2	25.6	3	8.2	5.1	4.3	1	1	2	3	3	3	0	Flagellar	hook-associated	protein	2	N-terminus
Mitofilin	PF09731.4	gi|332797395|ref|YP_004458895.1|	-	0.021	13.5	28.0	0.034	12.8	19.4	1.3	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
TPR_1	PF00515.23	gi|332797395|ref|YP_004458895.1|	-	0.021	14.4	6.8	58	3.5	0.0	6.5	5	2	2	7	7	6	0	Tetratricopeptide	repeat
DUF972	PF06156.8	gi|332797395|ref|YP_004458895.1|	-	0.022	15.0	25.9	1.5	9.2	0.5	3.7	1	1	4	5	5	5	0	Protein	of	unknown	function	(DUF972)
DUF1626	PF07788.6	gi|332797395|ref|YP_004458895.1|	-	0.024	14.4	3.2	0.029	14.1	1.3	1.9	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1626)
DUF812	PF05667.6	gi|332797395|ref|YP_004458895.1|	-	0.029	12.9	31.6	0.33	9.4	7.6	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF812)
APG17	PF04108.7	gi|332797395|ref|YP_004458895.1|	-	0.032	13.0	22.0	0.039	12.7	5.8	2.6	1	1	1	2	2	2	0	Autophagy	protein	Apg17
PhageMin_Tail	PF10145.4	gi|332797395|ref|YP_004458895.1|	-	0.04	13.5	20.8	0.24	11.0	14.4	2.2	1	1	0	1	1	1	0	Phage-related	minor	tail	protein
Med9	PF07544.8	gi|332797395|ref|YP_004458895.1|	-	0.045	13.4	29.1	1.7	8.4	3.2	4.9	1	1	3	4	4	4	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Cauli_AT	PF03233.8	gi|332797395|ref|YP_004458895.1|	-	0.046	13.4	25.4	0.25	11.0	2.6	4.0	1	1	4	5	5	5	0	Aphid	transmission	protein
WEMBL	PF05701.6	gi|332797395|ref|YP_004458895.1|	-	0.051	12.0	36.9	0.11	10.9	25.5	1.5	1	1	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
COG5	PF10392.4	gi|332797395|ref|YP_004458895.1|	-	0.06	13.3	22.1	1.2	9.0	6.0	3.2	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
Filo_VP35	PF02097.10	gi|332797395|ref|YP_004458895.1|	-	0.072	12.2	20.2	1.4	8.0	1.9	3.3	1	1	2	3	3	3	0	Filoviridae	VP35
Mod_r	PF07200.8	gi|332797395|ref|YP_004458895.1|	-	0.072	13.0	24.0	0.18	11.7	7.4	2.6	1	1	1	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
Taxilin	PF09728.4	gi|332797395|ref|YP_004458895.1|	-	0.074	12.1	26.8	0.33	9.9	18.6	1.8	1	1	0	1	1	1	0	Myosin-like	coiled-coil	protein
AATF-Che1	PF13339.1	gi|332797395|ref|YP_004458895.1|	-	0.075	13.1	21.0	6.7e+03	-2.9	14.4	3.8	1	1	0	1	1	0	0	Apoptosis	antagonizing	transcription	factor
DASH_Duo1	PF08651.5	gi|332797395|ref|YP_004458895.1|	-	0.079	12.5	18.6	1.1	8.8	0.9	5.0	1	1	5	6	6	6	0	DASH	complex	subunit	Duo1
TMF_TATA_bd	PF12325.3	gi|332797395|ref|YP_004458895.1|	-	0.08	12.6	27.7	0.38	10.4	6.7	3.3	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
Transposase_22	PF02994.9	gi|332797395|ref|YP_004458895.1|	-	0.08	11.4	27.7	0.25	9.7	11.6	2.3	1	1	1	2	2	2	0	L1	transposable	element
HTH_psq	PF05225.11	gi|332797395|ref|YP_004458895.1|	-	0.084	12.4	0.7	0.51	9.9	0.0	2.7	3	0	0	3	3	1	0	helix-turn-helix,	Psq	domain
PMEI	PF04043.10	gi|332797395|ref|YP_004458895.1|	-	0.088	12.7	8.9	1	9.2	3.6	2.5	1	1	1	2	2	2	0	Plant	invertase/pectin	methylesterase	inhibitor
SpaB_C	PF14028.1	gi|332797395|ref|YP_004458895.1|	-	0.089	12.3	3.3	0.76	9.2	0.3	2.1	1	1	1	2	2	2	0	SpaB	C-terminal	domain
H-kinase_dim	PF02895.9	gi|332797395|ref|YP_004458895.1|	-	0.11	12.8	21.2	1.5e+04	-7.0	14.7	4.8	1	1	0	1	1	0	0	Signal	transducing	histidine	kinase,	homodimeric	domain
FH2	PF02181.18	gi|332797395|ref|YP_004458895.1|	-	0.12	11.2	19.7	0.71	8.6	2.8	2.7	1	1	2	3	3	3	0	Formin	Homology	2	Domain
Gp58	PF07902.6	gi|332797395|ref|YP_004458895.1|	-	0.13	10.4	18.8	8.4	4.4	9.3	2.9	1	1	0	1	1	1	0	gp58-like	protein
Kinesin-relat_1	PF12711.2	gi|332797395|ref|YP_004458895.1|	-	0.13	12.6	18.6	0.71	10.3	3.2	4.2	1	1	1	2	2	2	0	Kinesin	motor
DUF4248	PF14053.1	gi|332797395|ref|YP_004458895.1|	-	0.13	11.8	3.4	6.5	6.4	0.1	4.5	2	2	3	5	5	3	0	Domain	of	unknown	function	(DUF4248)
DUF2570	PF10828.3	gi|332797395|ref|YP_004458895.1|	-	0.14	11.8	34.4	0.36	10.4	4.2	3.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2570)
Hemerythrin	PF01814.18	gi|332797395|ref|YP_004458895.1|	-	0.14	12.3	5.2	3.2	7.9	1.4	3.3	1	1	1	2	2	2	0	Hemerythrin	HHE	cation	binding	domain
TMEM192	PF14802.1	gi|332797395|ref|YP_004458895.1|	-	0.15	10.9	21.4	3	6.6	0.2	5.5	1	1	5	6	6	6	0	TMEM192	family
Acyl-CoA_dh_C	PF12806.2	gi|332797395|ref|YP_004458895.1|	-	0.16	11.8	20.9	2.7	7.8	2.1	4.4	1	1	1	2	2	1	0	Acetyl-CoA	dehydrogenase	C-terminal	like
DUF4559	PF15112.1	gi|332797395|ref|YP_004458895.1|	-	0.18	10.9	21.6	1.4	8.0	7.7	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4559)
DUF3584	PF12128.3	gi|332797395|ref|YP_004458895.1|	-	0.18	9.0	28.1	0.38	8.0	19.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
TMPIT	PF07851.8	gi|332797395|ref|YP_004458895.1|	-	0.19	10.8	22.8	0.35	9.8	4.4	2.6	1	1	0	2	2	2	0	TMPIT-like	protein
DUF2201_N	PF13203.1	gi|332797395|ref|YP_004458895.1|	-	0.19	10.8	14.3	0.39	9.8	5.7	2.2	1	1	1	2	2	2	0	Putative	metallopeptidase	domain
PEP-utilisers_N	PF05524.8	gi|332797395|ref|YP_004458895.1|	-	0.19	11.4	23.5	0.12	12.1	7.3	3.7	1	1	2	3	3	2	0	PEP-utilising	enzyme,	N-terminal
DUF148	PF02520.12	gi|332797395|ref|YP_004458895.1|	-	0.21	11.3	29.0	1.5	8.6	9.7	3.4	1	1	2	3	3	3	0	Domain	of	unknown	function	DUF148
DUF3571	PF12095.3	gi|332797395|ref|YP_004458895.1|	-	0.23	11.7	14.0	6.4	7.0	0.1	4.2	1	1	4	5	5	5	0	Protein	of	unknown	function	(DUF3571)
Sec8_exocyst	PF04048.9	gi|332797395|ref|YP_004458895.1|	-	0.24	11.0	22.0	3.1	7.4	8.1	3.0	1	1	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
YlbD_coat	PF14071.1	gi|332797395|ref|YP_004458895.1|	-	0.25	11.4	19.9	12	5.9	1.0	4.2	1	1	1	2	2	1	0	Putative	coat	protein
V_ATPase_I	PF01496.14	gi|332797395|ref|YP_004458895.1|	-	0.25	9.1	25.7	0.18	9.5	9.9	2.1	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Syntaxin-6_N	PF09177.6	gi|332797395|ref|YP_004458895.1|	-	0.26	11.7	18.5	14	6.1	4.8	3.5	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Flu_NS2	PF00601.14	gi|332797395|ref|YP_004458895.1|	-	0.26	11.5	9.6	3	8.1	0.2	4.2	1	1	3	4	4	4	0	Influenza	non-structural	protein	(NS2)
DUF4201	PF13870.1	gi|332797395|ref|YP_004458895.1|	-	0.27	10.6	25.9	0.21	10.9	9.0	3.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4201)
DUF3450	PF11932.3	gi|332797395|ref|YP_004458895.1|	-	0.28	10.4	29.4	1.2	8.3	6.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
YjcZ	PF13990.1	gi|332797395|ref|YP_004458895.1|	-	0.28	10.2	20.2	1.3	8.0	1.5	3.3	1	1	2	3	3	3	0	YjcZ-like	protein
DUF641	PF04859.7	gi|332797395|ref|YP_004458895.1|	-	0.3	10.8	26.7	4.6	6.9	3.9	3.8	1	1	2	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
GlnE	PF03710.10	gi|332797395|ref|YP_004458895.1|	-	0.3	10.2	16.7	1.7	7.8	1.5	3.1	1	1	1	2	2	2	0	Glutamate-ammonia	ligase	adenylyltransferase
ALMT	PF11744.3	gi|332797395|ref|YP_004458895.1|	-	0.31	9.6	20.7	0.3	9.7	9.1	2.2	1	1	1	2	2	2	0	Aluminium	activated	malate	transporter
DUF3510	PF12022.3	gi|332797395|ref|YP_004458895.1|	-	0.36	10.9	18.2	53	3.9	0.3	4.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF3510)
Striatin	PF08232.7	gi|332797395|ref|YP_004458895.1|	-	0.36	11.1	24.4	8e+03	-3.0	16.8	3.4	1	1	0	1	1	0	0	Striatin	family
HMG_box_2	PF09011.5	gi|332797395|ref|YP_004458895.1|	-	0.4	11.0	8.8	7.2	7.0	0.1	4.3	1	1	0	4	4	4	0	HMG-box	domain
Pinin_SDK_N	PF04697.8	gi|332797395|ref|YP_004458895.1|	-	0.43	10.6	15.3	6.4	6.8	0.1	5.0	2	1	4	6	6	6	0	pinin/SDK	conserved	region
Tropomyosin	PF00261.15	gi|332797395|ref|YP_004458895.1|	-	0.44	9.6	30.4	0.88	8.6	21.1	1.5	1	1	0	1	1	1	0	Tropomyosin
Prominin	PF05478.6	gi|332797395|ref|YP_004458895.1|	-	0.49	7.8	25.6	0.55	7.6	0.7	3.0	1	1	2	3	3	3	0	Prominin
Phage_GP20	PF06810.6	gi|332797395|ref|YP_004458895.1|	-	0.49	9.8	37.7	0.43	10.0	6.6	3.8	2	1	4	6	6	5	0	Phage	minor	structural	protein	GP20
P4Ha_N	PF08336.6	gi|332797395|ref|YP_004458895.1|	-	0.51	10.1	19.4	0.89	9.3	1.2	4.3	1	1	4	5	5	5	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
Spectrin	PF00435.16	gi|332797395|ref|YP_004458895.1|	-	0.53	10.6	29.9	4.5	7.6	5.7	3.6	1	1	2	3	3	3	0	Spectrin	repeat
RTBV_P46	PF06216.6	gi|332797395|ref|YP_004458895.1|	-	0.58	8.9	14.0	4.4	6.0	0.6	3.3	1	1	2	3	3	3	0	Rice	tungro	bacilliform	virus	P46	protein
EMP24_GP25L	PF01105.19	gi|332797395|ref|YP_004458895.1|	-	0.59	9.8	16.6	2	8.1	0.6	3.5	1	1	1	3	3	3	0	emp24/gp25L/p24	family/GOLD
NAAA-beta	PF15508.1	gi|332797395|ref|YP_004458895.1|	-	0.62	10.4	6.0	51	4.3	0.1	4.1	1	1	4	5	5	5	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
DUF4463	PF14703.1	gi|332797395|ref|YP_004458895.1|	-	0.62	10.6	10.8	6.3	7.3	0.1	4.8	2	1	1	4	4	3	0	Domain	of	unknown	function	(DUF4463)
Tweety	PF04906.8	gi|332797395|ref|YP_004458895.1|	-	0.65	8.3	18.1	0.51	8.6	4.3	2.3	1	1	1	2	2	2	0	Tweety
MT0933_antitox	PF14013.1	gi|332797395|ref|YP_004458895.1|	-	0.7	10.0	14.0	15	5.7	0.6	6.0	3	2	1	5	5	4	0	MT0933-like	antitoxin	protein
HAP1_N	PF04849.8	gi|332797395|ref|YP_004458895.1|	-	0.72	8.7	28.5	1.7	7.5	14.6	2.4	1	1	1	2	2	2	0	HAP1	N-terminal	conserved	region
AIP3	PF03915.8	gi|332797395|ref|YP_004458895.1|	-	0.74	8.6	25.8	2	7.2	9.7	2.2	1	1	1	2	2	2	0	Actin	interacting	protein	3
CCDC155	PF14662.1	gi|332797395|ref|YP_004458895.1|	-	0.77	9.3	29.0	54	3.2	20.2	2.7	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
DivIVA	PF05103.8	gi|332797395|ref|YP_004458895.1|	-	0.77	9.8	33.2	6.2	6.8	8.9	3.3	1	1	2	3	3	3	0	DivIVA	protein
Vps53_N	PF04100.7	gi|332797395|ref|YP_004458895.1|	-	0.78	8.4	27.5	3	6.5	9.7	2.6	1	1	1	2	2	2	0	Vps53-like,	N-terminal
Laminin_II	PF06009.7	gi|332797395|ref|YP_004458895.1|	-	0.78	9.4	29.4	0.21	11.3	4.3	3.4	1	1	3	4	4	3	0	Laminin	Domain	II
GAS	PF13851.1	gi|332797395|ref|YP_004458895.1|	-	0.78	8.8	35.7	0.061	12.5	16.4	2.5	2	1	1	3	3	2	0	Growth-arrest	specific	micro-tubule	binding
KLRAQ	PF10205.4	gi|332797395|ref|YP_004458895.1|	-	0.79	9.7	23.1	1.6	8.7	1.2	3.5	1	1	2	3	3	3	0	Predicted	coiled-coil	domain-containing	protein
SYCE1	PF15233.1	gi|332797395|ref|YP_004458895.1|	-	0.8	9.6	31.7	22	4.9	9.2	3.4	1	1	2	3	3	3	0	Synaptonemal	complex	central	element	protein	1
RmuC	PF02646.11	gi|332797395|ref|YP_004458895.1|	-	0.98	8.1	27.9	0.56	8.9	3.6	3.3	1	1	2	3	3	3	0	RmuC	family
DUF4298	PF14131.1	gi|332797395|ref|YP_004458895.1|	-	1	9.3	16.3	15	5.4	0.4	5.1	1	1	3	5	5	5	0	Domain	of	unknown	function	(DUF4298)
MutS_III	PF05192.13	gi|332797395|ref|YP_004458895.1|	-	1.1	9.0	12.6	11	5.7	8.8	2.2	1	1	0	1	1	1	0	MutS	domain	III
Sec20	PF03908.8	gi|332797395|ref|YP_004458895.1|	-	1.1	9.0	17.8	4.9	6.9	0.9	4.0	1	1	1	3	3	3	0	Sec20
DUF1759	PF03564.10	gi|332797395|ref|YP_004458895.1|	-	1.2	8.9	21.9	0.85	9.4	1.3	3.7	2	1	2	4	4	3	0	Protein	of	unknown	function	(DUF1759)
TMP_2	PF06791.8	gi|332797395|ref|YP_004458895.1|	-	1.2	8.7	24.1	3.1	7.3	8.5	2.5	1	1	1	2	2	2	0	Prophage	tail	length	tape	measure	protein
BRE1	PF08647.6	gi|332797395|ref|YP_004458895.1|	-	1.2	9.1	30.5	1.2	9.1	8.7	4.0	1	1	3	4	4	4	0	BRE1	E3	ubiquitin	ligase
DUF3130	PF11328.3	gi|332797395|ref|YP_004458895.1|	-	1.2	9.2	7.1	11	6.0	0.3	3.1	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3130
OmpH	PF03938.9	gi|332797395|ref|YP_004458895.1|	-	1.3	8.9	38.3	3	7.7	12.8	2.8	1	1	1	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF4200	PF13863.1	gi|332797395|ref|YP_004458895.1|	-	1.4	8.8	32.9	9.9	6.1	5.9	3.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4200)
DUF4140	PF13600.1	gi|332797395|ref|YP_004458895.1|	-	1.5	9.2	27.7	3.8	7.9	2.0	4.3	1	1	3	4	4	4	0	N-terminal	domain	of	unknown	function	(DUF4140)
Orbi_VP5	PF00901.12	gi|332797395|ref|YP_004458895.1|	-	1.6	6.8	31.4	2.3	6.3	4.7	2.2	1	1	1	2	2	2	0	Orbivirus	outer	capsid	protein	VP5
DUF2379	PF09543.5	gi|332797395|ref|YP_004458895.1|	-	1.6	8.6	15.6	2.7	7.9	3.3	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2379)
Nup88	PF10168.4	gi|332797395|ref|YP_004458895.1|	-	1.8	6.3	24.2	0.63	7.8	14.7	1.5	1	1	1	2	2	2	0	Nuclear	pore	component
SATase_N	PF06426.9	gi|332797395|ref|YP_004458895.1|	-	2	8.7	7.4	0.94	9.7	0.2	2.8	1	1	0	2	2	2	0	Serine	acetyltransferase,	N-terminal
Tropomyosin_1	PF12718.2	gi|332797395|ref|YP_004458895.1|	-	2	8.2	32.2	10	5.9	10.8	2.6	1	1	1	2	2	2	0	Tropomyosin	like
MitMem_reg	PF13012.1	gi|332797395|ref|YP_004458895.1|	-	2.1	8.4	15.8	1.6	8.8	5.0	3.2	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
DUF3294	PF07957.6	gi|332797395|ref|YP_004458895.1|	-	2.1	7.7	28.3	6.7	6.1	4.8	4.3	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF3294)
Retrotrans_gag	PF03732.12	gi|332797395|ref|YP_004458895.1|	-	2.6	8.1	6.6	8.5	6.5	0.1	3.2	1	1	1	2	2	2	0	Retrotransposon	gag	protein
APG6	PF04111.7	gi|332797395|ref|YP_004458895.1|	-	2.7	6.9	28.6	10	5.0	10.3	2.2	1	1	1	2	2	2	0	Autophagy	protein	Apg6
Cluap1	PF10234.4	gi|332797395|ref|YP_004458895.1|	-	2.9	7.0	29.6	7.5	5.6	8.2	2.5	1	1	1	2	2	2	0	Clusterin-associated	protein-1
Seryl_tRNA_N	PF02403.17	gi|332797395|ref|YP_004458895.1|	-	3.4	7.7	40.0	3.6	7.6	7.9	4.1	2	1	4	6	6	5	0	Seryl-tRNA	synthetase	N-terminal	domain
DivIC	PF04977.10	gi|332797395|ref|YP_004458895.1|	-	3.6	7.1	32.1	0.35	10.3	1.8	5.1	1	1	3	4	4	4	0	Septum	formation	initiator
ERM	PF00769.14	gi|332797395|ref|YP_004458895.1|	-	4	6.9	30.8	4.2	6.8	15.4	2.2	1	1	1	2	2	2	0	Ezrin/radixin/moesin	family
Lge1	PF11488.3	gi|332797395|ref|YP_004458895.1|	-	4	7.6	20.1	45	4.3	1.8	3.6	1	1	1	2	2	2	0	Transcriptional	regulatory	protein	LGE1
DUF2968	PF11180.3	gi|332797395|ref|YP_004458895.1|	-	4.1	6.7	31.6	1.3	8.3	1.3	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2968)
Fez1	PF06818.10	gi|332797395|ref|YP_004458895.1|	-	4.1	7.3	25.5	3.7	7.5	10.4	2.2	1	1	1	2	2	2	0	Fez1
GLE1	PF07817.8	gi|332797395|ref|YP_004458895.1|	-	4.5	6.1	20.3	2.7	6.8	4.3	2.7	1	1	1	2	2	2	0	GLE1-like	protein
zf-C4H2	PF10146.4	gi|332797395|ref|YP_004458895.1|	-	4.5	7.2	22.4	4	7.3	8.3	2.4	1	1	1	2	2	2	0	Zinc	finger-containing	protein
DUF651	PF04895.7	gi|332797395|ref|YP_004458895.1|	-	4.5	6.9	12.6	10	5.8	0.3	3.8	1	1	3	4	4	3	0	Archaeal	protein	of	unknown	function	(DUF651)
Nsp1_C	PF05064.8	gi|332797395|ref|YP_004458895.1|	-	4.6	6.9	22.9	10	5.7	5.3	3.5	1	1	2	3	3	3	0	Nsp1-like	C-terminal	region
LOH1CR12	PF10158.4	gi|332797395|ref|YP_004458895.1|	-	5.3	6.8	17.9	2.9	7.6	1.2	3.2	1	1	2	3	3	3	0	Tumour	suppressor	protein
Occludin_ELL	PF07303.8	gi|332797395|ref|YP_004458895.1|	-	5.3	7.8	12.0	4.2	8.1	0.9	3.4	1	1	2	3	3	3	0	Occludin	homology	domain
WHEP-TRS	PF00458.15	gi|332797395|ref|YP_004458895.1|	-	6.9	6.4	29.4	19	5.0	0.3	6.7	4	2	1	5	5	5	0	WHEP-TRS	domain
ING	PF12998.2	gi|332797395|ref|YP_004458895.1|	-	6.9	7.0	21.2	3.7	7.8	3.8	3.2	2	1	1	3	3	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Troponin	PF00992.15	gi|332797395|ref|YP_004458895.1|	-	7.4	6.6	35.0	0.15	12.1	6.5	3.5	2	1	2	4	4	3	0	Troponin
Prefoldin_2	PF01920.15	gi|332797395|ref|YP_004458895.1|	-	7.4	6.3	36.2	1.8	8.3	2.1	4.6	1	1	3	4	4	3	0	Prefoldin	subunit
HHH_8	PF14716.1	gi|332797395|ref|YP_004458895.1|	-	7.7	6.7	11.2	14	5.9	0.8	5.1	3	1	0	3	3	2	0	Helix-hairpin-helix	domain
HAUS-augmin3	PF14932.1	gi|332797395|ref|YP_004458895.1|	-	7.8	5.5	32.8	4.9	6.2	11.9	2.3	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
TMCO5	PF14992.1	gi|332797395|ref|YP_004458895.1|	-	8.9	5.3	26.4	19	4.2	18.2	1.5	1	1	0	1	1	1	0	TMCO5	family
AA_permease	PF00324.16	gi|332797396|ref|YP_004458896.1|	-	5.3e-47	160.2	50.0	6.2e-47	160.0	34.7	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|332797396|ref|YP_004458896.1|	-	2.2e-40	138.5	56.5	2.6e-40	138.2	39.2	1.0	1	0	0	1	1	1	1	Amino	acid	permease
Sugar_tr	PF00083.19	gi|332797397|ref|YP_004458897.1|	-	4.8e-41	140.7	25.9	5.6e-41	140.5	18.0	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332797397|ref|YP_004458897.1|	-	4.6e-34	117.6	48.5	2.8e-33	115.1	18.8	1.7	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
NPCBM_assoc	PF10633.4	gi|332797398|ref|YP_004458898.1|	-	0.015	15.3	0.0	0.022	14.7	0.0	1.2	1	0	0	1	1	1	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
zf-DHHC	PF01529.15	gi|332797398|ref|YP_004458898.1|	-	2	7.7	4.0	2.6	7.4	2.8	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
AA_permease_2	PF13520.1	gi|332797400|ref|YP_004458900.1|	-	2.5e-42	144.9	54.2	3.1e-42	144.6	37.6	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332797400|ref|YP_004458900.1|	-	5e-39	133.9	50.2	6.5e-39	133.5	34.8	1.1	1	0	0	1	1	1	1	Amino	acid	permease
PaREP1	PF05942.6	gi|332797401|ref|YP_004458901.1|	-	1.8e-30	105.1	4.9	1.8e-30	105.1	3.4	1.9	2	1	1	3	3	3	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797401|ref|YP_004458901.1|	-	8e-05	22.2	1.0	0.00023	20.7	0.1	2.2	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
DUF4398	PF14346.1	gi|332797401|ref|YP_004458901.1|	-	0.0017	18.3	6.4	0.0025	17.8	3.4	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4398)
YfdX	PF10938.3	gi|332797401|ref|YP_004458901.1|	-	0.012	15.2	1.2	0.051	13.2	0.3	2.0	2	0	0	2	2	2	0	YfdX	protein
BEX	PF04538.7	gi|332797401|ref|YP_004458901.1|	-	0.048	13.8	0.1	0.25	11.5	0.0	2.0	2	1	0	2	2	2	0	Brain	expressed	X-linked	like	family
HEPN	PF05168.9	gi|332797401|ref|YP_004458901.1|	-	0.079	12.8	9.2	0.2	11.5	2.1	2.7	3	1	0	3	3	3	0	HEPN	domain
CRM1_C	PF08767.6	gi|332797401|ref|YP_004458901.1|	-	0.088	11.7	0.0	0.13	11.1	0.0	1.2	1	0	0	1	1	1	0	CRM1	C	terminal
DUF2276	PF10040.4	gi|332797402|ref|YP_004458902.1|	-	8e-12	45.4	0.0	3e-11	43.5	0.0	1.8	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
Cas_Cas6	PF01881.11	gi|332797402|ref|YP_004458902.1|	-	0.04	14.1	0.1	0.11	12.7	0.1	2.0	1	1	0	1	1	1	0	CRISPR	associated	protein	Cas6
EntA_Immun	PF08951.5	gi|332797403|ref|YP_004458903.1|	-	0.011	15.9	2.0	0.014	15.5	1.4	1.1	1	0	0	1	1	1	0	Enterocin	A	Immunity
ComZ	PF10815.3	gi|332797403|ref|YP_004458903.1|	-	0.011	15.4	0.0	0.015	15.0	0.0	1.2	1	0	0	1	1	1	0	ComZ
Arg_repressor	PF01316.16	gi|332797403|ref|YP_004458903.1|	-	0.019	14.5	0.6	0.071	12.6	0.2	1.8	1	1	1	2	2	2	0	Arginine	repressor,	DNA	binding	domain
DUF2683	PF10884.3	gi|332797403|ref|YP_004458903.1|	-	0.11	12.4	1.9	0.16	11.9	1.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2683)
RHH_1	PF01402.16	gi|332797403|ref|YP_004458903.1|	-	1.7	8.6	4.5	2.2	8.3	0.3	2.7	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
PIN	PF01850.16	gi|332797404|ref|YP_004458904.1|	-	4.6e-07	30.1	0.0	5.1e-07	30.0	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
PaREP1	PF05942.6	gi|332797405|ref|YP_004458905.1|	-	4.2e-33	113.6	4.8	6.9e-33	112.9	3.3	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797405|ref|YP_004458905.1|	-	0.00021	20.9	0.4	0.00021	20.9	0.3	2.1	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
DUF4398	PF14346.1	gi|332797405|ref|YP_004458905.1|	-	0.0033	17.4	4.2	0.0054	16.7	2.9	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4398)
Phasin_2	PF09361.5	gi|332797405|ref|YP_004458905.1|	-	0.041	13.8	1.5	0.1	12.6	1.0	1.7	1	1	0	1	1	1	0	Phasin	protein
YfdX	PF10938.3	gi|332797405|ref|YP_004458905.1|	-	0.045	13.4	2.4	0.072	12.7	1.4	1.4	1	1	0	1	1	1	0	YfdX	protein
TFX_C	PF14601.1	gi|332797405|ref|YP_004458905.1|	-	0.05	13.3	0.5	0.13	12.1	0.1	1.8	1	1	1	2	2	2	0	DNA_binding	protein,	TFX,	C-term
USP8_dimer	PF08969.6	gi|332797405|ref|YP_004458905.1|	-	0.075	12.9	2.2	0.15	11.9	0.8	2.1	2	0	0	2	2	2	0	USP8	dimerisation	domain
HEPN	PF05168.9	gi|332797405|ref|YP_004458905.1|	-	2.5	8.0	7.0	1.2	9.0	3.4	1.9	2	1	0	2	2	2	0	HEPN	domain
TarH	PF02203.10	gi|332797406|ref|YP_004458906.1|	-	0.055	13.3	0.6	0.077	12.8	0.4	1.2	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
DUF2370	PF10176.4	gi|332797406|ref|YP_004458906.1|	-	0.14	11.4	0.2	0.24	10.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2370)
DUF454	PF04304.8	gi|332797406|ref|YP_004458906.1|	-	0.56	10.2	3.6	0.91	9.5	2.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF454)
ABC2_membrane_2	PF12679.2	gi|332797407|ref|YP_004458907.1|	-	2.7e-16	59.2	15.8	4e-16	58.6	11.0	1.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|332797407|ref|YP_004458907.1|	-	2e-07	30.3	38.1	2e-07	30.3	26.4	1.6	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
CarboxypepD_reg	PF13620.1	gi|332797407|ref|YP_004458907.1|	-	0.00028	20.8	0.1	0.00053	19.9	0.0	1.5	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
ABC2_membrane_4	PF12730.2	gi|332797407|ref|YP_004458907.1|	-	0.00043	19.5	54.1	0.019	14.1	37.5	3.0	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|332797408|ref|YP_004458908.1|	-	2.8e-23	82.7	0.0	7.4e-23	81.3	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|332797408|ref|YP_004458908.1|	-	9.4e-12	45.4	3.6	2e-10	41.1	0.3	2.6	2	1	0	2	2	2	1	AAA	domain
SRP54	PF00448.17	gi|332797408|ref|YP_004458908.1|	-	0.00052	19.5	0.2	0.0084	15.5	0.0	2.3	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_23	PF13476.1	gi|332797408|ref|YP_004458908.1|	-	0.00093	19.5	1.5	0.0021	18.4	1.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|332797408|ref|YP_004458908.1|	-	0.0071	15.8	0.3	0.35	10.2	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|332797408|ref|YP_004458908.1|	-	0.022	14.2	0.4	0.046	13.2	0.1	1.6	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|332797408|ref|YP_004458908.1|	-	0.023	14.3	0.7	0.054	13.1	0.1	2.0	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|332797408|ref|YP_004458908.1|	-	0.076	12.8	0.0	0.12	12.1	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|332797408|ref|YP_004458908.1|	-	0.11	11.6	0.1	0.26	10.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Fe_dep_repress	PF01325.14	gi|332797409|ref|YP_004458909.1|	-	0.00056	19.8	0.0	0.0015	18.4	0.0	1.8	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|332797409|ref|YP_004458909.1|	-	0.00091	18.9	0.0	0.0021	17.8	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.2	gi|332797409|ref|YP_004458909.1|	-	0.0014	18.2	0.0	0.0035	16.9	0.0	1.6	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.1	gi|332797409|ref|YP_004458909.1|	-	0.003	17.3	0.2	0.0057	16.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|332797409|ref|YP_004458909.1|	-	0.0035	17.0	0.0	0.0072	16.0	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.11	gi|332797409|ref|YP_004458909.1|	-	0.0073	16.3	0.0	0.013	15.5	0.0	1.4	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_24	PF13412.1	gi|332797409|ref|YP_004458909.1|	-	0.011	15.0	0.1	0.082	12.3	0.1	2.4	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|332797409|ref|YP_004458909.1|	-	0.037	14.1	0.0	0.068	13.3	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_11	PF08279.7	gi|332797409|ref|YP_004458909.1|	-	0.042	13.4	0.0	0.098	12.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
MarR	PF01047.17	gi|332797409|ref|YP_004458909.1|	-	0.045	13.4	0.1	0.091	12.4	0.0	1.5	1	0	0	1	1	1	0	MarR	family
TBPIP	PF07106.8	gi|332797409|ref|YP_004458909.1|	-	0.046	13.2	0.4	0.054	13.0	0.2	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HemN_C	PF06969.11	gi|332797409|ref|YP_004458909.1|	-	0.055	13.5	0.1	3.6	7.7	0.1	2.7	2	1	1	3	3	3	0	HemN	C-terminal	domain
HTH_36	PF13730.1	gi|332797409|ref|YP_004458909.1|	-	0.057	13.5	0.0	0.14	12.3	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|332797409|ref|YP_004458909.1|	-	0.081	12.4	0.4	0.2	11.1	0.3	1.7	1	1	0	1	1	1	0	TFIIE	alpha	subunit
DUF1474	PF07342.6	gi|332797410|ref|YP_004458910.1|	-	0.0012	19.0	0.8	0.0069	16.5	0.1	2.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1474)
AAA_22	PF13401.1	gi|332797410|ref|YP_004458910.1|	-	0.092	12.8	1.1	5.9	7.0	0.1	2.4	1	1	1	2	2	2	0	AAA	domain
Transp_cyt_pur	PF02133.10	gi|332797411|ref|YP_004458911.1|	-	1.5e-10	40.2	37.2	2.1e-10	39.7	24.7	1.9	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
PIN	PF01850.16	gi|332797412|ref|YP_004458912.1|	-	7e-07	29.6	0.2	8.7e-07	29.3	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
Aldo_ket_red	PF00248.16	gi|332797412|ref|YP_004458912.1|	-	0.053	12.3	0.0	0.069	11.9	0.0	1.1	1	0	0	1	1	1	0	Aldo/keto	reductase	family
CcdA	PF07362.7	gi|332797413|ref|YP_004458913.1|	-	2.6e-05	23.9	7.3	0.00025	20.8	5.0	2.0	1	1	0	1	1	1	1	Post-segregation	antitoxin	CcdA
Ran-binding	PF05508.6	gi|332797413|ref|YP_004458913.1|	-	0.00072	18.5	3.3	0.00084	18.3	2.3	1.0	1	0	0	1	1	1	1	RanGTP-binding	protein
DUF4145	PF13643.1	gi|332797413|ref|YP_004458913.1|	-	0.002	17.9	1.3	0.0024	17.6	0.9	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4145)
YtxH	PF12732.2	gi|332797413|ref|YP_004458913.1|	-	0.011	16.0	5.5	0.021	15.1	3.8	1.5	1	1	0	1	1	1	0	YtxH-like	protein
PSK_trans_fac	PF07704.6	gi|332797413|ref|YP_004458913.1|	-	0.013	16.2	1.3	0.017	15.7	0.9	1.3	1	1	0	1	1	1	0	Rv0623-like	transcription	factor
Tom37_C	PF11801.3	gi|332797413|ref|YP_004458913.1|	-	0.026	14.3	1.8	0.027	14.3	1.2	1.0	1	0	0	1	1	1	0	Tom37	C-terminal	domain
Syntaxin_2	PF14523.1	gi|332797413|ref|YP_004458913.1|	-	0.027	14.4	1.3	0.032	14.2	0.9	1.2	1	0	0	1	1	1	0	Syntaxin-like	protein
KaiC	PF06745.8	gi|332797413|ref|YP_004458913.1|	-	0.033	13.3	1.9	0.035	13.2	1.4	1.0	1	0	0	1	1	1	0	KaiC
RHH_1	PF01402.16	gi|332797413|ref|YP_004458913.1|	-	0.034	14.0	1.2	0.034	14.0	0.8	2.9	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
DUF4291	PF14124.1	gi|332797413|ref|YP_004458913.1|	-	0.09	12.3	2.6	0.1	12.2	1.8	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4291)
Rop-like	PF05082.8	gi|332797413|ref|YP_004458913.1|	-	0.11	11.9	1.4	0.66	9.4	0.7	2.0	1	1	0	1	1	1	0	Rop-like
PI31_Prot_N	PF11566.3	gi|332797413|ref|YP_004458913.1|	-	0.14	11.7	0.9	0.14	11.7	0.6	1.0	1	0	0	1	1	1	0	PI31	proteasome	regulator	N-terminal
Transferase	PF02458.10	gi|332797413|ref|YP_004458913.1|	-	0.14	10.5	1.4	0.15	10.4	1.0	1.0	1	0	0	1	1	1	0	Transferase	family
DUF89	PF01937.14	gi|332797413|ref|YP_004458913.1|	-	0.16	10.7	1.8	0.16	10.7	1.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF89
HMG_box_2	PF09011.5	gi|332797413|ref|YP_004458913.1|	-	0.17	12.2	4.7	0.19	12.1	2.8	1.4	1	1	0	1	1	1	0	HMG-box	domain
YpjP	PF14005.1	gi|332797413|ref|YP_004458913.1|	-	0.18	11.5	1.8	0.2	11.3	1.2	1.2	1	0	0	1	1	1	0	YpjP-like	protein
HSP70	PF00012.15	gi|332797413|ref|YP_004458913.1|	-	0.44	8.3	6.0	0.53	8.1	4.2	1.0	1	0	0	1	1	1	0	Hsp70	protein
Dynein_light	PF01221.13	gi|332797413|ref|YP_004458913.1|	-	0.44	10.5	2.0	0.62	10.0	1.4	1.3	1	1	0	1	1	1	0	Dynein	light	chain	type	1
Histone_HNS	PF00816.16	gi|332797413|ref|YP_004458913.1|	-	0.51	10.8	8.1	4.9	7.7	3.3	2.1	1	1	1	2	2	2	0	H-NS	histone	family
DUF1003	PF06210.6	gi|332797413|ref|YP_004458913.1|	-	0.66	9.9	2.3	0.78	9.6	1.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1003)
DUF1947	PF09183.5	gi|332797413|ref|YP_004458913.1|	-	1.7	8.4	4.5	0.69	9.7	0.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1947)
DUF1367	PF07105.6	gi|332797414|ref|YP_004458914.1|	-	0.0025	17.2	0.0	0.0029	17.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1367)
zf-TRM13_CCCH	PF11722.3	gi|332797414|ref|YP_004458914.1|	-	0.28	10.5	1.8	0.4	10.0	1.2	1.2	1	0	0	1	1	1	0	CCCH	zinc	finger	in	TRM13	protein
DUF2276	PF10040.4	gi|332797415|ref|YP_004458915.1|	-	3.7e-19	69.1	0.0	6e-19	68.4	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
Hydantoinase_B	PF02538.9	gi|332797416|ref|YP_004458916.1|	-	0.056	11.6	0.1	0.094	10.9	0.0	1.3	1	0	0	1	1	1	0	Hydantoinase	B/oxoprolinase
TFIID_30kDa	PF03540.8	gi|332797417|ref|YP_004458917.1|	-	0.00069	19.3	0.0	0.45	10.3	0.0	2.6	2	0	0	2	2	2	2	Transcription	initiation	factor	TFIID	23-30kDa	subunit
HD	PF01966.17	gi|332797417|ref|YP_004458917.1|	-	0.045	13.7	1.0	0.099	12.6	0.7	1.9	1	1	0	1	1	1	0	HD	domain
DUF4105	PF13387.1	gi|332797417|ref|YP_004458917.1|	-	0.055	12.6	0.1	0.1	11.7	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4105)
DEAD	PF00270.24	gi|332797418|ref|YP_004458918.1|	-	3.5e-12	46.1	0.0	8.9e-12	44.8	0.0	1.7	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332797418|ref|YP_004458918.1|	-	1.1e-05	25.1	0.1	4.4e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332797418|ref|YP_004458918.1|	-	3.8e-05	23.5	0.0	0.00014	21.7	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|332797418|ref|YP_004458918.1|	-	0.0012	18.5	0.1	0.0035	17.0	0.0	1.8	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|332797418|ref|YP_004458918.1|	-	0.0059	16.7	0.0	0.12	12.4	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|332797418|ref|YP_004458918.1|	-	0.008	15.2	0.0	0.014	14.4	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
IstB_IS21	PF01695.12	gi|332797418|ref|YP_004458918.1|	-	0.0081	15.5	0.0	0.021	14.2	0.0	1.7	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|332797418|ref|YP_004458918.1|	-	0.012	14.4	0.0	0.022	13.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|332797418|ref|YP_004458918.1|	-	0.013	15.1	0.0	0.026	14.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|332797418|ref|YP_004458918.1|	-	0.013	15.6	0.3	0.21	11.7	0.2	2.5	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|332797418|ref|YP_004458918.1|	-	0.064	13.5	0.0	0.15	12.3	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
DUF2087	PF09860.4	gi|332797418|ref|YP_004458918.1|	-	0.096	12.4	0.1	0.29	10.9	0.0	1.8	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2087)
AAA_18	PF13238.1	gi|332797418|ref|YP_004458918.1|	-	0.13	12.6	1.0	0.48	10.7	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|332797418|ref|YP_004458918.1|	-	0.13	11.4	0.0	0.23	10.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Cas_Cas5d	PF09704.5	gi|332797419|ref|YP_004458919.1|	-	1e-21	77.5	0.0	1.3e-21	77.2	0.0	1.0	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
DevR	PF01905.11	gi|332797420|ref|YP_004458920.1|	-	1.3e-76	257.0	0.0	1.6e-76	256.7	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	negative	auto-regulator	DevR/Csa2
Cas_Csa5	PF09702.5	gi|332797421|ref|YP_004458921.1|	-	6.4e-41	138.6	1.3	8.8e-41	138.2	0.9	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Csa5)
DUF3024	PF11225.3	gi|332797421|ref|YP_004458921.1|	-	0.066	13.0	0.1	0.98	9.3	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3024)
HTH_24	PF13412.1	gi|332797422|ref|YP_004458922.1|	-	1.9e-06	27.1	0.1	4.5e-06	25.9	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF1887	PF09002.6	gi|332797422|ref|YP_004458922.1|	-	0.0012	17.3	0.5	0.0014	17.0	0.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1887)
HTH_11	PF08279.7	gi|332797422|ref|YP_004458922.1|	-	0.0049	16.4	0.1	0.011	15.3	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
Chromate_transp	PF02417.10	gi|332797422|ref|YP_004458922.1|	-	0.02	14.4	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	Chromate	transporter
DUF2250	PF10007.4	gi|332797422|ref|YP_004458922.1|	-	0.036	13.9	0.1	0.067	13.0	0.1	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Cas_APE2256	PF09651.5	gi|332797422|ref|YP_004458922.1|	-	0.064	12.9	0.0	0.098	12.3	0.0	1.4	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
HTH_27	PF13463.1	gi|332797422|ref|YP_004458922.1|	-	0.081	13.2	0.1	0.13	12.5	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|332797422|ref|YP_004458922.1|	-	0.15	11.8	0.0	0.28	11.0	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF911	PF06023.7	gi|332797423|ref|YP_004458923.1|	-	2.1e-100	335.7	0.0	2.8e-100	335.2	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF911)
PDDEXK_1	PF12705.2	gi|332797423|ref|YP_004458923.1|	-	1.4e-07	31.2	0.0	2.1e-07	30.5	0.0	1.3	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|332797423|ref|YP_004458923.1|	-	6.7e-05	22.8	0.0	0.0062	16.4	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	DUF83
Cas_Cas1	PF01867.11	gi|332797424|ref|YP_004458924.1|	-	4.1e-48	163.8	0.1	7.4e-48	163.0	0.0	1.4	1	1	0	1	1	1	1	CRISPR	associated	protein	Cas1
CRISPR_Cas2	PF09827.4	gi|332797425|ref|YP_004458925.1|	-	2.4e-12	46.8	0.0	2.5e-12	46.7	0.0	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas4	PF01930.12	gi|332797426|ref|YP_004458926.1|	-	2.6e-12	46.9	0.0	3e-12	46.7	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|332797426|ref|YP_004458926.1|	-	0.0002	20.8	0.1	0.11	11.8	0.2	2.2	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
HTH_Mga	PF08280.6	gi|332797427|ref|YP_004458927.1|	-	4.6e-05	23.0	1.0	4.6e-05	23.0	0.7	2.3	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|332797427|ref|YP_004458927.1|	-	5e-05	22.8	0.1	0.00018	21.1	0.1	1.9	1	0	0	1	1	1	1	HTH	domain
HTH_36	PF13730.1	gi|332797427|ref|YP_004458927.1|	-	0.00091	19.3	0.2	0.0021	18.1	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|332797427|ref|YP_004458927.1|	-	0.008	15.5	0.1	0.021	14.2	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HrcA_DNA-bdg	PF03444.10	gi|332797427|ref|YP_004458927.1|	-	0.01	15.2	0.1	0.026	13.9	0.1	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CAP_C	PF08603.6	gi|332797427|ref|YP_004458927.1|	-	0.051	12.9	0.0	0.091	12.1	0.0	1.4	1	0	0	1	1	1	0	Adenylate	cyclase	associated	(CAP)	C	terminal
HTH_Crp_2	PF13545.1	gi|332797427|ref|YP_004458927.1|	-	0.063	13.0	0.0	0.19	11.5	0.0	1.8	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|332797427|ref|YP_004458927.1|	-	0.071	12.6	0.0	0.14	11.6	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332797427|ref|YP_004458927.1|	-	0.11	12.2	0.1	0.28	10.8	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Strep_SA_rep	PF06696.6	gi|332797430|ref|YP_004458930.1|	-	0.011	15.4	0.2	0.018	14.8	0.1	1.3	1	0	0	1	1	1	0	Streptococcal	surface	antigen	repeat
MAP65_ASE1	PF03999.7	gi|332797430|ref|YP_004458930.1|	-	0.034	12.7	0.1	0.038	12.6	0.1	1.1	1	0	0	1	1	1	0	Microtubule	associated	protein	(MAP65/ASE1	family)
AAA_5	PF07728.9	gi|332797432|ref|YP_004458932.1|	-	1.1e-12	47.8	0.0	1.8e-11	43.9	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|332797432|ref|YP_004458932.1|	-	3.2e-05	24.1	0.1	0.00018	21.6	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|332797432|ref|YP_004458932.1|	-	8.6e-05	22.4	0.9	0.00063	19.6	0.0	2.9	2	1	1	3	3	3	1	AAA	domain
AAA_17	PF13207.1	gi|332797432|ref|YP_004458932.1|	-	0.00012	22.9	0.7	0.00012	22.9	0.5	2.8	2	2	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|332797432|ref|YP_004458932.1|	-	0.00052	19.4	0.0	0.0012	18.3	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|332797432|ref|YP_004458932.1|	-	0.0015	18.8	0.0	0.0015	18.8	0.0	3.0	3	1	0	3	3	3	1	AAA	domain
AAA_16	PF13191.1	gi|332797432|ref|YP_004458932.1|	-	0.0026	17.7	0.0	0.0059	16.6	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797432|ref|YP_004458932.1|	-	0.0032	17.6	0.0	0.016	15.3	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|332797432|ref|YP_004458932.1|	-	0.0033	16.6	0.4	0.041	13.0	0.0	2.6	3	0	0	3	3	3	1	Chromatin	associated	protein	KTI12
AAA_2	PF07724.9	gi|332797432|ref|YP_004458932.1|	-	0.0046	16.8	0.0	0.015	15.1	0.0	2.0	1	1	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_33	PF13671.1	gi|332797432|ref|YP_004458932.1|	-	0.0077	16.1	0.0	0.02	14.7	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|332797432|ref|YP_004458932.1|	-	0.0095	16.0	0.1	0.077	13.1	0.0	2.6	1	1	1	2	2	2	1	RNA	helicase
Mg_chelatase	PF01078.16	gi|332797432|ref|YP_004458932.1|	-	0.012	14.7	0.0	0.023	13.8	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.1	gi|332797432|ref|YP_004458932.1|	-	0.017	14.5	0.0	0.037	13.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.7	gi|332797432|ref|YP_004458932.1|	-	0.027	13.5	0.0	0.05	12.6	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
PhoH	PF02562.11	gi|332797432|ref|YP_004458932.1|	-	0.04	13.1	0.0	0.095	11.9	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
AAA_19	PF13245.1	gi|332797432|ref|YP_004458932.1|	-	0.061	13.0	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_31	PF13614.1	gi|332797432|ref|YP_004458932.1|	-	0.075	12.9	0.0	0.4	10.6	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|332797432|ref|YP_004458932.1|	-	0.11	12.4	0.0	0.22	11.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|332797432|ref|YP_004458932.1|	-	0.12	11.9	0.3	0.4	10.1	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|332797432|ref|YP_004458932.1|	-	0.13	11.6	0.0	0.27	10.6	0.0	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Uteroglobin	PF01099.12	gi|332797432|ref|YP_004458932.1|	-	0.36	10.6	4.0	14	5.5	0.0	3.9	3	1	1	4	4	4	0	Uteroglobin	family
SNF2_N	PF00176.18	gi|332797433|ref|YP_004458933.1|	-	2e-17	62.9	0.0	2.8e-17	62.4	0.0	1.1	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
ResIII	PF04851.10	gi|332797433|ref|YP_004458933.1|	-	6e-11	42.5	0.2	1.7e-10	41.0	0.1	1.7	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|332797433|ref|YP_004458933.1|	-	1.3e-09	37.7	0.1	2.3e-09	36.9	0.0	1.3	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_22	PF13401.1	gi|332797433|ref|YP_004458933.1|	-	0.0013	18.8	0.4	0.0049	17.0	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|332797433|ref|YP_004458933.1|	-	0.0034	16.4	0.1	0.0051	15.8	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Flavi_DEAD	PF07652.9	gi|332797433|ref|YP_004458933.1|	-	0.039	13.7	0.0	0.058	13.1	0.0	1.3	1	0	0	1	1	1	0	Flavivirus	DEAD	domain
DUF2465	PF10239.4	gi|332797433|ref|YP_004458933.1|	-	0.099	11.8	0.6	4	6.5	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2465)
Helicase_C	PF00271.26	gi|332797434|ref|YP_004458934.1|	-	1.5e-20	72.8	0.1	3.7e-20	71.5	0.0	1.7	1	1	0	1	1	1	1	Helicase	conserved	C-terminal	domain
Toprim	PF01751.17	gi|332797434|ref|YP_004458934.1|	-	0.075	13.0	0.1	0.31	11.0	0.0	2.0	1	1	1	2	2	2	0	Toprim	domain
Ribosomal_L13e	PF01294.13	gi|332797434|ref|YP_004458934.1|	-	0.12	11.8	0.1	0.18	11.2	0.1	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L13e
DUF4143	PF13635.1	gi|332797435|ref|YP_004458935.1|	-	0.089	12.9	1.0	0.66	10.1	0.0	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4143)
Pox_vIL-18BP	PF05566.7	gi|332797436|ref|YP_004458936.1|	-	0.012	15.6	0.1	0.012	15.6	0.0	1.1	1	0	0	1	1	1	0	Orthopoxvirus	interleukin	18	binding	protein
DUF2247	PF10004.4	gi|332797436|ref|YP_004458936.1|	-	0.015	15.0	0.1	0.017	14.8	0.0	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2247)
N6_N4_Mtase	PF01555.13	gi|332797437|ref|YP_004458937.1|	-	6.2e-11	42.2	6.8	8.7e-11	41.7	0.0	2.7	3	1	0	3	3	3	1	DNA	methylase
UPF0020	PF01170.13	gi|332797437|ref|YP_004458937.1|	-	4.9e-08	32.7	0.1	7.6e-07	28.8	0.1	2.2	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
MethyltransfD12	PF02086.10	gi|332797437|ref|YP_004458937.1|	-	3.1e-05	23.5	0.0	8e-05	22.2	0.0	1.7	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_26	PF13659.1	gi|332797437|ref|YP_004458937.1|	-	0.00049	20.1	0.0	0.0035	17.3	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|332797437|ref|YP_004458937.1|	-	0.018	14.4	0.1	0.96	8.8	0.0	2.4	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
Dzip-like_N	PF13815.1	gi|332797439|ref|YP_004458939.1|	-	0.049	13.4	0.7	1.4	8.7	0.1	2.2	2	0	0	2	2	2	0	Iguana/Dzip1-like	DAZ-interacting	protein	N-terminal
DUF2666	PF10869.3	gi|332797439|ref|YP_004458939.1|	-	2.5	8.1	11.0	7.7	6.5	2.0	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2666)
Thioredoxin	PF00085.15	gi|332797441|ref|YP_004458941.1|	-	0.0021	17.7	0.0	0.0033	17.0	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
zf-ribbon_3	PF13248.1	gi|332797441|ref|YP_004458941.1|	-	0.024	13.8	0.6	4.1	6.7	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332797441|ref|YP_004458941.1|	-	0.057	12.9	1.0	5.6	6.5	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332797441|ref|YP_004458941.1|	-	0.066	12.8	1.1	1.4	8.5	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|332797441|ref|YP_004458941.1|	-	0.079	12.6	1.4	1.5	8.5	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
PaREP1	PF05942.6	gi|332797443|ref|YP_004458943.1|	-	1e-33	115.6	5.6	1.5e-33	115.0	3.9	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797443|ref|YP_004458943.1|	-	4.2e-05	23.1	2.6	0.00017	21.2	0.2	2.5	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
USP8_dimer	PF08969.6	gi|332797443|ref|YP_004458943.1|	-	0.26	11.2	5.2	1.8	8.5	2.1	2.4	2	1	0	2	2	2	0	USP8	dimerisation	domain
DUF4398	PF14346.1	gi|332797443|ref|YP_004458943.1|	-	0.3	11.1	10.3	0.14	12.2	5.6	1.7	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
HEPN	PF05168.9	gi|332797443|ref|YP_004458943.1|	-	0.5	10.2	7.3	0.5	10.2	3.6	2.2	2	1	0	2	2	2	0	HEPN	domain
GAD	PF02938.9	gi|332797443|ref|YP_004458943.1|	-	0.83	9.8	3.6	4.6	7.4	1.3	2.5	2	1	0	2	2	2	0	GAD	domain
HARE-HTH	PF05066.8	gi|332797443|ref|YP_004458943.1|	-	0.96	9.8	3.3	33	4.8	0.0	3.1	3	1	0	3	3	3	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
Apolipoprotein	PF01442.13	gi|332797444|ref|YP_004458944.1|	-	1.6e-06	27.7	24.5	2e-06	27.4	16.5	1.5	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
UPF0102	PF02021.12	gi|332797444|ref|YP_004458944.1|	-	0.00019	21.2	0.1	0.00077	19.3	0.0	2.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0102
DUF4143	PF13635.1	gi|332797444|ref|YP_004458944.1|	-	0.0012	18.9	6.2	0.0019	18.3	4.2	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
NERD	PF08378.6	gi|332797444|ref|YP_004458944.1|	-	0.0031	17.7	0.2	0.0031	17.7	0.1	2.7	1	1	1	2	2	2	1	Nuclease-related	domain
DUF885	PF05960.6	gi|332797444|ref|YP_004458944.1|	-	0.0098	15.0	6.7	0.012	14.7	4.7	1.2	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF885)
FliT	PF05400.8	gi|332797444|ref|YP_004458944.1|	-	0.035	14.5	28.1	0.24	11.8	4.8	3.1	1	1	1	2	2	2	0	Flagellar	protein	FliT
Exonuc_VII_L	PF02601.10	gi|332797444|ref|YP_004458944.1|	-	0.57	9.3	16.5	0.37	9.9	10.0	1.8	1	1	1	2	2	2	0	Exonuclease	VII,	large	subunit
Spectrin	PF00435.16	gi|332797444|ref|YP_004458944.1|	-	1.4	9.2	23.1	1.4e+02	2.8	0.0	4.2	2	1	2	4	4	4	0	Spectrin	repeat
MRP-S31	PF15433.1	gi|332797444|ref|YP_004458944.1|	-	1.5	8.1	17.6	3.9	6.8	5.1	2.1	1	1	1	2	2	2	0	Mitochondrial	28S	ribosomal	protein	S31
Prominin	PF05478.6	gi|332797444|ref|YP_004458944.1|	-	1.8	6.0	8.7	2.4	5.5	6.0	1.4	1	0	0	1	1	1	0	Prominin
KID	PF02524.9	gi|332797444|ref|YP_004458944.1|	-	7.9	7.0	12.5	39	5.0	0.4	5.5	4	0	0	4	4	4	0	KID	repeat
hDGE_amylase	PF14701.1	gi|332797444|ref|YP_004458944.1|	-	8.3	5.1	12.6	11	4.7	8.1	1.5	1	1	0	1	1	1	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
DUF2761	PF10959.3	gi|332797445|ref|YP_004458945.1|	-	0.088	12.4	0.0	0.088	12.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2761)
DUF1352	PF07086.7	gi|332797446|ref|YP_004458946.1|	-	9.3	5.8	12.3	0.036	13.6	1.2	2.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1352)
Ceramidase	PF05875.7	gi|332797449|ref|YP_004458949.1|	-	0.036	13.2	0.4	0.05	12.7	0.2	1.2	1	0	0	1	1	1	0	Ceramidase
LRRNT	PF01462.13	gi|332797449|ref|YP_004458949.1|	-	0.1	12.1	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	Leucine	rich	repeat	N-terminal	domain
DUF1275	PF06912.6	gi|332797449|ref|YP_004458949.1|	-	0.11	11.6	0.7	0.11	11.6	0.5	1.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1275)
DUF202	PF02656.10	gi|332797449|ref|YP_004458949.1|	-	0.29	11.3	2.8	0.69	10.1	1.0	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
ABC2_membrane_5	PF13346.1	gi|332797449|ref|YP_004458949.1|	-	0.34	10.1	7.1	0.55	9.4	4.9	1.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Tetraspannin	PF00335.15	gi|332797449|ref|YP_004458949.1|	-	0.36	10.0	8.5	0.13	11.5	2.7	2.2	2	1	0	2	2	2	0	Tetraspanin	family
YesK	PF14150.1	gi|332797449|ref|YP_004458949.1|	-	0.71	10.0	6.3	0.25	11.4	0.7	2.1	2	0	0	2	2	2	0	YesK-like	protein
EmrE	PF13536.1	gi|332797449|ref|YP_004458949.1|	-	1.4	9.1	5.2	0.61	10.3	1.2	1.9	2	0	0	2	2	2	0	Multidrug	resistance	efflux	transporter
DUF4131	PF13567.1	gi|332797449|ref|YP_004458949.1|	-	1.6	8.0	4.7	0.73	9.2	0.5	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
VIT1	PF01988.14	gi|332797449|ref|YP_004458949.1|	-	2.5	7.5	6.5	0.51	9.7	1.2	1.8	1	1	1	2	2	2	0	VIT	family
OppC_N	PF12911.2	gi|332797449|ref|YP_004458949.1|	-	9.6	5.6	7.5	2.3	7.6	1.6	2.2	1	1	1	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Glyco_transf_11	PF01531.11	gi|332797450|ref|YP_004458950.1|	-	0.0027	16.7	0.0	0.0038	16.2	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	11
PGK	PF00162.14	gi|332797450|ref|YP_004458950.1|	-	0.16	10.5	0.0	0.22	10.0	0.0	1.1	1	0	0	1	1	1	0	Phosphoglycerate	kinase
Statherin	PF03875.8	gi|332797451|ref|YP_004458951.1|	-	1.4	8.8	6.4	0.18	11.7	1.6	1.7	2	0	0	2	2	2	0	Statherin
ABC_tran	PF00005.22	gi|332797455|ref|YP_004458955.1|	-	2e-29	102.6	0.0	3e-29	102.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797455|ref|YP_004458955.1|	-	3e-13	50.3	4.8	1.9e-06	28.1	0.2	2.4	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|332797455|ref|YP_004458955.1|	-	9.2e-08	31.5	3.2	0.0016	17.5	0.1	2.4	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332797455|ref|YP_004458955.1|	-	6.9e-06	26.5	3.0	2.3e-05	24.8	2.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|332797455|ref|YP_004458955.1|	-	6.1e-05	22.4	0.1	0.00011	21.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|332797455|ref|YP_004458955.1|	-	0.00025	20.3	1.1	0.01	15.0	0.1	2.3	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|332797455|ref|YP_004458955.1|	-	0.00031	19.9	0.0	0.00054	19.1	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|332797455|ref|YP_004458955.1|	-	0.0004	20.4	0.0	0.00078	19.4	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797455|ref|YP_004458955.1|	-	0.0094	16.0	0.5	0.03	14.4	0.2	2.1	2	1	0	2	2	2	1	AAA	domain
ABC_ATPase	PF09818.4	gi|332797455|ref|YP_004458955.1|	-	0.012	14.2	0.1	0.024	13.2	0.1	1.4	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_30	PF13604.1	gi|332797455|ref|YP_004458955.1|	-	0.016	14.8	0.0	0.027	14.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|332797455|ref|YP_004458955.1|	-	0.017	14.5	0.2	0.037	13.4	0.1	1.6	1	1	0	1	1	1	0	AAA-like	domain
AAA_19	PF13245.1	gi|332797455|ref|YP_004458955.1|	-	0.017	14.8	0.1	0.044	13.5	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_17	PF13207.1	gi|332797455|ref|YP_004458955.1|	-	0.022	15.5	0.1	0.048	14.4	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|332797455|ref|YP_004458955.1|	-	0.022	14.4	5.8	2.8	7.5	4.0	2.8	1	1	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|332797455|ref|YP_004458955.1|	-	0.029	14.0	0.6	0.073	12.7	0.1	2.1	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_14	PF13173.1	gi|332797455|ref|YP_004458955.1|	-	0.03	14.2	1.5	0.65	9.9	0.0	2.6	1	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|332797455|ref|YP_004458955.1|	-	0.037	13.4	0.0	0.066	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|332797455|ref|YP_004458955.1|	-	0.048	12.5	0.0	0.077	11.8	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Ins_allergen_rp	PF06757.8	gi|332797455|ref|YP_004458955.1|	-	0.054	12.9	0.1	0.11	11.9	0.1	1.5	1	0	0	1	1	1	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
NACHT	PF05729.7	gi|332797455|ref|YP_004458955.1|	-	0.061	12.9	0.1	0.16	11.6	0.1	1.7	1	0	0	1	1	1	0	NACHT	domain
AAA_33	PF13671.1	gi|332797455|ref|YP_004458955.1|	-	0.16	11.8	0.0	0.29	11.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|332797455|ref|YP_004458955.1|	-	0.21	11.7	2.9	4.5	7.4	1.8	2.8	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.18	gi|332797455|ref|YP_004458955.1|	-	0.22	11.5	1.3	0.46	10.4	0.8	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_18	PF13238.1	gi|332797455|ref|YP_004458955.1|	-	0.24	11.6	1.4	2.2	8.6	0.9	2.3	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|332797456|ref|YP_004458956.1|	-	7.6e-17	61.8	0.0	1.1e-16	61.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
Thermopsin	PF05317.6	gi|332797460|ref|YP_004458960.1|	-	3.5e-73	245.8	17.5	3.5e-73	245.8	12.1	3.2	2	1	1	3	3	3	1	Thermopsin
Big_3_4	PF13754.1	gi|332797460|ref|YP_004458960.1|	-	1.6e-08	34.7	0.4	2.7	8.3	0.2	5.0	4	0	0	4	4	4	3	Bacterial	Ig-like	domain	(group	3)
BiPBP_C	PF06832.7	gi|332797460|ref|YP_004458960.1|	-	4.1e-05	23.4	0.0	0.029	14.3	0.0	2.5	2	0	0	2	2	2	2	Penicillin-Binding	Protein	C-terminus	Family
BetaGal_dom4_5	PF13364.1	gi|332797460|ref|YP_004458960.1|	-	0.0039	17.4	2.5	0.21	11.8	0.5	2.6	2	0	0	2	2	2	1	Beta-galactosidase	jelly	roll	domain
PKD	PF00801.15	gi|332797460|ref|YP_004458960.1|	-	0.0068	16.1	5.5	0.24	11.1	0.1	4.3	5	0	0	5	5	5	1	PKD	domain
DUF4625	PF15418.1	gi|332797460|ref|YP_004458960.1|	-	0.085	12.9	0.1	14	5.8	0.0	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4625)
DUF3244	PF11589.3	gi|332797460|ref|YP_004458960.1|	-	0.086	12.5	2.9	1.9	8.2	0.5	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3244)
Y_Y_Y	PF07495.8	gi|332797460|ref|YP_004458960.1|	-	3.1	7.6	19.4	0.94	9.2	0.1	4.9	6	0	0	6	6	6	0	Y_Y_Y	domain
UxuA	PF03786.8	gi|332797461|ref|YP_004458961.1|	-	1.3e-27	96.3	0.1	1.5e-27	96.0	0.0	1.0	1	0	0	1	1	1	1	D-mannonate	dehydratase	(UxuA)
AP_endonuc_2	PF01261.19	gi|332797461|ref|YP_004458961.1|	-	3.5e-06	26.4	0.0	4.4e-06	26.1	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
Ank_2	PF12796.2	gi|332797462|ref|YP_004458962.1|	-	1.9e-20	73.0	0.0	2.5e-20	72.6	0.0	1.1	1	0	0	1	1	1	1	Ankyrin	repeats	(3	copies)
Ank	PF00023.25	gi|332797462|ref|YP_004458962.1|	-	3.2e-20	70.8	0.1	2.8e-11	42.6	0.0	3.1	3	0	0	3	3	3	3	Ankyrin	repeat
Ank_4	PF13637.1	gi|332797462|ref|YP_004458962.1|	-	8.9e-18	64.2	0.1	2.1e-11	44.0	0.0	2.1	1	1	1	2	2	2	2	Ankyrin	repeats	(many	copies)
Ank_5	PF13857.1	gi|332797462|ref|YP_004458962.1|	-	2.2e-14	53.1	0.1	2.5e-12	46.6	0.0	2.1	1	1	1	2	2	2	2	Ankyrin	repeats	(many	copies)
Ank_3	PF13606.1	gi|332797462|ref|YP_004458962.1|	-	1.4e-11	43.4	0.1	8.6e-07	28.6	0.0	3.1	3	0	0	3	3	3	2	Ankyrin	repeat
NUDIX	PF00293.23	gi|332797463|ref|YP_004458963.1|	-	3.5e-17	62.2	0.1	4.1e-17	62.0	0.1	1.0	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|332797463|ref|YP_004458963.1|	-	2.9e-05	23.4	0.1	4e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
Asp_protease_2	PF13650.1	gi|332797464|ref|YP_004458964.1|	-	2.4e-07	31.1	0.0	3e-07	30.8	0.0	1.2	1	0	0	1	1	1	1	Aspartyl	protease
RVP	PF00077.15	gi|332797464|ref|YP_004458964.1|	-	5.8e-05	22.9	0.0	6.5e-05	22.7	0.0	1.1	1	0	0	1	1	1	1	Retroviral	aspartyl	protease
gag-asp_proteas	PF13975.1	gi|332797464|ref|YP_004458964.1|	-	0.00018	21.2	0.0	0.00028	20.6	0.0	1.3	1	0	0	1	1	1	1	gag-polyprotein	putative	aspartyl	protease
DUF1758	PF05585.7	gi|332797464|ref|YP_004458964.1|	-	0.12	11.9	0.0	0.15	11.5	0.0	1.1	1	0	0	1	1	1	0	Putative	peptidase	(DUF1758)
HTH_IclR	PF09339.5	gi|332797465|ref|YP_004458965.1|	-	4.3e-11	42.2	0.0	7.6e-11	41.4	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|332797465|ref|YP_004458965.1|	-	2.3e-10	39.6	0.3	1.9e-08	33.5	0.0	3.0	2	1	1	3	3	3	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|332797465|ref|YP_004458965.1|	-	6.4e-10	38.5	3.2	2.2e-08	33.6	0.8	2.7	1	1	2	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|332797465|ref|YP_004458965.1|	-	3.8e-09	36.0	0.1	8.3e-09	34.9	0.1	1.6	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|332797465|ref|YP_004458965.1|	-	1.3e-06	28.6	0.2	2.5e-06	27.7	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|332797465|ref|YP_004458965.1|	-	1.8e-06	27.4	0.3	0.0015	18.1	0.1	2.6	2	1	0	2	2	2	2	HTH	domain
HTH_28	PF13518.1	gi|332797465|ref|YP_004458965.1|	-	1.9e-06	27.7	0.0	0.063	13.3	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|332797465|ref|YP_004458965.1|	-	1.2e-05	24.6	0.1	2.7e-05	23.5	0.0	1.6	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_20	PF12840.2	gi|332797465|ref|YP_004458965.1|	-	3.9e-05	23.3	0.0	0.00017	21.2	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|332797465|ref|YP_004458965.1|	-	0.0003	20.9	0.0	0.44	10.7	0.0	2.3	1	1	1	2	2	2	2	Winged	helix-turn	helix
HTH_23	PF13384.1	gi|332797465|ref|YP_004458965.1|	-	0.0011	18.5	0.0	1.6	8.4	0.0	2.4	2	0	0	2	2	2	2	Homeodomain-like	domain
DUF2250	PF10007.4	gi|332797465|ref|YP_004458965.1|	-	0.0015	18.3	0.7	0.7	9.8	0.1	2.5	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_5	PF01022.15	gi|332797465|ref|YP_004458965.1|	-	0.0023	17.5	0.1	0.0082	15.7	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|332797465|ref|YP_004458965.1|	-	0.0036	16.9	0.0	0.009	15.7	0.0	1.6	1	0	0	1	1	1	1	MarR	family
FUR	PF01475.14	gi|332797465|ref|YP_004458965.1|	-	0.0072	16.2	0.6	0.071	13.0	0.1	2.2	1	1	1	2	2	2	1	Ferric	uptake	regulator	family
Penicillinase_R	PF03965.11	gi|332797465|ref|YP_004458965.1|	-	0.0095	16.0	1.1	0.022	14.8	0.6	1.7	1	1	1	2	2	2	1	Penicillinase	repressor
PadR	PF03551.9	gi|332797465|ref|YP_004458965.1|	-	0.0098	15.6	0.2	0.15	11.8	0.1	2.2	1	1	1	2	2	2	1	Transcriptional	regulator	PadR-like	family
Rrf2	PF02082.15	gi|332797465|ref|YP_004458965.1|	-	0.017	15.2	0.5	0.11	12.6	0.1	2.3	1	1	0	2	2	2	0	Transcriptional	regulator
Fe_dep_repress	PF01325.14	gi|332797465|ref|YP_004458965.1|	-	0.02	14.8	1.7	0.18	11.8	0.3	2.6	2	1	1	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_10	PF04967.7	gi|332797465|ref|YP_004458965.1|	-	0.033	13.7	0.0	26	4.5	0.0	3.3	3	0	0	3	3	3	0	HTH	DNA	binding	domain
FeoC	PF09012.5	gi|332797465|ref|YP_004458965.1|	-	0.041	13.5	0.0	0.13	11.9	0.0	1.9	1	1	1	2	2	2	0	FeoC	like	transcriptional	regulator
PPR_2	PF13041.1	gi|332797465|ref|YP_004458965.1|	-	0.049	13.5	0.0	0.13	12.2	0.0	1.7	1	0	0	1	1	1	0	PPR	repeat	family
HTH_38	PF13936.1	gi|332797465|ref|YP_004458965.1|	-	0.067	12.7	1.1	14	5.3	0.0	2.8	2	1	0	2	2	2	0	Helix-turn-helix	domain
QueC	PF06508.8	gi|332797466|ref|YP_004458966.1|	-	8.6e-26	90.5	0.5	5.6e-24	84.6	0.4	2.1	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|332797466|ref|YP_004458966.1|	-	0.088	12.2	0.0	11	5.5	0.0	2.2	2	0	0	2	2	2	0	PP-loop	family
DUF1366	PF07104.6	gi|332797467|ref|YP_004458967.1|	-	0.0033	17.0	1.9	0.0038	16.8	1.2	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1366)
MMS22L_N	PF14910.1	gi|332797467|ref|YP_004458967.1|	-	0.051	11.8	0.1	0.054	11.7	0.1	1.0	1	0	0	1	1	1	0	S-phase	genomic	integrity	recombination	mediator,	N-terminal
PIN	PF01850.16	gi|332797467|ref|YP_004458967.1|	-	0.1	12.9	0.2	0.17	12.1	0.1	1.5	1	0	0	1	1	1	0	PIN	domain
Exosortase_EpsH	PF09721.5	gi|332797468|ref|YP_004458968.1|	-	0.078	12.1	1.7	0.96	8.6	0.2	2.1	2	0	0	2	2	2	0	Transmembrane	exosortase	(Exosortase_EpsH)
TMEM154	PF15102.1	gi|332797468|ref|YP_004458968.1|	-	0.47	10.1	2.3	0.77	9.4	1.6	1.2	1	0	0	1	1	1	0	TMEM154	protein	family
Asp_protease_2	PF13650.1	gi|332797469|ref|YP_004458969.1|	-	0.00034	21.0	0.0	0.00061	20.2	0.0	1.4	1	1	0	1	1	1	1	Aspartyl	protease
RVP	PF00077.15	gi|332797469|ref|YP_004458969.1|	-	0.028	14.3	0.2	0.11	12.3	0.1	1.9	1	1	0	1	1	1	0	Retroviral	aspartyl	protease
gag-asp_proteas	PF13975.1	gi|332797469|ref|YP_004458969.1|	-	0.053	13.3	0.0	0.24	11.2	0.0	1.9	2	0	0	2	2	2	0	gag-polyprotein	putative	aspartyl	protease
PaREP1	PF05942.6	gi|332797473|ref|YP_004458973.1|	-	2e-09	37.2	0.1	2.4e-09	37.0	0.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HTH_5	PF01022.15	gi|332797474|ref|YP_004458974.1|	-	6e-17	61.0	0.3	9.8e-17	60.3	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|332797474|ref|YP_004458974.1|	-	3.5e-07	29.8	0.2	1.2e-06	28.1	0.0	1.7	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|332797474|ref|YP_004458974.1|	-	8.5e-07	28.6	0.0	1.2e-06	28.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797474|ref|YP_004458974.1|	-	6e-06	26.1	0.1	9.2e-06	25.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|332797474|ref|YP_004458974.1|	-	0.00025	20.3	0.0	0.00036	19.8	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_9	PF08221.6	gi|332797474|ref|YP_004458974.1|	-	0.0039	17.0	0.2	0.0074	16.1	0.2	1.4	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_38	PF13936.1	gi|332797474|ref|YP_004458974.1|	-	0.0057	16.1	0.0	0.0093	15.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|332797474|ref|YP_004458974.1|	-	0.025	14.1	0.1	0.035	13.6	0.1	1.5	1	1	0	1	1	1	0	TFIIE	alpha	subunit
Arg_repressor	PF01316.16	gi|332797474|ref|YP_004458974.1|	-	0.07	12.6	0.1	5.3	6.6	0.0	2.4	1	1	1	2	2	2	0	Arginine	repressor,	DNA	binding	domain
NUMOD1	PF07453.8	gi|332797474|ref|YP_004458974.1|	-	0.099	12.5	0.0	0.27	11.1	0.0	1.8	1	0	0	1	1	1	0	NUMOD1	domain
MarR_2	PF12802.2	gi|332797474|ref|YP_004458974.1|	-	0.14	11.8	0.0	0.21	11.2	0.0	1.2	1	0	0	1	1	1	0	MarR	family
Pyr_redox_2	PF07992.9	gi|332797475|ref|YP_004458975.1|	-	5.7e-35	121.0	2.5	1.4e-33	116.4	1.8	3.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|332797475|ref|YP_004458975.1|	-	7.9e-23	80.6	0.2	1.6e-22	79.6	0.1	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|332797475|ref|YP_004458975.1|	-	2.4e-12	47.1	0.2	2.4e-12	47.1	0.1	2.7	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797475|ref|YP_004458975.1|	-	6.9e-07	28.4	8.3	0.017	14.0	0.4	3.6	4	0	0	4	4	4	3	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|332797475|ref|YP_004458975.1|	-	8.9e-07	29.1	0.1	0.14	12.2	0.0	3.2	1	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332797475|ref|YP_004458975.1|	-	0.00016	20.2	1.7	0.02	13.3	0.0	2.6	2	1	1	3	3	3	2	HI0933-like	protein
DAO	PF01266.19	gi|332797475|ref|YP_004458975.1|	-	0.00026	20.0	1.0	0.052	12.4	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|332797475|ref|YP_004458975.1|	-	0.0023	16.8	2.4	0.72	8.6	0.0	2.6	3	0	0	3	3	3	2	FAD	binding	domain
PaREP1	PF05942.6	gi|332797476|ref|YP_004458976.1|	-	1.6e-20	73.1	0.2	3.6e-20	71.9	0.0	1.6	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
RecO_C	PF02565.10	gi|332797476|ref|YP_004458976.1|	-	0.029	14.2	0.0	0.12	12.2	0.0	1.8	2	0	0	2	2	2	0	Recombination	protein	O	C	terminal
HEPN	PF05168.9	gi|332797477|ref|YP_004458977.1|	-	8.8e-22	77.2	1.4	9.5e-22	77.1	1.0	1.0	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|332797478|ref|YP_004458978.1|	-	6.3e-11	42.4	0.9	8.8e-11	42.0	0.6	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|332797478|ref|YP_004458978.1|	-	0.013	15.0	0.0	0.017	14.7	0.0	1.2	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
Ribosomal_L19	PF01245.15	gi|332797478|ref|YP_004458978.1|	-	0.074	12.8	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L19
PaREP1	PF05942.6	gi|332797479|ref|YP_004458979.1|	-	2.3e-13	50.0	0.9	2.8e-13	49.7	0.6	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
WEMBL	PF05701.6	gi|332797479|ref|YP_004458979.1|	-	0.063	11.7	0.0	0.075	11.4	0.0	1.0	1	0	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
UPF0066	PF01980.11	gi|332797480|ref|YP_004458980.1|	-	3.9e-38	130.0	0.0	5e-38	129.7	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
DUF2361	PF10153.4	gi|332797481|ref|YP_004458981.1|	-	0.56	10.4	3.9	0.2	11.8	0.3	1.9	2	1	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2361)
PaREP1	PF05942.6	gi|332797482|ref|YP_004458982.1|	-	1.7e-09	37.5	0.1	3.9e-09	36.3	0.0	1.5	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797482|ref|YP_004458982.1|	-	2e-05	24.1	0.1	2.3e-05	23.9	0.1	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
ArsA_ATPase	PF02374.10	gi|332797482|ref|YP_004458982.1|	-	0.031	13.3	0.6	0.033	13.2	0.4	1.0	1	0	0	1	1	1	0	Anion-transporting	ATPase
RHH_1	PF01402.16	gi|332797482|ref|YP_004458982.1|	-	0.031	14.1	1.1	0.053	13.4	0.2	1.8	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
ComZ	PF10815.3	gi|332797482|ref|YP_004458982.1|	-	0.045	13.5	0.8	0.099	12.4	0.0	1.9	2	0	0	2	2	2	0	ComZ
HEPN	PF05168.9	gi|332797482|ref|YP_004458982.1|	-	0.068	13.0	0.3	0.22	11.4	0.0	1.8	2	0	0	2	2	2	0	HEPN	domain
USP8_dimer	PF08969.6	gi|332797482|ref|YP_004458982.1|	-	0.078	12.9	0.6	0.11	12.5	0.4	1.3	1	1	0	1	1	1	0	USP8	dimerisation	domain
Spectrin	PF00435.16	gi|332797483|ref|YP_004458983.1|	-	0.069	13.4	1.0	0.17	12.1	0.7	1.6	1	0	0	1	1	1	0	Spectrin	repeat
Resolvase	PF00239.16	gi|332797484|ref|YP_004458984.1|	-	6.3e-17	61.7	0.4	7.4e-17	61.5	0.2	1.2	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
Exo_endo_phos	PF03372.18	gi|332797485|ref|YP_004458985.1|	-	1.2e-20	74.4	0.0	1.4e-20	74.2	0.0	1.0	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|332797485|ref|YP_004458985.1|	-	1.4e-15	56.9	0.0	1.8e-15	56.6	0.0	1.2	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
DUF4065	PF13274.1	gi|332797485|ref|YP_004458985.1|	-	0.062	14.0	0.2	0.14	12.9	0.1	1.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4065)
SSXRD	PF09514.5	gi|332797485|ref|YP_004458985.1|	-	0.077	12.3	0.0	0.2	11.0	0.0	1.6	1	0	0	1	1	1	0	SSXRD	motif
DUF1625	PF07787.7	gi|332797485|ref|YP_004458985.1|	-	0.094	11.9	0.0	0.14	11.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1625)
HPP	PF04982.8	gi|332797486|ref|YP_004458986.1|	-	5.3e-06	26.2	4.1	5.3e-06	26.2	2.9	1.7	1	1	1	2	2	2	1	HPP	family
Fer4_14	PF13394.1	gi|332797487|ref|YP_004458987.1|	-	3.2e-15	56.2	0.4	1.1e-14	54.4	0.2	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|332797487|ref|YP_004458987.1|	-	6.6e-12	45.9	1.8	2.8e-11	43.8	1.2	2.1	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|332797487|ref|YP_004458987.1|	-	1.2e-07	31.9	2.7	1.1e-06	28.8	1.9	2.1	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
PmbA_TldD	PF01523.11	gi|332797489|ref|YP_004458989.1|	-	1.3e-26	93.6	0.1	2.6e-26	92.5	0.1	1.5	1	1	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|332797490|ref|YP_004458990.1|	-	6.2e-49	166.8	0.6	8.7e-49	166.3	0.4	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF2098	PF09871.4	gi|332797490|ref|YP_004458990.1|	-	0.031	14.1	0.5	0.12	12.2	0.3	2.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
HSDR_N	PF04313.9	gi|332797491|ref|YP_004458991.1|	-	0.013	15.2	0.1	0.02	14.6	0.0	1.2	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
RE_SacI	PF09566.5	gi|332797491|ref|YP_004458991.1|	-	0.12	11.2	0.0	0.13	11.1	0.0	1.1	1	0	0	1	1	1	0	SacI	restriction	endonuclease
Resolvase	PF00239.16	gi|332797492|ref|YP_004458992.1|	-	7.4e-16	58.2	0.1	1.1e-15	57.7	0.1	1.3	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|332797492|ref|YP_004458992.1|	-	2e-11	43.9	0.1	3.9e-11	43.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|332797492|ref|YP_004458992.1|	-	5.9e-11	41.9	0.4	1.7e-10	40.5	0.1	1.9	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|332797492|ref|YP_004458992.1|	-	3.7e-06	26.3	0.0	6.9e-06	25.5	0.0	1.5	1	0	0	1	1	1	1	MerR	family	regulatory	protein
MerR_2	PF13591.1	gi|332797492|ref|YP_004458992.1|	-	0.00016	21.1	1.0	0.0005	19.6	0.0	2.2	3	0	0	3	3	3	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|332797492|ref|YP_004458992.1|	-	0.0048	16.5	0.0	0.015	14.9	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_Mga	PF08280.6	gi|332797492|ref|YP_004458992.1|	-	0.023	14.4	1.9	0.06	13.1	0.0	2.5	3	1	0	3	3	3	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_28	PF13518.1	gi|332797492|ref|YP_004458992.1|	-	0.032	14.2	0.0	0.093	12.7	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
gpW	PF02831.10	gi|332797492|ref|YP_004458992.1|	-	0.042	13.4	0.4	0.12	11.9	0.1	1.9	1	1	1	2	2	2	0	gpW
Sigma70_r4_2	PF08281.7	gi|332797492|ref|YP_004458992.1|	-	0.06	12.8	0.0	0.15	11.5	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
OrfB_IS605	PF01385.14	gi|332797493|ref|YP_004458993.1|	-	2.5e-29	102.2	0.9	3.8e-29	101.7	0.6	1.3	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|332797493|ref|YP_004458993.1|	-	3.3e-23	81.1	0.1	6.1e-23	80.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF2115	PF09888.4	gi|332797493|ref|YP_004458993.1|	-	0.06	13.4	1.6	0.18	11.8	0.0	2.2	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
DZR	PF12773.2	gi|332797493|ref|YP_004458993.1|	-	0.14	12.0	0.4	0.25	11.1	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-FPG_IleRS	PF06827.9	gi|332797493|ref|YP_004458993.1|	-	2.9	7.6	6.6	6.5	6.5	4.5	1.6	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
OrfB_Zn_ribbon	PF07282.6	gi|332797494|ref|YP_004458994.1|	-	1.1e-07	31.3	0.0	2.4e-07	30.3	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332797494|ref|YP_004458994.1|	-	0.00092	18.6	4.6	0.0015	18.0	3.2	1.3	1	0	0	1	1	1	1	Probable	transposase
Resolvase	PF00239.16	gi|332797495|ref|YP_004458995.1|	-	1.1e-18	67.4	0.1	3e-18	66.0	0.1	1.6	2	0	0	2	2	2	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|332797495|ref|YP_004458995.1|	-	5.3e-14	52.1	0.9	1e-13	51.2	0.6	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|332797495|ref|YP_004458995.1|	-	2.8e-05	23.5	0.2	6.3e-05	22.4	0.1	1.7	1	0	0	1	1	1	1	MerR	family	regulatory	protein
MerR_1	PF13411.1	gi|332797495|ref|YP_004458995.1|	-	0.00017	21.2	0.1	0.00055	19.6	0.1	2.0	1	1	0	1	1	1	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|332797495|ref|YP_004458995.1|	-	0.0053	16.3	0.0	0.017	14.7	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|332797495|ref|YP_004458995.1|	-	0.015	15.2	1.1	0.042	13.8	0.1	2.2	3	0	0	3	3	3	0	Helix-turn-helix	domain
Phage_AlpA	PF05930.7	gi|332797495|ref|YP_004458995.1|	-	0.055	13.2	0.0	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
Exc	PF07825.6	gi|332797495|ref|YP_004458995.1|	-	0.15	11.8	0.1	0.24	11.1	0.1	1.3	1	0	0	1	1	1	0	Excisionase-like	protein
AAA_14	PF13173.1	gi|332797496|ref|YP_004458996.1|	-	1.8e-09	37.6	0.0	2.6e-09	37.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|332797496|ref|YP_004458996.1|	-	7.8e-07	29.0	0.3	0.0029	17.3	0.0	2.2	1	1	1	2	2	2	2	Archaeal	ATPase
AAA_22	PF13401.1	gi|332797496|ref|YP_004458996.1|	-	0.0035	17.4	0.3	1.9	8.6	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
Viral_helicase1	PF01443.13	gi|332797496|ref|YP_004458996.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
TPP_enzyme_N	PF02776.13	gi|332797498|ref|YP_004458998.1|	-	1.2e-40	138.7	0.0	4.7e-39	133.6	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|332797498|ref|YP_004458998.1|	-	2.4e-17	62.9	0.0	6.8e-16	58.1	0.0	2.7	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|332797498|ref|YP_004458998.1|	-	2e-06	27.5	0.0	1.1e-05	25.1	0.0	2.2	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
HEPN	PF05168.9	gi|332797499|ref|YP_004458999.1|	-	8.2e-31	106.3	0.2	1.1e-30	105.9	0.1	1.1	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|332797500|ref|YP_004459000.1|	-	6.5e-08	32.8	0.2	1e-07	32.1	0.2	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1394	PF07159.7	gi|332797500|ref|YP_004459000.1|	-	0.09	11.8	0.0	0.11	11.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1394)
Lactamase_B	PF00753.22	gi|332797501|ref|YP_004459001.1|	-	3e-26	92.2	0.1	3.8e-26	91.9	0.1	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332797501|ref|YP_004459001.1|	-	8.4e-06	25.4	0.0	1.2e-05	25.0	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|332797501|ref|YP_004459001.1|	-	0.026	14.2	0.0	0.051	13.2	0.0	1.5	2	0	0	2	2	2	0	Beta-lactamase	superfamily	domain
PaREP1	PF05942.6	gi|332797502|ref|YP_004459002.1|	-	1.4e-34	118.4	6.6	1.4e-34	118.4	4.6	1.4	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797502|ref|YP_004459002.1|	-	9.8e-05	21.9	0.1	0.00033	20.2	0.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
Minor_capsid_2	PF11114.3	gi|332797502|ref|YP_004459002.1|	-	0.039	13.7	0.1	0.057	13.2	0.1	1.2	1	0	0	1	1	1	0	Minor	capsid	protein
DUF4398	PF14346.1	gi|332797502|ref|YP_004459002.1|	-	0.05	13.6	5.3	0.051	13.6	2.6	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4398)
HEPN	PF05168.9	gi|332797502|ref|YP_004459002.1|	-	0.14	12.0	5.3	0.13	12.1	2.2	2.3	2	1	0	2	2	2	0	HEPN	domain
ABC_sub_bind	PF04392.7	gi|332797502|ref|YP_004459002.1|	-	0.17	10.8	2.3	2.3	7.0	0.2	2.2	1	1	1	2	2	2	0	ABC	transporter	substrate	binding	protein
DUF2450	PF10475.4	gi|332797503|ref|YP_004459003.1|	-	0.097	11.5	5.9	0.054	12.3	2.6	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	N-terminal	domain	(DUF2450)
PAP_central	PF04928.12	gi|332797503|ref|YP_004459003.1|	-	0.14	10.9	0.4	0.17	10.6	0.3	1.2	1	0	0	1	1	1	0	Poly(A)	polymerase	central	domain
DUF4145	PF13643.1	gi|332797503|ref|YP_004459003.1|	-	0.16	11.8	7.7	1.8	8.4	3.5	3.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4145)
DUF3964	PF13107.1	gi|332797504|ref|YP_004459004.1|	-	0.039	14.2	0.9	0.24	11.6	0.1	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3964)
UPF0061	PF02696.9	gi|332797504|ref|YP_004459004.1|	-	0.079	11.2	0.2	0.23	9.7	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	ACR,	YdiU/UPF0061	family
MMS19_N	PF14500.1	gi|332797507|ref|YP_004459007.1|	-	0.0068	15.6	0.0	0.038	13.2	0.0	1.8	1	1	1	2	2	2	1	Dos2-interacting	transcription	regulator	of	RNA-Pol-II
DUF4110	PF13422.1	gi|332797507|ref|YP_004459007.1|	-	0.026	14.3	0.5	6.4	6.6	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4110)
ARS2	PF04959.8	gi|332797507|ref|YP_004459007.1|	-	0.035	14.2	1.2	0.057	13.6	0.8	1.3	1	0	0	1	1	1	0	Arsenite-resistance	protein	2
HEAT_2	PF13646.1	gi|332797507|ref|YP_004459007.1|	-	0.057	13.6	0.0	0.58	10.4	0.0	2.3	2	1	0	2	2	2	0	HEAT	repeats
DUF3546	PF12066.3	gi|332797507|ref|YP_004459007.1|	-	0.092	12.7	0.8	0.23	11.4	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3546)
FlhC	PF05280.6	gi|332797507|ref|YP_004459007.1|	-	0.12	11.7	0.5	1.9	7.9	0.0	2.1	1	1	1	2	2	2	0	Flagellar	transcriptional	activator	(FlhC)
DUF2779	PF11074.3	gi|332797508|ref|YP_004459008.1|	-	0.011	15.7	0.1	0.025	14.6	0.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function(DUF2779)
AKNA	PF12443.3	gi|332797508|ref|YP_004459008.1|	-	0.021	14.8	0.3	0.06	13.3	0.0	1.9	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
DUF1931	PF09123.6	gi|332797508|ref|YP_004459008.1|	-	0.053	13.4	0.3	1.4	8.8	0.2	2.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1931)
AAA_14	PF13173.1	gi|332797508|ref|YP_004459008.1|	-	0.084	12.7	1.8	1.3	8.9	0.1	2.4	1	1	0	2	2	2	0	AAA	domain
BacA	PF02673.13	gi|332797509|ref|YP_004459009.1|	-	4.2e-46	157.2	15.6	5.4e-46	156.8	10.8	1.1	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
DUF1751	PF08551.5	gi|332797509|ref|YP_004459009.1|	-	2	8.8	6.3	0.6	10.4	0.1	2.5	2	0	0	2	2	2	0	Eukaryotic	integral	membrane	protein	(DUF1751)
ESR1_C	PF12743.2	gi|332797510|ref|YP_004459010.1|	-	0.45	10.0	1.8	1.5	8.4	0.1	2.2	2	0	0	2	2	2	0	Oestrogen-type	nuclear	receptor	final	C-terminal
OrfB_Zn_ribbon	PF07282.6	gi|332797511|ref|YP_004459011.1|	-	3e-18	65.2	0.8	9.4e-18	63.6	0.2	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332797511|ref|YP_004459011.1|	-	2.3e-10	40.2	0.9	2.3e-10	40.2	0.7	1.5	2	0	0	2	2	2	1	Probable	transposase
zf-RING_4	PF14570.1	gi|332797511|ref|YP_004459011.1|	-	0.3	10.7	2.8	0.28	10.7	1.1	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
PaREP1	PF05942.6	gi|332797512|ref|YP_004459012.1|	-	1.5e-23	82.8	2.0	5e-23	81.1	0.2	2.0	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
Lip_prot_lig_C	PF10437.4	gi|332797512|ref|YP_004459012.1|	-	0.058	13.0	0.3	5.3	6.8	0.2	2.5	1	1	1	2	2	2	0	Bacterial	lipoate	protein	ligase	C-terminus
DUF72	PF01904.13	gi|332797513|ref|YP_004459013.1|	-	1.4e-39	136.2	0.3	1.5e-39	136.1	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
AP_endonuc_2	PF01261.19	gi|332797513|ref|YP_004459013.1|	-	0.0031	16.8	0.0	0.011	15.0	0.0	1.8	1	1	1	2	2	2	1	Xylose	isomerase-like	TIM	barrel
DUF262	PF03235.9	gi|332797513|ref|YP_004459013.1|	-	0.062	13.2	2.9	0.086	12.7	2.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF262
AIF-MLS	PF14962.1	gi|332797513|ref|YP_004459013.1|	-	0.21	11.2	1.6	0.38	10.3	0.4	1.8	2	0	0	2	2	2	0	Mitochondria	Localisation	Sequence
SfsA	PF03749.8	gi|332797514|ref|YP_004459014.1|	-	3.2e-52	177.1	0.0	4.3e-52	176.7	0.0	1.1	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
GCHY-1	PF02649.9	gi|332797514|ref|YP_004459014.1|	-	0.022	14.0	0.0	0.035	13.3	0.0	1.2	1	0	0	1	1	1	0	Type	I	GTP	cyclohydrolase	folE2
PaREP1	PF05942.6	gi|332797515|ref|YP_004459015.1|	-	4.6e-05	23.2	0.1	0.00019	21.2	0.0	1.7	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|332797515|ref|YP_004459015.1|	-	0.0021	17.7	0.0	0.0025	17.4	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
DUF1104	PF06518.6	gi|332797515|ref|YP_004459015.1|	-	0.039	14.0	0.0	0.057	13.5	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
Spore_YtrH	PF14034.1	gi|332797516|ref|YP_004459016.1|	-	0.0089	15.9	1.9	0.0089	15.9	1.3	1.5	2	0	0	2	2	2	1	Sporulation	protein	YtrH
Aldo_ket_red	PF00248.16	gi|332797518|ref|YP_004459018.1|	-	1.7e-69	233.7	0.1	2e-69	233.5	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
DUF3800	PF12686.2	gi|332797519|ref|YP_004459019.1|	-	3.1e-06	26.9	1.0	3.6e-06	26.7	0.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3800)
Peptidase_S74	PF13884.1	gi|332797520|ref|YP_004459020.1|	-	0.063	13.4	0.0	0.075	13.1	0.0	1.4	1	1	0	1	1	1	0	Chaperone	of	endosialidase
Laminin_G_2	PF02210.19	gi|332797520|ref|YP_004459020.1|	-	0.068	13.2	0.0	0.084	12.9	0.0	1.1	1	0	0	1	1	1	0	Laminin	G	domain
DUF883	PF05957.8	gi|332797522|ref|YP_004459022.1|	-	0.056	13.8	1.5	0.54	10.6	0.1	2.0	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Phasin	PF05597.6	gi|332797522|ref|YP_004459022.1|	-	0.059	13.1	2.2	0.08	12.7	1.5	1.3	1	0	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
VirionAssem_T7	PF11653.3	gi|332797522|ref|YP_004459022.1|	-	0.44	11.3	5.9	0.82	10.4	3.1	2.0	1	1	1	2	2	2	0	Bacteriophage	T7	virion	assembly	protein
YtxH	PF12732.2	gi|332797522|ref|YP_004459022.1|	-	0.87	9.9	7.6	49	4.3	5.3	2.2	1	1	0	1	1	1	0	YtxH-like	protein
MltA	PF03562.12	gi|332797523|ref|YP_004459023.1|	-	0.005	16.5	0.0	0.0054	16.4	0.0	1.1	1	0	0	1	1	1	1	MltA	specific	insert	domain
Ninjurin	PF04923.7	gi|332797524|ref|YP_004459024.1|	-	0.42	10.3	3.2	0.87	9.3	0.0	2.2	2	1	0	2	2	2	0	Ninjurin
ABC_tran	PF00005.22	gi|332797525|ref|YP_004459025.1|	-	3e-12	47.0	0.0	4.2e-12	46.5	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_29	PF13555.1	gi|332797525|ref|YP_004459025.1|	-	4.8e-07	29.2	0.1	7.9e-07	28.5	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.1	gi|332797525|ref|YP_004459025.1|	-	1.2e-06	28.6	2.1	1.8e-06	28.1	1.5	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|332797525|ref|YP_004459025.1|	-	2.1e-05	24.9	1.2	3.2e-05	24.3	0.8	1.3	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|332797525|ref|YP_004459025.1|	-	0.00057	20.0	0.0	0.00062	19.9	0.0	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.1	gi|332797525|ref|YP_004459025.1|	-	0.00093	18.3	0.6	0.0011	18.0	0.4	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|332797525|ref|YP_004459025.1|	-	0.00094	18.4	0.3	0.0035	16.6	0.1	1.9	1	1	1	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
Zeta_toxin	PF06414.7	gi|332797525|ref|YP_004459025.1|	-	0.0011	18.1	0.0	0.0013	17.8	0.0	1.2	1	0	0	1	1	1	1	Zeta	toxin
AAA_16	PF13191.1	gi|332797525|ref|YP_004459025.1|	-	0.0015	18.5	0.1	0.0017	18.3	0.0	1.2	1	1	0	1	1	1	1	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|332797525|ref|YP_004459025.1|	-	0.0019	17.3	0.0	0.0027	16.9	0.0	1.2	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|332797525|ref|YP_004459025.1|	-	0.0039	17.9	0.2	0.0052	17.6	0.1	1.3	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|332797525|ref|YP_004459025.1|	-	0.0059	16.3	0.1	0.0072	16.0	0.0	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
T2SE	PF00437.15	gi|332797525|ref|YP_004459025.1|	-	0.0066	15.3	0.0	0.0082	15.0	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_25	PF13481.1	gi|332797525|ref|YP_004459025.1|	-	0.0071	15.7	0.0	0.011	15.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Rad17	PF03215.10	gi|332797525|ref|YP_004459025.1|	-	0.0085	14.8	0.0	0.0092	14.7	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_5	PF07728.9	gi|332797525|ref|YP_004459025.1|	-	0.012	15.3	0.0	0.019	14.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.7	gi|332797525|ref|YP_004459025.1|	-	0.013	15.1	0.0	0.021	14.5	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
DUF815	PF05673.8	gi|332797525|ref|YP_004459025.1|	-	0.015	14.2	0.0	0.016	14.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_33	PF13671.1	gi|332797525|ref|YP_004459025.1|	-	0.021	14.6	0.0	0.023	14.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|332797525|ref|YP_004459025.1|	-	0.026	14.9	0.1	0.036	14.5	0.0	1.6	1	1	0	1	1	1	0	Miro-like	protein
AAA_19	PF13245.1	gi|332797525|ref|YP_004459025.1|	-	0.026	14.2	0.0	0.034	13.8	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
G-alpha	PF00503.15	gi|332797525|ref|YP_004459025.1|	-	0.027	13.1	0.1	0.041	12.5	0.1	1.2	1	1	0	1	1	1	0	G-protein	alpha	subunit
NTPase_1	PF03266.10	gi|332797525|ref|YP_004459025.1|	-	0.032	13.9	0.0	0.047	13.3	0.0	1.2	1	0	0	1	1	1	0	NTPase
AAA_30	PF13604.1	gi|332797525|ref|YP_004459025.1|	-	0.05	13.1	0.0	0.059	12.9	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|332797525|ref|YP_004459025.1|	-	0.056	12.6	0.2	0.092	11.9	0.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|332797525|ref|YP_004459025.1|	-	0.062	13.1	0.0	0.07	13.0	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|332797525|ref|YP_004459025.1|	-	0.068	13.1	0.0	0.091	12.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|332797525|ref|YP_004459025.1|	-	0.07	12.5	0.5	0.11	11.9	0.2	1.4	1	1	0	1	1	1	0	AAA-like	domain
MMR_HSR1	PF01926.18	gi|332797525|ref|YP_004459025.1|	-	0.072	13.0	0.5	0.086	12.8	0.4	1.4	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_18	PF13238.1	gi|332797525|ref|YP_004459025.1|	-	0.078	13.2	0.3	0.1	12.9	0.2	1.3	1	1	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|332797525|ref|YP_004459025.1|	-	0.079	12.4	0.1	0.24	10.8	0.0	1.7	1	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF3882	PF07066.6	gi|332797525|ref|YP_004459025.1|	-	0.084	12.7	0.1	0.1	12.4	0.1	1.1	1	0	0	1	1	1	0	Lactococcus	phage	M3	protein
Gtr1_RagA	PF04670.7	gi|332797525|ref|YP_004459025.1|	-	0.085	11.9	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
AAA_24	PF13479.1	gi|332797525|ref|YP_004459025.1|	-	0.1	12.1	0.1	0.15	11.6	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332797525|ref|YP_004459025.1|	-	0.11	11.9	0.3	0.44	10.0	0.1	1.8	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
SH3_2	PF07653.12	gi|332797525|ref|YP_004459025.1|	-	0.14	11.7	0.0	0.25	10.8	0.0	1.5	1	0	0	1	1	1	0	Variant	SH3	domain
RNA_helicase	PF00910.17	gi|332797525|ref|YP_004459025.1|	-	0.14	12.3	0.1	0.17	12.0	0.0	1.5	1	1	0	1	1	1	0	RNA	helicase
Ald_Xan_dh_C2	PF02738.13	gi|332797526|ref|YP_004459026.1|	-	7.2e-103	344.7	0.0	9.5e-103	344.3	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|332797526|ref|YP_004459026.1|	-	2.8e-20	72.4	0.0	4.5e-20	71.7	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
PIH1	PF08190.7	gi|332797527|ref|YP_004459027.1|	-	0.11	11.8	0.0	0.17	11.3	0.0	1.2	1	0	0	1	1	1	0	pre-RNA	processing	PIH1/Nop17
Rifin_STEVOR	PF02009.11	gi|332797527|ref|YP_004459027.1|	-	1.7	8.2	5.2	2.4	7.7	3.6	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Laminin_G_3	PF13385.1	gi|332797528|ref|YP_004459028.1|	-	1.5e-07	31.8	1.8	1.8e-05	25.0	0.2	2.9	2	1	0	2	2	2	2	Concanavalin	A-like	lectin/glucanases	superfamily
Toxin_2	PF00451.14	gi|332797528|ref|YP_004459028.1|	-	0.026	14.6	1.1	0.1	12.7	0.8	2.0	1	0	0	1	1	1	0	Scorpion	short	toxin,	BmKK2
Pentaxin	PF00354.12	gi|332797528|ref|YP_004459028.1|	-	0.085	12.2	0.0	0.34	10.3	0.0	2.0	2	0	0	2	2	2	0	Pentaxin	family
Adeno_E3_CR2	PF02439.10	gi|332797529|ref|YP_004459029.1|	-	0.061	12.8	1.6	0.17	11.4	1.1	1.8	1	0	0	1	1	1	0	Adenovirus	E3	region	protein	CR2
Baculo_11_kDa	PF06143.6	gi|332797529|ref|YP_004459029.1|	-	0.082	12.2	0.2	0.15	11.4	0.1	1.4	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
DUF2516	PF10724.4	gi|332797529|ref|YP_004459029.1|	-	0.09	12.7	0.3	0.2	11.6	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2516)
OppC_N	PF12911.2	gi|332797532|ref|YP_004459032.1|	-	0.18	11.2	1.1	0.36	10.2	0.7	1.5	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Gag_p24	PF00607.15	gi|332797533|ref|YP_004459033.1|	-	0.0028	17.2	0.0	0.0043	16.6	0.0	1.2	1	0	0	1	1	1	1	gag	gene	protein	p24	(core	nucleocapsid	protein)
PhaC_N	PF07167.8	gi|332797533|ref|YP_004459033.1|	-	0.0028	17.0	0.2	0.0038	16.6	0.1	1.3	1	0	0	1	1	1	1	Poly-beta-hydroxybutyrate	polymerase	(PhaC)	N-terminus
Chlorosome_CsmC	PF11098.3	gi|332797533|ref|YP_004459033.1|	-	0.036	13.7	0.9	0.065	12.9	0.6	1.4	1	0	0	1	1	1	0	Chlorosome	envelope	protein	C
DUF3800	PF12686.2	gi|332797534|ref|YP_004459034.1|	-	0.0028	17.3	0.1	0.67	9.5	0.0	2.2	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3800)
Ras_bdg_2	PF14847.1	gi|332797534|ref|YP_004459034.1|	-	0.084	12.8	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Ras-binding	domain	of	Byr2
dUTPase	PF00692.14	gi|332797535|ref|YP_004459035.1|	-	0.069	12.6	0.0	0.16	11.4	0.0	1.6	2	0	0	2	2	2	0	dUTPase
DUF2721	PF11026.3	gi|332797536|ref|YP_004459036.1|	-	0.49	10.0	0.0	0.49	10.0	0.0	3.3	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2721)
ABC2_membrane_2	PF12679.2	gi|332797537|ref|YP_004459037.1|	-	1.7e-14	53.3	23.0	2.3e-14	52.9	15.9	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|332797537|ref|YP_004459037.1|	-	8.5e-07	28.3	38.9	1e-06	28.0	27.0	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
AA_permease_2	PF13520.1	gi|332797539|ref|YP_004459039.1|	-	3.5e-34	118.0	59.4	3.5e-34	118.0	41.1	2.1	1	1	1	2	2	2	2	Amino	acid	permease
AA_permease	PF00324.16	gi|332797539|ref|YP_004459039.1|	-	2.6e-24	85.4	58.0	2.6e-24	85.4	40.2	2.0	1	1	1	2	2	2	1	Amino	acid	permease
Arch_ATPase	PF01637.13	gi|332797540|ref|YP_004459040.1|	-	4.1e-18	65.9	7.3	4.1e-18	65.9	5.1	2.6	1	1	1	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|332797540|ref|YP_004459040.1|	-	2.6e-10	40.3	2.2	4.4e-05	23.3	0.1	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|332797540|ref|YP_004459040.1|	-	1.4e-07	31.7	0.0	3.1e-07	30.5	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797540|ref|YP_004459040.1|	-	4.6e-06	26.7	0.1	0.00014	22.0	0.0	2.7	1	1	1	2	2	2	1	AAA	domain
DUF4423	PF14394.1	gi|332797540|ref|YP_004459040.1|	-	0.0013	18.2	0.1	0.0034	16.9	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Fe_dep_repress	PF01325.14	gi|332797540|ref|YP_004459040.1|	-	0.043	13.7	0.1	0.14	12.1	0.0	1.9	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
SNF2_N	PF00176.18	gi|332797540|ref|YP_004459040.1|	-	0.053	12.3	0.3	0.33	9.7	0.1	2.0	2	0	0	2	2	2	0	SNF2	family	N-terminal	domain
AAA_25	PF13481.1	gi|332797540|ref|YP_004459040.1|	-	0.059	12.7	0.0	6.1	6.1	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
MarR	PF01047.17	gi|332797540|ref|YP_004459040.1|	-	0.066	12.9	0.0	0.21	11.3	0.0	1.8	1	0	0	1	1	1	0	MarR	family
zf-RING_UBOX	PF13445.1	gi|332797540|ref|YP_004459040.1|	-	0.14	11.8	0.4	0.52	10.0	0.3	2.0	1	0	0	1	1	1	0	RING-type	zinc-finger
zf-C3HC4_3	PF13920.1	gi|332797540|ref|YP_004459040.1|	-	0.15	11.7	0.1	0.27	10.9	0.1	1.4	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
AAA_35	PF14516.1	gi|332797540|ref|YP_004459040.1|	-	0.23	10.0	4.6	4.3	5.8	0.1	3.2	3	1	1	4	4	4	0	AAA-like	domain
DUF262	PF03235.9	gi|332797540|ref|YP_004459040.1|	-	4.5	7.1	10.1	0.47	10.3	0.1	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	DUF262
Ald_Xan_dh_C2	PF02738.13	gi|332797541|ref|YP_004459041.1|	-	8.5e-147	489.7	0.0	1.1e-146	489.4	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|332797541|ref|YP_004459041.1|	-	2.6e-27	95.0	0.0	5.3e-27	94.0	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
BTAD	PF03704.12	gi|332797541|ref|YP_004459041.1|	-	0.044	14.0	0.0	0.095	13.0	0.0	1.5	1	0	0	1	1	1	0	Bacterial	transcriptional	activator	domain
SpoIIIAH	PF12685.2	gi|332797541|ref|YP_004459041.1|	-	0.11	11.9	0.2	0.18	11.2	0.1	1.4	1	0	0	1	1	1	0	SpoIIIAH-like	protein
DUF1404	PF07185.6	gi|332797542|ref|YP_004459042.1|	-	1.4e-56	190.7	13.5	1.6e-56	190.5	9.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
COX1	PF00115.15	gi|332797543|ref|YP_004459043.1|	-	3.7e-72	243.3	59.7	5e-72	242.9	41.4	1.2	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX2	PF00116.15	gi|332797544|ref|YP_004459044.1|	-	8.5e-10	38.5	0.3	1.4e-09	37.8	0.2	1.4	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
SoxE	PF06525.6	gi|332797545|ref|YP_004459045.1|	-	4.1e-49	166.5	10.8	4.7e-49	166.3	7.5	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
TAP35_44	PF07265.6	gi|332797545|ref|YP_004459045.1|	-	0.1	12.3	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	Tapetum	specific	protein	TAP35/TAP44
LigB	PF02900.13	gi|332797546|ref|YP_004459046.1|	-	8.3e-23	80.7	0.0	1e-22	80.4	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
BRCT	PF00533.21	gi|332797546|ref|YP_004459046.1|	-	0.027	14.6	0.0	0.041	14.0	0.0	1.3	1	0	0	1	1	1	0	BRCA1	C	Terminus	(BRCT)	domain
OrfB_Zn_ribbon	PF07282.6	gi|332797547|ref|YP_004459047.1|	-	5e-22	77.3	1.8	7.8e-22	76.7	0.3	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332797547|ref|YP_004459047.1|	-	9.1e-08	31.7	3.6	1.9e-07	30.7	2.5	1.6	1	1	0	1	1	1	1	Probable	transposase
CpXC	PF14353.1	gi|332797547|ref|YP_004459047.1|	-	0.18	11.7	1.4	9.8	6.1	0.0	3.3	3	1	0	3	3	3	0	CpXC	protein
AIRS_C	PF02769.17	gi|332797548|ref|YP_004459048.1|	-	2e-06	27.8	0.1	6.9e-06	26.1	0.0	1.9	2	1	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
DrsE_2	PF13686.1	gi|332797549|ref|YP_004459049.1|	-	8.9e-07	28.7	0.0	1.1e-06	28.4	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
Synaptobrevin	PF00957.16	gi|332797550|ref|YP_004459050.1|	-	4.8	6.8	7.4	8.5	6.0	5.2	1.4	1	0	0	1	1	1	0	Synaptobrevin
SoxE	PF06525.6	gi|332797551|ref|YP_004459051.1|	-	1e-52	178.2	12.0	1.3e-52	177.9	8.3	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
SieB	PF14163.1	gi|332797552|ref|YP_004459052.1|	-	8.4	5.9	8.0	2	7.9	2.2	2.3	2	0	0	2	2	2	0	Superinfection	exclusion	protein	B
Rieske	PF00355.21	gi|332797553|ref|YP_004459053.1|	-	1.5e-09	37.2	0.1	3.2e-09	36.2	0.0	1.7	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
UCR_Fe-S_N	PF10399.4	gi|332797553|ref|YP_004459053.1|	-	0.023	13.8	0.1	0.045	12.9	0.1	1.4	1	0	0	1	1	1	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
Molydop_binding	PF01568.16	gi|332797554|ref|YP_004459054.1|	-	1.8e-16	59.9	0.0	4.2e-16	58.7	0.0	1.7	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
HTH_8	PF02954.14	gi|332797554|ref|YP_004459054.1|	-	0.16	11.5	0.2	0.92	9.1	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
DUF2173	PF09941.4	gi|332797556|ref|YP_004459056.1|	-	7.3e-44	148.1	2.3	8.2e-44	147.9	1.6	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
DREV	PF05219.7	gi|332797556|ref|YP_004459056.1|	-	0.0061	15.4	0.0	0.0079	15.1	0.0	1.1	1	0	0	1	1	1	1	DREV	methyltransferase
Robl_LC7	PF03259.12	gi|332797556|ref|YP_004459056.1|	-	0.027	14.0	0.0	0.043	13.3	0.0	1.3	1	0	0	1	1	1	0	Roadblock/LC7	domain
FlgM	PF04316.8	gi|332797556|ref|YP_004459056.1|	-	0.074	13.0	0.1	0.27	11.1	0.0	1.9	2	0	0	2	2	2	0	Anti-sigma-28	factor,	FlgM
Aldose_epim	PF01263.15	gi|332797557|ref|YP_004459057.1|	-	3.2e-43	147.9	0.0	5.4e-43	147.2	0.0	1.4	1	1	0	1	1	1	1	Aldose	1-epimerase
DUF3124	PF11322.3	gi|332797557|ref|YP_004459057.1|	-	0.13	12.1	0.0	0.42	10.5	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3124)
SLAC1	PF03595.12	gi|332797558|ref|YP_004459058.1|	-	4.2e-23	81.5	45.6	4.7e-23	81.3	31.6	1.0	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
DUF4138	PF13595.1	gi|332797559|ref|YP_004459059.1|	-	0.072	12.0	0.1	0.073	12.0	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4138)
YabP	PF07873.6	gi|332797559|ref|YP_004459059.1|	-	0.091	12.3	0.0	0.33	10.5	0.0	2.0	1	1	1	2	2	2	0	YabP	family
MFS_1	PF07690.11	gi|332797560|ref|YP_004459060.1|	-	2.9e-30	105.1	73.8	1.5e-25	89.6	32.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
AA_permease_2	PF13520.1	gi|332797562|ref|YP_004459062.1|	-	2e-28	99.1	52.9	2e-28	99.1	36.7	2.0	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332797562|ref|YP_004459062.1|	-	9e-21	73.7	54.2	1.3e-20	73.1	37.4	1.4	1	1	0	1	1	1	1	Amino	acid	permease
KaiC	PF06745.8	gi|332797563|ref|YP_004459063.1|	-	7.1e-84	280.4	0.1	1e-83	279.9	0.1	1.2	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|332797563|ref|YP_004459063.1|	-	2.9e-09	36.6	0.0	7.2e-09	35.3	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|332797563|ref|YP_004459063.1|	-	0.00075	19.3	0.0	0.0016	18.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|332797563|ref|YP_004459063.1|	-	0.0045	16.0	0.1	0.0045	16.0	0.0	1.9	2	1	1	3	3	3	1	Uncharacterized	conserved	protein	(DUF2075)
FtsK_SpoIIIE	PF01580.13	gi|332797563|ref|YP_004459063.1|	-	0.0057	16.1	0.1	0.55	9.6	0.0	2.6	2	1	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_19	PF13245.1	gi|332797563|ref|YP_004459063.1|	-	0.0077	15.9	0.1	0.022	14.5	0.1	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|332797563|ref|YP_004459063.1|	-	0.0092	16.1	0.1	0.02	15.0	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|332797563|ref|YP_004459063.1|	-	0.0098	14.2	0.0	0.014	13.7	0.0	1.2	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
T2SE	PF00437.15	gi|332797563|ref|YP_004459063.1|	-	0.034	13.0	0.0	0.076	11.9	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_16	PF13191.1	gi|332797563|ref|YP_004459063.1|	-	0.091	12.7	0.1	0.32	10.9	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|332797563|ref|YP_004459063.1|	-	0.13	11.6	0.1	0.26	10.6	0.1	1.5	1	1	0	1	1	1	0	AAA-like	domain
DUF973	PF06157.6	gi|332797564|ref|YP_004459064.1|	-	1.7e-70	237.2	30.3	3e-70	236.4	21.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Orbi_NS3	PF01616.11	gi|332797564|ref|YP_004459064.1|	-	0.18	10.7	1.9	0.2	10.6	0.2	1.8	2	0	0	2	2	2	0	Orbivirus	NS3
Glyco_hydro_15	PF00723.16	gi|332797565|ref|YP_004459065.1|	-	2e-54	184.8	0.0	1.2e-52	178.9	0.0	2.1	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
TPR_19	PF14559.1	gi|332797565|ref|YP_004459065.1|	-	0.00038	20.7	0.1	0.0015	18.7	0.0	2.0	2	0	0	2	2	2	1	Tetratricopeptide	repeat
DUF1237	PF06824.6	gi|332797565|ref|YP_004459065.1|	-	0.017	13.7	0.0	0.068	11.7	0.0	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1237)
TPR_4	PF07721.9	gi|332797565|ref|YP_004459065.1|	-	0.021	15.1	0.1	0.49	10.9	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Glyco_hydro_65m	PF03632.10	gi|332797565|ref|YP_004459065.1|	-	0.11	11.1	0.1	0.18	10.4	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	65	central	catalytic	domain
DUF3211	PF11485.3	gi|332797566|ref|YP_004459066.1|	-	4e-30	104.6	1.6	4.4e-30	104.5	1.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
MFS_1	PF07690.11	gi|332797567|ref|YP_004459067.1|	-	1.7e-18	66.4	46.5	1.7e-18	66.4	32.2	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332797567|ref|YP_004459067.1|	-	2.9e-14	52.5	33.6	2.9e-12	45.9	22.6	2.3	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
DUF1292	PF06949.6	gi|332797568|ref|YP_004459068.1|	-	0.018	15.3	0.0	0.021	15.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1292)
TctC	PF03401.9	gi|332797568|ref|YP_004459068.1|	-	0.12	11.2	0.0	0.12	11.2	0.0	1.0	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	family	receptor
EF-1_beta_acid	PF10587.4	gi|332797568|ref|YP_004459068.1|	-	0.52	10.4	2.8	1.2	9.3	1.9	1.6	1	1	0	1	1	1	0	Eukaryotic	elongation	factor	1	beta	central	acidic	region
Plasmid_stabil	PF05016.9	gi|332797569|ref|YP_004459069.1|	-	3.8e-05	24.0	0.1	4.7e-05	23.7	0.1	1.1	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
TFIID-18kDa	PF02269.11	gi|332797569|ref|YP_004459069.1|	-	0.14	11.9	0.9	0.5	10.2	0.4	1.9	1	1	1	2	2	2	0	Transcription	initiation	factor	IID,	18kD	subunit
SUR7	PF06687.7	gi|332797571|ref|YP_004459071.1|	-	0.018	14.5	1.4	0.024	14.1	1.0	1.1	1	0	0	1	1	1	0	SUR7/PalI	family
Dr_adhesin	PF12393.3	gi|332797571|ref|YP_004459071.1|	-	6.7	6.9	11.1	0.38	10.8	2.9	2.3	2	0	0	2	2	2	0	Dr	family	adhesin
SIR2	PF02146.12	gi|332797572|ref|YP_004459072.1|	-	5.4e-53	179.3	0.0	6.4e-53	179.1	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
XPG_I	PF00867.13	gi|332797572|ref|YP_004459072.1|	-	0.014	15.4	0.0	0.027	14.5	0.0	1.4	1	0	0	1	1	1	0	XPG	I-region
TPP_enzyme_M	PF00205.17	gi|332797572|ref|YP_004459072.1|	-	0.14	11.8	0.0	0.36	10.5	0.0	1.7	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
PIN	PF01850.16	gi|332797573|ref|YP_004459073.1|	-	0.0053	17.0	0.0	0.006	16.9	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
NTP_transf_2	PF01909.18	gi|332797574|ref|YP_004459074.1|	-	9.4e-11	41.9	0.2	1.5e-10	41.2	0.1	1.5	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|332797575|ref|YP_004459075.1|	-	5.9e-25	87.4	0.1	6.5e-25	87.3	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
oligo_HPY	PF08352.7	gi|332797575|ref|YP_004459075.1|	-	0.065	13.5	0.1	0.11	12.8	0.1	1.3	1	0	0	1	1	1	0	Oligopeptide/dipeptide	transporter,	C-terminal	region
PaREP1	PF05942.6	gi|332797576|ref|YP_004459076.1|	-	9.6e-27	93.1	1.2	1.2e-26	92.8	0.8	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332797576|ref|YP_004459076.1|	-	0.0044	16.9	0.2	0.0099	15.7	0.1	1.6	1	1	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|332797577|ref|YP_004459077.1|	-	2.1e-18	66.2	1.1	2.7e-18	65.8	0.8	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Spt20	PF12090.3	gi|332797577|ref|YP_004459077.1|	-	0.0036	16.6	0.5	0.0085	15.4	0.3	1.7	1	1	0	1	1	1	1	Spt20	family
HEPN	PF05168.9	gi|332797577|ref|YP_004459077.1|	-	0.12	12.2	1.6	0.34	10.8	1.1	1.8	1	1	0	1	1	1	0	HEPN	domain
AA_permease	PF00324.16	gi|332797578|ref|YP_004459078.1|	-	1.2e-12	46.9	46.4	3.9e-12	45.2	32.2	1.9	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|332797578|ref|YP_004459078.1|	-	6.1e-11	41.5	52.7	9.2e-11	40.9	36.5	1.3	1	0	0	1	1	1	1	Amino	acid	permease
Tox-WTIP	PF15654.1	gi|332797578|ref|YP_004459078.1|	-	0.089	12.4	1.8	0.47	10.0	1.3	2.3	1	1	0	1	1	1	0	Toxin	with	a	conserved	tryptophan	and	TIP	tripeptide	motif
OrfB_Zn_ribbon	PF07282.6	gi|332797579|ref|YP_004459079.1|	-	1.5e-19	69.4	1.1	4e-19	68.0	0.3	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|332797579|ref|YP_004459079.1|	-	2.1e-10	40.3	1.1	3.3e-10	39.7	0.5	1.5	1	1	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|332797579|ref|YP_004459079.1|	-	0.09	12.3	3.1	0.081	12.5	1.2	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
C1_1	PF00130.17	gi|332797579|ref|YP_004459079.1|	-	0.14	11.9	0.9	0.34	10.6	0.6	1.6	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DUF2935	PF11155.3	gi|332797581|ref|YP_004459081.1|	-	0.066	13.2	0.0	0.1	12.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
TM_helix	PF05552.7	gi|332797583|ref|YP_004459083.1|	-	1.1e-15	57.0	6.8	2.2e-10	40.0	1.0	4.4	6	0	0	6	6	6	2	Conserved	TM	helix
NDUF_B12	PF08122.7	gi|332797583|ref|YP_004459083.1|	-	3.9	7.2	6.1	2.7	7.8	0.0	3.0	3	1	0	3	3	3	0	NADH-ubiquinone	oxidoreductase	B12	subunit	family
Yip1	PF04893.12	gi|332797585|ref|YP_004459085.1|	-	0.0015	18.0	26.1	0.0015	18.0	18.1	1.5	1	1	0	1	1	1	1	Yip1	domain
Endonuc-BglII	PF09195.6	gi|332797587|ref|YP_004459087.1|	-	0.05	13.0	0.0	0.054	12.9	0.0	1.1	1	0	0	1	1	1	0	Restriction	endonuclease	BglII
Band_7	PF01145.20	gi|332797589|ref|YP_004459089.1|	-	1e-19	71.1	0.8	1.7e-19	70.4	0.6	1.4	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|332797589|ref|YP_004459089.1|	-	1.2e-11	44.5	0.1	3.3e-11	43.1	0.1	1.6	1	1	0	1	1	1	1	SPFH	domain-Band	7	family
HTH_3	PF01381.17	gi|332797590|ref|YP_004459090.1|	-	0.0045	16.8	0.0	0.01	15.6	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
DUF3834	PF12916.2	gi|332797590|ref|YP_004459090.1|	-	0.017	14.0	0.5	0.028	13.4	0.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3834)
PIG-S	PF10510.4	gi|332797590|ref|YP_004459090.1|	-	0.017	13.7	0.3	0.021	13.5	0.2	1.2	1	0	0	1	1	1	0	Phosphatidylinositol-glycan	biosynthesis	class	S	protein
HTH_20	PF12840.2	gi|332797591|ref|YP_004459091.1|	-	9.3e-08	31.7	0.0	2.7e-07	30.2	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|332797591|ref|YP_004459091.1|	-	9.8e-06	25.1	0.0	2.6e-05	23.7	0.0	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|332797591|ref|YP_004459091.1|	-	0.00029	20.1	0.0	0.00063	19.0	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF4098	PF13345.1	gi|332797591|ref|YP_004459091.1|	-	0.0005	19.9	5.2	0.0014	18.5	3.4	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4098)
DUF4097	PF13349.1	gi|332797591|ref|YP_004459091.1|	-	0.0018	17.8	1.9	0.011	15.3	0.3	2.8	1	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4097)
DUF2807	PF10988.3	gi|332797591|ref|YP_004459091.1|	-	0.0041	16.6	0.3	0.0095	15.4	0.2	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2807)
HTH_34	PF13601.1	gi|332797591|ref|YP_004459091.1|	-	0.011	15.7	0.0	0.15	12.1	0.0	2.4	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|332797591|ref|YP_004459091.1|	-	0.024	14.4	0.2	0.061	13.1	0.1	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF1540	PF07561.6	gi|332797592|ref|YP_004459092.1|	-	0.022	14.8	1.8	0.033	14.2	1.2	1.5	1	1	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1540)
PaREP1	PF05942.6	gi|332797593|ref|YP_004459093.1|	-	1.7e-17	63.2	1.4	2.5e-17	62.7	1.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332797593|ref|YP_004459093.1|	-	0.0011	18.8	3.5	0.0052	16.6	2.4	1.8	1	1	0	1	1	1	1	HEPN	domain
Speriolin_C	PF15059.1	gi|332797593|ref|YP_004459093.1|	-	0.096	12.7	0.0	0.15	12.0	0.0	1.3	1	0	0	1	1	1	0	Speriolin	C-terminus
DUF357	PF04010.8	gi|332797593|ref|YP_004459093.1|	-	0.13	11.9	0.3	0.49	10.1	0.0	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF357)
PaREP1	PF05942.6	gi|332797594|ref|YP_004459094.1|	-	3.9e-26	91.1	3.6	4.3e-26	91.0	2.5	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Baculo_Y142	PF04913.7	gi|332797595|ref|YP_004459095.1|	-	0.023	13.0	0.1	0.028	12.7	0.1	1.1	1	0	0	1	1	1	0	Baculovirus	Y142	protein
HEPN	PF05168.9	gi|332797596|ref|YP_004459096.1|	-	7.5e-10	38.7	6.1	8.7e-10	38.5	4.2	1.1	1	0	0	1	1	1	1	HEPN	domain
DUF2870	PF11069.3	gi|332797596|ref|YP_004459096.1|	-	0.012	15.6	0.5	0.019	15.0	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2870)
Anticodon_1	PF08264.8	gi|332797596|ref|YP_004459096.1|	-	0.031	14.0	2.4	0.54	9.9	0.0	2.0	1	1	1	2	2	2	0	Anticodon-binding	domain	of	tRNA
DUF2089	PF09862.4	gi|332797596|ref|YP_004459096.1|	-	0.052	13.3	1.1	0.4	10.4	0.8	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
DNA_photolyase	PF00875.13	gi|332797597|ref|YP_004459097.1|	-	0.006	16.3	2.9	0.15	11.7	0.2	2.3	1	1	1	2	2	2	1	DNA	photolyase
Mistic	PF11458.3	gi|332797597|ref|YP_004459097.1|	-	0.0086	16.4	3.8	0.45	10.9	0.6	2.5	2	0	0	2	2	2	1	Membrane-integrating	protein	Mistic
Cas_Cas2CT1978	PF09707.5	gi|332797597|ref|YP_004459097.1|	-	0.017	15.0	0.3	7.1	6.6	0.0	2.4	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_Cas2CT1978)
DUF1866	PF08952.6	gi|332797597|ref|YP_004459097.1|	-	0.027	14.0	3.0	3.4	7.1	0.1	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1866)
DUF1505	PF07403.6	gi|332797597|ref|YP_004459097.1|	-	0.041	13.8	4.6	3.6	7.5	1.6	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1505)
DUF1488	PF07369.6	gi|332797597|ref|YP_004459097.1|	-	0.077	12.8	0.0	0.27	11.0	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1488)
Integrin_B_tail	PF07965.7	gi|332797597|ref|YP_004459097.1|	-	0.31	11.4	5.7	2.8	8.4	1.3	2.4	1	1	0	2	2	2	0	Integrin	beta	tail	domain
DUF1904	PF08921.6	gi|332797597|ref|YP_004459097.1|	-	0.63	10.1	3.0	19	5.3	0.1	3.3	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF1904)
DUF2098	PF09871.4	gi|332797597|ref|YP_004459097.1|	-	1.1	9.2	6.6	4.1	7.3	0.1	3.0	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
EnY2	PF10163.4	gi|332797597|ref|YP_004459097.1|	-	1.7	8.6	7.2	17	5.4	0.6	3.6	2	1	1	3	3	3	0	Transcription	factor	e(y)2
LacI	PF00356.16	gi|332797597|ref|YP_004459097.1|	-	2.1	8.0	9.2	10	5.8	0.3	3.5	3	1	1	4	4	4	0	Bacterial	regulatory	proteins,	lacI	family
ACT	PF01842.20	gi|332797597|ref|YP_004459097.1|	-	2.4	7.7	5.3	11	5.6	0.5	2.6	2	0	0	2	2	2	0	ACT	domain
S-AdoMet_synt_N	PF00438.15	gi|332797597|ref|YP_004459097.1|	-	4.4	7.5	11.1	4.1	7.6	3.2	2.5	1	1	1	2	2	2	0	S-adenosylmethionine	synthetase,	N-terminal	domain
DZR	PF12773.2	gi|332797598|ref|YP_004459098.1|	-	1.4e-18	66.4	31.5	5.3e-10	38.9	3.0	2.2	1	1	2	3	3	3	3	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|332797598|ref|YP_004459098.1|	-	7.2e-15	53.9	24.1	9.9e-06	24.8	1.9	3.2	3	0	0	3	3	3	3	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332797598|ref|YP_004459098.1|	-	4.2e-14	51.2	20.8	7.7e-05	21.7	1.0	3.2	3	0	0	3	3	3	3	zinc-ribbon	domain
UPF0547	PF10571.4	gi|332797598|ref|YP_004459098.1|	-	1.1e-10	41.0	24.3	4.7e-05	22.9	2.4	3.9	3	2	0	3	3	3	3	Uncharacterised	protein	family	UPF0547
zf-RanBP	PF00641.13	gi|332797598|ref|YP_004459098.1|	-	1.6e-09	36.6	11.5	0.00031	19.7	0.1	3.2	3	0	0	3	3	3	2	Zn-finger	in	Ran	binding	protein	and	others
OrfB_Zn_ribbon	PF07282.6	gi|332797598|ref|YP_004459098.1|	-	4.5e-06	26.2	15.8	0.033	13.8	0.8	4.0	2	1	2	4	4	4	3	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|332797598|ref|YP_004459098.1|	-	5.8e-05	22.3	19.3	0.0053	16.0	0.8	4.4	3	2	0	3	3	3	2	TFIIB	zinc-binding
Prok-RING_1	PF14446.1	gi|332797598|ref|YP_004459098.1|	-	0.00026	20.6	13.2	0.0036	16.9	0.5	3.9	4	0	0	4	4	4	2	Prokaryotic	RING	finger	family	1
Nudix_N_2	PF14803.1	gi|332797598|ref|YP_004459098.1|	-	0.00029	20.4	21.4	0.31	10.7	0.1	6.1	6	0	0	6	6	6	2	Nudix	N-terminal
zf-tcix	PF14952.1	gi|332797598|ref|YP_004459098.1|	-	0.00044	19.5	23.4	0.0099	15.1	1.3	3.7	2	2	1	3	3	3	2	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-NADH-PPase	PF09297.6	gi|332797598|ref|YP_004459098.1|	-	0.019	14.4	17.2	8.6	5.9	0.0	5.9	6	0	0	6	6	6	0	NADH	pyrophosphatase	zinc	ribbon	domain
Spt4	PF06093.8	gi|332797598|ref|YP_004459098.1|	-	0.046	13.6	10.7	0.17	11.7	0.1	3.0	2	1	1	3	3	3	0	Spt4/RpoE2	zinc	finger
Ribosomal_L32p	PF01783.18	gi|332797598|ref|YP_004459098.1|	-	0.099	12.8	15.7	0.62	10.2	0.6	3.5	2	1	1	3	3	3	0	Ribosomal	L32p	protein	family
Auto_anti-p27	PF06677.7	gi|332797598|ref|YP_004459098.1|	-	0.14	11.9	20.6	4.7	7.0	0.0	5.2	5	0	0	5	5	5	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Rubredoxin	PF00301.15	gi|332797598|ref|YP_004459098.1|	-	0.16	11.8	25.9	21	5.0	0.1	6.0	4	1	0	4	4	4	0	Rubredoxin
PhnA_Zn_Ribbon	PF08274.7	gi|332797598|ref|YP_004459098.1|	-	0.22	11.3	15.0	1.1	9.0	0.3	4.4	4	0	0	4	4	4	0	PhnA	Zinc-Ribbon
DNA_RNApol_7kD	PF03604.8	gi|332797598|ref|YP_004459098.1|	-	0.28	10.6	22.0	0.63	9.5	1.3	4.6	3	2	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2318	PF10080.4	gi|332797598|ref|YP_004459098.1|	-	0.33	10.7	11.6	0.4	10.4	0.5	2.9	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2318)
Ribosomal_L37e	PF01907.14	gi|332797598|ref|YP_004459098.1|	-	0.35	10.6	20.1	0.28	11.0	0.4	4.0	2	2	1	3	3	3	0	Ribosomal	protein	L37e
NinF	PF05810.7	gi|332797598|ref|YP_004459098.1|	-	0.42	10.4	6.6	0.28	11.0	0.4	2.5	2	1	0	2	2	2	0	NinF	protein
RNA_POL_M_15KD	PF02150.11	gi|332797598|ref|YP_004459098.1|	-	0.79	9.4	0.1	0.79	9.4	0.0	5.1	2	2	2	4	4	4	0	RNA	polymerases	M/15	Kd	subunit
Zn-ribbon_8	PF09723.5	gi|332797598|ref|YP_004459098.1|	-	1.4	8.9	23.9	21	5.1	3.1	5.7	4	1	1	5	5	5	0	Zinc	ribbon	domain
zf-DHHC	PF01529.15	gi|332797598|ref|YP_004459098.1|	-	1.6	8.0	20.8	0.27	10.5	0.8	3.6	3	1	1	4	4	4	0	DHHC	palmitoyltransferase
HypA	PF01155.14	gi|332797598|ref|YP_004459098.1|	-	2.2	8.0	13.1	2.8	7.6	0.2	3.3	1	1	2	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
zf-UBP	PF02148.14	gi|332797598|ref|YP_004459098.1|	-	2.5	8.2	9.9	1.7	8.8	0.2	3.2	2	1	0	2	2	2	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
DUF2248	PF10005.4	gi|332797598|ref|YP_004459098.1|	-	3	6.6	4.6	7.4	5.3	0.5	2.1	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2248)
PHF5	PF03660.9	gi|332797598|ref|YP_004459098.1|	-	4.1	7.5	9.3	1.3	9.1	1.7	2.2	2	0	0	2	2	2	0	PHF5-like	protein
zinc_ribbon_4	PF13717.1	gi|332797598|ref|YP_004459098.1|	-	5.5	6.7	20.0	5.6	6.7	0.1	5.3	5	1	0	5	5	5	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332797598|ref|YP_004459098.1|	-	6	6.5	21.0	2.3	7.8	0.1	5.2	5	1	0	5	5	5	0	zinc-ribbon	domain
zf-Mss51	PF13824.1	gi|332797598|ref|YP_004459098.1|	-	7.8	6.4	21.6	2	8.3	1.4	3.8	2	1	1	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF1610	PF07754.6	gi|332797598|ref|YP_004459098.1|	-	9.1	6.5	31.2	1.2	9.3	0.9	5.9	6	0	0	6	6	6	0	Domain	of	unknown	function	(DUF1610)
Rieske	PF00355.21	gi|332797599|ref|YP_004459099.1|	-	2.3e-09	36.6	0.0	2.7e-09	36.4	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|332797599|ref|YP_004459099.1|	-	0.0011	18.6	0.0	0.0011	18.6	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Pro-kuma_activ	PF09286.6	gi|332797600|ref|YP_004459100.1|	-	6.4e-14	52.2	0.0	1.5e-13	50.9	0.0	1.6	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|332797600|ref|YP_004459100.1|	-	2.6e-08	33.3	1.9	6.2e-08	32.1	1.3	1.6	1	0	0	1	1	1	1	Subtilase	family
A2M_N	PF01835.14	gi|332797600|ref|YP_004459100.1|	-	6.8e-07	29.4	0.0	0.0011	19.1	0.0	3.6	2	2	1	3	3	3	2	MG2	domain
PASTA	PF03793.14	gi|332797600|ref|YP_004459100.1|	-	0.013	15.1	0.1	0.08	12.5	0.0	2.4	2	0	0	2	2	2	0	PASTA	domain
DUF350	PF03994.9	gi|332797601|ref|YP_004459101.1|	-	0.0012	18.5	0.5	0.0016	18.1	0.4	1.2	1	0	0	1	1	1	1	Domain	of	Unknown	Function	(DUF350)
RhodobacterPufX	PF11511.3	gi|332797601|ref|YP_004459101.1|	-	0.12	11.7	0.1	0.13	11.6	0.1	1.2	1	0	0	1	1	1	0	Intrinsic	membrane	protein	PufX
Sugar_tr	PF00083.19	gi|332797602|ref|YP_004459102.1|	-	1.2e-50	172.4	30.7	4.7e-50	170.4	21.3	1.7	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|332797602|ref|YP_004459102.1|	-	1.6e-39	135.5	39.7	4.1e-28	98.1	14.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|332797602|ref|YP_004459102.1|	-	9.2e-05	21.0	26.5	0.00029	19.3	1.3	3.2	2	1	1	3	3	3	2	MFS/sugar	transport	protein
DUF1228	PF06779.9	gi|332797602|ref|YP_004459102.1|	-	0.0081	16.1	0.4	0.0081	16.1	0.3	3.8	4	0	0	4	4	4	1	Protein	of	unknown	function	(DUF1228)
OATP	PF03137.15	gi|332797602|ref|YP_004459102.1|	-	0.11	10.4	8.9	0.02	12.9	1.1	2.3	1	1	1	2	2	2	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
MarR_2	PF12802.2	gi|332797603|ref|YP_004459103.1|	-	3.9e-10	39.2	0.0	6.3e-10	38.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|332797603|ref|YP_004459103.1|	-	5.5e-10	38.8	0.3	8.9e-10	38.1	0.1	1.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|332797603|ref|YP_004459103.1|	-	1.7e-06	27.6	0.3	2.7e-06	27.0	0.2	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|332797603|ref|YP_004459103.1|	-	3e-06	27.4	0.1	4.1e-06	27.0	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|332797603|ref|YP_004459103.1|	-	2.2e-05	23.9	0.9	2.6e-05	23.6	0.6	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|332797603|ref|YP_004459103.1|	-	4.8e-05	22.6	0.9	6.9e-05	22.1	0.6	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|332797603|ref|YP_004459103.1|	-	6.4e-05	22.6	0.0	9.7e-05	22.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797603|ref|YP_004459103.1|	-	0.00033	20.6	0.1	0.00051	20.0	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|332797603|ref|YP_004459103.1|	-	0.00038	20.0	1.2	0.00047	19.7	0.3	1.5	2	0	0	2	2	1	1	HTH	domain
HTH_DeoR	PF08220.7	gi|332797603|ref|YP_004459103.1|	-	0.0019	17.7	0.1	0.0034	16.8	0.1	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|332797603|ref|YP_004459103.1|	-	0.0021	17.9	0.0	0.0034	17.2	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Penicillinase_R	PF03965.11	gi|332797603|ref|YP_004459103.1|	-	0.0022	18.0	0.1	0.0027	17.7	0.1	1.3	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_5	PF01022.15	gi|332797603|ref|YP_004459103.1|	-	0.0032	17.1	0.9	0.0054	16.3	0.6	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|332797603|ref|YP_004459103.1|	-	0.0037	16.6	0.1	0.0073	15.7	0.0	1.5	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
Cullin	PF00888.17	gi|332797603|ref|YP_004459103.1|	-	0.0071	14.9	0.1	0.009	14.6	0.1	1.3	1	1	0	1	1	1	1	Cullin	family
HTH_IclR	PF09339.5	gi|332797603|ref|YP_004459103.1|	-	0.019	14.5	0.0	0.027	14.0	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DMA	PF03474.9	gi|332797603|ref|YP_004459103.1|	-	0.032	14.0	0.0	0.055	13.3	0.0	1.4	1	0	0	1	1	1	0	DMRTA	motif
HTH_38	PF13936.1	gi|332797603|ref|YP_004459103.1|	-	0.051	13.1	0.0	0.099	12.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|332797603|ref|YP_004459103.1|	-	0.06	13.0	0.0	0.11	12.2	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Rrf2	PF02082.15	gi|332797603|ref|YP_004459103.1|	-	0.089	12.9	0.1	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
FUR	PF01475.14	gi|332797603|ref|YP_004459103.1|	-	0.12	12.2	0.4	0.25	11.2	0.3	1.7	1	1	0	1	1	1	0	Ferric	uptake	regulator	family
DUF3895	PF13034.1	gi|332797603|ref|YP_004459103.1|	-	0.16	11.4	1.1	2.2	7.8	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3895)
TrmB	PF01978.14	gi|332797604|ref|YP_004459104.1|	-	1.5e-10	40.6	1.1	3.1e-10	39.5	0.2	1.8	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|332797604|ref|YP_004459104.1|	-	7.2e-08	31.9	0.0	1e-07	31.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|332797604|ref|YP_004459104.1|	-	7.2e-08	31.9	0.5	1.3e-07	31.1	0.3	1.4	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.17	gi|332797604|ref|YP_004459104.1|	-	1.4e-05	24.6	0.1	2.5e-05	23.8	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|332797604|ref|YP_004459104.1|	-	2.5e-05	23.5	0.8	4.5e-05	22.7	0.6	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.12	gi|332797604|ref|YP_004459104.1|	-	3.5e-05	23.2	0.2	4.4e-05	22.9	0.1	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
GntR	PF00392.16	gi|332797604|ref|YP_004459104.1|	-	5.1e-05	22.6	0.2	0.00011	21.5	0.1	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.14	gi|332797604|ref|YP_004459104.1|	-	6.1e-05	22.8	0.1	9.6e-05	22.2	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GerE	PF00196.14	gi|332797604|ref|YP_004459104.1|	-	0.00016	20.9	0.1	0.00073	18.8	0.1	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
Penicillinase_R	PF03965.11	gi|332797604|ref|YP_004459104.1|	-	0.0003	20.8	0.1	0.00044	20.3	0.1	1.3	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_20	PF12840.2	gi|332797604|ref|YP_004459104.1|	-	0.00046	19.9	0.0	0.00067	19.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|332797604|ref|YP_004459104.1|	-	0.00064	19.2	0.1	0.0012	18.3	0.0	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|332797604|ref|YP_004459104.1|	-	0.0013	18.3	0.0	0.0027	17.3	0.0	1.5	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
RuvB_C	PF05491.8	gi|332797604|ref|YP_004459104.1|	-	0.0026	17.3	0.0	0.0038	16.8	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
HTH_23	PF13384.1	gi|332797604|ref|YP_004459104.1|	-	0.003	17.1	0.0	0.0091	15.6	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
Rrf2	PF02082.15	gi|332797604|ref|YP_004459104.1|	-	0.0047	17.0	0.1	0.0092	16.0	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_28	PF13518.1	gi|332797604|ref|YP_004459104.1|	-	0.0055	16.6	0.0	0.0087	16.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|332797604|ref|YP_004459104.1|	-	0.011	16.0	0.0	0.018	15.3	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|332797604|ref|YP_004459104.1|	-	0.014	15.1	0.0	0.025	14.3	0.0	1.4	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|332797604|ref|YP_004459104.1|	-	0.015	14.9	0.2	0.027	14.1	0.2	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Dimerisation	PF08100.6	gi|332797604|ref|YP_004459104.1|	-	0.017	14.9	0.2	0.037	13.8	0.1	1.6	1	0	0	1	1	1	0	Dimerisation	domain
DDRGK	PF09756.4	gi|332797604|ref|YP_004459104.1|	-	0.021	14.2	0.0	0.034	13.5	0.0	1.3	1	0	0	1	1	1	0	DDRGK	domain
Sigma70_r4	PF04545.11	gi|332797604|ref|YP_004459104.1|	-	0.029	13.6	0.0	0.082	12.2	0.0	1.7	2	0	0	2	2	2	0	Sigma-70,	region	4
Phage_terminase	PF10668.4	gi|332797604|ref|YP_004459104.1|	-	0.035	13.8	0.1	0.076	12.8	0.0	1.6	1	0	0	1	1	1	0	Phage	terminase	small	subunit
HTH_29	PF13551.1	gi|332797604|ref|YP_004459104.1|	-	0.041	14.0	0.0	0.056	13.6	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_36	PF13730.1	gi|332797604|ref|YP_004459104.1|	-	0.046	13.8	0.8	0.084	13.0	0.1	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2089	PF09862.4	gi|332797604|ref|YP_004459104.1|	-	0.047	13.4	0.0	0.059	13.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
RPA_C	PF08784.6	gi|332797604|ref|YP_004459104.1|	-	0.062	13.7	0.1	0.22	11.9	0.0	1.8	1	1	1	2	2	2	0	Replication	protein	A	C	terminal
HTH_22	PF13309.1	gi|332797604|ref|YP_004459104.1|	-	0.074	12.8	0.1	0.18	11.5	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
FUR	PF01475.14	gi|332797604|ref|YP_004459104.1|	-	0.076	12.9	0.1	0.27	11.1	0.0	1.8	1	1	1	2	2	2	0	Ferric	uptake	regulator	family
Sigma70_r4_2	PF08281.7	gi|332797604|ref|YP_004459104.1|	-	0.089	12.2	0.1	0.29	10.6	0.0	1.9	2	0	0	2	2	1	0	Sigma-70,	region	4
HTH_AsnC-type	PF13404.1	gi|332797604|ref|YP_004459104.1|	-	0.097	12.2	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_7	PF02796.10	gi|332797604|ref|YP_004459104.1|	-	0.11	12.4	0.1	0.31	10.9	0.0	1.8	2	0	0	2	2	1	0	Helix-turn-helix	domain	of	resolvase
HTH_38	PF13936.1	gi|332797604|ref|YP_004459104.1|	-	0.11	12.0	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Bac_Ubq_Cox	PF01654.12	gi|332797605|ref|YP_004459105.1|	-	3.3e-68	230.0	22.6	5.8e-68	229.2	15.7	1.3	1	1	0	1	1	1	1	Bacterial	Cytochrome	Ubiquinol	Oxidase
B12D	PF06522.6	gi|332797605|ref|YP_004459105.1|	-	0.25	11.0	0.0	0.25	11.0	0.0	2.5	3	0	0	3	3	3	0	NADH-ubiquinone	reductase	complex	1	MLRQ	subunit
P12	PF12669.2	gi|332797605|ref|YP_004459105.1|	-	3	8.1	5.8	3.1	8.0	0.1	2.9	3	0	0	3	3	3	0	Virus	attachment	protein	p12	family
ABM	PF03992.11	gi|332797607|ref|YP_004459107.1|	-	9.2e-15	54.4	0.0	1.1e-14	54.2	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
SOR	PF07682.6	gi|332797607|ref|YP_004459107.1|	-	2.9e-05	22.8	0.5	0.014	14.0	0.1	2.0	1	1	1	2	2	2	2	Sulphur	oxygenase	reductase
DUF4188	PF13826.1	gi|332797607|ref|YP_004459107.1|	-	0.054	13.5	0.0	0.065	13.3	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4188)
Dna2	PF08696.6	gi|332797607|ref|YP_004459107.1|	-	0.1	11.8	0.0	0.19	11.0	0.0	1.4	2	0	0	2	2	2	0	DNA	replication	factor	Dna2
Adeno_E1B_19K	PF01691.11	gi|332797607|ref|YP_004459107.1|	-	0.13	11.5	0.0	0.2	10.9	0.0	1.3	1	0	0	1	1	1	0	Adenovirus	E1B	19K	protein	/	small	t-antigen
ESSS	PF10183.4	gi|332797608|ref|YP_004459108.1|	-	2.8	8.3	4.4	0.69	10.3	0.1	2.0	2	0	0	2	2	2	0	ESSS	subunit	of	NADH:ubiquinone	oxidoreductase	(complex	I)
MerC	PF03203.9	gi|332797608|ref|YP_004459108.1|	-	2.9	8.2	8.8	0.27	11.5	0.5	2.5	1	1	2	3	3	3	0	MerC	mercury	resistance	protein
Glyco_tranf_2_3	PF13641.1	gi|332797609|ref|YP_004459109.1|	-	6.8e-18	65.2	0.0	1e-17	64.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|332797609|ref|YP_004459109.1|	-	1.6e-13	50.6	0.0	3.8e-13	49.4	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|332797609|ref|YP_004459109.1|	-	1.8e-12	47.3	0.1	4e-12	46.2	0.1	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|332797609|ref|YP_004459109.1|	-	7.7e-12	44.8	0.0	2.1e-11	43.3	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
NTP_transf_2	PF01909.18	gi|332797610|ref|YP_004459110.1|	-	2.4e-10	40.5	4.8	9.4e-10	38.7	3.3	1.9	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|332797610|ref|YP_004459110.1|	-	8.7e-05	22.1	0.0	0.0028	17.2	0.0	2.0	2	0	0	2	2	2	2	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|332797611|ref|YP_004459111.1|	-	1.1e-19	70.4	0.4	1.3e-19	70.2	0.3	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF3912	PF13051.1	gi|332797611|ref|YP_004459111.1|	-	0.045	13.5	0.0	0.064	13.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3912)
TPR_10	PF13374.1	gi|332797611|ref|YP_004459111.1|	-	0.095	12.6	0.7	0.35	10.8	0.2	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
IF3_N	PF05198.11	gi|332797611|ref|YP_004459111.1|	-	2.6	8.0	7.4	43	4.1	1.7	3.1	2	1	1	3	3	3	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Peptidase_M1	PF01433.15	gi|332797612|ref|YP_004459112.1|	-	2.8e-48	164.9	3.8	7.1e-48	163.6	2.6	1.6	1	1	0	1	1	1	1	Peptidase	family	M1
HEAT_2	PF13646.1	gi|332797612|ref|YP_004459112.1|	-	7.9e-25	86.9	0.1	1.7e-08	34.6	0.0	3.9	1	1	3	4	4	4	4	HEAT	repeats
Peptidase_MA_2	PF13485.1	gi|332797612|ref|YP_004459112.1|	-	5.6e-17	61.9	2.1	1.1e-16	61.0	1.4	1.4	1	0	0	1	1	1	1	Peptidase	MA	superfamily
HEAT_PBS	PF03130.11	gi|332797612|ref|YP_004459112.1|	-	0.00014	22.0	0.0	37	5.1	0.0	6.0	8	0	0	8	8	8	0	PBS	lyase	HEAT-like	repeat
HEAT	PF02985.17	gi|332797612|ref|YP_004459112.1|	-	0.00043	20.1	0.0	8.5	6.7	0.0	4.8	4	0	0	4	4	4	1	HEAT	repeat
DUF1570	PF07607.6	gi|332797612|ref|YP_004459112.1|	-	0.019	14.9	0.1	0.047	13.6	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1570)
Peptidase_M61	PF05299.7	gi|332797612|ref|YP_004459112.1|	-	0.031	14.2	1.2	0.21	11.5	0.8	2.2	1	1	0	1	1	1	0	M61	glycyl	aminopeptidase
Baculo_PEP_C	PF04513.7	gi|332797613|ref|YP_004459113.1|	-	0.047	13.5	10.3	0.047	13.5	3.0	3.1	2	1	2	4	4	4	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
EFG_IV	PF03764.13	gi|332797613|ref|YP_004459113.1|	-	0.087	12.3	0.1	0.36	10.3	0.0	2.0	1	0	0	1	1	1	0	Elongation	factor	G,	domain	IV
Kinase-PPPase	PF03618.9	gi|332797613|ref|YP_004459113.1|	-	0.15	11.4	9.6	2.6	7.4	0.3	3.2	2	1	1	3	3	3	0	Kinase/pyrophosphorylase
DUF848	PF05852.6	gi|332797613|ref|YP_004459113.1|	-	2.7	7.8	17.3	0.83	9.4	4.4	2.7	2	0	0	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF1664	PF07889.7	gi|332797613|ref|YP_004459113.1|	-	5.2	6.8	18.2	3.1	7.6	3.7	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Nup54	PF13874.1	gi|332797613|ref|YP_004459113.1|	-	5.9	6.5	17.2	1.3	8.6	1.8	3.5	1	1	2	3	3	3	0	Nucleoporin	complex	subunit	54
RGS-like	PF09128.6	gi|332797613|ref|YP_004459113.1|	-	6	6.3	11.7	49	3.3	8.0	2.2	1	1	0	1	1	1	0	Regulator	of	G	protein	signalling-like	domain
GLE1	PF07817.8	gi|332797613|ref|YP_004459113.1|	-	9.5	5.0	16.4	5.8	5.7	3.5	2.6	1	1	1	2	2	2	0	GLE1-like	protein
HTH_34	PF13601.1	gi|332797614|ref|YP_004459114.1|	-	0.0001	22.2	0.2	0.00021	21.2	0.1	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
FeoC	PF09012.5	gi|332797614|ref|YP_004459114.1|	-	0.00033	20.3	1.2	0.00054	19.6	0.0	2.0	3	0	0	3	3	3	1	FeoC	like	transcriptional	regulator
Macoilin	PF09726.4	gi|332797614|ref|YP_004459114.1|	-	0.01	14.1	1.2	0.013	13.8	0.9	1.0	1	0	0	1	1	1	0	Transmembrane	protein
ATG16	PF08614.6	gi|332797614|ref|YP_004459114.1|	-	0.048	13.4	3.3	0.052	13.3	1.4	1.5	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
PepSY_2	PF13670.1	gi|332797614|ref|YP_004459114.1|	-	0.053	13.4	0.0	0.15	11.9	0.0	1.8	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
FumaraseC_C	PF10415.4	gi|332797614|ref|YP_004459114.1|	-	0.074	13.1	0.2	0.8	9.8	0.1	2.2	2	0	0	2	2	2	0	Fumarase	C	C-terminus
MarR	PF01047.17	gi|332797614|ref|YP_004459114.1|	-	0.12	12.1	0.0	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	MarR	family
CPDase	PF07823.6	gi|332797614|ref|YP_004459114.1|	-	0.12	11.8	0.1	0.22	10.9	0.1	1.4	2	0	0	2	2	2	0	Cyclic	phosphodiesterase-like	protein
HTH_19	PF12844.2	gi|332797614|ref|YP_004459114.1|	-	0.17	11.9	5.2	0.49	10.4	0.0	2.8	2	1	0	2	2	2	0	Helix-turn-helix	domain
DASH_Dad3	PF08656.5	gi|332797614|ref|YP_004459114.1|	-	0.49	10.1	4.6	6.3	6.5	1.8	2.9	2	1	0	2	2	2	0	DASH	complex	subunit	Dad3
DUF1319	PF07028.6	gi|332797614|ref|YP_004459114.1|	-	0.57	10.3	4.7	1.5	9.0	3.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
AAA_18	PF13238.1	gi|332797615|ref|YP_004459115.1|	-	6.5e-05	23.2	0.6	6.5e-05	23.2	0.4	2.8	3	1	0	3	3	2	1	AAA	domain
AAA_17	PF13207.1	gi|332797615|ref|YP_004459115.1|	-	9.7e-05	23.1	0.8	0.0013	19.5	0.3	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|332797615|ref|YP_004459115.1|	-	0.0016	18.6	0.7	0.0099	16.0	0.0	2.6	4	0	0	4	4	4	1	AAA	domain
AAA_14	PF13173.1	gi|332797615|ref|YP_004459115.1|	-	0.0016	18.3	1.0	0.022	14.6	0.1	3.0	3	0	0	3	3	3	1	AAA	domain
Img2	PF05046.9	gi|332797615|ref|YP_004459115.1|	-	0.0019	18.3	1.2	0.41	10.8	0.0	2.7	2	0	0	2	2	2	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
MCM	PF00493.18	gi|332797615|ref|YP_004459115.1|	-	0.0025	16.6	0.1	0.0067	15.2	0.0	1.7	2	0	0	2	2	2	1	MCM2/3/5	family
NB-ARC	PF00931.17	gi|332797615|ref|YP_004459115.1|	-	0.0032	16.3	0.3	0.026	13.3	0.0	2.4	2	0	0	2	2	2	1	NB-ARC	domain
CTK3	PF12243.3	gi|332797615|ref|YP_004459115.1|	-	0.0035	16.9	0.5	0.011	15.4	0.3	1.8	1	0	0	1	1	1	1	CTD	kinase	subunit	gamma	CTK3
AAA_16	PF13191.1	gi|332797615|ref|YP_004459115.1|	-	0.0039	17.1	0.0	0.029	14.3	0.0	2.4	3	1	0	3	3	3	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|332797615|ref|YP_004459115.1|	-	0.0075	16.0	0.0	0.018	14.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_11	PF13086.1	gi|332797615|ref|YP_004459115.1|	-	0.011	15.3	2.1	0.073	12.6	1.4	2.3	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|332797615|ref|YP_004459115.1|	-	0.011	15.4	0.7	0.044	13.4	0.0	2.3	3	0	0	3	3	3	0	NTPase
ABC_tran	PF00005.22	gi|332797615|ref|YP_004459115.1|	-	0.012	15.8	0.8	0.052	13.8	0.0	2.3	2	1	0	2	2	2	0	ABC	transporter
DUF258	PF03193.11	gi|332797615|ref|YP_004459115.1|	-	0.014	14.6	0.0	0.032	13.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
OST-HTH	PF12872.2	gi|332797615|ref|YP_004459115.1|	-	0.017	14.9	0.9	0.79	9.6	0.0	3.4	4	0	0	4	4	4	0	OST-HTH/LOTUS	domain
AAA_24	PF13479.1	gi|332797615|ref|YP_004459115.1|	-	0.018	14.6	0.0	0.042	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|332797615|ref|YP_004459115.1|	-	0.026	14.7	0.4	0.12	12.5	0.1	2.4	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|332797615|ref|YP_004459115.1|	-	0.03	13.8	0.0	0.054	13.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|332797615|ref|YP_004459115.1|	-	0.048	13.3	0.2	0.18	11.4	0.0	2.1	3	0	0	3	3	3	0	NACHT	domain
RNA_helicase	PF00910.17	gi|332797615|ref|YP_004459115.1|	-	0.063	13.4	0.0	0.25	11.5	0.0	2.0	2	0	0	2	2	1	0	RNA	helicase
Fib_alpha	PF08702.5	gi|332797615|ref|YP_004459115.1|	-	0.2	11.7	6.3	0.081	13.0	0.6	2.6	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
PaREP1	PF05942.6	gi|332797616|ref|YP_004459116.1|	-	5.2e-05	23.0	0.2	0.00011	22.0	0.2	1.6	1	1	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
AAA_14	PF13173.1	gi|332797617|ref|YP_004459117.1|	-	7.4e-29	100.2	1.7	2e-28	98.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|332797617|ref|YP_004459117.1|	-	3e-12	46.5	0.4	3.5e-11	43.1	0.0	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4143)
PCI	PF01399.22	gi|332797617|ref|YP_004459117.1|	-	0.0047	17.2	0.2	0.012	15.9	0.1	1.7	1	0	0	1	1	1	1	PCI	domain
DUF1953	PF09196.5	gi|332797617|ref|YP_004459117.1|	-	0.069	12.8	0.8	0.2	11.4	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1953)
AAA_29	PF13555.1	gi|332797617|ref|YP_004459117.1|	-	0.17	11.4	0.1	0.54	9.8	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
DUF4441	PF14536.1	gi|332797617|ref|YP_004459117.1|	-	1.3	9.0	0.0	1.3	9.0	0.0	3.6	4	1	1	5	5	5	0	Domain	of	unknown	function	(DUF4441)
NTP_transf_2	PF01909.18	gi|332797618|ref|YP_004459118.1|	-	4.3e-11	43.0	0.6	6.8e-11	42.3	0.1	1.6	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|332797618|ref|YP_004459118.1|	-	0.0008	19.4	0.0	0.00091	19.2	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
MAGSP	PF03082.9	gi|332797618|ref|YP_004459118.1|	-	0.042	13.2	0.0	0.047	13.0	0.0	1.1	1	0	0	1	1	1	0	Male	accessory	gland	secretory	protein
DDE_3	PF13358.1	gi|332797618|ref|YP_004459118.1|	-	0.12	12.1	0.0	0.18	11.5	0.0	1.3	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
HEPN	PF05168.9	gi|332797619|ref|YP_004459119.1|	-	1.2e-10	41.3	1.2	1.3e-10	41.2	0.8	1.0	1	0	0	1	1	1	1	HEPN	domain
TPR_11	PF13414.1	gi|332797619|ref|YP_004459119.1|	-	0.033	13.8	1.7	0.038	13.6	1.2	1.1	1	0	0	1	1	1	0	TPR	repeat
TPR_2	PF07719.12	gi|332797619|ref|YP_004459119.1|	-	0.064	13.2	0.5	0.096	12.6	0.3	1.5	1	1	0	1	1	1	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|332797619|ref|YP_004459119.1|	-	0.082	13.0	1.3	0.097	12.8	0.9	1.1	1	0	0	1	1	1	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_8	PF13181.1	gi|332797619|ref|YP_004459119.1|	-	0.15	11.9	0.9	0.26	11.1	0.6	1.5	1	1	0	1	1	1	0	Tetratricopeptide	repeat
TPP_enzyme_C	PF02775.16	gi|332797620|ref|YP_004459120.1|	-	1.7e-18	66.6	0.1	2.3e-18	66.2	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|332797620|ref|YP_004459120.1|	-	0.0011	17.9	0.0	0.0017	17.3	0.0	1.2	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|332797620|ref|YP_004459120.1|	-	0.0021	16.8	0.0	0.0027	16.4	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
POR_N	PF01855.14	gi|332797621|ref|YP_004459121.1|	-	1.6e-71	240.4	0.2	2e-71	240.1	0.2	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|332797621|ref|YP_004459121.1|	-	1.3e-06	28.3	0.0	3.3e-06	27.0	0.0	1.7	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
Fer4	PF00037.22	gi|332797622|ref|YP_004459122.1|	-	5.9e-16	57.3	14.5	2e-08	33.4	2.6	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|332797622|ref|YP_004459122.1|	-	1.5e-11	43.5	14.2	3.5e-06	26.6	1.8	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|332797622|ref|YP_004459122.1|	-	3.1e-11	42.8	22.9	1.1e-07	31.5	8.8	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797622|ref|YP_004459122.1|	-	5.7e-11	42.6	9.3	8.6e-11	42.0	6.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797622|ref|YP_004459122.1|	-	7.6e-11	41.2	12.6	3.1e-06	26.7	1.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|332797622|ref|YP_004459122.1|	-	1.7e-10	40.5	8.9	2.4e-10	40.1	6.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797622|ref|YP_004459122.1|	-	1.5e-08	34.7	11.2	2.1e-08	34.2	7.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332797622|ref|YP_004459122.1|	-	6.1e-08	33.2	8.8	0.00078	20.1	1.9	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|332797622|ref|YP_004459122.1|	-	1.5e-07	31.1	12.6	0.00067	19.7	0.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332797622|ref|YP_004459122.1|	-	2e-06	28.0	6.6	0.0023	18.2	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|332797622|ref|YP_004459122.1|	-	9.8e-06	26.0	8.2	0.0012	19.3	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|332797622|ref|YP_004459122.1|	-	7.5e-05	23.0	7.2	0.042	14.2	1.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332797622|ref|YP_004459122.1|	-	0.00011	22.2	11.5	0.017	15.1	1.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332797622|ref|YP_004459122.1|	-	0.00034	20.9	10.5	0.099	13.0	1.0	2.1	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|332797622|ref|YP_004459122.1|	-	0.00078	19.8	17.4	0.12	12.9	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
C1_1	PF00130.17	gi|332797622|ref|YP_004459122.1|	-	0.6	9.8	5.1	2	8.2	0.3	2.1	2	0	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
POR	PF01558.13	gi|332797623|ref|YP_004459123.1|	-	1.1e-38	132.7	0.1	1.4e-38	132.5	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
AA_permease	PF00324.16	gi|332797624|ref|YP_004459124.1|	-	2.2e-22	79.0	49.0	3e-22	78.6	34.0	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|332797624|ref|YP_004459124.1|	-	3.2e-17	62.1	52.3	6.6e-17	61.1	36.3	1.3	1	1	0	1	1	1	1	Amino	acid	permease
MFS_1	PF07690.11	gi|332797625|ref|YP_004459125.1|	-	2e-55	187.9	46.2	2e-55	187.9	32.0	2.1	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332797625|ref|YP_004459125.1|	-	2.1e-11	43.1	37.1	1.4e-08	33.8	8.8	2.8	2	1	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|332797625|ref|YP_004459125.1|	-	0.066	11.3	12.8	0.08	11.0	4.1	2.3	2	0	0	2	2	2	0	Transmembrane	secretion	effector
FAD_binding_4	PF01565.18	gi|332797626|ref|YP_004459126.1|	-	1.1e-45	154.5	0.0	3.8e-45	152.7	0.0	1.9	2	0	0	2	2	2	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|332797626|ref|YP_004459126.1|	-	2.3e-44	151.5	0.0	3.1e-44	151.1	0.0	1.1	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
Thermopsin	PF05317.6	gi|332797628|ref|YP_004459128.1|	-	8.1e-60	201.9	9.5	8.1e-60	201.9	6.6	2.4	3	0	0	3	3	3	1	Thermopsin
DUF4215	PF13948.1	gi|332797628|ref|YP_004459128.1|	-	3.6	7.8	9.5	0.53	10.5	1.5	3.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4215)
DUF91	PF01939.11	gi|332797629|ref|YP_004459129.1|	-	1.3e-54	184.7	0.0	1.6e-54	184.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
Cas_Cas4	PF01930.12	gi|332797629|ref|YP_004459129.1|	-	0.0085	16.0	0.1	0.1	12.4	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF83
DUF4162	PF13732.1	gi|332797630|ref|YP_004459130.1|	-	0.32	11.5	4.8	1.7	9.1	0.5	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4162)
ABC_tran	PF00005.22	gi|332797632|ref|YP_004459132.1|	-	1.1e-28	100.1	0.0	1.6e-28	99.6	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797632|ref|YP_004459132.1|	-	1.6e-12	48.0	0.2	2.3e-05	24.5	0.1	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|332797632|ref|YP_004459132.1|	-	8.8e-05	21.7	0.3	0.013	14.6	0.3	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|332797632|ref|YP_004459132.1|	-	0.00037	19.8	1.2	0.1	11.7	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|332797632|ref|YP_004459132.1|	-	0.001	18.5	0.0	0.0019	17.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|332797632|ref|YP_004459132.1|	-	0.0057	17.0	0.7	0.0099	16.2	0.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|332797632|ref|YP_004459132.1|	-	0.011	15.3	0.1	0.027	14.0	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|332797632|ref|YP_004459132.1|	-	0.017	15.3	0.0	0.025	14.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|332797632|ref|YP_004459132.1|	-	0.05	13.4	0.1	0.16	11.7	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_17	PF13207.1	gi|332797632|ref|YP_004459132.1|	-	0.058	14.2	0.2	0.13	13.0	0.1	1.8	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|332797632|ref|YP_004459132.1|	-	0.059	13.5	0.5	0.14	12.4	0.2	1.9	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_10	PF12846.2	gi|332797632|ref|YP_004459132.1|	-	0.063	12.7	0.0	0.083	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_5	PF07728.9	gi|332797632|ref|YP_004459132.1|	-	0.079	12.6	0.5	0.32	10.7	0.1	2.0	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Glyco_hydro_12	PF01670.11	gi|332797633|ref|YP_004459133.1|	-	0.0017	18.1	0.4	0.0019	17.9	0.3	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	12
Fer4	PF00037.22	gi|332797634|ref|YP_004459134.1|	-	1.6e-14	52.7	13.3	1.4e-07	30.8	3.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|332797634|ref|YP_004459134.1|	-	1.3e-10	41.3	6.7	1.8e-10	40.9	4.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332797634|ref|YP_004459134.1|	-	3.1e-10	39.4	14.1	3.1e-06	26.8	4.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|332797634|ref|YP_004459134.1|	-	3.7e-10	40.0	6.6	5.6e-10	39.4	4.6	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332797634|ref|YP_004459134.1|	-	2.5e-09	36.7	18.9	3.7e-07	29.8	5.4	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332797634|ref|YP_004459134.1|	-	8.9e-09	35.0	5.6	1.2e-08	34.7	3.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332797634|ref|YP_004459134.1|	-	1.3e-07	31.5	9.9	8.7e-06	25.6	4.6	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797634|ref|YP_004459134.1|	-	2.4e-07	30.2	11.4	0.0021	17.8	2.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|332797634|ref|YP_004459134.1|	-	6.2e-06	26.1	8.3	0.017	15.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332797634|ref|YP_004459134.1|	-	1e-05	25.8	3.2	0.0041	17.5	0.7	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332797634|ref|YP_004459134.1|	-	1.1e-05	25.6	14.6	0.0077	16.7	4.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|332797634|ref|YP_004459134.1|	-	1.2e-05	25.5	0.5	0.15	12.4	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|332797634|ref|YP_004459134.1|	-	4.8e-05	23.8	9.6	0.035	14.6	0.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|332797634|ref|YP_004459134.1|	-	9.8e-05	22.6	9.2	0.042	14.2	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|332797634|ref|YP_004459134.1|	-	0.00013	22.6	18.7	0.0066	17.1	6.0	2.5	1	1	2	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_11	PF13247.1	gi|332797634|ref|YP_004459134.1|	-	0.066	13.0	3.1	0.12	12.2	2.1	1.4	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
CbiZ	PF01955.13	gi|332797635|ref|YP_004459135.1|	-	5.1e-26	91.6	0.0	6e-26	91.4	0.0	1.0	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
TrmB	PF01978.14	gi|332797636|ref|YP_004459136.1|	-	7.7e-14	51.1	0.0	1e-13	50.7	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|332797636|ref|YP_004459136.1|	-	2.7e-09	36.5	0.0	4.1e-09	35.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|332797636|ref|YP_004459136.1|	-	1.1e-08	34.6	0.0	1.6e-08	34.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|332797636|ref|YP_004459136.1|	-	1.1e-08	34.2	0.1	2e-08	33.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.12	gi|332797636|ref|YP_004459136.1|	-	8.2e-07	28.4	0.0	1e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|332797636|ref|YP_004459136.1|	-	1.7e-05	24.4	0.0	2.7e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|332797636|ref|YP_004459136.1|	-	0.00019	21.7	0.0	0.00032	20.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_AsnC-type	PF13404.1	gi|332797636|ref|YP_004459136.1|	-	0.00021	20.7	0.0	0.00034	20.0	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
DUF4423	PF14394.1	gi|332797636|ref|YP_004459136.1|	-	0.00056	19.4	0.0	0.00059	19.4	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Mga	PF05043.8	gi|332797636|ref|YP_004459136.1|	-	0.00071	19.8	0.1	0.0023	18.1	0.0	1.8	2	0	0	2	2	2	1	Mga	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|332797636|ref|YP_004459136.1|	-	0.00073	19.4	0.2	0.0017	18.2	0.0	1.7	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GntR	PF00392.16	gi|332797636|ref|YP_004459136.1|	-	0.00082	18.7	0.0	0.0014	18.0	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|332797636|ref|YP_004459136.1|	-	0.0011	18.6	0.0	0.0018	18.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|332797636|ref|YP_004459136.1|	-	0.0027	17.8	0.0	0.0032	17.6	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_IclR	PF09339.5	gi|332797636|ref|YP_004459136.1|	-	0.0059	16.1	0.0	0.0095	15.5	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797636|ref|YP_004459136.1|	-	0.008	16.1	0.0	0.012	15.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2250	PF10007.4	gi|332797636|ref|YP_004459136.1|	-	0.0084	16.0	0.0	0.013	15.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_9	PF08221.6	gi|332797636|ref|YP_004459136.1|	-	0.021	14.6	0.1	0.045	13.6	0.0	1.5	2	0	0	2	2	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_11	PF08279.7	gi|332797636|ref|YP_004459136.1|	-	0.032	13.8	0.0	0.054	13.1	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
z-alpha	PF02295.12	gi|332797636|ref|YP_004459136.1|	-	0.04	13.6	0.1	0.062	13.0	0.1	1.2	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
FeoC	PF09012.5	gi|332797636|ref|YP_004459136.1|	-	0.077	12.7	0.1	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_36	PF13730.1	gi|332797636|ref|YP_004459136.1|	-	0.14	12.2	1.4	1	9.5	1.0	2.2	1	1	0	1	1	1	0	Helix-turn-helix	domain
zf-ribbon_3	PF13248.1	gi|332797637|ref|YP_004459137.1|	-	3.5e-16	57.8	10.2	1.8e-08	33.3	1.5	2.1	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332797637|ref|YP_004459137.1|	-	2.5e-15	55.4	7.6	6.6e-09	34.9	1.4	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|332797637|ref|YP_004459137.1|	-	7.2e-15	54.5	17.4	1.7e-10	40.5	5.4	1.9	1	1	1	2	2	2	2	Double	zinc	ribbon
UPF0547	PF10571.4	gi|332797637|ref|YP_004459137.1|	-	2.8e-05	23.6	9.3	0.0045	16.6	1.7	2.3	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.6	gi|332797637|ref|YP_004459137.1|	-	0.00033	20.2	4.9	0.17	11.5	0.3	2.3	2	0	0	2	2	2	2	Putative	transposase	DNA-binding	domain
zf-DHHC	PF01529.15	gi|332797637|ref|YP_004459137.1|	-	0.0014	18.0	3.2	0.036	13.4	0.6	2.0	2	0	0	2	2	2	1	DHHC	palmitoyltransferase
DUF35_N	PF12172.3	gi|332797637|ref|YP_004459137.1|	-	0.0015	18.3	7.1	0.05	13.5	0.8	2.2	2	0	0	2	2	2	2	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-RanBP	PF00641.13	gi|332797637|ref|YP_004459137.1|	-	0.002	17.1	7.2	0.068	12.2	0.6	2.7	2	1	0	2	2	2	2	Zn-finger	in	Ran	binding	protein	and	others
NinF	PF05810.7	gi|332797637|ref|YP_004459137.1|	-	0.0037	17.0	4.4	0.16	11.7	0.2	2.2	2	0	0	2	2	2	1	NinF	protein
Prok-RING_1	PF14446.1	gi|332797637|ref|YP_004459137.1|	-	0.0045	16.7	11.0	0.067	12.9	0.7	2.7	2	1	0	2	2	2	2	Prokaryotic	RING	finger	family	1
A2L_zn_ribbon	PF08792.5	gi|332797637|ref|YP_004459137.1|	-	0.04	13.3	9.7	6.2	6.4	0.1	4.1	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
zinc-ribbons_6	PF07191.7	gi|332797637|ref|YP_004459137.1|	-	0.064	13.0	7.9	0.53	10.1	0.3	2.4	2	1	0	2	2	2	0	zinc-ribbons
zf-IS66	PF13005.2	gi|332797637|ref|YP_004459137.1|	-	0.075	13.0	15.5	1.6	8.7	0.4	4.2	3	1	1	4	4	4	0	zinc-finger	binding	domain	of	transposase	IS66
Nudix_N_2	PF14803.1	gi|332797637|ref|YP_004459137.1|	-	0.082	12.6	11.0	2	8.1	0.1	4.1	4	0	0	4	4	4	0	Nudix	N-terminal
PHF5	PF03660.9	gi|332797637|ref|YP_004459137.1|	-	0.083	12.9	2.5	1.4	8.9	0.1	2.1	1	1	0	2	2	2	0	PHF5-like	protein
DUF4187	PF13821.1	gi|332797637|ref|YP_004459137.1|	-	0.1	12.1	0.7	6	6.5	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
zf-MYND	PF01753.13	gi|332797637|ref|YP_004459137.1|	-	0.2	11.5	4.5	1.1	9.2	0.5	2.3	2	1	0	2	2	2	0	MYND	finger
DUF1610	PF07754.6	gi|332797637|ref|YP_004459137.1|	-	0.2	11.7	14.6	2.9	8.1	1.5	4.1	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
zf-tcix	PF14952.1	gi|332797637|ref|YP_004459137.1|	-	0.21	10.9	8.4	0.15	11.3	0.3	2.8	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-C4_Topoisom	PF01396.14	gi|332797637|ref|YP_004459137.1|	-	0.28	10.7	9.7	5.8	6.4	0.2	4.0	4	0	0	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-ISL3	PF14690.1	gi|332797637|ref|YP_004459137.1|	-	0.29	11.1	14.1	6.8	6.8	0.3	4.3	3	1	1	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn-ribbon_8	PF09723.5	gi|332797637|ref|YP_004459137.1|	-	0.33	10.9	14.0	3.7	7.5	0.2	4.1	2	2	2	4	4	4	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|332797637|ref|YP_004459137.1|	-	0.36	11.1	10.8	3.2	8.1	2.2	3.5	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
YhfH	PF14149.1	gi|332797637|ref|YP_004459137.1|	-	0.44	10.3	8.8	2.3	8.0	0.1	3.9	4	0	0	4	4	4	0	YhfH-like	protein
FYDLN_acid	PF09538.5	gi|332797637|ref|YP_004459137.1|	-	0.51	10.9	3.3	22	5.6	0.1	2.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(FYDLN_acid)
PhnA_Zn_Ribbon	PF08274.7	gi|332797637|ref|YP_004459137.1|	-	0.81	9.5	5.7	2.9	7.7	0.1	3.4	3	1	0	3	3	3	0	PhnA	Zinc-Ribbon
zf-C3HC4_3	PF13920.1	gi|332797637|ref|YP_004459137.1|	-	1	9.0	10.6	2.3	7.9	0.9	2.8	2	1	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
ADK_lid	PF05191.9	gi|332797637|ref|YP_004459137.1|	-	1	9.0	12.0	16	5.2	2.0	4.2	3	1	0	3	3	3	0	Adenylate	kinase,	active	site	lid
DUF2296	PF10058.4	gi|332797637|ref|YP_004459137.1|	-	1.3	8.8	5.2	4.9	6.9	0.1	3.4	4	0	0	4	4	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DNA_RNApol_7kD	PF03604.8	gi|332797637|ref|YP_004459137.1|	-	1.5	8.3	10.6	15	5.1	1.9	3.7	3	1	1	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-HYPF	PF07503.7	gi|332797637|ref|YP_004459137.1|	-	1.6	8.1	13.2	2.4	7.6	0.5	3.9	4	0	0	4	4	4	0	HypF	finger
zf-dskA_traR	PF01258.12	gi|332797637|ref|YP_004459137.1|	-	1.8	8.3	9.4	3.6	7.4	0.0	3.8	3	1	0	3	3	3	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF164	PF02591.10	gi|332797637|ref|YP_004459137.1|	-	2.1	8.2	10.3	11	5.9	0.1	4.0	3	1	2	5	5	5	0	Putative	zinc	ribbon	domain
zf-C2HC5	PF06221.8	gi|332797637|ref|YP_004459137.1|	-	2.1	8.1	10.0	3	7.6	1.5	3.2	2	2	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
HypA	PF01155.14	gi|332797637|ref|YP_004459137.1|	-	2.4	7.8	5.5	2.5	7.7	1.0	2.4	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
Amnionless	PF14828.1	gi|332797637|ref|YP_004459137.1|	-	2.6	6.4	8.0	0.083	11.3	0.5	1.8	1	1	1	2	2	2	0	Amnionless
zf-FCS	PF06467.9	gi|332797637|ref|YP_004459137.1|	-	2.9	7.6	9.1	4.9	6.8	0.1	3.7	2	2	2	4	4	4	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2116	PF09889.4	gi|332797637|ref|YP_004459137.1|	-	3.3	7.5	8.2	6.7	6.5	0.5	2.8	2	2	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Sgf11	PF08209.6	gi|332797637|ref|YP_004459137.1|	-	3.7	6.9	8.8	3.3	7.0	0.1	3.6	4	0	0	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
Cys_rich_CPXG	PF14255.1	gi|332797637|ref|YP_004459137.1|	-	6.4	6.6	12.1	28	4.6	0.2	3.9	3	1	1	4	4	4	0	Cysteine-rich	CPXCG
zf-NADH-PPase	PF09297.6	gi|332797637|ref|YP_004459137.1|	-	6.9	6.2	11.6	4	7.0	0.2	3.9	3	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
Ribosomal_L32p	PF01783.18	gi|332797637|ref|YP_004459137.1|	-	7	6.9	9.9	2.5	8.3	1.9	3.0	2	2	0	2	2	2	0	Ribosomal	L32p	protein	family
AIM24	PF01987.12	gi|332797638|ref|YP_004459138.1|	-	1.3e-42	145.6	1.7	1.5e-42	145.4	1.2	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
Acetyltransf_1	PF00583.19	gi|332797639|ref|YP_004459139.1|	-	6e-13	48.6	0.0	7.8e-13	48.2	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|332797639|ref|YP_004459139.1|	-	1.4e-10	41.1	0.0	1.9e-10	40.7	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|332797639|ref|YP_004459139.1|	-	3e-07	30.5	0.0	4e-07	30.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|332797639|ref|YP_004459139.1|	-	4.2e-07	29.6	0.0	5.6e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_CG	PF14542.1	gi|332797639|ref|YP_004459139.1|	-	0.0028	17.4	0.0	0.0044	16.8	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.1	gi|332797639|ref|YP_004459139.1|	-	0.0052	16.9	0.0	0.0065	16.6	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|332797639|ref|YP_004459139.1|	-	0.071	12.9	0.0	0.12	12.2	0.0	1.7	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
PaREP1	PF05942.6	gi|332797641|ref|YP_004459141.1|	-	9.2e-19	67.4	0.0	1.5e-18	66.6	0.0	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF4143	PF13635.1	gi|332797642|ref|YP_004459142.1|	-	4e-10	39.7	0.1	4.9e-10	39.4	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
HTH_23	PF13384.1	gi|332797642|ref|YP_004459142.1|	-	0.098	12.3	0.0	0.25	11.0	0.0	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
ABC_tran	PF00005.22	gi|332797643|ref|YP_004459143.1|	-	6.8e-34	117.1	0.2	1e-33	116.4	0.1	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797643|ref|YP_004459143.1|	-	1.3e-16	61.4	1.7	1.2e-15	58.2	0.0	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|332797643|ref|YP_004459143.1|	-	2.9e-06	26.5	4.6	0.044	12.8	0.0	2.9	2	1	0	3	3	3	2	AAA	ATPase	domain
AAA_25	PF13481.1	gi|332797643|ref|YP_004459143.1|	-	3e-05	23.4	0.0	0.00013	21.4	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|332797643|ref|YP_004459143.1|	-	6e-05	22.3	0.1	0.0022	17.2	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
UPF0079	PF02367.12	gi|332797643|ref|YP_004459143.1|	-	0.00011	21.8	0.1	0.0008	19.0	0.0	2.1	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_33	PF13671.1	gi|332797643|ref|YP_004459143.1|	-	0.0002	21.2	0.0	0.00082	19.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|332797643|ref|YP_004459143.1|	-	0.00028	21.0	0.6	0.0011	19.0	0.2	2.0	1	1	1	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|332797643|ref|YP_004459143.1|	-	0.00028	20.4	0.2	0.087	12.2	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
AAA_14	PF13173.1	gi|332797643|ref|YP_004459143.1|	-	0.0004	20.3	0.8	0.021	14.7	0.0	3.1	1	1	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|332797643|ref|YP_004459143.1|	-	0.0004	20.7	6.0	0.0016	18.8	4.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|332797643|ref|YP_004459143.1|	-	0.00074	19.7	0.9	0.0028	17.8	0.6	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|332797643|ref|YP_004459143.1|	-	0.001	19.1	0.2	0.0037	17.2	0.1	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|332797643|ref|YP_004459143.1|	-	0.0015	17.9	0.3	1.6	8.0	0.1	2.6	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_29	PF13555.1	gi|332797643|ref|YP_004459143.1|	-	0.0023	17.3	0.0	0.005	16.3	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Arch_ATPase	PF01637.13	gi|332797643|ref|YP_004459143.1|	-	0.0024	17.6	1.2	0.0077	15.9	0.6	2.1	1	1	0	1	1	1	1	Archaeal	ATPase
SbcCD_C	PF13558.1	gi|332797643|ref|YP_004459143.1|	-	0.003	17.4	0.0	0.029	14.2	0.0	2.4	2	1	0	2	2	1	1	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|332797643|ref|YP_004459143.1|	-	0.0053	15.9	0.0	0.0094	15.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
NTPase_1	PF03266.10	gi|332797643|ref|YP_004459143.1|	-	0.0073	16.0	2.0	0.19	11.4	0.1	2.8	3	1	0	3	3	3	1	NTPase
MutS_V	PF00488.16	gi|332797643|ref|YP_004459143.1|	-	0.0074	15.7	0.0	0.17	11.2	0.0	2.1	2	0	0	2	2	2	1	MutS	domain	V
NACHT	PF05729.7	gi|332797643|ref|YP_004459143.1|	-	0.0076	15.9	0.2	0.019	14.6	0.0	1.7	2	0	0	2	2	1	1	NACHT	domain
AAA_18	PF13238.1	gi|332797643|ref|YP_004459143.1|	-	0.016	15.5	1.5	0.037	14.3	0.9	1.9	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|332797643|ref|YP_004459143.1|	-	0.019	13.8	0.0	0.038	12.8	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
ATP_bind_1	PF03029.12	gi|332797643|ref|YP_004459143.1|	-	0.037	13.5	0.3	1.1	8.7	0.0	2.8	4	0	0	4	4	3	0	Conserved	hypothetical	ATP	binding	protein
AAA_19	PF13245.1	gi|332797643|ref|YP_004459143.1|	-	0.047	13.4	0.1	0.13	12.0	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF87	PF01935.12	gi|332797643|ref|YP_004459143.1|	-	0.048	13.4	0.6	0.13	12.1	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
Zeta_toxin	PF06414.7	gi|332797643|ref|YP_004459143.1|	-	0.053	12.6	0.0	0.097	11.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Miro	PF08477.8	gi|332797643|ref|YP_004459143.1|	-	0.06	13.8	0.1	0.14	12.7	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
AAA_28	PF13521.1	gi|332797643|ref|YP_004459143.1|	-	0.06	13.2	0.3	0.19	11.6	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|332797643|ref|YP_004459143.1|	-	0.061	12.2	0.1	0.13	11.1	0.1	1.6	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ATP-synt_ab	PF00006.20	gi|332797643|ref|YP_004459143.1|	-	0.067	12.6	0.0	0.1	12.0	0.0	1.4	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|332797643|ref|YP_004459143.1|	-	0.081	13.7	2.4	0.77	10.5	1.6	2.5	1	1	0	1	1	1	0	AAA	domain
Gtr1_RagA	PF04670.7	gi|332797643|ref|YP_004459143.1|	-	0.082	12.0	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
AAA_30	PF13604.1	gi|332797643|ref|YP_004459143.1|	-	0.085	12.4	0.1	0.21	11.1	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
RNA_helicase	PF00910.17	gi|332797643|ref|YP_004459143.1|	-	0.097	12.8	0.2	0.52	10.5	0.0	2.2	2	0	0	2	2	2	0	RNA	helicase
cobW	PF02492.14	gi|332797643|ref|YP_004459143.1|	-	0.1	12.0	0.1	0.19	11.1	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|332797643|ref|YP_004459143.1|	-	0.12	12.1	0.7	0.76	9.5	0.1	2.3	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Dynamin_N	PF00350.18	gi|332797643|ref|YP_004459143.1|	-	0.12	12.1	0.1	0.66	9.7	0.0	2.1	1	1	0	1	1	1	0	Dynamin	family
Mg_chelatase	PF01078.16	gi|332797643|ref|YP_004459143.1|	-	0.13	11.3	0.0	0.27	10.3	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
MMR_HSR1	PF01926.18	gi|332797643|ref|YP_004459143.1|	-	0.17	11.8	0.6	0.42	10.5	0.3	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
BCA_ABC_TP_C	PF12399.3	gi|332797643|ref|YP_004459143.1|	-	0.21	11.3	0.9	0.82	9.4	0.0	2.2	2	0	0	2	2	2	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
ABC2_membrane	PF01061.19	gi|332797644|ref|YP_004459144.1|	-	6.7e-09	35.2	23.7	6.7e-09	35.2	16.4	1.5	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|332797644|ref|YP_004459144.1|	-	1e-07	31.3	24.0	1e-07	31.3	16.6	1.9	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
Zip	PF02535.17	gi|332797644|ref|YP_004459144.1|	-	1.3	7.9	7.2	2.8	6.8	1.1	2.3	2	0	0	2	2	2	0	ZIP	Zinc	transporter
PGG	PF13962.1	gi|332797644|ref|YP_004459144.1|	-	2.4	7.8	8.9	0.1	12.2	0.9	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function
Phage_connect_1	PF05135.8	gi|332797646|ref|YP_004459146.1|	-	0.062	13.4	0.6	13	6.0	0.1	2.9	2	1	1	3	3	3	0	Phage	gp6-like	head-tail	connector	protein
EFG_IV	PF03764.13	gi|332797646|ref|YP_004459146.1|	-	0.13	11.8	0.0	0.26	10.8	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	G,	domain	IV
MFS_1	PF07690.11	gi|332797647|ref|YP_004459147.1|	-	1.9e-21	76.2	34.8	3.4e-16	58.9	8.0	2.1	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
DUF217	PF02697.9	gi|332797648|ref|YP_004459148.1|	-	0.0043	17.2	3.1	0.028	14.6	0.5	2.2	1	1	1	2	2	2	1	Uncharacterized	ACR,	COG1753
DUF3924	PF13062.1	gi|332797648|ref|YP_004459148.1|	-	0.037	13.8	0.4	0.062	13.1	0.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3924)
Post_transc_reg	PF13797.1	gi|332797648|ref|YP_004459148.1|	-	0.051	13.1	0.1	0.095	12.3	0.0	1.6	1	1	0	1	1	1	0	Post-transcriptional	regulator
DUF2281	PF10047.4	gi|332797648|ref|YP_004459148.1|	-	0.21	11.9	1.2	10	6.4	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2281)
PIN	PF01850.16	gi|332797649|ref|YP_004459149.1|	-	2.6e-12	47.1	0.4	3e-12	46.9	0.3	1.1	1	0	0	1	1	1	1	PIN	domain
PIRT	PF15099.1	gi|332797650|ref|YP_004459150.1|	-	0.41	9.8	3.3	1	8.5	2.3	1.6	1	0	0	1	1	1	0	Phosphoinositide-interacting	protein	family
FixQ	PF05545.6	gi|332797650|ref|YP_004459150.1|	-	2.7	7.6	7.3	0.15	11.6	0.3	2.5	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
2TM	PF13239.1	gi|332797650|ref|YP_004459150.1|	-	5.6	7.1	22.1	2.4	8.2	1.0	3.4	3	0	0	3	3	3	0	2TM	domain
Fer4_10	PF13237.1	gi|332797651|ref|YP_004459151.1|	-	3.7e-07	29.8	6.0	6.5e-07	29.0	4.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797651|ref|YP_004459151.1|	-	2e-06	28.1	7.6	0.0085	16.4	0.0	2.7	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|332797651|ref|YP_004459151.1|	-	2.8e-05	23.8	8.8	0.014	15.2	0.4	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|332797651|ref|YP_004459151.1|	-	3.1e-05	24.1	6.8	3.1e-05	24.1	4.7	2.0	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797651|ref|YP_004459151.1|	-	3.4e-05	23.5	8.9	0.017	15.0	0.3	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|332797651|ref|YP_004459151.1|	-	0.0001	21.7	0.6	0.0001	21.7	0.4	2.9	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|332797651|ref|YP_004459151.1|	-	0.00038	20.2	2.5	0.0008	19.2	1.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332797651|ref|YP_004459151.1|	-	0.039	14.7	3.2	3	8.6	0.0	2.5	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|332797651|ref|YP_004459151.1|	-	0.064	13.2	11.1	0.043	13.8	5.0	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|332797651|ref|YP_004459151.1|	-	0.46	10.1	6.4	0.11	12.1	1.2	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_17	PF13534.1	gi|332797651|ref|YP_004459151.1|	-	2.8	8.3	12.4	19	5.7	6.1	2.7	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|332797651|ref|YP_004459151.1|	-	5.1	7.9	12.7	0.51	11.0	0.6	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|332797651|ref|YP_004459151.1|	-	5.9	7.5	13.4	3.4	8.2	1.4	2.8	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|332797651|ref|YP_004459151.1|	-	6.6	6.6	14.8	0.088	12.6	4.8	2.0	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
UPF0233	PF06781.7	gi|332797651|ref|YP_004459151.1|	-	8.3	6.1	17.2	3.3	7.3	0.5	4.6	4	0	0	4	4	4	0	Uncharacterised	protein	family	(UPF0233)
MFS_1	PF07690.11	gi|332797652|ref|YP_004459152.1|	-	8.3e-26	90.5	57.5	4.4e-16	58.5	25.4	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332797652|ref|YP_004459152.1|	-	3.8e-06	25.3	13.0	0.00045	18.4	2.4	2.1	2	0	0	2	2	2	2	Transmembrane	secretion	effector
ABC2_membrane_2	PF12679.2	gi|332797653|ref|YP_004459153.1|	-	1.1e-14	53.9	12.8	3.4e-13	49.0	8.8	2.0	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|332797653|ref|YP_004459153.1|	-	1.4e-05	24.4	56.7	0.0017	17.5	39.3	2.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
CarboxypepD_reg	PF13620.1	gi|332797653|ref|YP_004459153.1|	-	9.6e-05	22.3	1.8	0.00014	21.8	0.4	1.9	3	0	0	3	3	3	1	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|332797653|ref|YP_004459153.1|	-	0.0024	17.8	2.4	0.0056	16.7	0.5	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
ABC2_membrane_3	PF12698.2	gi|332797653|ref|YP_004459153.1|	-	0.038	13.0	50.1	0.07	12.1	34.7	1.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|332797654|ref|YP_004459154.1|	-	1.7e-23	83.4	0.0	2.9e-23	82.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797654|ref|YP_004459154.1|	-	4.9e-12	46.4	0.6	1.1e-10	42.0	0.4	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|332797654|ref|YP_004459154.1|	-	0.0034	17.7	2.7	0.005	17.1	1.8	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|332797654|ref|YP_004459154.1|	-	0.0043	16.5	0.1	0.2	11.0	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|332797654|ref|YP_004459154.1|	-	0.0098	15.4	0.2	0.02	14.3	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|332797654|ref|YP_004459154.1|	-	0.02	14.7	0.0	0.078	12.8	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|332797654|ref|YP_004459154.1|	-	0.068	12.6	1.6	0.14	11.5	0.5	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_30	PF13604.1	gi|332797654|ref|YP_004459154.1|	-	0.082	12.4	0.1	0.38	10.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
B12-binding	PF02310.14	gi|332797655|ref|YP_004459155.1|	-	0.0022	17.8	0.0	0.0047	16.7	0.0	1.5	2	0	0	2	2	2	1	B12	binding	domain
YbjQ_1	PF01906.12	gi|332797657|ref|YP_004459157.1|	-	7.9e-20	71.2	0.4	1.8e-19	70.1	0.3	1.5	1	1	0	1	1	1	1	Putative	heavy-metal-binding
SeleniumBinding	PF11524.3	gi|332797657|ref|YP_004459157.1|	-	0.00011	22.3	1.9	0.14	12.3	1.3	2.2	1	1	0	1	1	1	1	Selenium	binding	protein
IF-2B	PF01008.12	gi|332797658|ref|YP_004459158.1|	-	9.7e-76	254.4	0.1	1.2e-75	254.1	0.1	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF4398	PF14346.1	gi|332797658|ref|YP_004459158.1|	-	0.13	12.3	0.8	0.21	11.6	0.6	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
Osmo_CC	PF08946.5	gi|332797659|ref|YP_004459159.1|	-	0.004	17.1	2.4	0.0049	16.8	0.1	2.2	2	0	0	2	2	2	1	Osmosensory	transporter	coiled	coil
NTP_transf_2	PF01909.18	gi|332797662|ref|YP_004459162.1|	-	2.7e-16	59.6	0.5	3.7e-16	59.2	0.4	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|332797662|ref|YP_004459162.1|	-	0.021	14.8	0.0	0.035	14.1	0.0	1.4	1	1	0	1	1	1	0	DNA	polymerase	beta	palm
Baculo_p24	PF05073.7	gi|332797662|ref|YP_004459162.1|	-	0.11	11.9	0.7	0.99	8.9	0.0	2.0	1	1	0	2	2	2	0	Baculovirus	P24	capsid	protein
HEPN	PF05168.9	gi|332797663|ref|YP_004459163.1|	-	3e-19	69.0	0.1	3.7e-19	68.7	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
DNA_primase_S	PF01896.14	gi|332797664|ref|YP_004459164.1|	-	0.11	12.3	0.0	0.25	11.1	0.0	1.6	1	0	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase	small	subunit
PaREP1	PF05942.6	gi|332797665|ref|YP_004459165.1|	-	2.3e-23	82.2	4.1	3.5e-23	81.6	2.8	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332797665|ref|YP_004459165.1|	-	0.00039	20.2	4.8	0.00086	19.1	3.3	1.6	1	1	0	1	1	1	1	HEPN	domain
DUF3818	PF12825.2	gi|332797665|ref|YP_004459165.1|	-	0.12	11.0	3.1	0.14	10.8	2.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	in	PX-proteins	(DUF3818)
GED	PF02212.13	gi|332797665|ref|YP_004459165.1|	-	0.15	11.9	4.1	0.13	12.1	0.3	2.5	3	0	0	3	3	3	0	Dynamin	GTPase	effector	domain
PIN	PF01850.16	gi|332797666|ref|YP_004459166.1|	-	1.1e-06	28.9	1.5	1.3e-06	28.7	1.0	1.1	1	0	0	1	1	1	1	PIN	domain
Syntaxin_2	PF14523.1	gi|332797666|ref|YP_004459166.1|	-	0.05	13.6	0.5	0.099	12.6	0.1	1.5	2	0	0	2	2	2	0	Syntaxin-like	protein
MAAL_N	PF05034.8	gi|332797666|ref|YP_004459166.1|	-	0.076	12.7	0.1	0.086	12.5	0.1	1.2	1	0	0	1	1	1	0	Methylaspartate	ammonia-lyase	N-terminus
Cadherin_2	PF08266.7	gi|332797666|ref|YP_004459166.1|	-	0.083	12.4	0.1	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Cadherin-like
DUF603	PF04645.7	gi|332797666|ref|YP_004459166.1|	-	0.39	10.6	3.9	0.19	11.6	1.2	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF603
DUF4398	PF14346.1	gi|332797666|ref|YP_004459166.1|	-	0.63	10.1	5.0	1.3	9.1	3.5	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
HPD	PF05044.7	gi|332797667|ref|YP_004459167.1|	-	0.062	12.9	0.7	0.15	11.7	0.5	1.7	1	1	0	1	1	1	0	Homeo-prospero	domain
HEPN	PF05168.9	gi|332797668|ref|YP_004459168.1|	-	3.8e-17	62.2	0.0	4.1e-17	62.1	0.0	1.0	1	0	0	1	1	1	1	HEPN	domain
Peripla_BP_2	PF01497.13	gi|332797669|ref|YP_004459169.1|	-	5.4e-18	64.9	0.0	7.3e-18	64.5	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
FecCD	PF01032.13	gi|332797670|ref|YP_004459170.1|	-	1.1e-62	211.6	32.8	1.4e-62	211.3	22.7	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|332797670|ref|YP_004459170.1|	-	2.5e-05	23.6	23.4	4.4e-05	22.9	16.2	1.4	1	1	0	1	1	1	1	ABC	3	transport	family
GNVR	PF13807.1	gi|332797670|ref|YP_004459170.1|	-	0.32	10.7	0.1	0.32	10.7	0.0	3.0	3	0	0	3	3	3	0	G-rich	domain	on	putative	tyrosine	kinase
ABC_tran	PF00005.22	gi|332797671|ref|YP_004459171.1|	-	7.3e-21	74.9	0.0	1.9e-20	73.5	0.0	1.7	2	0	0	2	2	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797671|ref|YP_004459171.1|	-	6.8e-16	59.0	2.5	4.3e-07	30.1	0.1	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|332797671|ref|YP_004459171.1|	-	2.5e-10	39.9	4.7	9e-06	25.0	0.4	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|332797671|ref|YP_004459171.1|	-	4.4e-07	29.2	2.5	0.002	17.2	0.2	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|332797671|ref|YP_004459171.1|	-	1.3e-06	28.8	3.5	2.6e-06	27.9	2.4	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|332797671|ref|YP_004459171.1|	-	2.4e-05	23.0	2.5	0.0016	17.0	0.2	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|332797671|ref|YP_004459171.1|	-	5.1e-05	22.7	0.0	0.00014	21.3	0.0	1.7	2	0	0	2	2	1	1	P-loop	containing	region	of	AAA	domain
Arch_ATPase	PF01637.13	gi|332797671|ref|YP_004459171.1|	-	0.00032	20.4	1.8	0.00061	19.5	1.2	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|332797671|ref|YP_004459171.1|	-	0.00089	19.4	0.1	0.0023	18.1	0.1	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Miro	PF08477.8	gi|332797671|ref|YP_004459171.1|	-	0.0016	18.9	0.0	0.0033	17.9	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
NACHT	PF05729.7	gi|332797671|ref|YP_004459171.1|	-	0.0032	17.1	0.1	0.0058	16.3	0.1	1.5	1	1	0	1	1	1	1	NACHT	domain
T2SE	PF00437.15	gi|332797671|ref|YP_004459171.1|	-	0.0036	16.2	0.5	0.0078	15.1	0.3	1.6	1	1	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|332797671|ref|YP_004459171.1|	-	0.0054	15.9	0.2	0.011	14.9	0.1	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
Adeno_IVa2	PF02456.10	gi|332797671|ref|YP_004459171.1|	-	0.0058	15.3	0.3	0.016	13.8	0.0	1.7	2	0	0	2	2	2	1	Adenovirus	IVa2	protein
cobW	PF02492.14	gi|332797671|ref|YP_004459171.1|	-	0.0061	16.0	0.9	0.011	15.2	0.1	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|332797671|ref|YP_004459171.1|	-	0.0072	16.0	1.4	0.023	14.4	0.0	2.2	2	1	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|332797671|ref|YP_004459171.1|	-	0.0083	16.1	0.0	0.013	15.4	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797671|ref|YP_004459171.1|	-	0.0083	16.2	0.2	0.012	15.7	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|332797671|ref|YP_004459171.1|	-	0.0086	15.9	0.4	0.016	15.0	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|332797671|ref|YP_004459171.1|	-	0.016	14.9	0.0	0.029	14.1	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|332797671|ref|YP_004459171.1|	-	0.017	14.5	0.1	0.035	13.5	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|332797671|ref|YP_004459171.1|	-	0.018	14.4	0.3	0.036	13.4	0.1	1.5	2	0	0	2	2	2	0	AAA-like	domain
Bac_DnaA	PF00308.13	gi|332797671|ref|YP_004459171.1|	-	0.02	14.5	0.0	0.043	13.4	0.0	1.5	1	1	0	1	1	1	0	Bacterial	dnaA	protein
AAA_18	PF13238.1	gi|332797671|ref|YP_004459171.1|	-	0.021	15.1	0.5	0.039	14.2	0.4	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|332797671|ref|YP_004459171.1|	-	0.031	13.8	0.1	0.063	12.8	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|332797671|ref|YP_004459171.1|	-	0.037	13.9	0.0	0.14	11.9	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|332797671|ref|YP_004459171.1|	-	0.05	13.0	0.3	0.095	12.1	0.2	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_5	PF07728.9	gi|332797671|ref|YP_004459171.1|	-	0.051	13.3	0.2	0.091	12.4	0.1	1.8	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
SbcCD_C	PF13558.1	gi|332797671|ref|YP_004459171.1|	-	0.052	13.4	0.0	0.84	9.5	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NTPase_1	PF03266.10	gi|332797671|ref|YP_004459171.1|	-	0.055	13.1	3.1	0.54	9.9	0.1	2.2	2	0	0	2	2	2	0	NTPase
7TM_GPCR_Sra	PF02117.11	gi|332797671|ref|YP_004459171.1|	-	0.069	11.7	0.1	0.098	11.2	0.0	1.1	1	0	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Sra
DUF483	PF04467.7	gi|332797671|ref|YP_004459171.1|	-	0.07	13.2	0.3	1.2	9.2	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF483)
IstB_IS21	PF01695.12	gi|332797671|ref|YP_004459171.1|	-	0.074	12.4	0.7	3.5	7.0	0.1	2.2	1	1	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF3584	PF12128.3	gi|332797671|ref|YP_004459171.1|	-	0.098	9.9	0.3	0.14	9.4	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Mg_chelatase	PF01078.16	gi|332797671|ref|YP_004459171.1|	-	0.11	11.6	0.0	0.16	11.1	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|332797671|ref|YP_004459171.1|	-	0.11	12.1	1.1	0.13	11.8	0.2	1.5	2	0	0	2	2	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|332797671|ref|YP_004459171.1|	-	0.12	11.4	0.2	0.86	8.6	0.1	2.0	2	0	0	2	2	2	0	Zeta	toxin
MutS_V	PF00488.16	gi|332797671|ref|YP_004459171.1|	-	0.13	11.6	0.4	0.68	9.3	0.0	2.1	2	1	0	2	2	2	0	MutS	domain	V
UPF0079	PF02367.12	gi|332797671|ref|YP_004459171.1|	-	0.13	11.9	0.2	0.41	10.2	0.0	1.8	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_11	PF13086.1	gi|332797671|ref|YP_004459171.1|	-	0.13	11.7	0.1	0.2	11.2	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|332797671|ref|YP_004459171.1|	-	0.14	10.6	0.9	0.36	9.3	0.4	1.7	1	1	1	2	2	2	0	Predicted	ATPase	of	the	ABC	class
TP_methylase	PF00590.15	gi|332797672|ref|YP_004459172.1|	-	1.6e-44	152.1	0.2	2.6e-44	151.4	0.2	1.3	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Ribosomal_L18e	PF00828.14	gi|332797672|ref|YP_004459172.1|	-	0.022	15.1	6.9	0.71	10.2	0.2	2.8	4	0	0	4	4	4	0	Ribosomal	protein	L18e/L15
TPP_enzyme_M	PF00205.17	gi|332797672|ref|YP_004459172.1|	-	0.11	12.2	0.0	0.35	10.6	0.0	1.8	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
Arc_PepC	PF06819.6	gi|332797672|ref|YP_004459172.1|	-	0.26	11.2	9.9	0.32	10.9	0.2	3.2	3	0	0	3	3	3	0	Archaeal	Peptidase	A24	C-terminal	Domain
TP_methylase	PF00590.15	gi|332797673|ref|YP_004459173.1|	-	1.5e-40	139.1	0.0	1.7e-40	138.9	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CRS1_YhbY	PF01985.16	gi|332797673|ref|YP_004459173.1|	-	0.055	13.4	0.2	0.13	12.2	0.1	1.6	1	0	0	1	1	1	0	CRS1	/	YhbY	(CRM)	domain
Methyltransf_18	PF12847.2	gi|332797674|ref|YP_004459174.1|	-	1.7e-14	54.3	0.0	2.4e-14	53.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332797674|ref|YP_004459174.1|	-	1.5e-12	47.3	0.0	2e-12	46.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|332797674|ref|YP_004459174.1|	-	4.3e-10	39.4	0.1	7.5e-10	38.6	0.1	1.5	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|332797674|ref|YP_004459174.1|	-	4.2e-08	32.7	0.0	6.7e-08	32.0	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|332797674|ref|YP_004459174.1|	-	1.1e-07	31.9	0.0	1.7e-07	31.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|332797674|ref|YP_004459174.1|	-	1.1e-07	31.4	0.0	1.7e-07	30.8	0.0	1.4	1	1	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_24	PF13578.1	gi|332797674|ref|YP_004459174.1|	-	2.4e-06	28.3	0.0	3.2e-06	27.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|332797674|ref|YP_004459174.1|	-	3.9e-06	26.0	0.2	5.1e-06	25.6	0.1	1.2	1	0	0	1	1	1	1	O-methyltransferase
Ubie_methyltran	PF01209.13	gi|332797674|ref|YP_004459174.1|	-	5.1e-06	25.7	0.2	6.1e-06	25.5	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|332797674|ref|YP_004459174.1|	-	1.6e-05	24.1	0.6	2.1e-05	23.8	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
GidB	PF02527.10	gi|332797674|ref|YP_004459174.1|	-	1.8e-05	23.9	0.2	2.3e-05	23.6	0.2	1.2	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
DOT1	PF08123.8	gi|332797674|ref|YP_004459174.1|	-	2e-05	24.0	0.0	2.7e-05	23.5	0.0	1.4	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_25	PF13649.1	gi|332797674|ref|YP_004459174.1|	-	2.4e-05	24.6	0.0	3.5e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|332797674|ref|YP_004459174.1|	-	6.1e-05	22.1	0.0	0.00012	21.2	0.0	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
RrnaAD	PF00398.15	gi|332797674|ref|YP_004459174.1|	-	9.1e-05	21.6	0.0	0.00013	21.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
UPF0020	PF01170.13	gi|332797674|ref|YP_004459174.1|	-	0.0001	21.9	0.0	0.00017	21.1	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Met_10	PF02475.11	gi|332797674|ref|YP_004459174.1|	-	0.00011	21.8	0.1	0.00015	21.4	0.0	1.4	1	1	0	1	1	1	1	Met-10+	like-protein
GCD14	PF08704.5	gi|332797674|ref|YP_004459174.1|	-	0.00016	21.2	0.0	0.0002	20.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
CMAS	PF02353.15	gi|332797674|ref|YP_004459174.1|	-	0.00022	20.3	0.0	0.00027	20.0	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.5	gi|332797674|ref|YP_004459174.1|	-	0.00026	20.5	0.0	0.00042	19.8	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_11	PF08241.7	gi|332797674|ref|YP_004459174.1|	-	0.0012	19.2	0.0	0.0021	18.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|332797674|ref|YP_004459174.1|	-	0.002	17.4	0.2	0.024	13.9	0.0	2.0	1	1	1	2	2	2	1	MraW	methylase	family
Fibrillarin	PF01269.12	gi|332797674|ref|YP_004459174.1|	-	0.0021	17.0	0.1	0.0027	16.6	0.1	1.2	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_12	PF08242.7	gi|332797674|ref|YP_004459174.1|	-	0.0026	18.1	0.0	0.004	17.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|332797674|ref|YP_004459174.1|	-	0.0096	15.9	0.0	0.019	14.9	0.0	1.4	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_23	PF13489.1	gi|332797674|ref|YP_004459174.1|	-	0.022	14.4	0.0	0.029	14.1	0.0	1.3	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|332797674|ref|YP_004459174.1|	-	0.024	14.0	0.0	0.036	13.5	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
PRMT5	PF05185.11	gi|332797674|ref|YP_004459174.1|	-	0.029	13.2	0.0	0.038	12.8	0.0	1.2	1	0	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
DNA_methylase	PF00145.12	gi|332797674|ref|YP_004459174.1|	-	0.061	12.4	0.0	0.085	11.9	0.0	1.2	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
CbiD	PF01888.12	gi|332797675|ref|YP_004459175.1|	-	5e-68	228.8	6.8	7e-68	228.4	4.7	1.2	1	0	0	1	1	1	1	CbiD
RnfC_N	PF13375.1	gi|332797675|ref|YP_004459175.1|	-	0.0027	17.4	0.2	0.0085	15.7	0.2	1.8	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
TP_methylase	PF00590.15	gi|332797676|ref|YP_004459176.1|	-	3.6e-37	128.0	0.3	4.2e-37	127.8	0.2	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Ldh_1_N	PF00056.18	gi|332797676|ref|YP_004459176.1|	-	0.014	15.2	0.7	1.4	8.7	0.2	2.3	2	0	0	2	2	2	0	lactate/malate	dehydrogenase,	NAD	binding	domain
UPF0086	PF01868.11	gi|332797676|ref|YP_004459176.1|	-	0.065	12.8	0.0	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	UPF0086
CbiC	PF02570.10	gi|332797677|ref|YP_004459177.1|	-	1.1e-48	165.3	0.7	1.6e-48	164.7	0.5	1.3	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
CbiX	PF01903.12	gi|332797677|ref|YP_004459177.1|	-	2.1e-20	72.7	0.0	3.3e-19	68.9	0.0	2.7	3	0	0	3	3	3	1	CbiX
CbiK	PF06180.6	gi|332797677|ref|YP_004459177.1|	-	0.023	13.8	0.0	0.035	13.1	0.0	1.2	1	0	0	1	1	1	0	Cobalt	chelatase	(CbiK)
TP_methylase	PF00590.15	gi|332797679|ref|YP_004459179.1|	-	4e-34	118.1	0.0	4.5e-34	117.9	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiG_N	PF11760.3	gi|332797680|ref|YP_004459180.1|	-	7.3e-30	102.5	0.0	1.9e-29	101.2	0.0	1.7	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|332797680|ref|YP_004459180.1|	-	1.3e-19	70.5	0.5	3.2e-19	69.3	0.4	1.7	1	0	0	1	1	1	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.3	gi|332797680|ref|YP_004459180.1|	-	0.0013	18.9	0.0	0.0031	17.6	0.0	1.7	1	0	0	1	1	1	1	Cobalamin	biosynthesis	central	region
zinc_ribbon_2	PF13240.1	gi|332797681|ref|YP_004459181.1|	-	7.2e-08	31.6	5.4	1.3e-07	30.9	3.8	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|332797681|ref|YP_004459181.1|	-	1.3e-07	30.5	4.7	2.2e-07	29.8	3.3	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|332797681|ref|YP_004459181.1|	-	4.5e-05	23.1	1.8	8e-05	22.3	1.3	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|332797681|ref|YP_004459181.1|	-	0.012	14.7	0.9	0.012	14.7	0.6	1.7	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
UPF0547	PF10571.4	gi|332797681|ref|YP_004459181.1|	-	0.06	13.0	6.6	0.35	10.6	4.6	2.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-tcix	PF14952.1	gi|332797681|ref|YP_004459181.1|	-	0.091	12.1	0.6	0.16	11.3	0.4	1.4	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
OppC_N	PF12911.2	gi|332797681|ref|YP_004459181.1|	-	0.22	10.9	2.7	0.81	9.1	1.9	2.0	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
RNA_POL_M_15KD	PF02150.11	gi|332797681|ref|YP_004459181.1|	-	0.33	10.6	3.6	0.7	9.6	2.5	1.5	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DUF2116	PF09889.4	gi|332797681|ref|YP_004459181.1|	-	0.75	9.6	3.5	14	5.5	0.3	2.4	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Rifin_STEVOR	PF02009.11	gi|332797681|ref|YP_004459181.1|	-	1.6	8.2	5.7	3.9	7.0	1.3	2.2	2	0	0	2	2	2	0	Rifin/stevor	family
zf-NADH-PPase	PF09297.6	gi|332797681|ref|YP_004459181.1|	-	5.1	6.7	6.1	2.2	7.8	0.2	2.2	1	1	1	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Molybdopterin	PF00384.17	gi|332797682|ref|YP_004459182.1|	-	4.3e-73	246.4	0.0	5.3e-73	246.2	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|332797682|ref|YP_004459182.1|	-	1.8e-22	79.2	0.1	4.7e-22	77.8	0.0	1.7	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|332797682|ref|YP_004459182.1|	-	2.2e-17	62.6	0.2	3.8e-17	61.8	0.2	1.4	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
TOBE	PF03459.12	gi|332797682|ref|YP_004459182.1|	-	0.092	12.8	0.0	1.3	9.2	0.0	2.5	2	0	0	2	2	2	0	TOBE	domain
NTP_transf_2	PF01909.18	gi|332797683|ref|YP_004459183.1|	-	7.8e-14	51.7	0.8	1.3e-13	51.1	0.5	1.4	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|332797683|ref|YP_004459183.1|	-	0.00027	20.9	0.0	0.00033	20.6	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
Anticodon_1	PF08264.8	gi|332797683|ref|YP_004459183.1|	-	0.0032	17.2	4.1	0.0082	15.9	1.0	2.0	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
TCTP	PF00838.12	gi|332797683|ref|YP_004459183.1|	-	0.32	10.9	2.6	1.2	9.0	0.1	2.0	2	0	0	2	2	2	0	Translationally	controlled	tumour	protein
CLAMP	PF14769.1	gi|332797683|ref|YP_004459183.1|	-	0.33	11.1	2.5	1.7	8.7	0.5	2.1	2	0	0	2	2	2	0	Flagellar	C1a	complex	subunit	C1a-32
HEPN	PF05168.9	gi|332797684|ref|YP_004459184.1|	-	1.2e-25	89.6	0.0	1.4e-25	89.4	0.0	1.0	1	0	0	1	1	1	1	HEPN	domain
CxxCxxCC	PF03692.10	gi|332797685|ref|YP_004459185.1|	-	1.9e-07	31.4	2.4	3.3e-07	30.6	1.7	1.4	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
DUF2661	PF10860.3	gi|332797686|ref|YP_004459186.1|	-	0.052	13.7	0.4	0.1	12.7	0.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2661)
FlbD	PF06289.6	gi|332797688|ref|YP_004459188.1|	-	0.99	8.8	4.8	2.5	7.5	0.6	2.9	3	0	0	3	3	3	0	Flagellar	protein	(FlbD)
zf-ribbon_3	PF13248.1	gi|332797689|ref|YP_004459189.1|	-	3.3e-07	29.2	4.4	5e-07	28.7	3.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|332797689|ref|YP_004459189.1|	-	2.9e-05	23.8	1.2	4e-05	23.3	0.8	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|332797689|ref|YP_004459189.1|	-	0.00028	20.2	3.6	0.00042	19.7	2.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|332797689|ref|YP_004459189.1|	-	0.00047	19.2	2.3	0.0007	18.6	1.6	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
Linocin_M18	PF04454.7	gi|332797689|ref|YP_004459189.1|	-	0.13	11.0	0.0	0.23	10.2	0.0	1.3	1	0	0	1	1	1	0	Encapsulating	protein	for	peroxidase
ADK_lid	PF05191.9	gi|332797689|ref|YP_004459189.1|	-	0.51	10.0	5.1	1.7	8.3	0.2	2.9	2	1	1	3	3	3	0	Adenylate	kinase,	active	site	lid
GATA	PF00320.22	gi|332797689|ref|YP_004459189.1|	-	1	8.7	3.5	0.43	9.9	0.2	1.9	1	1	0	2	2	2	0	GATA	zinc	finger
MFS_1	PF07690.11	gi|332797690|ref|YP_004459190.1|	-	4.8e-21	74.8	27.1	4.1e-14	52.0	13.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|332797690|ref|YP_004459190.1|	-	5.5e-06	25.2	11.8	5.5e-06	25.2	8.2	1.7	1	1	1	2	2	2	1	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|332797690|ref|YP_004459190.1|	-	0.027	12.6	1.0	0.045	11.8	0.7	1.4	1	0	0	1	1	1	0	Transmembrane	secretion	effector
DUF2499	PF10693.4	gi|332797690|ref|YP_004459190.1|	-	0.057	13.4	0.0	0.18	11.8	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2499)
DapH_N	PF08503.5	gi|332797691|ref|YP_004459191.1|	-	0.3	11.2	1.8	0.36	10.9	0.5	1.7	2	0	0	2	2	2	0	Tetrahydrodipicolinate	succinyltransferase	N-terminal
ABC_tran	PF00005.22	gi|332797692|ref|YP_004459192.1|	-	2.6e-27	95.7	0.1	1.6e-26	93.2	0.0	1.9	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|332797692|ref|YP_004459192.1|	-	3.9e-16	59.8	4.6	2e-13	50.9	0.6	2.8	1	1	1	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|332797692|ref|YP_004459192.1|	-	8.1e-08	31.7	6.4	1.8e-05	23.9	0.1	3.0	1	1	2	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|332797692|ref|YP_004459192.1|	-	0.0072	15.8	0.5	0.014	14.8	0.4	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|332797692|ref|YP_004459192.1|	-	0.0097	16.0	0.1	0.031	14.4	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|332797692|ref|YP_004459192.1|	-	0.035	14.4	10.6	0.13	12.5	7.3	2.1	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|332797692|ref|YP_004459192.1|	-	0.037	13.4	0.1	0.16	11.3	0.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|332797692|ref|YP_004459192.1|	-	0.045	12.5	0.6	0.076	11.7	0.1	1.6	2	0	0	2	2	2	0	ArgK	protein
AAA_25	PF13481.1	gi|332797692|ref|YP_004459192.1|	-	0.062	12.6	0.0	0.26	10.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|332797692|ref|YP_004459192.1|	-	0.075	11.9	0.5	0.17	10.7	0.0	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|332797692|ref|YP_004459192.1|	-	0.089	12.9	0.6	0.34	11.1	0.0	2.2	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|332797692|ref|YP_004459192.1|	-	0.1	12.1	0.1	0.24	10.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|332797692|ref|YP_004459192.1|	-	0.11	11.7	0.3	0.24	10.5	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|332797692|ref|YP_004459192.1|	-	0.14	11.4	3.6	2.2	7.4	0.8	2.5	1	1	2	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
MobB	PF03205.9	gi|332797692|ref|YP_004459192.1|	-	0.17	11.6	2.7	0.22	11.2	0.4	2.1	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|332797692|ref|YP_004459192.1|	-	0.22	11.3	1.0	0.47	10.2	0.7	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
ParA	PF10609.4	gi|332797694|ref|YP_004459194.1|	-	0.99	9.3	6.0	0.32	10.9	0.3	2.1	2	0	0	2	2	2	0	ParA/MinD	ATPase	like
HSP20	PF00011.16	gi|332797695|ref|YP_004459195.1|	-	1.9e-12	46.9	0.1	2.3e-12	46.6	0.0	1.2	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
DUF4403	PF14356.1	gi|332797695|ref|YP_004459195.1|	-	0.075	11.3	0.1	0.48	8.6	0.0	2.1	1	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4403)
ABC1	PF03109.11	gi|332797696|ref|YP_004459196.1|	-	6.6e-23	80.9	0.1	2.7e-22	78.9	0.1	2.1	1	1	1	2	2	2	1	ABC1	family
RIO1	PF01163.17	gi|332797696|ref|YP_004459196.1|	-	3.3e-07	29.8	0.8	8.5e-07	28.5	0.1	2.0	2	1	0	2	2	2	1	RIO1	family
APH	PF01636.18	gi|332797696|ref|YP_004459196.1|	-	0.00018	21.3	0.0	0.011	15.4	0.0	2.9	3	0	0	3	3	3	1	Phosphotransferase	enzyme	family
Pkinase	PF00069.20	gi|332797696|ref|YP_004459196.1|	-	0.14	11.2	0.2	0.68	9.0	0.0	2.1	3	0	0	3	3	3	0	Protein	kinase	domain
MerR_1	PF13411.1	gi|332797697|ref|YP_004459197.1|	-	0.0023	17.6	0.1	0.0037	17.0	0.1	1.3	1	0	0	1	1	1	1	MerR	HTH	family	regulatory	protein
HTH_10	PF04967.7	gi|332797697|ref|YP_004459197.1|	-	0.0047	16.4	0.1	0.014	14.9	0.0	1.9	2	0	0	2	2	2	1	HTH	DNA	binding	domain
HTH_17	PF12728.2	gi|332797697|ref|YP_004459197.1|	-	0.012	15.8	0.0	0.023	14.9	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
Nup96	PF12110.3	gi|332797697|ref|YP_004459197.1|	-	0.021	13.9	0.3	0.025	13.6	0.2	1.1	1	0	0	1	1	1	0	Nuclear	protein	96
SpoIIID	PF12116.3	gi|332797697|ref|YP_004459197.1|	-	0.025	14.4	0.5	0.034	14.0	0.3	1.2	1	0	0	1	1	1	0	Stage	III	sporulation	protein	D
TrmB	PF01978.14	gi|332797697|ref|YP_004459197.1|	-	0.027	14.1	0.2	3.9	7.2	0.0	2.1	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
MRP-L20	PF12824.2	gi|332797697|ref|YP_004459197.1|	-	0.033	14.1	0.2	0.042	13.8	0.2	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	subunit	L20
IL2	PF00715.12	gi|332797697|ref|YP_004459197.1|	-	0.051	13.2	0.6	0.06	13.0	0.4	1.2	1	0	0	1	1	1	0	Interleukin	2
HTH_28	PF13518.1	gi|332797697|ref|YP_004459197.1|	-	0.052	13.5	0.0	0.33	11.0	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
Mor	PF08765.6	gi|332797697|ref|YP_004459197.1|	-	0.076	12.7	0.2	0.2	11.4	0.1	1.8	1	1	1	2	2	2	0	Mor	transcription	activator	family
HTH_11	PF08279.7	gi|332797697|ref|YP_004459197.1|	-	0.1	12.2	0.0	0.84	9.3	0.0	2.1	1	1	1	2	2	2	0	HTH	domain
HTH_40	PF14493.1	gi|332797697|ref|YP_004459197.1|	-	0.11	12.7	1.3	0.17	12.1	0.9	1.4	1	1	0	1	1	1	0	Helix-turn-helix	domain
MerR_2	PF13591.1	gi|332797697|ref|YP_004459197.1|	-	0.12	12.0	0.6	0.28	10.8	0.4	1.7	1	1	0	1	1	1	0	MerR	HTH	family	regulatory	protein
HTH_psq	PF05225.11	gi|332797697|ref|YP_004459197.1|	-	0.12	11.9	0.0	0.32	10.5	0.0	1.7	2	0	0	2	2	2	0	helix-turn-helix,	Psq	domain
DUF633	PF04816.7	gi|332797697|ref|YP_004459197.1|	-	0.14	11.5	2.8	0.15	11.3	2.0	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF633)
NUMOD1	PF07453.8	gi|332797697|ref|YP_004459197.1|	-	0.19	11.6	1.7	0.26	11.1	0.1	2.0	2	0	0	2	2	2	0	NUMOD1	domain
MFS_1	PF07690.11	gi|332797698|ref|YP_004459198.1|	-	8.6e-31	106.9	70.2	7.5e-28	97.2	26.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Thermopsin	PF05317.6	gi|332797699|ref|YP_004459199.1|	-	4.2e-50	170.1	8.6	4.2e-50	170.1	6.0	2.4	3	0	0	3	3	3	1	Thermopsin
LRR_3	PF07725.7	gi|332797699|ref|YP_004459199.1|	-	0.011	15.4	0.2	1e+02	2.9	0.0	4.4	4	0	0	4	4	4	0	Leucine	Rich	Repeat
DUF3413	PF11893.3	gi|332797700|ref|YP_004459200.1|	-	3	6.6	6.1	3.5	6.4	4.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3413)
Tetraspannin	PF00335.15	gi|332797700|ref|YP_004459200.1|	-	3.5	6.8	8.6	4.1	6.6	6.0	1.1	1	0	0	1	1	1	0	Tetraspanin	family
TMEM238	PF15125.1	gi|332797700|ref|YP_004459200.1|	-	6.6	6.7	6.6	1.2	9.0	1.4	1.8	2	0	0	2	2	2	0	TMEM238	protein	family
Peripla_BP_2	PF01497.13	gi|332797701|ref|YP_004459201.1|	-	3.4e-28	98.3	0.0	6.2e-28	97.5	0.0	1.4	1	1	0	1	1	1	1	Periplasmic	binding	protein
Virulence_fact	PF13769.1	gi|332797701|ref|YP_004459201.1|	-	0.045	13.6	0.0	0.15	11.9	0.0	1.8	2	0	0	2	2	2	0	Virulence	factor
DUF2097	PF09870.4	gi|332797702|ref|YP_004459202.1|	-	0.063	13.3	0.1	0.076	13.1	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
Plasmid_stabil	PF05016.9	gi|332797703|ref|YP_004459203.1|	-	4.7e-06	26.9	0.0	5.5e-06	26.6	0.0	1.0	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
PaREP1	PF05942.6	gi|332797704|ref|YP_004459204.1|	-	8.6e-24	83.6	0.5	1.7e-23	82.7	0.0	1.6	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF2683	PF10884.3	gi|332797704|ref|YP_004459204.1|	-	0.019	14.9	0.1	0.046	13.6	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2683)
HpaB_N	PF11794.3	gi|332797705|ref|YP_004459205.1|	-	1.4e-88	296.7	0.1	1.9e-88	296.3	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|332797705|ref|YP_004459205.1|	-	1.8e-62	209.8	0.1	2.6e-62	209.3	0.1	1.3	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Asp_Glu_race	PF01177.17	gi|332797708|ref|YP_004459208.1|	-	9.1e-16	58.4	0.0	1.1e-15	58.1	0.0	1.0	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
UBA_3	PF09288.5	gi|332797708|ref|YP_004459208.1|	-	0.017	14.7	1.2	0.082	12.5	0.1	2.5	2	1	1	3	3	3	0	Fungal	ubiquitin-associated	domain
DUF3188	PF11384.3	gi|332797709|ref|YP_004459209.1|	-	0.046	13.2	0.0	6	6.5	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3188)
COX1	PF00115.15	gi|332797710|ref|YP_004459210.1|	-	2.8e-57	194.3	57.1	2.8e-57	194.3	39.6	1.7	1	1	1	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DAO	PF01266.19	gi|332797711|ref|YP_004459211.1|	-	2.8e-12	46.2	0.0	3.7e-12	45.8	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|332797711|ref|YP_004459211.1|	-	5.5e-10	39.1	0.1	2.5e-08	33.8	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|332797711|ref|YP_004459211.1|	-	0.00014	21.0	0.0	0.0003	19.9	0.0	1.5	1	0	0	1	1	1	1	Thi4	family
Pyr_redox_2	PF07992.9	gi|332797711|ref|YP_004459211.1|	-	0.00033	20.5	0.3	0.0011	18.8	0.1	2.1	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797711|ref|YP_004459211.1|	-	0.0025	16.7	4.5	0.0032	16.3	0.0	2.6	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|332797711|ref|YP_004459211.1|	-	0.0036	16.2	0.0	0.019	13.8	0.0	2.0	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|332797711|ref|YP_004459211.1|	-	0.0069	16.4	0.3	0.015	15.3	0.1	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332797711|ref|YP_004459211.1|	-	0.011	14.2	0.4	0.044	12.2	0.0	1.9	2	0	0	2	2	2	0	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332797711|ref|YP_004459211.1|	-	0.026	13.5	0.0	0.056	12.4	0.0	1.5	2	0	0	2	2	2	0	FAD	binding	domain
Amino_oxidase	PF01593.19	gi|332797711|ref|YP_004459211.1|	-	0.028	13.4	0.0	1.1	8.1	0.0	2.3	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|332797711|ref|YP_004459211.1|	-	0.045	13.1	0.1	0.11	11.8	0.1	1.7	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NTPase_I-T	PF01931.13	gi|332797712|ref|YP_004459212.1|	-	8.3e-24	84.2	0.0	9.6e-24	83.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
MFS_1	PF07690.11	gi|332797713|ref|YP_004459213.1|	-	7.2e-14	51.2	44.6	4.4e-07	28.9	20.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
BCCT	PF02028.12	gi|332797715|ref|YP_004459215.1|	-	0.087	11.0	0.6	0.11	10.7	0.4	1.1	1	0	0	1	1	1	0	BCCT	family	transporter
DUF4411	PF14367.1	gi|332797716|ref|YP_004459216.1|	-	0.034	13.8	0.0	0.064	12.9	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
DUF4543	PF15076.1	gi|332797716|ref|YP_004459216.1|	-	0.072	13.1	0.0	0.28	11.2	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4543)
Na_H_antiport_2	PF13726.1	gi|332797717|ref|YP_004459217.1|	-	0.032	14.1	1.1	0.043	13.7	0.7	1.4	1	0	0	1	1	1	0	Na+-H+	antiporter	family
EIID-AGA	PF03613.9	gi|332797717|ref|YP_004459217.1|	-	2	7.2	7.9	0.8	8.5	3.4	1.7	1	1	1	2	2	2	0	PTS	system	mannose/fructose/sorbose	family	IID	component
Na_H_antiport_1	PF06965.7	gi|332797718|ref|YP_004459218.1|	-	3e-05	22.9	2.0	3.9e-05	22.6	1.4	1.2	1	0	0	1	1	1	1	Na+/H+	antiporter	1
Xan_ur_permease	PF00860.15	gi|332797718|ref|YP_004459218.1|	-	0.0024	16.4	2.5	0.0031	16.0	1.7	1.1	1	0	0	1	1	1	1	Permease	family
2TM	PF13239.1	gi|332797718|ref|YP_004459218.1|	-	0.017	15.1	1.8	0.033	14.2	1.3	1.5	1	0	0	1	1	1	0	2TM	domain
DUF1700	PF08006.6	gi|332797718|ref|YP_004459218.1|	-	0.026	13.8	1.7	0.036	13.3	1.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
UPF0126	PF03458.8	gi|332797719|ref|YP_004459219.1|	-	7.1e-45	150.5	13.7	4e-25	87.2	2.9	2.2	2	0	0	2	2	2	2	UPF0126	domain
UPF0542	PF15086.1	gi|332797719|ref|YP_004459219.1|	-	2.7	7.7	4.2	2.9	7.6	0.6	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0542
EamA	PF00892.15	gi|332797720|ref|YP_004459220.1|	-	3.1e-26	91.8	41.2	3.1e-18	66.0	9.4	2.5	2	2	0	2	2	2	2	EamA-like	transporter	family
UAA	PF08449.6	gi|332797720|ref|YP_004459220.1|	-	8.2e-08	31.5	6.8	8.2e-08	31.5	4.7	3.6	3	1	0	3	3	3	1	UAA	transporter	family
EmrE	PF13536.1	gi|332797720|ref|YP_004459220.1|	-	3.4e-05	24.0	32.9	0.001	19.2	4.8	3.4	2	2	1	3	3	3	2	Multidrug	resistance	efflux	transporter
TPT	PF03151.11	gi|332797720|ref|YP_004459220.1|	-	0.00045	19.8	7.0	0.00045	19.8	4.9	3.5	3	1	0	3	3	3	2	Triose-phosphate	Transporter	family
UPF0546	PF10639.4	gi|332797720|ref|YP_004459220.1|	-	0.028	14.2	2.1	0.028	14.2	1.5	3.2	3	1	0	3	3	3	0	Uncharacterised	protein	family	UPF0546
DSPc	PF00782.15	gi|332797721|ref|YP_004459221.1|	-	0.088	12.3	0.6	0.2	11.2	0.1	1.8	2	0	0	2	2	2	0	Dual	specificity	phosphatase,	catalytic	domain
UPF0118	PF01594.11	gi|332797721|ref|YP_004459221.1|	-	0.14	11.1	1.4	0.2	10.5	1.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF20
TPR_11	PF13414.1	gi|332797722|ref|YP_004459222.1|	-	5.3e-38	128.4	19.8	4.5e-15	55.0	1.1	4.4	3	1	1	4	4	4	4	TPR	repeat
TPR_2	PF07719.12	gi|332797722|ref|YP_004459222.1|	-	1.9e-26	89.7	24.9	1.2e-06	27.9	0.3	8.0	6	1	2	8	8	8	6	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|332797722|ref|YP_004459222.1|	-	5.9e-22	76.2	35.0	2.2e-09	36.5	0.7	7.6	8	0	0	8	8	8	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|332797722|ref|YP_004459222.1|	-	7.6e-22	77.4	6.2	1.5e-05	25.5	0.0	4.9	2	2	3	5	5	5	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|332797722|ref|YP_004459222.1|	-	1.8e-19	68.2	10.4	5.9e-05	22.9	0.2	6.6	5	2	2	7	7	7	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|332797722|ref|YP_004459222.1|	-	1.8e-19	69.8	12.3	1.9e-06	28.1	0.0	4.6	2	2	1	4	4	4	4	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|332797722|ref|YP_004459222.1|	-	2e-15	55.8	2.6	0.066	13.8	0.0	7.1	1	1	7	8	8	8	5	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|332797722|ref|YP_004459222.1|	-	1.6e-13	50.3	9.1	2e-06	27.6	0.6	5.1	2	1	3	5	5	5	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|332797722|ref|YP_004459222.1|	-	2.9e-13	48.5	35.7	1e-05	24.9	1.7	7.2	5	2	2	7	7	7	3	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|332797722|ref|YP_004459222.1|	-	7.8e-09	35.5	14.7	0.0043	17.1	0.1	4.3	1	1	3	4	4	4	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.1	gi|332797722|ref|YP_004459222.1|	-	1.3e-07	31.5	14.3	0.11	13.0	0.1	7.1	8	0	0	8	8	8	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|332797722|ref|YP_004459222.1|	-	2.5e-07	30.4	0.3	0.26	11.1	0.0	4.9	1	1	6	7	7	7	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|332797722|ref|YP_004459222.1|	-	3.9e-07	29.3	4.9	0.091	12.5	0.0	5.5	5	1	1	6	6	6	2	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|332797722|ref|YP_004459222.1|	-	5.3e-05	23.2	1.8	2.5	8.2	0.0	4.9	2	2	4	6	6	6	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|332797722|ref|YP_004459222.1|	-	5.3e-05	22.1	12.4	0.0026	16.5	0.8	3.4	1	1	1	3	3	3	2	NMDA	receptor-regulated	protein	1
FAT	PF02259.18	gi|332797722|ref|YP_004459222.1|	-	6.7e-05	22.0	3.9	0.017	14.1	0.2	2.4	1	1	1	2	2	2	2	FAT	domain
MIT	PF04212.13	gi|332797722|ref|YP_004459222.1|	-	9.6e-05	22.1	13.3	0.00035	20.4	1.2	4.0	3	2	1	4	4	4	1	MIT	(microtubule	interacting	and	transport)	domain
BTAD	PF03704.12	gi|332797722|ref|YP_004459222.1|	-	9.8e-05	22.6	0.5	1.7	8.9	0.0	3.6	1	1	2	4	4	4	1	Bacterial	transcriptional	activator	domain
Clathrin	PF00637.15	gi|332797722|ref|YP_004459222.1|	-	0.00036	20.1	5.1	0.00036	20.1	3.5	3.0	2	1	1	3	3	3	1	Region	in	Clathrin	and	VPS
TPR_21	PF09976.4	gi|332797722|ref|YP_004459222.1|	-	0.0024	17.8	2.5	2.1	8.3	0.0	3.7	2	2	0	3	3	3	1	Tetratricopeptide	repeat
YfdX	PF10938.3	gi|332797722|ref|YP_004459222.1|	-	0.041	13.5	6.0	14	5.3	0.0	4.4	2	2	1	4	4	4	0	YfdX	protein
Cas_Cas02710	PF09670.5	gi|332797722|ref|YP_004459222.1|	-	0.11	11.0	7.5	0.1	11.1	0.2	2.3	1	1	1	2	2	2	0	CRISPR-associated	protein	(Cas_Cas02710)
DUF3856	PF12968.2	gi|332797722|ref|YP_004459222.1|	-	0.13	12.0	5.2	9.9	5.9	0.2	3.7	2	2	1	4	4	4	0	Domain	of	Unknown	Function	(DUF3856)
PPR	PF01535.15	gi|332797722|ref|YP_004459222.1|	-	0.13	12.2	7.0	30	4.8	0.2	4.9	5	1	0	5	5	5	0	PPR	repeat
DUF3832	PF12909.2	gi|332797722|ref|YP_004459222.1|	-	0.14	12.2	9.5	0.24	11.4	0.7	3.3	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF3832)
Alkyl_sulf_dimr	PF14863.1	gi|332797722|ref|YP_004459222.1|	-	0.17	12.1	3.7	0.91	9.7	0.1	3.0	2	1	2	4	4	3	0	Alkyl	sulfatase	dimerisation
BRO1	PF03097.13	gi|332797722|ref|YP_004459222.1|	-	0.19	10.4	4.9	0.28	9.8	0.7	2.1	2	0	0	2	2	2	0	BRO1-like	domain
DUF4363	PF14276.1	gi|332797722|ref|YP_004459222.1|	-	0.4	10.3	7.6	3.7	7.2	0.2	3.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4363)
DUF4398	PF14346.1	gi|332797722|ref|YP_004459222.1|	-	1.6	8.8	9.1	4.8	7.2	1.0	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4398)
Pkinase	PF00069.20	gi|332797723|ref|YP_004459223.1|	-	1.5e-28	99.6	0.1	2.2e-28	99.1	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|332797723|ref|YP_004459223.1|	-	7.6e-11	41.5	0.0	2e-10	40.2	0.0	1.6	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Peptidase_C97	PF05903.9	gi|332797723|ref|YP_004459223.1|	-	0.0033	17.2	0.6	0.01	15.6	0.4	1.8	1	0	0	1	1	1	1	PPPDE	putative	peptidase	domain
DUF1955	PF09205.5	gi|332797723|ref|YP_004459223.1|	-	0.016	14.7	0.8	0.04	13.4	0.6	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1955)
DnaB_2	PF07261.6	gi|332797723|ref|YP_004459223.1|	-	0.082	12.5	0.3	0.88	9.2	0.0	2.8	2	0	0	2	2	2	0	Replication	initiation	and	membrane	attachment
BcrAD_BadFG	PF01869.15	gi|332797724|ref|YP_004459224.1|	-	5.9e-36	124.1	1.0	7.7e-36	123.7	0.7	1.1	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.1	gi|332797724|ref|YP_004459224.1|	-	0.0031	17.3	0.1	0.0059	16.4	0.1	1.6	1	1	0	1	1	1	1	Cell	division	protein	FtsA
Methyltransf_8	PF05148.10	gi|332797724|ref|YP_004459224.1|	-	0.0081	15.8	0.4	0.64	9.5	0.0	3.0	2	1	0	3	3	3	1	Hypothetical	methyltransferase
CCG	PF02754.11	gi|332797725|ref|YP_004459225.1|	-	1.6e-11	44.0	0.0	2.2e-06	27.5	0.0	2.5	2	0	0	2	2	2	2	Cysteine-rich	domain
PARP_reg	PF02877.9	gi|332797725|ref|YP_004459225.1|	-	0.1	12.2	0.0	0.35	10.5	0.0	1.9	2	0	0	2	2	2	0	Poly(ADP-ribose)	polymerase,	regulatory	domain
DUF162	PF02589.10	gi|332797726|ref|YP_004459226.1|	-	1.9e-51	174.2	0.2	2.8e-51	173.7	0.1	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|332797726|ref|YP_004459226.1|	-	4.3e-10	39.4	2.4	7.4e-10	38.7	1.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|332797726|ref|YP_004459226.1|	-	2.1e-07	31.2	2.5	0.004	17.5	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332797726|ref|YP_004459226.1|	-	3.1e-06	27.4	3.3	1.2e-05	25.5	2.5	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797726|ref|YP_004459226.1|	-	2.3e-05	24.6	3.6	5.1e-05	23.5	2.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332797726|ref|YP_004459226.1|	-	3.3e-05	23.5	4.9	0.00076	19.2	4.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797726|ref|YP_004459226.1|	-	0.00047	20.3	5.8	0.038	14.2	5.4	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|332797726|ref|YP_004459226.1|	-	0.0005	19.6	0.7	0.14	11.7	0.0	2.5	2	0	0	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_6	PF12837.2	gi|332797726|ref|YP_004459226.1|	-	0.00097	18.9	10.3	0.0095	15.7	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|332797726|ref|YP_004459226.1|	-	0.0043	16.5	8.9	0.02	14.4	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Toxin_64	PF15542.1	gi|332797726|ref|YP_004459226.1|	-	0.015	15.8	0.1	0.032	14.8	0.0	1.5	1	0	0	1	1	1	0	Putative	toxin	64
DUF1574	PF07611.6	gi|332797726|ref|YP_004459226.1|	-	0.035	12.9	0.0	0.058	12.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1574)
AAA_14	PF13173.1	gi|332797726|ref|YP_004459226.1|	-	0.041	13.7	0.0	0.083	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Fer4_21	PF14697.1	gi|332797726|ref|YP_004459226.1|	-	0.094	12.5	7.8	0.6	10.0	5.4	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|332797726|ref|YP_004459226.1|	-	0.14	12.5	7.0	0.49	10.8	0.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|332797726|ref|YP_004459226.1|	-	0.32	10.9	7.1	0.88	9.6	0.8	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|332797726|ref|YP_004459226.1|	-	0.35	11.6	8.5	2.2	9.0	5.9	2.2	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|332797726|ref|YP_004459226.1|	-	1.5	9.5	11.1	9.9	7.0	2.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
PIN	PF01850.16	gi|332797727|ref|YP_004459227.1|	-	2.5e-18	66.5	3.6	3e-18	66.2	2.5	1.1	1	0	0	1	1	1	1	PIN	domain
RHH_1	PF01402.16	gi|332797728|ref|YP_004459228.1|	-	0.00072	19.3	3.2	0.00084	19.1	0.3	2.2	1	1	2	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
ScpA_ScpB	PF02616.9	gi|332797728|ref|YP_004459228.1|	-	0.045	13.3	0.6	0.051	13.1	0.4	1.1	1	0	0	1	1	1	0	ScpA/B	protein
Mt_ATP-synt_D	PF05873.7	gi|332797728|ref|YP_004459228.1|	-	0.074	12.6	0.2	0.081	12.5	0.1	1.2	1	0	0	1	1	1	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
DUF4602	PF15375.1	gi|332797728|ref|YP_004459228.1|	-	0.12	12.4	0.4	0.13	12.3	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4602)
UMPH-1	PF05822.7	gi|332797728|ref|YP_004459228.1|	-	0.13	11.6	0.2	0.13	11.5	0.1	1.1	1	0	0	1	1	1	0	Pyrimidine	5'-nucleotidase	(UMPH-1)
DUF217	PF02697.9	gi|332797728|ref|YP_004459228.1|	-	0.23	11.7	3.3	0.37	11.0	2.3	1.4	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1753
Voltage_CLC	PF00654.15	gi|332797729|ref|YP_004459229.1|	-	8.4e-79	265.1	34.8	6.7e-78	262.1	20.0	2.0	2	0	0	2	2	2	2	Voltage	gated	chloride	channel
CBS	PF00571.23	gi|332797729|ref|YP_004459229.1|	-	1.1e-16	60.3	0.0	1.6e-08	34.1	0.0	2.5	2	0	0	2	2	2	2	CBS	domain
HEPN	PF05168.9	gi|332797730|ref|YP_004459230.1|	-	0.0022	17.8	4.4	0.0038	17.1	3.0	1.3	1	1	0	1	1	1	1	HEPN	domain
DUF2089	PF09862.4	gi|332797730|ref|YP_004459230.1|	-	0.023	14.4	0.1	0.038	13.7	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
DUF4145	PF13643.1	gi|332797730|ref|YP_004459230.1|	-	0.14	12.0	0.5	0.26	11.1	0.3	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4145)
Cyanate_lyase	PF02560.9	gi|332797731|ref|YP_004459231.1|	-	0.024	14.1	0.5	3.4	7.2	0.1	2.4	2	0	0	2	2	2	0	Cyanate	lyase	C-terminal	domain
PPR	PF01535.15	gi|332797731|ref|YP_004459231.1|	-	0.059	13.3	0.0	0.14	12.2	0.0	1.5	1	0	0	1	1	1	0	PPR	repeat
YhfZ_C	PF14503.1	gi|332797731|ref|YP_004459231.1|	-	0.065	12.5	2.3	0.18	11.1	0.2	2.0	2	0	0	2	2	2	0	YhfZ	C-terminal	domain
ATP-grasp_5	PF13549.1	gi|332797732|ref|YP_004459232.1|	-	1.8e-48	164.6	0.8	3.5e-48	163.7	0.6	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|332797732|ref|YP_004459232.1|	-	6.1e-47	158.6	0.7	4.2e-45	152.7	0.0	2.6	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|332797732|ref|YP_004459232.1|	-	8.6e-26	90.3	0.1	3.6e-24	85.1	0.0	2.8	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|332797732|ref|YP_004459232.1|	-	5.6e-14	52.4	0.4	2.6e-13	50.3	0.3	2.2	1	0	0	1	1	1	1	CoA	binding	domain
RimK	PF08443.6	gi|332797732|ref|YP_004459232.1|	-	5.1e-06	26.0	0.4	1.2e-05	24.8	0.3	1.6	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|332797732|ref|YP_004459232.1|	-	9.2e-05	21.9	1.5	0.0023	17.3	1.0	2.7	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|332797732|ref|YP_004459232.1|	-	0.00029	20.4	0.2	0.00087	18.8	0.1	1.8	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_4	PF13535.1	gi|332797732|ref|YP_004459232.1|	-	0.0003	20.5	0.0	0.00053	19.7	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GFO_IDH_MocA	PF01408.17	gi|332797732|ref|YP_004459232.1|	-	0.0027	18.1	0.2	0.14	12.6	0.0	2.9	3	0	0	3	3	3	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ATP-grasp	PF02222.17	gi|332797732|ref|YP_004459232.1|	-	0.0089	15.3	0.7	0.023	14.0	0.1	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|332797732|ref|YP_004459232.1|	-	0.01	15.2	0.2	0.021	14.1	0.2	1.6	1	0	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
Chaperone_III	PF07824.7	gi|332797732|ref|YP_004459232.1|	-	0.033	14.1	0.0	0.099	12.5	0.0	1.8	2	0	0	2	2	2	0	Type	III	secretion	chaperone	domain
CPSase_L_D2	PF02786.12	gi|332797732|ref|YP_004459232.1|	-	0.046	13.0	0.0	0.088	12.0	0.0	1.4	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Lactamase_B	PF00753.22	gi|332797733|ref|YP_004459233.1|	-	7.7e-20	71.3	4.1	1.2e-18	67.4	2.0	2.0	1	1	1	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|332797733|ref|YP_004459233.1|	-	2.7e-05	23.8	0.1	5.1e-05	22.9	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
AA_permease_2	PF13520.1	gi|332797734|ref|YP_004459234.1|	-	4.9e-37	127.4	62.8	4.9e-37	127.4	43.5	2.2	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332797734|ref|YP_004459234.1|	-	3.7e-31	108.0	49.9	3.7e-31	108.0	34.6	2.3	2	0	0	2	2	2	2	Amino	acid	permease
AMP-binding	PF00501.23	gi|332797735|ref|YP_004459235.1|	-	2.2e-84	283.2	0.0	2.9e-84	282.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|332797735|ref|YP_004459235.1|	-	1.8e-22	80.0	0.5	3.8e-22	79.0	0.4	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
ADH_N	PF08240.7	gi|332797736|ref|YP_004459236.1|	-	3.9e-23	81.2	1.4	3.9e-23	81.2	1.0	1.7	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|332797736|ref|YP_004459236.1|	-	0.0022	17.5	0.0	0.0043	16.5	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
FAD_binding_3	PF01494.14	gi|332797736|ref|YP_004459236.1|	-	0.0069	15.4	0.0	0.011	14.7	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|332797736|ref|YP_004459236.1|	-	0.016	15.1	0.0	0.028	14.3	0.0	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|332797736|ref|YP_004459236.1|	-	0.018	14.4	0.0	0.035	13.5	0.0	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
2-Hacid_dh_C	PF02826.14	gi|332797736|ref|YP_004459236.1|	-	0.11	11.6	0.0	0.21	10.6	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
CC	PF04942.9	gi|332797737|ref|YP_004459237.1|	-	0.083	12.7	0.4	9.7	6.1	0.0	2.8	2	0	0	2	2	2	0	CC	domain
DUF1180	PF06679.7	gi|332797737|ref|YP_004459237.1|	-	0.096	12.5	0.3	0.22	11.4	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1180)
Epimerase	PF01370.16	gi|332797738|ref|YP_004459238.1|	-	1e-38	133.1	0.1	1.6e-38	132.4	0.1	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|332797738|ref|YP_004459238.1|	-	8.8e-12	44.4	0.0	1e-11	44.3	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.7	gi|332797738|ref|YP_004459238.1|	-	3.6e-11	42.4	0.2	1.1e-07	31.0	0.0	2.1	1	1	0	2	2	2	2	Male	sterility	protein
3Beta_HSD	PF01073.14	gi|332797738|ref|YP_004459238.1|	-	2.6e-09	36.2	0.5	7.4e-09	34.7	0.3	1.7	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|332797738|ref|YP_004459238.1|	-	3.9e-07	29.2	1.4	6.8e-05	21.9	1.0	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
adh_short	PF00106.20	gi|332797738|ref|YP_004459238.1|	-	5.8e-06	26.3	0.0	0.0019	18.1	0.0	2.2	2	0	0	2	2	2	2	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|332797738|ref|YP_004459238.1|	-	0.00073	19.5	0.0	0.0019	18.2	0.0	1.7	2	0	0	2	2	2	1	NADH(P)-binding
KR	PF08659.5	gi|332797738|ref|YP_004459238.1|	-	0.0036	16.9	0.0	0.084	12.5	0.0	2.1	2	0	0	2	2	2	1	KR	domain
ELFV_dehydrog	PF00208.16	gi|332797738|ref|YP_004459238.1|	-	0.079	12.5	0.9	0.15	11.5	0.4	1.7	1	1	1	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Sre	PF03125.13	gi|332797739|ref|YP_004459239.1|	-	0.17	10.7	8.1	0.19	10.6	5.6	1.0	1	0	0	1	1	1	0	C.	elegans	Sre	G	protein-coupled	chemoreceptor
Pox_polyA_pol	PF03296.8	gi|332797739|ref|YP_004459239.1|	-	0.17	11.4	5.4	0.2	11.1	3.8	1.0	1	0	0	1	1	1	0	Poxvirus	poly(A)	polymerase	nucleotidyltransferase	domain
Virul_fac_BrkB	PF03631.10	gi|332797739|ref|YP_004459239.1|	-	0.19	11.0	6.1	0.19	11.0	4.3	1.0	1	0	0	1	1	1	0	Virulence	factor	BrkB
Nbas_N	PF15492.1	gi|332797740|ref|YP_004459240.1|	-	0.48	9.4	3.8	0.25	10.4	0.6	1.8	2	0	0	2	2	2	0	Neuroblastoma-amplified	sequence,	N	terminal
Claudin_2	PF13903.1	gi|332797740|ref|YP_004459240.1|	-	4	7.0	20.3	1.4	8.5	3.0	2.4	1	1	1	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF747	PF05346.6	gi|332797741|ref|YP_004459241.1|	-	0.49	9.3	6.5	0.53	9.2	4.5	1.4	1	1	0	1	1	1	0	Eukaryotic	membrane	protein	family
ABC_tran	PF00005.22	gi|332797742|ref|YP_004459242.1|	-	4.3e-22	78.8	0.4	1.8e-07	31.4	0.0	3.4	2	1	1	3	3	3	3	ABC	transporter
AAA_21	PF13304.1	gi|332797742|ref|YP_004459242.1|	-	1.4e-12	48.2	8.6	0.0003	20.8	0.0	3.6	2	2	2	4	4	4	3	AAA	domain
AAA_15	PF13175.1	gi|332797742|ref|YP_004459242.1|	-	3.1e-05	23.2	4.4	0.055	12.5	0.2	3.3	1	1	2	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797742|ref|YP_004459242.1|	-	0.00097	19.2	0.0	0.002	18.2	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|332797742|ref|YP_004459242.1|	-	0.0011	18.7	0.0	0.2	11.6	0.0	2.6	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
Miro	PF08477.8	gi|332797742|ref|YP_004459242.1|	-	0.0018	18.7	0.0	0.0057	17.1	0.0	1.9	1	0	0	1	1	1	1	Miro-like	protein
AAA	PF00004.24	gi|332797742|ref|YP_004459242.1|	-	0.0025	18.0	0.1	0.0066	16.6	0.1	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|332797742|ref|YP_004459242.1|	-	0.0035	17.2	1.1	0.012	15.4	0.1	2.4	2	2	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|332797742|ref|YP_004459242.1|	-	0.0039	16.0	0.1	0.0073	15.2	0.1	1.5	1	0	0	1	1	1	1	NB-ARC	domain
SMC_N	PF02463.14	gi|332797742|ref|YP_004459242.1|	-	0.0042	16.3	0.7	4.6	6.3	0.0	3.6	2	1	2	4	4	4	1	RecF/RecN/SMC	N	terminal	domain
NACHT	PF05729.7	gi|332797742|ref|YP_004459242.1|	-	0.014	15.0	0.1	0.041	13.5	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|332797742|ref|YP_004459242.1|	-	0.02	14.5	0.0	0.043	13.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|332797742|ref|YP_004459242.1|	-	0.02	15.2	2.8	0.039	14.2	0.0	2.6	2	1	1	3	3	3	0	AAA	domain
AAA_29	PF13555.1	gi|332797742|ref|YP_004459242.1|	-	0.031	13.8	0.1	0.077	12.5	0.0	1.6	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|332797742|ref|YP_004459242.1|	-	0.035	13.2	0.0	0.06	12.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|332797742|ref|YP_004459242.1|	-	0.045	14.5	0.8	0.2	12.4	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|332797742|ref|YP_004459242.1|	-	0.046	13.7	0.1	0.097	12.6	0.1	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
SRP54	PF00448.17	gi|332797742|ref|YP_004459242.1|	-	0.054	12.9	0.1	0.12	11.7	0.1	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_25	PF13481.1	gi|332797742|ref|YP_004459242.1|	-	0.066	12.6	0.0	0.15	11.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|332797742|ref|YP_004459242.1|	-	0.07	12.8	0.7	0.71	9.5	0.4	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|332797742|ref|YP_004459242.1|	-	0.16	11.7	0.0	0.35	10.6	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_23	PF13476.1	gi|332797742|ref|YP_004459242.1|	-	5.5	7.2	9.3	2	8.6	0.7	2.4	1	1	1	2	2	2	0	AAA	domain
Hjc	PF01870.13	gi|332797743|ref|YP_004459243.1|	-	9.1e-19	66.8	0.0	1.1e-18	66.5	0.0	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
Haem_bd	PF14376.1	gi|332797743|ref|YP_004459243.1|	-	0.073	12.7	0.1	0.14	11.8	0.0	1.5	1	1	0	1	1	1	0	Haem-binding	domain
Endonuc-MspI	PF09208.5	gi|332797743|ref|YP_004459243.1|	-	0.1	11.6	0.0	0.12	11.4	0.0	1.1	1	0	0	1	1	1	0	Restriction	endonuclease	MspI
HTH_24	PF13412.1	gi|332797744|ref|YP_004459244.1|	-	5.2e-18	64.1	0.2	8e-14	50.7	0.1	2.6	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|332797744|ref|YP_004459244.1|	-	2.1e-12	46.3	0.0	4.5e-09	35.7	0.0	2.4	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|332797744|ref|YP_004459244.1|	-	5.6e-07	29.1	0.6	0.00048	19.7	0.0	2.5	2	0	0	2	2	2	2	HTH	domain
MarR	PF01047.17	gi|332797744|ref|YP_004459244.1|	-	1.1e-06	28.2	0.2	0.054	13.1	0.0	2.7	3	0	0	3	3	3	2	MarR	family
MarR_2	PF12802.2	gi|332797744|ref|YP_004459244.1|	-	4.3e-05	23.1	0.0	0.0035	16.9	0.0	2.4	2	1	0	2	2	2	1	MarR	family
TrmB	PF01978.14	gi|332797744|ref|YP_004459244.1|	-	6e-05	22.6	0.7	0.15	11.7	0.1	2.6	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|332797744|ref|YP_004459244.1|	-	0.00043	19.8	0.0	0.14	11.8	0.0	2.5	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_DeoR	PF08220.7	gi|332797744|ref|YP_004459244.1|	-	0.00084	18.8	0.1	0.0021	17.5	0.1	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_36	PF13730.1	gi|332797744|ref|YP_004459244.1|	-	0.0012	18.9	0.2	0.92	9.6	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_10	PF04967.7	gi|332797744|ref|YP_004459244.1|	-	0.0027	17.2	0.1	0.73	9.4	0.0	2.6	2	0	0	2	2	2	1	HTH	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|332797744|ref|YP_004459244.1|	-	0.0037	16.7	0.2	1.1	8.7	0.0	2.4	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.1	gi|332797744|ref|YP_004459244.1|	-	0.0045	16.1	0.0	3.1	7.0	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain	of	transposase	family	ISL3
RepL	PF05732.6	gi|332797744|ref|YP_004459244.1|	-	0.011	14.9	0.0	1.7	7.8	0.0	2.3	2	0	0	2	2	2	0	Firmicute	plasmid	replication	protein	(RepL)
B-block_TFIIIC	PF04182.7	gi|332797744|ref|YP_004459244.1|	-	0.015	15.1	0.8	0.067	13.0	0.0	2.4	3	0	0	3	3	3	0	B-block	binding	subunit	of	TFIIIC
HTH_Crp_2	PF13545.1	gi|332797744|ref|YP_004459244.1|	-	0.018	14.8	0.0	1.2	9.0	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Mga	PF05043.8	gi|332797744|ref|YP_004459244.1|	-	0.043	14.1	0.4	1.1	9.5	0.0	2.4	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
GerE	PF00196.14	gi|332797744|ref|YP_004459244.1|	-	0.044	13.1	0.1	0.44	9.8	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
DUF4423	PF14394.1	gi|332797744|ref|YP_004459244.1|	-	0.052	13.0	0.0	5.8	6.4	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_12	PF08461.5	gi|332797744|ref|YP_004459244.1|	-	0.057	13.1	0.4	0.52	10.0	0.1	2.3	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_23	PF13384.1	gi|332797744|ref|YP_004459244.1|	-	0.078	12.6	0.2	10	5.9	0.0	2.3	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|332797744|ref|YP_004459244.1|	-	0.085	12.8	0.0	1.4	9.0	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|332797744|ref|YP_004459244.1|	-	0.13	12.2	0.2	15	5.6	0.0	2.3	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
UPF0547	PF10571.4	gi|332797745|ref|YP_004459245.1|	-	0.00012	21.6	11.7	0.00027	20.5	8.1	1.6	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|332797745|ref|YP_004459245.1|	-	0.00044	19.3	0.9	0.00086	18.4	0.7	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|332797745|ref|YP_004459245.1|	-	0.0023	17.1	0.3	0.003	16.6	0.2	1.2	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
OrfB_Zn_ribbon	PF07282.6	gi|332797745|ref|YP_004459245.1|	-	0.0083	15.7	1.4	0.092	12.4	0.9	2.0	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
HypA	PF01155.14	gi|332797745|ref|YP_004459245.1|	-	0.0089	15.7	0.2	0.0097	15.5	0.2	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
Auto_anti-p27	PF06677.7	gi|332797745|ref|YP_004459245.1|	-	0.013	15.2	3.1	0.6	9.9	0.1	2.2	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DZR	PF12773.2	gi|332797745|ref|YP_004459245.1|	-	0.014	15.2	1.1	0.036	13.8	0.8	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2072	PF09845.4	gi|332797745|ref|YP_004459245.1|	-	0.014	15.3	0.3	0.015	15.2	0.2	1.2	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
zinc_ribbon_2	PF13240.1	gi|332797745|ref|YP_004459245.1|	-	0.017	14.6	1.2	0.069	12.6	0.9	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF2256	PF10013.4	gi|332797745|ref|YP_004459245.1|	-	0.019	14.7	2.4	3.6	7.4	0.5	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Nudix_N_2	PF14803.1	gi|332797745|ref|YP_004459245.1|	-	0.019	14.6	4.7	0.088	12.5	2.9	2.1	1	1	1	2	2	2	0	Nudix	N-terminal
zf-NADH-PPase	PF09297.6	gi|332797745|ref|YP_004459245.1|	-	0.039	13.4	0.6	0.69	9.4	0.0	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|332797745|ref|YP_004459245.1|	-	0.043	13.8	2.4	2.6	8.1	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2	PF00096.21	gi|332797745|ref|YP_004459245.1|	-	0.06	13.7	2.1	1.8	9.0	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
A2L_zn_ribbon	PF08792.5	gi|332797745|ref|YP_004459245.1|	-	0.08	12.4	4.5	0.93	9.0	3.1	2.2	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF2225	PF09986.4	gi|332797745|ref|YP_004459245.1|	-	0.081	12.3	5.7	0.74	9.2	0.5	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
DUF2387	PF09526.5	gi|332797745|ref|YP_004459245.1|	-	0.1	12.5	0.4	0.092	12.6	0.2	1.1	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
YhfH	PF14149.1	gi|332797745|ref|YP_004459245.1|	-	0.16	11.7	1.7	3.8	7.3	0.0	2.1	2	0	0	2	2	2	0	YhfH-like	protein
DUF329	PF03884.9	gi|332797745|ref|YP_004459245.1|	-	0.22	11.0	1.6	2.9	7.5	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
zf-H2C2_2	PF13465.1	gi|332797745|ref|YP_004459245.1|	-	0.24	11.7	4.4	1.4	9.3	0.2	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
zf-C4_Topoisom	PF01396.14	gi|332797745|ref|YP_004459245.1|	-	0.3	10.6	2.1	1.7	8.1	0.1	2.1	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
TF_Zn_Ribbon	PF08271.7	gi|332797745|ref|YP_004459245.1|	-	0.37	10.1	8.1	1.7	8.0	5.6	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
zf-RING_3	PF14369.1	gi|332797745|ref|YP_004459245.1|	-	0.39	10.7	3.6	2	8.5	2.8	1.8	1	1	1	2	2	2	0	zinc-finger
zf-FPG_IleRS	PF06827.9	gi|332797745|ref|YP_004459245.1|	-	0.53	9.9	6.0	9.7	5.9	4.4	2.1	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Prok-RING_1	PF14446.1	gi|332797745|ref|YP_004459245.1|	-	0.66	9.7	7.3	1.6	8.5	5.1	1.6	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Rubredoxin	PF00301.15	gi|332797745|ref|YP_004459245.1|	-	0.69	9.8	5.8	8.2	6.3	0.5	2.1	1	1	1	2	2	2	0	Rubredoxin
Zn_Tnp_IS1595	PF12760.2	gi|332797745|ref|YP_004459245.1|	-	0.72	9.7	2.9	0.69	9.7	0.5	1.8	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Cys_rich_CPCC	PF14206.1	gi|332797745|ref|YP_004459245.1|	-	0.75	9.3	3.3	4.8	6.7	0.1	2.2	1	1	0	1	1	1	0	Cysteine-rich	CPCC
Zn-ribbon_8	PF09723.5	gi|332797745|ref|YP_004459245.1|	-	0.83	9.6	5.3	23	5.0	0.4	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
ADK_lid	PF05191.9	gi|332797745|ref|YP_004459245.1|	-	1.1	9.0	3.3	13	5.5	0.2	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF3039	PF11238.3	gi|332797745|ref|YP_004459245.1|	-	1.2	8.6	6.2	7.7	6.0	0.7	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3039)
zf-C3HC4_3	PF13920.1	gi|332797745|ref|YP_004459245.1|	-	2.3	7.9	5.5	1.2	8.8	0.6	2.0	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
DNA_ligase_ZBD	PF03119.11	gi|332797745|ref|YP_004459245.1|	-	8	6.2	9.8	11	5.8	0.9	2.4	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Aconitase	PF00330.15	gi|332797746|ref|YP_004459246.1|	-	5.3e-67	226.2	2.4	1.4e-41	142.5	0.1	2.4	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|332797746|ref|YP_004459246.1|	-	0.0066	15.0	0.0	0.011	14.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Aconitase_C	PF00694.14	gi|332797747|ref|YP_004459247.1|	-	1.9e-22	79.7	0.0	2.8e-22	79.2	0.0	1.3	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
IlvN	PF07991.7	gi|332797747|ref|YP_004459247.1|	-	0.0058	16.0	0.1	0.0081	15.5	0.1	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Aconitase_2_N	PF06434.8	gi|332797747|ref|YP_004459247.1|	-	0.0071	15.7	2.3	0.39	10.0	1.6	2.1	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Nitroreductase	PF00881.19	gi|332797748|ref|YP_004459248.1|	-	3.4e-30	105.0	0.0	4.4e-30	104.6	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
DUF1959	PF09218.5	gi|332797748|ref|YP_004459248.1|	-	0.12	12.1	0.3	0.2	11.4	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1959)
PaREP1	PF05942.6	gi|332797749|ref|YP_004459249.1|	-	3.1e-17	62.4	0.0	4.3e-17	62.0	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|332797749|ref|YP_004459249.1|	-	0.023	14.6	0.4	0.034	14.0	0.3	1.6	1	1	0	1	1	1	0	HEPN	domain
UPF0302	PF08864.5	gi|332797749|ref|YP_004459249.1|	-	0.026	14.3	0.0	0.064	13.0	0.0	1.7	2	1	0	2	2	2	0	UPF0302	domain
PaREP1	PF05942.6	gi|332797750|ref|YP_004459250.1|	-	4.1e-17	62.1	4.6	5.4e-17	61.7	3.2	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
PNK3P	PF08645.6	gi|332797750|ref|YP_004459250.1|	-	0.017	14.5	0.4	0.022	14.2	0.3	1.4	1	1	0	1	1	1	0	Polynucleotide	kinase	3	phosphatase
DUF4398	PF14346.1	gi|332797750|ref|YP_004459250.1|	-	0.036	14.1	0.4	0.063	13.3	0.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
HEPN	PF05168.9	gi|332797750|ref|YP_004459250.1|	-	0.051	13.4	2.9	0.069	13.0	2.0	1.2	1	0	0	1	1	1	0	HEPN	domain
DUF357	PF04010.8	gi|332797750|ref|YP_004459250.1|	-	0.058	13.0	4.3	0.34	10.6	0.0	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF357)
HHV6-IE	PF03753.8	gi|332797750|ref|YP_004459250.1|	-	0.074	10.5	1.2	0.38	8.1	0.1	1.9	1	1	1	2	2	2	0	Human	herpesvirus	6	immediate	early	protein
TPR_11	PF13414.1	gi|332797750|ref|YP_004459250.1|	-	0.083	12.5	1.0	0.16	11.6	0.7	1.5	1	0	0	1	1	1	0	TPR	repeat
AIRS_C	PF02769.17	gi|332797752|ref|YP_004459252.1|	-	5.3e-19	68.7	0.1	1.2e-18	67.6	0.0	1.5	2	0	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|332797752|ref|YP_004459252.1|	-	1.4e-07	31.6	0.0	2.5e-07	30.8	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF123	PF01986.11	gi|332797753|ref|YP_004459253.1|	-	1.5e-19	69.9	0.0	1.9e-19	69.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
GIY-YIG	PF01541.19	gi|332797753|ref|YP_004459253.1|	-	0.071	13.4	0.1	0.096	13.0	0.0	1.4	1	0	0	1	1	1	0	GIY-YIG	catalytic	domain
DUF3134	PF11332.3	gi|332797754|ref|YP_004459254.1|	-	0.7	10.0	3.1	1.1	9.4	1.9	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3134)
PNGaseA	PF12222.3	gi|332797755|ref|YP_004459255.1|	-	3.4e-121	405.0	5.0	4.5e-121	404.6	3.4	1.1	1	0	0	1	1	1	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
Pro-kuma_activ	PF09286.6	gi|332797756|ref|YP_004459256.1|	-	2.8e-13	50.1	0.0	6e-13	49.0	0.0	1.5	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Exo_endo_phos	PF03372.18	gi|332797757|ref|YP_004459257.1|	-	3e-22	79.7	0.0	3.8e-22	79.4	0.0	1.1	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|332797757|ref|YP_004459257.1|	-	4.8e-14	52.0	0.0	6.5e-14	51.5	0.0	1.2	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
Nitro_FeMo-Co	PF02579.12	gi|332797758|ref|YP_004459258.1|	-	1.3e-12	47.5	0.1	1.7e-12	47.2	0.1	1.2	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
DrsE	PF02635.10	gi|332797759|ref|YP_004459259.1|	-	1.2e-15	57.6	0.1	1.3e-15	57.5	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|332797759|ref|YP_004459259.1|	-	3.3e-05	23.7	0.1	4.1e-05	23.3	0.1	1.2	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
Aminotran_5	PF00266.14	gi|332797760|ref|YP_004459260.1|	-	3.9e-31	108.1	0.0	5e-31	107.7	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
NAD_binding_7	PF13241.1	gi|332797760|ref|YP_004459260.1|	-	0.027	14.7	0.0	0.05	13.8	0.0	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
FB_lectin	PF07367.6	gi|332797760|ref|YP_004459260.1|	-	0.077	12.6	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	Fungal	fruit	body	lectin
Phosphodiest	PF01663.17	gi|332797761|ref|YP_004459261.1|	-	4.6e-19	68.9	0.0	5.4e-17	62.1	0.0	2.1	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|332797761|ref|YP_004459261.1|	-	4.6e-09	36.2	0.0	0.00023	20.8	0.0	2.3	2	0	0	2	2	2	2	PglZ	domain
Metalloenzyme	PF01676.13	gi|332797761|ref|YP_004459261.1|	-	0.023	14.0	0.1	0.18	11.1	0.0	2.1	2	0	0	2	2	2	0	Metalloenzyme	superfamily
DUF973	PF06157.6	gi|332797762|ref|YP_004459262.1|	-	1.3e-21	76.8	2.2	3.7e-21	75.3	1.6	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
MFS_2	PF13347.1	gi|332797762|ref|YP_004459262.1|	-	0.018	13.4	12.4	0.034	12.5	8.4	1.5	1	1	1	2	2	2	0	MFS/sugar	transport	protein
HEPN	PF05168.9	gi|332797763|ref|YP_004459263.1|	-	0.0003	20.6	0.7	0.00032	20.5	0.5	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF2527	PF10736.4	gi|332797763|ref|YP_004459263.1|	-	1.5	8.5	4.6	10	5.7	3.2	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2627)
NTP_transf_2	PF01909.18	gi|332797764|ref|YP_004459264.1|	-	1.9e-13	50.5	2.3	2.1e-13	50.4	1.6	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
MdcG	PF10620.4	gi|332797764|ref|YP_004459264.1|	-	0.067	12.7	0.0	0.086	12.3	0.0	1.3	1	1	0	1	1	1	0	Phosphoribosyl-dephospho-CoA	transferase	MdcG
QRPTase_C	PF01729.14	gi|332797765|ref|YP_004459265.1|	-	8.6e-63	210.8	0.6	1.1e-62	210.5	0.4	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|332797765|ref|YP_004459265.1|	-	3.9e-16	58.6	0.0	9.7e-16	57.3	0.0	1.7	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
GATase	PF00117.23	gi|332797766|ref|YP_004459266.1|	-	1.4e-38	132.2	0.1	1.6e-38	132.1	0.1	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|332797766|ref|YP_004459266.1|	-	6.6e-12	45.3	0.2	2.4e-11	43.4	0.1	2.0	1	1	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|332797766|ref|YP_004459266.1|	-	0.023	14.3	0.1	0.32	10.5	0.1	2.1	1	1	0	1	1	1	0	SNO	glutamine	amidotransferase	family
DUF3834	PF12916.2	gi|332797767|ref|YP_004459267.1|	-	1.3e-55	187.5	0.0	1.5e-55	187.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
TENA_THI-4	PF03070.11	gi|332797768|ref|YP_004459268.1|	-	8e-41	140.0	1.5	9.7e-41	139.8	1.1	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Cas_NE0113	PF09623.5	gi|332797769|ref|YP_004459269.1|	-	5.4e-07	29.3	0.0	1.6e-06	27.7	0.0	1.9	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|332797769|ref|YP_004459269.1|	-	0.0053	15.4	0.1	0.0079	14.8	0.1	1.3	1	1	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
RE_AlwI	PF09491.5	gi|332797769|ref|YP_004459269.1|	-	0.022	13.2	0.8	0.031	12.7	0.5	1.1	1	0	0	1	1	1	0	AlwI	restriction	endonuclease
Nit_Regul_Hom	PF10126.4	gi|332797769|ref|YP_004459269.1|	-	0.072	12.8	0.0	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein,	homolog	of	nitrogen	regulatory	protein	PII
PIN	PF01850.16	gi|332797771|ref|YP_004459271.1|	-	9e-09	35.7	0.8	1.1e-08	35.3	0.6	1.1	1	0	0	1	1	1	1	PIN	domain
Gemini_V1	PF01524.12	gi|332797771|ref|YP_004459271.1|	-	0.19	11.7	0.9	23	5.0	0.2	2.5	2	1	0	2	2	2	0	Geminivirus	V1	protein
Ribosomal_L22e	PF01776.12	gi|332797771|ref|YP_004459271.1|	-	0.38	10.7	4.3	0.17	11.9	0.9	1.9	1	1	0	2	2	2	0	Ribosomal	L22e	protein	family
KaiC	PF06745.8	gi|332797772|ref|YP_004459272.1|	-	5.8e-55	185.8	0.2	6.9e-55	185.6	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|332797772|ref|YP_004459272.1|	-	8.9e-10	38.2	0.0	1.5e-09	37.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|332797772|ref|YP_004459272.1|	-	9.2e-07	27.5	0.7	9.5e-06	24.1	0.4	2.4	1	1	1	2	2	2	1	GvpD	gas	vesicle	protein
IstB_IS21	PF01695.12	gi|332797772|ref|YP_004459272.1|	-	0.00015	21.2	0.0	0.00037	19.9	0.0	1.6	1	1	1	2	2	2	1	IstB-like	ATP	binding	protein
MEDS	PF14417.1	gi|332797772|ref|YP_004459272.1|	-	0.00044	19.3	0.0	0.00078	18.5	0.0	1.4	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
RecA	PF00154.16	gi|332797772|ref|YP_004459272.1|	-	0.0011	18.1	0.0	0.002	17.2	0.0	1.5	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.6	gi|332797772|ref|YP_004459272.1|	-	0.0093	14.8	0.0	0.016	14.1	0.0	1.5	1	1	0	1	1	1	1	Rad51
DnaB_C	PF03796.10	gi|332797772|ref|YP_004459272.1|	-	0.016	14.0	0.0	0.038	12.8	0.0	1.7	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
RNA_helicase	PF00910.17	gi|332797772|ref|YP_004459272.1|	-	0.024	14.8	0.0	0.065	13.4	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
PAXNEB	PF05625.6	gi|332797772|ref|YP_004459272.1|	-	0.026	13.3	0.1	0.066	12.0	0.1	1.6	1	1	1	2	2	2	0	PAXNEB	protein
DUF2075	PF09848.4	gi|332797772|ref|YP_004459272.1|	-	0.036	13.0	0.0	0.072	12.0	0.0	1.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|332797772|ref|YP_004459272.1|	-	0.042	13.7	0.8	0.36	10.7	0.0	2.5	2	1	1	3	3	3	0	AAA	domain
DSPc	PF00782.15	gi|332797773|ref|YP_004459273.1|	-	1.6e-12	47.1	0.0	2.1e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
Y_phosphatase	PF00102.22	gi|332797773|ref|YP_004459273.1|	-	3.3e-09	36.4	0.0	5.5e-09	35.7	0.0	1.3	1	1	0	1	1	1	1	Protein-tyrosine	phosphatase
CDKN3	PF05706.7	gi|332797773|ref|YP_004459273.1|	-	1.3e-06	27.9	0.0	1.7e-06	27.5	0.0	1.2	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
PTPlike_phytase	PF14566.1	gi|332797773|ref|YP_004459273.1|	-	0.00034	20.6	0.0	0.00053	20.0	0.0	1.4	1	0	0	1	1	1	1	Inositol	hexakisphosphate
Y_phosphatase3	PF13350.1	gi|332797773|ref|YP_004459273.1|	-	0.057	13.6	0.0	0.35	11.0	0.0	1.9	1	1	1	2	2	2	0	Tyrosine	phosphatase	family
Endonuclease_5	PF04493.9	gi|332797774|ref|YP_004459274.1|	-	5.4e-43	146.7	0.3	7.1e-43	146.3	0.2	1.1	1	0	0	1	1	1	1	Endonuclease	V
Isochorismatase	PF00857.15	gi|332797775|ref|YP_004459275.1|	-	2.7e-43	147.9	0.0	3.3e-43	147.6	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
DHH	PF01368.15	gi|332797776|ref|YP_004459276.1|	-	3.2e-06	26.8	0.1	5.5e-06	26.0	0.1	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|332797776|ref|YP_004459276.1|	-	7.3e-06	25.6	0.1	1.9e-05	24.2	0.1	1.6	1	0	0	1	1	1	1	DHHA1	domain
Glyco_transf_4	PF13439.1	gi|332797776|ref|YP_004459276.1|	-	0.051	13.2	0.1	0.35	10.5	0.0	2.1	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
DUF4516	PF14990.1	gi|332797776|ref|YP_004459276.1|	-	0.068	12.7	0.0	0.17	11.4	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4516)
CoA_binding_2	PF13380.1	gi|332797776|ref|YP_004459276.1|	-	0.073	13.2	0.0	1.1	9.4	0.0	2.3	2	1	1	3	3	3	0	CoA	binding	domain
AhpC-TSA	PF00578.16	gi|332797777|ref|YP_004459277.1|	-	6.3e-33	113.1	0.0	8.6e-33	112.6	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|332797777|ref|YP_004459277.1|	-	2.3e-12	46.6	0.0	3.1e-12	46.2	0.0	1.2	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|332797777|ref|YP_004459277.1|	-	2.7e-10	39.7	0.2	6.1e-10	38.5	0.1	1.6	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
AhpC-TSA_2	PF13911.1	gi|332797777|ref|YP_004459277.1|	-	0.004	17.0	0.0	0.016	15.1	0.0	2.0	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
Metallophos_2	PF12850.2	gi|332797778|ref|YP_004459278.1|	-	8e-13	48.5	0.0	1e-12	48.1	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|332797778|ref|YP_004459278.1|	-	3e-08	33.3	0.0	4e-08	32.8	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
DUF763	PF05559.6	gi|332797779|ref|YP_004459279.1|	-	1e-126	422.2	0.0	1.2e-126	422.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
Citrate_synt	PF00285.16	gi|332797780|ref|YP_004459280.1|	-	2.1e-141	470.7	0.0	2.4e-141	470.6	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
Fe-ADH	PF00465.14	gi|332797780|ref|YP_004459280.1|	-	0.077	11.6	0.2	0.23	10.0	0.0	1.8	2	0	0	2	2	2	0	Iron-containing	alcohol	dehydrogenase
PhoU_div	PF01865.11	gi|332797781|ref|YP_004459281.1|	-	6.3e-15	54.9	8.5	7.4e-15	54.6	5.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PHO4	PF01384.15	gi|332797782|ref|YP_004459282.1|	-	1.1e-37	129.4	34.1	3e-37	128.0	19.3	1.5	1	1	1	2	2	2	2	Phosphate	transporter	family
RHH_1	PF01402.16	gi|332797783|ref|YP_004459283.1|	-	4.2e-09	35.9	0.3	6.1e-09	35.4	0.2	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
HMA	PF00403.21	gi|332797783|ref|YP_004459283.1|	-	0.018	15.1	0.5	0.025	14.7	0.4	1.2	1	0	0	1	1	1	0	Heavy-metal-associated	domain
PG_binding_2	PF08823.6	gi|332797783|ref|YP_004459283.1|	-	0.13	12.4	0.1	0.18	11.8	0.1	1.3	1	1	0	1	1	1	0	Putative	peptidoglycan	binding	domain
DEAD	PF00270.24	gi|332797784|ref|YP_004459284.1|	-	4e-30	104.5	0.0	3.5e-29	101.4	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332797784|ref|YP_004459284.1|	-	5.1e-11	42.2	0.0	1.2e-10	41.1	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|332797784|ref|YP_004459284.1|	-	1.8e-10	40.9	0.0	5.1e-10	39.4	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HHH_5	PF14520.1	gi|332797784|ref|YP_004459284.1|	-	1.8e-06	27.9	0.4	1.6e-05	24.9	0.3	2.6	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_19	PF13245.1	gi|332797784|ref|YP_004459284.1|	-	0.0015	18.1	1.8	0.043	13.5	0.1	2.7	3	0	0	3	3	3	1	Part	of	AAA	domain
KaiC	PF06745.8	gi|332797784|ref|YP_004459284.1|	-	0.0022	17.1	0.0	0.0068	15.5	0.0	1.8	1	0	0	1	1	1	1	KaiC
DNA_pol_lambd_f	PF10391.4	gi|332797784|ref|YP_004459284.1|	-	0.0027	17.1	0.1	0.013	15.0	0.0	2.3	3	0	0	3	3	3	1	Fingers	domain	of	DNA	polymerase	lambda
SNF2_N	PF00176.18	gi|332797784|ref|YP_004459284.1|	-	0.0052	15.6	0.0	0.0093	14.7	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
Carboxyl_trans	PF01039.17	gi|332797786|ref|YP_004459286.1|	-	1.7e-195	650.1	2.8	1.9e-195	649.9	1.9	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|332797786|ref|YP_004459286.1|	-	0.0003	20.0	0.6	0.00077	18.7	0.1	1.9	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
Biotin_lipoyl_2	PF13533.1	gi|332797787|ref|YP_004459287.1|	-	4.3e-20	71.1	8.5	4.9e-10	38.9	1.5	3.0	2	1	1	3	3	3	2	Biotin-lipoyl	like
Biotin_lipoyl	PF00364.17	gi|332797787|ref|YP_004459287.1|	-	4.8e-20	70.9	6.4	1.9e-19	69.0	2.1	3.0	4	0	0	4	4	4	1	Biotin-requiring	enzyme
HlyD	PF00529.15	gi|332797787|ref|YP_004459287.1|	-	6.4e-13	48.6	4.5	3.5e-06	26.5	0.1	2.4	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|332797787|ref|YP_004459287.1|	-	3.6e-09	36.2	4.7	0.00028	20.1	0.2	2.6	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|332797787|ref|YP_004459287.1|	-	2e-08	34.5	3.5	0.0015	18.8	0.0	2.9	2	2	1	3	3	3	2	HlyD	family	secretion	protein
NQRA	PF05896.6	gi|332797787|ref|YP_004459287.1|	-	8.1e-05	21.9	1.1	0.00036	19.8	0.7	1.9	1	1	0	1	1	1	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
RnfC_N	PF13375.1	gi|332797787|ref|YP_004459287.1|	-	0.00015	21.4	2.7	0.00067	19.3	1.7	2.0	1	1	1	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
PYNP_C	PF07831.8	gi|332797787|ref|YP_004459287.1|	-	0.00059	19.2	1.6	0.25	10.8	0.0	2.6	1	1	1	2	2	2	2	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
GCV_H	PF01597.14	gi|332797787|ref|YP_004459287.1|	-	0.0006	19.4	1.3	0.0011	18.6	0.3	1.9	2	1	0	2	2	2	1	Glycine	cleavage	H-protein
PTS_EIIA_1	PF00358.15	gi|332797787|ref|YP_004459287.1|	-	0.00089	18.8	2.0	0.1	12.1	0.1	3.5	1	1	2	3	3	3	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
DUF2118	PF09891.4	gi|332797787|ref|YP_004459287.1|	-	0.0021	17.7	4.3	0.041	13.5	0.1	3.0	1	1	2	3	3	3	2	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
QRPTase_N	PF02749.11	gi|332797787|ref|YP_004459287.1|	-	0.0085	15.8	0.4	1.4	8.7	0.0	3.3	2	1	2	4	4	4	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Peptidase_M23	PF01551.17	gi|332797787|ref|YP_004459287.1|	-	0.03	14.3	2.0	0.79	9.8	1.4	2.8	1	1	0	1	1	1	0	Peptidase	family	M23
NdhO	PF11910.3	gi|332797787|ref|YP_004459287.1|	-	0.12	12.0	0.3	0.35	10.5	0.0	1.9	2	1	0	2	2	2	0	Cyanobacterial	and	plant	NDH-1	subunit	O
Apocytochr_F_C	PF01333.14	gi|332797787|ref|YP_004459287.1|	-	0.15	11.8	3.0	0.38	10.6	0.5	2.5	1	1	1	2	2	2	0	Apocytochrome	F,	C-terminal
PASTA	PF03793.14	gi|332797787|ref|YP_004459287.1|	-	0.33	10.6	2.3	2.1	8.0	0.0	2.4	2	0	0	2	2	2	0	PASTA	domain
CPSase_L_D2	PF02786.12	gi|332797788|ref|YP_004459288.1|	-	2.3e-60	203.4	0.0	3.5e-60	202.8	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_chain	PF00289.17	gi|332797788|ref|YP_004459288.1|	-	3.6e-43	146.1	0.2	6.6e-43	145.3	0.1	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Biotin_carb_C	PF02785.14	gi|332797788|ref|YP_004459288.1|	-	6.5e-35	119.3	0.0	1.2e-34	118.4	0.0	1.5	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
ATPgrasp_Ter	PF15632.1	gi|332797788|ref|YP_004459288.1|	-	8.6e-12	44.4	0.0	3.7e-11	42.3	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.1	gi|332797788|ref|YP_004459288.1|	-	4.2e-10	39.6	0.0	9.8e-10	38.4	0.0	1.6	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|332797788|ref|YP_004459288.1|	-	4.5e-06	26.1	0.0	1e-05	25.0	0.0	1.6	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.17	gi|332797788|ref|YP_004459288.1|	-	7.7e-05	22.1	0.1	0.0003	20.1	0.0	1.9	2	0	0	2	2	2	1	ATP-grasp	domain
RimK	PF08443.6	gi|332797788|ref|YP_004459288.1|	-	0.00058	19.3	0.0	0.0011	18.4	0.0	1.6	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|332797788|ref|YP_004459288.1|	-	0.0096	15.1	0.0	0.11	11.7	0.0	2.3	2	0	0	2	2	2	1	ATP-grasp	domain
Oxidored_nitro	PF00148.14	gi|332797788|ref|YP_004459288.1|	-	0.043	12.4	0.1	0.068	11.7	0.1	1.3	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
USP8_dimer	PF08969.6	gi|332797788|ref|YP_004459288.1|	-	0.78	9.7	3.2	0.71	9.8	0.1	2.4	3	0	0	3	3	3	0	USP8	dimerisation	domain
BPD_transp_1	PF00528.17	gi|332797789|ref|YP_004459289.1|	-	5.7e-23	81.3	40.9	2.5e-14	53.2	9.6	2.9	2	1	0	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
Ycf4	PF02392.11	gi|332797789|ref|YP_004459289.1|	-	9	5.5	13.8	0.03	13.6	2.3	2.1	3	0	0	3	3	3	0	Ycf4
ABC_tran	PF00005.22	gi|332797790|ref|YP_004459290.1|	-	3.5e-28	98.6	0.0	5.5e-28	97.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797790|ref|YP_004459290.1|	-	3.5e-11	43.6	0.3	4.5e-05	23.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|332797790|ref|YP_004459290.1|	-	5.7e-05	22.3	0.9	0.031	13.3	0.1	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
DUF258	PF03193.11	gi|332797790|ref|YP_004459290.1|	-	0.0002	20.5	0.0	0.00038	19.6	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|332797790|ref|YP_004459290.1|	-	0.00048	19.4	0.1	0.73	9.0	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|332797790|ref|YP_004459290.1|	-	0.00078	19.8	0.5	0.0018	18.6	0.2	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|332797790|ref|YP_004459290.1|	-	0.00091	19.2	0.1	0.0024	17.8	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797790|ref|YP_004459290.1|	-	0.0051	16.9	0.1	0.019	15.1	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|332797790|ref|YP_004459290.1|	-	0.0075	15.7	0.0	0.018	14.5	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|332797790|ref|YP_004459290.1|	-	0.011	16.5	4.7	0.012	16.4	0.6	2.4	2	2	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|332797790|ref|YP_004459290.1|	-	0.013	15.7	0.1	0.085	13.0	0.0	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|332797790|ref|YP_004459290.1|	-	0.019	15.3	0.1	0.05	13.9	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
AAA_10	PF12846.2	gi|332797790|ref|YP_004459290.1|	-	0.035	13.5	0.2	0.19	11.1	0.1	2.0	2	0	0	2	2	2	0	AAA-like	domain
MobB	PF03205.9	gi|332797790|ref|YP_004459290.1|	-	0.043	13.5	0.0	0.083	12.5	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_28	PF13521.1	gi|332797790|ref|YP_004459290.1|	-	0.076	12.9	0.1	0.23	11.4	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|332797790|ref|YP_004459290.1|	-	0.091	12.4	0.2	0.21	11.2	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_24	PF13479.1	gi|332797790|ref|YP_004459290.1|	-	0.11	12.0	0.0	0.19	11.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|332797790|ref|YP_004459290.1|	-	0.12	10.8	0.1	3.3	6.2	0.0	2.4	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
MMR_HSR1	PF01926.18	gi|332797790|ref|YP_004459290.1|	-	0.15	12.0	0.2	0.24	11.3	0.1	1.5	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
4HBT	PF03061.17	gi|332797791|ref|YP_004459291.1|	-	9.6e-06	25.6	0.0	1.3e-05	25.2	0.0	1.1	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|332797791|ref|YP_004459291.1|	-	0.034	14.5	0.0	0.041	14.3	0.0	1.2	1	0	0	1	1	1	0	Thioesterase-like	superfamily
TLP-20	PF06088.6	gi|332797791|ref|YP_004459291.1|	-	0.069	12.8	0.2	0.76	9.4	0.1	2.0	2	0	0	2	2	2	0	Nucleopolyhedrovirus	telokin-like	protein-20	(TLP20)
Myosin_N	PF02736.14	gi|332797791|ref|YP_004459291.1|	-	0.83	9.3	4.3	0.72	9.5	0.3	2.4	3	0	0	3	3	3	0	Myosin	N-terminal	SH3-like	domain
DEAD	PF00270.24	gi|332797792|ref|YP_004459292.1|	-	1e-14	54.3	0.0	1.6e-10	40.7	0.0	2.4	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|332797792|ref|YP_004459292.1|	-	2.1e-13	49.9	0.0	4.5e-13	48.8	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HEM4	PF02602.10	gi|332797792|ref|YP_004459292.1|	-	0.02	14.1	0.0	0.043	13.0	0.0	1.5	1	0	0	1	1	1	0	Uroporphyrinogen-III	synthase	HemD
HemN_C	PF06969.11	gi|332797792|ref|YP_004459292.1|	-	0.037	14.0	0.3	0.14	12.2	0.0	2.2	2	0	0	2	2	2	0	HemN	C-terminal	domain
ResIII	PF04851.10	gi|332797792|ref|YP_004459292.1|	-	0.044	13.6	0.1	0.12	12.1	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|332797792|ref|YP_004459292.1|	-	0.07	13.2	0.1	0.22	11.6	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
DrsE	PF02635.10	gi|332797793|ref|YP_004459293.1|	-	2.7e-18	66.1	0.2	2.9e-18	66.0	0.2	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
E1-E2_ATPase	PF00122.15	gi|332797794|ref|YP_004459294.1|	-	2.2e-66	223.1	6.2	2.2e-66	223.1	4.3	2.6	2	1	0	2	2	2	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|332797794|ref|YP_004459294.1|	-	4.5e-29	102.4	0.0	8e-29	101.5	0.0	1.5	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_N	PF00690.21	gi|332797794|ref|YP_004459294.1|	-	2.1e-17	62.3	0.0	5.9e-17	60.8	0.0	1.9	1	0	0	1	1	1	1	Cation	transporter/ATPase,	N-terminus
HAD	PF12710.2	gi|332797794|ref|YP_004459294.1|	-	2.1e-17	63.9	0.0	4.6e-17	62.8	0.0	1.6	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|332797794|ref|YP_004459294.1|	-	6.9e-06	25.8	0.5	1.9e-05	24.3	0.1	2.0	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like2	PF13246.1	gi|332797794|ref|YP_004459294.1|	-	0.0014	18.5	0.0	0.0066	16.3	0.0	2.1	2	0	0	2	2	2	1	Putative	hydrolase	of	sodium-potassium	ATPase	alpha	subunit
TPR_12	PF13424.1	gi|332797795|ref|YP_004459295.1|	-	4.4e-14	52.1	12.9	1.4e-06	28.1	0.1	5.8	4	2	1	5	5	5	3	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|332797795|ref|YP_004459295.1|	-	2.6e-11	43.4	16.6	1.6e-09	37.8	0.2	4.8	3	2	2	5	5	5	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|332797795|ref|YP_004459295.1|	-	5e-08	33.1	12.5	0.011	16.0	0.3	6.2	2	2	5	7	7	7	3	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|332797795|ref|YP_004459295.1|	-	1.1e-06	28.1	12.7	1.7e-06	27.5	0.5	4.7	2	1	4	6	6	6	1	TPR	repeat
TPR_14	PF13428.1	gi|332797795|ref|YP_004459295.1|	-	7.3e-06	26.1	3.6	0.16	12.6	0.0	5.6	3	2	3	6	6	6	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|332797795|ref|YP_004459295.1|	-	2.1e-05	25.0	7.6	0.00016	22.2	0.1	4.0	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|332797795|ref|YP_004459295.1|	-	0.00014	22.1	3.6	11	6.7	0.0	6.0	6	0	0	6	6	5	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|332797795|ref|YP_004459295.1|	-	0.00014	21.3	27.6	0.024	14.3	0.2	7.6	7	1	1	8	8	8	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|332797795|ref|YP_004459295.1|	-	0.00032	20.3	17.1	0.0036	17.0	0.1	6.7	8	1	0	8	8	8	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|332797795|ref|YP_004459295.1|	-	0.00036	20.4	5.3	0.79	10.0	0.0	5.2	6	1	0	6	6	5	2	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|332797795|ref|YP_004459295.1|	-	0.00052	19.1	7.4	0.27	10.2	0.0	3.2	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|332797795|ref|YP_004459295.1|	-	0.0037	16.9	7.6	0.087	12.6	0.0	5.6	5	2	1	6	6	6	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|332797795|ref|YP_004459295.1|	-	0.011	15.2	0.3	0.011	15.2	0.2	6.3	7	0	0	7	7	7	0	Tetratricopeptide	repeat
Apc5	PF12862.2	gi|332797795|ref|YP_004459295.1|	-	0.018	14.8	0.2	9.5	6.1	0.0	3.4	4	0	0	4	4	4	0	Anaphase-promoting	complex	subunit	5
TPR_3	PF07720.7	gi|332797795|ref|YP_004459295.1|	-	0.039	13.7	1.8	1.5	8.6	0.1	3.5	4	0	0	4	4	3	0	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|332797795|ref|YP_004459295.1|	-	0.13	12.2	0.1	0.13	12.2	0.1	2.2	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Lipoprotein_17	PF04200.7	gi|332797795|ref|YP_004459295.1|	-	0.28	11.3	2.1	0.31	11.2	0.1	2.1	2	0	0	2	2	2	0	Lipoprotein	associated	domain
TPR_20	PF14561.1	gi|332797795|ref|YP_004459295.1|	-	0.45	10.6	5.2	0.61	10.2	0.2	3.2	3	1	0	3	3	3	0	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|332797795|ref|YP_004459295.1|	-	5.2	7.1	6.6	19	5.3	0.1	4.4	5	0	0	5	5	5	0	Tetratricopeptide	repeat
dUTPase	PF00692.14	gi|332797796|ref|YP_004459296.1|	-	5.9e-14	51.6	0.0	1.1e-13	50.7	0.0	1.5	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|332797796|ref|YP_004459296.1|	-	0.015	13.6	0.0	0.036	12.4	0.0	1.7	1	1	0	1	1	1	0	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
DUF4396	PF14342.1	gi|332797797|ref|YP_004459297.1|	-	6.8	6.8	10.3	1.3	9.1	1.7	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4396)
Esterase	PF00756.15	gi|332797798|ref|YP_004459298.1|	-	2.8e-15	56.4	0.0	1.4e-08	34.4	0.0	2.0	2	0	0	2	2	2	2	Putative	esterase
Abhydrolase_5	PF12695.2	gi|332797798|ref|YP_004459298.1|	-	0.0067	16.1	0.0	0.0095	15.7	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF915	PF06028.6	gi|332797798|ref|YP_004459298.1|	-	0.027	13.5	0.0	0.073	12.1	0.0	1.6	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
Chlorophyllase	PF07224.6	gi|332797798|ref|YP_004459298.1|	-	0.12	11.1	0.0	0.16	10.7	0.0	1.2	1	0	0	1	1	1	0	Chlorophyllase
RHH_1	PF01402.16	gi|332797800|ref|YP_004459300.1|	-	0.027	14.3	0.7	1.8	8.5	0.5	2.1	1	1	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
7TMR-DISM_7TM	PF07695.6	gi|332797802|ref|YP_004459302.1|	-	0.056	13.0	13.3	0.027	14.1	7.7	1.4	1	1	0	1	1	1	0	7TM	diverse	intracellular	signalling
DctQ	PF04290.7	gi|332797804|ref|YP_004459304.1|	-	0.28	10.9	2.2	2.6	7.8	1.5	1.9	1	1	0	1	1	1	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
CotE	PF10628.4	gi|332797805|ref|YP_004459305.1|	-	0.043	13.1	1.2	0.073	12.4	0.8	1.2	1	0	0	1	1	1	0	Outer	spore	coat	protein	E	(CotE)
Phage_integrase	PF00589.17	gi|332797806|ref|YP_004459306.1|	-	0.002	17.8	0.1	2.1	7.9	0.0	2.3	2	0	0	2	2	2	2	Phage	integrase	family
Mlp	PF03304.8	gi|332797806|ref|YP_004459306.1|	-	0.024	14.6	2.4	0.045	13.7	1.7	1.4	1	0	0	1	1	1	0	Mlp	lipoprotein	family
Phage_int_SAM_4	PF13495.1	gi|332797806|ref|YP_004459306.1|	-	0.037	14.3	0.1	0.32	11.3	0.0	2.3	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
zf-C2H2_6	PF13912.1	gi|332797807|ref|YP_004459307.1|	-	1.2e-09	37.6	0.7	0.00065	19.5	0.3	2.2	2	0	0	2	2	2	2	C2H2-type	zinc	finger
zf-C2H2	PF00096.21	gi|332797807|ref|YP_004459307.1|	-	1.7e-08	34.2	1.7	0.00025	21.2	0.4	2.3	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-C2H2_4	PF13894.1	gi|332797807|ref|YP_004459307.1|	-	2e-07	30.8	0.9	0.0037	17.4	0.0	2.3	2	0	0	2	2	2	2	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|332797807|ref|YP_004459307.1|	-	4.9e-06	26.5	0.5	0.0085	16.2	0.1	2.2	1	1	1	2	2	2	2	Drought	induced	19	protein	(Di19),	zinc-binding
DUF629	PF04780.7	gi|332797807|ref|YP_004459307.1|	-	0.00023	19.8	0.3	0.23	9.9	0.0	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF629)
zf-C2H2_2	PF12756.2	gi|332797807|ref|YP_004459307.1|	-	0.00054	20.0	0.1	0.21	11.6	0.1	2.2	1	1	1	2	2	2	2	C2H2	type	zinc-finger	(2	copies)
zf-BED	PF02892.10	gi|332797807|ref|YP_004459307.1|	-	0.0016	18.1	3.2	0.0031	17.2	0.6	2.2	1	1	1	2	2	2	1	BED	zinc	finger
FYVE	PF01363.16	gi|332797807|ref|YP_004459307.1|	-	0.0061	16.4	0.1	0.0087	15.9	0.1	1.3	1	0	0	1	1	1	1	FYVE	zinc	finger
HNH	PF01844.18	gi|332797807|ref|YP_004459307.1|	-	0.012	15.5	0.5	0.28	11.0	0.1	2.2	2	0	0	2	2	2	0	HNH	endonuclease
zinc_ribbon_2	PF13240.1	gi|332797807|ref|YP_004459307.1|	-	0.022	14.2	1.3	0.065	12.7	0.1	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-met	PF12874.2	gi|332797807|ref|YP_004459307.1|	-	0.037	14.2	2.1	0.77	10.0	0.0	2.5	2	1	0	2	2	2	0	Zinc-finger	of	C2H2	type
Prok-RING_1	PF14446.1	gi|332797807|ref|YP_004459307.1|	-	0.053	13.2	1.0	0.65	9.7	0.2	2.1	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Prok-RING_4	PF14447.1	gi|332797807|ref|YP_004459307.1|	-	0.057	12.9	0.8	0.17	11.4	0.2	2.0	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	4
zf-ribbon_3	PF13248.1	gi|332797807|ref|YP_004459307.1|	-	0.087	12.0	0.9	1	8.6	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2256	PF10013.4	gi|332797807|ref|YP_004459307.1|	-	0.089	12.5	2.5	1.5	8.6	0.2	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zf-Sec23_Sec24	PF04810.10	gi|332797807|ref|YP_004459307.1|	-	0.11	12.0	1.0	0.34	10.5	0.0	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
PyrI_C	PF02748.10	gi|332797807|ref|YP_004459307.1|	-	0.12	11.7	1.8	0.24	10.8	1.2	1.5	1	1	0	1	1	1	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-C2HC_2	PF13913.1	gi|332797807|ref|YP_004459307.1|	-	0.16	11.7	1.8	0.53	10.0	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-CHCC	PF10276.4	gi|332797807|ref|YP_004459307.1|	-	0.25	11.2	0.4	0.25	11.2	0.3	1.8	2	0	0	2	2	2	0	Zinc-finger	domain
zf-H2C2_2	PF13465.1	gi|332797807|ref|YP_004459307.1|	-	0.28	11.5	6.6	0.45	10.8	0.5	2.8	3	0	0	3	3	3	0	Zinc-finger	double	domain
zf-C2H2_jaz	PF12171.3	gi|332797807|ref|YP_004459307.1|	-	0.51	10.5	3.5	0.97	9.6	0.6	2.5	2	1	0	2	2	2	0	Zinc-finger	double-stranded	RNA-binding
zf-FCS	PF06467.9	gi|332797807|ref|YP_004459307.1|	-	1.8	8.2	4.6	1.5	8.5	0.3	2.4	2	1	1	3	3	3	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-CCHC_4	PF14392.1	gi|332797807|ref|YP_004459307.1|	-	2.6	7.7	4.8	0.65	9.7	0.7	1.9	3	0	0	3	3	3	0	Zinc	knuckle
DUF815	PF05673.8	gi|332797808|ref|YP_004459308.1|	-	0.00019	20.4	0.1	0.00053	18.9	0.1	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
MCM	PF00493.18	gi|332797808|ref|YP_004459308.1|	-	0.0025	16.6	2.0	0.006	15.4	0.0	2.4	3	0	0	3	3	3	1	MCM2/3/5	family
MarR_2	PF12802.2	gi|332797808|ref|YP_004459308.1|	-	0.0091	15.6	0.0	0.037	13.7	0.0	2.1	2	0	0	2	2	1	1	MarR	family
AAA	PF00004.24	gi|332797808|ref|YP_004459308.1|	-	0.012	15.7	1.9	0.023	14.9	0.1	2.4	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|332797808|ref|YP_004459308.1|	-	0.017	14.8	0.2	0.081	12.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|332797808|ref|YP_004459308.1|	-	0.019	15.0	0.1	0.063	13.4	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
HTH_24	PF13412.1	gi|332797808|ref|YP_004459308.1|	-	0.022	14.1	3.8	1.3	8.5	0.0	3.9	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|332797808|ref|YP_004459308.1|	-	0.04	13.6	0.4	0.7	9.6	0.1	3.0	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
AAA_29	PF13555.1	gi|332797808|ref|YP_004459308.1|	-	0.043	13.3	0.1	0.1	12.1	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|332797808|ref|YP_004459308.1|	-	0.043	14.1	0.0	0.043	14.1	0.0	2.5	2	1	0	2	2	1	0	ABC	transporter
DUF258	PF03193.11	gi|332797808|ref|YP_004459308.1|	-	0.056	12.6	0.1	0.12	11.5	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|332797808|ref|YP_004459308.1|	-	0.072	13.0	0.1	0.24	11.3	0.1	1.9	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF87	PF01935.12	gi|332797808|ref|YP_004459308.1|	-	0.1	12.3	12.1	0.12	12.1	0.0	3.6	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
FeoC	PF09012.5	gi|332797808|ref|YP_004459308.1|	-	0.11	12.2	0.0	0.37	10.5	0.0	1.9	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|332797808|ref|YP_004459308.1|	-	0.14	11.8	2.8	1.5	8.5	0.1	3.2	3	0	0	3	3	3	0	MarR	family
AAA_18	PF13238.1	gi|332797808|ref|YP_004459308.1|	-	2.7	8.3	7.6	2.2	8.6	0.0	3.8	3	1	1	4	4	4	0	AAA	domain
SSV1_ORF_D-335	PF07935.6	gi|332797809|ref|YP_004459309.1|	-	1.4e-27	95.2	0.6	1.7e-27	94.9	0.4	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
eRF1_2	PF03464.10	gi|332797810|ref|YP_004459310.1|	-	1.2e-38	132.4	0.0	2e-38	131.7	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|332797810|ref|YP_004459310.1|	-	2.7e-19	69.4	3.3	4.9e-18	65.4	0.9	2.8	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|332797810|ref|YP_004459310.1|	-	4.7e-18	65.0	0.0	9.5e-18	64.0	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	1
Pribosyltran	PF00156.22	gi|332797811|ref|YP_004459311.1|	-	7e-21	74.2	0.4	9.6e-21	73.7	0.3	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|332797811|ref|YP_004459311.1|	-	0.0067	15.6	0.0	0.0093	15.1	0.0	1.1	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PNP_UDP_1	PF01048.15	gi|332797812|ref|YP_004459312.1|	-	2.6e-48	164.0	0.0	2.9e-48	163.8	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
polyprenyl_synt	PF00348.12	gi|332797814|ref|YP_004459314.1|	-	1.7e-35	122.1	0.1	2.4e-35	121.6	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
RimK	PF08443.6	gi|332797815|ref|YP_004459315.1|	-	6.1e-40	136.7	0.0	7.2e-40	136.4	0.0	1.0	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|332797815|ref|YP_004459315.1|	-	2.1e-14	53.6	0.0	2.8e-14	53.2	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|332797815|ref|YP_004459315.1|	-	1.2e-11	44.0	0.0	1.5e-11	43.7	0.0	1.1	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|332797815|ref|YP_004459315.1|	-	2.2e-10	39.8	0.0	1e-09	37.6	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|332797815|ref|YP_004459315.1|	-	6.1e-07	29.4	0.2	1.2e-06	28.4	0.1	1.5	1	1	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_YheCD	PF14398.1	gi|332797815|ref|YP_004459315.1|	-	3.4e-06	26.0	0.0	0.018	13.8	0.0	2.3	2	1	0	2	2	2	2	YheC/D	like	ATP-grasp
DUF4343	PF14243.1	gi|332797815|ref|YP_004459315.1|	-	0.034	13.9	0.0	0.064	13.1	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4343)
ATP-grasp	PF02222.17	gi|332797815|ref|YP_004459315.1|	-	0.036	13.4	0.0	0.048	13.0	0.0	1.1	1	0	0	1	1	1	0	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|332797815|ref|YP_004459315.1|	-	0.072	12.4	0.0	0.17	11.2	0.0	1.8	1	1	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
RIO1	PF01163.17	gi|332797815|ref|YP_004459315.1|	-	0.081	12.2	0.1	0.14	11.4	0.1	1.4	1	0	0	1	1	1	0	RIO1	family
Synapsin_C	PF02750.9	gi|332797815|ref|YP_004459315.1|	-	0.099	11.7	0.0	0.12	11.4	0.0	1.1	1	0	0	1	1	1	0	Synapsin,	ATP	binding	domain
HTH_AsnC-type	PF13404.1	gi|332797816|ref|YP_004459316.1|	-	9.2e-18	63.5	1.6	1.6e-17	62.7	1.1	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|332797816|ref|YP_004459316.1|	-	1e-17	63.6	0.2	1.5e-17	63.0	0.2	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|332797816|ref|YP_004459316.1|	-	4.4e-17	61.1	1.4	9.9e-17	60.0	0.9	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|332797816|ref|YP_004459316.1|	-	4.9e-10	38.9	0.7	1e-09	37.8	0.1	1.8	2	0	0	2	2	2	1	HTH	domain
MarR_2	PF12802.2	gi|332797816|ref|YP_004459316.1|	-	5.2e-05	22.8	0.0	0.00012	21.7	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|332797816|ref|YP_004459316.1|	-	6.2e-05	22.5	0.2	0.00013	21.5	0.0	1.7	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|332797816|ref|YP_004459316.1|	-	8e-05	22.3	0.0	0.00018	21.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|332797816|ref|YP_004459316.1|	-	0.00017	21.2	0.0	0.00036	20.2	0.0	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
ACT_4	PF13291.1	gi|332797816|ref|YP_004459316.1|	-	0.00018	21.7	0.0	0.011	16.1	0.0	2.4	2	0	0	2	2	2	1	ACT	domain
HTH_34	PF13601.1	gi|332797816|ref|YP_004459316.1|	-	0.00021	21.2	0.0	0.00039	20.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|332797816|ref|YP_004459316.1|	-	0.00099	18.7	0.1	0.0038	16.9	0.1	1.9	2	0	0	2	2	1	1	MarR	family
HTH_27	PF13463.1	gi|332797816|ref|YP_004459316.1|	-	0.0014	18.9	0.1	0.004	17.4	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_1	PF00126.22	gi|332797816|ref|YP_004459316.1|	-	0.0026	17.4	0.1	0.0042	16.7	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_23	PF13384.1	gi|332797816|ref|YP_004459316.1|	-	0.003	17.1	0.3	0.01	15.4	0.1	1.9	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_Tnp_ISL3	PF13542.1	gi|332797816|ref|YP_004459316.1|	-	0.0039	16.3	0.1	0.0064	15.6	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_DeoR	PF08220.7	gi|332797816|ref|YP_004459316.1|	-	0.0043	16.5	0.3	0.015	14.7	0.1	1.9	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|332797816|ref|YP_004459316.1|	-	0.0091	15.9	0.0	0.023	14.6	0.0	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
NapD	PF03927.8	gi|332797816|ref|YP_004459316.1|	-	0.011	15.6	0.0	0.02	14.6	0.0	1.4	1	0	0	1	1	1	0	NapD	protein
Sigma70_r4	PF04545.11	gi|332797816|ref|YP_004459316.1|	-	0.011	15.0	0.1	0.039	13.2	0.1	2.0	1	0	0	1	1	1	0	Sigma-70,	region	4
PCI	PF01399.22	gi|332797816|ref|YP_004459316.1|	-	0.011	16.0	0.2	0.028	14.7	0.0	1.7	2	1	0	2	2	2	0	PCI	domain
DUF2042	PF09743.4	gi|332797816|ref|YP_004459316.1|	-	0.011	15.0	0.1	0.022	14.0	0.0	1.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2042)
HTH_36	PF13730.1	gi|332797816|ref|YP_004459316.1|	-	0.014	15.5	0.0	0.024	14.7	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|332797816|ref|YP_004459316.1|	-	0.019	14.5	0.3	0.033	13.7	0.2	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_8	PF02954.14	gi|332797816|ref|YP_004459316.1|	-	0.02	14.4	0.0	0.036	13.6	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
TrmB	PF01978.14	gi|332797816|ref|YP_004459316.1|	-	0.044	13.4	1.5	0.78	9.4	0.0	2.8	2	1	1	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|332797816|ref|YP_004459316.1|	-	0.044	13.3	0.0	0.077	12.5	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Rrf2	PF02082.15	gi|332797816|ref|YP_004459316.1|	-	0.049	13.7	0.1	0.14	12.3	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_10	PF04967.7	gi|332797816|ref|YP_004459316.1|	-	0.055	13.0	0.1	0.29	10.7	0.1	2.2	2	0	0	2	2	2	0	HTH	DNA	binding	domain
Mga	PF05043.8	gi|332797816|ref|YP_004459316.1|	-	0.059	13.6	0.5	0.14	12.4	0.1	1.7	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_psq	PF05225.11	gi|332797816|ref|YP_004459316.1|	-	0.071	12.6	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_30	PF13556.1	gi|332797816|ref|YP_004459316.1|	-	0.11	12.1	0.0	0.31	10.6	0.0	1.7	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_Tnp_Tc3_2	PF01498.13	gi|332797816|ref|YP_004459316.1|	-	0.11	12.5	0.3	0.2	11.7	0.2	1.4	1	0	0	1	1	1	0	Transposase
FeoC	PF09012.5	gi|332797816|ref|YP_004459316.1|	-	0.11	12.1	0.1	0.2	11.3	0.1	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_29	PF13551.1	gi|332797816|ref|YP_004459316.1|	-	0.12	12.5	0.0	0.23	11.6	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
Pyr_redox_2	PF07992.9	gi|332797817|ref|YP_004459317.1|	-	1.5e-07	31.5	0.1	5.7e-07	29.6	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|332797817|ref|YP_004459317.1|	-	1e-05	24.6	0.1	0.016	14.1	0.2	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|332797817|ref|YP_004459317.1|	-	2.1e-05	24.4	0.1	4.3e-05	23.4	0.1	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|332797817|ref|YP_004459317.1|	-	0.011	14.7	0.2	0.016	14.3	0.1	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|332797817|ref|YP_004459317.1|	-	0.023	14.7	0.1	0.22	11.5	0.1	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|332797817|ref|YP_004459317.1|	-	0.03	13.4	0.1	0.26	10.3	0.1	2.3	3	0	0	3	3	3	0	Thi4	family
Lycopene_cycl	PF05834.7	gi|332797817|ref|YP_004459317.1|	-	0.037	12.9	0.0	0.17	10.7	0.0	1.9	2	0	0	2	2	2	0	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|332797817|ref|YP_004459317.1|	-	0.043	13.5	0.1	1.6	8.4	0.1	2.2	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Pyr_redox	PF00070.22	gi|332797817|ref|YP_004459317.1|	-	0.052	13.9	0.5	0.21	11.9	0.1	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|332797817|ref|YP_004459317.1|	-	0.077	11.4	0.0	0.4	9.0	0.0	1.9	2	0	0	2	2	2	0	HI0933-like	protein
Asparaginase_2	PF01112.13	gi|332797819|ref|YP_004459319.1|	-	6.7e-58	195.8	10.7	5.2e-36	123.9	4.3	2.0	1	1	1	2	2	2	2	Asparaginase
Metallophos_2	PF12850.2	gi|332797820|ref|YP_004459320.1|	-	1.7e-07	31.2	0.0	1.9e-07	31.0	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
RXT2_N	PF08595.6	gi|332797821|ref|YP_004459321.1|	-	0.12	12.2	0.1	0.17	11.6	0.1	1.4	1	1	0	1	1	1	0	RXT2-like,	N-terminal
Pox_I1	PF03289.8	gi|332797822|ref|YP_004459322.1|	-	0.00042	19.2	0.3	0.034	12.9	0.1	2.0	2	0	0	2	2	2	2	Poxvirus	protein	I1
Clathrin	PF00637.15	gi|332797822|ref|YP_004459322.1|	-	0.029	13.9	0.7	0.049	13.2	0.2	1.6	2	1	0	2	2	2	0	Region	in	Clathrin	and	VPS
FTH	PF01827.22	gi|332797822|ref|YP_004459322.1|	-	0.03	13.9	0.2	0.038	13.5	0.2	1.2	1	0	0	1	1	1	0	FTH	domain
DAO	PF01266.19	gi|332797823|ref|YP_004459323.1|	-	2.2e-15	56.4	0.0	2.2e-09	36.6	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|332797823|ref|YP_004459323.1|	-	3.9e-10	39.1	0.0	2.3e-05	23.4	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|332797823|ref|YP_004459323.1|	-	1e-09	37.9	0.2	5.9e-08	32.1	0.0	2.7	2	1	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|332797823|ref|YP_004459323.1|	-	4.9e-08	32.4	0.1	3.6e-07	29.6	0.1	2.1	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332797823|ref|YP_004459323.1|	-	1.5e-07	31.5	0.0	3.1e-07	30.4	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797823|ref|YP_004459323.1|	-	6e-07	28.6	0.0	2e-06	26.9	0.0	1.7	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332797823|ref|YP_004459323.1|	-	6.3e-07	29.3	0.0	2.1e-06	27.6	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|332797823|ref|YP_004459323.1|	-	1.4e-05	23.9	0.0	0.027	13.0	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox	PF00070.22	gi|332797823|ref|YP_004459323.1|	-	2.2e-05	24.7	0.0	0.00024	21.4	0.0	2.5	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|332797823|ref|YP_004459323.1|	-	3.3e-05	22.9	0.0	6.2e-05	22.0	0.0	1.5	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|332797823|ref|YP_004459323.1|	-	4.5e-05	22.6	0.0	0.00052	19.1	0.0	2.4	1	1	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.9	gi|332797823|ref|YP_004459323.1|	-	0.00041	18.9	0.0	0.00075	18.0	0.0	1.4	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|332797823|ref|YP_004459323.1|	-	0.0038	17.3	0.2	0.017	15.1	0.1	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|332797823|ref|YP_004459323.1|	-	0.013	15.1	0.0	0.029	14.0	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GDI	PF00996.13	gi|332797823|ref|YP_004459323.1|	-	0.023	13.0	0.0	0.039	12.2	0.0	1.4	1	0	0	1	1	1	0	GDP	dissociation	inhibitor
UDPG_MGDP_dh_N	PF03721.9	gi|332797823|ref|YP_004459323.1|	-	0.026	13.9	0.0	0.043	13.1	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|332797823|ref|YP_004459323.1|	-	0.031	14.0	0.1	0.087	12.5	0.0	1.8	2	0	0	2	2	2	0	FAD-NAD(P)-binding
NAD_binding_7	PF13241.1	gi|332797823|ref|YP_004459323.1|	-	0.034	14.4	0.0	0.096	12.9	0.0	1.9	1	0	0	1	1	1	0	Putative	NAD(P)-binding
SoxG	PF04268.7	gi|332797823|ref|YP_004459323.1|	-	0.15	11.8	0.0	0.27	11.1	0.0	1.3	1	0	0	1	1	1	0	Sarcosine	oxidase,	gamma	subunit	family
Shikimate_DH	PF01488.15	gi|332797823|ref|YP_004459323.1|	-	0.16	12.0	0.0	0.49	10.4	0.0	1.8	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
DUF2070	PF09843.4	gi|332797824|ref|YP_004459324.1|	-	1.3e-25	89.9	0.1	2.1e-25	89.2	0.1	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Hydrolase_6	PF13344.1	gi|332797826|ref|YP_004459326.1|	-	3.9e-25	87.6	0.0	1e-24	86.3	0.0	1.7	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|332797826|ref|YP_004459326.1|	-	7.4e-19	67.2	0.0	1.8e-18	65.9	0.0	1.7	2	0	0	2	2	2	1	HAD-hyrolase-like
HAD_2	PF13419.1	gi|332797826|ref|YP_004459326.1|	-	4e-07	30.4	0.0	0.0035	17.5	0.0	2.4	2	1	1	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|332797826|ref|YP_004459326.1|	-	1.3e-06	29.0	0.1	1e-05	26.0	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.5	gi|332797826|ref|YP_004459326.1|	-	0.00063	19.1	0.4	0.005	16.2	0.0	2.3	3	0	0	3	3	3	1	Mitochondrial	PGP	phosphatase
Hydrolase_3	PF08282.7	gi|332797826|ref|YP_004459326.1|	-	0.0063	16.1	0.1	0.024	14.2	0.0	1.9	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
FAD_binding_2	PF00890.19	gi|332797827|ref|YP_004459327.1|	-	1.8e-112	376.2	0.4	2.2e-112	375.9	0.3	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|332797827|ref|YP_004459327.1|	-	1.6e-44	150.8	0.2	2.6e-44	150.2	0.1	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|332797827|ref|YP_004459327.1|	-	1.8e-10	40.2	0.9	3.9e-07	29.2	0.4	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|332797827|ref|YP_004459327.1|	-	1.4e-06	27.1	0.2	0.00011	20.8	0.3	2.2	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|332797827|ref|YP_004459327.1|	-	3.7e-06	26.9	0.1	1.7e-05	24.8	0.0	2.2	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|332797827|ref|YP_004459327.1|	-	5.6e-06	25.6	0.6	0.011	14.8	0.1	2.8	3	0	0	3	3	3	2	Thi4	family
GIDA	PF01134.17	gi|332797827|ref|YP_004459327.1|	-	0.00011	21.1	2.0	0.00055	18.9	1.0	2.0	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|332797827|ref|YP_004459327.1|	-	0.00036	20.5	0.3	0.0014	18.6	0.2	2.1	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|332797827|ref|YP_004459327.1|	-	0.00088	18.4	0.3	0.0014	17.7	0.2	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|332797827|ref|YP_004459327.1|	-	0.01	14.9	0.8	0.078	12.0	0.4	2.0	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|332797827|ref|YP_004459327.1|	-	0.056	12.3	0.1	0.095	11.5	0.1	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|332797827|ref|YP_004459327.1|	-	0.39	11.1	2.1	1.4	9.3	1.5	2.0	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Fer2_3	PF13085.1	gi|332797828|ref|YP_004459328.1|	-	1e-33	115.4	0.3	2.3e-33	114.2	0.0	1.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|332797828|ref|YP_004459328.1|	-	1e-11	44.6	2.7	1e-11	44.6	1.9	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797828|ref|YP_004459328.1|	-	8.6e-10	38.7	12.6	9e-09	35.4	3.2	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332797828|ref|YP_004459328.1|	-	1.4e-07	31.1	4.6	1.4e-07	31.1	3.2	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797828|ref|YP_004459328.1|	-	3.1e-07	30.6	5.6	3.1e-07	30.6	3.9	2.6	2	2	1	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332797828|ref|YP_004459328.1|	-	2.8e-06	27.5	15.0	6.1e-05	23.2	4.9	3.0	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|332797828|ref|YP_004459328.1|	-	9e-06	25.3	15.3	0.00014	21.5	0.6	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|332797828|ref|YP_004459328.1|	-	5e-05	23.6	7.5	0.046	14.1	0.0	3.0	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|332797828|ref|YP_004459328.1|	-	0.0001	21.7	18.3	0.0043	16.5	0.9	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|332797828|ref|YP_004459328.1|	-	0.00079	19.9	3.6	0.17	12.4	0.4	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|332797828|ref|YP_004459328.1|	-	0.0012	19.5	8.6	0.18	12.6	0.1	3.3	3	1	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|332797828|ref|YP_004459328.1|	-	0.0013	18.4	18.6	0.0032	17.2	0.6	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|332797828|ref|YP_004459328.1|	-	0.0014	18.3	9.6	0.026	14.3	0.2	2.9	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|332797828|ref|YP_004459328.1|	-	0.014	15.7	7.8	0.047	14.0	1.0	3.0	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain
Fer2	PF00111.22	gi|332797828|ref|YP_004459328.1|	-	0.042	13.6	0.6	0.042	13.6	0.4	2.2	2	0	0	2	2	2	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_4	PF12800.2	gi|332797828|ref|YP_004459328.1|	-	0.22	11.9	19.8	0.12	12.8	1.2	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
CCG	PF02754.11	gi|332797829|ref|YP_004459329.1|	-	1.8e-36	123.9	3.2	8.7e-21	73.7	0.2	2.6	3	0	0	3	3	3	2	Cysteine-rich	domain
UBA_3	PF09288.5	gi|332797830|ref|YP_004459330.1|	-	0.073	12.6	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Fungal	ubiquitin-associated	domain
VWA_2	PF13519.1	gi|332797831|ref|YP_004459331.1|	-	8.7e-10	38.9	0.1	2.4e-09	37.5	0.0	1.8	2	1	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|332797831|ref|YP_004459331.1|	-	1.4e-06	28.1	2.3	3.7e-06	26.7	0.1	2.5	3	0	0	3	3	3	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|332797831|ref|YP_004459331.1|	-	1.7e-06	27.8	0.0	3.3e-06	26.8	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|332797831|ref|YP_004459331.1|	-	7.9e-06	25.1	0.0	1.7e-05	24.0	0.0	1.5	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
Activator-TraM	PF11657.3	gi|332797831|ref|YP_004459331.1|	-	0.03	13.8	1.9	0.066	12.7	1.4	1.6	1	0	0	1	1	1	0	Transcriptional	activator	TraM
PP2C_2	PF13672.1	gi|332797831|ref|YP_004459331.1|	-	0.051	12.9	1.7	0.44	9.9	0.0	2.4	2	0	0	2	2	2	0	Protein	phosphatase	2C
AAA_5	PF07728.9	gi|332797832|ref|YP_004459332.1|	-	7.5e-29	100.2	0.0	5.5e-28	97.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|332797832|ref|YP_004459332.1|	-	2.4e-07	30.9	0.3	1.8e-06	28.0	0.0	2.3	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|332797832|ref|YP_004459332.1|	-	6.6e-05	23.0	0.4	0.00045	20.3	0.0	2.5	2	2	0	2	2	2	1	AAA	domain
AAA_3	PF07726.6	gi|332797832|ref|YP_004459332.1|	-	7.3e-05	22.3	0.0	0.00012	21.6	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|332797832|ref|YP_004459332.1|	-	0.0001	21.5	0.0	0.00087	18.5	0.0	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA	PF00004.24	gi|332797832|ref|YP_004459332.1|	-	0.00013	22.1	0.0	0.00045	20.4	0.0	2.0	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|332797832|ref|YP_004459332.1|	-	0.0016	17.9	0.0	0.0045	16.4	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
MCM	PF00493.18	gi|332797832|ref|YP_004459332.1|	-	0.002	17.0	0.0	0.0063	15.3	0.0	1.7	2	0	0	2	2	2	1	MCM2/3/5	family
AAA_17	PF13207.1	gi|332797832|ref|YP_004459332.1|	-	0.0025	18.6	0.2	0.017	15.9	0.2	2.4	1	1	0	1	1	1	1	AAA	domain
HGD-D	PF06050.8	gi|332797832|ref|YP_004459332.1|	-	0.018	13.8	0.3	0.05	12.4	0.1	1.7	2	0	0	2	2	2	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
PMC2NT	PF08066.7	gi|332797832|ref|YP_004459332.1|	-	0.022	15.0	0.0	0.05	13.9	0.0	1.6	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
AAA_19	PF13245.1	gi|332797832|ref|YP_004459332.1|	-	0.032	13.9	0.0	0.066	12.9	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|332797832|ref|YP_004459332.1|	-	0.087	12.8	0.2	0.66	10.0	0.0	2.6	2	2	0	2	2	2	0	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|332797832|ref|YP_004459332.1|	-	0.7	10.2	3.4	2.9	8.1	0.1	2.9	1	1	1	2	2	2	0	AAA	domain
tRNA_anti-codon	PF01336.20	gi|332797833|ref|YP_004459333.1|	-	9.5e-09	35.0	3.2	1.4e-08	34.5	2.2	1.2	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
CopK	PF11525.3	gi|332797833|ref|YP_004459333.1|	-	0.016	14.8	1.5	0.079	12.6	0.4	2.3	1	1	2	3	3	3	0	Copper	resistance	protein	K
PqqD	PF05402.7	gi|332797834|ref|YP_004459334.1|	-	5.7e-11	42.2	0.1	6.7e-11	42.0	0.1	1.2	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
MoeA_N	PF03453.12	gi|332797835|ref|YP_004459335.1|	-	5e-47	159.2	0.0	1.1e-46	158.0	0.0	1.6	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|332797835|ref|YP_004459335.1|	-	2e-31	108.3	0.0	3.1e-31	107.7	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|332797835|ref|YP_004459335.1|	-	1.6e-11	43.9	0.0	5.7e-11	42.2	0.0	2.0	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
GHMP_kinases_N	PF00288.21	gi|332797836|ref|YP_004459336.1|	-	4.7e-19	68.2	0.3	9.6e-19	67.2	0.2	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|332797836|ref|YP_004459336.1|	-	2.2e-09	37.3	0.0	9.2e-09	35.3	0.0	1.9	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
Cys_Met_Meta_PP	PF01053.15	gi|332797837|ref|YP_004459337.1|	-	1.7e-128	428.1	0.0	2e-128	427.9	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|332797837|ref|YP_004459337.1|	-	7e-08	31.8	0.0	1.8e-07	30.4	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|332797837|ref|YP_004459337.1|	-	2.7e-05	23.1	0.0	0.00074	18.3	0.0	2.0	2	0	0	2	2	2	1	Aminotransferase	class-V
GDC-P	PF02347.11	gi|332797837|ref|YP_004459337.1|	-	0.00039	19.2	0.0	0.00061	18.5	0.0	1.2	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Met_gamma_lyase	PF06838.6	gi|332797837|ref|YP_004459337.1|	-	0.00096	17.5	0.0	0.27	9.4	0.0	2.2	2	0	0	2	2	2	2	Methionine	gamma-lyase
Beta_elim_lyase	PF01212.16	gi|332797837|ref|YP_004459337.1|	-	0.011	14.9	0.0	0.079	12.0	0.0	2.1	1	1	0	1	1	1	0	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|332797837|ref|YP_004459337.1|	-	0.097	11.6	0.3	1.7	7.5	0.0	2.8	3	0	0	3	3	3	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
zf-C2H2_4	PF13894.1	gi|332797838|ref|YP_004459338.1|	-	0.058	13.7	0.4	0.1	12.9	0.2	1.4	1	0	0	1	1	1	0	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|332797838|ref|YP_004459338.1|	-	0.096	12.8	0.1	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
DUF1152	PF06626.7	gi|332797840|ref|YP_004459340.1|	-	7.5e-112	373.2	0.0	8.9e-112	373.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
DUF3883	PF13020.1	gi|332797841|ref|YP_004459341.1|	-	0.00059	19.5	0.3	0.0017	18.0	0.1	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF3883)
DnaB_2	PF07261.6	gi|332797841|ref|YP_004459341.1|	-	0.011	15.3	0.5	0.079	12.5	0.1	2.5	2	1	0	2	2	2	0	Replication	initiation	and	membrane	attachment
RE_EcoO109I	PF14511.1	gi|332797841|ref|YP_004459341.1|	-	0.018	14.4	0.0	0.028	13.8	0.0	1.3	1	0	0	1	1	1	0	Type	II	restriction	endonuclease	EcoO109I
Hjc	PF01870.13	gi|332797841|ref|YP_004459341.1|	-	0.023	14.2	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	Archaeal	holliday	junction	resolvase	(hjc)
DUF3942	PF13078.1	gi|332797841|ref|YP_004459341.1|	-	0.023	14.7	1.6	0.051	13.6	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3942)
KH_1	PF00013.24	gi|332797842|ref|YP_004459342.1|	-	2.1e-06	27.2	8.3	2.4e-05	23.8	3.9	2.4	2	0	0	2	2	2	1	KH	domain
KH_3	PF13014.1	gi|332797842|ref|YP_004459342.1|	-	0.00039	19.9	2.3	0.0056	16.2	1.1	2.6	2	0	0	2	2	2	1	KH	domain
Nab2	PF11517.3	gi|332797842|ref|YP_004459342.1|	-	0.042	13.9	0.1	0.11	12.5	0.0	1.7	2	0	0	2	2	2	0	Nuclear	abundant	poly(A)	RNA-bind	protein	2	(Nab2)
DUF2963	PF11178.3	gi|332797842|ref|YP_004459342.1|	-	0.12	11.8	0.2	0.12	11.8	0.1	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2963)
RIO1	PF01163.17	gi|332797843|ref|YP_004459343.1|	-	4.6e-61	205.4	0.9	4.6e-61	205.4	0.6	1.4	2	0	0	2	2	2	1	RIO1	family
Kdo	PF06293.9	gi|332797843|ref|YP_004459343.1|	-	0.0032	16.5	0.0	0.023	13.7	0.0	2.0	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|332797843|ref|YP_004459343.1|	-	0.016	14.9	0.0	0.051	13.3	0.0	1.8	2	1	1	3	3	3	0	Phosphotransferase	enzyme	family
eIF-1a	PF01176.14	gi|332797844|ref|YP_004459344.1|	-	2.9e-26	90.6	0.5	3.7e-26	90.3	0.4	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
Thiolase_N	PF00108.18	gi|332797845|ref|YP_004459345.1|	-	1.2e-91	306.3	2.9	1.6e-91	305.9	2.0	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|332797845|ref|YP_004459345.1|	-	1.6e-37	127.6	0.1	4.3e-36	123.0	0.0	2.4	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|332797845|ref|YP_004459345.1|	-	8.3e-07	28.7	2.1	5.9e-06	25.9	1.1	2.2	1	1	0	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
SpoVAD	PF07451.6	gi|332797845|ref|YP_004459345.1|	-	0.00046	18.7	0.0	0.0034	15.8	0.0	2.0	2	0	0	2	2	2	1	Stage	V	sporulation	protein	AD	(SpoVAD)
FAE1_CUT1_RppA	PF08392.7	gi|332797845|ref|YP_004459345.1|	-	0.015	14.3	0.2	0.026	13.6	0.1	1.3	1	0	0	1	1	1	0	FAE1/Type	III	polyketide	synthase-like	protein
ACP_syn_III	PF08545.5	gi|332797845|ref|YP_004459345.1|	-	0.096	12.3	1.1	2.3	7.9	0.2	2.3	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Radical_SAM	PF04055.16	gi|332797846|ref|YP_004459346.1|	-	5e-28	98.3	0.0	2.1e-27	96.3	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|332797846|ref|YP_004459346.1|	-	3.3e-20	71.7	0.0	6e-20	70.9	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|332797846|ref|YP_004459346.1|	-	2.6e-07	30.3	0.3	5.5e-07	29.2	0.2	1.6	1	0	0	1	1	1	1	TRAM	domain
eIF-5_eIF-2B	PF01873.12	gi|332797847|ref|YP_004459347.1|	-	2.4e-30	104.7	0.5	2.7e-30	104.5	0.3	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
DUF2387	PF09526.5	gi|332797847|ref|YP_004459347.1|	-	0.012	15.5	0.2	0.02	14.7	0.2	1.4	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
TMEM156	PF15106.1	gi|332797847|ref|YP_004459347.1|	-	0.073	12.2	0.5	0.18	11.0	0.0	1.7	1	1	0	2	2	2	0	TMEM156	protein	family
HI0933_like	PF03486.9	gi|332797847|ref|YP_004459347.1|	-	0.14	10.6	0.0	0.16	10.4	0.0	1.1	1	0	0	1	1	1	0	HI0933-like	protein
Cys_rich_KTR	PF14205.1	gi|332797847|ref|YP_004459347.1|	-	0.15	11.4	5.2	0.94	8.9	0.0	2.9	2	1	1	3	3	3	0	Cysteine-rich	KTR
DUF424	PF04242.8	gi|332797848|ref|YP_004459348.1|	-	9.8e-26	89.6	1.9	1.1e-25	89.4	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
NMD3	PF04981.8	gi|332797849|ref|YP_004459349.1|	-	1.7e-46	158.2	4.6	2e-46	158.0	3.2	1.0	1	0	0	1	1	1	1	NMD3	family
DZR	PF12773.2	gi|332797849|ref|YP_004459349.1|	-	0.21	11.4	4.3	0.26	11.1	0.5	2.5	2	1	0	2	2	2	0	Double	zinc	ribbon
DUF2256	PF10013.4	gi|332797849|ref|YP_004459349.1|	-	0.87	9.4	5.3	2.7	7.8	0.1	3.2	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zf-ribbon_3	PF13248.1	gi|332797849|ref|YP_004459349.1|	-	2.7	7.3	4.7	0.37	10.0	0.5	1.7	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF4428	PF14471.1	gi|332797849|ref|YP_004459349.1|	-	4.1	7.2	12.3	6.6	6.5	0.0	4.3	4	1	0	4	4	4	0	Domain	of	unknown	function	(DUF4428)
zf-HIT	PF04438.11	gi|332797849|ref|YP_004459349.1|	-	6.1	6.5	8.1	5.2	6.7	0.1	3.1	3	0	0	3	3	3	0	HIT	zinc	finger
RNase_HII	PF01351.13	gi|332797850|ref|YP_004459350.1|	-	2.8e-35	121.7	0.2	3.1e-35	121.6	0.1	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
TGS	PF02824.16	gi|332797851|ref|YP_004459351.1|	-	6.6e-21	73.9	0.0	1.1e-20	73.1	0.0	1.4	1	0	0	1	1	1	1	TGS	domain
T2SF	PF00482.18	gi|332797852|ref|YP_004459352.1|	-	2e-17	63.2	5.9	8.3e-11	41.8	0.2	5.2	6	0	0	6	6	6	2	Type	II	secretion	system	(T2SS),	protein	F
Rep_fac_C	PF08542.6	gi|332797852|ref|YP_004459352.1|	-	0.0083	16.0	0.1	0.042	13.8	0.0	2.3	2	0	0	2	2	2	1	Replication	factor	C	C-terminal	domain
TSCPD	PF12637.2	gi|332797852|ref|YP_004459352.1|	-	0.033	14.1	0.0	7.3	6.6	0.0	2.7	2	0	0	2	2	2	0	TSCPD	domain
T2SE	PF00437.15	gi|332797853|ref|YP_004459353.1|	-	2.2e-45	154.7	0.0	3.7e-45	153.9	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
MobB	PF03205.9	gi|332797853|ref|YP_004459353.1|	-	0.0043	16.7	0.1	0.0096	15.6	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF87	PF01935.12	gi|332797853|ref|YP_004459353.1|	-	0.0067	16.2	0.3	0.018	14.9	0.0	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_29	PF13555.1	gi|332797853|ref|YP_004459353.1|	-	0.026	14.0	0.2	0.25	10.8	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
SRP54	PF00448.17	gi|332797853|ref|YP_004459353.1|	-	0.042	13.2	0.0	0.072	12.5	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|332797853|ref|YP_004459353.1|	-	0.049	14.4	0.1	0.24	12.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|332797853|ref|YP_004459353.1|	-	0.05	13.7	0.0	0.14	12.2	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|332797853|ref|YP_004459353.1|	-	0.054	13.8	0.0	0.14	12.4	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
cobW	PF02492.14	gi|332797853|ref|YP_004459353.1|	-	0.057	12.8	0.8	0.12	11.8	0.0	1.9	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ResIII	PF04851.10	gi|332797853|ref|YP_004459353.1|	-	0.064	13.0	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.1	gi|332797853|ref|YP_004459353.1|	-	0.065	12.8	0.1	0.18	11.3	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|332797853|ref|YP_004459353.1|	-	0.091	12.6	0.1	0.81	9.5	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
Arf	PF00025.16	gi|332797853|ref|YP_004459353.1|	-	0.11	11.7	0.5	4.4	6.5	0.0	2.3	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
Viral_helicase1	PF01443.13	gi|332797853|ref|YP_004459353.1|	-	0.21	11.0	0.0	0.39	10.2	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Glyco_tranf_2_3	PF13641.1	gi|332797854|ref|YP_004459354.1|	-	4.4e-35	121.5	0.0	5.7e-35	121.1	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|332797854|ref|YP_004459354.1|	-	1.2e-25	90.1	3.0	1.8e-25	89.5	2.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|332797854|ref|YP_004459354.1|	-	1.6e-23	83.4	0.5	3.1e-23	82.4	0.4	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_2	PF10111.4	gi|332797854|ref|YP_004459354.1|	-	6e-17	61.6	1.9	8.5e-17	61.1	1.3	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|332797854|ref|YP_004459354.1|	-	1.1e-10	41.1	0.0	6.8e-10	38.5	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|332797854|ref|YP_004459354.1|	-	0.0017	16.7	5.4	0.0029	16.0	3.8	1.4	1	0	0	1	1	1	1	Cellulose	synthase
P2	PF07194.6	gi|332797854|ref|YP_004459354.1|	-	0.04	13.7	0.4	0.13	12.1	0.1	1.9	1	1	1	2	2	2	0	P2	response	regulator	binding	domain
Pyrophosphatase	PF00719.14	gi|332797855|ref|YP_004459355.1|	-	3.7e-60	201.8	0.3	4.2e-60	201.7	0.2	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
HD_3	PF13023.1	gi|332797856|ref|YP_004459356.1|	-	8.6e-17	61.3	0.0	5e-16	58.8	0.0	1.8	1	1	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|332797856|ref|YP_004459356.1|	-	2.7e-09	37.1	0.3	4.8e-08	33.0	0.2	2.2	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|332797856|ref|YP_004459356.1|	-	2.6e-05	23.5	0.0	3.4e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	HDOD	domain
HD_2	PF12917.2	gi|332797856|ref|YP_004459356.1|	-	0.0059	16.4	3.2	0.19	11.4	2.2	2.5	1	1	0	1	1	1	1	HD	containing	hydrolase-like	enzyme
Phos_pyr_kin	PF08543.7	gi|332797857|ref|YP_004459357.1|	-	9.3e-74	247.7	0.1	1.2e-73	247.3	0.1	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|332797857|ref|YP_004459357.1|	-	8.7e-52	174.9	0.0	1.7e-51	173.9	0.0	1.5	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|332797857|ref|YP_004459357.1|	-	1.8e-10	40.4	0.0	2.7e-10	39.8	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|332797857|ref|YP_004459357.1|	-	0.11	11.7	0.0	0.2	10.9	0.0	1.4	1	0	0	1	1	1	0	Carbohydrate	kinase
MoaE	PF02391.12	gi|332797858|ref|YP_004459358.1|	-	3.7e-18	65.4	0.1	5.4e-18	64.8	0.0	1.2	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|332797858|ref|YP_004459358.1|	-	2.3e-12	47.1	0.0	5.9e-12	45.8	0.0	1.7	1	0	0	1	1	1	1	ThiS	family
DUF3132	PF11330.3	gi|332797858|ref|YP_004459358.1|	-	0.11	12.2	0.2	0.26	11.1	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3132)
MotCF	PF09158.5	gi|332797858|ref|YP_004459358.1|	-	0.61	9.7	0.0	0.61	9.7	0.0	2.7	3	1	0	3	3	3	0	Bacteriophage	T4	MotA,	C-terminal
FAD_binding_4	PF01565.18	gi|332797860|ref|YP_004459360.1|	-	1.2e-08	34.4	0.0	4.5e-08	32.6	0.0	1.9	2	0	0	2	2	2	1	FAD	binding	domain
Fer4_8	PF13183.1	gi|332797860|ref|YP_004459360.1|	-	2.6e-05	24.1	1.3	4.7e-05	23.3	0.9	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|332797860|ref|YP_004459360.1|	-	0.00013	22.3	1.6	0.12	12.8	0.1	2.7	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332797860|ref|YP_004459360.1|	-	0.00017	21.8	2.0	0.00042	20.6	1.4	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|332797860|ref|YP_004459360.1|	-	0.0012	18.6	2.8	0.0027	17.5	2.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|332797860|ref|YP_004459360.1|	-	0.0044	17.3	2.4	0.014	15.7	1.7	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332797860|ref|YP_004459360.1|	-	0.014	15.6	3.4	0.073	13.3	2.5	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
CCG	PF02754.11	gi|332797860|ref|YP_004459360.1|	-	0.028	14.4	0.0	0.096	12.7	0.0	1.9	1	0	0	1	1	1	0	Cysteine-rich	domain
RFC1	PF08519.7	gi|332797860|ref|YP_004459360.1|	-	0.053	13.2	0.8	0.14	11.8	0.5	1.8	2	0	0	2	2	2	0	Replication	factor	RFC1	C	terminal	domain
Fer4_10	PF13237.1	gi|332797860|ref|YP_004459360.1|	-	0.39	10.5	5.4	2.1	8.1	3.7	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
GHMP_kinases_N	PF00288.21	gi|332797861|ref|YP_004459361.1|	-	3.7e-08	33.2	0.3	5.7e-08	32.7	0.2	1.3	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
DUF137	PF02006.11	gi|332797862|ref|YP_004459362.1|	-	8.6e-75	250.0	6.1	1e-74	249.7	4.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
ABC_tran	PF00005.22	gi|332797864|ref|YP_004459364.1|	-	3.9e-27	95.2	0.0	5.8e-27	94.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|332797864|ref|YP_004459364.1|	-	1.8e-13	51.1	0.2	5.5e-11	42.9	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|332797864|ref|YP_004459364.1|	-	0.00077	18.7	0.6	0.52	9.4	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_30	PF13604.1	gi|332797864|ref|YP_004459364.1|	-	0.0015	18.1	0.0	0.0025	17.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|332797864|ref|YP_004459364.1|	-	0.0018	19.0	0.2	0.0029	18.4	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|332797864|ref|YP_004459364.1|	-	0.0024	18.2	5.7	0.0057	17.0	4.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|332797864|ref|YP_004459364.1|	-	0.0034	15.9	0.1	0.4	9.0	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArgK	PF03308.11	gi|332797864|ref|YP_004459364.1|	-	0.0051	15.6	0.2	0.0084	14.9	0.1	1.2	1	0	0	1	1	1	1	ArgK	protein
AAA_19	PF13245.1	gi|332797864|ref|YP_004459364.1|	-	0.014	15.1	0.1	0.033	13.9	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
SRP54	PF00448.17	gi|332797864|ref|YP_004459364.1|	-	0.025	14.0	0.1	0.044	13.2	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
BCA_ABC_TP_C	PF12399.3	gi|332797864|ref|YP_004459364.1|	-	0.037	13.7	0.1	0.069	12.8	0.1	1.5	1	0	0	1	1	1	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
Rad17	PF03215.10	gi|332797864|ref|YP_004459364.1|	-	0.044	12.4	0.0	0.045	12.4	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|332797864|ref|YP_004459364.1|	-	0.051	13.7	0.4	0.14	12.3	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|332797864|ref|YP_004459364.1|	-	0.061	12.8	0.1	0.11	12.0	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|332797864|ref|YP_004459364.1|	-	0.066	12.9	0.1	0.14	11.8	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|332797864|ref|YP_004459364.1|	-	0.14	12.3	0.4	0.31	11.2	0.3	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC2_membrane_3	PF12698.2	gi|332797865|ref|YP_004459365.1|	-	1.1e-18	67.4	39.5	1.5e-18	66.9	27.4	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|332797865|ref|YP_004459365.1|	-	6.7e-12	44.8	34.4	1.4e-10	40.4	23.8	2.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|332797865|ref|YP_004459365.1|	-	1.6e-10	40.5	42.5	5.6e-09	35.5	29.5	2.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
AsnC_trans_reg	PF01037.16	gi|332797866|ref|YP_004459366.1|	-	1.5e-10	40.6	0.1	1.7e-10	40.4	0.1	1.1	1	0	0	1	1	1	1	AsnC	family
DUF2536	PF10750.4	gi|332797866|ref|YP_004459366.1|	-	0.0024	17.4	0.1	0.0061	16.1	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2536)
NapD	PF03927.8	gi|332797866|ref|YP_004459366.1|	-	0.0059	16.4	0.1	2.2	8.1	0.0	2.1	1	1	1	2	2	2	2	NapD	protein
GYD	PF08734.6	gi|332797866|ref|YP_004459366.1|	-	0.013	15.2	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
HMA	PF00403.21	gi|332797866|ref|YP_004459366.1|	-	0.018	15.1	0.5	0.022	14.8	0.3	1.2	1	0	0	1	1	1	0	Heavy-metal-associated	domain
ACT_4	PF13291.1	gi|332797866|ref|YP_004459366.1|	-	0.03	14.6	0.8	0.1	12.9	0.3	1.8	1	1	1	2	2	2	0	ACT	domain
Spore_YhcN_YlaJ	PF09580.5	gi|332797866|ref|YP_004459366.1|	-	0.12	12.5	1.1	0.13	12.3	0.7	1.1	1	0	0	1	1	1	0	Sporulation	lipoprotein	YhcN/YlaJ	(Spore_YhcN_YlaJ)
BLOC1_2	PF10046.4	gi|332797867|ref|YP_004459367.1|	-	0.00034	20.6	0.8	0.00044	20.3	0.5	1.2	1	0	0	1	1	1	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
RHH_1	PF01402.16	gi|332797867|ref|YP_004459367.1|	-	0.0021	17.8	0.1	0.0091	15.8	0.0	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|332797867|ref|YP_004459367.1|	-	0.014	15.0	0.0	0.24	11.1	0.0	2.3	2	1	0	2	2	2	0	Ribbon-helix-helix	domain
Med4	PF10018.4	gi|332797867|ref|YP_004459367.1|	-	0.053	12.9	0.8	0.081	12.3	0.2	1.6	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
RHH_1	PF01402.16	gi|332797868|ref|YP_004459368.1|	-	8.2e-11	41.3	0.3	1.2e-10	40.8	0.2	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|332797868|ref|YP_004459368.1|	-	0.00016	21.3	0.5	0.00021	20.9	0.3	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
Lactamase_B_3	PF13483.1	gi|332797869|ref|YP_004459369.1|	-	8.3e-31	106.8	0.1	1e-30	106.5	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|332797869|ref|YP_004459369.1|	-	1.2e-15	57.5	1.4	1.8e-08	34.1	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|332797869|ref|YP_004459369.1|	-	0.015	14.9	5.2	0.065	12.8	2.3	2.1	2	0	0	2	2	2	0	Metallo-beta-lactamase	superfamily
HMGL-like	PF00682.14	gi|332797870|ref|YP_004459370.1|	-	5.2e-62	209.5	2.5	6.7e-62	209.2	1.7	1.1	1	0	0	1	1	1	1	HMGL-like
MAF_flag10	PF01973.13	gi|332797871|ref|YP_004459371.1|	-	4.9e-31	107.5	0.7	6.8e-31	107.0	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|332797871|ref|YP_004459371.1|	-	0.0019	17.8	0.2	0.0066	16.0	0.1	1.9	1	1	1	2	2	2	1	Thiamin	pyrophosphokinase,	catalytic	domain
THF_DHG_CYH_C	PF02882.14	gi|332797871|ref|YP_004459371.1|	-	0.32	10.0	3.1	1.1	8.3	0.6	2.1	1	1	1	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
HEPN	PF05168.9	gi|332797873|ref|YP_004459373.1|	-	0.027	14.3	0.0	0.036	13.9	0.0	1.2	1	0	0	1	1	1	0	HEPN	domain
Syntaxin-6_N	PF09177.6	gi|332797873|ref|YP_004459373.1|	-	0.028	14.8	1.1	0.13	12.6	0.8	2.2	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
RNase_H_2	PF13482.1	gi|332797873|ref|YP_004459373.1|	-	0.039	13.7	0.0	7.1	6.4	0.0	2.1	1	1	1	2	2	2	0	RNase_H	superfamily
DASH_Spc34	PF08657.5	gi|332797873|ref|YP_004459373.1|	-	0.059	13.0	0.1	0.065	12.9	0.0	1.1	1	0	0	1	1	1	0	DASH	complex	subunit	Spc34
ING	PF12998.2	gi|332797873|ref|YP_004459373.1|	-	0.08	13.2	0.4	0.2	11.9	0.3	1.6	1	1	0	1	1	1	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Viral_DNA_bp	PF00747.12	gi|332797875|ref|YP_004459375.1|	-	0.034	11.3	0.2	0.11	9.7	0.0	1.6	1	1	1	2	2	2	0	ssDNA	binding	protein
RRF_GI	PF12614.3	gi|332797875|ref|YP_004459375.1|	-	0.04	13.7	0.3	0.62	9.8	0.0	2.0	2	0	0	2	2	2	0	Ribosome	recycling	factor
PTPS	PF01242.14	gi|332797876|ref|YP_004459376.1|	-	1e-22	80.0	0.0	1.1e-22	79.9	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
DUF512	PF04459.7	gi|332797878|ref|YP_004459378.1|	-	2.2e-06	26.8	0.2	5.4e-06	25.6	0.1	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF512)
DUF4346	PF14251.1	gi|332797878|ref|YP_004459378.1|	-	9.1e-05	22.1	0.1	0.00033	20.3	0.1	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
Pterin_bind	PF00809.17	gi|332797878|ref|YP_004459378.1|	-	0.00073	18.9	0.0	0.0015	17.9	0.0	1.5	1	0	0	1	1	1	1	Pterin	binding	enzyme
CdhD	PF03599.11	gi|332797878|ref|YP_004459378.1|	-	0.0011	17.6	0.4	0.045	12.2	0.0	2.2	2	0	0	2	2	2	2	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
EcoRI	PF02963.11	gi|332797878|ref|YP_004459378.1|	-	0.0035	16.1	0.3	0.0065	15.3	0.2	1.3	1	0	0	1	1	1	1	Restriction	endonuclease	EcoRI
Pyr_redox_2	PF07992.9	gi|332797879|ref|YP_004459379.1|	-	4e-30	105.2	0.9	5.4e-30	104.7	0.6	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332797879|ref|YP_004459379.1|	-	6.3e-14	52.5	0.0	1.4e-13	51.4	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332797879|ref|YP_004459379.1|	-	1.6e-13	50.8	0.7	1.6e-13	50.8	0.5	2.4	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|332797879|ref|YP_004459379.1|	-	3.8e-06	26.0	0.2	0.0017	17.3	0.0	2.6	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|332797879|ref|YP_004459379.1|	-	1.4e-05	23.8	2.1	0.033	12.6	0.0	3.3	3	0	0	3	3	3	3	HI0933-like	protein
GIDA	PF01134.17	gi|332797879|ref|YP_004459379.1|	-	7.7e-05	21.7	6.7	0.21	10.4	0.0	4.1	3	2	0	4	4	4	3	Glucose	inhibited	division	protein	A
Thi4	PF01946.12	gi|332797879|ref|YP_004459379.1|	-	0.00027	20.1	8.6	0.35	9.9	0.1	3.2	2	1	1	3	3	3	3	Thi4	family
FAD_oxidored	PF12831.2	gi|332797879|ref|YP_004459379.1|	-	0.00068	18.8	0.4	0.018	14.1	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|332797879|ref|YP_004459379.1|	-	0.0058	16.8	1.8	0.052	13.8	0.3	2.4	2	1	0	2	2	2	1	Putative	NAD(P)-binding
FAD_binding_2	PF00890.19	gi|332797879|ref|YP_004459379.1|	-	0.0084	15.0	3.3	0.74	8.5	0.0	2.8	3	1	0	4	4	4	2	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|332797879|ref|YP_004459379.1|	-	0.022	14.5	1.2	3.2	7.4	0.0	2.8	3	0	0	3	3	3	0	FAD-NAD(P)-binding
DAO	PF01266.19	gi|332797879|ref|YP_004459379.1|	-	0.15	10.9	6.5	0.051	12.4	0.4	2.9	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
Inositol_P	PF00459.20	gi|332797880|ref|YP_004459380.1|	-	9.3e-27	94.0	0.0	1.1e-26	93.7	0.0	1.0	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|332797880|ref|YP_004459380.1|	-	4.7e-07	28.9	0.0	6.8e-07	28.4	0.0	1.2	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
AAA	PF00004.24	gi|332797881|ref|YP_004459381.1|	-	5.9e-83	275.6	0.0	9.1e-41	139.1	0.1	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|332797881|ref|YP_004459381.1|	-	8e-18	65.4	0.7	1.4e-08	35.5	0.1	3.6	2	2	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|332797881|ref|YP_004459381.1|	-	9.6e-16	57.8	0.2	3.2e-07	30.2	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
AAA_2	PF07724.9	gi|332797881|ref|YP_004459381.1|	-	1.2e-14	54.6	0.0	3.3e-08	33.6	0.0	2.8	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|332797881|ref|YP_004459381.1|	-	3.7e-13	49.7	2.0	0.00091	19.3	0.0	4.5	2	2	1	3	3	3	2	AAA	domain
RuvB_N	PF05496.7	gi|332797881|ref|YP_004459381.1|	-	9.6e-13	47.7	0.3	4.6e-07	29.1	0.1	3.5	3	1	0	3	3	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|332797881|ref|YP_004459381.1|	-	1.7e-12	47.6	0.0	2.4e-05	24.3	0.0	3.0	2	2	1	3	3	3	2	AAA	ATPase	domain
AAA_18	PF13238.1	gi|332797881|ref|YP_004459381.1|	-	5.4e-11	42.9	0.4	2.1e-05	24.8	0.1	3.5	2	2	1	3	3	2	2	AAA	domain
AAA_5	PF07728.9	gi|332797881|ref|YP_004459381.1|	-	1.2e-10	41.2	3.4	0.00039	20.1	0.4	4.5	3	2	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
AAA_25	PF13481.1	gi|332797881|ref|YP_004459381.1|	-	1.2e-09	37.9	0.8	0.1	12.0	0.1	3.5	2	1	1	3	3	3	3	AAA	domain
RNA_helicase	PF00910.17	gi|332797881|ref|YP_004459381.1|	-	4.5e-09	36.4	0.2	0.0024	18.0	0.0	3.2	3	1	0	3	3	2	2	RNA	helicase
AAA_33	PF13671.1	gi|332797881|ref|YP_004459381.1|	-	8.7e-09	35.3	0.0	0.0023	17.8	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
NACHT	PF05729.7	gi|332797881|ref|YP_004459381.1|	-	1.7e-08	34.2	0.9	0.1	12.2	0.0	4.3	2	2	2	4	4	4	2	NACHT	domain
IstB_IS21	PF01695.12	gi|332797881|ref|YP_004459381.1|	-	2.7e-08	33.4	0.0	0.0045	16.4	0.0	2.6	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|332797881|ref|YP_004459381.1|	-	2.4e-07	30.1	0.9	0.003	16.7	0.1	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|332797881|ref|YP_004459381.1|	-	6e-07	29.5	0.0	0.048	13.6	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_3	PF07726.6	gi|332797881|ref|YP_004459381.1|	-	8.7e-07	28.6	0.0	0.0067	16.0	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|332797881|ref|YP_004459381.1|	-	1.2e-06	27.7	0.1	0.013	14.6	0.0	3.0	3	0	0	3	3	3	2	Zeta	toxin
TIP49	PF06068.8	gi|332797881|ref|YP_004459381.1|	-	4.7e-06	25.5	0.0	0.021	13.5	0.0	2.7	2	0	0	2	2	2	2	TIP49	C-terminus
DUF815	PF05673.8	gi|332797881|ref|YP_004459381.1|	-	1.3e-05	24.3	0.0	0.047	12.6	0.0	2.9	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF815)
Rad17	PF03215.10	gi|332797881|ref|YP_004459381.1|	-	2.6e-05	23.1	0.1	0.21	10.2	0.0	2.7	2	1	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
AFG1_ATPase	PF03969.11	gi|332797881|ref|YP_004459381.1|	-	3.4e-05	22.8	0.0	0.028	13.2	0.0	2.6	2	0	0	2	2	2	2	AFG1-like	ATPase
AAA_24	PF13479.1	gi|332797881|ref|YP_004459381.1|	-	4.9e-05	23.0	9.2	0.0022	17.6	0.3	4.2	5	0	0	5	5	5	1	AAA	domain
UPF0079	PF02367.12	gi|332797881|ref|YP_004459381.1|	-	8.4e-05	22.1	0.5	0.19	11.3	0.0	3.0	2	1	1	3	3	3	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_19	PF13245.1	gi|332797881|ref|YP_004459381.1|	-	0.00011	21.8	0.0	0.69	9.7	0.0	2.7	2	0	0	2	2	2	2	Part	of	AAA	domain
ABC_tran	PF00005.22	gi|332797881|ref|YP_004459381.1|	-	0.00021	21.6	0.0	0.91	9.8	0.0	3.0	2	1	0	2	2	2	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|332797881|ref|YP_004459381.1|	-	0.00021	21.0	9.8	0.3	10.7	0.0	4.8	3	2	3	6	6	5	2	Archaeal	ATPase
Guanylate_kin	PF00625.16	gi|332797881|ref|YP_004459381.1|	-	0.00051	19.5	1.0	0.41	10.0	0.0	3.7	4	1	1	5	5	3	1	Guanylate	kinase
Sigma54_activat	PF00158.21	gi|332797881|ref|YP_004459381.1|	-	0.00061	19.3	0.0	1.1	8.7	0.0	2.8	2	1	0	2	2	2	2	Sigma-54	interaction	domain
KTI12	PF08433.5	gi|332797881|ref|YP_004459381.1|	-	0.00069	18.9	0.5	0.068	12.3	0.1	3.0	3	1	0	3	3	3	1	Chromatin	associated	protein	KTI12
NB-ARC	PF00931.17	gi|332797881|ref|YP_004459381.1|	-	0.001	18.0	0.0	0.11	11.2	0.0	2.6	3	0	0	3	3	3	1	NB-ARC	domain
Vps4_C	PF09336.5	gi|332797881|ref|YP_004459381.1|	-	0.0011	18.8	3.4	0.095	12.6	0.0	3.5	4	0	0	4	4	2	1	Vps4	C	terminal	oligomerisation	domain
Sigma54_activ_2	PF14532.1	gi|332797881|ref|YP_004459381.1|	-	0.0014	18.6	0.0	2.3	8.2	0.0	2.6	2	0	0	2	2	2	1	Sigma-54	interaction	domain
Parvo_NS1	PF01057.12	gi|332797881|ref|YP_004459381.1|	-	0.0015	17.4	0.0	0.13	11.0	0.0	2.3	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
ResIII	PF04851.10	gi|332797881|ref|YP_004459381.1|	-	0.0017	18.2	0.5	0.61	9.8	0.0	3.2	2	1	1	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
KaiC	PF06745.8	gi|332797881|ref|YP_004459381.1|	-	0.0018	17.4	3.9	0.7	8.9	0.1	3.5	3	1	0	3	3	3	2	KaiC
AAA_10	PF12846.2	gi|332797881|ref|YP_004459381.1|	-	0.0025	17.2	2.2	5.4	6.3	0.0	3.8	2	2	1	3	3	3	0	AAA-like	domain
PPV_E1_C	PF00519.12	gi|332797881|ref|YP_004459381.1|	-	0.0027	16.3	0.1	0.31	9.5	0.0	2.1	2	0	0	2	2	2	1	Papillomavirus	helicase
AAA_30	PF13604.1	gi|332797881|ref|YP_004459381.1|	-	0.0042	16.6	0.0	2.2	7.7	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
SRPRB	PF09439.5	gi|332797881|ref|YP_004459381.1|	-	0.0049	16.0	0.6	1.4	8.0	0.0	4.0	4	1	0	4	4	4	1	Signal	recognition	particle	receptor	beta	subunit
SKI	PF01202.17	gi|332797881|ref|YP_004459381.1|	-	0.0054	16.6	0.3	0.87	9.4	0.0	2.9	3	0	0	3	3	2	1	Shikimate	kinase
MMR_HSR1	PF01926.18	gi|332797881|ref|YP_004459381.1|	-	0.0055	16.6	0.1	2.6	8.0	0.0	3.3	2	2	0	2	2	2	1	50S	ribosome-binding	GTPase
ATP-synt_ab	PF00006.20	gi|332797881|ref|YP_004459381.1|	-	0.0061	16.0	0.0	1.9	7.9	0.0	2.4	2	1	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF258	PF03193.11	gi|332797881|ref|YP_004459381.1|	-	0.0071	15.5	0.0	1.6	7.8	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
Viral_helicase1	PF01443.13	gi|332797881|ref|YP_004459381.1|	-	0.0086	15.6	0.0	0.66	9.4	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
PhoH	PF02562.11	gi|332797881|ref|YP_004459381.1|	-	0.011	14.9	0.1	6	6.0	0.0	2.9	2	1	0	2	2	2	0	PhoH-like	protein
NTPase_1	PF03266.10	gi|332797881|ref|YP_004459381.1|	-	0.014	15.1	0.0	0.99	9.0	0.0	2.8	2	1	0	2	2	2	0	NTPase
DUF1677	PF07911.8	gi|332797881|ref|YP_004459381.1|	-	0.018	15.1	0.0	0.041	14.0	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1677)
DAP3	PF10236.4	gi|332797881|ref|YP_004459381.1|	-	0.023	13.6	0.0	3.3	6.5	0.0	2.4	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
T2SE	PF00437.15	gi|332797881|ref|YP_004459381.1|	-	0.024	13.5	0.0	5.6	5.7	0.0	2.7	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
PduV-EutP	PF10662.4	gi|332797881|ref|YP_004459381.1|	-	0.056	12.9	0.0	5.2	6.5	0.0	2.9	3	0	0	3	3	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
Glutaredoxin	PF00462.19	gi|332797881|ref|YP_004459381.1|	-	0.084	12.8	0.0	0.81	9.7	0.0	2.6	2	0	0	2	2	2	0	Glutaredoxin
SRP54	PF00448.17	gi|332797881|ref|YP_004459381.1|	-	0.17	11.2	2.7	7.2	5.9	0.1	3.3	3	1	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
Herpes_TK	PF00693.13	gi|332797881|ref|YP_004459381.1|	-	0.18	10.9	0.0	7	5.7	0.0	2.2	2	0	0	2	2	2	0	Thymidine	kinase	from	herpesvirus
DAO	PF01266.19	gi|332797882|ref|YP_004459382.1|	-	3.8e-18	65.5	0.0	2e-09	36.8	0.0	2.5	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|332797882|ref|YP_004459382.1|	-	5.1e-11	42.4	0.3	2e-10	40.5	0.1	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|332797882|ref|YP_004459382.1|	-	2.4e-09	36.6	0.8	5.1e-08	32.3	0.2	2.3	2	0	0	2	2	2	1	Thi4	family
FAD_binding_2	PF00890.19	gi|332797882|ref|YP_004459382.1|	-	1.2e-08	34.2	2.3	5.7e-05	22.1	0.3	2.9	3	0	0	3	3	3	2	FAD	binding	domain
Amino_oxidase	PF01593.19	gi|332797882|ref|YP_004459382.1|	-	2.1e-08	33.7	0.3	9.1e-05	21.7	0.0	3.1	3	0	0	3	3	3	2	Flavin	containing	amine	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332797882|ref|YP_004459382.1|	-	1.3e-06	28.4	0.1	5e-06	26.5	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|332797882|ref|YP_004459382.1|	-	6.9e-06	25.4	0.0	1.9e-05	23.9	0.0	1.7	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|332797882|ref|YP_004459382.1|	-	8.4e-06	24.6	2.5	0.047	12.3	0.4	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
HI0933_like	PF03486.9	gi|332797882|ref|YP_004459382.1|	-	8.6e-06	24.4	0.5	0.0018	16.8	0.1	2.5	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|332797882|ref|YP_004459382.1|	-	1.4e-05	24.3	0.1	5.3e-05	22.4	0.1	1.8	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|332797882|ref|YP_004459382.1|	-	0.00015	22.1	2.5	0.0015	18.8	0.4	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797882|ref|YP_004459382.1|	-	0.00016	20.6	6.1	0.0037	16.1	0.2	2.6	2	1	1	3	3	3	2	Glucose	inhibited	division	protein	A
GDI	PF00996.13	gi|332797882|ref|YP_004459382.1|	-	0.0012	17.2	0.1	0.68	8.1	0.0	2.2	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
Pyr_redox_3	PF13738.1	gi|332797882|ref|YP_004459382.1|	-	0.011	15.8	0.1	0.041	13.9	0.1	1.8	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|332797882|ref|YP_004459382.1|	-	0.052	13.3	0.1	0.12	12.1	0.1	1.6	1	0	0	1	1	1	0	FAD-NAD(P)-binding
XdhC_C	PF13478.1	gi|332797882|ref|YP_004459382.1|	-	0.082	13.2	0.0	4.9	7.4	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Lycopene_cycl	PF05834.7	gi|332797882|ref|YP_004459382.1|	-	0.11	11.3	0.6	0.25	10.2	0.1	1.8	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Phosphodiest	PF01663.17	gi|332797883|ref|YP_004459383.1|	-	1.4e-17	64.1	1.7	4.7e-16	59.0	1.1	2.6	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|332797883|ref|YP_004459383.1|	-	3.1e-06	26.9	0.1	8.3e-05	22.3	0.0	2.3	2	0	0	2	2	2	1	PglZ	domain
Metalloenzyme	PF01676.13	gi|332797883|ref|YP_004459383.1|	-	2.6e-05	23.7	0.3	0.00022	20.6	0.2	2.2	1	1	0	1	1	1	1	Metalloenzyme	superfamily
Pribosyltran	PF00156.22	gi|332797884|ref|YP_004459384.1|	-	4.2e-20	71.7	0.1	5.5e-20	71.3	0.1	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|332797884|ref|YP_004459384.1|	-	0.0017	17.5	0.0	0.0021	17.2	0.0	1.1	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
MM_CoA_mutase	PF01642.17	gi|332797885|ref|YP_004459385.1|	-	1.8e-190	633.5	0.0	2e-190	633.3	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
Glyoxalase_4	PF13669.1	gi|332797886|ref|YP_004459386.1|	-	1.5e-25	89.3	0.0	1.7e-25	89.1	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase	PF00903.20	gi|332797886|ref|YP_004459386.1|	-	8.5e-16	58.0	0.0	9.4e-16	57.9	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|332797886|ref|YP_004459386.1|	-	1.2e-10	41.9	0.0	1.4e-10	41.7	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_3	PF13468.1	gi|332797886|ref|YP_004459386.1|	-	1.3e-10	41.4	0.0	1.7e-10	41.0	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_5	PF14696.1	gi|332797886|ref|YP_004459386.1|	-	0.0013	18.6	0.0	0.0019	18.1	0.0	1.4	1	1	0	1	1	1	1	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
CppA_N	PF14506.1	gi|332797886|ref|YP_004459386.1|	-	0.0076	15.9	0.1	0.014	15.0	0.1	1.7	1	1	0	1	1	1	1	CppA	N-terminal
Osmo_CC	PF08946.5	gi|332797886|ref|YP_004459386.1|	-	0.015	15.3	5.4	0.054	13.5	0.2	2.8	3	0	0	3	3	3	0	Osmosensory	transporter	coiled	coil
HSP20	PF00011.16	gi|332797887|ref|YP_004459387.1|	-	2.6e-11	43.2	2.0	3.9e-10	39.4	1.4	2.3	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|332797887|ref|YP_004459387.1|	-	3.7e-06	27.3	1.7	7.7e-06	26.3	0.4	2.0	2	0	0	2	2	2	1	CS	domain
GvpH	PF05455.6	gi|332797887|ref|YP_004459387.1|	-	0.00011	21.8	0.0	0.00016	21.3	0.0	1.2	1	0	0	1	1	1	1	GvpH
FHA	PF00498.21	gi|332797887|ref|YP_004459387.1|	-	0.014	15.5	0.0	0.088	12.9	0.0	2.1	2	0	0	2	2	2	0	FHA	domain
PIH1	PF08190.7	gi|332797887|ref|YP_004459387.1|	-	0.04	13.3	0.0	0.066	12.6	0.0	1.3	1	0	0	1	1	1	0	pre-RNA	processing	PIH1/Nop17
zf-ZPR1	PF03367.8	gi|332797888|ref|YP_004459388.1|	-	1.4e-27	95.7	0.1	7e-26	90.3	0.0	2.0	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.1	gi|332797888|ref|YP_004459388.1|	-	0.00096	19.4	0.2	0.0019	18.4	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|332797888|ref|YP_004459388.1|	-	0.017	14.4	0.9	0.055	12.8	0.0	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-H2C2_2	PF13465.1	gi|332797888|ref|YP_004459388.1|	-	0.076	13.3	1.5	6.7	7.1	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
Zn_Tnp_IS1595	PF12760.2	gi|332797888|ref|YP_004459388.1|	-	0.083	12.7	0.5	0.33	10.8	0.4	2.0	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|332797888|ref|YP_004459388.1|	-	0.087	12.7	0.7	17	5.4	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
CpXC	PF14353.1	gi|332797888|ref|YP_004459388.1|	-	0.24	11.3	1.2	5.6	6.9	0.0	2.2	1	1	0	1	1	1	0	CpXC	protein
RNA_POL_M_15KD	PF02150.11	gi|332797888|ref|YP_004459388.1|	-	0.32	10.7	2.4	6.2	6.6	1.7	2.5	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_4	PF13717.1	gi|332797888|ref|YP_004459388.1|	-	0.33	10.6	4.0	5.1	6.8	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|332797888|ref|YP_004459388.1|	-	0.38	10.3	3.9	5.6	6.6	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|332797888|ref|YP_004459388.1|	-	0.91	9.4	5.9	2.4	8.0	0.2	2.6	3	0	0	3	3	3	0	Rubredoxin
zf-RanBP	PF00641.13	gi|332797888|ref|YP_004459388.1|	-	8	5.6	7.2	5.4	6.2	1.4	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
GTP_EFTU	PF00009.22	gi|332797889|ref|YP_004459389.1|	-	1.9e-22	79.5	1.4	2.5e-22	79.2	0.0	1.7	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|332797889|ref|YP_004459389.1|	-	4.1e-16	58.9	0.1	9.5e-16	57.7	0.1	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|332797889|ref|YP_004459389.1|	-	8.3e-09	35.4	3.5	1e-08	35.1	0.4	2.8	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|332797889|ref|YP_004459389.1|	-	0.0011	18.8	0.4	0.0037	17.2	0.3	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_4	PF04326.9	gi|332797889|ref|YP_004459389.1|	-	0.021	14.9	0.7	0.088	12.9	0.2	2.2	2	0	0	2	2	2	0	Divergent	AAA	domain
KH_2	PF07650.12	gi|332797889|ref|YP_004459389.1|	-	2	8.0	7.9	0.36	10.4	2.2	2.3	3	0	0	3	3	3	0	KH	domain
COXG	PF06240.8	gi|332797890|ref|YP_004459390.1|	-	7.2e-16	58.1	0.8	8.1e-16	57.9	0.6	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Neurexophilin	PF06312.7	gi|332797890|ref|YP_004459390.1|	-	0.085	12.0	0.2	0.089	12.0	0.1	1.1	1	0	0	1	1	1	0	Neurexophilin
COXG	PF06240.8	gi|332797891|ref|YP_004459391.1|	-	4.7e-35	120.3	1.1	5.2e-35	120.1	0.8	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DUF3211	PF11485.3	gi|332797891|ref|YP_004459391.1|	-	0.0066	16.4	0.1	0.0094	15.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
NTP_transf_3	PF12804.2	gi|332797892|ref|YP_004459392.1|	-	2.4e-37	128.4	0.0	3e-37	128.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|332797892|ref|YP_004459392.1|	-	6.3e-06	25.8	0.0	9.8e-06	25.2	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.14	gi|332797892|ref|YP_004459392.1|	-	0.00012	21.7	0.0	0.00021	21.0	0.0	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
CofC	PF01983.11	gi|332797892|ref|YP_004459392.1|	-	0.0035	16.3	0.1	0.0047	15.9	0.1	1.4	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
Fer2_2	PF01799.15	gi|332797893|ref|YP_004459393.1|	-	4.3e-36	122.6	0.7	2e-35	120.4	0.0	2.0	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|332797893|ref|YP_004459393.1|	-	2.8e-07	30.1	0.5	2.8e-07	30.1	0.3	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|332797893|ref|YP_004459393.1|	-	0.00016	21.5	1.0	0.00031	20.5	0.7	1.6	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|332797893|ref|YP_004459393.1|	-	0.27	11.0	1.8	2.1	8.1	1.2	2.2	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
FAD_binding_5	PF00941.16	gi|332797894|ref|YP_004459394.1|	-	6.5e-47	159.1	0.0	8.5e-47	158.7	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|332797894|ref|YP_004459394.1|	-	1e-24	86.4	0.1	1.5e-24	85.8	0.1	1.3	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
FAD_binding_4	PF01565.18	gi|332797894|ref|YP_004459394.1|	-	0.063	12.7	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	FAD	binding	domain
YHS	PF04945.8	gi|332797895|ref|YP_004459395.1|	-	7.7e-16	57.6	2.6	8e-16	57.6	1.8	1.0	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|332797895|ref|YP_004459395.1|	-	3.6e-06	27.0	2.9	4.6e-06	26.6	2.0	1.1	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|332797895|ref|YP_004459395.1|	-	0.00015	21.3	0.9	0.00019	20.9	0.6	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2116	PF09889.4	gi|332797895|ref|YP_004459395.1|	-	0.069	12.9	0.2	0.18	11.5	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Baculo_IE-1	PF05290.6	gi|332797895|ref|YP_004459395.1|	-	0.11	12.2	2.1	0.11	12.2	1.4	1.0	1	0	0	1	1	1	0	Baculovirus	immediate-early	protein	(IE-0)
Kazal_2	PF07648.10	gi|332797895|ref|YP_004459395.1|	-	1.4	8.8	3.5	9.3	6.2	2.5	2.1	1	1	0	1	1	1	0	Kazal-type	serine	protease	inhibitor	domain
TP_methylase	PF00590.15	gi|332797896|ref|YP_004459396.1|	-	1.2e-45	155.7	0.0	1.4e-45	155.5	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Hydrolase_6	PF13344.1	gi|332797896|ref|YP_004459396.1|	-	0.019	14.8	0.1	0.13	12.1	0.0	2.3	3	0	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
DUF1404	PF07185.6	gi|332797897|ref|YP_004459397.1|	-	3.7e-06	26.6	15.3	4.5e-06	26.3	10.2	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
DUF1212	PF06738.7	gi|332797897|ref|YP_004459397.1|	-	0.18	11.2	2.6	0.33	10.4	1.8	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
PalH	PF08733.5	gi|332797897|ref|YP_004459397.1|	-	1.6	7.4	8.6	0.18	10.5	2.3	1.8	2	0	0	2	2	2	0	PalH/RIM21
DUF1949	PF09186.6	gi|332797898|ref|YP_004459398.1|	-	0.047	13.2	0.0	0.066	12.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1949)
SIS	PF01380.17	gi|332797899|ref|YP_004459399.1|	-	2e-17	63.0	0.1	9.3e-08	31.7	0.0	2.7	2	1	0	2	2	2	2	SIS	domain
Peptidase_C11	PF03415.9	gi|332797899|ref|YP_004459399.1|	-	0.039	12.9	0.0	0.051	12.5	0.0	1.1	1	0	0	1	1	1	0	Clostripain	family
DUF4556	PF15094.1	gi|332797899|ref|YP_004459399.1|	-	0.18	11.3	0.0	0.27	10.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4556)
Amidohydro_5	PF13594.1	gi|332797900|ref|YP_004459400.1|	-	1.5e-05	24.6	0.0	3.2e-05	23.6	0.0	1.6	1	0	0	1	1	1	1	Amidohydrolase
PTH2	PF01981.11	gi|332797900|ref|YP_004459400.1|	-	0.0076	15.9	0.0	0.013	15.1	0.0	1.4	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Amidohydro_1	PF01979.15	gi|332797900|ref|YP_004459400.1|	-	0.15	11.6	0.0	0.73	9.4	0.0	1.7	1	1	0	2	2	2	0	Amidohydrolase	family
Met_10	PF02475.11	gi|332797901|ref|YP_004459401.1|	-	1.3e-51	175.0	0.0	1.6e-51	174.7	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
PrmA	PF06325.8	gi|332797901|ref|YP_004459401.1|	-	3.3e-05	23.1	0.0	4.4e-05	22.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|332797901|ref|YP_004459401.1|	-	0.0043	16.4	0.0	0.0059	15.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|332797901|ref|YP_004459401.1|	-	0.015	15.2	0.0	0.03	14.3	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332797901|ref|YP_004459401.1|	-	0.069	12.7	0.0	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Gln-synt_C	PF00120.19	gi|332797902|ref|YP_004459402.1|	-	1e-55	188.7	0.0	1.2e-55	188.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|332797902|ref|YP_004459402.1|	-	0.018	14.6	0.1	0.15	11.6	0.0	2.3	1	1	0	1	1	1	0	Glutamine	synthetase,	beta-Grasp	domain
ADH_N	PF08240.7	gi|332797903|ref|YP_004459403.1|	-	3.9e-31	107.0	0.2	5.7e-31	106.5	0.1	1.2	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|332797903|ref|YP_004459403.1|	-	1.7e-17	63.2	0.0	2.8e-17	62.4	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|332797903|ref|YP_004459403.1|	-	1.8e-11	45.0	0.0	2.9e-11	44.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|332797903|ref|YP_004459403.1|	-	0.00018	21.5	0.1	0.0004	20.3	0.1	1.6	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|332797903|ref|YP_004459403.1|	-	0.00024	20.7	0.0	0.00041	19.9	0.0	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_10	PF13460.1	gi|332797903|ref|YP_004459403.1|	-	0.0013	18.8	0.1	0.002	18.1	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
Shikimate_DH	PF01488.15	gi|332797903|ref|YP_004459403.1|	-	0.01	15.9	0.1	0.017	15.2	0.1	1.3	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox_3	PF13738.1	gi|332797903|ref|YP_004459403.1|	-	0.056	13.4	0.0	0.083	12.9	0.0	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_7	PF13241.1	gi|332797903|ref|YP_004459403.1|	-	0.058	13.6	0.0	0.1	12.8	0.0	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|332797903|ref|YP_004459403.1|	-	0.11	12.0	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
RTC	PF01137.16	gi|332797904|ref|YP_004459404.1|	-	3.6e-76	254.9	0.3	4.2e-76	254.7	0.2	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|332797904|ref|YP_004459404.1|	-	1.5e-26	92.4	0.5	5.2e-26	90.6	0.4	1.8	2	0	0	2	2	2	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
IMS	PF00817.15	gi|332797906|ref|YP_004459406.1|	-	1.6e-45	154.5	0.3	7.2e-45	152.4	0.0	2.0	2	1	1	3	3	3	1	impB/mucB/samB	family
IMS_C	PF11799.3	gi|332797906|ref|YP_004459406.1|	-	2e-06	27.7	0.0	4.7e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	impB/mucB/samB	family	C-terminal	domain
IMS_HHH	PF11798.3	gi|332797906|ref|YP_004459406.1|	-	3.8e-06	26.6	0.0	1.4e-05	24.8	0.0	2.1	1	0	0	1	1	1	1	IMS	family	HHH	motif
PfkB	PF00294.19	gi|332797907|ref|YP_004459407.1|	-	7.7e-35	120.4	0.2	3.2e-34	118.4	0.2	1.9	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Orthopox_F8	PF05886.6	gi|332797907|ref|YP_004459407.1|	-	0.033	14.0	0.1	0.073	12.9	0.0	1.6	1	0	0	1	1	1	0	Orthopoxvirus	F8	protein
TIP49	PF06068.8	gi|332797908|ref|YP_004459408.1|	-	1.2e-158	528.0	3.0	1.4e-158	527.7	2.1	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|332797908|ref|YP_004459408.1|	-	9.9e-12	45.2	1.6	5.7e-08	33.0	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|332797908|ref|YP_004459408.1|	-	4e-10	39.1	2.8	2.1e-06	26.9	0.1	3.2	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|332797908|ref|YP_004459408.1|	-	1.9e-07	31.2	0.2	0.0021	18.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|332797908|ref|YP_004459408.1|	-	2e-07	31.2	2.4	2.8e-06	27.4	0.4	2.5	2	1	0	2	2	1	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|332797908|ref|YP_004459408.1|	-	9.4e-06	25.3	0.4	0.00023	20.9	0.1	2.5	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|332797908|ref|YP_004459408.1|	-	8.4e-05	23.3	1.1	0.00029	21.6	0.0	2.5	2	2	0	2	2	2	1	AAA	domain
Sigma54_activat	PF00158.21	gi|332797908|ref|YP_004459408.1|	-	0.00012	21.6	0.2	0.001	18.6	0.1	2.2	2	0	0	2	2	2	1	Sigma-54	interaction	domain
IstB_IS21	PF01695.12	gi|332797908|ref|YP_004459408.1|	-	0.00017	21.0	0.1	0.00037	19.9	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_2	PF07724.9	gi|332797908|ref|YP_004459408.1|	-	0.00028	20.8	0.1	0.00085	19.2	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
Mg_chelatase	PF01078.16	gi|332797908|ref|YP_004459408.1|	-	0.00059	19.0	0.9	0.0035	16.5	0.2	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.1	gi|332797908|ref|YP_004459408.1|	-	0.00073	18.9	0.6	0.0027	17.1	0.3	2.1	2	1	1	3	3	2	1	AAA	domain
ABC_tran	PF00005.22	gi|332797908|ref|YP_004459408.1|	-	0.0011	19.2	0.1	0.0026	18.0	0.1	1.6	1	0	0	1	1	1	1	ABC	transporter
AAA_18	PF13238.1	gi|332797908|ref|YP_004459408.1|	-	0.0016	18.7	0.4	0.0052	17.0	0.0	2.2	2	0	0	2	2	1	1	AAA	domain
AAA_19	PF13245.1	gi|332797908|ref|YP_004459408.1|	-	0.0019	17.9	0.1	0.0049	16.5	0.1	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
DBI_PRT	PF02277.12	gi|332797908|ref|YP_004459408.1|	-	0.0022	17.1	1.1	0.0034	16.5	0.8	1.2	1	0	0	1	1	1	1	Phosphoribosyltransferase
AAA_33	PF13671.1	gi|332797908|ref|YP_004459408.1|	-	0.0029	17.5	0.0	0.0058	16.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.11	gi|332797908|ref|YP_004459408.1|	-	0.0044	16.2	0.3	0.0092	15.2	0.2	1.5	1	0	0	1	1	1	1	PhoH-like	protein
AAA_14	PF13173.1	gi|332797908|ref|YP_004459408.1|	-	0.0054	16.6	0.1	0.24	11.3	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|332797908|ref|YP_004459408.1|	-	0.0063	15.6	0.1	0.012	14.7	0.1	1.4	1	0	0	1	1	1	1	Zeta	toxin
DUF815	PF05673.8	gi|332797908|ref|YP_004459408.1|	-	0.0071	15.2	0.1	0.015	14.2	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.7	gi|332797908|ref|YP_004459408.1|	-	0.013	15.1	0.0	0.027	14.1	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
Histone	PF00125.19	gi|332797908|ref|YP_004459408.1|	-	0.016	15.2	0.0	0.25	11.4	0.0	2.4	2	0	0	2	2	2	0	Core	histone	H2A/H2B/H3/H4
Rad17	PF03215.10	gi|332797908|ref|YP_004459408.1|	-	0.023	13.3	0.0	0.035	12.8	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
Arch_ATPase	PF01637.13	gi|332797908|ref|YP_004459408.1|	-	0.024	14.3	3.6	0.28	10.8	1.9	2.7	1	1	0	1	1	1	0	Archaeal	ATPase
T2SE	PF00437.15	gi|332797908|ref|YP_004459408.1|	-	0.028	13.3	2.4	0.23	10.3	0.1	2.3	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
DUF2075	PF09848.4	gi|332797908|ref|YP_004459408.1|	-	0.028	13.3	0.1	0.041	12.8	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
UPF0079	PF02367.12	gi|332797908|ref|YP_004459408.1|	-	0.029	13.9	0.3	0.064	12.8	0.2	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
ResIII	PF04851.10	gi|332797908|ref|YP_004459408.1|	-	0.029	14.1	0.7	0.22	11.3	0.0	2.3	3	0	0	3	3	2	0	Type	III	restriction	enzyme,	res	subunit
RNA_helicase	PF00910.17	gi|332797908|ref|YP_004459408.1|	-	0.029	14.5	0.0	0.062	13.4	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
PepSY	PF03413.14	gi|332797908|ref|YP_004459408.1|	-	0.031	14.9	0.4	17	6.1	0.0	2.7	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
DNA_pol3_delta2	PF13177.1	gi|332797908|ref|YP_004459408.1|	-	0.032	13.8	0.0	0.18	11.4	0.0	2.2	2	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
AAA_29	PF13555.1	gi|332797908|ref|YP_004459408.1|	-	0.036	13.5	0.2	0.073	12.6	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_28	PF13521.1	gi|332797908|ref|YP_004459408.1|	-	0.065	13.1	0.3	0.3	11.0	0.1	2.2	2	1	1	3	3	2	0	AAA	domain
IPT	PF01745.11	gi|332797908|ref|YP_004459408.1|	-	0.069	12.3	0.1	0.14	11.3	0.1	1.4	1	0	0	1	1	1	0	Isopentenyl	transferase
MobB	PF03205.9	gi|332797908|ref|YP_004459408.1|	-	0.084	12.5	0.3	0.25	11.0	0.0	1.9	2	0	0	2	2	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NUDIX	PF00293.23	gi|332797909|ref|YP_004459409.1|	-	5.8e-19	68.0	0.0	8.2e-19	67.5	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|332797909|ref|YP_004459409.1|	-	0.012	14.9	0.0	0.019	14.3	0.0	1.5	1	1	0	1	1	1	0	NUDIX	domain
FAD_binding_2	PF00890.19	gi|332797910|ref|YP_004459410.1|	-	1.3e-74	251.5	0.0	1.6e-74	251.2	0.0	1.0	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|332797910|ref|YP_004459410.1|	-	3.1e-14	52.9	0.0	2.2e-12	46.9	0.0	2.4	1	1	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|332797910|ref|YP_004459410.1|	-	1.6e-13	50.3	0.9	9.6e-06	24.7	0.4	2.2	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332797910|ref|YP_004459410.1|	-	1.2e-12	48.1	0.3	3.2e-11	43.4	0.1	3.0	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|332797910|ref|YP_004459410.1|	-	7.5e-10	38.2	2.5	3.5e-05	22.8	0.0	3.0	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|332797910|ref|YP_004459410.1|	-	3.5e-08	32.3	0.6	0.00028	19.4	0.0	2.9	3	0	0	3	3	3	2	HI0933-like	protein
NAD_binding_9	PF13454.1	gi|332797910|ref|YP_004459410.1|	-	6.4e-05	22.7	0.0	0.21	11.3	0.0	3.2	3	0	0	3	3	3	2	FAD-NAD(P)-binding
NAD_binding_8	PF13450.1	gi|332797910|ref|YP_004459410.1|	-	0.0011	18.9	1.2	0.003	17.5	0.9	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|332797910|ref|YP_004459410.1|	-	0.0055	15.8	0.9	0.01	14.9	0.6	1.4	1	0	0	1	1	1	1	Thi4	family
Pyr_redox	PF00070.22	gi|332797910|ref|YP_004459410.1|	-	0.031	14.6	0.4	1.1	9.6	0.1	2.5	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Imm43	PF15602.1	gi|332797910|ref|YP_004459410.1|	-	0.044	13.7	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	Immunity	protein	43
Pyr_redox_3	PF13738.1	gi|332797910|ref|YP_004459410.1|	-	0.05	13.6	0.1	0.63	10.0	0.1	2.2	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|332797910|ref|YP_004459410.1|	-	0.12	11.4	0.0	1.7	7.6	0.0	2.4	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
FAD_binding_3	PF01494.14	gi|332797910|ref|YP_004459410.1|	-	0.2	10.6	0.5	0.32	10.0	0.4	1.3	1	0	0	1	1	1	0	FAD	binding	domain
SBP_bac_11	PF13531.1	gi|332797911|ref|YP_004459411.1|	-	1.4e-09	37.9	0.0	2e-09	37.4	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
NMT1	PF09084.6	gi|332797911|ref|YP_004459411.1|	-	0.051	13.1	0.0	0.074	12.6	0.0	1.3	1	0	0	1	1	1	0	NMT1/THI5	like
Acetyltransf_7	PF13508.1	gi|332797911|ref|YP_004459411.1|	-	0.086	13.0	0.0	0.19	11.9	0.0	1.5	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF3834	PF12916.2	gi|332797912|ref|YP_004459412.1|	-	2.5e-75	251.9	1.2	2.9e-75	251.7	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
SBP_bac_3	PF00497.15	gi|332797912|ref|YP_004459412.1|	-	0.036	13.3	0.1	0.078	12.2	0.0	1.7	1	1	1	2	2	2	0	Bacterial	extracellular	solute-binding	proteins,	family	3
BAR_2	PF10455.4	gi|332797912|ref|YP_004459412.1|	-	0.089	11.6	0.6	5	5.9	0.0	2.1	1	1	1	2	2	2	0	Bin/amphiphysin/Rvs	domain	for	vesicular	trafficking
MFS_1	PF07690.11	gi|332797913|ref|YP_004459413.1|	-	2e-31	109.0	42.3	5.3e-19	68.1	16.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|332797913|ref|YP_004459413.1|	-	6.9e-07	27.7	1.2	6.9e-07	27.7	0.8	1.9	2	0	0	2	2	2	1	Transmembrane	secretion	effector
RNase_Zc3h12a_2	PF14626.1	gi|332797914|ref|YP_004459414.1|	-	0.026	14.3	0.2	0.047	13.5	0.1	1.5	1	0	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
MS_channel	PF00924.13	gi|332797915|ref|YP_004459415.1|	-	9.2e-22	77.3	4.4	9.2e-22	77.3	3.1	1.6	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Rhomboid	PF01694.17	gi|332797915|ref|YP_004459415.1|	-	1.2	9.1	11.6	2.3	8.2	8.1	1.4	1	0	0	1	1	1	0	Rhomboid	family
OsmC	PF02566.14	gi|332797916|ref|YP_004459416.1|	-	0.024	14.8	0.0	0.031	14.4	0.0	1.2	1	0	0	1	1	1	0	OsmC-like	protein
NPCBM_assoc	PF10633.4	gi|332797917|ref|YP_004459417.1|	-	1.6e-12	47.2	1.7	0.013	15.4	0.0	7.3	8	1	0	8	8	8	3	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.6	gi|332797917|ref|YP_004459417.1|	-	9.1e-07	28.8	19.7	0.12	12.4	0.2	5.3	4	1	0	5	5	5	4	CARDB
TRAP_beta	PF05753.9	gi|332797917|ref|YP_004459417.1|	-	0.018	14.2	15.8	0.059	12.5	0.3	5.1	6	1	1	7	7	7	0	Translocon-associated	protein	beta	(TRAPB)
Big_3	PF07523.7	gi|332797917|ref|YP_004459417.1|	-	0.031	14.3	0.4	0.2	11.7	0.0	2.6	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	3)
DUF824	PF05688.6	gi|332797917|ref|YP_004459417.1|	-	0.058	13.0	0.2	25	4.6	0.0	3.8	4	0	0	4	4	4	0	Salmonella	repeat	of	unknown	function	(DUF824)
DUF11	PF01345.13	gi|332797917|ref|YP_004459417.1|	-	4.1	7.5	21.8	1.3	9.1	0.3	5.1	5	0	0	5	5	5	0	Domain	of	unknown	function	DUF11
HTH_24	PF13412.1	gi|332797918|ref|YP_004459418.1|	-	1.5e-06	27.4	0.6	4.4e-06	25.9	0.4	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|332797918|ref|YP_004459418.1|	-	2.8e-06	26.9	0.3	5.2e-06	26.0	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|332797918|ref|YP_004459418.1|	-	1.3e-05	24.7	0.0	2.3e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_8	PF02954.14	gi|332797918|ref|YP_004459418.1|	-	0.00039	19.8	0.1	0.00066	19.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
HTH_AsnC-type	PF13404.1	gi|332797918|ref|YP_004459418.1|	-	0.00071	19.0	0.1	0.0025	17.3	0.1	1.9	2	1	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_28	PF13518.1	gi|332797918|ref|YP_004459418.1|	-	0.0012	18.7	0.0	0.0021	18.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|332797918|ref|YP_004459418.1|	-	0.0029	17.3	0.0	0.0052	16.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
FUR	PF01475.14	gi|332797918|ref|YP_004459418.1|	-	0.015	15.2	0.4	0.041	13.8	0.0	1.8	1	1	1	2	2	2	0	Ferric	uptake	regulator	family
HTH_36	PF13730.1	gi|332797918|ref|YP_004459418.1|	-	0.015	15.4	0.1	0.045	13.8	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_43	PF09904.4	gi|332797918|ref|YP_004459418.1|	-	0.022	14.5	0.0	0.043	13.6	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
eIF2A	PF08662.6	gi|332797918|ref|YP_004459418.1|	-	0.023	14.4	0.5	0.11	12.1	0.2	2.0	2	0	0	2	2	2	0	Eukaryotic	translation	initiation	factor	eIF2A
DUF2375	PF09558.5	gi|332797918|ref|YP_004459418.1|	-	0.035	13.9	0.3	0.079	12.8	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2375)
MarR	PF01047.17	gi|332797918|ref|YP_004459418.1|	-	0.039	13.6	0.0	0.12	12.1	0.0	1.7	1	0	0	1	1	1	0	MarR	family
HTH_6	PF01418.12	gi|332797918|ref|YP_004459418.1|	-	0.042	13.5	0.1	0.075	12.7	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
MarR_2	PF12802.2	gi|332797918|ref|YP_004459418.1|	-	0.069	12.8	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	MarR	family
Frizzled	PF01534.12	gi|332797918|ref|YP_004459418.1|	-	0.07	11.9	1.2	0.11	11.2	0.0	1.7	2	0	0	2	2	2	0	Frizzled/Smoothened	family	membrane	region
HTH_29	PF13551.1	gi|332797918|ref|YP_004459418.1|	-	0.089	12.9	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_23	PF13384.1	gi|332797918|ref|YP_004459418.1|	-	0.095	12.3	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
PaREP1	PF05942.6	gi|332797919|ref|YP_004459419.1|	-	0.0025	17.6	0.1	0.0091	15.8	0.1	1.9	1	1	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
AA_permease_2	PF13520.1	gi|332797920|ref|YP_004459420.1|	-	1.3e-05	23.9	61.6	0.00025	19.7	42.7	2.2	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|332797920|ref|YP_004459420.1|	-	4.5e-05	21.9	58.5	0.0011	17.4	40.6	2.2	1	1	0	1	1	1	1	Amino	acid	permease
Git3_C	PF11970.3	gi|332797921|ref|YP_004459421.1|	-	0.51	10.1	3.6	1.2	8.9	2.5	1.6	1	0	0	1	1	1	0	G	protein-coupled	glucose	receptor	regulating	Gpa2	C-term
DUF4389	PF14333.1	gi|332797921|ref|YP_004459421.1|	-	8.6	6.1	8.8	8.2	6.2	0.9	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4389)
AAA_assoc_C	PF09821.4	gi|332797922|ref|YP_004459422.1|	-	8.9e-35	119.5	0.0	1.3e-34	119.0	0.0	1.2	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
RE_AlwI	PF09491.5	gi|332797922|ref|YP_004459422.1|	-	0.01	14.3	0.0	0.013	13.9	0.0	1.1	1	0	0	1	1	1	0	AlwI	restriction	endonuclease
Telomere_Sde2_2	PF13297.1	gi|332797922|ref|YP_004459422.1|	-	0.014	14.6	0.0	0.027	13.7	0.0	1.4	1	0	0	1	1	1	0	Telomere	stability	C-terminal
DUF956	PF06115.6	gi|332797922|ref|YP_004459422.1|	-	0.028	14.0	0.0	0.04	13.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF956)
Glyco_hydro_80	PF13647.1	gi|332797922|ref|YP_004459422.1|	-	0.14	11.4	0.0	0.18	11.0	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	80	of	chitosanase	A
VIT1	PF01988.14	gi|332797923|ref|YP_004459423.1|	-	2.9e-51	173.9	2.5	3.3e-51	173.8	1.7	1.0	1	0	0	1	1	1	1	VIT	family
Lactamase_B_2	PF12706.2	gi|332797924|ref|YP_004459424.1|	-	1.8e-07	30.8	0.1	2.4e-07	30.5	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|332797924|ref|YP_004459424.1|	-	2.9e-06	27.1	0.1	4.8e-06	26.3	0.1	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|332797924|ref|YP_004459424.1|	-	1.2e-05	25.0	0.5	0.00016	21.3	0.1	2.1	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Methyltransf_31	PF13847.1	gi|332797924|ref|YP_004459424.1|	-	0.039	13.5	0.1	0.087	12.4	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	domain
DHH	PF01368.15	gi|332797924|ref|YP_004459424.1|	-	0.066	12.8	8.5	0.013	15.1	0.7	2.5	1	1	1	2	2	2	0	DHH	family
SseB_C	PF14581.1	gi|332797924|ref|YP_004459424.1|	-	0.082	12.7	0.0	2.5	7.9	0.0	2.6	1	1	1	2	2	2	0	SseB	protein	C-terminal	domain
ResIII	PF04851.10	gi|332797925|ref|YP_004459425.1|	-	1.3e-24	87.0	0.8	5.1e-23	81.8	0.0	3.0	2	2	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|332797925|ref|YP_004459425.1|	-	1.3e-17	63.4	0.2	4.7e-17	61.6	0.0	2.1	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|332797925|ref|YP_004459425.1|	-	4.2e-14	52.0	1.7	2.9e-08	32.8	0.0	3.7	1	1	2	3	3	3	2	SNF2	family	N-terminal	domain
DEAD	PF00270.24	gi|332797925|ref|YP_004459425.1|	-	1.1e-12	47.8	0.0	6.7e-12	45.2	0.0	2.2	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C_2	PF13307.1	gi|332797925|ref|YP_004459425.1|	-	4.7e-05	23.4	0.2	0.028	14.3	0.0	3.6	4	0	0	4	4	4	1	Helicase	C-terminal	domain
FTA4	PF13093.1	gi|332797925|ref|YP_004459425.1|	-	0.044	13.2	3.8	0.11	11.8	2.7	1.7	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
DUF2075	PF09848.4	gi|332797925|ref|YP_004459425.1|	-	0.084	11.8	0.0	0.26	10.2	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
DUF790	PF05626.6	gi|332797926|ref|YP_004459426.1|	-	3.6e-116	387.7	11.8	5.1e-116	387.3	8.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
DUF651	PF04895.7	gi|332797926|ref|YP_004459426.1|	-	0.022	14.4	0.3	0.64	9.6	0.0	2.7	2	0	0	2	2	2	0	Archaeal	protein	of	unknown	function	(DUF651)
HTH_11	PF08279.7	gi|332797926|ref|YP_004459426.1|	-	0.042	13.5	0.1	0.15	11.7	0.0	2.0	1	0	0	1	1	1	0	HTH	domain
HAD_2	PF13419.1	gi|332797927|ref|YP_004459427.1|	-	1.1e-14	55.0	0.0	1.4e-14	54.6	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|332797927|ref|YP_004459427.1|	-	3.5e-11	43.9	0.0	4.2e-11	43.6	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|332797927|ref|YP_004459427.1|	-	7.7e-06	25.5	0.0	1.9e-05	24.2	0.0	1.7	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|332797927|ref|YP_004459427.1|	-	0.0018	18.4	0.0	0.0025	17.9	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF4322	PF14210.1	gi|332797927|ref|YP_004459427.1|	-	0.24	10.9	1.2	15	5.1	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4322)
Radical_SAM	PF04055.16	gi|332797928|ref|YP_004459428.1|	-	2.3e-19	70.1	0.1	1.8e-18	67.2	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|332797928|ref|YP_004459428.1|	-	4.1e-05	23.4	0.0	0.0001	22.1	0.0	1.6	1	1	0	1	1	1	1	B12	binding	domain
Fer4_14	PF13394.1	gi|332797928|ref|YP_004459428.1|	-	0.13	12.2	0.0	20	5.2	0.0	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
7kD_DNA_binding	PF02294.13	gi|332797929|ref|YP_004459429.1|	-	1.2e-39	133.8	5.9	1.3e-39	133.6	4.1	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
DUF2960	PF11173.3	gi|332797929|ref|YP_004459429.1|	-	0.056	13.7	0.3	0.2	11.9	0.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2960)
ATP-cone	PF03477.11	gi|332797930|ref|YP_004459430.1|	-	2.9e-06	27.6	0.9	3.5e-06	27.3	0.6	1.1	1	0	0	1	1	1	1	ATP	cone	domain
Sigma70_r4_2	PF08281.7	gi|332797931|ref|YP_004459431.1|	-	0.00041	19.7	0.1	0.00041	19.7	0.1	1.6	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_3	PF01381.17	gi|332797931|ref|YP_004459431.1|	-	0.0011	18.7	0.2	0.0022	17.7	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_37	PF13744.1	gi|332797931|ref|YP_004459431.1|	-	0.0019	17.9	0.1	0.0027	17.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|332797931|ref|YP_004459431.1|	-	0.0029	16.9	0.4	0.0088	15.4	0.0	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
GerE	PF00196.14	gi|332797931|ref|YP_004459431.1|	-	0.012	14.9	0.0	0.019	14.2	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_31	PF13560.1	gi|332797931|ref|YP_004459431.1|	-	0.02	15.0	0.0	0.03	14.5	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|332797931|ref|YP_004459431.1|	-	0.026	14.0	0.0	0.038	13.5	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|332797931|ref|YP_004459431.1|	-	0.026	14.0	0.0	0.034	13.6	0.0	1.2	1	0	0	1	1	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_28	PF13518.1	gi|332797931|ref|YP_004459431.1|	-	0.035	14.1	0.1	0.072	13.1	0.1	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
Skp1	PF01466.14	gi|332797931|ref|YP_004459431.1|	-	0.13	12.2	0.0	2	8.5	0.0	2.0	1	1	0	2	2	2	0	Skp1	family,	dimerisation	domain
Acetyltransf_1	PF00583.19	gi|332797932|ref|YP_004459432.1|	-	2.8e-13	49.7	0.0	4e-13	49.2	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|332797932|ref|YP_004459432.1|	-	6.4e-12	45.8	0.0	8.1e-12	45.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|332797932|ref|YP_004459432.1|	-	6.1e-09	35.5	0.0	8.9e-09	34.9	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_10	PF13673.1	gi|332797932|ref|YP_004459432.1|	-	6.3e-09	35.9	0.0	7.4e-09	35.7	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|332797932|ref|YP_004459432.1|	-	9.9e-06	25.6	0.0	1.5e-05	25.0	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|332797932|ref|YP_004459432.1|	-	1.2e-05	25.3	0.0	2.9e-05	24.0	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|332797932|ref|YP_004459432.1|	-	0.00053	19.8	0.0	0.00077	19.3	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|332797932|ref|YP_004459432.1|	-	0.0038	17.0	0.0	0.006	16.4	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_9	PF13527.1	gi|332797932|ref|YP_004459432.1|	-	0.0066	16.3	0.0	0.06	13.1	0.0	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.1	gi|332797932|ref|YP_004459432.1|	-	0.089	12.7	0.0	0.14	12.1	0.0	1.2	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DUF240	PF03086.9	gi|332797932|ref|YP_004459432.1|	-	0.14	11.8	0.2	0.32	10.6	0.0	1.6	2	0	0	2	2	2	0	MG032/MG096/MG288	family	2
Acetyltransf_13	PF13880.1	gi|332797932|ref|YP_004459432.1|	-	0.15	11.8	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
PK	PF00224.16	gi|332797933|ref|YP_004459433.1|	-	4.6e-86	288.5	2.5	6.7e-86	288.0	1.7	1.2	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|332797933|ref|YP_004459433.1|	-	6.6e-26	90.1	0.0	2.1e-25	88.5	0.0	1.9	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|332797933|ref|YP_004459433.1|	-	0.00027	19.9	0.0	0.0007	18.5	0.0	1.6	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
Fer4_14	PF13394.1	gi|332797933|ref|YP_004459433.1|	-	0.019	14.9	0.0	0.049	13.6	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|332797933|ref|YP_004459433.1|	-	0.031	14.4	0.4	4.2	7.5	0.0	3.4	3	1	0	3	3	3	0	Radical	SAM	superfamily
CNF1	PF05785.7	gi|332797933|ref|YP_004459433.1|	-	0.13	11.1	0.3	0.23	10.3	0.2	1.3	1	0	0	1	1	1	0	Rho-activating	domain	of	cytotoxic	necrotizing	factor
DUF1955	PF09205.5	gi|332797934|ref|YP_004459434.1|	-	5.5e-56	188.5	9.3	6.2e-56	188.3	6.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
PPR	PF01535.15	gi|332797934|ref|YP_004459434.1|	-	0.038	13.9	0.5	10	6.3	0.0	3.5	3	0	0	3	3	3	0	PPR	repeat
TPR_2	PF07719.12	gi|332797934|ref|YP_004459434.1|	-	0.12	12.3	1.1	0.31	11.0	0.3	2.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DAO	PF01266.19	gi|332797935|ref|YP_004459435.1|	-	2e-36	125.6	0.0	2.5e-36	125.3	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|332797935|ref|YP_004459435.1|	-	1.6e-07	31.2	0.0	3.4e-07	30.2	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|332797935|ref|YP_004459435.1|	-	0.00039	19.1	0.1	0.0026	16.4	0.0	2.0	2	0	0	2	2	2	1	Tryptophan	halogenase
FAD_binding_3	PF01494.14	gi|332797935|ref|YP_004459435.1|	-	0.00058	19.0	0.0	0.00082	18.5	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|332797935|ref|YP_004459435.1|	-	0.0009	19.6	0.3	0.0024	18.2	0.1	1.8	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|332797935|ref|YP_004459435.1|	-	0.002	18.0	0.1	0.0038	17.1	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|332797935|ref|YP_004459435.1|	-	0.0058	15.7	0.1	0.0094	15.0	0.0	1.3	1	0	0	1	1	1	1	Thi4	family
FAD_binding_2	PF00890.19	gi|332797935|ref|YP_004459435.1|	-	0.016	14.0	0.0	0.024	13.5	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
HI0933_like	PF03486.9	gi|332797935|ref|YP_004459435.1|	-	0.023	13.1	0.1	0.038	12.4	0.1	1.3	1	0	0	1	1	1	0	HI0933-like	protein
DUF3390	PF11870.3	gi|332797935|ref|YP_004459435.1|	-	0.029	14.2	0.3	1.5	8.8	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3390)
ApbA	PF02558.11	gi|332797935|ref|YP_004459435.1|	-	0.031	13.7	0.0	0.054	12.9	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_9	PF13454.1	gi|332797935|ref|YP_004459435.1|	-	0.031	14.0	0.0	0.094	12.4	0.0	1.7	2	0	0	2	2	2	0	FAD-NAD(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|332797935|ref|YP_004459435.1|	-	0.046	13.1	0.0	0.076	12.3	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Flavodoxin_5	PF12724.2	gi|332797935|ref|YP_004459435.1|	-	0.072	13.0	0.0	0.49	10.3	0.0	2.1	1	1	1	2	2	2	0	Flavodoxin	domain
Pyr_redox_3	PF13738.1	gi|332797935|ref|YP_004459435.1|	-	0.14	12.2	0.0	0.21	11.6	0.0	1.4	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Cnd1	PF12717.2	gi|332797936|ref|YP_004459436.1|	-	0.088	12.6	0.0	1.5	8.6	0.0	2.2	1	1	1	2	2	2	0	non-SMC	mitotic	condensation	complex	subunit	1
ThiS	PF02597.15	gi|332797937|ref|YP_004459437.1|	-	2e-06	28.1	0.0	2.3e-06	27.9	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.1	gi|332797937|ref|YP_004459437.1|	-	0.0005	19.8	0.2	0.00079	19.2	0.1	1.2	1	0	0	1	1	1	1	ThiS-like	ubiquitin
Glycos_transf_1	PF00534.15	gi|332797939|ref|YP_004459439.1|	-	3.8e-31	107.8	0.0	6.5e-31	107.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|332797939|ref|YP_004459439.1|	-	1.6e-28	99.8	0.0	2.5e-28	99.2	0.0	1.2	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glyco_trans_1_4	PF13692.1	gi|332797939|ref|YP_004459439.1|	-	2.2e-11	44.0	0.0	4.2e-11	43.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|332797939|ref|YP_004459439.1|	-	2.4e-05	24.5	0.0	7.1e-05	22.9	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|332797939|ref|YP_004459439.1|	-	0.0023	18.1	0.0	0.042	14.1	0.0	2.3	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|332797939|ref|YP_004459439.1|	-	0.019	14.6	0.0	0.13	12.0	0.0	2.1	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
Glyco_hydro_57	PF03065.10	gi|332797940|ref|YP_004459440.1|	-	3.6e-74	249.8	3.3	2.3e-73	247.2	2.3	2.0	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
NTP_transferase	PF00483.18	gi|332797941|ref|YP_004459441.1|	-	3.6e-39	134.5	0.0	4.6e-39	134.1	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|332797941|ref|YP_004459441.1|	-	2.2e-09	36.3	16.8	0.0015	17.9	0.4	4.4	1	1	3	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.7	gi|332797941|ref|YP_004459441.1|	-	0.00041	19.0	0.4	0.13	10.7	0.9	2.2	1	1	1	2	2	2	2	L-fucokinase
Hexapep_2	PF14602.1	gi|332797941|ref|YP_004459441.1|	-	0.11	12.0	9.6	2.4	7.8	0.3	4.0	2	1	1	3	3	3	0	Hexapeptide	repeat	of	succinyl-transferase
HET-s_218-289	PF11558.3	gi|332797941|ref|YP_004459441.1|	-	0.2	11.6	3.4	0.37	10.7	1.5	2.0	2	0	0	2	2	2	0	Het-s	218-289
Glyco_hydro_15	PF00723.16	gi|332797942|ref|YP_004459442.1|	-	3.5e-13	48.9	1.7	6.5e-08	31.5	1.5	3.6	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
TPR_19	PF14559.1	gi|332797942|ref|YP_004459442.1|	-	0.042	14.1	0.0	0.087	13.1	0.0	1.5	1	0	0	1	1	1	0	Tetratricopeptide	repeat
GDE_C	PF06202.9	gi|332797943|ref|YP_004459443.1|	-	1.3e-112	376.1	0.0	1.9e-112	375.6	0.0	1.2	1	0	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
GDE_N	PF12439.3	gi|332797943|ref|YP_004459443.1|	-	5.3e-51	172.9	0.1	8.4e-51	172.3	0.1	1.3	1	0	0	1	1	1	1	Glycogen	debranching	enzyme	N	terminal
DUF608	PF04685.8	gi|332797943|ref|YP_004459443.1|	-	9.6e-07	27.8	0.0	1.5e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
Glyco_hydro_100	PF12899.2	gi|332797943|ref|YP_004459443.1|	-	0.038	12.3	1.0	0.37	9.1	0.0	2.6	2	1	0	2	2	2	0	Alkaline	and	neutral	invertase
AMP-binding_C_2	PF14535.1	gi|332797944|ref|YP_004459444.1|	-	1e-15	57.5	0.0	1.9e-15	56.6	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|332797944|ref|YP_004459444.1|	-	7.3e-05	21.3	0.1	0.00016	20.1	0.0	1.4	1	1	0	1	1	1	1	AMP-binding	enzyme
3HCDH_N	PF02737.13	gi|332797945|ref|YP_004459445.1|	-	6.7e-65	218.1	0.1	1e-64	217.5	0.1	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|332797945|ref|YP_004459445.1|	-	2.5e-50	168.8	0.0	7.9e-27	93.5	0.0	2.6	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|332797945|ref|YP_004459445.1|	-	0.00029	20.6	0.1	0.00075	19.2	0.0	1.6	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Pyr_redox	PF00070.22	gi|332797945|ref|YP_004459445.1|	-	0.0019	18.5	0.0	0.0042	17.4	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.10	gi|332797945|ref|YP_004459445.1|	-	0.0029	17.4	0.0	0.0057	16.5	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|332797945|ref|YP_004459445.1|	-	0.0062	16.9	0.0	0.016	15.6	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Methyltransf_31	PF13847.1	gi|332797945|ref|YP_004459445.1|	-	0.018	14.6	0.0	0.041	13.4	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
TrkA_N	PF02254.13	gi|332797945|ref|YP_004459445.1|	-	0.037	14.0	0.0	0.082	12.9	0.0	1.6	1	0	0	1	1	1	0	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.9	gi|332797945|ref|YP_004459445.1|	-	0.04	13.2	0.2	0.1	11.9	0.1	1.8	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|332797945|ref|YP_004459445.1|	-	0.096	12.7	0.0	0.3	11.1	0.0	1.8	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
AlaDh_PNT_C	PF01262.16	gi|332797945|ref|YP_004459445.1|	-	0.1	12.1	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ADH_zinc_N	PF00107.21	gi|332797946|ref|YP_004459446.1|	-	1.8e-32	111.6	0.2	3.2e-32	110.8	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|332797946|ref|YP_004459446.1|	-	4.5e-32	110.0	2.1	1.3e-31	108.5	1.4	1.8	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|332797946|ref|YP_004459446.1|	-	2.3e-07	31.7	0.0	1.1e-06	29.5	0.0	2.0	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ThiF	PF00899.16	gi|332797946|ref|YP_004459446.1|	-	0.0054	16.5	1.8	0.017	14.9	1.2	1.8	1	0	0	1	1	1	1	ThiF	family
TrkA_N	PF02254.13	gi|332797946|ref|YP_004459446.1|	-	0.0068	16.3	1.4	0.011	15.6	1.0	1.3	1	0	0	1	1	1	1	TrkA-N	domain
NAD_binding_3	PF03447.11	gi|332797946|ref|YP_004459446.1|	-	0.01	16.1	0.9	0.019	15.3	0.7	1.4	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|332797946|ref|YP_004459446.1|	-	0.02	13.8	0.3	0.026	13.5	0.2	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|332797946|ref|YP_004459446.1|	-	0.042	13.0	0.2	0.072	12.2	0.1	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|332797946|ref|YP_004459446.1|	-	0.076	13.1	0.4	0.14	12.2	0.2	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
KR	PF08659.5	gi|332797946|ref|YP_004459446.1|	-	0.081	12.5	0.1	0.13	11.8	0.1	1.3	1	0	0	1	1	1	0	KR	domain
Semialdhyde_dh	PF01118.19	gi|332797946|ref|YP_004459446.1|	-	1.3	9.3	4.9	0.37	11.1	0.3	2.2	2	0	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|332797946|ref|YP_004459446.1|	-	1.5	8.7	4.8	1.6	8.6	1.2	2.2	2	0	0	2	2	2	0	Dihydrodipicolinate	reductase,	N-terminus
CBS	PF00571.23	gi|332797947|ref|YP_004459447.1|	-	2.9e-35	119.7	1.0	3.2e-17	62.0	0.0	2.1	2	0	0	2	2	2	2	CBS	domain
Acetyltransf_10	PF13673.1	gi|332797947|ref|YP_004459447.1|	-	0.096	12.8	0.0	0.19	11.8	0.0	1.5	1	1	1	2	2	2	0	Acetyltransferase	(GNAT)	domain
zf-C2H2_3	PF13878.1	gi|332797950|ref|YP_004459450.1|	-	0.058	12.9	0.1	0.1	12.1	0.0	1.4	1	0	0	1	1	1	0	zinc-finger	of	acetyl-transferase	ESCO
Med4	PF10018.4	gi|332797950|ref|YP_004459450.1|	-	0.13	11.6	0.5	0.25	10.7	0.4	1.4	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
ADH_N	PF08240.7	gi|332797952|ref|YP_004459452.1|	-	4.2e-27	94.0	0.1	9.4e-27	92.9	0.1	1.6	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|332797952|ref|YP_004459452.1|	-	8.2e-25	86.8	0.7	1.6e-24	85.9	0.5	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|332797952|ref|YP_004459452.1|	-	5.4e-12	46.7	0.2	1.2e-11	45.6	0.1	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|332797952|ref|YP_004459452.1|	-	7.1e-06	26.1	1.7	1.1e-05	25.5	0.7	1.8	2	1	0	2	2	2	1	NADH(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|332797952|ref|YP_004459452.1|	-	0.00033	20.3	0.5	0.00086	19.0	0.3	1.7	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
CMAS	PF02353.15	gi|332797952|ref|YP_004459452.1|	-	0.00064	18.8	0.0	0.00096	18.3	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
AlaDh_PNT_C	PF01262.16	gi|332797952|ref|YP_004459452.1|	-	0.0067	16.0	0.6	0.017	14.6	0.4	1.8	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
adh_short	PF00106.20	gi|332797952|ref|YP_004459452.1|	-	0.011	15.7	0.1	0.017	15.0	0.1	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
E1-N	PF14463.1	gi|332797952|ref|YP_004459452.1|	-	0.011	15.3	0.1	0.023	14.2	0.1	1.6	1	0	0	1	1	1	0	E1	N-terminal	domain
ELFV_dehydrog	PF00208.16	gi|332797952|ref|YP_004459452.1|	-	0.034	13.7	0.2	0.054	13.0	0.1	1.4	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Epimerase	PF01370.16	gi|332797952|ref|YP_004459452.1|	-	0.041	13.3	0.1	0.063	12.7	0.1	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
2-Hacid_dh_C	PF02826.14	gi|332797952|ref|YP_004459452.1|	-	0.091	11.9	0.3	0.15	11.2	0.2	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
CPSase_L_chain	PF00289.17	gi|332797952|ref|YP_004459452.1|	-	0.12	12.4	0.0	0.41	10.7	0.0	1.8	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
DUF1877	PF08974.5	gi|332797953|ref|YP_004459453.1|	-	0.11	12.1	0.3	0.16	11.5	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1877)
Amidase	PF01425.16	gi|332797954|ref|YP_004459454.1|	-	3.9e-89	299.5	1.4	4.9e-88	295.8	0.9	1.9	1	1	0	1	1	1	1	Amidase
PEPcase_2	PF14010.1	gi|332797955|ref|YP_004459455.1|	-	1.9e-200	666.3	2.4	2.1e-200	666.2	1.7	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
AhpC-TSA	PF00578.16	gi|332797956|ref|YP_004459456.1|	-	6.2e-42	142.1	0.1	7.4e-42	141.9	0.1	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|332797956|ref|YP_004459456.1|	-	1.3e-25	89.6	0.1	1.6e-25	89.3	0.1	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|332797956|ref|YP_004459456.1|	-	3.4e-05	23.3	0.0	4.4e-05	23.0	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
Thioredoxin_8	PF13905.1	gi|332797956|ref|YP_004459456.1|	-	0.00087	19.3	0.0	0.0013	18.7	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|332797956|ref|YP_004459456.1|	-	0.0012	18.7	0.0	0.002	18.0	0.0	1.3	1	0	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
M60-like	PF13402.1	gi|332797956|ref|YP_004459456.1|	-	0.038	12.8	0.0	0.11	11.3	0.0	1.5	1	1	0	2	2	2	0	Peptidase	M60-like	family
AAA_22	PF13401.1	gi|332797956|ref|YP_004459456.1|	-	0.042	13.9	0.0	0.054	13.6	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
TSCPD	PF12637.2	gi|332797956|ref|YP_004459456.1|	-	0.099	12.6	0.0	0.19	11.6	0.0	1.4	1	0	0	1	1	1	0	TSCPD	domain
Carb_kinase	PF01256.12	gi|332797957|ref|YP_004459457.1|	-	8.5e-49	166.0	0.0	1.3e-48	165.4	0.0	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|332797957|ref|YP_004459457.1|	-	2.7e-46	157.2	0.0	3.4e-45	153.6	0.0	2.2	2	0	0	2	2	2	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|332797957|ref|YP_004459457.1|	-	9.5e-10	38.0	0.0	5.3e-07	29.0	0.0	2.2	2	0	0	2	2	2	2	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|332797957|ref|YP_004459457.1|	-	0.0013	17.9	0.0	0.0023	17.1	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
KR	PF08659.5	gi|332797957|ref|YP_004459457.1|	-	0.012	15.2	0.0	0.027	14.1	0.0	1.6	1	0	0	1	1	1	0	KR	domain
adh_short	PF00106.20	gi|332797957|ref|YP_004459457.1|	-	0.072	12.9	1.9	0.075	12.9	0.0	1.9	2	1	0	2	2	2	0	short	chain	dehydrogenase
TPR_15	PF13429.1	gi|332797958|ref|YP_004459458.1|	-	0.0051	15.8	4.4	0.033	13.2	0.1	2.4	2	1	0	2	2	2	1	Tetratricopeptide	repeat
DUF2153	PF09921.4	gi|332797958|ref|YP_004459458.1|	-	0.0087	15.6	0.5	1.1	8.8	0.0	2.3	1	1	1	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
Latrotoxin_C	PF15658.1	gi|332797958|ref|YP_004459458.1|	-	0.0095	15.7	1.2	0.4	10.4	0.2	2.2	1	1	1	2	2	2	1	Latrotoxin	C-terminal	domain
DUF2024	PF09630.5	gi|332797958|ref|YP_004459458.1|	-	0.059	13.1	6.9	1.8	8.3	0.4	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2024)
Blo-t-5	PF11642.3	gi|332797958|ref|YP_004459458.1|	-	0.32	10.7	8.3	0.81	9.4	0.4	2.8	1	1	2	3	3	3	0	Mite	allergen	Blo	t	5
DUF892	PF05974.7	gi|332797958|ref|YP_004459458.1|	-	0.82	9.4	16.1	1.3	8.7	2.8	3.3	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF892)
DUF4611	PF15387.1	gi|332797958|ref|YP_004459458.1|	-	1.4	9.1	6.0	0.57	10.3	0.5	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4611)
DUF87	PF01935.12	gi|332797959|ref|YP_004459459.1|	-	4.4e-43	147.7	1.0	6.7e-43	147.1	0.7	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|332797959|ref|YP_004459459.1|	-	3.4e-21	75.9	1.4	1.3e-19	70.8	1.0	2.1	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|332797959|ref|YP_004459459.1|	-	3.7e-11	42.0	0.1	2e-06	26.4	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
HAS-barrel	PF09378.5	gi|332797959|ref|YP_004459459.1|	-	9.6e-08	31.8	0.1	3.8e-07	29.9	0.1	2.1	1	0	0	1	1	1	1	HAS	barrel	domain
FtsK_SpoIIIE	PF01580.13	gi|332797959|ref|YP_004459459.1|	-	2.4e-06	27.1	0.0	0.0032	16.9	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|332797959|ref|YP_004459459.1|	-	7.6e-06	24.7	0.0	7.6e-05	21.5	0.0	2.0	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
PSII_Pbs27	PF13326.1	gi|332797959|ref|YP_004459459.1|	-	0.026	14.5	0.0	0.058	13.3	0.0	1.5	1	0	0	1	1	1	0	Photosystem	II	Pbs27
ABC_tran	PF00005.22	gi|332797959|ref|YP_004459459.1|	-	0.076	13.3	0.1	0.16	12.2	0.0	1.6	1	1	0	1	1	1	0	ABC	transporter
Metallophos_2	PF12850.2	gi|332797960|ref|YP_004459460.1|	-	7.3e-16	58.3	0.0	1.1e-15	57.8	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|332797960|ref|YP_004459460.1|	-	3.7e-15	55.8	0.2	6.3e-15	55.1	0.1	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
DUF3161	PF11362.3	gi|332797960|ref|YP_004459460.1|	-	0.081	12.8	0.0	0.17	11.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3161)
RA	PF00788.18	gi|332797960|ref|YP_004459460.1|	-	0.11	13.0	0.0	0.22	12.0	0.0	1.5	1	0	0	1	1	1	0	Ras	association	(RalGDS/AF-6)	domain
Rad50_zn_hook	PF04423.9	gi|332797961|ref|YP_004459461.1|	-	6.4e-10	38.3	6.3	6.4e-10	38.3	4.3	9.5	11	1	0	11	11	10	1	Rad50	zinc	hook	motif
AAA_23	PF13476.1	gi|332797961|ref|YP_004459461.1|	-	1.6e-09	38.4	60.3	1.6e-09	38.4	41.8	7.4	1	1	5	6	6	3	1	AAA	domain
SMC_N	PF02463.14	gi|332797961|ref|YP_004459461.1|	-	3.5e-09	36.2	2.3	3.5e-09	36.2	1.6	3.0	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_27	PF13514.1	gi|332797961|ref|YP_004459461.1|	-	4.6e-07	27.9	73.6	0.00089	17.0	0.0	4.5	3	1	2	5	5	5	4	AAA	domain
SbcCD_C	PF13558.1	gi|332797961|ref|YP_004459461.1|	-	4e-06	26.6	0.0	9.3e-06	25.4	0.0	1.6	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|332797961|ref|YP_004459461.1|	-	6.5e-06	24.9	121.8	0.00021	19.8	24.8	5.5	1	1	4	6	6	6	5	AAA	domain
AAA_21	PF13304.1	gi|332797961|ref|YP_004459461.1|	-	1.3e-05	25.3	55.3	0.0001	22.4	17.5	4.3	1	1	3	4	4	3	2	AAA	domain
AAA_29	PF13555.1	gi|332797961|ref|YP_004459461.1|	-	6.8e-05	22.3	0.0	0.00015	21.2	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
IncA	PF04156.9	gi|332797961|ref|YP_004459461.1|	-	9.7e-05	22.0	108.6	0.0037	16.8	13.0	5.8	1	1	4	5	5	5	3	IncA	protein
DUF258	PF03193.11	gi|332797961|ref|YP_004459461.1|	-	0.0022	17.2	0.2	0.012	14.8	0.2	2.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|332797961|ref|YP_004459461.1|	-	0.0024	18.1	0.4	0.0024	18.1	0.3	6.2	2	1	1	3	3	2	1	ABC	transporter
Reo_sigmaC	PF04582.7	gi|332797961|ref|YP_004459461.1|	-	0.0044	16.2	20.1	0.52	9.4	0.4	4.6	1	1	3	5	5	5	3	Reovirus	sigma	C	capsid	protein
NPV_P10	PF05531.7	gi|332797961|ref|YP_004459461.1|	-	0.0056	16.8	47.9	0.2	11.9	0.2	9.0	5	4	3	8	8	8	3	Nucleopolyhedrovirus	P10	protein
AAA_15	PF13175.1	gi|332797961|ref|YP_004459461.1|	-	0.033	13.2	153.5	0.57	9.1	55.1	3.1	1	1	1	2	2	2	0	AAA	ATPase	domain
DUF3584	PF12128.3	gi|332797961|ref|YP_004459461.1|	-	0.042	11.2	81.6	0.001	16.5	28.9	4.1	2	1	1	4	4	4	0	Protein	of	unknown	function	(DUF3584)
AAA_25	PF13481.1	gi|332797961|ref|YP_004459461.1|	-	0.24	10.7	0.5	4.7	6.5	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
PilJ	PF13675.1	gi|332797961|ref|YP_004459461.1|	-	0.37	11.1	15.8	0.86	9.9	0.6	5.7	2	2	3	5	5	5	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
TraF_2	PF13729.1	gi|332797961|ref|YP_004459461.1|	-	3.6	6.2	6.1	21	3.8	0.2	3.6	2	1	0	2	2	2	0	F	plasmid	transfer	operon,	TraF,	protein
NurA	PF09376.5	gi|332797962|ref|YP_004459462.1|	-	8e-29	100.8	2.3	1.1e-28	100.3	1.6	1.2	1	0	0	1	1	1	1	NurA	domain
Cation_efflux	PF01545.16	gi|332797963|ref|YP_004459463.1|	-	1.3e-37	129.4	14.4	1.4e-37	129.2	10.0	1.0	1	0	0	1	1	1	1	Cation	efflux	family
ABA_GPCR	PF12430.3	gi|332797963|ref|YP_004459463.1|	-	0.003	16.7	0.5	0.003	16.7	0.3	2.1	2	1	0	2	2	2	1	Abscisic	acid	G-protein	coupled	receptor
UPF0139	PF03669.8	gi|332797963|ref|YP_004459463.1|	-	0.011	15.2	0.7	0.56	9.7	0.4	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0139)
Ycf66_N	PF07444.6	gi|332797963|ref|YP_004459463.1|	-	5	6.8	9.9	4.1	7.1	0.5	2.7	2	1	0	2	2	2	0	Ycf66	protein	N-terminus
Methyltransf_11	PF08241.7	gi|332797964|ref|YP_004459464.1|	-	3.3e-10	40.3	0.0	4.9e-10	39.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|332797964|ref|YP_004459464.1|	-	0.00082	18.5	0.0	0.0014	17.7	0.0	1.4	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.1	gi|332797964|ref|YP_004459464.1|	-	0.011	15.3	0.2	0.021	14.4	0.1	1.5	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332797964|ref|YP_004459464.1|	-	0.019	15.3	0.0	0.044	14.1	0.0	1.6	2	0	0	2	2	2	0	Methyltransferase	domain
DEAD_2	PF06733.10	gi|332797965|ref|YP_004459465.1|	-	0.015	14.7	1.2	0.026	13.9	0.8	1.5	1	1	0	1	1	1	0	DEAD_2
PHTB1_C	PF14728.1	gi|332797965|ref|YP_004459465.1|	-	0.024	13.4	0.0	0.04	12.7	0.0	1.3	1	0	0	1	1	1	0	PTHB1	C-terminus
Imm8	PF15560.1	gi|332797965|ref|YP_004459465.1|	-	0.04	13.5	3.8	0.3	10.7	2.6	2.0	1	1	0	1	1	1	0	Immunity	protein	8
CBS	PF00571.23	gi|332797966|ref|YP_004459466.1|	-	9.9e-43	143.6	7.8	1.1e-12	47.5	0.2	4.1	4	0	0	4	4	4	4	CBS	domain
DUF77	PF01910.12	gi|332797967|ref|YP_004459467.1|	-	1.5e-25	88.6	0.8	1.7e-25	88.4	0.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF77
Tbf5	PF06331.7	gi|332797967|ref|YP_004459467.1|	-	0.12	12.1	1.0	0.23	11.2	0.7	1.7	1	1	0	1	1	1	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
FUR	PF01475.14	gi|332797968|ref|YP_004459468.1|	-	1.9e-23	82.6	0.0	2.2e-23	82.4	0.0	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_5	PF01022.15	gi|332797968|ref|YP_004459468.1|	-	9.7e-06	25.1	0.0	0.00025	20.6	0.0	2.5	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|332797968|ref|YP_004459468.1|	-	1.7e-05	24.5	0.0	2.8e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|332797968|ref|YP_004459468.1|	-	0.00028	20.4	0.6	0.0024	17.5	0.0	2.7	2	1	1	3	3	3	1	HTH	domain
HTH_32	PF13565.1	gi|332797968|ref|YP_004459468.1|	-	0.00041	21.0	0.0	0.011	16.5	0.0	2.1	2	0	0	2	2	2	1	Homeodomain-like	domain
PadR	PF03551.9	gi|332797968|ref|YP_004459468.1|	-	0.0016	18.1	0.2	0.0032	17.2	0.0	1.5	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_CodY	PF08222.6	gi|332797968|ref|YP_004459468.1|	-	0.0019	17.5	0.3	0.0061	15.8	0.1	2.0	1	1	1	2	2	2	1	CodY	helix-turn-helix	domain
HTH_28	PF13518.1	gi|332797968|ref|YP_004459468.1|	-	0.0024	17.8	0.0	0.024	14.6	0.0	2.4	2	1	0	2	2	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|332797968|ref|YP_004459468.1|	-	0.0045	16.6	0.0	0.048	13.3	0.0	2.4	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|332797968|ref|YP_004459468.1|	-	0.0073	15.9	0.0	0.015	14.8	0.0	1.6	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_24	PF13412.1	gi|332797968|ref|YP_004459468.1|	-	0.013	14.8	0.4	0.05	12.9	0.1	2.2	2	1	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF2250	PF10007.4	gi|332797968|ref|YP_004459468.1|	-	0.022	14.6	0.0	0.057	13.3	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF2551	PF10826.3	gi|332797968|ref|YP_004459468.1|	-	0.027	14.3	0.0	0.29	11.0	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2551)
Penicillinase_R	PF03965.11	gi|332797968|ref|YP_004459468.1|	-	0.027	14.5	0.0	0.051	13.6	0.0	1.4	2	0	0	2	2	1	0	Penicillinase	repressor
UPF0180	PF03698.8	gi|332797968|ref|YP_004459468.1|	-	0.075	12.8	0.2	0.54	10.1	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
Arg_repressor	PF01316.16	gi|332797968|ref|YP_004459468.1|	-	0.086	12.4	0.3	6.6	6.3	0.0	2.8	2	1	1	3	3	3	0	Arginine	repressor,	DNA	binding	domain
NSP10	PF09401.5	gi|332797968|ref|YP_004459468.1|	-	0.11	12.2	0.0	0.14	11.9	0.0	1.2	1	0	0	1	1	1	0	RNA	synthesis	protein	NSP10
RPA_C	PF08784.6	gi|332797968|ref|YP_004459468.1|	-	0.11	12.8	0.1	0.69	10.3	0.0	2.0	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Sigma70_r1_1	PF03979.9	gi|332797968|ref|YP_004459468.1|	-	0.16	11.8	1.6	1.6	8.7	0.4	2.3	1	1	1	2	2	2	0	Sigma-70	factor,	region	1.1
IU_nuc_hydro	PF01156.14	gi|332797969|ref|YP_004459469.1|	-	5.1e-78	262.4	0.0	5.7e-78	262.2	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
AAA_23	PF13476.1	gi|332797970|ref|YP_004459470.1|	-	2e-07	31.5	29.8	2e-07	31.5	20.7	4.8	2	1	1	3	3	2	1	AAA	domain
AAA_27	PF13514.1	gi|332797970|ref|YP_004459470.1|	-	5.5e-06	24.4	49.2	2.8e-05	22.0	0.8	3.2	3	0	0	3	3	3	2	AAA	domain
Filament	PF00038.16	gi|332797970|ref|YP_004459470.1|	-	1.3e-05	24.7	61.2	0.037	13.4	23.0	4.3	1	1	1	2	2	2	2	Intermediate	filament	protein
AAA_13	PF13166.1	gi|332797970|ref|YP_004459470.1|	-	0.00012	20.7	59.1	0.09	11.2	40.5	2.7	1	1	0	1	1	1	1	AAA	domain
BLOC1_2	PF10046.4	gi|332797970|ref|YP_004459470.1|	-	0.0047	17.0	6.1	0.0047	17.0	4.2	6.5	3	2	3	6	6	6	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
IncA	PF04156.9	gi|332797970|ref|YP_004459470.1|	-	0.01	15.4	23.0	0.01	15.4	15.9	4.2	1	1	3	4	4	4	0	IncA	protein
NPV_P10	PF05531.7	gi|332797970|ref|YP_004459470.1|	-	0.012	15.8	28.8	0.21	11.8	2.8	5.1	3	2	1	4	4	4	0	Nucleopolyhedrovirus	P10	protein
FlxA	PF14282.1	gi|332797970|ref|YP_004459470.1|	-	0.017	15.0	14.6	0.017	15.0	10.1	4.7	2	2	2	4	4	4	0	FlxA-like	protein
Reo_sigmaC	PF04582.7	gi|332797970|ref|YP_004459470.1|	-	0.051	12.7	19.1	0.14	11.3	2.9	3.7	1	1	2	4	4	4	0	Reovirus	sigma	C	capsid	protein
SbcCD_C	PF13558.1	gi|332797970|ref|YP_004459470.1|	-	0.06	13.2	0.1	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
WXG100	PF06013.7	gi|332797970|ref|YP_004459470.1|	-	0.11	12.5	12.3	5.8	6.9	0.2	5.3	4	2	1	5	5	5	0	Proteins	of	100	residues	with	WXG
DUF3584	PF12128.3	gi|332797970|ref|YP_004459470.1|	-	0.3	8.3	56.2	0.36	8.1	0.2	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3584)
Prefoldin_2	PF01920.15	gi|332797970|ref|YP_004459470.1|	-	0.31	10.8	71.1	0.27	11.0	9.9	8.3	3	2	4	7	7	7	0	Prefoldin	subunit
Myosin_tail_1	PF01576.14	gi|332797970|ref|YP_004459470.1|	-	0.58	7.8	69.7	7	4.2	48.3	2.1	1	1	0	1	1	1	0	Myosin	tail
Baculo_PEP_C	PF04513.7	gi|332797970|ref|YP_004459470.1|	-	1	9.1	28.3	0.73	9.6	4.1	4.5	2	2	4	6	6	6	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Fungal_trans_2	PF11951.3	gi|332797970|ref|YP_004459470.1|	-	3.4	6.1	19.2	0.63	8.5	1.0	3.4	3	0	0	3	3	3	0	Fungal	specific	transcription	factor	domain
DUF1192	PF06698.6	gi|332797970|ref|YP_004459470.1|	-	3.6	7.4	27.9	1.4	8.7	1.4	5.2	4	1	1	5	5	4	0	Protein	of	unknown	function	(DUF1192)
Syntaxin-6_N	PF09177.6	gi|332797970|ref|YP_004459470.1|	-	7.6	7.0	45.3	1.2	9.5	5.4	5.5	2	2	3	5	5	5	0	Syntaxin	6,	N-terminal
Sld5	PF05916.6	gi|332797971|ref|YP_004459471.1|	-	0.087	13.1	0.0	0.12	12.7	0.0	1.3	1	0	0	1	1	1	0	GINS	complex	protein
CBS	PF00571.23	gi|332797972|ref|YP_004459472.1|	-	4e-35	119.3	3.4	4.4e-17	61.5	0.3	2.1	2	0	0	2	2	2	2	CBS	domain
Rad50_zn_hook	PF04423.9	gi|332797972|ref|YP_004459472.1|	-	0.0012	18.2	0.0	0.0023	17.3	0.0	1.4	1	0	0	1	1	1	1	Rad50	zinc	hook	motif
Ribosomal_L9_C	PF03948.9	gi|332797972|ref|YP_004459472.1|	-	0.013	15.5	0.2	1.8	8.6	0.0	2.4	2	1	0	2	2	2	0	Ribosomal	protein	L9,	C-terminal	domain
Metallophos_2	PF12850.2	gi|332797973|ref|YP_004459473.1|	-	4.8e-09	36.2	0.0	4.4e-08	33.1	0.0	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|332797973|ref|YP_004459473.1|	-	6.3e-07	28.9	6.2	9.3e-06	25.1	4.3	2.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|332797973|ref|YP_004459473.1|	-	1.2e-06	27.8	1.0	3.5e-05	23.1	0.0	2.5	3	0	0	3	3	3	2	Metallophosphoesterase,	calcineurin	superfamily
His_Phos_1	PF00300.17	gi|332797974|ref|YP_004459474.1|	-	1.2e-27	96.9	0.0	1.6e-27	96.5	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
tRNA_deacylase	PF04414.7	gi|332797975|ref|YP_004459475.1|	-	5.5e-64	215.2	0.2	6.3e-64	215.0	0.1	1.0	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
SpoU_sub_bind	PF08032.7	gi|332797975|ref|YP_004459475.1|	-	0.14	12.3	0.8	0.41	10.8	0.1	2.2	2	0	0	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
DAO	PF01266.19	gi|332797976|ref|YP_004459476.1|	-	1.2e-12	47.4	0.0	1.6e-08	33.8	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Thioredoxin	PF00085.15	gi|332797977|ref|YP_004459477.1|	-	2.4e-28	97.8	0.0	4.5e-28	96.9	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|332797977|ref|YP_004459477.1|	-	3e-09	37.0	0.3	1.4e-07	31.7	0.0	2.5	2	1	0	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|332797977|ref|YP_004459477.1|	-	2.3e-07	30.8	0.2	0.00042	20.3	0.0	2.8	2	1	1	3	3	3	2	Thioredoxin-like
Thioredoxin_9	PF14595.1	gi|332797977|ref|YP_004459477.1|	-	7.3e-07	28.8	0.3	9.8e-07	28.3	0.2	1.2	1	0	0	1	1	1	1	Thioredoxin
HyaE	PF07449.6	gi|332797977|ref|YP_004459477.1|	-	5.2e-06	26.3	0.0	1.6e-05	24.7	0.0	1.8	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Phosducin	PF02114.11	gi|332797977|ref|YP_004459477.1|	-	2.2e-05	23.3	0.0	2.8e-05	22.9	0.0	1.1	1	0	0	1	1	1	1	Phosducin
Thioredoxin_3	PF13192.1	gi|332797977|ref|YP_004459477.1|	-	3.1e-05	23.6	0.0	5.8e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|332797977|ref|YP_004459477.1|	-	5.4e-05	22.8	0.1	0.039	13.6	0.0	2.2	1	1	1	2	2	2	2	AhpC/TSA	family
Redoxin	PF08534.5	gi|332797977|ref|YP_004459477.1|	-	0.00022	20.7	0.0	0.0011	18.5	0.0	1.9	1	1	1	2	2	2	1	Redoxin
TraF	PF13728.1	gi|332797977|ref|YP_004459477.1|	-	0.013	14.9	0.1	0.048	13.1	0.1	1.9	1	1	0	1	1	1	0	F	plasmid	transfer	operon	protein
IpaB_EvcA	PF03278.8	gi|332797977|ref|YP_004459477.1|	-	0.045	12.9	0.3	0.063	12.4	0.2	1.2	1	0	0	1	1	1	0	IpaB/EvcA	family
Thioredoxin_7	PF13899.1	gi|332797977|ref|YP_004459477.1|	-	0.28	11.2	1.1	3.3	7.7	0.4	2.5	1	1	1	2	2	2	0	Thioredoxin-like
SapB_1	PF05184.10	gi|332797977|ref|YP_004459477.1|	-	1.8	8.4	4.4	0.52	10.2	0.2	2.2	3	0	0	3	3	3	0	Saposin-like	type	B,	region	1
NTPase_I-T	PF01931.13	gi|332797979|ref|YP_004459479.1|	-	5e-37	127.2	0.0	5.6e-37	127.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
VitK2_biosynth	PF02621.9	gi|332797980|ref|YP_004459480.1|	-	4.5e-50	170.1	0.0	5.1e-50	170.0	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
Cation_efflux	PF01545.16	gi|332797982|ref|YP_004459482.1|	-	3.8e-28	98.3	15.0	4.5e-28	98.1	10.4	1.1	1	0	0	1	1	1	1	Cation	efflux	family
DUF983	PF06170.7	gi|332797982|ref|YP_004459482.1|	-	4.3	7.5	5.4	1.3	9.1	1.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF983)
RHH_1	PF01402.16	gi|332797983|ref|YP_004459483.1|	-	0.025	14.4	0.6	0.87	9.5	0.0	3.1	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
EMG1	PF03587.9	gi|332797984|ref|YP_004459484.1|	-	3.1e-44	150.7	0.1	3.5e-44	150.5	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Rpr2	PF04032.11	gi|332797985|ref|YP_004459485.1|	-	8e-19	67.3	0.2	9.8e-19	67.0	0.1	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
DUF371	PF04027.8	gi|332797986|ref|YP_004459486.1|	-	4e-45	152.7	0.1	4.7e-45	152.4	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
OmpH	PF03938.9	gi|332797986|ref|YP_004459486.1|	-	0.44	10.4	1.9	5.9	6.7	1.3	2.0	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Met_10	PF02475.11	gi|332797987|ref|YP_004459487.1|	-	4.1e-35	121.2	1.1	5e-35	120.9	0.7	1.0	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_11	PF08241.7	gi|332797987|ref|YP_004459487.1|	-	6.6e-06	26.5	0.0	1.2e-05	25.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|332797987|ref|YP_004459487.1|	-	2.6e-05	23.8	0.0	5.3e-05	22.8	0.0	1.6	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|332797987|ref|YP_004459487.1|	-	7.7e-05	22.9	0.0	0.00014	22.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|332797987|ref|YP_004459487.1|	-	0.00012	21.3	0.0	0.00018	20.7	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.1	gi|332797987|ref|YP_004459487.1|	-	0.00014	21.4	0.1	0.00022	20.8	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|332797987|ref|YP_004459487.1|	-	0.00038	20.4	0.0	0.00056	19.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332797987|ref|YP_004459487.1|	-	0.00051	19.4	0.0	0.00075	18.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Cons_hypoth95	PF03602.10	gi|332797987|ref|YP_004459487.1|	-	0.00061	19.2	0.0	0.00095	18.5	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.5	gi|332797987|ref|YP_004459487.1|	-	0.00091	18.8	0.1	0.0042	16.6	0.0	2.0	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_18	PF12847.2	gi|332797987|ref|YP_004459487.1|	-	0.0044	17.5	0.0	0.0067	16.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
TRM	PF02005.11	gi|332797987|ref|YP_004459487.1|	-	0.013	14.4	0.1	0.019	13.8	0.0	1.2	1	1	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
Med6	PF04934.9	gi|332797987|ref|YP_004459487.1|	-	0.024	14.1	0.1	0.052	13.0	0.1	1.6	1	0	0	1	1	1	0	MED6	mediator	sub	complex	component
POTRA_1	PF08478.5	gi|332797987|ref|YP_004459487.1|	-	0.085	12.9	0.1	0.23	11.5	0.1	1.7	1	0	0	1	1	1	0	POTRA	domain,	FtsQ-type
Pyr_redox_2	PF07992.9	gi|332797988|ref|YP_004459488.1|	-	1.1e-21	77.7	0.0	1.7e-21	77.0	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|332797988|ref|YP_004459488.1|	-	2.1e-18	67.1	0.2	7.3e-12	45.7	0.0	2.6	2	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|332797988|ref|YP_004459488.1|	-	2.4e-13	50.3	0.2	1.9e-09	37.7	0.0	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|332797988|ref|YP_004459488.1|	-	6.5e-12	45.0	0.2	2e-08	33.5	0.0	3.7	3	1	1	4	4	4	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|332797988|ref|YP_004459488.1|	-	4.3e-11	41.9	0.4	6.2e-05	21.6	0.0	3.5	4	0	0	4	4	4	2	HI0933-like	protein
DAO	PF01266.19	gi|332797988|ref|YP_004459488.1|	-	4e-07	29.2	0.2	0.00039	19.4	0.0	3.1	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|332797988|ref|YP_004459488.1|	-	1.1e-06	28.8	0.2	0.00029	21.0	0.1	2.7	2	1	0	2	2	2	1	Putative	NAD(P)-binding
NAD_binding_8	PF13450.1	gi|332797988|ref|YP_004459488.1|	-	6.1e-06	26.1	0.1	0.00019	21.3	0.0	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|332797988|ref|YP_004459488.1|	-	9.6e-06	24.6	0.8	0.052	12.3	0.0	3.4	2	1	0	3	3	3	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|332797988|ref|YP_004459488.1|	-	7.4e-05	21.9	0.4	0.0012	18.0	0.0	2.6	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|332797988|ref|YP_004459488.1|	-	0.00015	20.9	0.2	0.0014	17.7	0.0	2.5	3	0	0	3	3	3	1	Thi4	family
FAD_binding_3	PF01494.14	gi|332797988|ref|YP_004459488.1|	-	0.00057	19.0	0.3	1.7	7.6	0.0	3.0	2	1	1	3	3	3	2	FAD	binding	domain
FMO-like	PF00743.14	gi|332797988|ref|YP_004459488.1|	-	0.0014	16.8	0.3	0.0095	14.1	0.0	2.0	1	1	0	2	2	2	1	Flavin-binding	monooxygenase-like
GIDA	PF01134.17	gi|332797988|ref|YP_004459488.1|	-	0.0031	16.4	0.1	11	4.7	0.0	3.6	4	0	0	4	4	4	0	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|332797988|ref|YP_004459488.1|	-	0.0038	16.2	0.0	6.1	5.6	0.0	3.1	2	1	1	3	3	3	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|332797988|ref|YP_004459488.1|	-	0.01	15.6	1.3	1.6	8.4	0.0	3.2	3	1	0	3	3	3	0	FAD-NAD(P)-binding
Spermine_synth	PF01564.12	gi|332797988|ref|YP_004459488.1|	-	0.051	12.5	0.3	0.15	10.9	0.0	1.8	2	0	0	2	2	2	0	Spermine/spermidine	synthase
Shikimate_DH	PF01488.15	gi|332797988|ref|YP_004459488.1|	-	0.11	12.5	0.6	0.22	11.6	0.0	1.8	2	0	0	2	2	1	0	Shikimate	/	quinate	5-dehydrogenase
MFS_1	PF07690.11	gi|332797990|ref|YP_004459490.1|	-	6.3e-22	77.7	50.3	1.3e-21	76.6	34.1	2.0	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
NAD_kinase	PF01513.16	gi|332797991|ref|YP_004459491.1|	-	3.2e-26	91.7	0.3	4e-26	91.4	0.2	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|332797991|ref|YP_004459491.1|	-	0.0028	17.0	0.0	0.0058	16.0	0.0	1.5	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
PrpR_N	PF06506.6	gi|332797991|ref|YP_004459491.1|	-	0.012	15.0	0.1	0.019	14.4	0.0	1.3	1	0	0	1	1	1	0	Propionate	catabolism	activator
Glyco_tran_28_C	PF04101.11	gi|332797991|ref|YP_004459491.1|	-	0.036	13.7	0.0	0.053	13.1	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	family	28	C-terminal	domain
DUF104	PF01954.11	gi|332797991|ref|YP_004459491.1|	-	2.3	8.2	7.1	10	6.2	0.0	3.2	3	1	1	4	4	4	0	Protein	of	unknown	function	DUF104
zf-C3HC4_3	PF13920.1	gi|332797992|ref|YP_004459492.1|	-	0.0063	16.1	0.6	0.0092	15.6	0.4	1.2	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.14	gi|332797992|ref|YP_004459492.1|	-	0.007	16.0	0.3	0.0094	15.6	0.2	1.4	1	1	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
ER	PF01133.12	gi|332797992|ref|YP_004459492.1|	-	0.012	15.2	0.3	0.02	14.5	0.2	1.3	1	0	0	1	1	1	0	Enhancer	of	rudimentary
DZR	PF12773.2	gi|332797992|ref|YP_004459492.1|	-	0.013	15.2	0.2	0.019	14.7	0.1	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Abdominal-A	PF12407.3	gi|332797992|ref|YP_004459492.1|	-	0.019	14.4	0.2	0.042	13.3	0.2	1.6	1	0	0	1	1	1	0	Homeobox	protein
FANCL_C	PF11793.3	gi|332797992|ref|YP_004459492.1|	-	0.068	13.1	1.0	0.11	12.4	0.7	1.3	1	0	0	1	1	1	0	FANCL	C-terminal	domain
ParA	PF10609.4	gi|332797992|ref|YP_004459492.1|	-	0.09	12.6	2.1	1.7	8.5	0.1	2.3	1	1	1	2	2	2	0	ParA/MinD	ATPase	like
zf-H2C2_2	PF13465.1	gi|332797992|ref|YP_004459492.1|	-	0.16	12.3	3.2	2.4	8.5	0.2	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
A2L_zn_ribbon	PF08792.5	gi|332797992|ref|YP_004459492.1|	-	0.16	11.4	4.0	0.92	9.0	0.3	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|332797992|ref|YP_004459492.1|	-	2.7	7.5	5.5	1	8.9	0.6	1.8	1	1	2	3	3	3	0	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|332797992|ref|YP_004459492.1|	-	3.1	8.3	4.8	16	6.1	0.4	2.5	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-C2HC_2	PF13913.1	gi|332797992|ref|YP_004459492.1|	-	5.7	6.7	7.6	16	5.2	0.6	2.2	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Aminotran_5	PF00266.14	gi|332797994|ref|YP_004459494.1|	-	1.4e-46	158.9	0.0	1.9e-46	158.5	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|332797994|ref|YP_004459494.1|	-	0.00059	18.2	0.2	0.0011	17.3	0.1	1.4	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|332797994|ref|YP_004459494.1|	-	0.015	14.3	0.5	0.53	9.2	0.1	2.1	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
NadA	PF02445.11	gi|332797995|ref|YP_004459495.1|	-	1e-104	349.5	2.5	1.2e-104	349.3	1.7	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
DUF3524	PF12038.3	gi|332797995|ref|YP_004459495.1|	-	0.088	12.3	0.1	0.19	11.2	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3524)
DUF1246	PF06849.7	gi|332797995|ref|YP_004459495.1|	-	0.12	12.1	0.6	2.8	7.7	0.0	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1246)
Complex1_LYR_1	PF13232.1	gi|332797996|ref|YP_004459496.1|	-	0.13	12.4	0.1	1.1	9.5	0.0	2.1	1	1	1	2	2	2	0	Complex1_LYR-like
DBI_PRT	PF02277.12	gi|332797997|ref|YP_004459497.1|	-	5.4e-34	117.7	0.1	7.1e-34	117.3	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyltransferase
HypA	PF01155.14	gi|332797998|ref|YP_004459498.1|	-	0.012	15.3	0.1	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF387	PF04079.11	gi|332797998|ref|YP_004459498.1|	-	0.021	14.1	0.1	0.026	13.8	0.0	1.1	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
IBR	PF01485.16	gi|332797998|ref|YP_004459498.1|	-	0.048	13.5	0.4	0.063	13.1	0.3	1.2	1	0	0	1	1	1	0	IBR	domain
HTH_20	PF12840.2	gi|332797998|ref|YP_004459498.1|	-	0.049	13.4	0.0	0.065	13.0	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|332797998|ref|YP_004459498.1|	-	0.05	13.3	0.1	0.11	12.2	0.1	1.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|332797998|ref|YP_004459498.1|	-	0.067	12.8	0.0	0.088	12.4	0.0	1.3	1	0	0	1	1	1	0	HTH	domain
z-alpha	PF02295.12	gi|332797998|ref|YP_004459498.1|	-	0.07	12.9	0.2	0.13	12.0	0.1	1.4	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
TF_Zn_Ribbon	PF08271.7	gi|332797998|ref|YP_004459498.1|	-	0.093	12.0	3.1	2.8	7.3	0.4	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
HTH_5	PF01022.15	gi|332797998|ref|YP_004459498.1|	-	0.11	12.1	0.0	0.22	11.2	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
DUF1451	PF07295.6	gi|332797998|ref|YP_004459498.1|	-	0.14	11.8	0.3	0.23	11.2	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
zf-RING_5	PF14634.1	gi|332797998|ref|YP_004459498.1|	-	0.26	11.0	2.0	0.46	10.2	1.4	1.4	1	0	0	1	1	1	0	zinc-RING	finger	domain
ADK_lid	PF05191.9	gi|332797998|ref|YP_004459498.1|	-	0.34	10.6	3.0	2.1	8.0	1.8	2.3	1	1	1	2	2	2	0	Adenylate	kinase,	active	site	lid
UPF0547	PF10571.4	gi|332797998|ref|YP_004459498.1|	-	0.36	10.5	5.4	0.48	10.1	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.5	gi|332797998|ref|YP_004459498.1|	-	0.38	10.7	3.9	1.6	8.7	2.7	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|332797998|ref|YP_004459498.1|	-	0.51	10.7	2.3	2.9	8.4	0.1	2.6	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
TFIIS_C	PF01096.13	gi|332797998|ref|YP_004459498.1|	-	0.61	9.7	3.0	26	4.5	0.3	2.9	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-H2C2_2	PF13465.1	gi|332797998|ref|YP_004459498.1|	-	1.1	9.7	8.2	2.6	8.4	0.2	2.4	1	1	1	2	2	2	0	Zinc-finger	double	domain
PhnA_Zn_Ribbon	PF08274.7	gi|332797998|ref|YP_004459498.1|	-	4.5	7.1	7.2	2.8	7.7	0.7	2.2	1	1	1	2	2	2	0	PhnA	Zinc-Ribbon
HAD_2	PF13419.1	gi|332797999|ref|YP_004459499.1|	-	3.8e-20	72.8	0.0	4.5e-20	72.5	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|332797999|ref|YP_004459499.1|	-	1.3e-06	29.0	0.0	5e-05	23.8	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|332797999|ref|YP_004459499.1|	-	0.0025	17.4	0.1	0.0078	15.9	0.0	1.8	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|332797999|ref|YP_004459499.1|	-	0.012	15.4	0.0	0.051	13.4	0.0	1.9	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Cas_Csn2	PF09711.5	gi|332797999|ref|YP_004459499.1|	-	0.032	13.9	0.5	0.15	11.6	0.1	2.1	2	1	0	2	2	2	0	CRISPR-associated	protein	(Cas_Csn2)
DUF2789	PF10982.3	gi|332797999|ref|YP_004459499.1|	-	0.16	11.9	0.1	0.51	10.3	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2789)
Methyltransf_31	PF13847.1	gi|332798000|ref|YP_004459500.1|	-	1.6e-11	44.0	2.7	6.9e-11	41.9	1.9	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|332798000|ref|YP_004459500.1|	-	3.9e-11	43.0	0.0	4.6e-11	42.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332798000|ref|YP_004459500.1|	-	2e-10	40.3	0.0	3.1e-10	39.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|332798000|ref|YP_004459500.1|	-	1.7e-07	31.7	0.1	2.6e-07	31.2	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332798000|ref|YP_004459500.1|	-	2e-07	31.3	0.2	2.9e-07	30.7	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|332798000|ref|YP_004459500.1|	-	4.8e-06	26.9	0.1	1.8e-05	25.1	0.1	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|332798000|ref|YP_004459500.1|	-	5e-06	26.2	0.0	6.8e-06	25.7	0.0	1.3	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_12	PF08242.7	gi|332798000|ref|YP_004459500.1|	-	0.00028	21.2	0.1	0.0006	20.2	0.1	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
NodS	PF05401.6	gi|332798000|ref|YP_004459500.1|	-	0.0025	17.2	0.0	0.0041	16.5	0.0	1.3	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
DUF43	PF01861.11	gi|332798000|ref|YP_004459500.1|	-	0.0028	16.6	0.3	0.0036	16.3	0.2	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF43
Methyltransf_23	PF13489.1	gi|332798000|ref|YP_004459500.1|	-	0.0039	16.9	0.1	0.0065	16.1	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|332798000|ref|YP_004459500.1|	-	0.0049	16.0	0.0	0.012	14.7	0.0	1.6	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.10	gi|332798000|ref|YP_004459500.1|	-	0.0061	15.9	0.0	0.0069	15.7	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Orthopox_F14	PF06076.7	gi|332798000|ref|YP_004459500.1|	-	0.056	13.4	0.3	0.16	12.0	0.1	1.9	2	0	0	2	2	2	0	Orthopoxvirus	F14	protein
TehB	PF03848.9	gi|332798000|ref|YP_004459500.1|	-	0.1	11.7	0.4	0.99	8.5	0.2	2.0	1	1	1	2	2	2	0	Tellurite	resistance	protein	TehB
Hydrolase_3	PF08282.7	gi|332798001|ref|YP_004459501.1|	-	6.9e-27	94.6	0.6	1.7e-19	70.4	0.6	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|332798001|ref|YP_004459501.1|	-	1.4e-08	34.4	0.1	5.1e-05	22.6	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
HAD	PF12710.2	gi|332798001|ref|YP_004459501.1|	-	9.3e-07	29.2	0.1	2e-06	28.0	0.0	1.6	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Trehalose_PPase	PF02358.11	gi|332798001|ref|YP_004459501.1|	-	0.0082	15.0	0.0	0.056	12.3	0.0	2.0	2	0	0	2	2	2	1	Trehalose-phosphatase
Hydrolase	PF00702.21	gi|332798001|ref|YP_004459501.1|	-	0.044	14.2	0.2	0.095	13.0	0.1	1.8	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
MSP7_C	PF12948.2	gi|332798001|ref|YP_004459501.1|	-	0.12	12.6	0.4	0.44	10.7	0.0	1.9	2	0	0	2	2	2	0	MSP7-like	protein	C-terminal	domain
AP_endonuc_2	PF01261.19	gi|332798002|ref|YP_004459502.1|	-	1e-21	77.2	0.1	1.4e-21	76.7	0.1	1.2	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.9	gi|332798002|ref|YP_004459502.1|	-	0.00031	19.8	0.0	0.00046	19.3	0.0	1.2	1	0	0	1	1	1	1	UV-endonuclease	UvdE
DeoC	PF01791.4	gi|332798002|ref|YP_004459502.1|	-	0.039	13.2	0.1	0.054	12.7	0.1	1.3	1	0	0	1	1	1	0	DeoC/LacD	family	aldolase
PdxJ	PF03740.8	gi|332798002|ref|YP_004459502.1|	-	0.042	12.9	0.6	0.25	10.4	0.1	2.2	2	1	1	3	3	3	0	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
FAD_binding_4	PF01565.18	gi|332798003|ref|YP_004459503.1|	-	2.5e-34	117.7	0.0	4.4e-34	116.9	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_17	PF13534.1	gi|332798003|ref|YP_004459503.1|	-	1.3e-07	31.8	1.9	2.7e-07	30.8	1.3	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|332798003|ref|YP_004459503.1|	-	1.3e-07	31.4	3.0	2.7e-07	30.4	2.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|332798003|ref|YP_004459503.1|	-	7e-07	29.5	2.8	0.017	15.5	0.0	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|332798003|ref|YP_004459503.1|	-	1.4e-06	27.9	5.0	1.4e-05	24.7	4.2	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|332798003|ref|YP_004459503.1|	-	1.7e-05	25.1	5.1	4.2e-05	23.8	3.6	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|332798003|ref|YP_004459503.1|	-	0.002	18.3	9.3	0.07	13.3	7.6	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
FAD-oxidase_C	PF02913.14	gi|332798003|ref|YP_004459503.1|	-	0.0029	16.9	0.0	0.0087	15.4	0.0	1.8	2	0	0	2	2	2	1	FAD	linked	oxidases,	C-terminal	domain
Fer4_21	PF14697.1	gi|332798003|ref|YP_004459503.1|	-	0.0037	17.0	6.1	0.22	11.4	0.3	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|332798003|ref|YP_004459503.1|	-	0.015	16.0	7.4	0.058	14.1	5.1	2.0	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|332798003|ref|YP_004459503.1|	-	0.015	15.2	12.7	0.018	14.9	1.7	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|332798003|ref|YP_004459503.1|	-	0.039	13.5	16.5	0.17	11.5	2.6	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|332798003|ref|YP_004459503.1|	-	1.7	9.3	17.7	0.72	10.5	3.1	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|332798003|ref|YP_004459503.1|	-	2.4	8.6	12.0	1.3	9.4	1.8	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_6	PF12837.2	gi|332798003|ref|YP_004459503.1|	-	6	6.9	16.6	0.075	12.9	2.6	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
HIT	PF01230.18	gi|332798004|ref|YP_004459504.1|	-	2.4e-26	92.1	0.0	3.3e-26	91.6	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|332798004|ref|YP_004459504.1|	-	2.5e-15	56.7	0.0	3.7e-15	56.1	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|332798004|ref|YP_004459504.1|	-	0.00018	21.1	0.4	0.00028	20.5	0.2	1.4	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
SNARE_assoc	PF09335.6	gi|332798005|ref|YP_004459505.1|	-	0.00023	21.3	9.1	0.00048	20.3	5.2	2.3	2	1	0	2	2	2	1	SNARE	associated	Golgi	protein
PRA1	PF03208.14	gi|332798005|ref|YP_004459505.1|	-	0.31	10.3	5.8	0.2	10.9	2.6	1.8	2	0	0	2	2	2	0	PRA1	family	protein
NUDIX	PF00293.23	gi|332798006|ref|YP_004459506.1|	-	8.1e-15	54.6	0.0	1.1e-14	54.2	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
Chlor_dismutase	PF06778.7	gi|332798007|ref|YP_004459507.1|	-	2.1e-54	184.1	2.1	2.8e-50	170.7	0.0	2.0	1	1	1	2	2	2	2	Chlorite	dismutase
2_5_RNA_ligase2	PF13563.1	gi|332798007|ref|YP_004459507.1|	-	0.061	13.0	0.0	0.095	12.4	0.0	1.3	1	0	0	1	1	1	0	2'-5'	RNA	ligase	superfamily
Ribosomal_L18_c	PF14204.1	gi|332798008|ref|YP_004459508.1|	-	0.055	14.0	0.1	0.13	12.8	0.1	1.6	1	0	0	1	1	1	0	Ribosomal	L18	C-terminal	region
NAD_synthase	PF02540.12	gi|332798010|ref|YP_004459510.1|	-	3.6e-77	258.5	0.1	4.2e-77	258.3	0.1	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|332798010|ref|YP_004459510.1|	-	2.1e-06	26.5	0.0	0.00048	18.7	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|332798010|ref|YP_004459510.1|	-	7.8e-05	22.2	0.0	8.4e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.9	gi|332798010|ref|YP_004459510.1|	-	0.0002	20.8	0.1	0.00033	20.1	0.1	1.4	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.8	gi|332798010|ref|YP_004459510.1|	-	0.0013	18.0	0.3	0.0036	16.6	0.0	1.9	3	0	0	3	3	3	1	Queuosine	biosynthesis	protein	QueC
HTH_25	PF13413.1	gi|332798010|ref|YP_004459510.1|	-	0.079	12.6	0.2	5	6.8	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|332798010|ref|YP_004459510.1|	-	0.13	11.5	0.1	0.79	9.0	0.0	2.3	3	0	0	3	3	3	0	Sigma-70,	region	4
CN_hydrolase	PF00795.17	gi|332798011|ref|YP_004459511.1|	-	9.1e-12	44.7	0.0	1.4e-11	44.1	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF3874	PF12990.2	gi|332798011|ref|YP_004459511.1|	-	0.041	13.9	0.0	0.092	12.8	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknonw	function	from	B.	Theta	Gene	description	(DUF3874)
HTH_5	PF01022.15	gi|332798012|ref|YP_004459512.1|	-	5.2e-12	45.2	0.4	8.5e-12	44.5	0.3	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|332798012|ref|YP_004459512.1|	-	2.3e-10	40.1	0.1	3e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|332798012|ref|YP_004459512.1|	-	3.5e-10	39.4	1.2	5e-10	38.9	0.8	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|332798012|ref|YP_004459512.1|	-	3.4e-06	26.3	2.3	6e-06	25.5	0.2	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|332798012|ref|YP_004459512.1|	-	1.8e-05	24.6	0.7	2.3e-05	24.3	0.5	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|332798012|ref|YP_004459512.1|	-	3.4e-05	23.3	0.7	5.3e-05	22.7	0.3	1.4	1	1	0	1	1	1	1	HTH	domain
HTH_29	PF13551.1	gi|332798012|ref|YP_004459512.1|	-	7.8e-05	22.7	0.0	8.9e-05	22.6	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn	helix
Sigma70_r4_2	PF08281.7	gi|332798012|ref|YP_004459512.1|	-	0.00023	20.5	0.2	0.00038	19.8	0.1	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
MarR_2	PF12802.2	gi|332798012|ref|YP_004459512.1|	-	0.00043	19.8	0.0	0.00057	19.5	0.0	1.1	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|332798012|ref|YP_004459512.1|	-	0.00084	18.9	0.2	0.0013	18.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_28	PF13518.1	gi|332798012|ref|YP_004459512.1|	-	0.00086	19.2	0.1	0.0012	18.7	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|332798012|ref|YP_004459512.1|	-	0.0014	18.5	0.6	0.0024	17.7	0.4	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Penicillinase_R	PF03965.11	gi|332798012|ref|YP_004459512.1|	-	0.0014	18.6	1.0	0.0022	18.0	0.7	1.4	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_45	PF14947.1	gi|332798012|ref|YP_004459512.1|	-	0.0018	18.0	1.9	0.0022	17.7	1.0	1.4	1	1	0	1	1	1	1	Winged	helix-turn-helix
Phage_rep_org_N	PF09681.5	gi|332798012|ref|YP_004459512.1|	-	0.0032	17.0	0.1	0.0039	16.7	0.1	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_IclR	PF09339.5	gi|332798012|ref|YP_004459512.1|	-	0.0075	15.8	0.1	0.012	15.1	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|332798012|ref|YP_004459512.1|	-	0.0083	15.6	2.5	0.0091	15.4	1.7	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MerR_1	PF13411.1	gi|332798012|ref|YP_004459512.1|	-	0.0085	15.8	2.3	0.013	15.2	0.8	1.9	1	1	1	2	2	2	1	MerR	HTH	family	regulatory	protein
HTH_40	PF14493.1	gi|332798012|ref|YP_004459512.1|	-	0.015	15.4	0.1	0.017	15.3	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|332798012|ref|YP_004459512.1|	-	0.016	14.7	0.0	0.025	14.1	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_12	PF08461.5	gi|332798012|ref|YP_004459512.1|	-	0.018	14.7	0.5	0.038	13.7	0.3	1.7	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF2513	PF10711.4	gi|332798012|ref|YP_004459512.1|	-	0.022	14.8	0.7	0.029	14.4	0.5	1.3	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
DUF1495	PF07381.6	gi|332798012|ref|YP_004459512.1|	-	0.022	14.4	0.9	0.94	9.1	0.7	2.1	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_27	PF13463.1	gi|332798012|ref|YP_004459512.1|	-	0.022	15.0	0.1	0.033	14.5	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
FUR	PF01475.14	gi|332798012|ref|YP_004459512.1|	-	0.023	14.6	1.3	0.04	13.8	0.9	1.4	1	1	0	1	1	1	0	Ferric	uptake	regulator	family
GerE	PF00196.14	gi|332798012|ref|YP_004459512.1|	-	0.029	13.6	0.0	0.049	12.9	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Rrf2	PF02082.15	gi|332798012|ref|YP_004459512.1|	-	0.031	14.3	0.1	0.038	14.1	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
EAP30	PF04157.11	gi|332798012|ref|YP_004459512.1|	-	0.057	12.5	0.1	0.066	12.3	0.1	1.1	1	0	0	1	1	1	0	EAP30/Vps36	family
DUF4423	PF14394.1	gi|332798012|ref|YP_004459512.1|	-	0.068	12.7	0.2	0.083	12.4	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_10	PF04967.7	gi|332798012|ref|YP_004459512.1|	-	0.07	12.7	0.0	0.15	11.6	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_23	PF13384.1	gi|332798012|ref|YP_004459512.1|	-	0.071	12.7	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
LexA_DNA_bind	PF01726.11	gi|332798012|ref|YP_004459512.1|	-	0.073	12.6	0.1	0.15	11.6	0.0	1.6	1	1	0	1	1	1	0	LexA	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|332798012|ref|YP_004459512.1|	-	0.074	12.8	0.0	0.086	12.6	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF2551	PF10826.3	gi|332798012|ref|YP_004459512.1|	-	0.076	12.9	1.1	0.19	11.6	0.8	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2551)
HTH_26	PF13443.1	gi|332798012|ref|YP_004459512.1|	-	0.12	12.6	0.3	0.19	11.9	0.1	1.5	2	0	0	2	2	1	0	Cro/C1-type	HTH	DNA-binding	domain
DUF2089	PF09862.4	gi|332798012|ref|YP_004459512.1|	-	0.12	12.1	2.1	0.89	9.3	0.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
PadR	PF03551.9	gi|332798012|ref|YP_004459512.1|	-	0.13	12.0	2.6	0.33	10.7	1.8	1.6	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
ABC2_membrane_3	PF12698.2	gi|332798013|ref|YP_004459513.1|	-	0.014	14.4	6.4	0.0083	15.2	3.4	1.3	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ASFV_J13L	PF05568.6	gi|332798013|ref|YP_004459513.1|	-	0.18	11.3	4.1	0.27	10.7	2.8	1.2	1	0	0	1	1	1	0	African	swine	fever	virus	J13L	protein
Methyltransf_23	PF13489.1	gi|332798014|ref|YP_004459514.1|	-	6.2e-14	52.0	0.0	1.3e-13	51.0	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|332798014|ref|YP_004459514.1|	-	3.1e-13	49.5	0.2	4.9e-13	48.9	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|332798014|ref|YP_004459514.1|	-	1.8e-11	44.5	0.0	3.6e-11	43.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|332798014|ref|YP_004459514.1|	-	2e-10	40.9	0.0	3.5e-10	40.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|332798014|ref|YP_004459514.1|	-	5.2e-09	36.4	0.0	1.1e-08	35.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|332798014|ref|YP_004459514.1|	-	7.6e-08	32.7	0.0	1.5e-07	31.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|332798014|ref|YP_004459514.1|	-	6.8e-07	29.3	0.0	1.1e-06	28.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|332798014|ref|YP_004459514.1|	-	7.6e-06	25.4	0.0	2e-05	24.0	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	small	domain
TehB	PF03848.9	gi|332798014|ref|YP_004459514.1|	-	8.5e-06	25.0	0.0	1.5e-05	24.3	0.0	1.4	1	1	0	1	1	1	1	Tellurite	resistance	protein	TehB
Ubie_methyltran	PF01209.13	gi|332798014|ref|YP_004459514.1|	-	1.2e-05	24.5	0.0	4.4e-05	22.7	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|332798014|ref|YP_004459514.1|	-	4.6e-05	22.6	0.0	8.8e-05	21.7	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_15	PF09445.5	gi|332798014|ref|YP_004459514.1|	-	0.0098	15.4	0.1	0.026	14.0	0.0	1.7	1	1	1	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
AdoMet_MTase	PF07757.8	gi|332798014|ref|YP_004459514.1|	-	0.056	13.5	0.1	0.16	12.0	0.1	1.8	1	1	0	1	1	1	0	Predicted	AdoMet-dependent	methyltransferase
Methyltransf_32	PF13679.1	gi|332798014|ref|YP_004459514.1|	-	0.097	12.3	0.0	0.19	11.4	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|332798014|ref|YP_004459514.1|	-	0.17	11.3	2.6	1.1	8.7	0.0	2.8	2	2	1	3	3	3	0	DNA	methylase
PadR	PF03551.9	gi|332798015|ref|YP_004459515.1|	-	3.1e-11	42.8	2.0	4.3e-11	42.4	1.4	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF4364	PF14277.1	gi|332798015|ref|YP_004459515.1|	-	0.01	15.4	0.1	0.016	14.8	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
RQC	PF09382.5	gi|332798015|ref|YP_004459515.1|	-	0.049	13.3	0.1	0.091	12.4	0.0	1.4	1	1	0	1	1	1	0	RQC	domain
HxlR	PF01638.12	gi|332798015|ref|YP_004459515.1|	-	0.056	13.0	0.1	0.068	12.8	0.1	1.2	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
ILVD_EDD	PF00920.16	gi|332798016|ref|YP_004459516.1|	-	1.8e-220	732.8	2.4	2e-220	732.6	1.6	1.0	1	0	0	1	1	1	1	Dehydratase	family
Semialdhyde_dh	PF01118.19	gi|332798017|ref|YP_004459517.1|	-	7e-32	110.2	0.0	1.8e-31	108.9	0.0	1.7	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|332798017|ref|YP_004459517.1|	-	5e-21	75.3	0.0	7.1e-21	74.8	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Coatomer_b_Cpla	PF14806.1	gi|332798018|ref|YP_004459518.1|	-	0.023	14.4	0.1	0.041	13.6	0.1	1.3	1	0	0	1	1	1	0	Coatomer	beta	subunit	appendage	platform
DUF1690	PF07956.6	gi|332798018|ref|YP_004459518.1|	-	0.17	11.8	0.2	0.17	11.8	0.1	2.2	3	0	0	3	3	3	0	Protein	of	Unknown	function	(DUF1690)
DUF4284	PF14112.1	gi|332798018|ref|YP_004459518.1|	-	1.2	9.6	7.0	0.47	10.9	1.3	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4284)
PAZ	PF02170.17	gi|332798019|ref|YP_004459519.1|	-	0.21	10.8	2.4	0.25	10.6	1.6	1.2	1	0	0	1	1	1	0	PAZ	domain
Peptidase_S8	PF00082.17	gi|332798020|ref|YP_004459520.1|	-	0.00021	20.5	0.0	0.00038	19.6	0.0	1.4	1	0	0	1	1	1	1	Subtilase	family
Pro-kuma_activ	PF09286.6	gi|332798020|ref|YP_004459520.1|	-	0.019	15.0	0.0	0.056	13.4	0.0	1.8	2	0	0	2	2	2	0	Pro-kumamolisin,	activation	domain
Iso_dh	PF00180.15	gi|332798022|ref|YP_004459522.1|	-	4.7e-102	341.4	0.2	5.7e-102	341.2	0.2	1.1	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
P22_Tail-4	PF11650.3	gi|332798022|ref|YP_004459522.1|	-	0.079	12.5	0.0	0.17	11.4	0.0	1.5	1	0	0	1	1	1	0	P22	tail	accessory	factor