# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- COX1 PF00115.20 CCF72180.1 - 1.6e-103 346.9 45.5 1.9e-103 346.7 45.5 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I Cytochrome_B PF00033.19 CCF72181.1 - 6.1e-48 163.2 25.8 6.1e-48 163.2 25.8 2.2 2 1 1 3 3 3 1 Cytochrome b/b6/petB Cytochrom_B_N_2 PF13631.6 CCF72181.1 - 7.4e-21 74.9 25.2 1.2e-20 74.2 13.0 2.8 3 0 0 3 3 3 2 Cytochrome b(N-terminal)/b6/petB Cytochrom_B_C PF00032.17 CCF72181.1 - 4.7e-14 52.5 2.9 4.7e-14 52.5 2.9 3.0 2 1 1 3 3 3 1 Cytochrome b(C-terminal)/b6/petD COX3 PF00510.18 CCF72182.1 - 3.2e-08 33.7 16.0 9.4e-08 32.2 15.3 1.9 1 1 0 1 1 1 1 Cytochrome c oxidase subunit III Col_cuticle_N PF01484.17 CCF72182.1 - 1.4 9.0 0.1 1.4 9.0 0.1 3.9 3 2 0 3 3 3 0 Nematode cuticle collagen N-terminal domain NPCC PF08058.11 CCF72182.1 - 3.8 7.6 5.4 2.6 8.1 0.1 2.6 1 1 1 2 2 2 0 Nuclear pore complex component DUF2070 PF09843.9 CCF72473.1 - 5.7 5.1 9.0 6.9 4.8 9.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 7TM_GPCR_Sri PF10327.9 CCF72474.1 - 0.013 14.7 0.2 0.016 14.4 0.2 1.1 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Sri DUF5305 PF17231.2 CCF72474.1 - 0.06 12.8 0.2 0.074 12.5 0.2 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5305) DUF4218 PF13960.6 CCF72476.1 - 0.007 16.0 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4218) SurA_N_2 PF13623.6 CCF72476.1 - 2.5 7.9 5.4 13 5.6 0.3 3.2 3 0 0 3 3 3 0 SurA N-terminal domain TPK_catalytic PF04263.16 CCF72478.1 - 2.5e-14 53.3 0.0 3.3e-14 53.0 0.0 1.1 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, catalytic domain TPK_B1_binding PF04265.14 CCF72478.1 - 4.7e-07 29.4 0.0 7.8e-07 28.7 0.0 1.3 1 0 0 1 1 1 1 Thiamin pyrophosphokinase, vitamin B1 binding domain Ldh_1_N PF00056.23 CCF72479.1 - 1.4e-48 164.6 0.3 2.5e-48 163.8 0.3 1.4 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 CCF72479.1 - 5.2e-21 75.3 0.0 1.2e-20 74.1 0.0 1.6 2 0 0 2 2 2 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 CCF72479.1 - 0.01 15.4 0.2 0.039 13.5 0.0 2.0 2 0 0 2 2 2 0 Family 4 glycosyl hydrolase Rad60-SLD PF11976.8 CCF72480.1 - 4.3e-25 87.3 0.1 4.9e-25 87.2 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 CCF72480.1 - 1e-12 47.6 0.1 1.2e-12 47.4 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin family Ubiquitin_5 PF18037.1 CCF72480.1 - 0.053 13.9 0.0 0.061 13.7 0.0 1.1 1 0 0 1 1 1 0 Ubiquitin-like domain UBX PF00789.20 CCF72480.1 - 0.092 13.0 0.0 0.12 12.6 0.0 1.3 1 1 0 1 1 1 0 UBX domain HEAT PF02985.22 CCF72482.1 - 1.2e-05 25.2 0.2 0.021 15.0 0.0 3.9 3 0 0 3 3 3 2 HEAT repeat Cnd1 PF12717.7 CCF72482.1 - 0.011 15.8 6.3 0.041 13.9 0.8 3.5 3 1 0 3 3 3 0 non-SMC mitotic condensation complex subunit 1 RabGAP-TBC PF00566.18 CCF72484.1 - 3.9e-51 173.8 5.0 4.8e-51 173.5 5.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Thioredoxin_8 PF13905.6 CCF72485.1 - 1.7e-33 114.8 0.1 1.4e-16 60.6 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin-like Thioredoxin_2 PF13098.6 CCF72485.1 - 0.018 15.5 0.0 6 7.4 0.0 2.6 2 0 0 2 2 2 0 Thioredoxin-like domain SEO_C PF14577.6 CCF72485.1 - 0.026 14.0 0.0 0.058 12.8 0.0 1.5 1 0 0 1 1 1 0 Sieve element occlusion C-terminus RRM_1 PF00076.22 CCF72488.1 - 1.6e-16 59.9 0.0 2e-16 59.5 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF72488.1 - 0.021 14.9 0.0 0.031 14.4 0.0 1.3 1 0 0 1 1 1 0 RNA recognition motif WD40 PF00400.32 CCF72490.1 - 5.2e-09 36.6 7.2 0.049 14.5 0.0 5.8 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72490.1 - 0.00019 21.6 0.0 0.18 12.1 0.0 3.0 2 0 0 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain zf-HC5HC2H_2 PF13832.6 CCF72490.1 - 0.003 17.7 1.4 0.0087 16.2 1.4 1.8 1 0 0 1 1 1 1 PHD-zinc-finger like domain PHD PF00628.29 CCF72490.1 - 0.15 12.0 6.3 0.13 12.2 4.0 2.3 2 0 0 2 2 2 0 PHD-finger C1_1 PF00130.22 CCF72490.1 - 0.36 10.7 8.8 0.06 13.3 3.7 2.4 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) UTP15_C PF09384.10 CCF72491.1 - 7.2e-20 71.2 0.3 1.3e-19 70.3 0.3 1.4 1 0 0 1 1 1 1 UTP15 C terminal WD40 PF00400.32 CCF72491.1 - 1.4e-18 66.8 4.5 0.00016 22.4 0.2 5.9 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72491.1 - 5.3e-09 36.3 0.0 0.011 16.0 0.0 4.4 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 CCF72491.1 - 1.1e-05 24.6 0.4 0.0074 15.3 0.0 2.8 2 1 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein tRNA-synt_1d PF00750.19 CCF72494.1 - 1.8e-52 178.4 0.6 3e-30 105.4 0.3 2.1 2 0 0 2 2 2 2 tRNA synthetases class I (R) DALR_1 PF05746.15 CCF72494.1 - 3.8e-17 62.6 0.0 1.3e-16 60.8 0.0 2.0 1 1 0 1 1 1 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 CCF72494.1 - 0.0042 17.6 0.0 0.018 15.6 0.0 2.1 2 0 0 2 2 2 1 Arginyl tRNA synthetase N terminal domain PseudoU_synth_2 PF00849.22 CCF72495.1 - 2.1e-25 89.7 0.0 3.1e-25 89.1 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase Tcf25 PF04910.14 CCF72496.1 - 6.6e-40 137.3 10.1 9.4e-40 136.7 10.1 1.2 1 0 0 1 1 1 1 Transcriptional repressor TCF25 Actin PF00022.19 CCF72497.1 - 1.7e-43 148.8 0.0 6.2e-43 146.9 0.0 1.9 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 CCF72497.1 - 0.046 12.5 0.0 1.8 7.3 0.0 2.3 2 0 0 2 2 2 0 MreB/Mbl protein FtsA PF14450.6 CCF72497.1 - 0.15 12.5 0.0 1.4 9.4 0.0 2.4 3 0 0 3 3 3 0 Cell division protein FtsA MBF1 PF08523.10 CCF72498.1 - 1.3e-12 48.0 1.2 3.3e-12 46.7 1.2 1.7 1 0 0 1 1 1 1 Multiprotein bridging factor 1 HTH_3 PF01381.22 CCF72498.1 - 2.3e-11 43.6 0.1 3.3e-11 43.0 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 CCF72498.1 - 1.6e-07 31.5 0.0 2.4e-07 31.0 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 CCF72498.1 - 3e-05 24.0 0.0 5.2e-05 23.2 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain polyprenyl_synt PF00348.17 CCF72499.1 - 3.1e-66 223.1 0.5 4e-66 222.7 0.5 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase TFIIF_beta_N PF17683.1 CCF72500.1 - 0.00012 22.8 0.0 0.00019 22.1 0.0 1.4 1 0 0 1 1 1 1 TFIIF, beta subunit N-terminus PyocinActivator PF11112.8 CCF72500.1 - 0.078 13.1 0.0 11 6.2 0.0 2.3 2 0 0 2 2 2 0 Pyocin activator protein PrtN HR1 PF02185.16 CCF72501.1 - 0.0048 17.0 0.5 0.0048 17.0 0.5 1.6 2 0 0 2 2 2 1 Hr1 repeat Nsp1_C PF05064.13 CCF72501.1 - 0.055 13.3 1.4 0.07 12.9 0.4 1.6 2 0 0 2 2 2 0 Nsp1-like C-terminal region FlxA PF14282.6 CCF72501.1 - 0.06 13.3 1.2 0.06 13.3 1.2 2.1 2 0 0 2 2 2 0 FlxA-like protein tRNA_lig_kinase PF08303.11 CCF72501.1 - 0.09 12.9 1.6 0.11 12.6 1.1 1.4 1 1 0 1 1 1 0 tRNA ligase kinase domain DUF948 PF06103.11 CCF72501.1 - 0.22 11.8 1.3 0.94 9.8 0.2 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) EELM2 PF15863.5 CCF72502.1 - 3.5e-64 216.0 6.2 1.4e-63 214.1 6.2 1.8 1 1 0 1 1 1 1 Extended EGL-27 and MTA1 homology domain Spo0M PF07070.11 CCF72502.1 - 0.04 13.5 0.1 0.06 12.9 0.1 1.2 1 0 0 1 1 1 0 SpoOM protein OTU PF02338.19 CCF72503.1 - 7.5e-24 84.6 0.1 1.2e-23 84.0 0.1 1.3 1 0 0 1 1 1 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 CCF72503.1 - 4.6e-05 23.0 1.2 0.12 11.8 0.1 2.2 1 1 1 2 2 2 2 Peptidase C65 Otubain Glycos_transf_2 PF00535.26 CCF72504.1 - 2.7e-34 118.4 0.0 3.2e-34 118.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 CCF72504.1 - 4.6e-12 46.3 0.0 5.5e-12 46.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 CCF72504.1 - 1.3e-08 34.6 0.1 1.8e-08 34.2 0.1 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 CCF72504.1 - 0.00011 21.8 0.0 0.00017 21.1 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 CCF72504.1 - 0.029 14.9 0.0 0.058 13.9 0.0 1.5 1 1 0 1 1 1 0 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 CCF72504.1 - 0.072 13.0 0.0 0.091 12.7 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family group 2 WEMBL PF05701.11 CCF72505.1 - 0.26 10.0 15.3 0.35 9.5 15.3 1.1 1 0 0 1 1 1 0 Weak chloroplast movement under blue light DUF848 PF05852.11 CCF72505.1 - 4 7.5 9.4 6.9 6.8 6.2 2.6 2 1 1 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) BAG PF02179.16 CCF72505.1 - 5.3 7.5 8.4 64 4.1 0.0 3.0 2 1 0 2 2 2 0 BAG domain ING PF12998.7 CCF72505.1 - 6.7 7.4 13.1 3.8 8.2 7.4 2.9 2 1 0 3 3 3 0 Inhibitor of growth proteins N-terminal histone-binding Asparaginase PF00710.20 CCF72506.1 - 0.15 11.6 0.0 0.36 10.4 0.0 1.6 1 0 0 1 1 1 0 Asparaginase, N-terminal TBCA PF02970.16 CCF72506.1 - 0.22 11.9 1.5 7.5 7.0 0.5 2.5 2 0 0 2 2 2 0 Tubulin binding cofactor A Bap31_Bap29_C PF18035.1 CCF72506.1 - 0.41 10.7 2.5 0.77 9.8 0.0 2.4 2 1 1 3 3 3 0 Bap31/Bap29 cytoplasmic coiled-coil domain WD40 PF00400.32 CCF72507.1 - 2e-25 88.6 34.3 3.9e-06 27.5 0.8 10.1 11 0 0 11 11 11 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72507.1 - 3.2e-10 40.2 0.2 0.0088 16.3 0.0 6.4 5 2 2 7 7 7 2 Anaphase-promoting complex subunit 4 WD40 domain PALB2_WD40 PF16756.5 CCF72507.1 - 0.4 9.5 7.5 4.1 6.2 0.2 3.9 4 1 1 5 5 5 0 Partner and localizer of BRCA2 WD40 domain ABC_tran PF00005.27 CCF72508.1 - 2.1e-32 112.5 0.0 3.6e-32 111.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CCF72508.1 - 2.6e-29 102.7 12.0 4.1e-29 102.1 12.0 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 CCF72508.1 - 1.9e-09 37.3 0.9 9.8e-08 31.7 0.9 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DEAD PF00270.29 CCF72508.1 - 0.00021 21.1 0.1 0.00044 20.1 0.1 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 CCF72508.1 - 0.004 17.4 0.1 0.024 14.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain DUF87 PF01935.17 CCF72508.1 - 0.0057 16.8 0.7 0.041 14.0 0.1 2.4 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_23 PF13476.6 CCF72508.1 - 0.0075 16.8 1.9 0.013 16.0 0.3 2.1 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 CCF72508.1 - 0.013 15.2 0.0 0.1 12.3 0.0 2.1 2 1 0 2 2 2 0 AAA ATPase domain AAA PF00004.29 CCF72508.1 - 0.015 15.7 0.1 0.17 12.3 0.1 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 CCF72508.1 - 0.017 14.8 0.0 0.041 13.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 CCF72508.1 - 0.022 14.4 0.2 0.037 13.7 0.2 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 CCF72508.1 - 0.028 14.5 0.1 0.38 10.8 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_16 PF13191.6 CCF72508.1 - 0.03 14.7 0.0 0.055 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 CCF72508.1 - 0.052 13.3 1.1 0.13 12.0 1.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CCF72508.1 - 0.093 12.6 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 CCF72508.1 - 0.15 12.1 0.1 1.3 9.0 0.1 2.2 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_18 PF13238.6 CCF72508.1 - 0.16 12.6 0.0 0.42 11.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CCF72508.1 - 0.16 12.2 0.0 0.41 10.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain Ank_4 PF13637.6 CCF72509.1 - 1.3e-16 60.7 0.2 2.5e-13 50.2 0.1 1.7 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank PF00023.30 CCF72509.1 - 7.5e-15 54.6 0.4 2.9e-07 30.6 0.2 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_5 PF13857.6 CCF72509.1 - 3.2e-13 49.6 0.4 3.2e-08 33.7 0.0 2.4 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 CCF72509.1 - 4.6e-13 49.6 0.0 6.3e-13 49.1 0.0 1.5 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_3 PF13606.6 CCF72509.1 - 9.8e-12 44.0 0.2 1.2e-05 25.3 0.2 2.6 2 0 0 2 2 2 2 Ankyrin repeat IF4E PF01652.18 CCF72510.1 - 6e-26 91.2 0.3 9.7e-26 90.5 0.3 1.3 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E NAS PF03059.16 CCF72510.1 - 0.051 12.9 0.0 0.078 12.3 0.0 1.2 1 0 0 1 1 1 0 Nicotianamine synthase protein ANAPC4_WD40 PF12894.7 CCF72511.1 - 0.00044 20.5 0.0 18 5.7 0.0 3.6 2 1 1 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF72511.1 - 0.0027 18.5 0.1 64 4.6 0.0 4.1 4 0 0 4 4 4 0 WD domain, G-beta repeat NSP16 PF06460.12 CCF72511.1 - 0.036 13.2 0.1 0.053 12.6 0.1 1.2 1 0 0 1 1 1 0 Coronavirus NSP16 Vps39_2 PF10367.9 CCF72511.1 - 0.037 14.5 0.0 0.068 13.6 0.0 1.4 1 0 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 Ephrin_rec_like PF07699.13 CCF72512.1 - 2.7e-25 87.8 107.4 3.1e-08 33.2 3.4 12.7 11 2 1 12 12 12 9 Putative ephrin-receptor like MAR_sialic_bdg PF10564.9 CCF72512.1 - 0.076 13.1 10.4 0.36 10.9 1.5 3.6 3 0 0 3 3 3 0 Sialic-acid binding micronemal adhesive repeat hEGF PF12661.7 CCF72512.1 - 3.4 8.4 42.0 0.26 12.0 1.6 9.9 9 0 0 9 9 9 0 Human growth factor-like EGF Ephrin_rec_like PF07699.13 CCF72513.1 - 1e-26 92.4 107.8 2.2e-08 33.7 3.4 12.7 11 2 1 12 12 12 9 Putative ephrin-receptor like hEGF PF12661.7 CCF72513.1 - 0.2 12.4 41.3 0.19 12.4 1.6 10.0 9 0 0 9 9 9 0 Human growth factor-like EGF DAP3 PF10236.9 CCF72513.1 - 0.33 10.1 4.2 0.56 9.3 0.2 2.7 3 0 0 3 3 3 0 Mitochondrial ribosomal death-associated protein 3 GTP_EFTU PF00009.27 CCF72514.1 - 3.8e-50 170.1 0.6 5.7e-50 169.6 0.6 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 CCF72514.1 - 3.1e-33 114.1 0.3 7.6e-33 112.9 0.3 1.7 1 1 0 1 1 1 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 CCF72514.1 - 5.5e-19 68.0 0.0 1.5e-18 66.6 0.0 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus MMR_HSR1 PF01926.23 CCF72514.1 - 7.3e-06 26.0 0.2 1.4e-05 25.1 0.2 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 CCF72514.1 - 5.7e-05 22.8 0.0 0.00016 21.3 0.0 1.7 1 0 0 1 1 1 1 Ras family EFG_II PF14492.6 CCF72514.1 - 0.00021 21.3 0.0 0.00068 19.7 0.0 1.8 1 1 0 1 1 1 1 Elongation Factor G, domain II PduV-EutP PF10662.9 CCF72514.1 - 0.011 15.5 0.2 0.037 13.8 0.3 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Roc PF08477.13 CCF72514.1 - 0.018 15.2 0.2 0.15 12.3 0.0 2.5 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase RF3_C PF16658.5 CCF72514.1 - 0.022 14.6 0.0 0.046 13.6 0.0 1.4 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Zap1_zf2 PF18217.1 CCF72514.1 - 1.9 8.5 4.1 1.5 8.9 0.7 2.5 2 0 0 2 2 2 0 Zap1 zinc finger 2 IceA2 PF05862.11 CCF72515.1 - 0.01 15.7 0.0 0.025 14.5 0.0 1.6 1 0 0 1 1 1 0 Helicobacter pylori IceA2 protein Cytochrom_C1 PF02167.15 CCF72516.1 - 6.2e-89 297.5 0.0 8.5e-89 297.0 0.0 1.2 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 CCF72516.1 - 0.0014 18.9 0.0 0.0037 17.5 0.0 1.8 2 0 0 2 2 2 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C PF00034.21 CCF72516.1 - 0.011 16.9 0.0 0.036 15.2 0.0 2.0 1 0 0 1 1 1 0 Cytochrome c Gp_dh_C PF02800.20 CCF72517.1 - 6.2e-66 220.8 0.0 8.6e-66 220.4 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 CCF72517.1 - 1.9e-37 127.7 0.0 4e-37 126.6 0.0 1.6 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 CCF72517.1 - 0.025 14.7 0.0 0.083 13.0 0.0 2.0 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ADH_zinc_N PF00107.26 CCF72517.1 - 0.034 14.1 0.1 0.34 10.9 0.0 2.4 2 1 0 2 2 2 0 Zinc-binding dehydrogenase AAA PF00004.29 CCF72518.1 - 7.4e-14 52.3 0.0 9.7e-14 51.9 0.0 1.2 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 CCF72518.1 - 0.00022 20.9 0.0 0.00059 19.5 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain NACHT PF05729.12 CCF72518.1 - 0.00059 19.8 0.0 0.0039 17.1 0.0 2.1 1 1 0 1 1 1 1 NACHT domain ABC_tran PF00005.27 CCF72518.1 - 0.00085 19.9 0.2 0.0016 19.0 0.2 1.4 1 0 0 1 1 1 1 ABC transporter AAA_18 PF13238.6 CCF72518.1 - 0.00093 19.8 0.0 0.0015 19.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CCF72518.1 - 0.0016 18.7 0.2 0.0045 17.3 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CCF72518.1 - 0.0026 18.1 0.0 0.0067 16.8 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_15 PF13175.6 CCF72518.1 - 0.0028 17.4 1.2 0.0049 16.6 0.7 1.6 1 1 0 1 1 1 1 AAA ATPase domain ATP_bind_1 PF03029.17 CCF72518.1 - 0.003 17.4 0.6 0.1 12.4 0.0 2.1 1 1 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 CCF72518.1 - 0.004 16.9 0.1 0.0087 15.8 0.1 1.6 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 CCF72518.1 - 0.006 17.1 1.3 0.011 16.2 1.3 1.6 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CCF72518.1 - 0.0076 16.6 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CCF72518.1 - 0.011 15.9 0.1 0.014 15.5 0.1 1.3 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CCF72518.1 - 0.012 16.0 0.0 0.034 14.5 0.0 1.9 1 1 1 2 2 1 0 RNA helicase AAA_30 PF13604.6 CCF72518.1 - 0.013 15.3 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CCF72518.1 - 0.014 15.6 0.1 0.024 14.9 0.1 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 CCF72518.1 - 0.017 14.7 0.0 0.028 14.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain FtsK_SpoIIIE PF01580.18 CCF72518.1 - 0.018 14.4 0.0 0.035 13.5 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family PduV-EutP PF10662.9 CCF72518.1 - 0.018 14.8 0.0 0.039 13.7 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_11 PF13086.6 CCF72518.1 - 0.02 14.7 0.0 0.027 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 CCF72518.1 - 0.02 14.5 1.1 0.031 13.9 0.1 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 CCF72518.1 - 0.02 14.8 0.1 0.05 13.5 0.0 1.6 2 0 0 2 2 2 0 RsgA GTPase AAA_7 PF12775.7 CCF72518.1 - 0.024 14.2 0.0 0.046 13.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_21 PF13304.6 CCF72518.1 - 0.038 13.8 0.0 0.057 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 CCF72518.1 - 0.042 13.9 0.1 0.14 12.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CCF72518.1 - 0.058 12.8 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 CCF72518.1 - 0.071 13.0 0.1 0.16 11.9 0.0 1.7 2 0 0 2 2 2 0 Rad17 P-loop domain SMC_N PF02463.19 CCF72518.1 - 0.098 12.1 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain Viral_helicase1 PF01443.18 CCF72518.1 - 0.11 12.2 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Ploopntkinase3 PF18751.1 CCF72518.1 - 0.11 12.3 0.0 0.17 11.8 0.0 1.2 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 ATPase PF06745.13 CCF72518.1 - 0.16 11.3 0.4 0.43 9.9 0.0 1.8 2 1 1 3 3 3 0 KaiC T2SSE PF00437.20 CCF72518.1 - 0.16 11.0 0.0 0.27 10.3 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_ATPase PF09818.9 CCF72518.1 - 0.18 10.6 0.0 0.28 10.0 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class AAA_17 PF13207.6 CCF72518.1 - 0.22 12.0 0.0 0.69 10.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain Rep_fac_C PF08542.11 CCF72519.1 - 3.1e-18 66.0 0.3 8.6e-18 64.5 0.3 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 CCF72519.1 - 5.4e-15 56.0 0.0 1.5e-14 54.6 0.0 1.8 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 CCF72519.1 - 3e-11 43.4 0.0 3e-09 36.8 0.0 2.4 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rad17 PF03215.15 CCF72519.1 - 2.5e-09 37.3 0.1 7.4e-09 35.8 0.0 1.7 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_30 PF13604.6 CCF72519.1 - 8.2e-07 28.9 0.0 1.4e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 CCF72519.1 - 1.2e-06 28.7 0.4 4.3e-06 27.0 0.1 2.0 2 0 0 2 2 2 1 AAA C-terminal domain AAA_16 PF13191.6 CCF72519.1 - 4.2e-06 27.3 0.0 2.4e-05 24.8 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_11 PF13086.6 CCF72519.1 - 2.8e-05 24.0 0.2 0.00017 21.5 0.1 2.0 1 1 1 2 2 2 1 AAA domain AAA_22 PF13401.6 CCF72519.1 - 4.6e-05 23.7 0.4 0.00076 19.8 0.2 2.7 2 1 0 2 2 2 1 AAA domain AAA_14 PF13173.6 CCF72519.1 - 0.00034 20.7 0.0 0.00067 19.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CCF72519.1 - 0.00047 20.5 0.1 0.0031 17.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 CCF72519.1 - 0.00068 19.4 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 CCF72519.1 - 0.0012 18.9 0.0 0.016 15.2 0.0 2.1 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit DUF2075 PF09848.9 CCF72519.1 - 0.0013 18.0 0.2 0.0032 16.8 0.2 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) RuvB_N PF05496.12 CCF72519.1 - 0.0042 16.8 0.4 0.018 14.8 0.0 2.3 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 CCF72519.1 - 0.0071 15.5 0.0 0.017 14.3 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 CCF72519.1 - 0.0089 16.0 0.0 0.029 14.4 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) TIP49 PF06068.13 CCF72519.1 - 0.011 15.0 0.1 0.062 12.5 0.0 2.0 2 1 0 2 2 2 0 TIP49 P-loop domain AAA_18 PF13238.6 CCF72519.1 - 0.015 15.9 0.0 0.041 14.4 0.0 1.8 2 0 0 2 2 1 0 AAA domain ATPase_2 PF01637.18 CCF72519.1 - 0.015 15.2 0.3 0.043 13.7 0.0 1.8 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 CCF72519.1 - 0.019 14.5 0.0 0.046 13.2 0.0 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region TK PF00265.18 CCF72519.1 - 0.02 14.8 0.0 0.058 13.2 0.0 1.7 2 0 0 2 2 2 0 Thymidine kinase AAA_3 PF07726.11 CCF72519.1 - 0.023 14.6 0.0 0.076 12.9 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 CCF72519.1 - 0.027 14.2 0.1 0.33 10.7 0.0 2.3 1 1 1 2 2 2 0 DEAD/DEAH box helicase AAA_23 PF13476.6 CCF72519.1 - 0.049 14.1 0.3 0.11 12.9 0.3 1.8 1 1 0 1 1 1 0 AAA domain DNA_pol3_delta PF06144.13 CCF72519.1 - 0.052 13.3 0.2 0.11 12.3 0.0 1.6 2 0 0 2 2 1 0 DNA polymerase III, delta subunit Torsin PF06309.11 CCF72519.1 - 0.058 13.5 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Torsin TniB PF05621.11 CCF72519.1 - 0.072 12.5 0.0 7.1 6.0 0.0 2.4 2 0 0 2 2 2 0 Bacterial TniB protein Lac_bphage_repr PF06543.12 CCF72519.1 - 0.091 12.8 0.5 0.39 10.7 0.0 2.2 3 0 0 3 3 2 0 Lactococcus bacteriophage repressor AAA_28 PF13521.6 CCF72519.1 - 0.16 12.2 0.0 0.32 11.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain Gp_dh_C PF02800.20 CCF72520.1 - 6.2e-66 220.8 0.0 8.6e-66 220.4 0.0 1.2 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 CCF72520.1 - 1.9e-37 127.7 0.0 4e-37 126.6 0.0 1.6 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DapB_N PF01113.20 CCF72520.1 - 0.025 14.7 0.0 0.083 13.0 0.0 2.0 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus ADH_zinc_N PF00107.26 CCF72520.1 - 0.034 14.1 0.1 0.34 10.9 0.0 2.4 2 1 0 2 2 2 0 Zinc-binding dehydrogenase IF3_C PF00707.22 CCF72521.1 - 0.00098 19.0 0.0 0.0023 17.8 0.0 1.6 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain WD40 PF00400.32 CCF72522.1 - 0.00053 20.7 1.0 0.17 12.8 0.3 4.4 3 0 0 3 3 3 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72522.1 - 0.0062 16.8 0.2 0.07 13.4 0.0 2.9 4 0 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Cnd1 PF12717.7 CCF72524.1 - 2.1e-29 102.7 11.4 5.2e-28 98.1 1.2 3.7 3 0 0 3 3 3 2 non-SMC mitotic condensation complex subunit 1 Adaptin_N PF01602.20 CCF72524.1 - 1.6e-05 23.7 0.4 1.6e-05 23.7 0.4 1.9 2 0 0 2 2 2 1 Adaptin N terminal region WD40 PF00400.32 CCF72525.1 - 6.1e-11 42.7 13.4 0.00096 19.9 0.1 6.6 7 0 0 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72525.1 - 3.3e-07 30.5 0.1 0.21 11.9 0.0 4.3 3 1 0 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 CCF72525.1 - 0.067 11.8 0.0 0.12 10.9 0.0 1.4 1 0 0 1 1 1 0 Nucleoporin Nup120/160 zf-tcix PF14952.6 CCF72525.1 - 0.08 12.6 2.3 0.24 11.0 2.3 1.8 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding DUF974 PF06159.13 CCF72527.1 - 0.00055 19.8 0.0 0.00077 19.3 0.0 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF974) MFAP1 PF06991.11 CCF72528.1 - 2.3e-50 171.4 12.6 4.5e-50 170.5 12.6 1.5 1 0 0 1 1 1 1 Microfibril-associated/Pre-mRNA processing Peptidase_S9_N PF02897.15 CCF72529.1 - 2.6e-11 43.0 0.7 3.7e-11 42.5 0.7 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain VWA_2 PF13519.6 CCF72530.1 - 1.7e-13 51.1 0.1 5.9e-13 49.4 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain Ssl1 PF04056.14 CCF72530.1 - 7e-06 26.0 0.4 1.7e-05 24.7 0.1 1.7 2 0 0 2 2 2 1 Ssl1-like Proteasome PF00227.26 CCF72531.1 - 1.6e-32 112.6 0.2 2.1e-32 112.2 0.2 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 CCF72531.1 - 6.4e-12 44.9 0.0 1.2e-11 44.0 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Pox_Ag35 PF03286.14 CCF72531.1 - 0.032 14.0 0.0 0.05 13.4 0.0 1.2 1 0 0 1 1 1 0 Pox virus Ag35 surface protein tRNA-synt_1b PF00579.25 CCF72532.1 - 1.5e-46 159.1 0.0 1.7e-46 158.9 0.0 1.0 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) XRN_M PF17846.1 CCF72533.1 - 1.8e-97 327.1 10.5 9.4e-71 239.1 3.0 2.5 2 1 1 3 3 3 2 Xrn1 helical domain XRN_N PF03159.18 CCF72533.1 - 3.5e-94 314.8 0.0 6.4e-94 313.9 0.0 1.4 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus IBN_N PF03810.19 CCF72534.1 - 3.9e-05 23.5 1.0 0.0028 17.5 0.3 3.3 3 0 0 3 3 3 1 Importin-beta N-terminal domain DUF2383 PF09537.10 CCF72534.1 - 0.1 12.9 0.1 0.48 10.8 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF2383) DUF2767 PF10965.8 CCF72534.1 - 0.19 11.8 0.0 0.61 10.1 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2767) RIH_assoc PF08454.11 CCF72534.1 - 2.4 8.1 9.5 0.64 9.9 0.2 4.2 4 1 0 4 4 4 0 RyR and IP3R Homology associated CSTF_C PF14304.6 CCF72534.1 - 3.1 7.5 9.5 4.4 7.0 0.7 3.3 4 0 0 4 4 4 0 Transcription termination and cleavage factor C-terminal DSHCT PF08148.12 CCF72535.1 - 9e-43 145.8 0.0 1.8e-42 144.8 0.0 1.5 1 0 0 1 1 1 1 DSHCT (NUC185) domain DEAD PF00270.29 CCF72535.1 - 1.1e-18 67.6 0.0 3.8e-18 65.9 0.0 2.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 CCF72535.1 - 3.3e-08 33.7 0.0 7.6e-08 32.5 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CCF72535.1 - 1.3e-06 28.7 0.2 9.1e-06 26.0 0.2 2.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain DUF3516 PF12029.8 CCF72535.1 - 0.069 12.2 0.3 0.12 11.4 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3516) LSM PF01423.22 CCF72537.1 - 3.1e-11 42.8 0.2 4e-11 42.5 0.2 1.2 1 0 0 1 1 1 1 LSM domain CinA PF02464.17 CCF72537.1 - 0.03 13.9 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Competence-damaged protein RINGv PF12906.7 CCF72538.1 - 1.6e-13 50.6 6.2 3.7e-13 49.4 6.2 1.7 1 0 0 1 1 1 1 RING-variant domain FHA PF00498.26 CCF72538.1 - 1.5e-10 41.3 0.1 1.8e-09 37.8 0.1 2.5 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 CCF72538.1 - 2.2e-08 34.3 0.0 1.1e-07 32.1 0.0 2.1 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain Tom37_C PF11801.8 CCF72539.1 - 0.11 12.5 0.1 0.54 10.2 0.0 2.1 2 0 0 2 2 2 0 Tom37 C-terminal domain YqzE PF14038.6 CCF72541.1 - 0.0044 17.0 0.4 0.0077 16.2 0.4 1.3 1 0 0 1 1 1 1 YqzE-like protein DUF148 PF02520.17 CCF72542.1 - 0.03 14.4 0.0 0.098 12.8 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function DUF148 PseudoU_synth_1 PF01416.20 CCF72543.1 - 5.1e-27 94.5 0.0 1.4e-23 83.4 0.0 2.2 2 0 0 2 2 2 2 tRNA pseudouridine synthase MMtag PF10159.9 CCF72544.1 - 3e-20 72.3 2.4 3e-20 72.3 2.4 3.0 2 1 0 2 2 2 1 Multiple myeloma tumor-associated UK PF02512.14 CCF72544.1 - 0.063 13.8 0.2 0.13 12.8 0.2 1.4 1 0 0 1 1 1 0 Virulence determinant AAR2 PF05282.11 CCF72545.1 - 4.7e-45 154.5 0.0 5.3e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 AAR2 protein ANAPC4_WD40 PF12894.7 CCF72546.1 - 0.0014 18.9 0.0 0.15 12.3 0.0 3.2 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain DUF2206 PF09971.9 CCF72548.1 - 0.022 13.5 0.1 0.04 12.7 0.1 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2206) SecG PF03840.14 CCF72548.1 - 0.12 12.5 0.0 0.46 10.6 0.0 1.9 2 0 0 2 2 2 0 Preprotein translocase SecG subunit CelTOS PF18659.1 CCF72550.1 - 0.013 15.9 1.5 0.013 15.9 1.5 2.8 2 0 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites KIP1 PF07765.12 CCF72550.1 - 0.068 13.3 0.4 35 4.6 0.2 3.4 2 0 0 2 2 2 0 KIP1-like protein DnaJ PF00226.31 CCF72552.1 - 6.7e-15 55.0 0.8 6.7e-15 55.0 0.8 2.2 2 0 0 2 2 2 1 DnaJ domain DUF1980 PF09323.10 CCF72552.1 - 0.56 10.1 2.7 1.3 8.9 2.7 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF1980) UQ_con PF00179.26 CCF72553.1 - 5.1e-15 55.4 0.0 5.5e-15 55.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 CCF72553.1 - 0.1 12.4 0.0 0.16 11.8 0.0 1.3 1 1 0 1 1 1 0 UEV domain NIF PF03031.18 CCF72554.1 - 9.2e-55 184.7 0.5 1.3e-54 184.2 0.5 1.2 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DUF2608 PF11019.8 CCF72554.1 - 0.062 12.8 0.0 0.094 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2608) LepB_GAP_N PF18172.1 CCF72554.1 - 0.086 12.7 0.0 1.2 9.0 0.0 2.1 2 0 0 2 2 2 0 LepB GAP domain N-terminal subdomain HAD PF12710.7 CCF72554.1 - 0.12 12.8 0.1 1.8 8.9 0.0 2.1 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CCF72554.1 - 0.16 12.2 0.1 22 5.3 0.2 2.1 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase Mcl1_mid PF12341.8 CCF72555.1 - 1.1e-17 64.4 0.0 3.3e-17 62.8 0.0 1.9 2 0 0 2 2 2 1 Minichromosome loss protein, Mcl1, middle region DUF4665 PF15679.5 CCF72557.1 - 0.03 14.9 0.3 0.03 14.9 0.3 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4665) BRE1 PF08647.11 CCF72557.1 - 0.37 10.9 6.0 0.13 12.4 1.8 2.2 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Hexapep_2 PF14602.6 CCF72558.1 - 7.9e-06 25.5 12.7 14 5.5 0.1 6.8 7 0 0 7 7 7 5 Hexapeptide repeat of succinyl-transferase Apocytochr_F_C PF01333.19 CCF72558.1 - 0.41 10.7 1.5 6.8 6.8 0.1 2.8 1 1 1 2 2 2 0 Apocytochrome F, C-terminal GTP_EFTU PF00009.27 CCF72559.1 - 2.3e-33 115.4 0.0 4.3e-33 114.5 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 CCF72559.1 - 2.3e-19 69.2 0.0 4.7e-19 68.2 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_IV PF03764.18 CCF72559.1 - 3.5e-18 65.5 0.0 6.8e-18 64.6 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV EFTUD2 PF16004.5 CCF72559.1 - 4.8e-12 46.5 10.7 1.9e-05 25.3 2.9 2.3 1 1 1 2 2 2 2 116 kDa U5 small nuclear ribonucleoprotein component N-terminus GTP_EFTU_D2 PF03144.25 CCF72559.1 - 1.9e-07 31.4 0.0 4.5e-07 30.2 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 CCF72559.1 - 0.0022 18.0 0.0 0.0046 17.0 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II NOA36 PF06524.12 CCF72559.1 - 0.48 9.7 2.0 0.91 8.8 2.0 1.4 1 0 0 1 1 1 0 NOA36 protein zf-CCCH PF00642.24 CCF72560.1 - 3.6e-05 23.5 1.8 9.7e-05 22.2 1.8 1.8 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) NUFIP1 PF10453.9 CCF72560.1 - 0.0021 17.9 0.2 0.0075 16.1 0.2 1.9 1 0 0 1 1 1 1 Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) zf_CCCH_4 PF18345.1 CCF72560.1 - 0.0028 17.7 5.8 0.007 16.4 5.8 1.8 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH_4 PF18044.1 CCF72560.1 - 0.005 16.6 2.2 0.013 15.3 2.2 1.7 1 0 0 1 1 1 1 CCCH-type zinc finger zf-C2H2_3rep PF18868.1 CCF72560.1 - 0.0058 17.3 5.7 0.014 16.1 5.7 1.6 1 0 0 1 1 1 1 Zinc finger C2H2-type, 3 repeats zf-C2H2_4 PF13894.6 CCF72560.1 - 0.0059 17.3 3.8 0.013 16.3 0.7 3.0 2 0 0 2 2 2 1 C2H2-type zinc finger zf-C2H2 PF00096.26 CCF72560.1 - 0.011 16.2 2.2 0.035 14.6 1.0 2.7 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-C2H2_6 PF13912.6 CCF72560.1 - 0.014 15.3 0.7 0.044 13.8 0.7 1.9 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2_jaz PF12171.8 CCF72560.1 - 0.041 14.2 2.7 0.041 14.2 2.7 2.3 2 0 0 2 2 2 0 Zinc-finger double-stranded RNA-binding C1_2 PF03107.16 CCF72560.1 - 0.22 11.9 4.5 0.76 10.1 2.0 2.7 2 0 0 2 2 2 0 C1 domain DUF2502 PF10697.9 CCF72560.1 - 5.7 7.4 8.5 1.4 9.4 4.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2502) WD40 PF00400.32 CCF72565.1 - 2.2e-35 120.1 18.5 3.5e-05 24.5 0.1 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72565.1 - 4.1e-11 43.0 0.2 0.24 11.7 0.0 5.7 3 1 3 6 6 6 5 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 CCF72565.1 - 0.00093 18.2 0.1 2 7.3 0.0 3.7 2 1 2 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 CCF72565.1 - 0.0016 17.2 0.2 1.4 7.5 0.0 2.6 2 1 0 2 2 2 2 Nucleoporin Nup120/160 DUF4221 PF13970.6 CCF72565.1 - 0.08 12.5 0.2 1.5 8.3 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4221) AAA PF00004.29 CCF72566.1 - 2.9e-41 141.0 0.0 6.1e-41 139.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF72566.1 - 1.2e-10 41.0 0.1 3e-10 39.7 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 CCF72566.1 - 2e-06 27.9 0.1 3.3e-05 23.9 0.1 2.6 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF72566.1 - 2.8e-06 27.8 0.0 0.001 19.5 0.0 2.8 2 1 1 3 3 3 1 AAA ATPase domain AAA_2 PF07724.14 CCF72566.1 - 6e-06 26.5 0.0 1.3e-05 25.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 CCF72566.1 - 3.5e-05 23.6 0.0 7.5e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Prot_ATP_ID_OB PF16450.5 CCF72566.1 - 4.9e-05 23.2 0.0 9.7e-05 22.3 0.0 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_24 PF13479.6 CCF72566.1 - 0.00012 21.8 0.1 0.014 15.1 0.0 2.5 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CCF72566.1 - 0.00019 21.7 0.1 0.018 15.3 0.0 2.5 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 CCF72566.1 - 0.0011 18.2 0.1 0.0037 16.5 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF815) RNA_helicase PF00910.22 CCF72566.1 - 0.0021 18.4 0.0 0.0056 17.1 0.0 1.7 1 0 0 1 1 1 1 RNA helicase TIP49 PF06068.13 CCF72566.1 - 0.0023 17.2 0.0 0.0054 16.0 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain IstB_IS21 PF01695.17 CCF72566.1 - 0.0025 17.6 0.0 0.0064 16.2 0.0 1.7 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_18 PF13238.6 CCF72566.1 - 0.0044 17.6 0.4 0.014 16.0 0.0 2.1 2 1 0 2 2 2 1 AAA domain Mg_chelatase PF01078.21 CCF72566.1 - 0.0049 16.3 0.1 0.0097 15.3 0.1 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI HMMR_C PF15908.5 CCF72566.1 - 0.0059 16.9 1.1 0.011 16.0 1.1 1.3 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor C-terminal AAA_7 PF12775.7 CCF72566.1 - 0.0077 15.8 0.0 0.015 14.8 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 CCF72566.1 - 0.012 15.4 0.0 0.047 13.4 0.0 2.0 2 1 1 3 3 2 0 Sigma-54 interaction domain AAA_3 PF07726.11 CCF72566.1 - 0.014 15.2 0.0 0.029 14.2 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_11 PF13086.6 CCF72566.1 - 0.016 15.0 0.1 0.32 10.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain ATPase PF06745.13 CCF72566.1 - 0.016 14.5 0.1 0.24 10.7 0.0 2.4 2 0 0 2 2 2 0 KaiC AAA_14 PF13173.6 CCF72566.1 - 0.017 15.1 0.0 0.045 13.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 CCF72566.1 - 0.019 15.0 0.0 0.037 14.0 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 CCF72566.1 - 0.02 15.0 0.0 0.074 13.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 CCF72566.1 - 0.029 14.6 0.0 0.054 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain IMD PF08397.11 CCF72566.1 - 0.041 13.3 1.2 0.11 11.9 1.2 1.7 1 0 0 1 1 1 0 IRSp53/MIM homology domain Prot_ATP_OB_N PF17758.1 CCF72566.1 - 0.045 13.4 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 Proteasomal ATPase OB N-terminal domain Parvo_NS1 PF01057.17 CCF72566.1 - 0.049 12.7 0.0 0.09 11.9 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF4164 PF13747.6 CCF72566.1 - 0.049 13.9 1.5 0.069 13.4 0.2 2.0 2 0 0 2 2 1 0 Domain of unknown function (DUF4164) PhoH PF02562.16 CCF72566.1 - 0.056 12.9 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein MAT1 PF06391.13 CCF72566.1 - 0.068 13.0 1.9 1.2 8.9 0.1 2.3 2 0 0 2 2 2 0 CDK-activating kinase assembly factor MAT1 AAA_25 PF13481.6 CCF72566.1 - 0.072 12.7 0.1 0.21 11.1 0.0 1.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 CCF72566.1 - 0.09 12.7 0.0 0.45 10.4 0.0 2.1 2 0 0 2 2 2 0 NACHT domain Cauli_DNA-bind PF03310.13 CCF72566.1 - 0.14 12.2 0.9 0.35 10.9 0.9 1.6 1 0 0 1 1 1 0 Caulimovirus DNA-binding protein Med4 PF10018.9 CCF72566.1 - 0.27 10.9 2.4 0.31 10.7 0.9 1.8 2 0 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 TMF_DNA_bd PF12329.8 CCF72566.1 - 2.2 8.3 7.0 1.1 9.4 4.5 1.7 2 0 0 2 2 1 0 TATA element modulatory factor 1 DNA binding HEAT PF02985.22 CCF72569.1 - 0.0023 18.0 2.7 0.84 10.1 0.3 4.4 4 0 0 4 4 4 2 HEAT repeat RICTOR_M PF14666.6 CCF72569.1 - 0.27 11.0 3.3 4.2 7.2 0.0 4.6 4 0 0 4 4 4 0 Rapamycin-insensitive companion of mTOR, middle domain Got1 PF04178.12 CCF72570.1 - 7.8e-11 42.4 17.1 9.8e-11 42.1 17.1 1.2 1 0 0 1 1 1 1 Got1/Sft2-like family SNAPc_SNAP43 PF09808.9 CCF72570.1 - 0.2 11.6 0.5 0.28 11.1 0.5 1.1 1 0 0 1 1 1 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 DUF2157 PF09925.9 CCF72570.1 - 8.1 6.2 10.9 13 5.6 10.9 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2157) Rrn6 PF10214.9 CCF72572.1 - 0.63 8.5 7.5 0.91 7.9 7.5 1.2 1 0 0 1 1 1 0 RNA polymerase I-specific transcription-initiation factor BST2 PF16716.5 CCF72572.1 - 2.7 8.6 17.0 0.3 11.7 3.5 3.6 1 1 2 4 4 4 0 Bone marrow stromal antigen 2 INCENP_ARK-bind PF03941.15 CCF72573.1 - 0.0078 16.1 1.9 0.013 15.4 0.0 2.3 2 0 0 2 2 2 1 Inner centromere protein, ARK binding region RBFA PF02033.18 CCF72574.1 - 1.6e-11 44.6 0.0 3.7e-11 43.4 0.0 1.6 1 0 0 1 1 1 1 Ribosome-binding factor A RTT107_BRCT_5 PF16770.5 CCF72577.1 - 0.0013 18.6 0.3 0.0024 17.7 0.0 1.9 2 1 0 2 2 2 1 Regulator of Ty1 transposition protein 107 BRCT domain MMR_HSR1 PF01926.23 CCF72578.1 - 1e-14 54.6 0.0 3.6e-14 52.8 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF72578.1 - 3.5e-06 26.6 0.0 7.1e-06 25.6 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B AIG1 PF04548.16 CCF72578.1 - 5.5e-05 22.6 0.0 0.00017 21.0 0.0 1.8 2 0 0 2 2 2 1 AIG1 family Dynamin_N PF00350.23 CCF72578.1 - 0.00039 20.5 0.2 0.041 13.9 0.0 3.6 3 2 2 5 5 5 1 Dynamin family AAA_18 PF13238.6 CCF72578.1 - 0.014 16.0 0.1 0.045 14.3 0.0 1.9 2 1 0 2 2 2 0 AAA domain Roc PF08477.13 CCF72578.1 - 0.1 12.8 0.0 0.28 11.4 0.0 1.8 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Acetyltransf_1 PF00583.25 CCF72579.1 - 7.1e-05 23.0 0.0 8.4e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Eaf7 PF07904.13 CCF72579.1 - 0.3 11.5 1.6 1.8 9.0 0.2 2.2 2 0 0 2 2 2 0 Chromatin modification-related protein EAF7 Ribosomal_S10 PF00338.22 CCF72580.1 - 1.4e-22 79.8 0.0 1.9e-22 79.3 0.0 1.3 1 1 0 1 1 1 1 Ribosomal protein S10p/S20e IMCp PF12314.8 CCF72581.1 - 2e-29 101.7 50.1 1.3e-27 95.9 39.0 2.5 1 1 1 2 2 2 2 Inner membrane complex protein ComX PF05952.12 CCF72581.1 - 7.9 6.5 13.2 1.3 9.0 0.7 3.3 3 1 0 3 3 3 0 Bacillus competence pheromone ComX MKT1_C PF12246.8 CCF72582.1 - 2.3e-19 69.6 2.7 2.4e-19 69.6 0.4 2.0 2 0 0 2 2 2 1 Temperature dependent protein affecting M2 dsRNA replication MKT1_N PF12247.8 CCF72582.1 - 9.2e-12 45.2 0.0 2.2e-11 43.9 0.0 1.6 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication XPG_I PF00867.18 CCF72582.1 - 1.5e-05 25.2 0.0 3.4e-05 24.1 0.0 1.7 1 0 0 1 1 1 1 XPG I-region AP2 PF00847.20 CCF72584.1 - 1.9e-09 37.6 0.3 1.5e-08 34.7 0.1 2.4 2 0 0 2 2 2 1 AP2 domain V-ATPase_H_C PF11698.8 CCF72585.1 - 1.7e-38 131.3 0.9 1.7e-38 131.3 0.9 2.7 2 1 0 3 3 3 1 V-ATPase subunit H V-ATPase_H_N PF03224.14 CCF72585.1 - 9.6e-30 103.9 6.2 3.1e-24 85.8 0.2 2.9 2 1 1 3 3 3 2 V-ATPase subunit H Arm PF00514.23 CCF72585.1 - 0.1 12.7 1.4 14 5.9 0.0 4.0 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat Cnd1 PF12717.7 CCF72585.1 - 0.86 9.6 8.1 1.9 8.5 0.8 3.6 2 2 1 3 3 3 0 non-SMC mitotic condensation complex subunit 1 RED_N PF07808.13 CCF72586.1 - 2.1e-07 30.8 2.9 0.00054 19.6 0.0 2.4 1 1 1 2 2 2 2 RED-like protein N-terminal region DUF3545 PF12065.8 CCF72586.1 - 1.7 8.7 12.7 0.43 10.6 2.6 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3545) RRM_1 PF00076.22 CCF72587.1 - 3.9e-21 74.7 0.0 1.6e-11 43.9 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF72587.1 - 5.5e-09 35.8 0.0 0.0025 17.6 0.0 2.5 2 0 0 2 2 2 2 Occluded RNA-recognition motif DUF4523 PF15023.6 CCF72587.1 - 2.3e-05 24.3 0.0 0.0014 18.4 0.0 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF4523) Limkain-b1 PF11608.8 CCF72587.1 - 0.00017 21.6 0.0 0.11 12.6 0.0 2.7 2 1 0 2 2 2 2 Limkain b1 KH_6 PF15985.5 CCF72588.1 - 1.7e-05 25.1 0.0 3.4e-05 24.1 0.0 1.5 1 0 0 1 1 1 1 KH domain U3_assoc_6 PF08640.11 CCF72589.1 - 3.5e-16 59.0 3.3 6.4e-16 58.2 1.8 2.2 2 0 0 2 2 2 1 U3 small nucleolar RNA-associated protein 6 NRDE-2 PF08424.10 CCF72589.1 - 0.024 13.8 0.1 0.055 12.6 0.1 1.5 1 0 0 1 1 1 0 NRDE-2, necessary for RNA interference RNA_pol_A_bac PF01000.26 CCF72591.1 - 1.1e-06 29.0 0.0 2.3e-06 28.0 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 CCF72591.1 - 0.0081 15.6 0.0 0.025 14.0 0.0 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain MRG PF05712.13 CCF72592.1 - 0.02 14.2 2.2 0.068 12.5 2.2 1.9 1 1 0 1 1 1 0 MRG ALMT PF11744.8 CCF72594.1 - 0.075 11.9 0.1 0.09 11.6 0.1 1.1 1 0 0 1 1 1 0 Aluminium activated malate transporter RTX PF02382.15 CCF72594.1 - 0.092 12.4 0.0 0.099 12.3 0.0 1.2 1 0 0 1 1 1 0 N-terminal domain in RTX protein zf-B_box PF00643.24 CCF72595.1 - 7.3e-06 26.0 7.1 1.2e-05 25.4 7.1 1.4 1 0 0 1 1 1 1 B-box zinc finger OmpH PF03938.14 CCF72595.1 - 0.069 13.5 3.9 0.089 13.1 0.7 2.0 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) DUF745 PF05335.13 CCF72595.1 - 0.79 9.4 4.4 5.9 6.6 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF745) FHA PF00498.26 CCF72596.1 - 7.3e-18 64.7 0.0 1.5e-17 63.7 0.0 1.6 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 CCF72596.1 - 8.1e-08 32.5 0.0 1.6e-07 31.6 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain MTBP_mid PF14919.6 CCF72596.1 - 0.084 12.1 0.0 0.13 11.4 0.0 1.3 1 0 0 1 1 1 0 MDM2-binding RAP1 PF07218.11 CCF72596.1 - 1.6 6.9 4.8 1.8 6.8 4.8 1.1 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) LSM14 PF12701.7 CCF72597.1 - 4.4e-28 97.2 0.1 1.9e-27 95.2 0.0 2.1 2 1 1 3 3 3 1 Scd6-like Sm domain SM-ATX PF14438.6 CCF72597.1 - 2.4e-06 27.6 0.0 6.8e-06 26.1 0.0 1.8 2 0 0 2 2 2 1 Ataxin 2 SM domain DUF3139 PF11337.8 CCF72597.1 - 0.28 11.8 2.1 2.6 8.8 2.1 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3139) NUC153 PF08159.12 CCF72598.1 - 0.00071 19.3 1.1 0.00071 19.3 1.1 2.2 3 0 0 3 3 3 1 NUC153 domain Cytochrom_D1 PF02239.16 CCF72598.1 - 0.013 14.1 0.0 0.03 12.9 0.0 1.6 1 0 0 1 1 1 0 Cytochrome D1 heme domain ANAPC4_WD40 PF12894.7 CCF72598.1 - 0.018 15.3 0.2 0.21 11.9 0.0 2.6 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain AROS PF15684.5 CCF72598.1 - 0.03 14.9 3.0 0.063 13.9 3.0 1.4 1 0 0 1 1 1 0 Active regulator of SIRT1, or 40S ribosomal protein S19-binding 1 RabGAP-TBC PF00566.18 CCF72599.1 - 6e-29 101.2 8.6 7.7e-29 100.9 8.6 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain CBP_BcsR PF10945.8 CCF72599.1 - 0.13 11.7 0.6 0.46 10.0 0.6 1.9 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsR zf-RING_2 PF13639.6 CCF72599.1 - 0.32 11.4 3.7 14 6.1 0.0 3.6 3 0 0 3 3 3 0 Ring finger domain zf-RING_11 PF17123.5 CCF72599.1 - 0.71 9.7 0.0 0.71 9.7 0.0 2.6 2 0 0 2 2 2 0 RING-like zinc finger NIF PF03031.18 CCF72600.1 - 2.9e-21 75.9 0.0 6.2e-21 74.8 0.0 1.5 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase LIG3_BRCT PF16759.5 CCF72600.1 - 0.0025 18.1 0.2 0.0059 16.9 0.2 1.6 1 0 0 1 1 1 1 DNA ligase 3 BRCT domain Las1 PF04031.13 CCF72601.1 - 3.8e-28 98.5 0.1 4.4e-28 98.3 0.1 1.0 1 0 0 1 1 1 1 Las1-like NUMOD1 PF07453.13 CCF72601.1 - 0.079 13.2 0.0 7.8 6.9 0.0 2.5 2 0 0 2 2 2 0 NUMOD1 domain E3_UbLigase_EDD PF11547.8 CCF72601.1 - 0.21 11.3 0.6 1.1 9.0 0.0 2.4 2 1 1 3 3 3 0 E3 ubiquitin ligase EDD BLYB PF05289.11 CCF72602.1 - 0.028 14.7 0.5 0.061 13.5 0.3 1.7 1 1 1 2 2 2 0 Borrelia hemolysin accessory protein FxsA PF04186.13 CCF72603.1 - 0.048 13.8 0.0 0.22 11.7 0.0 2.1 1 0 0 1 1 1 0 FxsA cytoplasmic membrane protein E1-E2_ATPase PF00122.20 CCF72603.1 - 0.057 12.9 0.4 0.21 11.1 0.0 2.1 2 0 0 2 2 2 0 E1-E2 ATPase Metallophos PF00149.28 CCF72604.1 - 3e-30 106.3 0.0 5.6e-30 105.4 0.0 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PPP5 PF08321.12 CCF72604.1 - 2.7e-11 43.6 0.1 1.2e-09 38.3 0.0 2.5 2 0 0 2 2 2 1 PPP5 TPR repeat region TPR_1 PF00515.28 CCF72604.1 - 6.4e-09 35.3 1.9 0.0018 18.0 0.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 CCF72604.1 - 4.3e-07 29.5 1.2 0.0059 16.6 0.0 3.5 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 CCF72604.1 - 0.029 14.1 2.1 0.71 9.6 0.1 2.7 2 1 1 3 3 3 0 TPR repeat TPR_8 PF13181.6 CCF72604.1 - 0.033 14.4 0.6 1.7 9.0 0.0 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat MIT PF04212.18 CCF72604.1 - 0.079 13.0 0.0 0.26 11.4 0.0 1.8 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain NIF PF03031.18 CCF72605.1 - 8.6e-20 71.1 0.2 2.5e-19 69.6 0.1 1.8 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase PTCB-BRCT PF12738.7 CCF72605.1 - 0.018 15.0 0.1 0.04 13.9 0.1 1.6 1 0 0 1 1 1 0 twin BRCT domain BRCT PF00533.26 CCF72605.1 - 0.03 14.7 0.1 0.089 13.2 0.1 1.9 1 0 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain HcyBio PF01837.16 CCF72605.1 - 0.055 12.3 0.0 0.091 11.6 0.0 1.3 1 0 0 1 1 1 0 Homocysteine biosynthesis enzyme, sulfur-incorporation SF3b10 PF07189.11 CCF72606.1 - 4e-30 103.7 0.1 4.6e-30 103.5 0.1 1.0 1 0 0 1 1 1 1 Splicing factor 3B subunit 10 (SF3b10) Oxidoreduct_C PF16490.5 CCF72606.1 - 0.1 12.3 0.1 0.12 12.1 0.1 1.0 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain Med14 PF08638.11 CCF72608.1 - 1.1e-16 60.9 0.0 1.3e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 Mediator complex subunit MED14 S4 PF01479.25 CCF72610.1 - 0.00012 21.7 0.0 0.00026 20.7 0.0 1.5 1 0 0 1 1 1 1 S4 domain PseudoU_synth_2 PF00849.22 CCF72610.1 - 0.0014 18.8 0.0 0.0029 17.7 0.0 1.5 1 1 0 1 1 1 1 RNA pseudouridylate synthase S4_2 PF13275.6 CCF72610.1 - 0.022 14.6 0.0 0.047 13.5 0.0 1.4 1 0 0 1 1 1 0 S4 domain Ion_trans PF00520.31 CCF72611.1 - 2e-14 53.4 33.2 2.9e-14 52.9 33.2 1.2 1 0 0 1 1 1 1 Ion transport protein OppC_N PF12911.7 CCF72611.1 - 0.014 15.4 0.2 11 6.1 0.0 3.2 2 0 0 2 2 2 0 N-terminal TM domain of oligopeptide transport permease C DnaJ PF00226.31 CCF72612.1 - 2e-20 72.7 1.4 3.8e-20 71.8 1.4 1.5 1 0 0 1 1 1 1 DnaJ domain RB_B PF01857.20 CCF72612.1 - 0.02 15.0 0.9 0.033 14.2 0.9 1.4 1 1 0 1 1 1 0 Retinoblastoma-associated protein B domain MitMem_reg PF13012.6 CCF72613.1 - 4.4e-28 97.9 0.3 7.1e-28 97.3 0.3 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 CCF72613.1 - 1.4e-27 96.0 0.0 2.2e-27 95.4 0.0 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease DUF2423 PF10338.9 CCF72614.1 - 4.3e-05 23.7 2.1 4.3e-05 23.7 2.1 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2423) Ribosomal_L36e PF01158.18 CCF72615.1 - 3.5e-36 123.3 4.1 4e-36 123.2 4.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L36e CLTH PF10607.9 CCF72615.1 - 0.041 13.8 0.1 0.067 13.1 0.1 1.4 1 1 1 2 2 2 0 CTLH/CRA C-terminal to LisH motif domain Pput2613-deam PF14427.6 CCF72615.1 - 0.052 13.4 0.0 0.081 12.8 0.0 1.3 1 0 0 1 1 1 0 Pput_2613-like deaminase Bystin PF05291.11 CCF72616.1 - 5.1e-84 282.0 6.9 2.5e-65 220.7 1.7 2.0 1 1 0 2 2 2 2 Bystin MIF4G PF02854.19 CCF72619.1 - 7.3e-30 104.2 3.8 1.7e-29 103.0 3.8 1.7 1 0 0 1 1 1 1 MIF4G domain PAM2 PF07145.15 CCF72619.1 - 2.5e-07 29.9 2.2 0.0021 17.6 0.5 2.7 2 0 0 2 2 2 2 Ataxin-2 C-terminal region MA3 PF02847.17 CCF72619.1 - 0.011 15.7 0.1 0.035 14.1 0.1 1.9 1 0 0 1 1 1 0 MA3 domain RF-1 PF00472.20 CCF72620.1 - 9e-32 109.4 1.9 1.3e-31 108.9 1.9 1.2 1 0 0 1 1 1 1 RF-1 domain PCRF PF03462.18 CCF72620.1 - 1.3e-24 87.1 1.3 9.7e-24 84.3 0.1 2.6 2 1 0 2 2 2 1 PCRF domain Acid_PPase PF12689.7 CCF72621.1 - 9.8e-06 25.5 0.1 0.00027 20.8 0.0 2.1 2 0 0 2 2 2 1 Acid Phosphatase Put_Phosphatase PF06888.12 CCF72621.1 - 0.018 14.5 0.1 0.029 13.8 0.1 1.3 1 0 0 1 1 1 0 Putative Phosphatase HAD_2 PF13419.6 CCF72621.1 - 0.02 15.0 3.1 11 6.1 0.0 3.0 2 1 0 3 3 3 0 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CCF72621.1 - 0.041 14.2 0.3 3.7 7.8 0.1 2.6 1 1 1 2 2 2 0 haloacid dehalogenase-like hydrolase PNK3P PF08645.11 CCF72621.1 - 0.083 12.6 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Polynucleotide kinase 3 phosphatase Bromo_TP_like PF17027.5 CCF72623.1 - 0.12 12.5 1.9 0.39 10.9 0.3 2.2 2 1 0 2 2 2 0 Histone-fold protein Ribonuclease_3 PF00636.26 CCF72623.1 - 3.1 8.5 5.2 63 4.3 5.2 2.5 1 1 0 1 1 1 0 Ribonuclease III domain CRAL_TRIO PF00650.20 CCF72624.1 - 1.2e-21 77.1 0.0 1.9e-21 76.4 0.0 1.4 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 CCF72624.1 - 0.00023 21.3 0.0 0.00049 20.3 0.0 1.5 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain Yip1 PF04893.17 CCF72625.1 - 0.0018 18.0 15.2 0.0033 17.1 15.2 1.4 1 0 0 1 1 1 1 Yip1 domain CK_II_beta PF01214.18 CCF72626.1 - 4.4e-61 205.9 0.0 5.1e-61 205.7 0.0 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit zf-FPG_IleRS PF06827.14 CCF72626.1 - 0.089 12.7 0.4 0.089 12.7 0.4 1.8 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS Helicase_C PF00271.31 CCF72627.1 - 1.2e-20 73.9 0.1 2.8e-17 63.1 0.0 2.9 2 0 0 2 2 2 2 Helicase conserved C-terminal domain DEAD PF00270.29 CCF72627.1 - 4.3e-18 65.7 0.0 8.7e-18 64.7 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 CCF72627.1 - 2.4e-11 44.2 1.0 2.4e-11 44.2 1.0 2.4 2 0 0 2 2 2 1 RecQ zinc-binding ResIII PF04851.15 CCF72627.1 - 1.7e-05 24.9 0.0 3.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DKCLD PF08068.12 CCF72628.1 - 4e-27 94.0 0.3 1.7e-26 92.0 0.2 2.1 2 0 0 2 2 2 1 DKCLD (NUC011) domain TruB_N PF01509.18 CCF72628.1 - 2.9e-22 79.6 0.2 1.7e-19 70.6 0.2 3.1 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 CCF72628.1 - 6e-20 71.1 0.1 1e-19 70.4 0.1 1.4 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 CCF72628.1 - 4.6e-16 58.5 0.3 4.6e-16 58.5 0.3 2.0 3 0 0 3 3 3 1 PUA domain UPF0113 PF03657.13 CCF72628.1 - 0.044 14.0 0.0 0.11 12.8 0.0 1.7 1 0 0 1 1 1 0 UPF0113 PUA domain PseudoU_synth_2 PF00849.22 CCF72628.1 - 0.079 13.0 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 RNA pseudouridylate synthase Not1 PF04054.15 CCF72629.1 - 3.9e-47 160.9 0.0 7.3e-47 160.0 0.0 1.4 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 CNOT1_CAF1_bind PF16415.5 CCF72629.1 - 1.6e-40 138.9 0.6 3.5e-40 137.8 0.6 1.5 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 CAF1-binding domain DUF3819 PF12842.7 CCF72629.1 - 4.8e-11 42.8 0.6 9.2e-07 28.9 0.0 2.6 1 1 1 2 2 2 2 Domain of unknown function (DUF3819) Peptidase_C54 PF03416.19 CCF72630.1 - 2.9e-15 56.4 0.0 4.2e-14 52.6 0.0 2.1 1 1 0 1 1 1 1 Peptidase family C54 Peptidase_C78 PF07910.13 CCF72630.1 - 0.023 14.2 0.0 0.042 13.3 0.0 1.5 1 0 0 1 1 1 0 Peptidase family C78 HSA PF07529.13 CCF72631.1 - 3.5e-05 24.1 3.7 4.1e-05 23.8 1.8 2.0 1 1 1 2 2 2 1 HSA FokI_C PF02980.16 CCF72631.1 - 0.056 13.5 0.3 0.095 12.7 0.3 1.3 1 0 0 1 1 1 0 Restriction endonuclease FokI, catalytic domain LptD PF04453.14 CCF72631.1 - 0.11 11.6 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 LPS transport system D DUF3294 PF07957.11 CCF72633.1 - 0.016 15.0 0.1 0.022 14.5 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3294) cNMP_binding PF00027.29 CCF72634.1 - 0.032 14.3 0.0 2.2 8.4 0.0 2.5 2 1 0 2 2 2 0 Cyclic nucleotide-binding domain cNMP_binding PF00027.29 CCF72635.1 - 1.7e-10 40.8 0.0 3.1e-10 40.0 0.0 1.4 1 0 0 1 1 1 1 Cyclic nucleotide-binding domain PHO4 PF01384.20 CCF72636.1 - 6.3e-81 272.0 12.1 9.2e-81 271.5 12.1 1.2 1 0 0 1 1 1 1 Phosphate transporter family DUF2207 PF09972.9 CCF72636.1 - 8 5.1 14.4 16 4.1 0.1 2.7 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) CAF1A PF12253.8 CCF72637.1 - 0.0012 19.0 6.5 0.0012 19.0 6.5 2.2 3 0 0 3 3 3 1 Chromatin assembly factor 1 subunit A Exonuc_VII_L PF02601.15 CCF72637.1 - 1.1 8.8 5.4 1.7 8.1 5.4 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Borrelia_P83 PF05262.11 CCF72637.1 - 8.3 4.8 16.2 12 4.3 16.2 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein TRM PF02005.16 CCF72638.1 - 2.9e-86 290.0 0.5 8.8e-70 235.8 0.1 2.2 2 0 0 2 2 2 2 N2,N2-dimethylguanosine tRNA methyltransferase DUF2067 PF09840.9 CCF72638.1 - 0.17 11.4 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2067) E1-E2_ATPase PF00122.20 CCF72639.1 - 3.2e-53 179.9 0.2 1.2e-52 178.1 0.2 2.0 1 0 0 1 1 1 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 CCF72639.1 - 1.3e-45 155.3 3.6 1.3e-45 155.3 3.6 1.8 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 CCF72639.1 - 6.9e-24 85.3 0.2 7.3e-23 81.9 0.1 2.5 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 CCF72639.1 - 5.2e-19 68.1 0.0 1.1e-18 67.1 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 CCF72639.1 - 2e-15 56.2 0.0 6.9e-15 54.5 0.0 2.0 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Hydrolase_3 PF08282.12 CCF72639.1 - 6.1e-06 26.2 0.5 0.0013 18.5 0.2 2.5 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase HAD PF12710.7 CCF72639.1 - 0.00048 20.6 0.0 0.0013 19.2 0.0 1.8 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CCF72639.1 - 0.046 13.8 0.0 0.22 11.7 0.0 2.1 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase HA2 PF04408.23 CCF72640.1 - 5.2e-26 91.0 0.0 1.7e-25 89.4 0.0 1.9 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 CCF72640.1 - 1.9e-23 82.6 0.0 4e-23 81.6 0.0 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 CCF72640.1 - 2.8e-08 34.1 0.2 5.8e-07 29.8 0.0 3.0 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF72640.1 - 2.1e-06 27.6 0.0 4.7e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 CCF72640.1 - 7.6e-06 26.2 0.1 2.7e-05 24.5 0.1 2.0 1 1 0 1 1 1 1 AAA domain S1 PF00575.23 CCF72640.1 - 6.6e-05 23.2 0.1 0.0002 21.6 0.1 1.8 1 0 0 1 1 1 1 S1 RNA binding domain AAA_19 PF13245.6 CCF72640.1 - 0.00014 22.2 0.1 0.00038 20.8 0.1 1.6 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 CCF72640.1 - 0.0036 17.8 1.2 0.63 10.6 0.1 3.5 2 1 0 3 3 3 1 ABC transporter AAA_30 PF13604.6 CCF72640.1 - 0.0038 17.0 0.0 0.0079 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain Flavi_DEAD PF07652.14 CCF72640.1 - 0.034 14.1 0.1 0.14 12.1 0.1 2.0 2 0 0 2 2 2 0 Flavivirus DEAD domain T2SSE PF00437.20 CCF72640.1 - 0.039 13.0 0.0 0.087 11.9 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein PhoH PF02562.16 CCF72640.1 - 0.056 12.9 0.0 0.22 11.0 0.0 2.0 1 0 0 1 1 1 0 PhoH-like protein ANAPC4_WD40 PF12894.7 CCF72641.1 - 1.3e-12 47.8 0.2 0.0015 18.8 0.0 5.6 2 2 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF72641.1 - 1.1e-11 45.1 2.8 0.021 15.7 0.1 7.0 7 0 0 7 7 7 2 WD domain, G-beta repeat PALB2_WD40 PF16756.5 CCF72641.1 - 0.01 14.8 0.2 0.019 13.9 0.1 1.6 2 0 0 2 2 2 0 Partner and localizer of BRCA2 WD40 domain Ge1_WD40 PF16529.5 CCF72641.1 - 0.023 13.7 0.2 1.1 8.2 0.0 2.5 2 0 0 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Frtz PF11768.8 CCF72641.1 - 0.038 12.3 0.0 0.81 7.9 0.0 2.6 3 0 0 3 3 3 0 WD repeat-containing and planar cell polarity effector protein Fritz Choline_kinase PF01633.20 CCF72644.1 - 2.4e-41 141.7 1.0 3.6e-41 141.1 1.0 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 CCF72644.1 - 7.5e-10 39.1 0.0 1e-09 38.7 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 CCF72644.1 - 1.6e-05 23.9 0.0 2.8e-05 23.1 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase EcKinase PF02958.20 CCF72644.1 - 0.0062 15.9 0.4 0.0062 15.9 0.4 1.7 2 1 0 2 2 2 1 Ecdysteroid kinase CsgG PF03783.14 CCF72644.1 - 0.069 12.4 0.1 0.11 11.7 0.1 1.2 1 0 0 1 1 1 0 Curli production assembly/transport component CsgG TFIIS_M PF07500.14 CCF72645.1 - 3.9e-23 82.1 2.6 8.4e-23 81.0 0.8 2.0 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS), central domain TFIIS_C PF01096.18 CCF72645.1 - 6.2e-17 61.2 6.9 1.2e-16 60.2 6.9 1.5 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS) Med26 PF08711.11 CCF72645.1 - 5.5e-06 26.3 0.3 1.3e-05 25.1 0.3 1.7 1 0 0 1 1 1 1 TFIIS helical bundle-like domain Elf1 PF05129.13 CCF72645.1 - 0.0032 17.5 1.0 0.0068 16.4 1.0 1.6 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like AP1AR PF15745.5 CCF72645.1 - 0.75 9.4 5.7 4.6 6.8 0.8 3.0 2 1 1 3 3 3 0 AP-1 complex-associated regulatory protein APC_u13 PF16634.5 CCF72646.1 - 0.17 11.8 2.0 0.65 9.9 0.4 2.1 2 0 0 2 2 2 0 Unstructured region on APC between APC_crr and SAMP EMG1 PF03587.14 CCF72647.1 - 7.3e-33 113.9 0.0 8.9e-33 113.6 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase ENTH PF01417.20 CCF72649.1 - 7.1e-17 61.6 0.0 1.3e-16 60.8 0.0 1.4 1 0 0 1 1 1 1 ENTH domain Macoilin PF09726.9 CCF72649.1 - 0.67 8.4 13.9 0.87 8.1 13.9 1.2 1 0 0 1 1 1 0 Macoilin family GREB1 PF15782.5 CCF72650.1 - 0.45 7.6 1.6 0.44 7.6 1.6 1.0 1 0 0 1 1 1 0 Gene regulated by oestrogen in breast cancer SDP_N PF12278.8 CCF72650.1 - 6.2 7.0 8.7 0.31 11.2 2.7 1.8 2 0 0 2 2 2 0 Sex determination protein N terminal RalF_SCD PF18248.1 CCF72651.1 - 0.003 17.6 0.2 0.11 12.4 0.1 2.5 2 0 0 2 2 2 1 RalF C-terminal Sec-7 capping domain DUF948 PF06103.11 CCF72651.1 - 0.047 14.0 0.8 11 6.4 0.1 4.1 2 2 2 4 4 4 0 Bacterial protein of unknown function (DUF948) zf-C4H2 PF10146.9 CCF72651.1 - 5 7.4 13.2 0.1 12.9 0.2 3.1 3 0 0 3 3 3 0 Zinc finger-containing protein Ribosomal_L3 PF00297.22 CCF72652.1 - 3.2e-161 536.4 4.6 6.1e-84 282.1 0.9 2.0 1 1 1 2 2 2 2 Ribosomal protein L3 DUF4296 PF14129.6 CCF72654.1 - 0.0044 17.6 0.1 0.013 16.1 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4296) DUF3834 PF12916.7 CCF72654.1 - 0.029 13.6 0.1 0.05 12.8 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3834) DHHC PF01529.20 CCF72655.1 - 1.2e-27 96.6 10.8 1.2e-27 96.6 10.8 2.1 2 0 0 2 2 2 2 DHHC palmitoyltransferase Methyltransf_11 PF08241.12 CCF72656.1 - 1.8e-20 73.3 0.0 3.2e-20 72.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF72656.1 - 6.1e-16 58.9 0.0 1.8e-15 57.4 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF72656.1 - 5.6e-12 45.7 0.0 7.4e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF72656.1 - 1.6e-09 37.8 0.1 2e-09 37.5 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CCF72656.1 - 2e-07 30.6 0.0 3.6e-07 29.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 CCF72656.1 - 6.7e-07 30.0 0.0 1.5e-06 28.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_9 PF08003.11 CCF72656.1 - 3.6e-06 26.1 0.0 7.2e-06 25.1 0.0 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) CMAS PF02353.20 CCF72656.1 - 0.0012 18.2 0.0 0.0028 17.0 0.0 1.6 1 1 1 2 2 2 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 CCF72656.1 - 0.059 13.0 0.3 0.29 10.7 0.3 2.0 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW MTS PF05175.14 CCF72656.1 - 0.066 12.8 0.1 0.21 11.1 0.1 1.8 1 1 0 1 1 1 0 Methyltransferase small domain PCMT PF01135.19 CCF72656.1 - 0.099 12.4 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Ebp2 PF05890.12 CCF72657.1 - 7.8e-27 94.5 19.2 8.5e-27 94.4 19.2 1.0 1 0 0 1 1 1 1 Eukaryotic rRNA processing protein EBP2 Brix PF04427.18 CCF72658.1 - 7.2e-20 71.9 0.0 9.6e-20 71.5 0.0 1.2 1 0 0 1 1 1 1 Brix domain CotJA PF11007.8 CCF72658.1 - 0.016 15.0 0.0 0.044 13.6 0.0 1.8 1 0 0 1 1 1 0 Spore coat associated protein JA (CotJA) DUF4783 PF16022.5 CCF72658.1 - 0.024 14.8 0.3 0.058 13.6 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4783) AAA_17 PF13207.6 CCF72660.1 - 2.5e-05 24.7 13.3 19 5.7 0.1 6.7 1 1 5 6 6 6 0 AAA domain T3SS_basalb_I PF17001.5 CCF72660.1 - 0.099 13.2 2.3 1.9 9.1 0.3 3.6 3 0 0 3 3 3 0 Type III secretion basal body protein I, YscI, HrpB, PscI CorA PF01544.18 CCF72660.1 - 0.14 11.5 15.8 0.065 12.5 2.2 2.6 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein MtrB PF05440.12 CCF72660.1 - 0.21 12.0 0.6 3.1 8.3 0.1 3.3 1 1 2 3 3 3 0 Tetrahydromethanopterin S-methyltransferase subunit B MscS_porin PF12795.7 CCF72660.1 - 0.55 9.7 7.7 0.31 10.5 1.4 2.4 1 1 1 2 2 2 0 Mechanosensitive ion channel porin domain Occludin_ELL PF07303.13 CCF72660.1 - 0.75 10.6 17.0 3.6 8.4 4.0 3.5 2 1 1 3 3 3 0 Occludin homology domain DUF948 PF06103.11 CCF72660.1 - 1.1 9.5 29.5 0.36 11.1 0.1 5.1 4 1 1 5 5 4 0 Bacterial protein of unknown function (DUF948) Snapin_Pallidin PF14712.6 CCF72660.1 - 1.2 9.6 17.0 0.59 10.6 2.3 3.5 2 1 1 3 3 3 0 Snapin/Pallidin DHR10 PF18595.1 CCF72660.1 - 6.6 6.8 9.0 5.8 7.0 0.1 3.5 1 1 2 3 3 3 0 Designed helical repeat protein 10 domain IKBKB_SDD PF18397.1 CCF72660.1 - 6.6 5.9 13.3 3.1 7.0 1.2 2.3 1 1 0 2 2 2 0 IQBAL scaffold dimerization domain STAT_alpha PF01017.20 CCF72660.1 - 7.3 6.4 10.4 1.3e+02 2.4 10.1 2.7 1 1 0 1 1 1 0 STAT protein, all-alpha domain Sec20 PF03908.13 CCF72660.1 - 7.7 6.5 10.2 0.47 10.4 2.2 3.3 2 1 2 4 4 4 0 Sec20 DNA_binding_1 PF01035.20 CCF72661.1 - 0.06 13.5 0.0 0.079 13.1 0.0 1.2 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, DNA binding domain AAA_assoc_2 PF16193.5 CCF72662.1 - 0.17 12.3 0.1 0.55 10.6 0.1 1.9 1 1 0 1 1 1 0 AAA C-terminal domain HSP70 PF00012.20 CCF72664.1 - 0.022 12.9 0.4 0.026 12.7 0.4 1.0 1 0 0 1 1 1 0 Hsp70 protein TSP_1 PF00090.19 CCF72664.1 - 0.026 14.7 0.7 0.026 14.7 0.7 2.2 2 0 0 2 2 2 0 Thrombospondin type 1 domain RRM_1 PF00076.22 CCF72665.1 - 3.1e-11 42.9 0.0 5.5e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CSTF2_hinge PF14327.6 CCF72665.1 - 0.0034 17.8 0.2 0.0079 16.6 0.2 1.5 1 0 0 1 1 1 1 Hinge domain of cleavage stimulation factor subunit 2 F-box_4 PF15966.5 CCF72666.1 - 0.027 14.4 0.2 0.09 12.7 0.2 1.9 1 0 0 1 1 1 0 F-box FAST_1 PF06743.15 CCF72666.1 - 6.9 6.7 11.8 4.3 7.4 0.1 4.6 5 0 0 5 5 5 0 FAST kinase-like protein, subdomain 1 RAP PF08373.10 CCF72667.1 - 9.7e-13 48.0 4.9 9.7e-12 44.8 4.9 2.5 1 1 0 1 1 1 1 RAP domain FAST_1 PF06743.15 CCF72667.1 - 0.08 12.9 0.4 14 5.7 0.0 3.2 2 1 1 3 3 3 0 FAST kinase-like protein, subdomain 1 MTES_1575 PF18741.1 CCF72667.1 - 0.098 12.8 1.1 0.36 11.0 1.1 2.1 1 1 0 1 1 1 0 REase_MTES_1575 Sad1_UNC PF07738.13 CCF72668.1 - 1.1e-18 67.6 0.1 3e-18 66.1 0.1 1.8 1 0 0 1 1 1 1 Sad1 / UNC-like C-terminal Sec63 PF02889.16 CCF72669.1 - 4.4e-67 225.9 7.2 7.7e-39 133.4 0.9 2.4 2 0 0 2 2 2 2 Sec63 Brl domain DEAD PF00270.29 CCF72669.1 - 2.3e-39 135.0 0.0 4.6e-22 78.6 0.0 2.7 2 0 0 2 2 2 2 DEAD/DEAH box helicase ResIII PF04851.15 CCF72669.1 - 3.5e-24 85.7 0.0 3.8e-11 43.3 0.0 2.5 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CCF72669.1 - 4.9e-10 39.7 0.1 3.6e-08 33.7 0.0 3.5 2 1 0 2 2 2 1 Helicase conserved C-terminal domain AAA PF00004.29 CCF72669.1 - 2e-05 25.0 0.9 0.01 16.3 0.0 4.4 4 2 0 4 4 4 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF72669.1 - 0.00015 22.1 0.4 1.6 9.0 0.0 3.8 3 2 0 3 3 3 2 AAA domain PhoH PF02562.16 CCF72669.1 - 0.00032 20.2 0.0 0.7 9.3 0.0 2.4 2 0 0 2 2 2 2 PhoH-like protein UvrD-helicase PF00580.21 CCF72669.1 - 0.0022 17.5 0.1 2 7.9 0.0 2.9 2 0 0 2 2 2 2 UvrD/REP helicase N-terminal domain IstB_IS21 PF01695.17 CCF72669.1 - 0.0031 17.3 0.0 0.86 9.3 0.0 3.4 4 0 0 4 4 4 1 IstB-like ATP binding protein T2SSE PF00437.20 CCF72669.1 - 0.0042 16.2 0.0 2.6 7.0 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_23 PF13476.6 CCF72669.1 - 1.8 9.0 6.2 14 6.2 0.0 4.2 5 0 0 5 5 5 0 AAA domain Polyketide_cyc PF03364.20 CCF72670.1 - 2.5e-16 60.1 0.0 3.1e-16 59.8 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DUF2119 PF09892.9 CCF72670.1 - 4.3 6.7 6.0 2.6 7.4 0.7 2.4 2 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2119) Ion_trans_2 PF07885.16 CCF72671.1 - 7.8e-12 45.0 3.2 3.9e-11 42.7 3.2 2.3 1 0 0 1 1 1 1 Ion channel BK_channel_a PF03493.18 CCF72671.1 - 1.6e-09 37.9 0.4 4.4e-08 33.2 0.0 2.9 2 1 0 2 2 2 1 Calcium-activated BK potassium channel alpha subunit DEAD PF00270.29 CCF72672.1 - 3e-50 170.4 0.0 6.1e-47 159.6 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72672.1 - 8.5e-34 116.2 0.7 3.8e-32 110.9 0.3 2.8 2 1 1 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72672.1 - 3.1e-09 37.1 0.0 4.1e-06 26.9 0.0 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CCF72672.1 - 5e-07 29.2 0.1 8.4e-07 28.5 0.1 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase HtrL_YibB PF09612.10 CCF72672.1 - 0.014 14.9 0.1 0.041 13.4 0.1 1.7 1 0 0 1 1 1 0 Bacterial protein of unknown function (HtrL_YibB) DUF2095 PF09868.9 CCF72672.1 - 0.072 13.1 0.0 0.24 11.4 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2095) Pkinase PF00069.25 CCF72673.1 - 2.7e-08 33.5 0.0 1e-07 31.6 0.0 2.1 2 1 0 2 2 2 1 Protein kinase domain APH PF01636.23 CCF72673.1 - 0.021 14.7 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF1463 PF07316.11 CCF72673.1 - 0.096 12.5 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1463) Rcd1 PF04078.13 CCF72674.1 - 3.4e-112 373.9 0.2 4.1e-112 373.7 0.2 1.1 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like Init_tRNA_PT PF04179.12 CCF72674.1 - 0.11 12.8 0.0 0.29 11.4 0.0 1.7 1 0 0 1 1 1 0 Rit1 DUSP-like domain Tubulin PF00091.25 CCF72675.1 - 4e-70 236.0 0.0 1.1e-69 234.6 0.0 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 CCF72675.1 - 2.6e-41 140.7 0.3 4e-41 140.1 0.3 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 CCF72675.1 - 3.8e-05 24.0 0.0 8.7e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 CCF72675.1 - 0.0033 17.1 0.0 0.0072 16.0 0.0 1.5 1 0 0 1 1 1 1 Tubulin domain Tubulin_2 PF13809.6 CCF72675.1 - 0.0046 16.2 0.0 0.009 15.2 0.0 1.4 1 0 0 1 1 1 1 Tubulin like FHA PF00498.26 CCF72676.1 - 1.4e-08 35.0 0.1 6.4e-08 32.8 0.0 2.1 2 0 0 2 2 2 1 FHA domain Yop-YscD_cpl PF16697.5 CCF72676.1 - 0.0062 16.8 0.0 0.035 14.4 0.0 2.3 2 1 1 3 3 3 1 Inner membrane component of T3SS, cytoplasmic domain GTP1_OBG PF01018.22 CCF72677.1 - 4.3e-21 75.1 0.1 6.8e-21 74.5 0.1 1.3 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 CCF72677.1 - 5e-10 39.5 0.0 7.7e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF72677.1 - 2.1e-07 30.6 0.0 3.4e-07 29.9 0.0 1.3 1 1 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF72677.1 - 1.8e-06 28.1 0.4 0.016 15.3 0.0 2.2 1 1 1 2 2 2 2 Dynamin family Gtr1_RagA PF04670.12 CCF72677.1 - 3.3e-06 26.7 0.0 4.4e-06 26.2 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Roc PF08477.13 CCF72677.1 - 0.016 15.5 0.0 0.057 13.6 0.0 1.9 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF72677.1 - 0.034 13.6 0.0 0.054 12.9 0.0 1.4 1 1 0 1 1 1 0 ADP-ribosylation factor family mCpol PF18182.1 CCF72677.1 - 0.088 13.2 0.0 0.19 12.1 0.0 1.5 2 0 0 2 2 2 0 minimal CRISPR polymerase domain SRPRB PF09439.10 CCF72677.1 - 0.12 11.8 0.0 0.18 11.3 0.0 1.3 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit TACC_C PF05010.14 CCF72679.1 - 0.0038 17.0 8.9 0.006 16.4 8.9 1.2 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal KxDL PF10241.9 CCF72679.1 - 1.6 9.0 8.3 11 6.4 2.2 2.5 2 0 0 2 2 2 0 Uncharacterized conserved protein MCM PF00493.23 CCF72680.1 - 1.1e-84 283.0 0.2 2.1e-84 282.1 0.2 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 CCF72680.1 - 4.1e-20 72.0 0.4 1.2e-19 70.6 0.4 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_OB PF17207.3 CCF72680.1 - 6.4e-18 64.8 0.0 1.2e-17 63.9 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_N PF14551.6 CCF72680.1 - 7.6e-06 26.5 0.1 1.6e-05 25.4 0.1 1.5 1 0 0 1 1 1 1 MCM N-terminal domain AAA_5 PF07728.14 CCF72680.1 - 2.8e-05 24.1 0.0 7.6e-05 22.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CCF72680.1 - 0.00051 19.5 0.1 0.15 11.4 0.1 2.6 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_lid_2 PF17863.1 CCF72680.1 - 0.0031 17.3 0.4 0.0066 16.3 0.4 1.5 1 0 0 1 1 1 1 AAA lid domain AAA_3 PF07726.11 CCF72680.1 - 0.0058 16.5 0.0 0.021 14.7 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Ephrin_rec_like PF07699.13 CCF72680.1 - 0.048 13.4 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 Putative ephrin-receptor like AAA_16 PF13191.6 CCF72680.1 - 0.05 14.0 0.3 0.6 10.5 0.1 2.6 2 1 1 3 3 3 0 AAA ATPase domain Zn-ribbon_8 PF09723.10 CCF72680.1 - 0.24 11.5 1.1 0.55 10.4 1.1 1.6 1 0 0 1 1 1 0 Zinc ribbon domain PhageMin_Tail PF10145.9 CCF72681.1 - 0.047 13.5 0.0 0.062 13.1 0.0 1.1 1 0 0 1 1 1 0 Phage-related minor tail protein Cauli_DNA-bind PF03310.13 CCF72682.1 - 0.07 13.2 1.6 0.4 10.7 0.1 2.1 2 0 0 2 2 2 0 Caulimovirus DNA-binding protein FH2 PF02181.23 CCF72683.1 - 7.4e-44 150.4 2.2 7.4e-44 150.4 2.2 2.7 3 0 0 3 3 3 1 Formin Homology 2 Domain FapA PF03961.13 CCF72683.1 - 0.44 9.1 10.8 0.84 8.2 10.8 1.4 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF848 PF05852.11 CCF72683.1 - 0.76 9.9 11.2 2 8.5 11.2 1.7 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) Med21 PF11221.8 CCF72683.1 - 0.95 9.7 13.2 0.11 12.7 7.5 2.4 2 0 0 2 2 2 0 Subunit 21 of Mediator complex APG6_N PF17675.1 CCF72683.1 - 5 7.7 26.1 14 6.2 26.1 1.8 1 0 0 1 1 1 0 Apg6 coiled-coil region V_ATPase_I PF01496.19 CCF72683.1 - 5.8 4.7 7.3 8.9 4.1 7.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family polyprenyl_synt PF00348.17 CCF72684.1 - 5e-46 156.8 0.1 7.8e-46 156.2 0.1 1.3 1 0 0 1 1 1 1 Polyprenyl synthetase RabGAP-TBC PF00566.18 CCF72685.1 - 8.7e-42 143.2 8.4 1.3e-41 142.7 8.4 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Telomere_reg-2 PF10193.9 CCF72686.1 - 0.00026 21.4 2.0 0.027 14.9 0.4 3.4 3 1 0 3 3 3 1 Telomere length regulation protein Autophagy_N PF03986.13 CCF72687.1 - 1.2e-10 41.4 0.0 1.8e-10 40.9 0.0 1.3 1 0 0 1 1 1 1 Autophagocytosis associated protein (Atg3), N-terminal domain Autophagy_act_C PF03987.15 CCF72687.1 - 2.6e-06 27.9 0.0 6.2e-06 26.7 0.0 1.7 1 0 0 1 1 1 1 Autophagocytosis associated protein, active-site domain ATP_bind_3 PF01171.20 CCF72688.1 - 3e-33 115.1 2.9 8.4e-21 74.5 0.1 3.3 3 0 0 3 3 3 2 PP-loop family Peptidase_S10 PF00450.22 CCF72688.1 - 0.003 17.0 1.6 0.015 14.7 0.7 2.1 2 0 0 2 2 2 1 Serine carboxypeptidase UPF0552 PF10574.9 CCF72688.1 - 0.061 12.7 0.1 0.13 11.6 0.1 1.5 1 0 0 1 1 1 0 Arp2/3-interacting proteins Arpin Myb_DNA-bind_4 PF13837.6 CCF72688.1 - 0.69 10.3 4.3 17 5.9 0.1 3.8 3 1 1 4 4 4 0 Myb/SANT-like DNA-binding domain TBP PF00352.21 CCF72689.1 - 1.7e-11 43.9 0.0 2.4e-05 24.2 0.0 2.5 2 1 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DEAD PF00270.29 CCF72690.1 - 5.8e-16 58.8 0.3 2.3e-15 56.8 0.2 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72690.1 - 4.7e-07 30.1 0.4 3.4e-06 27.4 0.0 2.5 3 0 0 3 3 3 1 Helicase conserved C-terminal domain Phage_Treg PF04761.12 CCF72690.1 - 0.79 9.9 2.6 2.2 8.5 0.2 2.8 3 0 0 3 3 3 0 Lactococcus bacteriophage putative transcription regulator C2-C2_1 PF11618.8 CCF72692.1 - 0.05 13.7 0.1 0.43 10.7 0.0 2.0 2 0 0 2 2 2 0 First C2 domain of RPGR-interacting protein 1 ATP_bind_1 PF03029.17 CCF72693.1 - 1.3e-60 205.2 0.1 1.2e-53 182.4 0.0 3.0 1 1 0 2 2 2 2 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 CCF72693.1 - 0.00027 21.5 0.1 0.0021 18.6 0.0 2.3 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CCF72693.1 - 0.0023 17.7 0.0 0.004 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CCF72693.1 - 0.0069 16.7 0.0 0.042 14.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain CLP1_P PF16575.5 CCF72693.1 - 0.01 15.7 0.0 0.022 14.5 0.0 1.8 1 1 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_33 PF13671.6 CCF72693.1 - 0.064 13.4 0.0 0.094 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 CCF72693.1 - 0.072 12.7 0.0 0.17 11.5 0.0 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DUF87 PF01935.17 CCF72693.1 - 0.078 13.1 0.0 0.15 12.1 0.0 1.5 1 0 0 1 1 1 0 Helicase HerA, central domain KTI12 PF08433.10 CCF72693.1 - 0.08 12.4 0.0 0.2 11.1 0.0 1.6 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_19 PF13245.6 CCF72693.1 - 0.1 13.0 0.0 0.2 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CCF72693.1 - 0.11 12.0 0.0 0.19 11.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region PduV-EutP PF10662.9 CCF72693.1 - 0.12 12.2 0.0 1.5 8.6 0.0 2.3 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation ABC1 PF03109.16 CCF72694.1 - 1.7e-26 92.7 0.0 4.2e-26 91.5 0.0 1.7 1 0 0 1 1 1 1 ABC1 family Ribosomal_L33 PF00471.20 CCF72695.1 - 6.7e-19 68.1 3.9 1.1e-18 67.4 3.9 1.4 1 0 0 1 1 1 1 Ribosomal protein L33 FERM_C PF09380.10 CCF72695.1 - 0.11 12.9 0.0 0.17 12.3 0.0 1.3 1 0 0 1 1 1 0 FERM C-terminal PH-like domain ACBP PF00887.19 CCF72696.1 - 9.9e-29 99.4 0.1 1.1e-28 99.3 0.1 1.0 1 0 0 1 1 1 1 Acyl CoA binding protein AP2 PF00847.20 CCF72697.1 - 2.3e-32 111.0 11.0 3.7e-14 52.7 5.2 3.4 3 0 0 3 3 3 3 AP2 domain DUF5530 PF17670.1 CCF72697.1 - 0.054 13.3 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5530) DUF3254 PF11630.8 CCF72697.1 - 0.12 12.6 3.9 0.24 11.6 0.0 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3254) Thioredoxin PF00085.20 CCF72698.1 - 2.9e-05 24.0 0.0 5.8e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin WD40 PF00400.32 CCF72699.1 - 6.2e-16 58.5 12.6 0.0023 18.7 0.0 7.1 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF72699.1 - 4.6e-12 46.1 0.4 0.031 14.6 0.0 5.2 4 2 2 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain DNA_pol_B PF00136.21 CCF72700.1 - 5.5e-101 338.5 0.8 1.2e-100 337.5 0.8 1.6 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 CCF72700.1 - 3.1e-19 69.3 5.1 7.9e-19 68.0 5.1 1.6 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DNA_pol_alpha_N PF12254.8 CCF72700.1 - 1.5e-06 28.2 3.5 4.1e-06 26.8 3.5 1.8 1 0 0 1 1 1 1 DNA polymerase alpha subunit p180 N terminal RNA_POL_M_15KD PF02150.16 CCF72700.1 - 0.14 12.1 1.5 0.39 10.6 1.5 1.8 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit C1_1 PF00130.22 CCF72700.1 - 0.31 11.0 4.6 0.082 12.8 1.0 1.9 2 0 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DNA_ligase_ZBD PF03119.16 CCF72700.1 - 0.52 10.4 2.4 1.5 8.9 2.4 1.9 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain DUF1451 PF07295.11 CCF72700.1 - 2.3 8.2 4.5 55 3.8 0.4 3.6 3 0 0 3 3 3 0 Zinc-ribbon containing domain RRM_1 PF00076.22 CCF72702.1 - 3.2e-14 52.5 0.0 4.4e-06 26.4 0.0 3.4 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF72702.1 - 0.075 12.9 1.0 1.8 8.5 0.0 2.9 3 0 0 3 3 3 0 Occluded RNA-recognition motif Ribosom_S12_S23 PF00164.25 CCF72703.1 - 1.3e-27 95.7 0.5 1.8e-27 95.2 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_S12 PF17487.2 CCF72703.1 - 0.021 15.5 0.0 0.047 14.4 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S12 EMP24_GP25L PF01105.24 CCF72704.1 - 9.1e-21 74.6 2.4 1.4e-20 74.0 2.4 1.3 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD SieB PF14163.6 CCF72704.1 - 0.044 13.3 2.0 0.12 11.9 0.7 2.1 2 0 0 2 2 2 0 Super-infection exclusion protein B FRP PF18032.1 CCF72704.1 - 0.15 12.7 0.1 0.25 12.0 0.1 1.4 1 0 0 1 1 1 0 Photoprotection regulator fluorescence recovery protein MCM PF00493.23 CCF72705.1 - 3.7e-86 287.8 0.0 6.1e-86 287.1 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 CCF72705.1 - 1e-22 80.3 0.1 2.4e-22 79.1 0.1 1.6 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 CCF72705.1 - 9.3e-15 54.8 3.8 4.6e-14 52.6 3.8 2.2 1 1 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 CCF72705.1 - 2e-06 27.4 0.1 0.0016 17.9 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CCF72705.1 - 0.00014 21.8 0.0 0.00042 20.3 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 CCF72705.1 - 0.005 16.7 0.0 0.01 15.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 CCF72705.1 - 0.0056 17.1 0.0 0.016 15.7 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF72705.1 - 0.11 12.9 0.2 1.4 9.3 0.0 2.7 2 1 0 3 3 3 0 AAA ATPase domain UQ_con PF00179.26 CCF72706.1 - 1.7e-47 160.6 0.0 1.9e-47 160.4 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 CCF72706.1 - 0.0021 17.9 0.0 0.0033 17.3 0.0 1.3 1 0 0 1 1 1 1 UEV domain Prok-E2_B PF14461.6 CCF72706.1 - 0.0028 17.3 0.0 0.0034 17.1 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 CCF72706.1 - 0.085 13.1 0.1 0.1 12.9 0.1 1.3 1 0 0 1 1 1 0 RWD domain DNA_topoisoIV PF00521.20 CCF72710.1 - 4e-125 418.1 0.1 5.9e-125 417.5 0.1 1.3 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A TOPRIM_C PF16898.5 CCF72710.1 - 4.9e-43 146.5 6.3 4.9e-43 146.5 6.3 2.7 3 0 0 3 3 3 1 C-terminal associated domain of TOPRIM DNA_gyraseB PF00204.25 CCF72710.1 - 1e-20 73.9 0.5 2.5e-20 72.6 0.5 1.6 1 0 0 1 1 1 1 DNA gyrase B HATPase_c PF02518.26 CCF72710.1 - 2.4e-11 44.1 0.1 1.7e-10 41.4 0.0 2.4 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 CCF72710.1 - 7.6e-07 29.3 0.0 3.9e-06 27.0 0.0 2.3 2 0 0 2 2 2 1 Toprim domain Pyr_excise PF03013.14 CCF72712.1 - 0.0061 16.5 0.8 0.0061 16.5 0.8 1.7 1 1 1 2 2 2 1 Pyrimidine dimer DNA glycosylase MipZ PF09140.11 CCF72712.1 - 0.07 12.4 1.3 0.076 12.3 1.3 1.2 1 0 0 1 1 1 0 ATPase MipZ DUF2481 PF10654.9 CCF72713.1 - 0.034 14.2 0.0 0.054 13.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) Collar PF07484.12 CCF72714.1 - 0.06 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Phage Tail Collar Domain BCNT PF07572.12 CCF72715.1 - 2e-07 30.9 2.7 2e-07 30.9 2.7 1.8 2 0 0 2 2 2 1 Bucentaur or craniofacial development COX17 PF05051.13 CCF72716.1 - 2e-14 53.7 5.4 3e-14 53.1 5.4 1.3 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) Leu_Phe_trans PF03588.14 CCF72718.1 - 0.085 12.4 0.0 4.1 6.9 0.0 2.2 2 0 0 2 2 2 0 Leucyl/phenylalanyl-tRNA protein transferase DIX PF00778.17 CCF72718.1 - 0.11 12.3 0.1 0.22 11.4 0.1 1.4 1 0 0 1 1 1 0 DIX domain IPK PF03770.16 CCF72719.1 - 0.074 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Inositol polyphosphate kinase Kre28 PF17097.5 CCF72720.1 - 0.00059 18.9 1.6 0.00073 18.6 1.6 1.1 1 0 0 1 1 1 1 Spindle pole body component Fib_alpha PF08702.10 CCF72720.1 - 0.0026 18.0 4.9 0.0059 16.8 1.9 2.2 1 1 0 2 2 2 1 Fibrinogen alpha/beta chain family DUF349 PF03993.12 CCF72720.1 - 0.0028 17.9 0.3 0.0055 17.0 0.3 1.5 1 0 0 1 1 1 1 Domain of Unknown Function (DUF349) Tektin PF03148.14 CCF72720.1 - 0.0047 15.7 0.4 0.0066 15.3 0.4 1.1 1 0 0 1 1 1 1 Tektin family DUF1664 PF07889.12 CCF72720.1 - 0.0089 16.1 1.2 0.014 15.4 0.8 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF1664) Baculo_PEP_C PF04513.12 CCF72720.1 - 0.011 15.8 0.0 0.019 15.0 0.0 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus Rota_NSP4 PF01452.16 CCF72720.1 - 0.077 12.7 1.9 0.15 11.7 1.8 1.5 1 1 0 1 1 1 0 Rotavirus non structural protein Terminase_2 PF03592.16 CCF72720.1 - 0.29 11.6 2.5 0.47 10.9 2.5 1.4 1 1 0 1 1 1 0 Terminase small subunit SecY PF00344.20 CCF72721.1 - 2.8e-69 233.7 15.8 3.5e-69 233.4 15.8 1.1 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 CCF72721.1 - 1.8e-17 62.9 2.4 2.3e-17 62.5 0.1 2.4 2 0 0 2 2 2 1 Plug domain of Sec61p Flagellar_put PF12611.8 CCF72721.1 - 0.12 12.2 0.3 0.32 10.8 0.3 1.7 1 0 0 1 1 1 0 Putative flagellar DUF4652 PF15525.6 CCF72722.1 - 0.011 15.5 0.5 0.085 12.6 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4652) Ribosomal_L3 PF00297.22 CCF72724.1 - 3.8e-13 49.2 1.6 2.1e-11 43.4 0.3 2.6 2 1 1 3 3 3 2 Ribosomal protein L3 MMR_HSR1 PF01926.23 CCF72725.1 - 5.8e-18 65.0 0.1 1.5e-17 63.7 0.1 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 CCF72725.1 - 1.1e-05 24.9 0.1 2.8e-05 23.6 0.1 1.6 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Dynamin_N PF00350.23 CCF72725.1 - 5e-05 23.4 2.0 0.2 11.7 0.1 2.8 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 CCF72725.1 - 0.00015 21.7 1.3 0.0033 17.3 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase FeoB_N PF02421.18 CCF72725.1 - 0.00038 20.0 0.0 0.00072 19.1 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Septin PF00735.18 CCF72725.1 - 0.0024 17.2 0.0 0.0054 16.1 0.0 1.5 1 0 0 1 1 1 1 Septin CLP1_P PF16575.5 CCF72725.1 - 0.0025 17.7 0.0 0.0055 16.5 0.0 1.6 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop IIGP PF05049.13 CCF72725.1 - 0.0039 16.3 0.0 0.0093 15.1 0.0 1.6 1 0 0 1 1 1 1 Interferon-inducible GTPase (IIGP) AIG1 PF04548.16 CCF72725.1 - 0.021 14.1 0.0 0.068 12.5 0.0 1.8 2 0 0 2 2 2 0 AIG1 family RNA_helicase PF00910.22 CCF72725.1 - 0.047 14.1 0.3 0.62 10.5 0.0 2.4 2 0 0 2 2 2 0 RNA helicase Roc PF08477.13 CCF72725.1 - 0.063 13.5 0.0 0.18 12.1 0.0 1.8 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 CCF72725.1 - 0.1 13.1 1.6 0.68 10.4 0.0 2.6 2 1 0 2 2 2 0 ABC transporter V_ATPase_I PF01496.19 CCF72726.1 - 4.5e-228 759.2 16.2 1.5e-227 757.4 16.2 1.7 1 1 0 1 1 1 1 V-type ATPase 116kDa subunit family P21-Arc PF04062.14 CCF72727.1 - 0.14 12.2 0.0 14 5.7 0.0 2.5 2 0 0 2 2 2 0 ARP2/3 complex ARPC3 (21 kDa) subunit YEATS PF03366.16 CCF72728.1 - 3.1e-25 87.9 0.0 6.3e-25 87.0 0.0 1.5 1 0 0 1 1 1 1 YEATS family GIT_CC PF16559.5 CCF72728.1 - 6.3 6.7 6.1 5.3 7.0 1.4 3.0 4 0 0 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor DEAD PF00270.29 CCF72729.1 - 1.1e-29 103.5 0.8 7.8e-29 100.7 0.8 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72729.1 - 5.3e-17 62.2 0.3 1.6e-16 60.7 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72729.1 - 6e-05 23.1 0.1 9.7e-05 22.4 0.1 1.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SMC_N PF02463.19 CCF72729.1 - 0.1 12.1 0.1 0.17 11.3 0.1 1.4 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA PF00004.29 CCF72729.1 - 0.12 12.8 0.2 0.54 10.7 0.1 2.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Flo11 PF10182.9 CCF72731.1 - 0.016 15.4 0.4 0.02 15.0 0.4 1.1 1 0 0 1 1 1 0 Flo11 domain RRM_1 PF00076.22 CCF72732.1 - 2.5e-12 46.4 0.0 3.6e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM PF05172.13 CCF72732.1 - 0.004 17.1 0.0 0.0058 16.6 0.0 1.4 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_8 PF11835.8 CCF72732.1 - 0.0086 16.3 0.0 0.014 15.6 0.0 1.3 1 0 0 1 1 1 1 RRM-like domain SPOR PF05036.13 CCF72732.1 - 0.066 13.6 0.0 0.09 13.2 0.0 1.2 1 0 0 1 1 1 0 Sporulation related domain RRM_occluded PF16842.5 CCF72732.1 - 0.12 12.2 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Occluded RNA-recognition motif RRM_5 PF13893.6 CCF72732.1 - 0.22 11.1 0.1 0.22 11.1 0.1 2.0 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AAA_12 PF13087.6 CCF72734.1 - 1.1e-58 198.2 0.0 4.7e-58 196.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 CCF72734.1 - 5.4e-50 170.6 0.1 4.8e-26 92.1 0.3 2.5 1 1 1 2 2 2 2 AAA domain AAA_19 PF13245.6 CCF72734.1 - 1e-08 35.7 0.2 0.0024 18.2 0.3 2.9 2 2 1 3 3 3 2 AAA domain AAA_30 PF13604.6 CCF72734.1 - 2e-08 34.2 0.0 0.0016 18.2 0.0 2.6 2 1 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 CCF72734.1 - 1.1e-07 31.9 0.6 0.0072 16.1 0.0 4.0 4 0 0 4 4 4 2 Viral (Superfamily 1) RNA helicase AAA_23 PF13476.6 CCF72734.1 - 0.00074 20.1 0.8 0.0014 19.1 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CCF72734.1 - 0.0015 18.2 0.0 0.0038 16.9 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain T2SSE PF00437.20 CCF72734.1 - 0.0019 17.3 0.0 0.0035 16.4 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein DEAD PF00270.29 CCF72734.1 - 0.002 17.9 0.0 0.0048 16.7 0.0 1.7 1 1 0 1 1 1 1 DEAD/DEAH box helicase cobW PF02492.19 CCF72734.1 - 0.011 15.4 1.1 0.077 12.6 0.0 2.7 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 CCF72734.1 - 0.013 15.7 0.4 0.1 12.9 0.1 2.6 3 0 0 3 3 3 0 AAA domain AAA_25 PF13481.6 CCF72734.1 - 0.026 14.1 0.0 0.045 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain ResIII PF04851.15 CCF72734.1 - 0.033 14.2 0.0 0.1 12.6 0.0 1.8 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Rad17 PF03215.15 CCF72734.1 - 0.034 14.1 0.2 0.13 12.2 0.1 2.0 2 0 0 2 2 2 0 Rad17 P-loop domain UvrD_C_2 PF13538.6 CCF72734.1 - 0.082 12.8 0.2 14 5.6 0.0 2.6 2 0 0 2 2 2 0 UvrD-like helicase C-terminal domain UvrD_C PF13361.6 CCF72734.1 - 0.089 12.2 0.1 5.1 6.4 0.0 2.6 3 0 0 3 3 3 0 UvrD-like helicase C-terminal domain NACHT PF05729.12 CCF72734.1 - 0.09 12.7 0.0 0.3 11.0 0.0 1.8 2 0 0 2 2 2 0 NACHT domain AAA_16 PF13191.6 CCF72734.1 - 0.12 12.7 0.0 0.29 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 CCF72734.1 - 0.14 12.7 0.0 0.36 11.3 0.0 1.7 1 0 0 1 1 1 0 ABC transporter AnfG_VnfG PF03139.15 CCF72735.1 - 0.0099 16.0 0.0 0.012 15.7 0.0 1.1 1 0 0 1 1 1 1 Vanadium/alternative nitrogenase delta subunit Filament PF00038.21 CCF72736.1 - 0.082 12.5 1.4 0.31 10.6 0.1 2.0 2 0 0 2 2 2 0 Intermediate filament protein Baculo_PEP_C PF04513.12 CCF72736.1 - 0.093 12.8 7.6 0.05 13.6 4.9 1.8 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus NOG1 PF06858.14 CCF72736.1 - 0.1 12.4 1.4 7.4 6.4 0.0 3.1 2 1 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) APG17 PF04108.12 CCF72736.1 - 0.4 9.7 4.9 0.34 10.0 2.3 1.9 1 1 1 2 2 2 0 Autophagy protein Apg17 Interferon PF00143.19 CCF72736.1 - 0.87 9.8 4.5 0.56 10.4 0.3 2.2 2 0 0 2 2 2 0 Interferon alpha/beta domain TFIIE_beta PF02186.15 CCF72737.1 - 1.2e-07 31.9 0.1 2.7e-07 30.8 0.1 1.6 1 0 0 1 1 1 1 TFIIE beta subunit core domain DUF5492 PF17596.2 CCF72737.1 - 0.061 13.6 0.1 0.19 12.0 0.1 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5492) LicD PF04991.13 CCF72739.1 - 0.35 11.0 2.9 5.3 7.1 0.1 2.4 2 0 0 2 2 2 0 LicD family DUF1410 PF07198.11 CCF72740.1 - 0.062 13.8 2.6 0.3 11.6 2.6 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1410) AAA_31 PF13614.6 CCF72742.1 - 0.63 9.9 5.4 1 9.3 5.2 1.5 1 1 0 1 1 1 0 AAA domain SET PF00856.28 CCF72743.1 - 3.8e-07 30.7 0.0 4.9e-06 27.0 0.0 2.2 1 1 0 1 1 1 1 SET domain DUF2170 PF09938.9 CCF72743.1 - 0.11 12.2 0.1 0.26 11.0 0.1 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) zf-C3HC4_2 PF13923.6 CCF72744.1 - 3.5e-08 33.1 8.4 7.8e-08 32.0 8.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF72744.1 - 0.00015 21.7 3.1 0.00015 21.7 3.1 2.7 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 CCF72744.1 - 0.00016 21.4 8.9 0.00016 21.4 8.9 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 CCF72744.1 - 0.00018 21.3 8.0 0.00034 20.4 8.0 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF72744.1 - 0.001 19.0 10.8 0.003 17.5 10.8 1.9 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_6 PF14835.6 CCF72744.1 - 0.0016 18.3 1.4 0.043 13.7 3.6 2.1 2 0 0 2 2 2 1 zf-RING of BARD1-type protein zf-RING_2 PF13639.6 CCF72744.1 - 0.0024 18.2 8.2 0.0056 17.0 8.2 1.7 1 0 0 1 1 1 1 Ring finger domain Prok-RING_4 PF14447.6 CCF72744.1 - 0.018 14.9 9.3 0.046 13.6 8.9 1.9 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 CCF72744.1 - 0.09 13.0 7.0 0.3 11.3 7.1 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-Nse PF11789.8 CCF72744.1 - 0.25 11.2 5.9 0.73 9.7 5.9 1.7 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_10 PF16685.5 CCF72744.1 - 0.28 11.4 6.4 0.79 9.9 6.4 1.8 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-TFIIB PF13453.6 CCF72744.1 - 0.43 10.0 3.3 8.4 5.8 0.7 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-piccolo PF05715.13 CCF72744.1 - 2.5 8.3 10.4 0.16 12.2 1.3 2.5 2 0 0 2 2 2 0 Piccolo Zn-finger PUB PF09409.10 CCF72745.1 - 7e-08 32.3 0.0 1.7e-07 31.1 0.0 1.6 1 0 0 1 1 1 1 PUB domain DNA_ligase_A_M PF01068.21 CCF72746.1 - 9.2e-61 205.0 1.1 1.3e-60 204.6 0.3 1.7 2 0 0 2 2 2 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 CCF72746.1 - 4.7e-33 114.9 0.6 7.4e-33 114.3 0.1 1.6 2 0 0 2 2 2 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 CCF72746.1 - 1.6e-24 86.4 0.0 3.4e-24 85.3 0.0 1.6 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 CCF72746.1 - 9.1e-06 26.1 0.5 1.7e-05 25.2 0.5 1.5 1 0 0 1 1 1 1 RNA ligase DUF4333 PF14230.6 CCF72746.1 - 0.092 13.0 0.0 5.3 7.3 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4333) EF1G PF00647.19 CCF72746.1 - 0.16 12.1 1.1 3.6 7.7 0.1 2.8 2 0 0 2 2 2 0 Elongation factor 1 gamma, conserved domain CorA PF01544.18 CCF72747.1 - 0.0085 15.4 6.9 0.079 12.3 0.8 3.1 3 0 0 3 3 3 2 CorA-like Mg2+ transporter protein Elf1 PF05129.13 CCF72748.1 - 1.9e-26 91.9 1.2 3.7e-26 91.0 1.2 1.5 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Cys_rich_CPXG PF14255.6 CCF72748.1 - 0.015 15.2 0.6 0.031 14.2 0.6 1.6 1 0 0 1 1 1 0 Cysteine-rich CPXCG Lar_restr_allev PF14354.6 CCF72748.1 - 0.021 15.2 0.1 0.049 14.0 0.1 1.6 1 0 0 1 1 1 0 Restriction alleviation protein Lar YABBY PF04690.13 CCF72748.1 - 0.058 14.0 1.8 0.1 13.2 1.8 1.4 1 1 0 1 1 1 0 YABBY protein zf-Di19 PF05605.12 CCF72748.1 - 0.17 12.2 3.8 0.55 10.6 3.8 1.8 1 1 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding zf-Mss51 PF13824.6 CCF72748.1 - 0.45 10.7 2.7 0.39 10.8 0.9 1.8 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Sld5 PF05916.11 CCF72749.1 - 2.7e-06 27.8 0.1 5.1e-06 26.9 0.1 1.5 1 0 0 1 1 1 1 GINS complex protein MFS_1 PF07690.16 CCF72750.1 - 1e-15 57.5 21.5 1.2e-15 57.3 20.0 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_2 PF13347.6 CCF72750.1 - 0.0039 15.8 2.0 0.0039 15.8 2.0 3.3 2 1 1 3 3 3 3 MFS/sugar transport protein Sugar_tr PF00083.24 CCF72750.1 - 0.093 11.6 23.4 0.0047 15.8 6.2 3.4 1 1 1 3 3 3 0 Sugar (and other) transporter UQ_con PF00179.26 CCF72751.1 - 1.2e-44 151.4 0.0 1.3e-44 151.2 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 CCF72751.1 - 0.021 14.6 0.0 0.026 14.2 0.0 1.1 1 0 0 1 1 1 0 Prokaryotic E2 family B Pyr_redox_2 PF07992.14 CCF72752.1 - 1.9e-40 139.0 0.0 2.5e-40 138.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CCF72752.1 - 2.9e-11 43.8 0.0 7e-07 29.7 0.1 2.9 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CCF72752.1 - 0.19 10.9 0.7 9.6 5.4 0.3 2.6 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Ank_2 PF12796.7 CCF72753.1 - 5.1e-13 49.4 1.0 4.4e-10 40.0 0.1 2.6 3 1 1 4 4 4 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 CCF72753.1 - 1.3e-12 47.9 2.3 5.9e-07 29.9 0.1 3.1 1 1 3 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 CCF72753.1 - 3.5e-10 39.2 1.1 0.029 14.9 0.0 4.9 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 CCF72753.1 - 4.3e-08 33.3 0.2 4e-05 23.8 0.1 3.1 3 1 1 4 4 4 2 Ankyrin repeats (many copies) Ank PF00023.30 CCF72753.1 - 6.1e-05 23.3 6.9 0.29 11.6 0.1 4.3 4 1 0 4 4 4 2 Ankyrin repeat DUF2183 PF09949.9 CCF72755.1 - 6.5e-06 26.4 0.0 1.4e-05 25.3 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2183) TPT PF03151.16 CCF72756.1 - 1.6e-84 283.7 22.7 2e-84 283.4 22.7 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 CCF72756.1 - 6.2e-07 29.7 30.4 0.00019 21.6 11.9 2.2 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 CCF72756.1 - 0.048 12.9 17.5 0.073 12.3 17.5 1.4 1 1 0 1 1 1 0 UAA transporter family Uso1_p115_head PF04869.14 CCF72756.1 - 0.093 11.8 0.5 0.16 11.1 0.5 1.3 1 1 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, head region RCC1 PF00415.18 CCF72757.1 - 1.2e-79 262.8 43.8 6.5e-12 45.9 0.1 14.2 13 3 0 13 13 13 10 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 CCF72757.1 - 6.5e-40 134.2 79.5 4.8e-07 29.4 1.5 14.0 14 0 0 14 14 14 12 Regulator of chromosome condensation (RCC1) repeat Hira PF07569.11 CCF72757.1 - 0.031 14.0 0.8 3.3 7.4 0.0 4.1 4 1 1 5 5 5 0 TUP1-like enhancer of split Kelch_2 PF07646.15 CCF72757.1 - 1 9.4 14.9 88 3.3 0.0 6.7 7 0 0 7 7 7 0 Kelch motif DEAD PF00270.29 CCF72758.1 - 1e-44 152.4 0.0 1.9e-44 151.5 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72758.1 - 6.5e-25 87.6 0.0 1.6e-24 86.3 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72758.1 - 0.00019 21.5 0.0 0.0011 19.0 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-CCHC_3 PF13917.6 CCF72759.1 - 7e-06 25.9 0.0 1.1e-05 25.3 0.0 1.3 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC PF00098.23 CCF72759.1 - 0.00081 19.4 1.6 0.0014 18.6 1.6 1.4 1 0 0 1 1 1 1 Zinc knuckle CpXC PF14353.6 CCF72759.1 - 0.016 15.3 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 CpXC protein G6PD_C PF02781.16 CCF72760.1 - 4.1e-41 141.1 0.1 1.8e-27 96.3 0.0 2.3 2 0 0 2 2 2 2 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 CCF72760.1 - 2.5e-33 116.2 0.0 4.6e-33 115.3 0.0 1.4 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain Glucosamine_iso PF01182.20 CCF72760.1 - 4.4e-33 115.1 0.0 7.3e-33 114.3 0.0 1.3 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Pih1_fungal_CS PF18482.1 CCF72760.1 - 0.065 13.8 0.3 0.25 11.9 0.1 2.0 2 0 0 2 2 2 0 Fungal Pih1 CS domain DUF410 PF04190.13 CCF72761.1 - 1.3e-22 80.8 0.4 1.5e-22 80.7 0.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF410) 7TM_GPCR_Srz PF10325.9 CCF72761.1 - 0.068 12.5 0.1 0.11 11.7 0.1 1.3 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srz Beta-Casp PF10996.8 CCF72762.1 - 2.4e-26 92.2 0.0 4.4e-26 91.3 0.0 1.5 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 CCF72762.1 - 3.5e-17 62.1 0.0 6.1e-17 61.3 0.0 1.4 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 CCF72762.1 - 7.6e-17 61.4 0.0 1.5e-16 60.4 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 CCF72762.1 - 4.6e-14 52.9 0.1 2.1e-13 50.7 0.1 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily CPSF73-100_C PF11718.8 CCF72762.1 - 1e-08 35.0 0.0 1.8e-07 30.9 0.0 2.1 1 1 0 1 1 1 1 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term Beta_lactamase3 PF17030.5 CCF72762.1 - 3.5e-05 23.1 0.0 8.1e-05 21.9 0.0 1.6 1 0 0 1 1 1 1 Putative beta-lactamase-like family Lactamase_B_3 PF13483.6 CCF72762.1 - 5.2e-05 23.2 0.0 0.0004 20.3 0.0 2.1 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 CCF72762.1 - 0.00016 21.3 0.0 0.002 17.7 0.0 2.4 2 1 0 2 2 2 1 Beta-lactamase superfamily domain HSP20 PF00011.21 CCF72764.1 - 1.6e-11 44.2 0.0 2.8e-11 43.5 0.0 1.3 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 CCF72764.1 - 6.9e-05 22.3 0.0 0.0001 21.8 0.0 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA DUF3519 PF12033.8 CCF72764.1 - 0.14 12.5 1.0 0.56 10.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3519) Lung_7-TM_R PF06814.13 CCF72765.1 - 1.1e-07 31.4 25.8 1.8e-07 30.8 25.8 1.2 1 0 0 1 1 1 1 Lung seven transmembrane receptor Vma12 PF11712.8 CCF72765.1 - 0.76 9.8 4.9 0.71 9.9 3.2 1.7 1 1 0 1 1 1 0 Endoplasmic reticulum-based factor for assembly of V-ATPase Hist_deacetyl PF00850.19 CCF72766.1 - 1.1e-59 202.5 0.0 2.4e-59 201.3 0.0 1.6 1 0 0 1 1 1 1 Histone deacetylase domain Ank_4 PF13637.6 CCF72766.1 - 4.1e-11 43.2 1.4 0.00012 22.6 1.2 3.1 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 CCF72766.1 - 1.3e-08 35.3 0.1 0.013 16.1 0.0 3.2 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 CCF72766.1 - 2e-05 24.6 0.4 1.6 9.6 0.0 4.9 4 0 0 4 4 4 1 Ankyrin repeat Ank_5 PF13857.6 CCF72766.1 - 0.00072 19.8 0.1 0.035 14.4 0.0 3.1 2 0 0 2 2 2 1 Ankyrin repeats (many copies) Ank PF00023.30 CCF72766.1 - 0.077 13.5 0.1 1.3 9.6 0.0 3.2 2 0 0 2 2 2 0 Ankyrin repeat P3A PF08727.11 CCF72766.1 - 0.29 10.5 0.0 0.29 10.5 0.0 3.0 3 0 0 3 3 3 0 Poliovirus 3A protein like Tom37 PF10568.9 CCF72768.1 - 2.6 8.4 6.7 5.9 7.2 0.3 3.8 4 0 0 4 4 4 0 Outer mitochondrial membrane transport complex protein Phage_int_SAM_5 PF13102.6 CCF72768.1 - 5.3 7.4 9.7 7.7 6.9 0.2 4.1 4 0 0 4 4 4 0 Phage integrase SAM-like domain Methyltr_RsmB-F PF01189.17 CCF72769.1 - 2.4e-23 82.9 0.2 4.7e-23 81.9 0.2 1.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 CCF72769.1 - 1.8e-05 24.5 0.0 3.9e-05 23.5 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF72769.1 - 0.002 18.8 0.0 0.0084 16.8 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain N6_Mtase PF02384.16 CCF72769.1 - 0.099 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 N-6 DNA Methylase UCH PF00443.29 CCF72771.1 - 3.4e-41 141.5 0.0 5e-41 140.9 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 CCF72771.1 - 2.3e-12 47.1 0.0 1.9e-06 27.7 0.0 2.7 2 1 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase USP7_C2 PF14533.6 CCF72771.1 - 1.9e-06 27.8 0.0 4.6e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-specific protease C-terminal SNF2_N PF00176.23 CCF72772.1 - 2.1e-27 95.8 0.1 3.9e-27 94.9 0.1 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF72772.1 - 5.6e-13 49.2 0.1 1.8e-11 44.3 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72772.1 - 7.3e-05 22.8 0.5 0.00057 19.9 0.0 2.8 3 1 0 3 3 3 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CCF72772.1 - 0.029 13.6 0.1 0.096 11.9 0.1 1.9 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase DUSP PF06337.12 CCF72772.1 - 0.031 14.9 1.1 0.11 13.1 0.1 2.4 2 0 0 2 2 2 0 DUSP domain S1 PF00575.23 CCF72774.1 - 1.5e-13 50.9 0.0 3.8e-06 27.1 0.0 2.7 2 0 0 2 2 2 2 S1 RNA binding domain Fasciclin PF02469.22 CCF72775.1 - 1.5e-13 51.1 0.0 3.6e-13 49.8 0.0 1.6 1 1 0 1 1 1 1 Fasciclin domain Ribosomal_L7Ae PF01248.26 CCF72776.1 - 2.2e-23 81.8 0.0 2.9e-23 81.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family T3SSipB PF16535.5 CCF72776.1 - 0.052 14.0 0.2 0.065 13.7 0.2 1.1 1 0 0 1 1 1 0 Type III cell invasion protein SipB Amidase PF01425.21 CCF72777.1 - 4e-71 240.3 0.0 5.2e-71 239.9 0.0 1.1 1 0 0 1 1 1 1 Amidase RecO_N_2 PF13114.6 CCF72777.1 - 0.26 11.0 2.2 0.5 10.1 0.3 2.4 3 0 0 3 3 3 0 RecO N terminal CLU_N PF15044.6 CCF72777.1 - 0.41 11.1 3.3 0.62 10.5 1.0 2.3 1 1 0 2 2 2 0 Mitochondrial function, CLU-N-term ERO1 PF04137.15 CCF72778.1 - 1.3e-62 212.1 2.8 1.5e-62 211.9 2.8 1.0 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Beach PF02138.18 CCF72779.1 - 9.7e-92 307.2 0.0 1.5e-91 306.6 0.0 1.3 1 0 0 1 1 1 1 Beige/BEACH domain PH_BEACH PF14844.6 CCF72779.1 - 0.039 14.0 0.8 2.5 8.2 0.0 3.2 3 1 0 3 3 3 0 PH domain associated with Beige/BEACH PPR_2 PF13041.6 CCF72780.1 - 2.6e-63 210.0 28.0 6.2e-16 58.3 0.3 10.2 2 1 8 10 10 10 9 PPR repeat family PPR PF01535.20 CCF72780.1 - 1.6e-48 159.6 21.3 3.8e-06 26.8 0.0 10.4 11 0 0 11 11 11 8 PPR repeat PPR_1 PF12854.7 CCF72780.1 - 5e-46 154.1 14.6 8.7e-09 34.9 0.1 9.5 9 0 0 9 9 9 8 PPR repeat PPR_3 PF13812.6 CCF72780.1 - 5.4e-40 135.3 5.9 2.9e-10 40.1 0.5 6.1 3 1 2 6 6 6 6 Pentatricopeptide repeat domain PPR_long PF17177.4 CCF72780.1 - 1.5e-24 86.5 0.0 4.3e-13 49.1 0.0 4.3 2 1 2 4 4 4 4 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 CCF72780.1 - 4.9e-08 32.8 4.7 0.0016 18.3 0.0 5.6 4 2 0 5 5 5 2 Mitochondrial ATPase expression MRP-S27 PF10037.9 CCF72780.1 - 0.00021 20.3 1.8 0.91 8.3 0.1 4.3 2 1 2 4 4 4 2 Mitochondrial 28S ribosomal protein S27 Clathrin PF00637.20 CCF72780.1 - 0.012 15.5 11.1 8 6.3 0.2 5.7 4 1 2 6 6 6 0 Region in Clathrin and VPS ECSIT PF06239.11 CCF72780.1 - 0.012 14.8 0.2 19 4.3 0.1 4.2 4 0 0 4 4 4 0 Evolutionarily conserved signalling intermediate in Toll pathway Tmemb_cc2 PF10267.9 CCF72780.1 - 0.91 8.6 7.2 0.51 9.4 1.1 2.2 2 0 0 2 2 2 0 Predicted transmembrane and coiled-coil 2 protein DUF2508 PF10704.9 CCF72780.1 - 3.6 7.8 7.3 10 6.4 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF2508) DZR PF12773.7 CCF72781.1 - 0.0033 17.4 0.3 0.0053 16.8 0.3 1.3 1 0 0 1 1 1 1 Double zinc ribbon Nudix_N_2 PF14803.6 CCF72781.1 - 0.005 16.7 0.2 0.94 9.5 0.0 2.5 2 0 0 2 2 2 2 Nudix N-terminal NOB1_Zn_bind PF08772.11 CCF72781.1 - 0.0064 16.6 0.2 0.011 15.9 0.2 1.3 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zf-C6H2 PF15801.5 CCF72781.1 - 0.019 15.3 2.0 0.034 14.4 2.0 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding zf-ribbon_3 PF13248.6 CCF72781.1 - 0.079 12.4 1.3 0.17 11.4 1.3 1.5 1 0 0 1 1 1 0 zinc-ribbon domain RMI1_N PF08585.12 CCF72782.1 - 0.04 13.7 0.0 0.04 13.7 0.0 2.5 3 0 0 3 3 3 0 RecQ mediated genome instability protein BT1 PF03092.16 CCF72783.1 - 6.4e-60 202.9 23.0 1e-39 136.2 12.2 2.1 1 1 1 2 2 2 2 BT1 family PUCC PF03209.15 CCF72783.1 - 0.31 10.0 8.5 0.027 13.5 1.1 2.5 2 1 0 2 2 2 0 PUCC protein Band_7 PF01145.25 CCF72784.1 - 2.6e-25 89.5 0.1 3.6e-25 89.0 0.1 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family YdfA_immunity PF12127.8 CCF72784.1 - 0.0017 17.5 2.4 0.0023 17.0 2.4 1.1 1 0 0 1 1 1 1 SigmaW regulon antibacterial DUF211 PF02680.14 CCF72784.1 - 0.1 12.8 0.3 0.2 11.8 0.3 1.5 1 0 0 1 1 1 0 Uncharacterized ArCR, COG1888 60KD_IMP PF02096.20 CCF72785.1 - 2.7e-08 33.9 2.6 7.5e-08 32.4 2.6 1.7 1 1 0 1 1 1 1 60Kd inner membrane protein DUF4381 PF14316.6 CCF72785.1 - 0.054 13.7 0.1 0.16 12.2 0.2 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4381) tRNA-synt_1 PF00133.22 CCF72787.1 - 3e-36 124.9 6.1 2.9e-22 78.7 0.2 5.0 4 1 0 4 4 4 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 CCF72787.1 - 2e-25 89.4 0.7 4.4e-16 58.6 0.0 4.4 4 1 1 5 5 5 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 CCF72787.1 - 9.2e-12 44.9 0.0 1.9e-11 43.8 0.0 1.5 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 Anticodon_1 PF08264.13 CCF72787.1 - 1e-10 41.8 1.0 2e-10 40.8 0.2 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 CCF72787.1 - 0.00086 18.7 1.4 1.3 8.3 0.0 2.9 3 1 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 CCF72787.1 - 0.08 11.8 0.0 0.15 10.9 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (K) AP2 PF00847.20 CCF72788.1 - 0.021 15.1 0.5 0.021 15.1 0.5 2.0 2 0 0 2 2 2 0 AP2 domain LSM PF01423.22 CCF72789.1 - 4.1e-16 58.4 0.4 5.1e-16 58.1 0.4 1.1 1 0 0 1 1 1 1 LSM domain Thioredoxin PF00085.20 CCF72790.1 - 7.3e-43 144.8 0.2 1.8e-24 85.7 0.0 2.7 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_6 PF13848.6 CCF72790.1 - 4.7e-16 59.2 6.0 2.2e-11 44.0 0.5 3.0 2 1 1 3 3 3 2 Thioredoxin-like domain Thioredoxin_2 PF13098.6 CCF72790.1 - 8.5e-12 45.5 2.8 9.6e-07 29.2 0.4 3.8 2 2 0 2 2 2 2 Thioredoxin-like domain AhpC-TSA PF00578.21 CCF72790.1 - 4.3e-07 29.9 0.2 0.014 15.3 0.0 3.3 4 0 0 4 4 4 2 AhpC/TSA family OST3_OST6 PF04756.13 CCF72790.1 - 3.7e-05 23.2 0.2 0.067 12.5 0.0 2.7 3 0 0 3 3 3 2 OST3 / OST6 family, transporter family TraF PF13728.6 CCF72790.1 - 0.00019 21.3 0.1 0.094 12.5 0.0 2.3 2 0 0 2 2 2 2 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 CCF72790.1 - 0.00083 19.6 0.0 2 8.8 0.0 3.2 3 0 0 3 3 3 2 Thioredoxin-like Thioredoxin_7 PF13899.6 CCF72790.1 - 0.0029 17.7 0.0 3.7 7.8 0.0 2.8 2 0 0 2 2 2 2 Thioredoxin-like Thioredoxin_3 PF13192.6 CCF72790.1 - 0.022 14.8 0.1 1.1 9.3 0.0 2.7 2 0 0 2 2 2 0 Thioredoxin domain Redoxin PF08534.10 CCF72790.1 - 0.023 14.4 0.0 9.6 5.9 0.0 2.7 2 0 0 2 2 2 0 Redoxin Ribonuc_red_lgN PF00317.21 CCF72790.1 - 0.025 14.6 0.0 0.098 12.7 0.0 2.0 1 1 0 1 1 1 0 Ribonucleotide reductase, all-alpha domain Thioredoxin_4 PF13462.6 CCF72790.1 - 0.038 14.2 1.5 2.6 8.2 0.1 2.9 2 1 0 3 3 3 0 Thioredoxin Thioredoxin_9 PF14595.6 CCF72790.1 - 0.066 13.0 0.1 4.1 7.2 0.0 2.5 2 0 0 2 2 2 0 Thioredoxin PSI_integrin PF17205.3 CCF72790.1 - 0.11 12.3 0.4 6.3 6.6 0.0 2.3 2 0 0 2 2 2 0 Integrin plexin domain NMD3 PF04981.13 CCF72790.1 - 0.18 11.3 0.1 0.91 8.9 0.0 2.1 3 0 0 3 3 3 0 NMD3 family SAD_SRA PF02182.17 CCF72791.1 - 4.2e-15 55.8 0.0 9.6e-15 54.6 0.0 1.6 1 0 0 1 1 1 1 SAD/SRA domain SET PF00856.28 CCF72791.1 - 1.2e-13 51.8 0.1 5.6e-13 49.6 0.1 2.2 1 1 0 1 1 1 1 SET domain Pre-SET PF05033.16 CCF72791.1 - 1.7e-10 41.5 0.5 8.5e-10 39.3 0.5 2.3 1 0 0 1 1 1 1 Pre-SET motif Prenyltransf PF01255.19 CCF72792.1 - 7.4e-60 202.3 0.2 9.1e-60 202.0 0.2 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DUF3339 PF11820.8 CCF72792.1 - 0.032 14.4 0.1 0.08 13.1 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3339) ATP13 PF12921.7 CCF72792.1 - 0.051 13.4 0.0 0.11 12.4 0.0 1.5 1 0 0 1 1 1 0 Mitochondrial ATPase expression Rho_N PF07498.12 CCF72792.1 - 0.13 12.3 0.0 0.46 10.5 0.0 1.9 2 0 0 2 2 2 0 Rho termination factor, N-terminal domain SPRY PF00622.28 CCF72793.1 - 1.1e-08 35.3 0.5 7.8e-05 22.8 0.1 2.6 2 1 0 2 2 2 2 SPRY domain DNA_primase_lrg PF04104.14 CCF72794.1 - 1.4e-63 214.8 0.0 2.2e-63 214.2 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit DIM1 PF02966.16 CCF72795.1 - 2.8e-65 218.1 0.1 3.2e-65 217.9 0.1 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin PF00085.20 CCF72795.1 - 0.0043 17.0 0.0 0.0059 16.6 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin GidB PF02527.15 CCF72795.1 - 0.13 11.6 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G ParA PF10609.9 CCF72796.1 - 4.5e-77 258.8 0.3 5.5e-77 258.5 0.3 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 CCF72796.1 - 5.4e-15 55.6 0.0 1.8e-14 53.9 0.0 1.8 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 CCF72796.1 - 5.8e-09 36.1 0.7 1.6e-07 31.4 0.7 2.4 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 CCF72796.1 - 1.4e-06 27.8 0.0 4.6e-06 26.1 0.0 1.7 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 CCF72796.1 - 1.9e-06 27.3 0.3 3.9e-06 26.3 0.1 1.7 2 0 0 2 2 2 1 Anion-transporting ATPase AAA_26 PF13500.6 CCF72796.1 - 0.00015 21.6 0.1 0.022 14.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain Fer4_NifH PF00142.18 CCF72796.1 - 0.00016 21.2 0.7 0.16 11.4 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family MeaB PF03308.16 CCF72796.1 - 0.0029 16.7 0.1 0.0044 16.0 0.1 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NB-ARC PF00931.22 CCF72796.1 - 0.0097 15.1 0.4 0.03 13.5 0.1 2.0 2 0 0 2 2 2 1 NB-ARC domain CBP_BcsQ PF06564.12 CCF72796.1 - 0.014 14.9 0.5 0.066 12.7 0.5 2.0 1 1 0 1 1 1 0 Cellulose biosynthesis protein BcsQ CLP1_P PF16575.5 CCF72796.1 - 0.06 13.1 0.1 0.64 9.8 0.0 2.1 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DDE_Tnp_1_6 PF13751.6 CCF72796.1 - 0.062 13.5 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Transposase DDE domain APS_kinase PF01583.20 CCF72796.1 - 0.13 12.2 0.2 0.21 11.5 0.2 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase SRP54 PF00448.22 CCF72796.1 - 0.13 11.8 0.1 0.28 10.8 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain MORN PF02493.20 CCF72797.1 - 3.1e-07 29.9 2.2 6.5e-05 22.6 0.4 2.5 2 0 0 2 2 2 2 MORN repeat Ribosomal_S28e PF01200.18 CCF72798.1 - 3.3e-32 110.3 0.9 3.6e-32 110.1 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e S4 PF01479.25 CCF72799.1 - 5.6e-11 42.0 0.0 1.1e-10 41.0 0.0 1.5 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 CCF72799.1 - 3.1e-07 31.2 4.5 4.8e-07 30.6 4.3 1.5 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain DHquinase_II PF01220.19 CCF72799.1 - 0.058 13.1 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 Dehydroquinase class II SHOCT PF09851.9 CCF72799.1 - 0.066 13.0 0.3 0.34 10.7 0.1 2.3 2 0 0 2 2 2 0 Short C-terminal domain RBFA PF02033.18 CCF72800.1 - 1e-14 54.9 0.0 4.6e-14 52.7 0.0 2.1 1 0 0 1 1 1 1 Ribosome-binding factor A Mito_carr PF00153.27 CCF72801.1 - 3.8e-40 135.7 7.8 4.7e-13 48.9 0.1 4.2 4 1 0 4 4 4 3 Mitochondrial carrier protein AAA PF00004.29 CCF72802.1 - 3.7e-15 56.5 0.2 9.2e-15 55.2 0.1 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) Rep_fac_C PF08542.11 CCF72802.1 - 5.1e-12 46.0 0.0 1.5e-11 44.5 0.0 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.6 CCF72802.1 - 9.8e-12 44.9 0.5 1.4e-10 41.2 0.6 2.2 1 1 1 2 2 2 1 DNA polymerase III, delta subunit AAA_14 PF13173.6 CCF72802.1 - 1.4e-07 31.6 0.0 2.5e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 CCF72802.1 - 3.4e-07 30.3 0.1 4.3e-07 30.0 0.1 1.2 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 CCF72802.1 - 2e-06 27.7 0.0 3e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_22 PF13401.6 CCF72802.1 - 2.9e-05 24.4 1.1 0.037 14.3 0.1 2.8 1 1 2 3 3 3 2 AAA domain AAA_24 PF13479.6 CCF72802.1 - 4.8e-05 23.2 0.0 9.2e-05 22.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 CCF72802.1 - 7.1e-05 22.6 0.4 0.00086 19.1 0.4 2.6 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Rad17 PF03215.15 CCF72802.1 - 0.00012 22.1 0.4 0.00087 19.3 0.0 2.5 2 1 1 3 3 3 1 Rad17 P-loop domain AAA_16 PF13191.6 CCF72802.1 - 0.00018 21.9 0.1 0.042 14.2 0.0 2.4 1 1 1 2 2 2 1 AAA ATPase domain AAA_assoc_2 PF16193.5 CCF72802.1 - 0.00026 21.3 0.0 0.0016 18.7 0.0 2.2 1 1 1 2 2 2 1 AAA C-terminal domain DUF2247 PF10004.9 CCF72802.1 - 0.00049 19.9 0.3 0.0021 17.9 0.1 2.2 3 0 0 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2247) AAA_30 PF13604.6 CCF72802.1 - 0.0012 18.6 0.0 0.0022 17.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain DNA_pol3_delta PF06144.13 CCF72802.1 - 0.0026 17.5 0.3 0.0044 16.8 0.3 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit MCM PF00493.23 CCF72802.1 - 0.0028 16.8 0.1 0.0038 16.4 0.1 1.3 1 0 0 1 1 1 1 MCM P-loop domain AAA_19 PF13245.6 CCF72802.1 - 0.004 17.5 1.3 0.036 14.4 1.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 CCF72802.1 - 0.0046 17.0 0.3 0.021 14.8 0.3 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) DEAD PF00270.29 CCF72802.1 - 0.007 16.2 0.8 0.45 10.3 0.2 2.6 1 1 1 2 2 2 1 DEAD/DEAH box helicase Mg_chelatase PF01078.21 CCF72802.1 - 0.0071 15.7 0.3 0.2 11.0 0.1 2.2 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 CCF72802.1 - 0.009 15.9 0.0 0.019 14.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 CCF72802.1 - 0.015 15.7 0.1 0.054 13.9 0.1 2.0 1 1 0 1 1 1 0 RNA helicase AAA_25 PF13481.6 CCF72802.1 - 0.017 14.7 0.4 0.15 11.6 0.4 2.2 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CCF72802.1 - 0.022 15.3 0.0 0.067 13.7 0.0 1.9 1 1 1 2 2 2 0 AAA domain NTPase_1 PF03266.15 CCF72802.1 - 0.042 13.8 1.9 7 6.5 0.1 2.4 1 1 1 2 2 2 0 NTPase AAA_7 PF12775.7 CCF72802.1 - 0.052 13.1 0.1 0.11 11.9 0.0 1.6 1 1 0 1 1 1 0 P-loop containing dynein motor region Tap-RNA_bind PF09162.10 CCF72802.1 - 0.13 12.2 0.0 0.32 10.9 0.0 1.8 1 0 0 1 1 1 0 Tap, RNA-binding TniB PF05621.11 CCF72802.1 - 0.14 11.5 0.7 4.1 6.8 0.1 2.6 2 1 0 2 2 2 0 Bacterial TniB protein DUF2075 PF09848.9 CCF72802.1 - 0.15 11.3 0.6 1.5 8.0 0.5 2.0 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 CCF72802.1 - 0.35 10.2 2.2 4.9 6.4 1.8 2.7 2 1 0 2 2 2 0 KaiC DEAD PF00270.29 CCF72803.1 - 1.1e-34 119.8 0.2 1.1e-33 116.5 0.1 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72803.1 - 4e-20 72.2 0.0 1.7e-19 70.2 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72803.1 - 8.9e-06 25.8 0.5 2.2e-05 24.5 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit TPR_2 PF07719.17 CCF72804.1 - 6.4e-14 50.9 0.1 0.00038 20.3 0.0 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 CCF72804.1 - 3.4e-13 48.8 0.3 1.5e-05 24.6 0.0 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 CCF72804.1 - 1.2e-06 28.0 0.7 0.25 11.1 0.0 3.5 2 1 1 3 3 3 2 TPR repeat TPR_9 PF13371.6 CCF72804.1 - 1.9e-05 24.7 0.0 3.6e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 CCF72804.1 - 3.5e-05 23.9 0.5 0.83 10.2 0.0 3.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF72804.1 - 4.1e-05 23.8 0.4 0.3 11.4 0.0 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF72804.1 - 0.00042 20.3 0.8 5.5 7.5 0.0 4.0 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 CCF72804.1 - 0.0014 18.4 0.5 2.2 8.3 0.0 2.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 CCF72804.1 - 0.017 15.7 0.3 0.79 10.5 0.0 3.0 4 0 0 4 4 2 0 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF72804.1 - 0.018 15.3 2.0 0.058 13.6 0.5 2.2 1 1 1 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 CCF72804.1 - 0.038 13.2 0.0 2.1 7.5 0.0 2.0 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_7 PF13176.6 CCF72804.1 - 0.05 13.7 1.4 36 4.7 0.1 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_16 PF13432.6 CCF72804.1 - 0.069 13.8 0.0 5.3 7.8 0.0 2.9 1 1 2 3 3 3 0 Tetratricopeptide repeat Mnd1 PF03962.15 CCF72805.1 - 4.4e-05 23.7 0.1 0.00012 22.3 0.1 1.8 1 0 0 1 1 1 1 Mnd1 HTH domain GlnD_UR_UTase PF08335.11 CCF72805.1 - 0.045 13.9 0.2 0.065 13.3 0.2 1.3 1 0 0 1 1 1 0 GlnD PII-uridylyltransferase DUF382 PF04037.13 CCF72806.1 - 1.1e-52 177.5 3.5 1.1e-52 177.5 3.5 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF382) PSP PF04046.16 CCF72806.1 - 1.9e-20 72.5 2.0 4.6e-20 71.2 2.0 1.7 1 0 0 1 1 1 1 PSP Mnd1 PF03962.15 CCF72806.1 - 1.2e-05 25.5 0.1 0.00011 22.4 0.0 2.7 3 0 0 3 3 3 1 Mnd1 HTH domain CHCH PF06747.13 CCF72809.1 - 0.0056 16.8 0.9 0.0087 16.2 0.9 1.3 1 0 0 1 1 1 1 CHCH domain TIP49 PF06068.13 CCF72811.1 - 2.1e-139 464.6 8.5 7.2e-137 456.3 8.5 2.1 1 1 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 CCF72811.1 - 1.6e-15 57.0 1.9 3.6e-13 49.5 1.7 2.7 2 0 0 2 2 2 1 TIP49 AAA-lid domain RuvB_N PF05496.12 CCF72811.1 - 1.8e-11 44.1 0.4 1.2e-06 28.3 0.1 2.4 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA PF00004.29 CCF72811.1 - 8.1e-11 42.5 0.5 6.4e-07 29.9 0.1 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF72811.1 - 4.3e-09 36.8 0.1 0.002 18.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 CCF72811.1 - 5.6e-07 29.1 0.7 0.0016 17.8 0.4 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_16 PF13191.6 CCF72811.1 - 7.4e-07 29.7 0.2 4.4e-06 27.2 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_19 PF13245.6 CCF72811.1 - 4.7e-06 27.0 0.9 0.11 12.8 0.2 2.5 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 CCF72811.1 - 1.6e-05 25.4 0.1 0.00073 20.1 0.1 2.6 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 CCF72811.1 - 2.7e-05 24.2 0.1 0.033 14.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 CCF72811.1 - 6.5e-05 22.7 0.2 0.34 10.6 0.1 2.5 2 0 0 2 2 2 2 Sigma-54 interaction domain DnaB_C PF03796.15 CCF72811.1 - 0.00028 20.3 0.0 0.00059 19.2 0.0 1.5 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_14 PF13173.6 CCF72811.1 - 0.0004 20.4 0.1 0.85 9.7 0.0 2.7 2 0 0 2 2 2 2 AAA domain DUF2075 PF09848.9 CCF72811.1 - 0.0015 17.8 0.1 0.0042 16.4 0.0 1.7 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) PIF1 PF05970.14 CCF72811.1 - 0.0034 16.6 1.3 0.17 11.0 0.3 2.3 2 0 0 2 2 2 1 PIF1-like helicase AAA_30 PF13604.6 CCF72811.1 - 0.0038 17.0 0.8 0.34 10.6 0.2 2.3 2 0 0 2 2 2 1 AAA domain APS_kinase PF01583.20 CCF72811.1 - 0.0048 16.8 0.2 0.015 15.2 0.0 1.9 2 0 0 2 2 1 1 Adenylylsulphate kinase Zeta_toxin PF06414.12 CCF72811.1 - 0.0063 15.8 0.1 0.017 14.4 0.1 1.7 1 0 0 1 1 1 1 Zeta toxin AAA_25 PF13481.6 CCF72811.1 - 0.0067 16.0 0.1 0.016 14.8 0.1 1.6 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 CCF72811.1 - 0.012 15.7 0.4 0.64 10.0 0.1 2.5 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_17 PF13207.6 CCF72811.1 - 0.013 15.9 0.4 0.12 12.8 0.0 2.7 3 0 0 3 3 2 0 AAA domain KTI12 PF08433.10 CCF72811.1 - 0.018 14.5 0.0 0.032 13.7 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_7 PF12775.7 CCF72811.1 - 0.018 14.5 0.2 0.17 11.4 0.1 2.2 2 0 0 2 2 2 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 CCF72811.1 - 0.019 14.7 0.1 0.035 13.9 0.1 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 CCF72811.1 - 0.031 13.6 0.2 0.065 12.6 0.2 1.5 1 0 0 1 1 1 0 KaiC DNA_pol3_delta2 PF13177.6 CCF72811.1 - 0.038 13.8 0.1 0.12 12.2 0.0 1.8 2 0 0 2 2 2 0 DNA polymerase III, delta subunit PhoH PF02562.16 CCF72811.1 - 0.041 13.3 0.4 0.099 12.1 0.4 1.6 1 0 0 1 1 1 0 PhoH-like protein NTPase_1 PF03266.15 CCF72811.1 - 0.045 13.6 0.5 0.31 10.9 0.1 2.4 2 0 0 2 2 2 0 NTPase TsaE PF02367.17 CCF72811.1 - 0.047 13.7 0.6 0.11 12.4 0.2 1.9 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 CCF72811.1 - 0.06 13.3 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 NACHT domain Parvo_NS1 PF01057.17 CCF72811.1 - 0.077 12.1 0.2 0.15 11.1 0.2 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 DUF815 PF05673.13 CCF72811.1 - 0.12 11.5 0.2 0.41 9.8 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 CCF72811.1 - 0.13 12.4 0.0 0.34 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 CCF72811.1 - 0.14 12.0 0.0 0.38 10.6 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) EMC3_TMCO1 PF01956.16 CCF72812.1 - 1e-14 54.6 0.2 1.6e-14 54.0 0.2 1.2 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like DUF2417 PF10329.9 CCF72812.1 - 0.038 13.4 0.2 0.069 12.6 0.0 1.5 2 0 0 2 2 2 0 Region of unknown function (DUF2417) PCNA_N PF00705.18 CCF72813.1 - 1.3e-43 147.7 0.5 2.6e-43 146.7 0.5 1.4 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 CCF72813.1 - 1.4e-29 102.8 0.0 3.5e-29 101.6 0.0 1.6 1 1 1 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 CCF72813.1 - 0.062 12.7 0.0 0.094 12.2 0.0 1.2 1 0 0 1 1 1 0 Rad9 DNA_pol3_beta PF00712.19 CCF72813.1 - 0.087 13.0 0.4 0.46 10.6 0.1 2.2 2 1 1 3 3 3 0 DNA polymerase III beta subunit, N-terminal domain DNA_pol3_beta_2 PF02767.16 CCF72813.1 - 0.14 12.4 0.0 0.26 11.5 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase III beta subunit, central domain Proteasome PF00227.26 CCF72814.1 - 2.4e-21 76.1 0.0 1.2e-12 47.8 0.0 2.3 1 1 1 2 2 2 2 Proteasome subunit G-7-MTase PF12803.7 CCF72814.1 - 0.14 11.3 0.2 8 5.5 0.1 2.1 2 0 0 2 2 2 0 mRNA (guanine-7-)methyltransferase (G-7-MTase) HOIP-UBA PF16678.5 CCF72814.1 - 0.18 11.8 0.0 0.28 11.2 0.0 1.2 1 0 0 1 1 1 0 HOIP UBA domain pair NAP PF00956.18 CCF72815.1 - 3.5e-61 206.8 10.0 1.9e-59 201.1 10.0 2.1 1 1 0 1 1 1 1 Nucleosome assembly protein (NAP) DUF2508 PF10704.9 CCF72815.1 - 0.00052 20.1 3.3 0.00097 19.3 1.3 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2508) Spc7 PF08317.11 CCF72815.1 - 0.0041 16.0 0.7 0.0041 16.0 0.7 1.7 2 0 0 2 2 2 1 Spc7 kinetochore protein Mst1_SARAH PF11629.8 CCF72815.1 - 0.018 15.1 1.1 0.046 13.8 1.1 1.7 1 0 0 1 1 1 0 C terminal SARAH domain of Mst1 DUF349 PF03993.12 CCF72815.1 - 0.025 14.8 0.0 0.13 12.6 0.0 2.1 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) FCH PF00611.23 CCF72815.1 - 0.026 14.8 0.1 0.082 13.2 0.0 1.9 2 0 0 2 2 2 0 Fes/CIP4, and EFC/F-BAR homology domain PPP1R35_C PF15503.6 CCF72815.1 - 0.46 10.3 4.0 3.5 7.4 0.2 2.2 2 0 0 2 2 2 0 Protein phosphatase 1 regulatory subunit 35 C-terminus FadA PF09403.10 CCF72815.1 - 0.8 10.2 5.2 0.3 11.6 1.3 2.1 2 0 0 2 2 2 0 Adhesion protein FadA PKK PF12474.8 CCF72815.1 - 9.4 6.4 11.6 1.1 9.4 1.5 2.6 3 0 0 3 3 3 0 Polo kinase kinase UQ_con PF00179.26 CCF72816.1 - 8.5e-53 177.8 0.2 9.6e-53 177.6 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 CCF72816.1 - 0.00014 21.5 0.0 0.00019 21.2 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 CCF72816.1 - 0.012 15.5 0.1 0.019 14.8 0.1 1.4 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 CCF72816.1 - 0.037 14.3 0.1 0.04 14.2 0.1 1.3 1 0 0 1 1 1 0 RWD domain Bcl-2 PF00452.19 CCF72817.1 - 0.05 14.3 0.1 0.3 11.8 0.0 2.2 2 0 0 2 2 2 0 Apoptosis regulator proteins, Bcl-2 family DUF726 PF05277.12 CCF72818.1 - 1e-105 353.5 1.0 1e-105 353.5 1.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF726) Cutinase PF01083.22 CCF72818.1 - 0.0019 18.2 0.0 0.0036 17.3 0.0 1.4 1 0 0 1 1 1 1 Cutinase VirJ PF06057.11 CCF72818.1 - 0.0092 15.9 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial virulence protein (VirJ) LCAT PF02450.15 CCF72818.1 - 0.017 14.3 0.2 0.065 12.4 0.0 1.9 2 0 0 2 2 2 0 Lecithin:cholesterol acyltransferase YmgB PF10798.8 CCF72818.1 - 0.039 13.8 1.0 0.12 12.2 1.0 1.8 1 0 0 1 1 1 0 Biofilm development protein YmgB/AriR DUF676 PF05057.14 CCF72818.1 - 0.054 13.0 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Abhydrolase_1 PF00561.20 CCF72818.1 - 0.058 13.0 0.1 0.17 11.5 0.0 1.7 2 0 0 2 2 2 0 alpha/beta hydrolase fold Myb_DNA-bind_7 PF15963.5 CCF72819.1 - 6.8e-22 77.2 0.4 1.2e-21 76.4 0.4 1.4 1 0 0 1 1 1 1 Myb DNA-binding like SHNi-TPR PF10516.9 CCF72820.1 - 2.3e-06 27.0 0.0 8e-06 25.2 0.0 2.0 1 0 0 1 1 1 1 SHNi-TPR TPR_12 PF13424.6 CCF72820.1 - 4.4e-06 26.9 0.2 0.025 14.8 0.1 2.8 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 CCF72820.1 - 4.6e-06 26.3 3.5 0.087 13.0 0.0 3.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 CCF72820.1 - 1.3e-05 24.8 0.2 0.61 10.0 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 CCF72820.1 - 0.013 16.1 0.0 2.2 9.0 0.0 2.7 2 1 0 2 2 2 0 Tetratricopeptide repeat MTH865 PF07747.11 CCF72820.1 - 0.03 14.1 0.0 0.079 12.8 0.0 1.7 1 0 0 1 1 1 0 MTH865-like family TPR_8 PF13181.6 CCF72820.1 - 0.1 12.9 8.3 4.7 7.7 0.0 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 CCF72820.1 - 0.12 12.3 0.0 1.1 9.2 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 CCF72820.1 - 0.16 11.7 0.4 2.1 8.1 0.0 2.7 3 0 0 3 3 3 0 TPR repeat TPR_6 PF13174.6 CCF72820.1 - 0.86 10.4 3.3 1.4e+02 3.4 0.0 4.3 4 1 0 4 4 4 0 Tetratricopeptide repeat CactinC_cactus PF09732.9 CCF72821.1 - 1e-53 180.6 3.0 2.7e-53 179.2 3.0 1.8 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein Cactin_mid PF10312.9 CCF72821.1 - 5.9e-29 101.2 6.7 5.9e-29 101.2 6.7 2.2 2 0 0 2 2 2 1 Conserved mid region of cactin DUF3385 PF11865.8 CCF72821.1 - 0.035 14.0 0.3 0.074 13.0 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3385) TDRP PF15683.5 CCF72821.1 - 0.89 9.5 6.9 1.9 8.5 1.0 3.0 4 0 0 4 4 4 0 Testis development-related protein DUF4389 PF14333.6 CCF72823.1 - 0.0017 18.2 0.1 0.0048 16.8 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4389) dCMP_cyt_deam_1 PF00383.23 CCF72824.1 - 5.1e-12 45.6 0.3 1.1e-11 44.5 0.3 1.6 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 CCF72824.1 - 2.7e-06 27.2 0.2 6.7e-06 25.9 0.2 1.7 1 1 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 CCF72824.1 - 0.047 13.8 0.1 0.087 12.9 0.1 1.4 1 0 0 1 1 1 0 Bd3614-like deaminase FHA PF00498.26 CCF72828.1 - 2e-17 63.3 0.1 2.2e-07 31.1 0.0 2.6 2 0 0 2 2 2 2 FHA domain zf-C3HC4_3 PF13920.6 CCF72828.1 - 5.6e-09 35.7 4.9 1e-08 34.9 4.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 CCF72828.1 - 9.3e-09 35.3 10.9 2e-08 34.2 10.9 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 CCF72828.1 - 2.2e-08 34.0 8.1 7.4e-08 32.3 8.2 1.9 1 1 0 1 1 1 1 RING-type zinc-finger zf-C3HC4 PF00097.25 CCF72828.1 - 6.6e-07 29.1 8.7 1.2e-06 28.2 8.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF72828.1 - 8e-07 28.8 8.9 1.5e-06 27.9 8.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 CCF72828.1 - 1.3e-06 28.7 8.9 2.5e-06 27.7 8.9 1.5 1 0 0 1 1 1 1 Ring finger domain Prok-RING_4 PF14447.6 CCF72828.1 - 1e-05 25.3 7.9 5.1e-05 23.1 8.0 2.2 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 CCF72828.1 - 6.9e-05 22.7 9.7 0.00014 21.7 9.7 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_10 PF16685.5 CCF72828.1 - 0.00074 19.6 2.5 0.0015 18.6 2.5 1.5 1 0 0 1 1 1 1 zinc RING finger of MSL2 U-box PF04564.15 CCF72828.1 - 0.0051 17.0 0.0 0.028 14.6 0.0 2.4 1 0 0 1 1 1 1 U-box domain zf-RING_6 PF14835.6 CCF72828.1 - 0.13 12.1 4.0 0.3 11.0 4.0 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 CCF72828.1 - 0.16 11.7 8.2 0.64 9.9 8.4 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-rbx1 PF12678.7 CCF72828.1 - 0.19 12.0 7.7 0.52 10.6 7.7 1.8 1 1 0 1 1 1 0 RING-H2 zinc finger domain DUF3527 PF12043.8 CCF72828.1 - 0.62 9.6 2.4 0.91 9.0 2.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3527) zf-Nse PF11789.8 CCF72828.1 - 0.77 9.6 4.7 2.4 8.0 4.7 1.9 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Peptidase_M24 PF00557.24 CCF72829.1 - 1.4e-37 129.4 0.0 1.9e-21 76.7 0.0 2.2 2 0 0 2 2 2 2 Metallopeptidase family M24 Rav1p_C PF12234.8 CCF72830.1 - 4.3e-17 61.8 2.2 6.4e-17 61.2 2.2 1.1 1 0 0 1 1 1 1 RAVE protein 1 C terminal NFACT-R_1 PF05670.13 CCF72831.1 - 4.4e-33 114.2 0.2 1.4e-32 112.6 0.0 2.0 2 0 0 2 2 2 1 NFACT protein RNA binding domain FbpA PF05833.11 CCF72831.1 - 2.5e-26 92.5 2.5 6e-24 84.6 0.1 2.4 2 0 0 2 2 2 2 Fibronectin-binding protein A N-terminus (FbpA) NFACT-C PF11923.8 CCF72831.1 - 8.6e-11 41.7 0.0 8.6e-11 41.7 0.0 2.3 3 0 0 3 3 3 1 NFACT protein C-terminal domain Pox_E10 PF04805.12 CCF72831.1 - 1.2 9.1 4.4 0.34 10.8 0.6 2.1 2 0 0 2 2 2 0 E10-like protein conserved region AATF-Che1 PF13339.6 CCF72832.1 - 1.2e-07 32.5 0.6 1.6e-07 32.1 0.6 1.2 1 1 0 1 1 1 1 Apoptosis antagonizing transcription factor Imm41 PF15592.6 CCF72832.1 - 0.037 14.4 0.2 0.058 13.7 0.2 1.4 1 0 0 1 1 1 0 Immunity protein 41 s48_45 PF07422.13 CCF72833.1 - 0.0011 19.5 23.5 0.12 13.0 0.6 4.9 5 0 0 5 5 5 4 Sexual stage antigen s48/45 domain AAA PF00004.29 CCF72834.1 - 7e-14 52.4 0.0 2.5e-13 50.6 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF72834.1 - 8.4e-12 45.5 0.0 1.7e-11 44.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CCF72834.1 - 1.7e-08 35.0 0.1 2.4e-06 28.1 0.1 2.3 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 CCF72834.1 - 2.1e-06 27.8 0.3 7.2e-06 26.1 0.3 1.9 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_19 PF13245.6 CCF72834.1 - 6.9e-05 23.2 0.0 0.00018 21.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CCF72834.1 - 0.0014 18.4 0.0 0.0022 17.7 0.0 1.2 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CCF72834.1 - 0.0091 15.3 0.0 0.015 14.5 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) BAH PF01426.18 CCF72834.1 - 0.0093 15.8 0.4 0.019 14.8 0.4 1.5 1 0 0 1 1 1 1 BAH domain TniB PF05621.11 CCF72834.1 - 0.01 15.3 0.0 0.018 14.5 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein Zeta_toxin PF06414.12 CCF72834.1 - 0.03 13.6 0.0 0.074 12.3 0.0 1.7 1 1 0 1 1 1 0 Zeta toxin AAA_lid_10 PF17872.1 CCF72834.1 - 0.037 14.1 0.0 0.097 12.8 0.0 1.7 1 0 0 1 1 1 0 AAA lid domain MeaB PF03308.16 CCF72834.1 - 0.046 12.7 0.1 0.084 11.8 0.1 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DinI PF06183.13 CCF72835.1 - 0.12 12.7 0.1 0.46 10.9 0.1 1.9 2 0 0 2 2 2 0 DinI-like family Sua5_yciO_yrdC PF01300.18 CCF72836.1 - 6.1e-40 136.6 0.0 1e-39 135.9 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 CCF72836.1 - 4.1e-09 37.1 0.0 7.7e-09 36.2 0.0 1.5 1 1 0 1 1 1 1 Putative GTP-binding controlling metal-binding SL4P PF17618.2 CCF72836.1 - 0.064 13.3 0.0 0.19 11.8 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized Strongylid L4 protein Med6 PF04934.14 CCF72838.1 - 3.4e-14 52.8 0.0 5e-14 52.2 0.0 1.2 1 0 0 1 1 1 1 MED6 mediator sub complex component DEAD PF00270.29 CCF72840.1 - 6.5e-50 169.3 0.0 1.3e-49 168.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72840.1 - 3e-33 114.5 0.3 1.6e-32 112.1 0.1 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72840.1 - 0.022 14.8 0.0 0.048 13.7 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit UTP25 PF06862.12 CCF72840.1 - 0.035 12.9 0.0 0.27 10.0 0.0 2.5 3 0 0 3 3 3 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 PhoLip_ATPase_C PF16212.5 CCF72841.1 - 5.2e-63 213.1 32.3 5.2e-63 213.1 32.3 3.0 3 0 0 3 3 3 1 Phospholipid-translocating P-type ATPase C-terminal PhoLip_ATPase_N PF16209.5 CCF72841.1 - 1.1e-12 47.4 2.9 1.1e-12 47.4 2.9 2.5 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 CCF72841.1 - 3.3e-08 33.2 0.1 1.3e-07 31.3 0.1 2.0 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 CCF72841.1 - 4.6e-08 33.6 0.0 0.0017 18.7 0.0 3.2 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 CCF72841.1 - 0.0051 16.6 2.2 0.023 14.4 2.2 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 CCF72841.1 - 0.0099 15.9 0.1 0.047 13.8 0.0 2.1 2 0 0 2 2 2 1 Cation transport ATPase (P-type) G6B PF15096.6 CCF72841.1 - 0.16 11.7 0.0 0.28 11.0 0.0 1.2 1 0 0 1 1 1 0 G6B family Clathrin PF00637.20 CCF72842.1 - 1.7e-67 225.7 44.3 1.5e-17 63.8 1.7 9.2 7 1 2 9 9 9 7 Region in Clathrin and VPS Clathrin_H_link PF13838.6 CCF72842.1 - 7.2e-19 67.5 2.4 3e-17 62.3 0.1 3.7 4 1 1 5 5 4 1 Clathrin-H-link TPR_7 PF13176.6 CCF72842.1 - 0.00021 21.1 0.5 0.26 11.4 0.0 4.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 CCF72842.1 - 0.0034 17.1 0.3 0.036 13.9 0.1 3.0 2 0 0 2 2 2 1 Tetratricopeptide repeat Clathrin_propel PF01394.20 CCF72842.1 - 0.0064 16.8 0.1 0.48 10.8 0.0 3.4 3 0 0 3 3 3 1 Clathrin propeller repeat TPR_2 PF07719.17 CCF72842.1 - 0.0094 16.0 1.8 0.23 11.6 0.1 4.1 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_8 PF13181.6 CCF72842.1 - 0.057 13.6 0.4 6.6 7.2 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat Imm30 PF15565.6 CCF72842.1 - 0.079 13.0 0.5 0.59 10.3 0.0 2.7 3 0 0 3 3 3 0 Immunity protein 30 Pesticin PF16754.5 CCF72842.1 - 0.11 12.5 0.1 0.35 10.8 0.1 1.8 1 0 0 1 1 1 0 Bacterial toxin homologue of phage lysozyme, C-term ANAPC3 PF12895.7 CCF72842.1 - 1.2 9.4 7.1 2.7 8.3 0.1 3.9 5 0 0 5 5 4 0 Anaphase-promoting complex, cyclosome, subunit 3 Tfb5 PF06331.12 CCF72842.1 - 1.7 8.7 4.7 25 4.9 0.3 2.8 2 0 0 2 2 2 0 Transcription factor TFIIH complex subunit Tfb5 Ssl1 PF04056.14 CCF72843.1 - 8.6e-56 188.8 0.0 1.3e-55 188.2 0.0 1.2 1 0 0 1 1 1 1 Ssl1-like VWA_2 PF13519.6 CCF72843.1 - 6.8e-12 46.0 0.0 1.1e-11 45.3 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA PF00092.28 CCF72843.1 - 8.9e-06 26.1 0.0 1.2e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain Tfb4 PF03850.14 CCF72843.1 - 1.7e-05 24.5 6.4 4.2e-05 23.2 5.9 1.9 1 1 1 2 2 2 1 Transcription factor Tfb4 C1_4 PF07975.12 CCF72843.1 - 8.9e-05 22.7 13.0 8.9e-05 22.7 13.0 3.1 3 1 0 3 3 3 1 TFIIH C1-like domain Cob_adeno_trans PF01923.18 CCF72844.1 - 0.05 13.7 0.6 0.093 12.9 0.6 1.6 1 0 0 1 1 1 0 Cobalamin adenosyltransferase FAM76 PF16046.5 CCF72844.1 - 0.27 10.6 4.6 0.39 10.0 4.6 1.2 1 0 0 1 1 1 0 FAM76 protein DUF445 PF04286.12 CCF72846.1 - 0.49 10.2 5.1 0.38 10.5 2.5 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF445) Ribosomal_L34e PF01199.18 CCF72849.1 - 3.9e-35 120.0 6.6 3.9e-35 120.0 6.6 1.4 2 0 0 2 2 2 1 Ribosomal protein L34e ATP-synt_F6 PF05511.11 CCF72849.1 - 0.043 14.2 1.7 0.099 13.1 0.1 2.2 2 1 0 2 2 2 0 Mitochondrial ATP synthase coupling factor 6 DUF1977 PF09320.11 CCF72849.1 - 0.049 13.9 0.9 0.072 13.4 0.9 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1977) DUF853 PF05872.12 CCF72849.1 - 0.096 11.3 0.1 1 7.9 0.0 1.9 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF853) tRNA-synt_2 PF00152.20 CCF72850.1 - 8.5e-79 264.9 0.1 1.1e-78 264.6 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CCF72850.1 - 2.5e-06 27.4 0.1 4.6e-06 26.5 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CCF72850.1 - 0.00083 18.9 0.1 0.2 11.1 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.25 CCF72850.1 - 0.13 12.2 0.2 0.49 10.3 0.2 2.0 1 1 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) AAA PF00004.29 CCF72851.1 - 1.2e-91 304.0 0.0 4e-45 153.5 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF72851.1 - 4.9e-27 93.5 1.2 1.1e-12 47.6 0.0 3.0 2 1 0 2 2 2 2 AAA+ lid domain RuvB_N PF05496.12 CCF72851.1 - 1e-14 54.6 0.0 1.5e-06 28.0 0.0 2.6 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CCF72851.1 - 1.3e-12 48.5 0.1 0.00016 22.1 0.0 3.8 2 2 0 2 2 2 2 AAA ATPase domain AAA_33 PF13671.6 CCF72851.1 - 2.3e-10 40.8 0.0 0.00011 22.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_2 PF07724.14 CCF72851.1 - 3.4e-09 37.0 0.0 0.0013 18.9 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_14 PF13173.6 CCF72851.1 - 5.3e-09 36.2 0.0 0.00074 19.6 0.0 3.1 3 0 0 3 3 3 2 AAA domain AAA_5 PF07728.14 CCF72851.1 - 1.1e-08 35.1 0.2 0.011 15.8 0.0 3.3 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 CCF72851.1 - 1.3e-08 34.4 0.1 0.0017 17.7 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain Vps4_C PF09336.10 CCF72851.1 - 1.4e-07 31.4 0.1 0.0001 22.2 0.0 2.9 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_22 PF13401.6 CCF72851.1 - 2.1e-07 31.3 1.0 0.11 12.7 0.0 4.0 2 2 2 4 4 4 2 AAA domain Viral_helicase1 PF01443.18 CCF72851.1 - 5.7e-07 29.5 0.0 0.0051 16.6 0.0 2.3 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase AAA_18 PF13238.6 CCF72851.1 - 6.8e-07 29.9 0.0 0.039 14.5 0.0 2.7 2 0 0 2 2 2 2 AAA domain CDC48_N PF02359.18 CCF72851.1 - 1e-06 28.8 0.8 3.1e-06 27.3 0.8 1.8 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain DUF815 PF05673.13 CCF72851.1 - 3.4e-06 26.4 0.0 0.0088 15.2 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) IstB_IS21 PF01695.17 CCF72851.1 - 6e-06 26.1 0.1 0.025 14.3 0.0 2.3 2 0 0 2 2 2 2 IstB-like ATP binding protein TsaE PF02367.17 CCF72851.1 - 9.7e-06 25.6 0.0 0.038 14.0 0.0 2.3 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 CCF72851.1 - 9.8e-06 25.1 0.6 0.039 13.3 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 CCF72851.1 - 9.9e-06 25.9 0.0 0.035 14.5 0.0 2.9 2 0 0 2 2 2 2 RNA helicase NACHT PF05729.12 CCF72851.1 - 1.6e-05 24.9 1.8 0.11 12.4 0.0 3.4 3 0 0 3 3 3 1 NACHT domain ABC_tran PF00005.27 CCF72851.1 - 1.7e-05 25.3 0.0 0.11 13.0 0.0 3.3 2 1 0 2 2 2 1 ABC transporter AAA_28 PF13521.6 CCF72851.1 - 4e-05 23.9 0.0 0.16 12.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 CCF72851.1 - 5.9e-05 22.8 0.1 0.7 9.6 0.0 3.2 2 1 0 2 2 2 2 Sigma-54 interaction domain Parvo_NS1 PF01057.17 CCF72851.1 - 8.6e-05 21.7 0.2 0.042 12.9 0.0 2.2 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AAA_7 PF12775.7 CCF72851.1 - 0.00015 21.4 0.0 0.41 10.2 0.0 3.1 2 1 0 2 2 2 2 P-loop containing dynein motor region Zeta_toxin PF06414.12 CCF72851.1 - 0.0002 20.7 0.1 0.41 9.9 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin AAA_3 PF07726.11 CCF72851.1 - 0.0002 21.3 0.0 0.23 11.3 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 CCF72851.1 - 0.00034 20.0 1.3 2.8 7.2 0.1 3.3 2 1 0 3 3 3 1 KaiC NB-ARC PF00931.22 CCF72851.1 - 0.00039 19.7 0.0 0.47 9.6 0.0 2.8 3 0 0 3 3 3 2 NB-ARC domain DUF2075 PF09848.9 CCF72851.1 - 0.00048 19.5 0.0 0.23 10.7 0.0 2.4 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_17 PF13207.6 CCF72851.1 - 0.00051 20.5 0.0 1.2 9.6 0.0 3.0 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 CCF72851.1 - 0.00073 19.5 0.3 0.96 9.3 0.0 2.9 2 1 1 3 3 3 1 ATPase domain predominantly from Archaea Sigma54_activ_2 PF14532.6 CCF72851.1 - 0.002 18.3 0.0 1.6 8.9 0.0 2.7 3 0 0 3 3 2 1 Sigma-54 interaction domain AAA_25 PF13481.6 CCF72851.1 - 0.002 17.7 1.0 1.1 8.8 0.0 3.3 2 1 1 3 3 3 1 AAA domain Cytidylate_kin2 PF13189.6 CCF72851.1 - 0.0025 18.0 0.0 2.3 8.3 0.0 2.9 3 0 0 3 3 2 1 Cytidylate kinase-like family AAA_19 PF13245.6 CCF72851.1 - 0.0027 18.0 0.4 5.1 7.4 0.1 3.2 4 0 0 4 4 3 0 AAA domain AAA_24 PF13479.6 CCF72851.1 - 0.0045 16.7 0.1 3.8 7.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 CCF72851.1 - 0.0056 16.2 0.5 2 7.8 0.0 2.3 2 0 0 2 2 2 1 PhoH-like protein Rad17 PF03215.15 CCF72851.1 - 0.011 15.7 0.0 2.4 8.0 0.0 2.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_30 PF13604.6 CCF72851.1 - 0.011 15.4 0.0 2.5 7.8 0.0 2.6 2 0 0 2 2 2 0 AAA domain ResIII PF04851.15 CCF72851.1 - 0.014 15.4 0.0 8.8 6.3 0.0 2.8 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_11 PF13086.6 CCF72851.1 - 0.025 14.4 0.0 2.9 7.6 0.0 2.5 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 CCF72851.1 - 0.033 14.1 0.8 7.2 6.5 0.0 4.1 3 1 0 4 4 4 0 NTPase SKI PF01202.22 CCF72851.1 - 0.053 13.6 0.0 13 5.9 0.0 2.5 2 0 0 2 2 2 0 Shikimate kinase CDC48_2 PF02933.17 CCF72851.1 - 0.062 13.1 0.0 0.17 11.7 0.0 1.7 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), domain 2 Torsin PF06309.11 CCF72851.1 - 0.069 13.3 0.0 2.2 8.4 0.0 2.6 2 0 0 2 2 2 0 Torsin Bac_DnaA PF00308.18 CCF72851.1 - 0.082 12.7 0.2 2.2 8.0 0.0 2.8 3 0 0 3 3 3 0 Bacterial dnaA protein Molydop_binding PF01568.21 CCF72851.1 - 0.18 11.9 0.0 0.36 10.9 0.0 1.4 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Hydin_ADK PF17213.3 CCF72851.1 - 0.3 11.3 1.3 20 5.4 0.0 3.2 3 0 0 3 3 3 0 Hydin Adenylate kinase-like domain DNA_mis_repair PF01119.19 CCF72852.1 - 9.5e-21 73.7 0.0 1.8e-20 72.8 0.0 1.5 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 CCF72852.1 - 4.2e-17 62.3 0.0 2.5e-16 59.8 0.0 2.2 1 1 0 1 1 1 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 CCF72852.1 - 4.4e-11 42.7 0.1 1.3e-10 41.3 0.1 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 CCF72852.1 - 1.1e-05 26.0 0.4 2.8e-05 24.6 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4131 PF13567.6 CCF72854.1 - 0.03 14.0 0.3 0.03 14.0 0.3 2.7 2 2 1 3 3 3 0 Domain of unknown function (DUF4131) ELFV_dehydrog PF00208.21 CCF72856.1 - 8.1e-42 143.6 0.0 1.6e-41 142.7 0.0 1.5 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Bac_GDH PF05088.12 CCF72856.1 - 1.3e-14 52.8 0.0 1.6e-09 35.9 0.0 2.2 2 0 0 2 2 2 2 Bacterial NAD-glutamate dehydrogenase ELFV_dehydrog_N PF02812.18 CCF72856.1 - 0.0071 16.2 0.0 0.038 13.9 0.0 2.2 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Amidohydro_2 PF04909.14 CCF72857.1 - 0.013 15.3 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Amidohydrolase Peptidase_C48 PF02902.19 CCF72859.1 - 1.2e-26 93.9 7.1 1.8e-25 90.0 5.7 2.9 2 1 0 2 2 2 1 Ulp1 protease family, C-terminal catalytic domain PMI_typeI PF01238.21 CCF72860.1 - 4.8e-57 193.8 0.0 6e-57 193.5 0.0 1.1 1 0 0 1 1 1 1 Phosphomannose isomerase type I AraC_binding PF02311.19 CCF72860.1 - 0.044 13.7 0.0 0.26 11.2 0.0 2.3 2 0 0 2 2 2 0 AraC-like ligand binding domain Pkinase PF00069.25 CCF72861.1 - 4e-29 101.8 0.0 6.8e-29 101.0 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF72861.1 - 1.1e-07 31.5 0.0 7.4e-07 28.7 0.0 2.0 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF72861.1 - 0.024 13.9 0.0 0.22 10.8 0.0 2.2 2 1 0 2 2 2 0 Kinase-like Pro_isomerase PF00160.21 CCF72862.1 - 5e-46 156.8 0.4 7.5e-46 156.3 0.4 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NTF2 PF02136.20 CCF72863.1 - 1.8e-21 76.9 0.0 2e-21 76.8 0.0 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain DUF1749 PF08538.10 CCF72864.1 - 3.8e-25 88.6 0.0 5.2e-25 88.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1749) Abhydrolase_6 PF12697.7 CCF72864.1 - 8.6e-08 33.1 0.0 1.1e-07 32.8 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 CCF72864.1 - 1.3e-06 28.2 0.0 1.7e-06 27.9 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CCF72864.1 - 0.0023 17.2 0.0 0.0033 16.7 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 LIDHydrolase PF10230.9 CCF72864.1 - 0.0037 16.9 0.0 0.0048 16.5 0.0 1.2 1 0 0 1 1 1 1 Lipid-droplet associated hydrolase Thioesterase PF00975.20 CCF72864.1 - 0.0056 16.8 0.0 0.0081 16.3 0.0 1.2 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_3 PF07859.13 CCF72864.1 - 0.0077 16.1 0.0 0.0094 15.8 0.0 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Ndr PF03096.14 CCF72864.1 - 0.0078 14.9 0.0 0.011 14.4 0.0 1.1 1 0 0 1 1 1 1 Ndr family Chlorophyllase2 PF12740.7 CCF72864.1 - 0.013 14.5 0.0 0.017 14.0 0.0 1.2 1 0 0 1 1 1 0 Chlorophyllase enzyme Ser_hydrolase PF06821.13 CCF72864.1 - 0.02 14.7 0.0 0.031 14.1 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase TusA PF01206.17 CCF72864.1 - 0.063 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Sulfurtransferase TusA Lipase_3 PF01764.25 CCF72864.1 - 0.19 11.6 0.2 0.28 11.0 0.2 1.3 1 0 0 1 1 1 0 Lipase (class 3) MT-A70 PF05063.14 CCF72865.1 - 0.015 15.3 0.5 0.029 14.3 0.5 1.4 1 0 0 1 1 1 0 MT-A70 PBECR5 PF18814.1 CCF72866.1 - 0.014 15.3 0.6 0.028 14.3 0.6 1.5 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5 PIP5K PF01504.18 CCF72867.1 - 3.1e-31 108.6 2.0 1.3e-22 80.3 0.9 2.7 1 1 1 2 2 2 2 Phosphatidylinositol-4-phosphate 5-Kinase Cpn60_TCP1 PF00118.24 CCF72867.1 - 2.1e-06 26.7 0.0 3.5e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family NMT PF01233.19 CCF72868.1 - 8.8e-71 236.9 0.0 1.8e-70 235.9 0.0 1.5 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain NMT_C PF02799.15 CCF72868.1 - 4e-68 229.1 1.1 6.1e-68 228.5 1.1 1.3 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Acetyltransf_9 PF13527.7 CCF72868.1 - 6.3e-05 23.1 0.0 0.0013 18.9 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CCF72868.1 - 0.001 19.3 0.0 0.0022 18.2 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CCF72868.1 - 0.18 12.3 0.0 0.39 11.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA PF00004.29 CCF72869.1 - 3.5e-74 247.5 0.0 6.5e-46 156.0 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF72869.1 - 2.7e-12 46.3 0.2 9.8e-10 38.1 0.0 2.5 2 0 0 2 2 2 1 AAA+ lid domain AAA_5 PF07728.14 CCF72869.1 - 3.3e-11 43.4 0.1 0.00014 21.9 0.0 4.0 3 1 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 CCF72869.1 - 3.7e-10 40.2 0.0 6.2e-05 23.2 0.0 3.3 3 0 0 3 3 3 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 CCF72869.1 - 3.5e-09 37.3 0.0 0.0071 16.7 0.0 4.0 3 2 0 3 3 2 2 AAA ATPase domain AAA_22 PF13401.6 CCF72869.1 - 2.7e-07 30.9 0.1 0.007 16.6 0.0 3.9 2 2 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 CCF72869.1 - 4.8e-06 26.1 0.0 0.1 12.0 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 CCF72869.1 - 5.5e-06 26.2 0.0 0.0057 16.4 0.0 3.3 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 CCF72869.1 - 1.2e-05 24.9 0.1 0.47 9.9 0.0 3.9 5 0 0 5 5 5 2 P-loop containing dynein motor region AAA_14 PF13173.6 CCF72869.1 - 2.4e-05 24.4 0.0 0.22 11.6 0.0 3.5 4 0 0 4 4 3 2 AAA domain RNA_helicase PF00910.22 CCF72869.1 - 6.9e-05 23.2 0.0 0.41 11.1 0.1 3.0 2 1 0 2 2 2 2 RNA helicase IstB_IS21 PF01695.17 CCF72869.1 - 0.00022 21.0 0.0 0.27 10.9 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein TIP49 PF06068.13 CCF72869.1 - 0.00045 19.5 0.0 0.028 13.6 0.0 2.3 2 0 0 2 2 2 1 TIP49 P-loop domain Rad17 PF03215.15 CCF72869.1 - 0.00072 19.5 0.0 1.9 8.3 0.0 2.8 2 0 0 2 2 2 2 Rad17 P-loop domain Sigma54_activat PF00158.26 CCF72869.1 - 0.00087 19.0 0.0 0.84 9.3 0.0 3.4 3 0 0 3 3 3 1 Sigma-54 interaction domain AAA_33 PF13671.6 CCF72869.1 - 0.0013 18.9 0.0 2.4 8.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain Viral_helicase1 PF01443.18 CCF72869.1 - 0.0023 17.7 0.0 0.2 11.4 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 CCF72869.1 - 0.0026 17.3 0.1 1.3 8.5 0.0 2.6 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 CCF72869.1 - 0.0031 17.4 0.0 5.8 6.8 0.0 3.9 4 0 0 4 4 4 0 NACHT domain NB-ARC PF00931.22 CCF72869.1 - 0.0036 16.5 0.0 11 5.2 0.0 3.5 4 0 0 4 4 4 0 NB-ARC domain ATPase PF06745.13 CCF72869.1 - 0.0041 16.5 0.0 5.5 6.3 0.0 3.7 4 0 0 4 4 4 0 KaiC Sigma54_activ_2 PF14532.6 CCF72869.1 - 0.01 16.0 0.0 7.6 6.7 0.0 3.2 3 0 0 3 3 3 0 Sigma-54 interaction domain AFG1_ATPase PF03969.16 CCF72869.1 - 0.016 14.1 0.0 0.7 8.7 0.0 2.2 2 0 0 2 2 2 0 AFG1-like ATPase DUF815 PF05673.13 CCF72869.1 - 0.018 14.2 0.0 0.3 10.2 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) MCM PF00493.23 CCF72869.1 - 0.019 14.1 0.0 3.2 6.8 0.0 2.4 2 0 0 2 2 2 0 MCM P-loop domain ABC_tran PF00005.27 CCF72869.1 - 0.026 15.1 0.0 0.86 10.1 0.0 2.5 2 0 0 2 2 2 0 ABC transporter AAA_11 PF13086.6 CCF72869.1 - 0.026 14.3 0.0 4.7 6.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 CCF72869.1 - 0.029 14.1 0.1 0.95 9.1 0.0 2.5 2 1 0 2 2 2 0 AAA domain ATPase_2 PF01637.18 CCF72869.1 - 0.033 14.1 0.7 33 4.3 0.0 4.2 2 2 2 4 4 4 0 ATPase domain predominantly from Archaea AAA_18 PF13238.6 CCF72869.1 - 0.045 14.3 0.0 18 5.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 CCF72869.1 - 0.057 12.7 0.0 8 5.7 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin TniB PF05621.11 CCF72869.1 - 0.13 11.7 0.3 6 6.2 0.0 3.4 4 0 0 4 4 4 0 Bacterial TniB protein AAA_30 PF13604.6 CCF72869.1 - 0.2 11.4 0.0 5.1 6.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain Actin PF00022.19 CCF72870.1 - 9.8e-81 271.4 0.0 1.8e-80 270.5 0.0 1.4 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 CCF72870.1 - 0.0011 17.9 0.0 0.74 8.6 0.0 2.2 2 0 0 2 2 2 2 MreB/Mbl protein DS PF01916.17 CCF72871.1 - 1.9e-121 404.8 0.0 2.2e-121 404.6 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase CS PF04969.16 CCF72872.1 - 0.00028 21.8 0.0 0.0007 20.6 0.0 1.7 1 0 0 1 1 1 1 CS domain Pyrophosphatase PF00719.19 CCF72873.1 - 4.2e-39 133.9 1.8 5.6e-39 133.5 1.8 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase zf-C2H2_3 PF13878.6 CCF72874.1 - 0.11 12.3 0.2 0.26 11.1 0.2 1.6 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO Nuf2 PF03800.14 CCF72875.1 - 1.3e-12 48.0 0.0 4.7e-12 46.2 0.0 2.0 1 0 0 1 1 1 1 Nuf2 family Filament PF00038.21 CCF72875.1 - 0.00024 20.8 25.8 0.0031 17.1 10.3 2.6 1 1 2 3 3 3 3 Intermediate filament protein DUF3450 PF11932.8 CCF72875.1 - 0.0024 17.2 4.7 0.0024 17.2 4.7 3.2 1 1 2 3 3 3 1 Protein of unknown function (DUF3450) Spc7 PF08317.11 CCF72875.1 - 0.26 10.1 28.4 0.081 11.8 11.9 2.4 1 1 1 2 2 2 0 Spc7 kinetochore protein T3SSipB PF16535.5 CCF72875.1 - 0.27 11.7 8.6 0.071 13.6 0.6 2.6 1 1 2 3 3 3 0 Type III cell invasion protein SipB GvpG PF05120.12 CCF72875.1 - 0.34 11.0 4.1 0.21 11.6 0.8 2.4 2 0 0 2 2 2 0 Gas vesicle protein G YbaJ PF10757.9 CCF72875.1 - 0.61 10.6 6.9 0.71 10.4 1.2 3.0 2 1 1 3 3 3 0 Biofilm formation regulator YbaJ Prefoldin_2 PF01920.20 CCF72875.1 - 0.62 10.1 26.8 2.2 8.3 7.0 3.9 3 2 0 3 3 3 0 Prefoldin subunit DUF1664 PF07889.12 CCF72875.1 - 2.1 8.4 20.6 3 7.9 0.6 4.2 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) DASH_Duo1 PF08651.10 CCF72875.1 - 2.2 8.1 11.0 2.4 8.0 0.6 4.1 3 1 0 4 4 4 0 DASH complex subunit Duo1 DUF1359 PF07097.11 CCF72875.1 - 3 8.1 13.9 0.13 12.5 1.0 3.6 1 1 1 3 3 3 0 Protein of unknown function (DUF1359) Ribosomal_S8 PF00410.19 CCF72876.1 - 5.8e-19 68.3 0.0 9.8e-19 67.6 0.0 1.4 1 1 0 1 1 1 1 Ribosomal protein S8 PI3K_p85B PF02192.16 CCF72877.1 - 0.028 14.2 1.0 2.8 7.7 0.1 2.2 1 1 1 2 2 2 0 PI3-kinase family, p85-binding domain TB2_DP1_HVA22 PF03134.19 CCF72878.1 - 9.3e-12 44.7 8.3 9.3e-12 44.7 8.3 1.9 1 1 1 2 2 2 1 TB2/DP1, HVA22 family UL41A PF17591.2 CCF72878.1 - 0.026 14.6 0.1 0.045 13.9 0.1 1.5 1 0 0 1 1 1 0 Herpesvirus UL41A RRM_1 PF00076.22 CCF72879.1 - 1.1e-12 47.6 0.0 1.6e-12 47.0 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 CCF72879.1 - 0.0076 16.3 0.0 0.015 15.3 0.0 1.5 2 0 0 2 2 2 1 RNA binding motif HAUS6_N PF14661.6 CCF72880.1 - 0.015 14.9 0.9 0.022 14.4 0.9 1.3 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus FYVE PF01363.21 CCF72880.1 - 0.017 15.2 15.1 0.017 15.2 15.1 2.1 2 1 0 2 2 2 0 FYVE zinc finger Rootletin PF15035.6 CCF72880.1 - 0.17 11.9 6.6 1.2 9.1 0.1 3.2 3 1 0 3 3 3 0 Ciliary rootlet component, centrosome cohesion Ly49 PF08391.10 CCF72880.1 - 0.76 10.1 7.4 0.11 12.9 1.0 2.5 1 1 1 3 3 3 0 Ly49-like protein, N-terminal region bZIP_1 PF00170.21 CCF72880.1 - 1.7 8.8 9.2 0.74 10.0 1.7 3.0 3 1 0 3 3 3 0 bZIP transcription factor ATG16 PF08614.11 CCF72881.1 - 3.5e-07 30.6 36.6 0.00011 22.4 17.2 2.4 1 1 1 2 2 2 2 Autophagy protein 16 (ATG16) APG6_N PF17675.1 CCF72881.1 - 0.00038 21.0 13.7 0.00038 21.0 13.7 4.3 1 1 1 3 3 3 1 Apg6 coiled-coil region Nsp1_C PF05064.13 CCF72881.1 - 0.0005 19.9 6.6 0.0005 19.9 6.6 5.6 3 2 2 5 5 5 1 Nsp1-like C-terminal region EzrA PF06160.12 CCF72881.1 - 0.015 13.5 41.2 0.03 12.5 41.2 1.4 1 0 0 1 1 1 0 Septation ring formation regulator, EzrA KELK PF15796.5 CCF72881.1 - 0.017 15.5 6.5 0.017 15.5 6.5 4.1 2 2 1 3 3 1 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF3584 PF12128.8 CCF72881.1 - 0.018 12.6 36.1 0.029 11.9 36.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DUF1664 PF07889.12 CCF72881.1 - 0.041 13.9 29.7 0.33 11.0 4.6 4.3 1 1 3 4 4 4 0 Protein of unknown function (DUF1664) HAUS-augmin3 PF14932.6 CCF72881.1 - 0.18 11.3 47.5 0.14 11.8 16.7 3.2 2 1 0 3 3 3 0 HAUS augmin-like complex subunit 3 DHR10 PF18595.1 CCF72881.1 - 0.33 11.0 56.2 0.19 11.8 7.2 5.1 3 2 2 5 5 5 0 Designed helical repeat protein 10 domain BLOC1_2 PF10046.9 CCF72881.1 - 0.48 10.7 36.3 0.26 11.6 5.7 4.9 4 0 0 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Bacillus_HBL PF05791.11 CCF72881.1 - 0.53 10.1 24.9 0.17 11.7 3.6 4.4 2 1 2 4 4 4 0 Bacillus haemolytic enterotoxin (HBL) KASH_CCD PF14662.6 CCF72881.1 - 0.68 9.7 54.5 0.34 10.7 24.9 3.1 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH ERM PF00769.19 CCF72881.1 - 0.7 9.7 50.7 4 7.2 21.3 2.3 1 1 1 2 2 2 0 Ezrin/radixin/moesin family MscS_porin PF12795.7 CCF72881.1 - 2 7.9 41.8 0.093 12.3 20.5 2.5 2 1 0 2 2 2 0 Mechanosensitive ion channel porin domain KxDL PF10241.9 CCF72881.1 - 4 7.8 40.4 0.42 10.9 8.5 4.9 3 2 1 4 4 4 0 Uncharacterized conserved protein PEP-utilisers_N PF05524.13 CCF72881.1 - 5.2 7.3 11.7 5.1 7.3 3.5 3.4 2 1 0 2 2 2 0 PEP-utilising enzyme, N-terminal DUF3450 PF11932.8 CCF72881.1 - 8.4 5.6 34.8 1.6 8.0 10.0 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF3450) Kelch_1 PF01344.25 CCF72882.1 - 1.5e-39 133.3 15.4 5.4e-07 29.1 0.6 6.5 6 0 0 6 6 6 6 Kelch motif Kelch_4 PF13418.6 CCF72882.1 - 2e-31 107.7 4.9 3.2e-06 27.0 0.0 6.4 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_3 PF13415.6 CCF72882.1 - 6.6e-31 106.0 5.2 2.7e-06 27.5 0.0 7.3 7 0 0 7 7 7 5 Galactose oxidase, central domain Kelch_5 PF13854.6 CCF72882.1 - 1.2e-27 95.4 8.7 8.3e-06 25.7 0.2 6.4 6 0 0 6 6 6 6 Kelch motif Kelch_6 PF13964.6 CCF72882.1 - 9.9e-27 92.3 11.2 5e-05 23.4 0.0 6.3 6 0 0 6 6 6 5 Kelch motif Kelch_2 PF07646.15 CCF72882.1 - 1.4e-22 78.7 15.1 6.1e-06 26.0 0.0 6.0 7 0 0 7 7 7 5 Kelch motif BTB PF00651.31 CCF72882.1 - 2e-17 63.4 1.1 9.3e-16 58.0 0.1 2.4 1 1 1 2 2 2 1 BTB/POZ domain Hira PF07569.11 CCF72882.1 - 0.0069 16.1 0.6 0.2 11.4 0.0 2.8 3 0 0 3 3 3 1 TUP1-like enhancer of split BACK PF07707.15 CCF72882.1 - 0.0091 16.1 0.6 0.03 14.4 0.1 2.1 2 0 0 2 2 2 1 BTB And C-terminal Kelch PEPcase PF00311.17 CCF72883.1 - 4.6e-226 752.6 0.0 5.5e-226 752.4 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase PEPcase_2 PF14010.6 CCF72883.1 - 0.0088 14.6 0.0 0.025 13.1 0.0 1.8 1 1 0 1 1 1 1 Phosphoenolpyruvate carboxylase ERM PF00769.19 CCF72884.1 - 0.0022 17.9 7.0 0.21 11.4 0.2 2.3 2 0 0 2 2 2 2 Ezrin/radixin/moesin family LPP PF04728.13 CCF72884.1 - 0.069 13.6 8.6 0.27 11.6 1.3 3.8 3 0 0 3 3 3 0 Lipoprotein leucine-zipper APG6_N PF17675.1 CCF72884.1 - 0.18 12.3 13.2 1.1 9.8 2.6 3.0 3 0 0 3 3 3 0 Apg6 coiled-coil region DUF5082 PF16888.5 CCF72884.1 - 0.35 11.1 15.9 5.6 7.3 0.5 4.2 2 2 2 4 4 4 0 Domain of unknown function (DUF5082) DUF1192 PF06698.11 CCF72884.1 - 0.5 10.4 3.4 2 8.5 0.0 3.4 4 0 0 4 4 3 0 Protein of unknown function (DUF1192) CENP-F_leu_zip PF10473.9 CCF72884.1 - 0.55 10.3 16.6 2.4 8.2 0.8 3.0 3 0 0 3 3 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Fez1 PF06818.15 CCF72884.1 - 0.92 9.9 10.8 1.4 9.3 4.3 2.7 2 0 0 2 2 2 0 Fez1 DUF3450 PF11932.8 CCF72884.1 - 1 8.6 10.4 11 5.2 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) ATG16 PF08614.11 CCF72884.1 - 1.4 9.1 18.0 0.17 12.1 5.4 3.1 3 0 0 3 3 3 0 Autophagy protein 16 (ATG16) DUF4200 PF13863.6 CCF72884.1 - 1.5 9.2 21.9 0.15 12.5 2.2 3.2 3 1 0 3 3 2 0 Domain of unknown function (DUF4200) DUF4407 PF14362.6 CCF72884.1 - 2.3 7.5 7.1 2.8 7.2 1.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) ABC_tran_CTD PF16326.5 CCF72884.1 - 3.7 7.9 10.4 7.5 6.9 3.1 3.5 2 1 1 3 3 3 0 ABC transporter C-terminal domain PspA_IM30 PF04012.12 CCF72884.1 - 4.3 6.8 10.0 2.4 7.7 0.9 3.0 2 1 1 3 3 3 0 PspA/IM30 family Spc24 PF08286.11 CCF72884.1 - 4.9 7.4 15.7 1.6 9.0 0.1 4.1 3 1 0 3 3 2 0 Spc24 subunit of Ndc80 Prefoldin_2 PF01920.20 CCF72884.1 - 7 6.7 16.2 4.6 7.2 1.8 3.8 2 1 1 3 3 3 0 Prefoldin subunit DUF724 PF05266.14 CCF72884.1 - 8.2 6.2 10.8 20 5.0 0.8 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF724) DUF919 PF06034.11 CCF72884.1 - 8.4 6.3 7.9 3.5 7.5 1.0 3.9 4 0 0 4 4 4 0 Nucleopolyhedrovirus protein of unknown function (DUF919) CENP-H PF05837.12 CCF72884.1 - 8.5 6.8 12.7 19 5.7 5.8 2.8 2 0 0 2 2 2 0 Centromere protein H (CENP-H) GNAT_C PF18164.1 CCF72885.1 - 0.01 15.6 0.2 0.023 14.4 0.2 1.6 1 0 0 1 1 1 0 GNAT-like C-terminal domain PNISR PF15996.5 CCF72885.1 - 0.58 10.4 4.8 1.4 9.2 4.8 1.6 1 1 0 1 1 1 0 Arginine/serine-rich protein PNISR TSNAXIP1_N PF15739.5 CCF72886.1 - 0.29 11.5 3.7 0.99 9.8 0.1 3.0 3 0 0 3 3 3 0 Translin-associated factor X-interacting N-terminus LPP PF04728.13 CCF72886.1 - 0.75 10.2 8.0 2.7 8.5 0.3 3.9 3 0 0 3 3 3 0 Lipoprotein leucine-zipper Ribosomal_L16 PF00252.18 CCF72887.1 - 1.3e-43 148.1 0.2 1.7e-43 147.8 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e NAC PF01849.18 CCF72888.1 - 2.2e-22 78.8 0.4 3.8e-22 78.0 0.4 1.4 1 0 0 1 1 1 1 NAC domain Ribosomal_L21e PF01157.18 CCF72889.1 - 2.2e-38 130.2 2.6 2.9e-38 129.8 2.6 1.2 1 0 0 1 1 1 1 Ribosomal protein L21e RNA_replicase_B PF03431.13 CCF72889.1 - 0.09 11.2 0.0 0.1 11.0 0.0 1.1 1 0 0 1 1 1 0 RNA replicase, beta-chain PBP_sp32 PF07222.12 CCF72889.1 - 0.11 11.9 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Methyltransf_25 PF13649.6 CCF72890.1 - 2.1e-10 41.2 0.0 7.8e-10 39.3 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 CCF72890.1 - 2.5e-08 33.7 0.0 3.7e-08 33.1 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_11 PF08241.12 CCF72890.1 - 1.3e-07 32.2 0.0 3.1e-07 30.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF72890.1 - 6.4e-07 29.3 0.0 1.3e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CCF72890.1 - 1.6e-06 27.8 0.1 2.6e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 CCF72890.1 - 2.1e-05 24.4 0.0 3.3e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF72890.1 - 2.8e-05 24.8 0.0 5.3e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 CCF72890.1 - 3.2e-05 23.4 0.1 5e-05 22.8 0.1 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB PRMT5 PF05185.16 CCF72890.1 - 0.00013 21.9 0.0 0.00027 20.8 0.0 1.5 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase Methyltransf_9 PF08003.11 CCF72890.1 - 0.00025 20.1 0.0 0.00035 19.6 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_18 PF12847.7 CCF72890.1 - 0.0031 17.5 0.1 0.0051 16.8 0.1 1.3 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 CCF72890.1 - 0.0075 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 CMAS PF02353.20 CCF72890.1 - 0.028 13.7 0.0 0.039 13.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_16 PF10294.9 CCF72890.1 - 0.032 14.0 0.1 0.049 13.4 0.1 1.3 1 0 0 1 1 1 0 Lysine methyltransferase DUF1676 PF07898.13 CCF72891.1 - 0.01 15.9 0.5 0.026 14.5 0.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1676) Ribosomal_L7Ae PF01248.26 CCF72892.1 - 3.1e-20 71.7 1.7 4.3e-20 71.2 0.9 1.6 2 0 0 2 2 2 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Ribosomal_L5e PF17144.4 CCF72893.1 - 5.2e-74 247.7 0.4 9.9e-74 246.8 0.4 1.5 1 0 0 1 1 1 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 CCF72893.1 - 1.4e-29 102.8 7.1 1.4e-29 102.8 7.1 1.9 2 0 0 2 2 2 1 Ribosomal L18 C-terminal region KH_6 PF15985.5 CCF72894.1 - 4.8e-09 36.4 0.0 1.3e-08 35.0 0.0 1.8 1 0 0 1 1 1 1 KH domain ECR1_N PF14382.6 CCF72894.1 - 5e-06 26.2 0.0 8.6e-06 25.5 0.0 1.4 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region Ribosomal_L29e PF01779.17 CCF72895.1 - 7.2e-20 71.0 15.4 1e-19 70.5 15.4 1.2 1 0 0 1 1 1 1 Ribosomal L29e protein family Peptidase_C12 PF01088.21 CCF72896.1 - 6.2e-48 163.3 0.0 7.7e-48 163.0 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 HSM3_N PF18795.1 CCF72896.1 - 0.056 12.8 0.5 0.079 12.4 0.5 1.4 1 1 0 1 1 1 0 DNA mismatch repair protein HSM3, N terminal domain PRESAN PF09687.10 CCF72897.1 - 0.11 13.1 9.3 0.25 11.9 9.3 1.6 1 0 0 1 1 1 0 Plasmodium RESA N-terminal MRP-S34 PF16053.5 CCF72897.1 - 0.11 12.1 0.0 0.23 11.1 0.0 1.5 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S34 ISP3_C PF18045.1 CCF72898.1 - 9.5e-14 51.2 1.2 2e-13 50.2 1.2 1.5 1 0 0 1 1 1 1 ISP3 C-terminal ISP1_C PF18161.1 CCF72898.1 - 1.8e-12 47.2 0.8 3.6e-12 46.2 0.8 1.5 1 0 0 1 1 1 1 ISP1 C-terminal ENTH PF01417.20 CCF72898.1 - 1.1e-09 38.4 0.6 1.7e-07 31.3 0.2 2.7 2 0 0 2 2 2 2 ENTH domain VHS PF00790.19 CCF72898.1 - 0.0067 16.3 0.0 0.026 14.4 0.0 2.0 1 0 0 1 1 1 1 VHS domain Ribosomal_L27e PF01777.18 CCF72899.1 - 1e-25 89.9 7.3 1.4e-25 89.5 7.3 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 CCF72899.1 - 0.00074 19.4 0.2 0.002 18.0 0.2 1.7 1 0 0 1 1 1 1 KOW motif CHB_HEX PF03173.13 CCF72899.1 - 0.05 13.3 0.0 0.063 13.0 0.0 1.2 1 0 0 1 1 1 0 Putative carbohydrate binding domain zf-SNAP50_C PF12251.8 CCF72900.1 - 4.7e-42 143.9 6.0 4.7e-42 143.9 6.0 2.0 2 0 0 2 2 2 1 snRNA-activating protein of 50kDa MW C terminal zf-C3HC4_3 PF13920.6 CCF72900.1 - 0.029 14.2 2.1 0.095 12.6 2.1 2.0 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) SANT_DAMP1_like PF16282.5 CCF72901.1 - 0.00011 22.3 1.7 0.00029 21.0 1.7 1.7 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 IGR PF09597.10 CCF72901.1 - 0.00097 19.2 0.0 0.0023 18.0 0.0 1.7 1 0 0 1 1 1 1 IGR protein motif Myb_DNA-bind_6 PF13921.6 CCF72901.1 - 0.028 14.7 1.7 0.051 13.8 0.6 2.0 2 0 0 2 2 2 0 Myb-like DNA-binding domain Pep3_Vps18 PF05131.14 CCF72902.1 - 1.6e-18 66.9 1.7 8.8e-18 64.5 0.7 2.4 2 0 0 2 2 2 1 Pep3/Vps18/deep orange family zf-RING_11 PF17123.5 CCF72902.1 - 4.6 7.1 11.9 16 5.4 11.9 2.0 1 0 0 1 1 1 0 RING-like zinc finger UCR_hinge PF02320.16 CCF72903.1 - 4.7e-14 52.3 7.1 1.2e-13 51.0 7.1 1.6 1 1 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein zf-Tim10_DDP PF02953.15 CCF72903.1 - 0.022 14.4 3.4 0.79 9.4 0.2 2.2 2 0 0 2 2 2 0 Tim10/DDP family zinc finger PRP3 PF08572.10 CCF72904.1 - 8.3e-57 192.5 16.5 2.1e-56 191.2 16.5 1.7 1 0 0 1 1 1 1 pre-mRNA processing factor 3 (PRP3) DUF1115 PF06544.12 CCF72904.1 - 4.1e-26 91.8 7.0 5.4e-25 88.2 0.2 3.2 2 2 0 2 2 2 1 Protein of unknown function (DUF1115) AAA_18 PF13238.6 CCF72904.1 - 1.6 9.3 5.1 2.5 8.6 3.5 2.3 1 1 1 2 2 2 0 AAA domain HORMA PF02301.18 CCF72905.1 - 5e-22 78.5 1.1 5.9e-22 78.3 1.1 1.1 1 0 0 1 1 1 1 HORMA domain Gar1 PF04410.14 CCF72906.1 - 5.1e-30 104.3 0.7 6.3e-30 104.0 0.7 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region FtsJ PF01728.19 CCF72907.1 - 3.8e-47 160.7 0.0 4.5e-47 160.4 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Annexin_like PF18411.1 CCF72907.1 - 0.11 12.7 0.0 0.34 11.2 0.0 1.8 2 0 0 2 2 2 0 Annexin-like domain tRNA_lig_CPD PF08302.11 CCF72908.1 - 0.074 12.5 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Fungal tRNA ligase phosphodiesterase domain Ribosomal_S27e PF01667.17 CCF72911.1 - 6.8e-25 86.5 5.5 8.2e-25 86.3 5.5 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 zf-LSD1 PF06943.12 CCF72911.1 - 0.0096 15.7 3.3 0.15 11.9 0.6 2.5 2 1 0 2 2 2 1 LSD1 zinc finger TF_Zn_Ribbon PF08271.12 CCF72911.1 - 0.017 14.6 0.6 0.027 14.0 0.6 1.3 1 0 0 1 1 1 0 TFIIB zinc-binding CDH-cyt PF16010.5 CCF72911.1 - 0.096 12.4 0.0 0.15 11.8 0.0 1.4 1 1 1 2 2 2 0 Cytochrome domain of cellobiose dehydrogenase Phage_integrase PF00589.22 CCF72912.1 - 1.8e-20 73.4 0.0 5.6e-20 71.8 0.0 1.8 2 0 0 2 2 2 1 Phage integrase family zinc_ribbon_2 PF13240.6 CCF72912.1 - 0.0018 18.0 0.8 0.0018 18.0 0.8 1.8 2 0 0 2 2 2 1 zinc-ribbon domain DZR PF12773.7 CCF72912.1 - 0.0054 16.7 1.1 0.0054 16.7 1.1 1.7 2 0 0 2 2 2 1 Double zinc ribbon Phage_int_SAM_5 PF13102.6 CCF72912.1 - 0.0075 16.6 0.4 0.022 15.1 0.2 1.9 2 0 0 2 2 2 1 Phage integrase SAM-like domain Phage_int_SAM_3 PF14659.6 CCF72912.1 - 0.036 14.3 0.0 0.11 12.7 0.0 1.9 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain zinc_ribbon_15 PF17032.5 CCF72912.1 - 0.075 13.8 2.0 0.11 13.3 0.4 2.0 2 0 0 2 2 2 0 zinc-ribbon family Fer4_2 PF12797.7 CCF72912.1 - 1.2 9.3 3.3 18 5.7 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain GNAT_acetyltr_2 PF13718.6 CCF72913.1 - 2.5 7.4 12.5 1 8.7 1.0 2.0 1 1 1 2 2 2 0 GNAT acetyltransferase 2 Asp-B-Hydro_N PF05279.11 CCF72913.1 - 4.2 7.4 21.2 5 7.1 21.2 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region DUF2894 PF11445.8 CCF72913.1 - 6.9 7.1 12.7 8 6.9 12.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2894) Ribosomal_L24e PF01246.20 CCF72914.1 - 9.1e-24 83.5 1.3 9.1e-24 83.5 1.3 1.5 2 0 0 2 2 2 1 Ribosomal protein L24e DCP2 PF05026.13 CCF72915.1 - 3.1e-19 69.1 4.6 2.6e-18 66.1 0.7 2.5 2 0 0 2 2 2 1 Dcp2, box A domain NUDIX PF00293.28 CCF72915.1 - 8.6e-14 51.7 0.0 1.6e-13 50.8 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain Pneumo_M2 PF07380.11 CCF72915.1 - 0.025 14.8 1.2 0.14 12.4 0.1 2.8 3 0 0 3 3 3 0 Pneumovirus M2 protein CPSase_L_D2 PF02786.17 CCF72916.1 - 1.1e-94 315.9 0.0 1.2e-68 230.8 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_sm_chain PF00988.22 CCF72916.1 - 2.4e-39 134.1 0.1 5.3e-39 133.0 0.1 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 CCF72916.1 - 1.5e-38 132.5 0.0 4.7e-38 130.9 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase class-I CPSase_L_D3 PF02787.19 CCF72916.1 - 2.7e-33 114.9 0.2 6.7e-33 113.6 0.2 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATPgrasp_Ter PF15632.6 CCF72916.1 - 4.9e-13 49.0 0.1 2.3e-06 27.4 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 CCF72916.1 - 5.7e-12 45.6 0.0 3.5e-08 33.2 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 CCF72916.1 - 2e-10 40.6 0.1 9.9e-07 28.5 0.0 2.7 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus Peptidase_C26 PF07722.13 CCF72916.1 - 5.7e-08 32.8 0.7 0.0011 18.7 0.1 2.5 1 1 0 2 2 2 2 Peptidase C26 DJ-1_PfpI PF01965.24 CCF72916.1 - 6.5e-05 22.8 0.0 0.011 15.6 0.0 2.7 3 0 0 3 3 3 1 DJ-1/PfpI family ATP-grasp_3 PF02655.14 CCF72916.1 - 0.0027 17.8 0.1 0.19 11.8 0.0 2.7 2 0 0 2 2 2 1 ATP-grasp domain NBD_C PF17042.5 CCF72916.1 - 0.029 14.9 0.0 0.14 12.7 0.0 2.0 2 0 0 2 2 2 0 Nucleotide-binding C-terminal domain MIF PF01187.18 CCF72916.1 - 0.047 14.0 0.0 2.5 8.4 0.0 2.5 2 0 0 2 2 2 0 Macrophage migration inhibitory factor (MIF) GSH-S_ATP PF02955.16 CCF72916.1 - 0.059 12.8 0.0 0.13 11.7 0.0 1.5 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain MGS PF02142.22 CCF72916.1 - 0.14 12.3 0.4 1.6 9.0 0.0 2.9 3 0 0 3 3 2 0 MGS-like domain Pkinase PF00069.25 CCF72917.1 - 5.8e-57 193.1 0.0 1.1e-56 192.1 0.0 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF72917.1 - 5.8e-22 78.2 0.1 2.4e-18 66.4 0.1 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 CCF72917.1 - 0.00069 19.0 0.0 0.00087 18.7 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF72917.1 - 0.0013 18.7 0.1 0.006 16.5 0.1 1.8 1 1 1 2 2 2 1 Phosphotransferase enzyme family Choline_kinase PF01633.20 CCF72917.1 - 0.0017 17.9 0.0 0.0028 17.3 0.0 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase Pox_ser-thr_kin PF05445.11 CCF72917.1 - 0.011 14.8 1.0 0.018 14.1 1.0 1.3 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 CCF72917.1 - 0.049 13.0 0.0 2.9 7.1 0.0 2.2 2 0 0 2 2 2 0 Kinase-like CSN8_PSD8_EIF3K PF10075.9 CCF72918.1 - 7.9e-20 71.3 0.0 1.4e-19 70.5 0.0 1.4 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family SAC3_GANP PF03399.16 CCF72918.1 - 0.051 12.9 0.2 0.071 12.5 0.2 1.3 1 0 0 1 1 1 0 SAC3/GANP family zf-RING_2 PF13639.6 CCF72919.1 - 9.1e-11 41.9 8.5 2.3e-10 40.6 8.5 1.7 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 CCF72919.1 - 9.3e-07 28.5 3.3 9.3e-07 28.5 3.3 1.9 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4_3 PF13920.6 CCF72919.1 - 4.1e-06 26.6 5.1 8e-06 25.6 5.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 CCF72919.1 - 5.7e-06 26.5 6.3 1.3e-05 25.4 6.3 1.6 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 CCF72919.1 - 2.6e-05 23.9 5.6 2.6e-05 23.9 5.6 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF72919.1 - 3.4e-05 23.7 5.2 6.1e-05 22.9 5.2 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Zn_ribbon_17 PF17120.5 CCF72919.1 - 5.3e-05 22.8 5.0 0.00013 21.5 5.0 1.6 1 0 0 1 1 1 1 Zinc-ribbon, C4HC2 type zf-C3HC4 PF00097.25 CCF72919.1 - 0.00019 21.2 6.9 0.0003 20.6 6.0 1.8 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF72919.1 - 0.00024 20.9 4.6 0.00048 19.9 4.6 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 CCF72919.1 - 0.00045 20.2 2.9 0.00045 20.2 2.9 1.8 2 0 0 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 CCF72919.1 - 0.018 15.1 1.0 0.044 13.8 1.0 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 CCF72919.1 - 0.42 10.8 9.7 2.6 8.3 8.6 2.7 2 1 0 2 2 2 0 FANCL C-terminal domain zf-RING_9 PF13901.6 CCF72919.1 - 2.3 8.1 7.1 0.79 9.7 3.3 1.9 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon zf-RING-like PF08746.11 CCF72919.1 - 3.2 8.1 5.8 5.9 7.3 5.8 1.4 1 0 0 1 1 1 0 RING-like domain zf-RING_4 PF14570.6 CCF72919.1 - 3.5 7.5 8.2 1.9 8.4 5.3 2.0 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Lipocalin_4 PF13648.6 CCF72920.1 - 0.28 12.2 2.5 1.1 10.2 1.8 2.0 1 1 0 1 1 1 0 Lipocalin-like domain Citrate_synt PF00285.21 CCF72922.1 - 7.4e-14 51.6 0.0 1e-08 34.7 0.0 2.2 2 0 0 2 2 2 2 Citrate synthase, C-terminal domain Aldo_ket_red PF00248.21 CCF72923.1 - 1.5e-51 175.4 0.0 2.1e-51 174.8 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family DnaJ PF00226.31 CCF72925.1 - 9e-05 22.5 0.1 0.00014 21.9 0.1 1.3 1 0 0 1 1 1 1 DnaJ domain CS PF04969.16 CCF72926.1 - 1.2e-05 26.2 0.9 3.3e-05 24.8 0.9 1.8 1 0 0 1 1 1 1 CS domain DUF3959 PF13105.6 CCF72928.1 - 0.0067 16.0 0.7 0.0068 15.9 0.7 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3959) THP2 PF09432.10 CCF72928.1 - 0.0097 16.0 2.6 0.2 11.7 0.1 2.1 1 1 1 2 2 2 2 Tho complex subunit THP2 HAUS-augmin3 PF14932.6 CCF72928.1 - 0.017 14.7 2.2 0.22 11.0 2.2 1.9 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 DUF2203 PF09969.9 CCF72928.1 - 0.026 15.2 1.2 0.03 15.0 1.2 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) FlaC_arch PF05377.11 CCF72928.1 - 0.068 13.6 1.8 0.14 12.6 0.8 2.1 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) JIP_LZII PF16471.5 CCF72928.1 - 1 9.6 8.5 0.48 10.6 2.3 2.5 2 1 0 2 2 2 0 JNK-interacting protein leucine zipper II Kre28 PF17097.5 CCF72930.1 - 0.068 12.1 0.4 0.19 10.6 0.1 1.7 1 1 1 2 2 2 0 Spindle pole body component Ribosomal_L12 PF00542.19 CCF72931.1 - 2.7e-13 50.1 5.7 3.1e-12 46.7 3.0 2.3 2 0 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 CCF72931.1 - 5.6e-10 38.8 1.1 9.2e-10 38.1 0.3 1.8 2 0 0 2 2 2 1 Ribosomal protein L7/L12 dimerisation domain FTO_NTD PF12933.7 CCF72931.1 - 0.074 12.3 0.2 0.098 11.9 0.2 1.1 1 0 0 1 1 1 0 FTO catalytic domain Tom22 PF04281.13 CCF72932.1 - 9.8e-06 25.4 0.1 1.1e-05 25.2 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial import receptor subunit Tom22 DUF4149 PF13664.6 CCF72932.1 - 0.0058 16.9 0.2 0.019 15.3 0.1 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4149) zf-U1 PF06220.12 CCF72933.1 - 4.4e-19 68.0 2.5 5.6e-19 67.6 2.5 1.1 1 0 0 1 1 1 1 U1 zinc finger zf-RanBP PF00641.18 CCF72934.1 - 8.6e-07 28.2 7.8 8.6e-07 28.2 7.8 2.8 3 0 0 3 3 3 1 Zn-finger in Ran binding protein and others FeS PF04060.13 CCF72934.1 - 6.6e-05 22.5 10.1 4.3e+02 0.7 0.0 11.2 13 0 0 13 13 13 0 Putative Fe-S cluster CHB_HEX_C PF03174.13 CCF72934.1 - 0.065 13.2 4.1 65 3.6 0.0 5.6 4 1 2 7 7 7 0 Chitobiase/beta-hexosaminidase C-terminal domain DUF4521 PF15021.6 CCF72936.1 - 0.092 12.7 3.9 0.11 12.4 3.9 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4521) IMUP PF15761.5 CCF72936.1 - 0.99 10.1 11.1 1.7 9.4 11.0 1.6 1 1 0 1 1 1 0 Immortalisation up-regulated protein SR-25 PF10500.9 CCF72936.1 - 2.1 7.9 12.4 2.7 7.6 12.4 1.2 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein Oest_recep PF02159.15 CCF72937.1 - 0.066 13.7 1.4 0.12 12.8 1.4 1.4 1 0 0 1 1 1 0 Oestrogen receptor ArfGap PF01412.18 CCF72937.1 - 0.3 11.2 4.0 0.58 10.3 3.4 1.8 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf Nudc_N PF14050.6 CCF72939.1 - 3.2e-13 49.4 0.3 5.6e-13 48.7 0.3 1.4 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. CS PF04969.16 CCF72939.1 - 2.9e-07 31.4 5.0 8.8e-07 29.9 5.0 1.9 1 0 0 1 1 1 1 CS domain UQ_con PF00179.26 CCF72940.1 - 7.4e-50 168.2 0.0 8.4e-50 168.1 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 CCF72940.1 - 0.037 14.3 0.2 0.064 13.6 0.2 1.3 1 1 0 1 1 1 0 RWD domain Prok-E2_B PF14461.6 CCF72940.1 - 0.041 13.6 0.0 0.049 13.3 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B RRM_1 PF00076.22 CCF72941.1 - 9.7e-14 51.0 0.2 1.5e-13 50.3 0.2 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CDC45 PF02724.14 CCF72941.1 - 3.8 5.7 13.0 5.3 5.2 13.0 1.3 1 0 0 1 1 1 0 CDC45-like protein CLTH PF10607.9 CCF72943.1 - 0.00075 19.4 2.4 0.041 13.8 0.1 2.9 2 1 0 3 3 3 2 CTLH/CRA C-terminal to LisH motif domain Pox_VP8_L4R PF04498.12 CCF72943.1 - 0.015 14.9 1.0 0.028 14.0 0.8 1.5 1 1 0 1 1 1 0 Poxvirus nucleic acid binding protein VP8/L4R MFS_1 PF07690.16 CCF72945.1 - 4.1e-25 88.5 49.3 6.1e-23 81.3 27.4 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 CCF72945.1 - 4.8e-09 35.6 46.5 5.2e-09 35.5 19.3 2.3 2 0 0 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 CCF72945.1 - 0.00011 20.7 1.1 0.00011 20.7 1.1 3.7 2 2 2 4 4 4 3 Organic Anion Transporter Polypeptide (OATP) family ER_lumen_recept PF00810.18 CCF72946.1 - 6.2e-34 117.9 9.1 6.2e-34 117.9 9.1 1.8 2 0 0 2 2 2 1 ER lumen protein retaining receptor WGG PF10273.9 CCF72949.1 - 6.2e-22 78.0 0.1 9.1e-22 77.5 0.1 1.2 1 0 0 1 1 1 1 Pre-rRNA-processing protein TSR2 RIBIOP_C PF04950.12 CCF72950.1 - 2.3e-66 224.2 0.8 3.1e-66 223.8 0.1 1.5 2 0 0 2 2 2 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal AARP2CN PF08142.12 CCF72950.1 - 3.1e-20 72.0 0.2 3.5e-19 68.7 0.2 2.7 1 1 0 1 1 1 1 AARP2CN (NUC121) domain GTP_EFTU PF00009.27 CCF72950.1 - 1.6e-07 31.0 0.5 8.8e-06 25.4 0.0 2.9 2 1 1 3 3 3 1 Elongation factor Tu GTP binding domain AAA PF00004.29 CCF72950.1 - 0.0013 19.2 0.0 0.0043 17.5 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 CCF72950.1 - 0.0015 18.6 0.0 0.0076 16.3 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_22 PF13401.6 CCF72950.1 - 0.0015 18.8 0.0 0.005 17.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 CCF72950.1 - 0.008 16.2 0.2 0.04 14.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 CCF72950.1 - 0.0085 16.0 0.0 0.031 14.2 0.0 1.9 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 CCF72950.1 - 0.0094 15.9 0.4 0.035 14.0 0.0 2.2 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_16 PF13191.6 CCF72950.1 - 0.025 15.0 0.0 0.047 14.1 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain RNA_helicase PF00910.22 CCF72950.1 - 0.11 12.9 0.0 0.49 10.8 0.0 2.2 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 CCF72950.1 - 0.21 12.2 0.0 0.21 12.2 0.0 3.0 3 1 0 3 3 3 0 AAA domain AAA_11 PF13086.6 CCF72950.1 - 0.23 11.2 0.1 0.23 11.2 0.1 2.9 3 0 0 3 3 3 0 AAA domain Phage_TTP_1 PF04630.12 CCF72950.1 - 7.3 5.9 8.2 18 4.6 1.7 2.9 3 0 0 3 3 3 0 Phage tail tube protein zf-CW PF07496.15 CCF72952.1 - 3.8e-34 116.5 21.7 4.6e-17 61.8 7.9 2.8 2 0 0 2 2 2 2 CW-type Zinc Finger PHD PF00628.29 CCF72952.1 - 5.2 7.0 8.3 22 5.0 2.5 3.1 2 1 0 2 2 2 0 PHD-finger EF-hand_1 PF00036.32 CCF72953.1 - 1.2e-30 102.7 12.5 1.5e-09 36.7 0.9 4.3 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 CCF72953.1 - 5.4e-24 84.4 7.1 4.3e-12 46.3 1.8 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 CCF72953.1 - 1.8e-22 77.3 8.3 6e-07 28.9 0.0 4.8 4 2 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 CCF72953.1 - 2.6e-18 65.6 4.7 2.5e-08 33.6 0.2 3.9 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 CCF72953.1 - 1.2e-12 46.7 18.4 0.00021 20.7 1.5 5.1 4 2 2 6 6 6 3 EF hand EF-hand_9 PF14658.6 CCF72953.1 - 1.1e-11 44.9 0.1 4.4e-06 26.9 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 CCF72953.1 - 3.8e-05 23.6 5.4 0.11 12.5 0.4 4.0 1 1 3 4 4 4 1 Cytoskeletal-regulatory complex EF hand Dockerin_1 PF00404.18 CCF72953.1 - 6.5e-05 23.1 0.1 0.52 10.5 0.0 2.8 3 0 0 3 3 3 2 Dockerin type I domain SurA_N_2 PF13623.6 CCF72953.1 - 0.013 15.4 0.5 0.28 11.0 0.3 2.3 2 1 0 2 2 2 0 SurA N-terminal domain SurA_N_3 PF13624.6 CCF72953.1 - 0.017 14.9 0.5 0.84 9.4 0.2 2.1 2 0 0 2 2 2 0 SurA N-terminal domain RTP PF02334.16 CCF72953.1 - 0.023 15.3 0.1 0.045 14.4 0.0 1.5 1 1 0 1 1 1 0 Replication terminator protein SUB1_ProdP9 PF18213.1 CCF72953.1 - 0.044 13.6 0.4 0.094 12.6 0.4 1.6 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 DUF21 PF01595.20 CCF72953.1 - 0.093 12.4 0.2 0.14 11.9 0.2 1.2 1 0 0 1 1 1 0 Cyclin M transmembrane N-terminal domain Acetyltransf_11 PF13720.6 CCF72953.1 - 0.14 12.6 0.3 26 5.4 0.1 2.8 2 1 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IspD PF01128.19 CCF72954.1 - 1.5e-32 113.1 0.0 2.2e-29 102.8 0.0 2.0 1 1 1 2 2 2 2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF5442 PF17514.2 CCF72954.1 - 0.0073 16.5 1.2 0.012 15.8 0.5 1.7 2 0 0 2 2 2 1 Family of unknown function (DUF5442) Asp PF00026.23 CCF72955.1 - 2e-58 198.3 0.0 4.9e-40 137.9 0.0 2.1 2 0 0 2 2 2 2 Eukaryotic aspartyl protease TAXi_N PF14543.6 CCF72955.1 - 4.2e-06 27.1 2.9 9.1e-05 22.8 1.6 3.1 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 CCF72955.1 - 0.0028 17.4 0.0 0.0064 16.3 0.0 1.6 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal Mt_ATP-synt_D PF05873.12 CCF72956.1 - 4.9e-07 29.7 0.1 4.2e-06 26.7 0.0 2.3 2 0 0 2 2 2 1 ATP synthase D chain, mitochondrial (ATP5H) RRM_1 PF00076.22 CCF72957.1 - 1.4e-05 24.8 0.0 2.5e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pkinase PF00069.25 CCF72958.1 - 1.3e-28 100.1 0.0 1.6e-28 99.8 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF72958.1 - 1.1e-16 60.9 0.0 1.4e-16 60.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 CCF72958.1 - 7.6e-09 34.8 0.1 1e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 CCF72958.1 - 8.2e-05 22.6 0.0 0.0014 18.6 0.0 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 CCF72958.1 - 0.016 14.2 0.2 0.016 14.2 0.2 1.5 2 0 0 2 2 2 0 Poxvirus serine/threonine protein kinase SMC_N PF02463.19 CCF72959.1 - 2e-36 125.5 48.0 1.3e-34 119.6 48.0 4.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 CCF72959.1 - 2.2e-17 63.4 0.0 1.3e-16 61.0 0.0 2.4 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_23 PF13476.6 CCF72959.1 - 2e-16 61.1 13.5 2e-16 61.1 13.5 6.8 3 2 3 6 6 6 1 AAA domain AAA_21 PF13304.6 CCF72959.1 - 2.4e-14 53.9 11.5 3.8e-07 30.2 0.4 3.4 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CCF72959.1 - 3.9e-14 53.2 23.0 3.9e-14 53.2 23.0 5.0 3 3 1 4 4 4 2 AAA ATPase domain AAA_29 PF13555.6 CCF72959.1 - 0.0012 18.5 0.0 0.003 17.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 CCF72959.1 - 0.0021 18.6 0.3 0.0021 18.6 0.3 6.4 3 2 0 3 3 3 1 ABC transporter KORA PF16509.5 CCF72959.1 - 0.062 13.6 1.1 0.41 11.0 1.1 2.5 1 0 0 1 1 1 0 TrfB plasmid transcriptional repressor DEAD PF00270.29 CCF72959.1 - 0.07 12.9 4.4 0.24 11.1 0.0 3.6 2 2 0 2 2 2 0 DEAD/DEAH box helicase Rrp44_CSD1 PF17216.3 CCF72960.1 - 0.062 13.0 0.5 0.091 12.5 0.5 1.4 1 1 0 1 1 1 0 Rrp44-like cold shock domain Decorin_bind PF02352.15 CCF72961.1 - 0.076 13.3 0.0 0.14 12.4 0.0 1.5 1 1 0 1 1 1 0 Decorin binding protein COG4 PF08318.12 CCF72962.1 - 1.4e-20 73.7 1.4 3e-20 72.6 1.0 1.7 1 1 1 2 2 2 1 COG4 transport protein DIL PF01843.19 CCF72962.1 - 0.0015 18.8 0.2 1.5 9.2 0.0 3.5 3 1 0 3 3 3 2 DIL domain IFT57 PF10498.9 CCF72963.1 - 0.0016 17.5 0.8 0.0017 17.4 0.8 1.0 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Spc7 PF08317.11 CCF72963.1 - 0.0058 15.5 0.7 0.0058 15.5 0.7 1.0 1 0 0 1 1 1 1 Spc7 kinetochore protein YukC PF10140.9 CCF72963.1 - 0.008 15.0 0.6 0.0092 14.8 0.6 1.0 1 0 0 1 1 1 1 WXG100 protein secretion system (Wss), protein YukC PI3K_P85_iSH2 PF16454.5 CCF72963.1 - 0.016 14.8 0.2 0.017 14.7 0.2 1.0 1 0 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Sec23_trunk PF04811.15 CCF72963.1 - 0.018 14.6 0.1 0.018 14.6 0.1 1.0 1 0 0 1 1 1 0 Sec23/Sec24 trunk domain Spc24 PF08286.11 CCF72963.1 - 0.022 15.0 1.1 0.023 14.9 1.1 1.1 1 0 0 1 1 1 0 Spc24 subunit of Ndc80 DUF2433 PF10360.9 CCF72963.1 - 0.04 14.0 0.2 0.042 14.0 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) BRE1 PF08647.11 CCF72963.1 - 0.044 13.9 2.0 0.062 13.4 2.0 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase MLD PF11647.8 CCF72963.1 - 0.051 13.8 0.7 0.085 13.1 0.2 1.6 1 1 1 2 2 2 0 Membrane Localization Domain CdiA_C PF18451.1 CCF72963.1 - 0.088 13.0 0.4 0.1 12.8 0.4 1.0 1 0 0 1 1 1 0 Contact-dependent growth inhibition CdiA C-terminal domain Lactamase_B_6 PF16661.5 CCF72964.1 - 1e-27 96.8 0.5 2.7e-27 95.4 0.5 1.7 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Beta-Casp PF10996.8 CCF72964.1 - 4.8e-14 52.6 0.0 1.5e-13 51.0 0.0 1.9 1 0 0 1 1 1 1 Beta-Casp domain Lactamase_B PF00753.27 CCF72964.1 - 7e-05 22.9 0.0 0.00013 22.1 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CCF72964.1 - 0.053 13.0 0.0 0.093 12.2 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain zf-C3HC4_3 PF13920.6 CCF72965.1 - 5.6e-08 32.5 9.1 9.7e-08 31.8 9.1 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF72965.1 - 2.3e-07 30.6 9.6 5.2e-07 29.4 9.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF72965.1 - 1.6e-06 27.9 8.7 3.4e-06 26.8 8.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF72965.1 - 9.1e-06 25.6 9.1 2.4e-05 24.3 9.1 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 CCF72965.1 - 2e-05 24.8 10.3 4e-05 23.9 10.3 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 CCF72965.1 - 2.8e-05 24.0 10.5 5.5e-05 23.0 10.5 1.5 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 CCF72965.1 - 5.4e-05 23.0 8.8 0.0001 22.1 8.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 CCF72965.1 - 0.00042 20.4 7.1 0.0009 19.4 7.1 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING bZIP_1 PF00170.21 CCF72965.1 - 0.011 15.8 3.0 0.011 15.8 3.0 6.5 8 0 0 8 8 8 0 bZIP transcription factor zf-RING_6 PF14835.6 CCF72965.1 - 0.22 11.4 4.3 0.5 10.3 4.3 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein DUF4140 PF13600.6 CCF72965.1 - 0.35 11.3 9.1 12 6.4 0.1 4.2 2 1 2 4 4 4 0 N-terminal domain of unknown function (DUF4140) zf-RING_4 PF14570.6 CCF72965.1 - 1 9.2 8.3 2.1 8.2 8.3 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain Tctex-1 PF03645.13 CCF72965.1 - 2.6 8.3 6.7 0.45 10.8 1.3 2.6 2 2 0 2 2 2 0 Tctex-1 family zf-UDP PF14569.6 CCF72965.1 - 6.4 7.0 8.2 1.4 9.1 3.8 2.1 2 1 0 2 2 2 0 Zinc-binding RING-finger Mvb12 PF09452.10 CCF72965.1 - 9.6 6.7 11.8 9.1 6.8 0.7 4.0 4 0 0 4 4 4 0 ESCRT-I subunit Mvb12 HSP70 PF00012.20 CCF72966.1 - 8.8e-259 859.7 7.0 1e-258 859.5 7.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 CCF72966.1 - 5.9e-16 58.2 0.9 3.5e-15 55.7 0.3 2.0 2 0 0 2 2 2 1 MreB/Mbl protein FGGY_C PF02782.16 CCF72966.1 - 4.2e-05 23.4 0.0 9.5e-05 22.2 0.0 1.6 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain APP_N PF02177.16 CCF72966.1 - 0.0049 17.2 0.2 0.013 15.9 0.2 1.7 1 0 0 1 1 1 1 Amyloid A4 N-terminal heparin-binding DDR PF08841.10 CCF72966.1 - 0.005 15.9 0.2 0.77 8.7 0.1 2.3 2 0 0 2 2 2 2 Diol dehydratase reactivase ATPase-like domain DUF2703 PF10865.8 CCF72966.1 - 0.0065 16.7 2.3 0.035 14.3 0.7 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF2703) Hydantoinase_A PF01968.18 CCF72966.1 - 0.038 13.2 0.3 0.098 11.9 0.3 1.7 1 0 0 1 1 1 0 Hydantoinase/oxoprolinase Radical_SAM_C PF16199.5 CCF72967.1 - 7.9e-19 67.5 0.2 1.7e-18 66.4 0.2 1.6 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 CCF72967.1 - 3.8e-16 59.9 0.1 2e-15 57.6 0.1 2.3 2 0 0 2 2 2 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 CCF72967.1 - 0.019 15.2 0.2 0.044 14.0 0.2 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family Lectin_leg-like PF03388.13 CCF72967.1 - 0.11 11.8 1.5 0.21 10.9 1.5 1.3 1 0 0 1 1 1 0 Legume-like lectin family ER PF01133.17 CCF72968.1 - 1e-34 118.5 0.7 1.1e-34 118.3 0.7 1.0 1 0 0 1 1 1 1 Enhancer of rudimentary NUT PF12881.7 CCF72968.1 - 0.039 12.4 0.0 0.045 12.2 0.0 1.0 1 0 0 1 1 1 0 NUT protein ERCC3_RAD25_C PF16203.5 CCF72970.1 - 1.7e-107 358.2 0.3 2.8e-107 357.6 0.3 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C_3 PF13625.6 CCF72970.1 - 1.1e-29 103.2 0.0 2.1e-29 102.3 0.0 1.5 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72970.1 - 4.2e-14 52.9 0.0 7.6e-14 52.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CCF72970.1 - 5.5e-12 46.0 0.3 2.3e-10 40.8 0.1 2.8 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Dynamin_M PF01031.20 CCF72971.1 - 9.1e-81 271.2 0.8 4.1e-80 269.1 0.0 2.3 3 0 0 3 3 3 1 Dynamin central region Dynamin_N PF00350.23 CCF72971.1 - 1.3e-51 175.0 0.1 4.6e-51 173.2 0.1 1.9 2 0 0 2 2 2 1 Dynamin family GED PF02212.18 CCF72971.1 - 1.2e-28 99.1 0.9 1.4e-27 95.7 1.0 2.5 2 0 0 2 2 2 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 CCF72971.1 - 1.7e-06 28.1 0.0 4.8e-06 26.6 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase Condensin2nSMC PF12422.8 CCF72971.1 - 0.015 15.5 0.1 0.16 12.1 0.0 2.5 2 0 0 2 2 2 0 Condensin II non structural maintenance of chromosomes subunit FeoB_N PF02421.18 CCF72971.1 - 0.034 13.7 1.4 4.5 6.8 0.0 2.6 3 0 0 3 3 3 0 Ferrous iron transport protein B VirE PF05272.11 CCF72971.1 - 0.084 12.6 0.0 5.1 6.8 0.0 2.4 2 0 0 2 2 2 0 Virulence-associated protein E ubiquitin PF00240.23 CCF72972.1 - 8.6e-27 92.7 1.8 1.1e-26 92.4 1.8 1.1 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 CCF72972.1 - 6.4e-10 38.7 2.7 7.6e-10 38.5 2.7 1.1 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 CCF72972.1 - 9e-05 22.6 1.6 0.00032 20.8 1.6 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 CCF72972.1 - 0.001 19.3 0.5 0.0015 18.8 0.5 1.3 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_2 PF14560.6 CCF72972.1 - 0.0012 19.3 0.7 0.0044 17.4 0.6 2.0 1 1 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 CCF72972.1 - 0.0089 16.6 0.2 0.011 16.3 0.2 1.2 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 CCF72972.1 - 0.077 13.1 2.3 1.4 9.0 0.1 2.1 1 1 1 2 2 2 0 Ubiquitin-like domain TBK1_ULD PF18396.1 CCF72972.1 - 0.14 12.1 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain Rep_Org_C PF06926.11 CCF72973.1 - 0.063 13.6 0.5 0.21 11.9 0.5 1.9 1 0 0 1 1 1 0 Putative replisome organiser protein C-terminus Mito_carr PF00153.27 CCF72974.1 - 1e-66 220.9 5.5 4.2e-23 81.1 0.1 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Peptidase_C1 PF00112.23 CCF72975.1 - 5.2e-25 88.8 1.1 1.1e-24 87.8 1.1 1.5 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 CCF72975.1 - 2.8e-09 37.3 8.4 9.1e-09 35.6 8.4 2.0 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Pkinase PF00069.25 CCF72976.1 - 3.4e-63 213.5 0.0 4.7e-63 213.0 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF72976.1 - 1.1e-37 129.8 0.0 1.5e-37 129.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF72976.1 - 0.0021 17.4 0.0 0.0065 15.8 0.0 1.8 1 1 0 1 1 1 1 Kinase-like APH PF01636.23 CCF72976.1 - 0.0051 16.8 0.0 2 8.3 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family S4 PF01479.25 CCF72979.1 - 2.4e-05 24.0 0.0 5.5e-05 22.8 0.0 1.6 1 0 0 1 1 1 1 S4 domain PseudoU_synth_2 PF00849.22 CCF72979.1 - 0.0057 16.8 0.0 0.0087 16.2 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase RabGAP-TBC PF00566.18 CCF72980.1 - 3.7e-15 56.2 2.9 7.5e-15 55.2 2.9 1.5 1 0 0 1 1 1 1 Rab-GTPase-TBC domain RNA_pol_Rpb4 PF03874.16 CCF72981.1 - 0.05 13.9 0.8 4.4 7.6 0.9 2.5 1 1 0 1 1 1 0 RNA polymerase Rpb4 PK PF00224.21 CCF72982.1 - 1.7e-91 306.7 4.2 4.3e-48 164.0 0.2 2.3 2 0 0 2 2 2 2 Pyruvate kinase, barrel domain PK_C PF02887.16 CCF72982.1 - 0.15 12.3 0.2 0.38 11.0 0.2 1.8 1 0 0 1 1 1 0 Pyruvate kinase, alpha/beta domain zf-AD PF07776.15 CCF72983.1 - 0.041 14.1 4.5 8.6 6.7 0.5 3.2 2 1 1 3 3 3 0 Zinc-finger associated domain (zf-AD) Mic1 PF07035.12 CCF72985.1 - 9.4e-11 41.7 0.0 1.8e-10 40.7 0.0 1.4 1 0 0 1 1 1 1 Colon cancer-associated protein Mic1-like RAP PF08373.10 CCF72986.1 - 3.8e-15 55.7 0.1 1.4e-14 54.0 0.1 2.1 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 CCF72986.1 - 0.00057 20.0 0.0 0.0016 18.6 0.0 1.8 1 0 0 1 1 1 1 REase_MTES_1575 DUF676 PF05057.14 CCF72988.1 - 6.9e-31 107.5 0.6 1.3e-30 106.6 0.6 1.4 1 0 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 CCF72988.1 - 6.2e-08 32.8 1.0 8.7e-08 32.3 0.0 1.7 2 0 0 2 2 2 1 Palmitoyl protein thioesterase Hydrolase_4 PF12146.8 CCF72988.1 - 0.00096 18.5 0.0 0.0021 17.4 0.0 1.5 1 0 0 1 1 1 1 Serine aminopeptidase, S33 LCAT PF02450.15 CCF72988.1 - 0.0052 16.0 0.2 0.0093 15.2 0.2 1.3 1 0 0 1 1 1 1 Lecithin:cholesterol acyltransferase DUF900 PF05990.12 CCF72988.1 - 0.006 16.1 1.0 0.053 13.0 0.2 2.6 2 1 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) PGAP1 PF07819.13 CCF72988.1 - 0.028 14.1 0.1 0.059 13.1 0.1 1.5 1 0 0 1 1 1 0 PGAP1-like protein Abhydrolase_1 PF00561.20 CCF72988.1 - 0.064 12.9 0.0 0.15 11.7 0.0 1.6 1 0 0 1 1 1 0 alpha/beta hydrolase fold Asp_protease PF09668.10 CCF72989.1 - 6.2e-46 155.2 0.6 1.2e-45 154.3 0.6 1.5 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 CCF72989.1 - 1e-17 64.4 0.1 2.9e-17 63.0 0.1 1.8 2 0 0 2 2 2 1 gag-polyprotein putative aspartyl protease UBA_4 PF14555.6 CCF72989.1 - 1.2e-06 28.2 0.0 3.2e-06 26.8 0.0 1.8 1 0 0 1 1 1 1 UBA-like domain ubiquitin PF00240.23 CCF72989.1 - 1.3e-06 28.1 0.0 2.8e-06 27.0 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin family Asp_protease_2 PF13650.6 CCF72989.1 - 2.1e-06 28.3 0.0 4.6e-06 27.2 0.0 1.6 1 0 0 1 1 1 1 Aspartyl protease RVP PF00077.20 CCF72989.1 - 9.1e-05 22.7 0.1 0.00029 21.1 0.1 1.8 1 1 0 1 1 1 1 Retroviral aspartyl protease Peptidase_A3 PF02160.15 CCF72989.1 - 0.0022 17.5 0.5 0.0022 17.5 0.5 1.7 2 0 0 2 2 2 1 Cauliflower mosaic virus peptidase (A3) TAP_C PF03943.13 CCF72989.1 - 0.037 13.7 0.0 0.096 12.3 0.0 1.7 1 0 0 1 1 1 0 TAP C-terminal domain COPI_assoc PF08507.10 CCF72990.1 - 0.0011 19.0 5.4 0.0019 18.3 5.4 1.3 1 0 0 1 1 1 1 COPI associated protein DUF4655 PF15548.6 CCF72991.1 - 0.14 11.1 1.5 0.19 10.7 1.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4655) Sterile PF03015.19 CCF72992.1 - 0.0018 18.5 0.2 0.0076 16.4 0.2 2.0 1 0 0 1 1 1 1 Male sterility protein His_Phos_1 PF00300.22 CCF72992.1 - 0.002 17.8 0.0 0.25 11.0 0.0 3.0 3 0 0 3 3 3 1 Histidine phosphatase superfamily (branch 1) SUD-M PF11633.8 CCF72992.1 - 0.12 12.0 0.0 0.25 11.0 0.0 1.5 1 0 0 1 1 1 0 Single-stranded poly(A) binding domain MNSV_P7B PF06692.11 CCF72992.1 - 0.18 11.8 1.9 0.5 10.4 1.9 1.8 1 0 0 1 1 1 0 Melon necrotic spot virus P7B protein OHA PF14418.6 CCF72994.1 - 2.8e-21 75.1 0.1 9.1e-21 73.5 0.1 1.9 1 0 0 1 1 1 1 OST-HTH Associated domain OST-HTH PF12872.7 CCF72994.1 - 2.3e-07 30.5 0.0 4.6e-07 29.6 0.0 1.5 1 0 0 1 1 1 1 OST-HTH/LOTUS domain Tn916-Xis PF09035.10 CCF72994.1 - 0.058 13.6 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Excisionase from transposon Tn916 tRNA_bind PF01588.20 CCF72995.1 - 1.8e-27 95.3 0.2 4.6e-27 94.0 0.2 1.7 1 0 0 1 1 1 1 Putative tRNA binding domain GST_C PF00043.25 CCF72995.1 - 0.00017 21.7 0.0 0.00036 20.7 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 CCF72995.1 - 0.00037 20.6 0.0 0.001 19.2 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain DEAD PF00270.29 CCF72996.1 - 1e-43 149.1 0.2 2e-43 148.2 0.2 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF72996.1 - 8.2e-32 109.9 1.0 2.6e-31 108.3 0.1 2.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF72996.1 - 3.9e-05 23.7 0.0 7.3e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 CCF72996.1 - 0.00022 21.0 0.0 0.00041 20.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 CCF72996.1 - 0.00087 19.2 0.0 0.0017 18.3 0.0 1.4 1 0 0 1 1 1 1 Helicase AAA_19 PF13245.6 CCF72996.1 - 0.0015 18.9 0.2 0.0096 16.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain CMS1 PF14617.6 CCF72996.1 - 0.005 16.2 0.7 0.015 14.6 0.0 2.1 3 0 0 3 3 3 1 U3-containing 90S pre-ribosomal complex subunit tRNA-synt_1b PF00579.25 CCF72996.1 - 0.035 13.4 0.3 0.068 12.5 0.0 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) SWI2_SNF2 PF18766.1 CCF72996.1 - 0.057 13.1 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 SWI2/SNF2 ATPase AAA_22 PF13401.6 CCF72996.1 - 0.062 13.6 0.2 0.23 11.7 0.2 1.9 1 1 0 1 1 1 0 AAA domain Rb_C PF08934.10 CCF72998.1 - 0.043 13.6 0.8 0.054 13.3 0.8 1.2 1 0 0 1 1 1 0 Rb C-terminal domain DER1 PF04511.15 CCF72999.1 - 4.2e-45 154.0 16.8 4.8e-45 153.9 16.8 1.0 1 0 0 1 1 1 1 Der1-like family Kelch_3 PF13415.6 CCF73000.1 - 2e-19 69.4 2.7 2.7e-05 24.3 0.0 6.0 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_5 PF13854.6 CCF73000.1 - 3.8e-17 61.9 1.2 0.0075 16.2 0.0 6.1 7 0 0 7 7 7 4 Kelch motif Kelch_4 PF13418.6 CCF73000.1 - 7.4e-17 61.1 6.2 0.00012 22.0 0.0 5.9 5 1 0 5 5 5 4 Galactose oxidase, central domain Kelch_6 PF13964.6 CCF73000.1 - 1.8e-13 50.3 2.8 0.00066 19.9 0.0 5.3 5 0 0 5 5 5 3 Kelch motif Kelch_1 PF01344.25 CCF73000.1 - 4e-12 45.5 2.5 0.0043 16.6 0.0 4.9 5 0 0 5 5 5 4 Kelch motif HATPase_c_3 PF13589.6 CCF73000.1 - 1.3e-08 34.7 0.0 2.7e-08 33.7 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Kelch_2 PF07646.15 CCF73000.1 - 3.5e-08 33.1 8.1 0.092 12.8 1.0 4.8 4 0 0 4 4 4 3 Kelch motif Morc6_S5 PF17942.1 CCF73000.1 - 0.15 12.1 0.0 0.68 10.0 0.0 2.0 2 0 0 2 2 2 0 Morc6 ribosomal protein S5 domain 2-like RNA_pol_Rpc4 PF05132.14 CCF73001.1 - 5.5e-14 52.8 0.1 5.3e-13 49.6 0.1 2.1 1 1 0 1 1 1 1 RNA polymerase III RPC4 HATPase_c PF02518.26 CCF73001.1 - 0.1 13.1 0.1 0.17 12.4 0.1 1.5 1 1 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMC_N PF02463.19 CCF73002.1 - 8.7e-54 182.3 48.3 4.6e-52 176.6 48.3 3.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 CCF73002.1 - 6.6e-19 68.3 0.0 2.5e-18 66.5 0.0 2.1 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 CCF73002.1 - 3.7e-11 43.4 9.4 3.1e-07 30.5 0.1 4.0 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 CCF73002.1 - 1.1e-10 42.4 2.8 1.1e-10 42.4 2.8 7.5 2 2 3 6 6 4 1 AAA domain AAA_29 PF13555.6 CCF73002.1 - 2.6e-07 30.3 0.0 5.2e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 CCF73002.1 - 1.4e-06 28.3 22.4 1.4e-06 28.3 22.4 4.3 2 2 1 3 3 1 1 AAA ATPase domain Spc7 PF08317.11 CCF73002.1 - 0.0011 17.9 132.2 0.0069 15.3 20.0 7.3 2 2 4 7 7 7 6 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 CCF73002.1 - 0.0016 18.5 12.3 0.0016 18.5 12.3 8.4 3 3 6 9 9 9 2 TPR/MLP1/MLP2-like protein Laminin_II PF06009.12 CCF73002.1 - 0.0074 16.3 5.4 0.0074 16.3 5.4 8.9 4 2 7 11 11 11 3 Laminin Domain II DUF5624 PF18538.1 CCF73002.1 - 0.045 13.8 5.8 0.15 12.2 0.5 3.7 2 1 1 3 3 3 0 Domain of unknown function (DUF5624) HrpB7 PF09486.10 CCF73002.1 - 0.085 13.2 39.0 0.051 14.0 4.0 6.1 3 2 1 5 5 4 0 Bacterial type III secretion protein (HrpB7) ABC_tran PF00005.27 CCF73002.1 - 0.45 11.0 0.0 0.45 11.0 0.0 5.8 3 2 0 3 3 1 0 ABC transporter PIG-X PF08320.12 CCF73004.1 - 0.0006 19.8 0.3 0.0016 18.4 0.3 1.8 1 1 0 1 1 1 1 PIG-X / PBN1 MCM PF00493.23 CCF73006.1 - 7.5e-101 335.9 0.0 2.1e-100 334.4 0.0 1.7 2 0 0 2 2 2 1 MCM P-loop domain MCM_OB PF17207.3 CCF73006.1 - 8.1e-35 119.4 0.7 2.1e-34 118.1 0.7 1.7 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 CCF73006.1 - 3.7e-26 91.4 1.9 8.5e-26 90.2 1.9 1.7 1 0 0 1 1 1 1 MCM AAA-lid domain MCM6_C PF18263.1 CCF73006.1 - 3.3e-09 37.0 0.8 1e-08 35.3 0.8 1.9 1 0 0 1 1 1 1 MCM6 C-terminal winged-helix domain Mg_chelatase PF01078.21 CCF73006.1 - 8.8e-06 25.2 0.0 4.5e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CCF73006.1 - 0.00053 20.0 0.0 0.0016 18.4 0.0 1.9 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) MCM_N PF14551.6 CCF73006.1 - 0.0019 18.7 0.2 0.0062 17.1 0.2 1.9 1 0 0 1 1 1 1 MCM N-terminal domain TIP49_C PF17856.1 CCF73006.1 - 0.0049 17.0 0.2 0.014 15.5 0.2 1.7 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA_3 PF07726.11 CCF73006.1 - 0.032 14.1 0.0 0.088 12.7 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase_C PF13335.6 CCF73006.1 - 0.061 14.0 0.2 0.56 10.9 0.1 2.8 3 0 0 3 3 3 0 Magnesium chelatase, subunit ChlI C-terminal zf-ZPR1 PF03367.13 CCF73006.1 - 0.072 12.9 0.9 0.17 11.7 0.9 1.6 1 0 0 1 1 1 0 ZPR1 zinc-finger domain MutS_I PF01624.20 CCF73006.1 - 0.084 13.1 0.1 0.23 11.7 0.1 1.7 1 0 0 1 1 1 0 MutS domain I RAP PF08373.10 CCF73007.1 - 2.1e-18 66.1 0.8 2.1e-18 66.1 0.8 2.7 3 0 0 3 3 3 1 RAP domain MTES_1575 PF18741.1 CCF73007.1 - 0.0022 18.1 0.1 0.0096 16.1 0.1 2.0 1 1 0 1 1 1 1 REase_MTES_1575 zf-CCCH_7 PF18586.1 CCF73007.1 - 0.098 13.0 0.8 0.4 11.0 0.8 2.1 1 0 0 1 1 1 0 Chromatin remodeling factor Mit1 C-terminal Zn finger 1 SET PF00856.28 CCF73008.1 - 2.7e-13 50.7 1.7 9.3e-13 48.9 1.7 1.9 1 1 0 1 1 1 1 SET domain HUN PF08729.10 CCF73009.1 - 3.5e-06 26.9 6.7 3.5e-06 26.9 6.7 2.0 2 0 0 2 2 2 1 HPC2 and ubinuclein domain AMP-binding PF00501.28 CCF73011.1 - 1.4e-68 231.5 0.0 2.6e-68 230.6 0.0 1.4 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CCF73011.1 - 3.7e-05 24.6 0.0 8.6e-05 23.4 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Imm1 PF14430.6 CCF73011.1 - 0.25 12.0 0.1 7.1 7.3 0.0 2.3 2 0 0 2 2 2 0 Immunity protein Imm1 LSM PF01423.22 CCF73012.1 - 2.9e-17 62.1 0.1 3.6e-17 61.8 0.1 1.1 1 0 0 1 1 1 1 LSM domain DUF150_C PF17384.2 CCF73012.1 - 0.0055 16.8 0.2 0.014 15.5 0.1 1.8 1 1 0 1 1 1 1 RimP C-terminal SH3 domain YIF1 PF03878.15 CCF73013.1 - 1.3e-10 41.2 5.4 9e-06 25.4 0.4 2.3 2 1 0 2 2 2 2 YIF1 Helicase_C PF00271.31 CCF73014.1 - 0.056 13.8 0.1 0.16 12.3 0.1 1.8 1 0 0 1 1 1 0 Helicase conserved C-terminal domain DNA_pol_A_exo1 PF01612.20 CCF73015.1 - 2.3e-13 50.2 0.1 5.7e-13 48.9 0.1 1.7 1 1 0 1 1 1 1 3'-5' exonuclease zf-C2H2_2 PF12756.7 CCF73016.1 - 1.2e-19 70.5 6.8 1.1e-17 64.2 0.0 3.1 3 1 0 4 4 4 2 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 CCF73016.1 - 0.035 14.9 0.1 0.035 14.9 0.1 3.0 3 0 0 3 3 3 0 C2H2-type zinc finger IL12p40_C PF10420.9 CCF73016.1 - 0.036 14.6 0.2 0.079 13.5 0.2 1.7 1 0 0 1 1 1 0 Cytokine interleukin-12p40 C-terminus zf-C2H2 PF00096.26 CCF73016.1 - 0.054 14.0 0.2 0.054 14.0 0.2 2.5 2 0 0 2 2 2 0 Zinc finger, C2H2 type Coq4 PF05019.13 CCF73017.1 - 2.3e-51 174.2 0.0 1.1e-48 165.5 0.0 2.1 2 0 0 2 2 2 2 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 Peptidase_C1 PF00112.23 CCF73019.1 - 7.1e-55 186.5 8.5 1.1e-54 185.8 8.5 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 CCF73019.1 - 7.3e-11 42.4 4.7 2.4e-10 40.7 4.7 2.0 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 CCF73019.1 - 4.4e-06 25.7 0.4 4.4e-06 25.7 0.4 2.5 2 1 1 3 3 3 1 Peptidase C1-like family Renin_r PF07850.14 CCF73019.1 - 0.18 12.4 3.0 0.65 10.6 3.0 2.0 1 1 0 1 1 1 0 Renin receptor-like protein DnaJ_C PF01556.18 CCF73020.1 - 4e-35 121.1 0.0 5.5e-35 120.6 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CCF73020.1 - 4.5e-22 78.0 0.7 7.7e-22 77.2 0.7 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 CCF73020.1 - 6.4e-10 39.2 12.4 6.4e-10 39.2 12.4 2.0 2 0 0 2 2 2 1 DnaJ central domain Anti-TRAP PF15777.5 CCF73020.1 - 0.028 14.4 15.9 0.27 11.2 3.0 3.0 1 1 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein DUF1217 PF06748.12 CCF73020.1 - 0.033 14.3 0.3 0.34 10.9 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1217) Rep_fac-A_C PF08646.10 CCF73021.1 - 1.6e-32 112.3 0.1 4.4e-29 101.1 0.0 3.5 3 0 0 3 3 3 2 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 CCF73021.1 - 2.6e-26 91.4 4.6 1.5e-22 79.3 3.1 3.5 3 0 0 3 3 3 2 Replication protein A OB domain tRNA_anti-codon PF01336.25 CCF73021.1 - 4.5e-09 36.2 0.3 1e-06 28.6 0.0 3.5 2 1 2 4 4 4 1 OB-fold nucleic acid binding domain DUF4503 PF14951.6 CCF73021.1 - 0.00057 18.5 0.2 0.0012 17.4 0.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4503) ribosomal_L24 PF17136.4 CCF73022.1 - 4.3e-11 43.0 0.1 6.8e-11 42.4 0.1 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 CCF73022.1 - 2e-06 27.6 3.4 2e-06 27.6 3.4 1.7 2 0 0 2 2 2 1 KOW motif Mito_carr PF00153.27 CCF73023.1 - 6.8e-21 74.0 3.8 1.7e-08 34.3 0.0 3.2 2 1 1 3 3 3 3 Mitochondrial carrier protein VIT1 PF01988.19 CCF73024.1 - 1.8e-48 165.2 0.1 2.1e-48 165.0 0.1 1.0 1 0 0 1 1 1 1 VIT family LrgB PF04172.16 CCF73024.1 - 6.2 6.3 10.0 0.11 11.9 1.5 2.2 2 1 1 3 3 3 0 LrgB-like family RNA_pol_Rpb2_6 PF00562.28 CCF73026.1 - 4.7e-123 411.1 0.0 6.4e-123 410.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 CCF73026.1 - 3.1e-60 203.2 0.0 4.2e-60 202.7 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 CCF73026.1 - 7.1e-49 166.0 0.0 1.3e-48 165.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 CCF73026.1 - 1.2e-34 118.5 0.3 5.7e-34 116.4 0.2 2.2 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 CCF73026.1 - 2.4e-26 91.7 0.1 6.6e-26 90.3 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_4 PF04566.13 CCF73026.1 - 2.1e-19 69.6 0.1 5.4e-19 68.2 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 CCF73026.1 - 5.9e-17 62.0 3.3 1.4e-16 60.8 3.3 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 MRP-L47 PF06984.13 CCF73028.1 - 3.6e-20 71.9 1.2 1e-18 67.2 0.0 2.2 2 0 0 2 2 2 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Dynactin_p22 PF07426.11 CCF73028.1 - 0.015 15.1 5.0 0.023 14.6 5.0 1.3 1 0 0 1 1 1 0 Dynactin subunit p22 DUF489 PF04356.12 CCF73028.1 - 0.056 13.5 3.2 0.086 12.8 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF489) MACPF PF01823.19 CCF73029.1 - 7.6e-33 114.4 0.0 1.3e-32 113.6 0.0 1.4 1 0 0 1 1 1 1 MAC/Perforin domain MACPF PF01823.19 CCF73030.1 - 3.8e-19 69.6 0.0 8e-19 68.6 0.0 1.5 1 1 0 1 1 1 1 MAC/Perforin domain Qn_am_d_aIII PF09099.10 CCF73030.1 - 0.39 11.1 1.3 0.67 10.4 0.4 1.8 2 0 0 2 2 2 0 Quinohemoprotein amine dehydrogenase, alpha subunit domain III RNA_pol_Rpb2_6 PF00562.28 CCF73031.1 - 1.6e-105 353.4 0.0 2.4e-105 352.8 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 CCF73031.1 - 9.9e-30 103.6 0.0 1.6e-29 102.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 CCF73031.1 - 2.3e-25 88.5 0.0 6.2e-25 87.2 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_7 PF04560.20 CCF73031.1 - 3.5e-16 59.4 0.0 8.3e-16 58.2 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpa2_4 PF06883.12 CCF73031.1 - 0.0071 16.3 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase I, Rpa2 specific domain Adap_comp_sub PF00928.21 CCF73032.1 - 1.3e-05 24.7 1.1 1.3e-05 24.7 1.1 1.5 2 0 0 2 2 2 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 CCF73032.1 - 0.00012 22.1 4.2 0.00028 20.8 4.2 1.6 1 0 0 1 1 1 1 Clathrin adaptor complex small chain PLDc_2 PF13091.6 CCF73034.1 - 1.4e-34 118.8 0.0 6.6e-16 58.4 0.0 2.2 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 CCF73034.1 - 5.9e-10 38.9 1.9 6.4e-05 23.0 0.0 2.6 2 0 0 2 2 2 2 Phospholipase D Active site motif FAM83 PF07894.12 CCF73034.1 - 7.8e-05 22.4 0.0 0.023 14.3 0.0 2.2 2 0 0 2 2 2 2 FAM83 A-H PP_kinase_C_1 PF17941.1 CCF73034.1 - 0.031 13.8 0.0 0.077 12.5 0.0 1.6 1 0 0 1 1 1 0 Polyphosphate kinase C-terminal domain 1 Regulator_TrmB PF11495.8 CCF73034.1 - 0.039 13.1 0.0 2.6 7.2 0.0 2.2 2 0 0 2 2 2 0 Archaeal transcriptional regulator TrmB DUF1730 PF08331.10 CCF73034.1 - 0.056 13.4 0.1 0.26 11.2 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1730) Y_Y_Y PF07495.13 CCF73035.1 - 0.17 11.8 2.2 1.7 8.7 0.1 3.1 3 0 0 3 3 3 0 Y_Y_Y domain Spt5_N PF11942.8 CCF73035.1 - 2.3 9.2 8.9 5.6 8.0 8.9 1.6 1 0 0 1 1 1 0 Spt5 transcription elongation factor, acidic N-terminal DHHC PF01529.20 CCF73036.1 - 3.9e-35 120.9 15.9 3.9e-35 120.9 15.9 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase Slu7 PF11708.8 CCF73037.1 - 4.4e-74 249.6 11.7 4.4e-74 249.6 11.7 1.8 2 0 0 2 2 2 1 Pre-mRNA splicing Prp18-interacting factor zf-CCHC_4 PF14392.6 CCF73037.1 - 0.02 14.6 0.9 0.042 13.6 0.9 1.5 1 0 0 1 1 1 0 Zinc knuckle Ribosomal_L19 PF01245.20 CCF73038.1 - 7e-12 45.3 1.7 7e-12 45.3 0.1 1.8 2 0 0 2 2 2 1 Ribosomal protein L19 YceG PF02618.16 CCF73038.1 - 0.19 11.3 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 YceG-like family TPR_2 PF07719.17 CCF73039.1 - 2e-13 49.3 2.9 0.00051 20.0 0.0 7.4 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_11 PF13414.6 CCF73039.1 - 8.4e-11 41.4 2.5 0.0001 21.9 0.0 5.8 6 0 0 6 6 5 2 TPR repeat TPR_8 PF13181.6 CCF73039.1 - 5.8e-09 35.5 10.1 0.0051 16.9 0.1 7.0 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_19 PF14559.6 CCF73039.1 - 7.1e-08 32.8 5.8 0.021 15.3 0.0 6.2 4 3 2 6 6 6 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF73039.1 - 7.7e-08 32.5 4.1 0.054 13.8 0.0 5.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 CCF73039.1 - 6.6e-07 29.6 15.7 0.28 12.1 0.0 8.4 7 1 3 10 10 9 1 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73039.1 - 3.6e-06 26.6 1.5 2.7 8.0 0.0 6.0 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_9 PF13371.6 CCF73039.1 - 4.4e-06 26.7 0.2 0.00067 19.8 0.0 3.8 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 CCF73039.1 - 1.6e-05 25.3 0.7 1.8 9.4 0.0 5.1 5 1 0 5 5 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 CCF73039.1 - 0.0014 18.5 5.5 4.1 7.6 0.1 5.9 7 0 0 7 7 7 1 Tetratricopeptide repeat TPR_16 PF13432.6 CCF73039.1 - 0.0017 18.9 4.6 0.14 12.8 0.4 4.1 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_20 PF14561.6 CCF73039.1 - 0.003 17.8 2.6 8.5 6.8 0.0 5.0 4 1 1 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF73039.1 - 0.0032 17.7 4.7 0.0082 16.3 0.4 3.3 3 0 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 CCF73039.1 - 0.0033 17.7 0.7 4.9 7.8 0.1 4.6 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 CCF73039.1 - 0.078 12.9 0.4 15 5.6 0.0 4.9 7 0 0 7 7 6 0 Tetratricopeptide repeat Nuc_rec_co-act PF08815.10 CCF73039.1 - 2.6 8.0 4.5 3.3 7.6 1.9 2.4 2 0 0 2 2 2 0 Nuclear receptor coactivator Histone_H2A_C PF16211.5 CCF73040.1 - 2e-17 62.6 0.4 3.5e-17 61.8 0.4 1.4 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 CCF73040.1 - 9e-16 58.4 0.0 1.2e-15 58.0 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 CCF73040.1 - 0.00061 20.0 0.0 0.0011 19.2 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone DUF1931 PF09123.11 CCF73040.1 - 0.15 12.2 0.1 0.71 10.0 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF1931) L_biotic_typeA PF04604.13 CCF73040.1 - 0.22 11.4 0.6 0.59 10.0 0.1 1.8 2 0 0 2 2 2 0 Type-A lantibiotic Histone PF00125.24 CCF73041.1 - 2.3e-54 183.3 1.8 2.6e-54 183.1 1.8 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 CCF73041.1 - 0.00013 22.6 1.5 0.00016 22.3 1.5 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-T_C PF15511.6 CCF73041.1 - 0.00038 20.5 0.0 0.00073 19.6 0.0 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 CCF73041.1 - 0.00046 20.5 0.0 0.00069 20.0 0.0 1.2 1 0 0 1 1 1 1 CENP-S protein CBFD_NFYB_HMF PF00808.23 CCF73041.1 - 0.0064 16.8 0.5 0.01 16.1 0.0 1.5 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 CCF73041.1 - 0.016 15.3 0.1 0.027 14.5 0.0 1.5 2 0 0 2 2 2 0 Transcription initiation factor IID, 31kD subunit TMA7 PF09072.10 CCF73041.1 - 0.16 12.8 2.5 0.28 12.0 2.5 1.4 1 0 0 1 1 1 0 Translation machinery associated TMA7 PWI PF01480.17 CCF73042.1 - 1e-13 51.4 0.2 1e-13 51.4 0.2 2.7 3 0 0 3 3 3 1 PWI domain RRM_1 PF00076.22 CCF73042.1 - 6.9e-06 25.8 0.0 1.5e-05 24.7 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DASH_Ask1 PF08655.10 CCF73042.1 - 0.063 13.2 0.3 0.21 11.5 0.3 1.8 1 0 0 1 1 1 0 DASH complex subunit Ask1 Bestrophin PF01062.21 CCF73042.1 - 1.4 8.2 4.0 2.4 7.5 4.0 1.3 1 0 0 1 1 1 0 Bestrophin, RFP-TM, chloride channel CemA PF03040.14 CCF73042.1 - 4.7 7.1 9.5 11 5.9 9.5 1.6 1 0 0 1 1 1 0 CemA family RRM_1 PF00076.22 CCF73043.1 - 2e-19 69.2 0.1 3e-19 68.6 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 CCF73043.1 - 0.0082 16.1 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif DUF3416 PF11896.8 CCF73044.1 - 0.88 9.8 13.5 41 4.4 0.2 4.4 4 0 0 4 4 4 0 Domain of unknown function (DUF3416) Ribosomal_L22e PF01776.17 CCF73045.1 - 3.8e-44 149.5 3.3 4.5e-44 149.3 3.3 1.0 1 0 0 1 1 1 1 Ribosomal L22e protein family AdoMet_Synthase PF01941.19 CCF73045.1 - 0.017 14.0 0.2 0.019 13.8 0.2 1.1 1 0 0 1 1 1 0 S-adenosylmethionine synthetase (AdoMet synthetase) RPN7 PF10602.9 CCF73046.1 - 2.6e-52 177.0 3.5 4.2e-52 176.3 3.5 1.3 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 CCF73046.1 - 1.2e-09 38.6 0.1 3.9e-09 37.0 0.1 1.9 1 0 0 1 1 1 1 PCI domain PuR_N PF09182.10 CCF73046.1 - 0.021 14.7 0.0 0.12 12.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial purine repressor, N-terminal Remorin_C PF03763.13 CCF73046.1 - 2 8.3 4.4 3.2 7.7 0.5 2.2 2 0 0 2 2 2 0 Remorin, C-terminal region PCI PF01399.27 CCF73047.1 - 5.1e-10 39.8 2.1 6.6e-10 39.5 0.7 2.0 2 0 0 2 2 2 1 PCI domain Imm6 PF14434.6 CCF73047.1 - 0.022 14.7 2.7 0.051 13.5 0.2 2.7 3 0 0 3 3 3 0 Immunity protein Imm6 A_thal_3526 PF09713.10 CCF73047.1 - 1.5 9.1 6.5 0.67 10.2 0.4 3.4 3 0 0 3 3 3 0 Plant protein 1589 of unknown function (A_thal_3526) NOT2_3_5 PF04153.18 CCF73049.1 - 1.2e-15 57.8 4.2 1.7e-15 57.2 4.2 1.2 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family Symplekin_C PF12295.8 CCF73050.1 - 1.2e-28 100.4 2.0 3.7e-28 98.9 2.0 1.9 1 0 0 1 1 1 1 Symplekin tight junction protein C terminal Apocytochr_F_C PF01333.19 CCF73051.1 - 0.0095 16.0 0.8 0.023 14.7 0.0 2.0 2 0 0 2 2 2 1 Apocytochrome F, C-terminal TIL PF01826.17 CCF73051.1 - 1.2 9.5 9.6 2.4 8.5 9.6 1.6 1 0 0 1 1 1 0 Trypsin Inhibitor like cysteine rich domain RRM_1 PF00076.22 CCF73052.1 - 2.1e-58 194.0 13.3 1.5e-16 60.0 0.0 7.0 6 1 0 6 6 6 6 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF73052.1 - 1.5e-08 34.4 0.3 0.13 12.1 0.0 4.2 4 0 0 4 4 4 3 Occluded RNA-recognition motif RRM_5 PF13893.6 CCF73052.1 - 5.4e-05 22.8 0.0 0.00018 21.1 0.0 1.9 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 CCF73052.1 - 0.00012 22.0 0.0 5.4 7.1 0.0 3.6 3 0 0 3 3 3 2 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 CCF73052.1 - 0.00022 21.3 0.1 0.037 14.2 0.0 2.9 2 0 0 2 2 2 1 RNA recognition motif PHM7_cyt PF14703.6 CCF73052.1 - 0.003 17.8 3.9 1.7 8.8 0.6 4.9 2 2 0 3 3 3 1 Cytosolic domain of 10TM putative phosphate transporter Smg4_UPF3 PF03467.15 CCF73052.1 - 0.014 15.4 0.2 0.67 10.0 0.0 2.5 2 0 0 2 2 2 0 Smg-4/UPF3 family DUF1699 PF08004.11 CCF73052.1 - 0.019 14.6 0.1 5.7 6.6 0.0 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1699) TP6A_N PF04406.14 CCF73053.1 - 2.8e-10 40.0 0.7 5.3e-10 39.1 0.5 1.5 2 0 0 2 2 2 1 Type IIB DNA topoisomerase Myb_DNA-binding PF00249.31 CCF73055.1 - 2.5e-12 46.8 0.8 9.3e-05 22.5 0.0 3.0 3 0 0 3 3 3 2 Myb-like DNA-binding domain DnaJ PF00226.31 CCF73055.1 - 1.2e-10 41.3 0.7 8.2e-06 25.9 0.0 3.1 2 0 0 2 2 2 2 DnaJ domain Myb_DNA-bind_6 PF13921.6 CCF73055.1 - 0.001 19.3 3.2 1.4 9.3 0.0 4.1 3 1 0 3 3 3 2 Myb-like DNA-binding domain PBP_sp32 PF07222.12 CCF73055.1 - 1.7 8.1 6.6 4 6.8 6.6 1.6 1 0 0 1 1 1 0 Proacrosin binding protein sp32 Carb_kinase PF01256.17 CCF73056.1 - 2.1e-43 148.6 0.0 3e-43 148.0 0.0 1.2 1 0 0 1 1 1 1 Carbohydrate kinase Histone PF00125.24 CCF73057.1 - 1.4e-16 61.0 0.0 1.8e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 CCF73057.1 - 1.5e-05 25.1 0.0 2.8e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 CCF73057.1 - 0.0013 19.2 0.0 0.0018 18.7 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A SMC_N PF02463.19 CCF73059.1 - 2e-65 220.3 0.0 1.2e-64 217.8 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 CCF73059.1 - 6e-14 52.4 0.3 2.6e-13 50.3 0.0 2.2 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain AAA_15 PF13175.6 CCF73059.1 - 8.6e-12 45.4 16.8 8.6e-12 45.4 16.8 4.2 2 2 0 2 2 1 1 AAA ATPase domain AAA_21 PF13304.6 CCF73059.1 - 3.5e-06 27.0 24.1 0.00029 20.7 0.7 4.4 4 2 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system Spc7 PF08317.11 CCF73059.1 - 0.00071 18.5 21.4 0.00071 18.5 21.4 6.1 2 2 3 5 5 4 2 Spc7 kinetochore protein AAA_29 PF13555.6 CCF73059.1 - 0.0023 17.6 0.0 0.0053 16.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain Filament PF00038.21 CCF73059.1 - 0.0034 17.0 6.2 0.0034 17.0 6.2 5.7 2 2 2 5 5 4 2 Intermediate filament protein DUF641 PF04859.12 CCF73059.1 - 0.01 16.2 5.7 0.01 16.2 5.7 7.8 4 2 4 8 8 7 0 Plant protein of unknown function (DUF641) MscS_porin PF12795.7 CCF73059.1 - 0.027 14.0 87.9 0.11 12.0 6.3 6.0 3 2 2 6 6 6 0 Mechanosensitive ion channel porin domain HATPase_c PF02518.26 CCF73059.1 - 0.12 12.9 0.1 0.35 11.4 0.1 1.8 1 0 0 1 1 1 0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LacI PF00356.21 CCF73059.1 - 0.16 11.8 0.1 0.56 10.0 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, lacI family AAA_13 PF13166.6 CCF73059.1 - 0.42 9.2 94.5 0.0046 15.7 21.0 5.4 3 2 4 7 7 7 0 AAA domain AAA_23 PF13476.6 CCF73059.1 - 0.65 10.5 111.4 0.079 13.4 47.6 7.1 2 2 1 3 3 1 0 AAA domain Fez1 PF06818.15 CCF73059.1 - 0.67 10.4 90.9 0.92 9.9 20.2 5.7 2 2 2 4 4 4 0 Fez1 DUF948 PF06103.11 CCF73059.1 - 1.6 9.1 39.0 3.4 8.0 0.3 7.5 6 1 0 6 6 6 0 Bacterial protein of unknown function (DUF948) APG6_N PF17675.1 CCF73059.1 - 4.1 8.0 115.9 0.12 12.9 18.4 7.3 3 2 4 7 7 7 0 Apg6 coiled-coil region ATG16 PF08614.11 CCF73059.1 - 4.5 7.4 90.3 0.46 10.7 20.1 5.7 3 2 3 6 6 6 0 Autophagy protein 16 (ATG16) Baculo_PEP_C PF04513.12 CCF73059.1 - 5.3 7.1 57.1 0.066 13.3 5.1 7.7 3 2 5 9 9 8 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3584 PF12128.8 CCF73059.1 - 6.3 4.2 90.0 0.22 9.0 23.6 3.5 2 2 1 3 3 3 0 Protein of unknown function (DUF3584) DTC PF18102.1 CCF73060.1 - 7.2e-21 74.7 0.0 1.9e-20 73.4 0.0 1.7 1 0 0 1 1 1 1 Deltex C-terminal domain zf-RING_2 PF13639.6 CCF73060.1 - 8.4e-07 29.2 6.3 1.7e-06 28.2 6.3 1.6 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 CCF73060.1 - 4.9e-05 23.5 4.6 0.0001 22.5 3.9 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 CCF73060.1 - 0.0001 22.1 7.5 0.00023 20.9 7.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF73060.1 - 0.00026 20.8 7.2 0.00084 19.1 7.2 1.9 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 CCF73060.1 - 0.0022 17.7 2.4 0.0055 16.4 2.4 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 CCF73060.1 - 0.0066 16.4 6.5 0.012 15.5 6.5 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 CCF73060.1 - 0.011 15.7 2.8 0.043 13.9 2.5 2.1 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 CCF73060.1 - 0.02 14.9 6.4 0.02 14.9 6.4 2.1 2 0 0 2 2 2 0 RING-type zinc-finger PHD PF00628.29 CCF73060.1 - 0.27 11.1 6.8 0.33 10.9 5.4 1.8 1 1 1 2 2 2 0 PHD-finger zf-C3HC4_4 PF15227.6 CCF73060.1 - 1.1 9.5 9.8 0.44 10.8 7.4 1.7 2 0 0 2 2 1 0 zinc finger of C3HC4-type, RING Prok-RING_1 PF14446.6 CCF73060.1 - 2.1 8.3 8.3 7.9 6.5 8.3 2.0 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-Di19 PF05605.12 CCF73060.1 - 5.3 7.4 9.3 7.5 6.9 1.7 2.4 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Dpy19 PF10034.9 CCF73061.1 - 1.7e-66 224.8 36.8 3.1e-41 141.4 31.3 2.0 1 1 1 2 2 2 2 Q-cell neuroblast polarisation Plasmid_parti PF01672.16 CCF73061.1 - 0.073 13.7 0.3 0.24 12.1 0.3 1.9 1 0 0 1 1 1 0 Putative plasmid partition protein C2 PF00168.30 CCF73062.1 - 2.6e-24 85.5 0.6 6e-06 26.5 0.0 6.6 7 0 0 7 7 7 5 C2 domain FerI PF08151.12 CCF73062.1 - 0.048 13.8 0.0 0.17 12.0 0.0 1.9 1 0 0 1 1 1 0 FerI (NUC094) domain DnaJ-X PF14308.6 CCF73063.1 - 2.9e-27 95.5 0.6 2.2e-26 92.6 0.5 2.2 2 1 0 2 2 2 1 X-domain of DnaJ-containing DnaJ PF00226.31 CCF73063.1 - 5.5e-25 87.3 1.6 1.4e-24 85.9 1.6 1.8 1 0 0 1 1 1 1 DnaJ domain LUC7 PF03194.15 CCF73064.1 - 7.7e-69 232.1 0.6 1.2e-68 231.6 0.6 1.3 1 0 0 1 1 1 1 LUC7 N_terminus rRNA_proc-arch PF13234.6 CCF73065.1 - 1.7e-50 172.5 0.7 2.8e-50 171.7 0.7 1.4 1 0 0 1 1 1 1 rRNA-processing arch domain DSHCT PF08148.12 CCF73065.1 - 1.3e-44 151.8 0.0 2.4e-44 150.9 0.0 1.5 1 0 0 1 1 1 1 DSHCT (NUC185) domain DEAD PF00270.29 CCF73065.1 - 7.1e-18 65.0 0.1 5e-17 62.2 0.1 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73065.1 - 1.2e-08 35.2 0.2 4.2e-07 30.3 0.2 2.8 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF73065.1 - 0.00013 22.0 0.1 0.00042 20.3 0.1 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Cbl_N2 PF02761.14 CCF73065.1 - 0.2 12.4 3.6 6.9 7.5 0.1 3.1 3 0 0 3 3 3 0 CBL proto-oncogene N-terminus, EF hand-like domain MAT1 PF06391.13 CCF73069.1 - 6e-10 39.3 9.9 9.7e-10 38.6 9.9 1.2 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 zf-RING_5 PF14634.6 CCF73069.1 - 0.00056 19.8 11.3 0.0023 17.9 11.3 2.1 1 1 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 CCF73069.1 - 0.0021 18.0 7.7 0.0021 18.0 7.7 2.2 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 CCF73069.1 - 0.0028 17.9 10.8 0.032 14.6 7.4 2.5 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 CCF73069.1 - 0.018 14.8 6.8 0.52 10.1 4.5 2.6 2 0 0 2 2 2 0 RING-like zinc finger zf-C3HC4 PF00097.25 CCF73069.1 - 0.028 14.3 11.3 0.11 12.3 7.5 2.6 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) FTA4 PF13093.6 CCF73069.1 - 0.042 13.7 1.9 0.07 13.0 1.9 1.3 1 0 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 Prok-RING_4 PF14447.6 CCF73069.1 - 0.047 13.6 12.0 7.4 6.5 10.0 3.6 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 zf-UDP PF14569.6 CCF73069.1 - 3.7 7.7 7.5 4.2 7.6 5.3 2.1 2 0 0 2 2 2 0 Zinc-binding RING-finger zf-C3HC4_5 PF17121.5 CCF73069.1 - 4.6 7.2 8.6 4.2 7.3 5.7 2.3 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF73069.1 - 4.7 7.1 13.4 4.1 7.3 9.6 2.6 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) DUF1390 PF07150.11 CCF73069.1 - 4.8 6.8 10.6 54 3.4 10.6 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1390) SKIP_SNW PF02731.15 CCF73071.1 - 2.4e-67 225.6 7.0 4.4e-67 224.7 7.0 1.4 1 0 0 1 1 1 1 SKIP/SNW domain DEAD PF00270.29 CCF73072.1 - 3.9e-42 144.0 0.0 8.9e-42 142.8 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73072.1 - 5e-21 75.1 0.2 1.6e-20 73.5 0.2 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 CCF73072.1 - 7.7e-08 32.5 0.0 2.5e-07 30.8 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4217) ResIII PF04851.15 CCF73072.1 - 4.2e-07 30.1 0.0 8.9e-07 29.1 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CCF73072.1 - 0.0048 16.1 0.1 0.0076 15.5 0.1 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase CMS1 PF14617.6 CCF73072.1 - 0.028 13.8 0.3 0.074 12.4 0.0 1.7 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit Helicase_C_2 PF13307.6 CCF73072.1 - 0.056 13.6 0.0 0.11 12.7 0.0 1.4 1 0 0 1 1 1 0 Helicase C-terminal domain AP2 PF00847.20 CCF73073.1 - 1.4e-05 25.3 0.3 2.6e-05 24.4 0.3 1.4 1 0 0 1 1 1 1 AP2 domain zf-BED PF02892.15 CCF73073.1 - 0.038 14.0 1.6 0.079 13.0 0.5 2.2 2 0 0 2 2 2 0 BED zinc finger NinE PF05322.11 CCF73073.1 - 0.087 12.7 0.5 0.26 11.2 0.5 1.8 1 0 0 1 1 1 0 NINE Protein PIF1 PF05970.14 CCF73073.1 - 0.37 9.9 1.3 0.57 9.3 1.3 1.2 1 0 0 1 1 1 0 PIF1-like helicase Golgin_A5 PF09787.9 CCF73076.1 - 0.6 9.5 22.5 0.78 9.1 22.5 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 FAM193_C PF15914.5 CCF73078.1 - 0.0079 15.9 0.4 0.4 10.5 0.1 2.6 2 0 0 2 2 2 1 FAM193 family C-terminal Use1 PF09753.9 CCF73078.1 - 0.065 13.0 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 Membrane fusion protein Use1 cNMP_binding PF00027.29 CCF73079.1 - 4.8e-39 132.3 0.1 9.6e-22 76.9 0.0 2.2 2 0 0 2 2 2 2 Cyclic nucleotide-binding domain Solute_trans_a PF03619.16 CCF73080.1 - 6.2e-53 180.0 26.8 8.4e-53 179.6 26.8 1.2 1 0 0 1 1 1 1 Organic solute transporter Ostalpha TraS PF10624.9 CCF73080.1 - 5.1 7.0 8.0 0.78 9.6 0.4 2.5 2 0 0 2 2 2 0 Plasmid conjugative transfer entry exclusion protein TraS CDH PF02611.15 CCF73082.1 - 0.00052 19.7 0.8 0.00095 18.8 0.8 1.4 1 0 0 1 1 1 1 CDP-diacylglycerol pyrophosphatase MPS2 PF17060.5 CCF73082.1 - 0.00073 18.9 5.8 0.0013 18.0 5.8 1.5 1 0 0 1 1 1 1 Monopolar spindle protein 2 GIT_CC PF16559.5 CCF73082.1 - 0.019 14.8 0.6 0.07 13.0 0.6 2.0 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor PKcGMP_CC PF16808.5 CCF73082.1 - 0.021 14.7 0.9 3.1 7.7 0.1 3.6 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase APC_N_CC PF16689.5 CCF73082.1 - 0.084 12.9 7.2 0.61 10.2 1.8 3.4 3 0 0 3 3 3 0 Coiled-coil N-terminus of APC, dimerisation domain Golgin_A5 PF09787.9 CCF73082.1 - 0.11 12.0 10.4 1.4 8.3 0.5 2.3 1 1 1 2 2 2 0 Golgin subfamily A member 5 LRRFIP PF09738.9 CCF73082.1 - 0.14 11.6 8.9 0.29 10.6 8.9 1.5 1 0 0 1 1 1 0 LRRFIP family Fez1 PF06818.15 CCF73082.1 - 0.34 11.3 11.0 0.53 10.7 9.2 2.1 1 1 0 1 1 1 0 Fez1 SlyX PF04102.12 CCF73082.1 - 1.7 9.3 5.7 0.6 10.8 0.8 2.9 3 1 1 4 4 4 0 SlyX CC2-LZ PF16516.5 CCF73082.1 - 3.3 8.1 10.1 4.1 7.8 1.4 3.2 1 1 2 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Sec63 PF02889.16 CCF73083.1 - 1.7e-23 83.1 0.4 2.3e-23 82.7 0.4 1.1 1 0 0 1 1 1 1 Sec63 Brl domain DnaJ PF00226.31 CCF73083.1 - 8.3e-19 67.5 0.5 1.9e-18 66.3 0.5 1.6 1 0 0 1 1 1 1 DnaJ domain TssO PF17561.2 CCF73083.1 - 0.16 12.1 2.0 0.27 11.3 0.4 2.2 2 0 0 2 2 2 0 Type VI secretion system, TssO MINDY_DUB PF04424.13 CCF73084.1 - 8.6e-21 74.1 0.2 1.7e-20 73.1 0.2 1.5 1 0 0 1 1 1 1 MINDY deubiquitinase PA28_beta PF02252.18 CCF73086.1 - 2.8e-56 189.2 2.0 3.8e-56 188.8 2.0 1.2 1 0 0 1 1 1 1 Proteasome activator pa28 beta subunit PA28_alpha PF02251.18 CCF73086.1 - 0.01 15.9 1.0 0.021 14.9 0.1 2.0 2 0 0 2 2 2 0 Proteasome activator pa28 alpha subunit PhoU PF01895.19 CCF73086.1 - 0.024 15.1 0.6 5 7.7 0.3 2.4 2 0 0 2 2 2 0 PhoU domain DUF5621 PF18532.1 CCF73086.1 - 0.058 13.3 0.1 4.5 7.2 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF5621) CTP_synth_N PF06418.14 CCF73087.1 - 6.5e-119 396.1 0.4 8.9e-119 395.7 0.4 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 CCF73087.1 - 2.6e-47 161.1 0.0 4.5e-47 160.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 CCF73087.1 - 2e-05 24.5 0.2 0.0013 18.6 0.1 2.9 2 1 0 2 2 2 1 Peptidase C26 DNA_primase_S PF01896.19 CCF73088.1 - 1.1e-45 155.8 0.7 1.6e-45 155.3 0.7 1.2 1 0 0 1 1 1 1 DNA primase small subunit SSB PF00436.25 CCF73089.1 - 2.3e-19 69.4 0.3 3.7e-19 68.7 0.3 1.3 1 0 0 1 1 1 1 Single-strand binding protein family SAS-6_N PF16531.5 CCF73090.1 - 4.8e-19 68.7 4.1 4.8e-19 68.7 4.1 1.7 2 0 0 2 2 2 1 Centriolar protein SAS N-terminal Arf PF00025.21 CCF73091.1 - 1.1e-17 64.0 0.0 4.3e-13 49.1 0.0 2.1 2 0 0 2 2 2 2 ADP-ribosylation factor family G-alpha PF00503.20 CCF73091.1 - 0.0084 15.3 0.1 0.01 15.0 0.1 1.2 1 0 0 1 1 1 1 G-protein alpha subunit MMR_HSR1 PF01926.23 CCF73091.1 - 0.047 13.8 0.1 0.22 11.6 0.1 2.0 1 1 0 1 1 1 0 50S ribosome-binding GTPase SRPRB PF09439.10 CCF73091.1 - 0.066 12.6 0.2 2.2 7.7 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 CCF73091.1 - 0.18 12.2 0.0 1.1 9.6 0.0 2.0 1 1 0 1 1 1 0 AAA ATPase domain AAA_15 PF13175.6 CCF73091.1 - 0.56 9.8 6.0 1.2 8.8 6.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain Xpo1 PF08389.12 CCF73092.1 - 1.8e-13 50.8 6.6 1.8e-13 50.8 6.6 3.8 3 1 0 3 3 3 1 Exportin 1-like protein Myb_DNA-binding PF00249.31 CCF73093.1 - 7e-19 67.8 5.7 1.3e-10 41.3 1.2 3.5 3 0 0 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF73093.1 - 2e-10 40.8 8.3 9e-07 29.0 0.2 4.5 3 2 2 5 5 5 2 Myb-like DNA-binding domain HTH_AsnC-type PF13404.6 CCF73093.1 - 0.00025 20.8 0.0 0.2 11.5 0.0 3.4 4 0 0 4 4 4 2 AsnC-type helix-turn-helix domain DUF722 PF05263.11 CCF73093.1 - 0.0062 16.8 1.4 2.3 8.4 0.0 3.3 3 0 0 3 3 3 2 Protein of unknown function (DUF722) MADF_DNA_bdg PF10545.9 CCF73093.1 - 0.1 12.9 9.8 0.17 12.3 0.2 4.1 3 1 0 3 3 3 0 Alcohol dehydrogenase transcription factor Myb/SANT-like Myb_DNA-bind_4 PF13837.6 CCF73093.1 - 2.4 8.6 12.5 0.18 12.2 1.2 4.3 6 1 0 6 6 6 0 Myb/SANT-like DNA-binding domain GCD14 PF08704.10 CCF73094.1 - 1.2e-54 185.6 0.1 4.2e-54 183.8 0.0 1.7 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 CCF73094.1 - 0.00079 19.2 0.0 0.0012 18.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CCF73094.1 - 0.0098 15.7 0.0 0.016 15.0 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CDP-OH_P_transf PF01066.21 CCF73095.1 - 6.1e-10 39.7 0.2 1.9e-09 38.1 0.2 1.9 1 0 0 1 1 1 1 CDP-alcohol phosphatidyltransferase SNAP PF14938.6 CCF73096.1 - 2.6e-60 204.2 10.8 3.3e-60 203.9 10.8 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP TPR_12 PF13424.6 CCF73096.1 - 0.0002 21.6 1.2 1 9.7 0.0 3.2 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF73096.1 - 0.00037 20.5 7.2 1.4 9.4 1.1 5.3 5 1 1 6 6 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 CCF73096.1 - 0.00095 19.0 0.3 0.086 12.9 0.0 3.5 3 1 1 4 4 4 1 Tetratricopeptide repeat DHR-2 PF06920.13 CCF73096.1 - 0.0018 17.0 1.1 0.0031 16.2 0.5 1.7 1 1 0 1 1 1 1 Dock homology region 2 TPR_1 PF00515.28 CCF73096.1 - 0.0061 16.3 6.7 0.0062 16.3 1.3 3.7 5 0 0 5 5 5 1 Tetratricopeptide repeat MIT PF04212.18 CCF73096.1 - 0.008 16.2 4.5 0.6 10.2 2.7 3.6 3 1 1 4 4 4 1 MIT (microtubule interacting and transport) domain tRNA-synt_2b PF00587.25 CCF73096.1 - 0.0089 16.0 0.4 0.015 15.3 0.4 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) TPR_2 PF07719.17 CCF73096.1 - 0.013 15.5 4.6 0.99 9.7 0.3 5.0 6 0 0 6 6 6 0 Tetratricopeptide repeat ARL2_Bind_BART PF11527.8 CCF73096.1 - 0.024 14.8 5.3 0.054 13.6 3.0 2.6 2 1 0 2 2 2 0 The ARF-like 2 binding protein BART TPR_6 PF13174.6 CCF73096.1 - 0.15 12.7 2.4 41 5.1 0.0 4.8 3 2 1 4 4 4 0 Tetratricopeptide repeat DALR_1 PF05746.15 CCF73096.1 - 0.28 11.4 1.4 0.67 10.1 0.2 2.0 2 0 0 2 2 2 0 DALR anticodon binding domain FF PF01846.19 CCF73097.1 - 5.1e-20 71.4 14.0 1.9e-08 34.3 0.3 5.6 6 0 0 6 6 6 4 FF domain WW PF00397.26 CCF73097.1 - 8.9e-18 64.1 14.6 2e-09 37.4 3.3 2.7 2 0 0 2 2 2 2 WW domain RhoGAP-FF1 PF16512.5 CCF73097.1 - 0.0093 16.6 5.8 0.14 12.8 0.1 3.0 2 0 0 2 2 2 1 p190-A and -B Rho GAPs FF domain DUF1957 PF09210.11 CCF73097.1 - 2.6 8.5 11.0 0.71 10.3 2.8 3.1 2 1 1 3 3 3 0 Domain of unknown function (DUF1957) CTP_transf_like PF01467.26 CCF73098.1 - 6.8e-58 194.9 0.6 1.9e-32 112.5 0.0 2.9 2 1 0 2 2 2 2 Cytidylyltransferase-like FAD_syn PF06574.12 CCF73098.1 - 0.016 15.1 0.0 3.6 7.5 0.0 2.7 2 0 0 2 2 2 0 FAD synthetase DUF5639 PF18690.1 CCF73098.1 - 0.2 11.8 0.0 13 6.0 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5639) Sec20 PF03908.13 CCF73099.1 - 0.00012 21.9 2.1 0.00012 21.9 2.1 1.8 2 0 0 2 2 2 1 Sec20 CCDC-167 PF15188.6 CCF73099.1 - 0.0018 18.6 0.5 0.64 10.4 0.4 2.4 2 0 0 2 2 2 2 Coiled-coil domain-containing protein 167 Sin3_corepress PF08295.12 CCF73099.1 - 0.029 14.4 0.6 0.064 13.3 0.6 1.5 1 0 0 1 1 1 0 Sin3 family co-repressor Leu_zip PF15294.6 CCF73099.1 - 0.033 13.7 3.0 0.045 13.3 3.0 1.2 1 0 0 1 1 1 0 Leucine zipper BORCS7 PF16088.5 CCF73099.1 - 0.039 14.2 3.6 0.17 12.2 3.6 2.0 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 7 KH_9 PF17904.1 CCF73099.1 - 0.18 12.2 2.0 1.6 9.1 2.1 2.2 1 1 0 1 1 1 0 FMRP KH0 domain BRE1 PF08647.11 CCF73099.1 - 0.72 10.0 8.4 0.76 9.9 5.4 2.3 2 1 0 2 2 2 0 BRE1 E3 ubiquitin ligase DUF5396 PF17374.2 CCF73101.1 - 0.055 11.3 0.0 0.055 11.3 0.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5396) TerB PF05099.13 CCF73102.1 - 0.0073 16.3 0.1 0.075 13.0 0.0 2.1 2 0 0 2 2 2 1 Tellurite resistance protein TerB EPL1 PF10513.9 CCF73102.1 - 0.0078 16.6 3.6 0.01 16.2 0.8 2.2 2 0 0 2 2 2 1 Enhancer of polycomb-like UCH PF00443.29 CCF73104.1 - 1.5e-33 116.4 0.8 1.7e-33 116.2 0.2 1.4 2 0 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 CCF73104.1 - 4.2e-12 46.2 1.8 1.1e-11 44.9 1.8 1.7 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein RRM_1 PF00076.22 CCF73105.1 - 5.4e-05 22.9 0.0 0.00011 22.0 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MCM PF00493.23 CCF73106.1 - 1.9e-94 314.9 0.0 2.8e-94 314.4 0.0 1.2 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 CCF73106.1 - 3.9e-27 94.6 0.1 8.4e-27 93.5 0.1 1.5 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 CCF73106.1 - 7.9e-25 87.1 0.3 1.8e-24 86.0 0.3 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 CCF73106.1 - 1.2e-09 38.7 0.3 3.4e-09 37.2 0.3 1.8 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 CCF73106.1 - 6.5e-07 28.9 0.0 1.6e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CCF73106.1 - 0.0014 18.7 0.0 0.0077 16.2 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 CCF73106.1 - 0.0017 18.2 0.0 0.0046 16.8 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TIP49_C PF17856.1 CCF73106.1 - 0.082 13.1 0.0 0.36 11.0 0.0 2.1 1 0 0 1 1 1 0 TIP49 AAA-lid domain Sigma54_activat PF00158.26 CCF73106.1 - 0.099 12.3 0.0 6.4 6.4 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain DUF3295 PF11702.8 CCF73109.1 - 0.063 12.6 5.2 0.078 12.3 5.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) PUB PF09409.10 CCF73109.1 - 0.085 12.8 0.1 0.17 11.9 0.1 1.5 1 0 0 1 1 1 0 PUB domain FAM176 PF14851.6 CCF73109.1 - 5.1 6.8 6.7 9.3 5.9 6.5 1.5 1 1 1 2 2 2 0 FAM176 family CBF PF03914.17 CCF73110.1 - 4.1e-12 46.5 0.1 1.3e-11 44.8 0.1 1.8 1 1 0 1 1 1 1 CBF/Mak21 family Ctr PF04145.15 CCF73112.1 - 1.4e-06 29.0 15.4 2.7e-06 28.1 8.2 4.2 2 2 1 3 3 3 2 Ctr copper transporter family DUF1284 PF06935.11 CCF73112.1 - 0.47 10.9 14.2 0.46 11.0 8.8 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1284) MazG PF03819.17 CCF73112.1 - 0.6 10.3 3.8 23 5.3 0.1 2.9 3 0 0 3 3 3 0 MazG nucleotide pyrophosphohydrolase domain Ribosomal_S19 PF00203.21 CCF73113.1 - 2.3e-33 113.9 0.3 3.2e-33 113.4 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Fer2 PF00111.27 CCF73114.1 - 2.9e-16 59.2 0.9 4.5e-16 58.6 0.9 1.3 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MLANA PF14991.6 CCF73114.1 - 0.18 12.1 0.3 0.52 10.6 0.1 1.8 2 1 1 3 3 3 0 Protein melan-A TPR_2 PF07719.17 CCF73115.1 - 8.2e-07 28.7 5.6 7.9e-05 22.5 0.0 3.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73115.1 - 1.7e-06 27.6 5.5 3.1e-05 23.6 0.0 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_17 PF13431.6 CCF73115.1 - 7.4e-06 26.0 0.5 0.63 10.5 0.0 4.8 4 1 0 4 4 4 1 Tetratricopeptide repeat RPN7 PF10602.9 CCF73115.1 - 0.00029 20.6 0.6 0.84 9.3 0.0 2.8 3 0 0 3 3 3 2 26S proteasome subunit RPN7 TPR_8 PF13181.6 CCF73115.1 - 0.00039 20.4 4.6 0.0079 16.3 0.0 3.6 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 CCF73115.1 - 0.00057 20.3 0.0 0.92 10.1 0.0 4.1 4 1 0 5 5 5 1 Tetratricopeptide repeat TPR_11 PF13414.6 CCF73115.1 - 0.00072 19.2 1.0 0.0033 17.1 0.0 2.4 2 0 0 2 2 2 1 TPR repeat TPR_14 PF13428.6 CCF73115.1 - 0.0092 16.7 0.0 3.9 8.6 0.0 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF73115.1 - 0.022 15.0 0.0 4.8 7.5 0.0 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 CCF73115.1 - 0.024 15.2 1.5 26 5.7 0.0 3.9 4 1 0 4 4 4 0 Tetratricopeptide repeat CTP_transf_1 PF01148.20 CCF73116.1 - 1.5e-56 192.1 19.6 1.9e-53 181.9 12.0 2.1 2 0 0 2 2 2 2 Cytidylyltransferase family Ribosomal_L16 PF00252.18 CCF73118.1 - 4.6e-19 68.7 0.0 5.7e-19 68.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e SHNi-TPR PF10516.9 CCF73118.1 - 0.084 12.3 0.1 0.61 9.6 0.1 2.1 2 0 0 2 2 2 0 SHNi-TPR EAP30 PF04157.16 CCF73119.1 - 6e-26 91.2 0.0 6.9e-26 91.0 0.0 1.0 1 0 0 1 1 1 1 EAP30/Vps36 family Pre-PUA PF17832.1 CCF73120.1 - 3.9e-17 62.7 0.2 1.2e-16 61.1 0.2 1.7 1 1 0 1 1 1 1 Pre-PUA-like domain PUA PF01472.20 CCF73120.1 - 3.1e-15 55.9 0.1 4.6e-15 55.3 0.1 1.3 1 0 0 1 1 1 1 PUA domain Tic22 PF04278.12 CCF73122.1 - 0.00076 18.9 0.0 0.29 10.5 0.0 2.2 2 0 0 2 2 2 2 Tic22-like family DUF3496 PF12001.8 CCF73122.1 - 0.26 11.7 2.1 0.75 10.2 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3496) TraF PF13728.6 CCF73123.1 - 0.027 14.3 0.0 0.034 14.0 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein DUF836 PF05768.14 CCF73123.1 - 0.042 14.3 0.1 0.09 13.2 0.0 1.6 2 0 0 2 2 2 0 Glutaredoxin-like domain (DUF836) Thioredoxin_7 PF13899.6 CCF73123.1 - 0.054 13.7 0.0 0.091 13.0 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like Thioredoxin_2 PF13098.6 CCF73123.1 - 0.082 13.4 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain Glutaredoxin PF00462.24 CCF73123.1 - 0.1 12.8 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Glutaredoxin VCBS PF13517.6 CCF73124.1 - 9e-14 51.8 12.4 0.00036 21.1 0.2 4.8 4 2 0 4 4 4 3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FG-GAP PF01839.23 CCF73124.1 - 0.00019 21.5 11.9 0.031 14.4 0.1 4.5 4 0 0 4 4 4 2 FG-GAP repeat Dockerin_1 PF00404.18 CCF73124.1 - 0.0011 19.2 3.2 0.71 10.1 0.0 4.3 5 0 0 5 5 5 2 Dockerin type I domain TcdB_toxin_midN PF12256.8 CCF73124.1 - 0.086 12.2 0.2 56 3.0 0.0 3.4 2 1 0 3 3 3 0 Insecticide toxin TcdB middle/N-terminal region MMR_HSR1 PF01926.23 CCF73125.1 - 1.3e-15 57.4 0.2 1e-11 44.9 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF73125.1 - 2.4e-10 40.1 1.4 6.1e-06 25.9 0.1 2.4 2 0 0 2 2 2 2 Ferrous iron transport protein B RsgA_GTPase PF03193.16 CCF73125.1 - 6.4e-10 39.2 0.6 2.2e-06 27.7 0.3 2.6 1 1 0 2 2 2 2 RsgA GTPase GN3L_Grn1 PF08701.11 CCF73125.1 - 2.8e-08 33.7 9.7 4.6e-08 33.1 9.7 1.3 1 0 0 1 1 1 1 GNL3L/Grn1 putative GTPase GTP_EFTU PF00009.27 CCF73125.1 - 6.5e-05 22.6 0.0 0.00076 19.1 0.0 2.3 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain cobW PF02492.19 CCF73125.1 - 0.00011 21.9 0.1 0.0076 15.9 0.0 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 CCF73125.1 - 0.0029 18.0 0.2 0.011 16.1 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 CCF73125.1 - 0.0043 17.6 0.2 0.017 15.7 0.0 2.1 2 1 0 2 2 2 1 AAA domain Roc PF08477.13 CCF73125.1 - 0.0062 16.7 0.2 0.57 10.4 0.0 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 CCF73125.1 - 0.029 14.5 6.6 1.1 9.3 0.2 3.1 3 1 0 3 3 3 0 Dynamin family ABC_tran PF00005.27 CCF73125.1 - 0.056 14.0 0.2 0.4 11.2 0.0 2.2 2 0 0 2 2 2 0 ABC transporter AAA PF00004.29 CCF73125.1 - 0.12 12.8 0.9 1 9.8 0.0 2.6 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AhpC-TSA PF00578.21 CCF73126.1 - 2.2e-31 108.4 0.0 2.7e-31 108.1 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CCF73126.1 - 4e-14 52.6 0.0 4.9e-14 52.3 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 CCF73126.1 - 4.2e-10 39.3 0.0 7.7e-10 38.5 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin RRM_1 PF00076.22 CCF73127.1 - 4.7e-22 77.6 0.2 2.7e-14 52.8 0.0 3.5 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF73127.1 - 0.0003 20.6 0.2 0.02 14.8 0.0 2.9 4 0 0 4 4 4 1 Occluded RNA-recognition motif RRM_5 PF13893.6 CCF73127.1 - 0.012 15.2 0.0 0.022 14.3 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHD PF00628.29 CCF73128.1 - 7.3e-12 45.0 36.9 8.1e-08 32.0 11.4 4.4 1 1 2 3 3 3 2 PHD-finger PHD_2 PF13831.6 CCF73128.1 - 0.019 14.5 5.6 0.019 14.5 5.6 5.7 7 0 0 7 7 7 0 PHD-finger Adenylsucc_synt PF00709.21 CCF73129.1 - 2.7e-139 464.7 0.0 3.1e-139 464.5 0.0 1.0 1 0 0 1 1 1 1 Adenylosuccinate synthetase DUF3546 PF12066.8 CCF73131.1 - 1.9e-07 31.2 1.1 5.6e-07 29.7 0.4 2.2 1 1 0 1 1 1 1 Domain of unknown function (DUF3546) ARS2 PF04959.13 CCF73131.1 - 0.00039 20.8 0.4 0.0007 20.0 0.4 1.5 1 0 0 1 1 1 1 Arsenite-resistance protein 2 DUF4187 PF13821.6 CCF73131.1 - 0.00098 18.9 0.5 0.0022 17.7 0.5 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4187) zf-C2H2_4 PF13894.6 CCF73131.1 - 0.061 14.2 2.8 0.2 12.6 2.8 2.0 1 0 0 1 1 1 0 C2H2-type zinc finger zf-met PF12874.7 CCF73131.1 - 0.071 13.5 0.8 0.16 12.4 0.8 1.6 1 0 0 1 1 1 0 Zinc-finger of C2H2 type GAGA PF09237.11 CCF73131.1 - 0.078 12.8 0.2 0.21 11.4 0.2 1.7 1 0 0 1 1 1 0 GAGA factor zf-C2H2 PF00096.26 CCF73131.1 - 1.4 9.5 6.7 0.2 12.2 2.2 2.1 2 0 0 2 2 2 0 Zinc finger, C2H2 type eIF-1a PF01176.19 CCF73132.1 - 1.2e-15 57.0 0.3 1.7e-15 56.6 0.3 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RabGAP-TBC PF00566.18 CCF73133.1 - 1.2e-49 168.9 1.0 1.5e-49 168.6 1.0 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Glyco_transf_20 PF00982.21 CCF73134.1 - 9e-90 301.6 0.3 5.7e-46 157.2 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase family 20 Trehalose_PPase PF02358.16 CCF73134.1 - 6.6e-24 84.3 0.0 1.6e-23 83.0 0.0 1.7 1 0 0 1 1 1 1 Trehalose-phosphatase CBM_20 PF00686.19 CCF73134.1 - 1.2e-10 41.1 0.0 3e-10 39.9 0.0 1.7 1 0 0 1 1 1 1 Starch binding domain Hemocyanin_N PF03722.14 CCF73134.1 - 0.023 15.2 0.1 2 8.9 0.0 3.0 2 0 0 2 2 2 0 Hemocyanin, all-alpha domain Transglut_core2 PF13369.6 CCF73137.1 - 0.18 11.4 0.1 0.34 10.5 0.1 1.4 1 0 0 1 1 1 0 Transglutaminase-like superfamily NTP_transferase PF00483.23 CCF73138.1 - 8.1e-09 35.4 0.0 1.1e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 CCF73138.1 - 4.1e-07 30.5 0.0 5e-07 30.2 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 CCF73138.1 - 0.00031 19.8 0.3 0.00044 19.3 0.3 1.2 1 0 0 1 1 1 1 L-fucokinase DUF4954 PF16314.5 CCF73138.1 - 0.00034 18.9 3.1 0.00054 18.2 3.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Hexapep PF00132.24 CCF73138.1 - 0.0057 16.3 11.4 1.1 9.1 9.8 3.4 2 1 0 2 2 2 1 Bacterial transferase hexapeptide (six repeats) IspD PF01128.19 CCF73138.1 - 0.018 14.8 0.0 0.033 13.9 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RRM_1 PF00076.22 CCF73139.1 - 8.4e-07 28.7 0.0 0.00081 19.2 0.0 2.9 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RSB_motif PF16294.5 CCF73139.1 - 9.3 6.6 11.7 37 4.6 8.4 2.2 1 1 1 2 2 2 0 RNSP1-SAP18 binding (RSB) motif Topoisom_bac PF01131.20 CCF73140.1 - 2.2e-89 300.3 0.0 2.6e-68 230.9 0.0 2.1 1 1 1 2 2 2 2 DNA topoisomerase Toprim PF01751.22 CCF73140.1 - 2.8e-15 56.4 0.0 5.2e-15 55.5 0.0 1.5 1 0 0 1 1 1 1 Toprim domain Toprim_2 PF13155.6 CCF73140.1 - 0.052 14.0 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 Toprim-like ADK_lid PF05191.14 CCF73140.1 - 0.054 13.5 10.4 0.06 13.3 0.3 3.2 3 0 0 3 3 3 0 Adenylate kinase, active site lid SNF2_N PF00176.23 CCF73141.1 - 1.6e-56 191.5 0.0 2.6e-56 190.8 0.0 1.3 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF73141.1 - 8.6e-17 61.5 0.0 2.8e-16 59.8 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF73141.1 - 2e-05 24.6 2.6 0.00033 20.7 0.0 3.0 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CCF73141.1 - 0.00027 20.2 0.0 0.0007 18.9 0.0 1.6 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA PF00004.29 CCF73142.1 - 2e-45 154.4 0.1 6.6e-44 149.5 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_2 PF07724.14 CCF73142.1 - 1.5e-08 34.9 0.0 3.4e-08 33.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 CCF73142.1 - 1.5e-07 31.5 0.2 6.2e-07 29.5 0.2 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 CCF73142.1 - 5.3e-07 29.3 0.0 1.4e-06 28.0 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 CCF73142.1 - 1.3e-05 25.6 0.6 0.002 18.5 0.0 2.8 2 1 0 3 3 3 1 AAA ATPase domain AAA_22 PF13401.6 CCF73142.1 - 2.3e-05 24.7 0.7 0.0083 16.4 0.0 2.9 1 1 2 3 3 3 1 AAA domain Prot_ATP_ID_OB PF16450.5 CCF73142.1 - 3.5e-05 23.7 0.3 0.00022 21.1 0.0 2.2 2 0 0 2 2 2 1 Proteasomal ATPase OB C-terminal domain RuvB_N PF05496.12 CCF73142.1 - 6.4e-05 22.7 0.0 0.00027 20.7 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 CCF73142.1 - 0.0004 20.9 0.0 0.0011 19.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_28 PF13521.6 CCF73142.1 - 0.00045 20.5 0.0 0.0011 19.2 0.0 1.8 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 CCF73142.1 - 0.00046 19.4 0.0 0.00092 18.4 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) NTPase_1 PF03266.15 CCF73142.1 - 0.00081 19.3 0.4 0.097 12.6 0.0 3.0 3 0 0 3 3 3 1 NTPase RNA_helicase PF00910.22 CCF73142.1 - 0.00082 19.7 0.0 0.002 18.5 0.0 1.7 1 0 0 1 1 1 1 RNA helicase Mg_chelatase PF01078.21 CCF73142.1 - 0.0017 17.7 0.2 0.0044 16.4 0.2 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 CCF73142.1 - 0.002 17.4 0.0 0.0078 15.5 0.0 1.8 1 1 0 1 1 1 1 TIP49 P-loop domain TsaE PF02367.17 CCF73142.1 - 0.0035 17.3 0.0 0.0065 16.5 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 CCF73142.1 - 0.0037 17.0 0.0 0.0076 16.0 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_14 PF13173.6 CCF73142.1 - 0.0044 17.0 0.1 0.031 14.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 CCF73142.1 - 0.0046 16.5 0.0 0.022 14.3 0.0 2.1 1 1 0 1 1 1 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 CCF73142.1 - 0.0047 16.6 0.4 0.057 13.1 0.0 2.7 3 1 0 3 3 3 1 Sigma-54 interaction domain AAA_24 PF13479.6 CCF73142.1 - 0.0059 16.3 0.1 0.015 15.0 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CCF73142.1 - 0.0066 16.6 0.0 0.018 15.2 0.0 1.8 1 0 0 1 1 1 1 AAA domain Parvo_NS1 PF01057.17 CCF73142.1 - 0.0071 15.5 0.0 0.027 13.6 0.0 1.8 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AAA_3 PF07726.11 CCF73142.1 - 0.012 15.5 0.0 0.042 13.7 0.0 1.9 2 0 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_25 PF13481.6 CCF73142.1 - 0.015 14.8 0.5 0.071 12.7 0.1 2.1 1 1 0 2 2 2 0 AAA domain NACHT PF05729.12 CCF73142.1 - 0.019 14.9 0.1 0.16 11.9 0.0 2.3 2 0 0 2 2 2 0 NACHT domain AAA_17 PF13207.6 CCF73142.1 - 0.036 14.5 0.2 0.14 12.6 0.0 2.2 3 0 0 3 3 1 0 AAA domain NB-ARC PF00931.22 CCF73142.1 - 0.052 12.7 0.5 0.19 10.9 0.0 2.1 3 0 0 3 3 3 0 NB-ARC domain ATPase_2 PF01637.18 CCF73142.1 - 0.07 13.0 0.8 1.1 9.1 0.0 2.7 2 1 0 3 3 2 0 ATPase domain predominantly from Archaea ATPase PF06745.13 CCF73142.1 - 0.081 12.3 1.5 1.1 8.6 0.0 2.6 3 0 0 3 3 3 0 KaiC AAA_30 PF13604.6 CCF73142.1 - 0.13 11.9 0.2 0.36 10.5 0.2 1.7 1 1 0 1 1 1 0 AAA domain AAA_11 PF13086.6 CCF73142.1 - 0.23 11.2 1.3 0.39 10.5 0.4 2.1 2 1 0 2 2 2 0 AAA domain AAA_23 PF13476.6 CCF73143.1 - 2.1e-24 87.2 16.4 2.1e-24 87.2 16.4 3.8 2 2 1 3 3 3 1 AAA domain AAA_15 PF13175.6 CCF73143.1 - 1.7e-17 64.2 11.1 1.2e-12 48.3 0.0 2.7 1 1 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 CCF73143.1 - 3e-16 59.6 0.0 1.8e-07 30.8 0.0 2.3 2 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 CCF73143.1 - 1.1e-09 38.5 1.4 0.0003 20.7 0.0 3.1 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_tran PF00005.27 CCF73143.1 - 0.00012 22.6 10.9 0.0021 18.6 0.0 3.7 3 2 0 3 3 3 2 ABC transporter AAA_29 PF13555.6 CCF73143.1 - 0.00024 20.8 0.0 0.00069 19.3 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF5082 PF16888.5 CCF73143.1 - 0.0011 19.2 8.6 0.0011 19.2 8.6 3.4 2 1 1 3 3 3 1 Domain of unknown function (DUF5082) SbcCD_C PF13558.6 CCF73143.1 - 0.0016 18.6 0.0 0.0035 17.6 0.0 1.5 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_16 PF13191.6 CCF73143.1 - 0.0032 17.9 0.0 0.033 14.6 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 CCF73143.1 - 0.018 15.3 0.1 0.42 10.9 0.0 3.2 3 0 0 3 3 3 0 AAA domain AAA_13 PF13166.6 CCF73143.1 - 0.021 13.5 0.0 0.021 13.5 0.0 3.9 4 1 0 4 4 3 0 AAA domain GTP_EFTU PF00009.27 CCF73143.1 - 0.028 13.9 0.0 0.094 12.2 0.0 1.8 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain Fez1 PF06818.15 CCF73143.1 - 0.039 14.4 21.4 0.32 11.4 5.7 2.6 2 0 0 2 2 2 0 Fez1 AAA_33 PF13671.6 CCF73143.1 - 0.091 12.9 0.1 0.31 11.2 0.1 1.9 1 0 0 1 1 1 0 AAA domain DUF4407 PF14362.6 CCF73143.1 - 1 8.6 8.9 1.2 8.4 2.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) AAA_24 PF13479.6 CCF73143.1 - 1.6 8.4 5.9 0.71 9.6 0.0 2.8 3 1 0 3 3 3 0 AAA domain Fungal_TACC PF12709.7 CCF73143.1 - 2.1 8.9 13.9 13 6.4 5.3 3.4 2 1 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins APG6_N PF17675.1 CCF73143.1 - 3.7 8.1 25.6 2.5 8.6 15.5 2.9 2 1 0 2 2 2 0 Apg6 coiled-coil region UQ_con PF00179.26 CCF73144.1 - 3.7e-40 136.8 0.0 4.1e-40 136.7 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 CCF73144.1 - 0.0083 16.4 0.0 0.01 16.1 0.0 1.2 1 0 0 1 1 1 1 RWD domain RRM_1 PF00076.22 CCF73145.1 - 3.5e-36 122.8 0.3 1.1e-08 34.8 0.1 4.3 4 0 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF73145.1 - 7.3e-34 116.1 5.0 5.5e-18 64.8 0.0 4.1 3 1 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF73145.1 - 3.9e-11 42.7 0.4 0.033 14.0 0.0 4.3 4 0 0 4 4 4 4 Occluded RNA-recognition motif RRM_8 PF11835.8 CCF73145.1 - 1.6e-08 34.6 0.0 9.6e-08 32.1 0.0 2.3 2 0 0 2 2 2 1 RRM-like domain DUF848 PF05852.11 CCF73146.1 - 0.064 13.4 0.1 0.11 12.6 0.1 1.3 1 0 0 1 1 1 0 Gammaherpesvirus protein of unknown function (DUF848) GCIP PF13324.6 CCF73146.1 - 0.16 11.5 0.1 0.34 10.5 0.0 1.5 2 0 0 2 2 2 0 Grap2 and cyclin-D-interacting HSBP1 PF06825.12 CCF73146.1 - 0.22 11.4 2.6 3.9 7.4 2.5 2.7 1 1 0 1 1 1 0 Heat shock factor binding protein 1 WD40 PF00400.32 CCF73147.1 - 4.3e-30 103.3 23.8 2.3e-06 28.2 0.5 7.5 8 0 0 8 8 8 5 WD domain, G-beta repeat Coatomer_WDAD PF04053.14 CCF73147.1 - 1.5e-27 96.8 0.0 4.5e-27 95.2 0.0 1.7 1 1 0 1 1 1 1 Coatomer WD associated region COPI_C PF06957.11 CCF73147.1 - 2.8e-26 92.2 1.7 3.5e-22 78.7 0.0 2.4 2 1 0 2 2 2 2 Coatomer (COPI) alpha subunit C-terminus ANAPC4_WD40 PF12894.7 CCF73147.1 - 1.8e-05 24.9 0.2 0.025 14.9 0.1 3.5 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain TPR_14 PF13428.6 CCF73147.1 - 0.0077 17.0 0.1 7.6 7.6 0.1 4.1 4 0 0 4 4 4 1 Tetratricopeptide repeat Ge1_WD40 PF16529.5 CCF73147.1 - 0.038 12.9 0.1 0.076 12.0 0.1 1.5 1 0 0 1 1 1 0 WD40 region of Ge1, enhancer of mRNA-decapping protein MRP-L27 PF09809.9 CCF73148.1 - 1.4e-11 44.2 0.1 1.8e-11 43.9 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L27 AP2 PF00847.20 CCF73149.1 - 6.3e-07 29.5 6.0 0.0037 17.5 0.4 2.9 3 0 0 3 3 3 2 AP2 domain DUF1518 PF07469.12 CCF73149.1 - 5.7 7.4 10.6 28 5.2 0.3 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1518) C2 PF00168.30 CCF73151.1 - 0.097 13.0 0.0 0.43 10.9 0.0 2.1 2 0 0 2 2 2 0 C2 domain tRNA-synt_2d PF01409.20 CCF73152.1 - 4.1e-33 114.9 0.0 6.1e-33 114.3 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) FDX-ACB PF03147.14 CCF73152.1 - 3.9e-16 59.2 0.0 1.1e-15 57.8 0.0 1.8 2 0 0 2 2 2 1 Ferredoxin-fold anticodon binding domain tRNA-synt_2 PF00152.20 CCF73152.1 - 0.01 14.9 0.0 1.9 7.5 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class II (D, K and N) MACPF PF01823.19 CCF73154.1 - 4.7e-27 95.4 1.8 7.1e-27 94.9 1.8 1.3 1 0 0 1 1 1 1 MAC/Perforin domain XRN_N PF03159.18 CCF73155.1 - 2e-80 269.7 0.0 3.2e-80 269.1 0.0 1.3 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN_M PF17846.1 CCF73155.1 - 1.1e-51 176.2 3.9 3e-37 128.6 1.0 2.4 1 1 1 2 2 2 2 Xrn1 helical domain SH3_12 PF18129.1 CCF73155.1 - 7.3e-09 35.6 0.0 1.3e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 Xrn1 SH3-like domain XRN1_D1 PF18332.1 CCF73155.1 - 0.0036 17.1 0.3 0.0092 15.8 0.3 1.6 1 0 0 1 1 1 1 Exoribonuclease Xrn1 D1 domain DHO_dh PF01180.21 CCF73156.1 - 1.2e-85 287.3 0.0 1.5e-85 286.9 0.0 1.0 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NMO PF03060.15 CCF73156.1 - 7.4e-07 28.9 0.0 1.3e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 Nitronate monooxygenase FMN_dh PF01070.18 CCF73156.1 - 0.00014 21.0 0.0 0.00022 20.4 0.0 1.2 1 0 0 1 1 1 1 FMN-dependent dehydrogenase AAA PF00004.29 CCF73157.1 - 2.6e-47 160.5 0.0 6.5e-35 120.4 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF73157.1 - 1.1e-10 41.2 0.2 7.1e-10 38.5 0.0 2.3 2 0 0 2 2 2 1 AAA+ lid domain AAA_5 PF07728.14 CCF73157.1 - 9.5e-10 38.6 0.0 4.3e-06 26.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 CCF73157.1 - 1.9e-08 33.9 0.1 0.0035 16.6 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_16 PF13191.6 CCF73157.1 - 1e-06 29.2 0.0 0.0088 16.4 0.0 2.9 3 0 0 3 3 2 2 AAA ATPase domain TsaE PF02367.17 CCF73157.1 - 1.4e-06 28.4 0.0 0.042 13.8 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_2 PF07724.14 CCF73157.1 - 1.7e-06 28.3 0.0 2e-05 24.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) NACHT PF05729.12 CCF73157.1 - 1.8e-06 27.9 0.3 0.31 11.0 0.0 3.9 3 1 1 4 4 4 2 NACHT domain CDC48_N PF02359.18 CCF73157.1 - 1.9e-06 28.0 0.0 4.4e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_18 PF13238.6 CCF73157.1 - 7.7e-06 26.5 0.0 0.0045 17.5 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_33 PF13671.6 CCF73157.1 - 1.7e-05 25.0 0.0 0.015 15.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 CCF73157.1 - 2.1e-05 24.3 0.0 0.021 14.5 0.0 2.8 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain Mg_chelatase PF01078.21 CCF73157.1 - 3.6e-05 23.3 0.0 0.0089 15.4 0.0 2.3 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 CCF73157.1 - 0.00012 21.8 0.0 0.29 10.8 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_22 PF13401.6 CCF73157.1 - 0.00014 22.2 4.0 0.049 13.9 0.6 4.0 2 2 1 3 3 3 1 AAA domain AAA_7 PF12775.7 CCF73157.1 - 0.00022 20.8 0.1 0.045 13.3 0.0 2.3 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_24 PF13479.6 CCF73157.1 - 0.00039 20.2 0.0 0.047 13.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_14 PF13173.6 CCF73157.1 - 0.00045 20.3 0.0 0.13 12.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 CCF73157.1 - 0.00068 20.0 0.0 0.039 14.4 0.0 2.5 2 0 0 2 2 2 1 RNA helicase NB-ARC PF00931.22 CCF73157.1 - 0.00088 18.5 0.1 1.1 8.4 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain AAA_28 PF13521.6 CCF73157.1 - 0.00089 19.5 0.0 0.17 12.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain ATPase PF06745.13 CCF73157.1 - 0.0011 18.3 0.2 0.29 10.4 0.1 2.4 2 0 0 2 2 2 1 KaiC PhoH PF02562.16 CCF73157.1 - 0.0012 18.3 0.1 1.7 8.1 0.0 2.3 2 0 0 2 2 2 2 PhoH-like protein AAA_25 PF13481.6 CCF73157.1 - 0.0026 17.3 0.3 0.6 9.6 0.0 2.9 3 1 0 3 3 3 1 AAA domain IstB_IS21 PF01695.17 CCF73157.1 - 0.0032 17.2 0.0 0.24 11.1 0.0 2.6 2 0 0 2 2 2 1 IstB-like ATP binding protein ATPase_2 PF01637.18 CCF73157.1 - 0.0033 17.4 0.3 9.2 6.1 0.0 3.4 3 1 1 4 4 3 0 ATPase domain predominantly from Archaea DUF2075 PF09848.9 CCF73157.1 - 0.0039 16.5 0.0 0.42 9.8 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_3 PF07726.11 CCF73157.1 - 0.0042 16.9 0.0 0.067 13.1 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DEAD PF00270.29 CCF73157.1 - 0.018 14.8 0.8 9.3 6.0 0.0 3.4 3 1 0 4 4 4 0 DEAD/DEAH box helicase AAA_30 PF13604.6 CCF73157.1 - 0.019 14.7 0.1 0.35 10.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 CCF73157.1 - 0.019 14.0 0.0 0.15 11.1 0.0 2.1 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 DNA_pol3_delta2 PF13177.6 CCF73157.1 - 0.023 14.5 0.0 1.1 9.0 0.0 3.0 2 2 0 2 2 2 0 DNA polymerase III, delta subunit ResIII PF04851.15 CCF73157.1 - 0.027 14.5 0.0 8.6 6.3 0.0 2.7 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_17 PF13207.6 CCF73157.1 - 0.03 14.7 0.3 10 6.5 0.0 3.3 2 1 0 3 3 2 0 AAA domain Zeta_toxin PF06414.12 CCF73157.1 - 0.037 13.3 0.0 2.9 7.1 0.0 2.3 2 0 0 2 2 2 0 Zeta toxin ABC_tran PF00005.27 CCF73157.1 - 0.041 14.4 0.4 0.89 10.1 0.0 2.4 2 0 0 2 2 2 0 ABC transporter AAA_19 PF13245.6 CCF73157.1 - 0.043 14.2 0.1 0.87 9.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 CCF73157.1 - 0.069 13.1 0.0 0.29 11.0 0.0 2.1 2 0 0 2 2 2 0 Rad17 P-loop domain SKI PF01202.22 CCF73157.1 - 0.076 13.1 0.1 16 5.6 0.0 2.5 2 0 0 2 2 2 0 Shikimate kinase KTI12 PF08433.10 CCF73157.1 - 0.083 12.3 0.0 0.25 10.8 0.0 1.8 2 0 0 2 2 1 0 Chromatin associated protein KTI12 AAA_11 PF13086.6 CCF73157.1 - 0.093 12.5 0.1 0.65 9.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 CCF73157.1 - 0.1 12.1 0.1 4.6 6.8 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 CCF73157.1 - 0.13 11.3 0.2 8.9 5.3 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein APS_kinase PF01583.20 CCF73157.1 - 0.13 12.1 0.1 7.2 6.5 0.0 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase AIP3 PF03915.13 CCF73158.1 - 0.0047 16.1 0.6 0.0073 15.4 0.6 1.2 1 0 0 1 1 1 1 Actin interacting protein 3 CRM1_C PF08767.11 CCF73159.1 - 2.6e-78 263.4 3.5 2.6e-78 263.4 3.5 2.3 2 0 0 2 2 2 1 CRM1 C terminal Xpo1 PF08389.12 CCF73159.1 - 5.9e-31 107.5 2.5 5.9e-31 107.5 2.5 4.6 5 0 0 5 5 5 1 Exportin 1-like protein CRM1_repeat_3 PF18787.1 CCF73159.1 - 1.3e-21 76.4 0.6 1.2e-20 73.3 0.2 2.7 2 0 0 2 2 2 1 CRM1 / Exportin repeat 3 CRM1_repeat_2 PF18784.1 CCF73159.1 - 5.8e-16 57.9 0.4 2.1e-15 56.1 0.4 2.0 1 0 0 1 1 1 1 CRM1 / Exportin repeat 2 IBN_N PF03810.19 CCF73159.1 - 9.4e-11 41.5 0.1 3.4e-10 39.7 0.1 2.1 1 0 0 1 1 1 1 Importin-beta N-terminal domain CRM1_repeat PF18777.1 CCF73159.1 - 2.5e-06 26.9 0.1 8.8e-06 25.1 0.1 1.9 1 0 0 1 1 1 1 Chromosome region maintenance or exportin repeat DUF3385 PF11865.8 CCF73159.1 - 0.003 17.5 1.5 0.032 14.1 0.1 3.4 4 0 0 4 4 4 1 Domain of unknown function (DUF3385) TYW3 PF02676.14 CCF73160.1 - 2.1e-29 102.4 0.0 3.6e-29 101.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase TYW3 Met_10 PF02475.16 CCF73160.1 - 5.4e-25 88.3 0.0 1.1e-24 87.3 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Kelch_4 PF13418.6 CCF73160.1 - 1.2e-18 66.8 8.9 4.5e-05 23.4 0.0 5.7 5 0 0 5 5 5 4 Galactose oxidase, central domain Kelch_6 PF13964.6 CCF73160.1 - 4.9e-12 45.7 17.0 0.0011 19.2 1.0 5.6 6 0 0 6 6 6 4 Kelch motif Kelch_1 PF01344.25 CCF73160.1 - 3.3e-10 39.4 18.6 0.00032 20.2 0.8 4.6 5 0 0 5 5 5 3 Kelch motif Kelch_5 PF13854.6 CCF73160.1 - 5.7e-10 38.9 10.9 0.027 14.4 0.0 5.4 5 0 0 5 5 5 3 Kelch motif MTS PF05175.14 CCF73160.1 - 6.8e-08 32.2 0.0 1.2e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Kelch_2 PF07646.15 CCF73160.1 - 1.8e-06 27.7 11.5 0.066 13.2 0.1 4.8 4 0 0 4 4 4 2 Kelch motif Kelch_3 PF13415.6 CCF73160.1 - 1.4e-05 25.3 6.3 0.27 11.6 0.5 5.2 5 0 0 5 5 5 2 Galactose oxidase, central domain Methyltransf_25 PF13649.6 CCF73160.1 - 0.0014 19.3 0.0 0.005 17.5 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain MFS_2 PF13347.6 CCF73162.1 - 1e-32 113.3 36.2 1.6e-25 89.6 12.4 2.1 2 0 0 2 2 2 2 MFS/sugar transport protein MFS_1 PF07690.16 CCF73162.1 - 2.4e-06 26.7 31.4 5.8e-06 25.5 30.4 1.9 1 1 0 1 1 1 1 Major Facilitator Superfamily Strabismus PF06638.11 CCF73162.1 - 0.13 10.9 2.7 0.22 10.2 2.7 1.3 1 0 0 1 1 1 0 Strabismus protein DUF2070 PF09843.9 CCF73164.1 - 4.9 5.3 8.9 5.8 5.1 8.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 7TM_GPCR_Sri PF10327.9 CCF73165.1 - 0.0048 16.1 0.2 0.0057 15.9 0.2 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sri DUF3082 PF11282.8 CCF73167.1 - 0.0028 17.9 0.3 0.0047 17.2 0.3 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3082) Adaptin_N PF01602.20 CCF73167.1 - 0.035 12.7 0.6 0.041 12.4 0.6 1.0 1 0 0 1 1 1 0 Adaptin N terminal region TFR_dimer PF04253.15 CCF73167.1 - 0.2 11.8 0.1 0.27 11.3 0.1 1.2 1 0 0 1 1 1 0 Transferrin receptor-like dimerisation domain Potass_KdpF PF09604.10 CCF73167.1 - 1.4 9.0 4.2 2.2 8.4 4.2 1.3 1 0 0 1 1 1 0 F subunit of K+-transporting ATPase (Potass_KdpF) AChE_tetra PF08674.10 CCF73168.1 - 6.6 6.5 7.3 0.58 9.9 1.3 2.2 2 0 0 2 2 2 0 Acetylcholinesterase tetramerisation domain DUF2070 PF09843.9 CCF73170.1 - 4.9 5.3 8.9 5.8 5.1 8.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) 7TM_GPCR_Sri PF10327.9 CCF73171.1 - 0.0034 16.6 0.1 0.0043 16.3 0.1 1.1 1 0 0 1 1 1 1 Serpentine type 7TM GPCR chemoreceptor Sri Glycolytic PF00274.19 CCF73172.1 - 2e-100 335.9 0.0 1.1e-99 333.5 0.0 1.8 1 1 0 1 1 1 1 Fructose-bisphosphate aldolase class-I HA2 PF04408.23 CCF73173.1 - 0.14 12.5 0.0 0.31 11.3 0.0 1.7 1 0 0 1 1 1 0 Helicase associated domain (HA2) Ribosomal_L22 PF00237.19 CCF73174.1 - 1.1e-06 28.8 0.0 1.9e-06 28.1 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e MgtE_N PF03448.17 CCF73174.1 - 0.038 14.6 0.0 0.078 13.6 0.0 1.5 1 0 0 1 1 1 0 MgtE intracellular N domain Osteoregulin PF07175.11 CCF73174.1 - 0.097 12.9 0.0 0.16 12.1 0.0 1.3 1 0 0 1 1 1 0 Osteoregulin Kin17_mid PF10357.9 CCF73175.1 - 5.7e-43 145.8 4.9 5.7e-43 145.8 4.9 1.6 2 0 0 2 2 2 1 Domain of Kin17 curved DNA-binding protein KOW PF00467.29 CCF73175.1 - 0.0036 17.2 0.2 0.0036 17.2 0.2 2.3 3 0 0 3 3 3 1 KOW motif zf-met PF12874.7 CCF73175.1 - 0.011 16.1 3.4 0.025 15.0 3.4 1.6 1 0 0 1 1 1 0 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 CCF73175.1 - 0.017 15.4 5.0 0.039 14.2 5.0 1.7 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding Synaptobrevin PF00957.21 CCF73177.1 - 0.00042 20.0 0.1 0.00042 20.0 0.1 2.4 1 1 1 2 2 2 1 Synaptobrevin SGS PF05002.15 CCF73177.1 - 0.017 15.2 0.0 0.041 14.0 0.0 1.6 1 0 0 1 1 1 0 SGS domain Pex24p PF06398.11 CCF73177.1 - 0.23 10.4 2.3 0.31 10.0 2.3 1.3 1 1 0 1 1 1 0 Integral peroxisomal membrane peroxin V-SNARE_C PF12352.8 CCF73178.1 - 0.00044 20.5 2.3 0.0011 19.1 2.3 1.7 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus Sec20 PF03908.13 CCF73178.1 - 0.004 17.0 4.8 0.015 15.2 0.5 3.1 2 1 2 4 4 4 1 Sec20 DUF713 PF05218.14 CCF73178.1 - 0.05 13.3 6.2 0.11 12.2 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF713) KELK PF15796.5 CCF73178.1 - 0.12 12.8 0.8 11 6.6 0.0 2.8 3 0 0 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase CtaG_Cox11 PF04442.14 CCF73179.1 - 2.5e-53 180.1 0.3 4.1e-53 179.5 0.3 1.3 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 Vps53_N PF04100.12 CCF73180.1 - 0.096 11.6 0.6 0.15 11.0 0.1 1.5 2 0 0 2 2 2 0 Vps53-like, N-terminal SPOC PF07744.13 CCF73181.1 - 1e-08 35.2 0.4 3.6e-08 33.5 0.1 1.9 2 0 0 2 2 2 1 SPOC domain RRM_1 PF00076.22 CCF73181.1 - 0.00093 19.0 1.6 0.019 14.8 0.0 3.1 4 0 0 4 4 4 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 CCF73181.1 - 0.22 11.5 0.0 0.58 10.2 0.0 1.7 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif DnaB_2 PF07261.11 CCF73182.1 - 0.2 11.4 2.5 0.24 11.2 0.3 2.4 2 1 0 2 2 2 0 Replication initiation and membrane attachment PAC4 PF16093.5 CCF73183.1 - 0.021 15.0 0.0 0.027 14.7 0.0 1.2 1 0 0 1 1 1 0 Proteasome assembly chaperone 4 Methyltransf_5 PF01795.19 CCF73184.1 - 3.8e-81 273.0 0.0 1.6e-79 267.7 0.0 2.2 1 1 0 1 1 1 1 MraW methylase family Methyltransf_31 PF13847.6 CCF73184.1 - 0.0015 18.4 0.0 0.0047 16.7 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF73184.1 - 0.17 12.6 0.0 0.57 10.9 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain TAP42 PF04177.12 CCF73185.1 - 2.7e-30 105.6 0.6 9e-15 54.6 0.0 2.4 1 1 1 2 2 2 2 TAP42-like family Lactamase_B_2 PF12706.7 CCF73186.1 - 1.9e-08 34.1 0.0 8.3e-07 28.7 0.0 2.5 2 1 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 CCF73186.1 - 2.2e-06 27.8 0.1 3.7e-06 27.1 0.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 CCF73186.1 - 0.0016 18.0 0.0 0.0043 16.7 0.0 1.6 1 0 0 1 1 1 1 tRNase Z endonuclease TFIIA_gamma_N PF02268.16 CCF73186.1 - 0.098 12.7 0.3 0.27 11.3 0.3 1.8 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain Glycos_transf_4 PF00953.21 CCF73187.1 - 2.4e-25 89.3 12.8 2.4e-25 89.3 12.8 1.9 2 0 0 2 2 2 1 Glycosyl transferase family 4 AMP-binding PF00501.28 CCF73188.1 - 4.9e-65 219.8 0.0 4.7e-64 216.5 0.0 2.0 1 1 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CCF73188.1 - 6.3e-05 23.9 0.0 0.00013 22.9 0.0 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Mso1_Sec1_bdg PF14475.6 CCF73188.1 - 0.27 10.9 0.9 8.6 6.1 0.0 2.4 2 0 0 2 2 2 0 Sec1-binding region of Mso1 SMC_N PF02463.19 CCF73189.1 - 2.8e-23 82.5 0.0 5.2e-23 81.6 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CCF73189.1 - 1.3e-11 45.4 20.3 1.3e-11 45.4 20.3 4.9 2 2 2 4 4 2 1 AAA domain AAA_21 PF13304.6 CCF73189.1 - 0.00089 19.1 8.6 0.0036 17.2 0.1 3.5 3 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system ZapB PF06005.12 CCF73189.1 - 0.0023 18.3 8.7 0.0023 18.3 8.7 7.7 3 2 4 7 7 6 2 Cell division protein ZapB DUF5082 PF16888.5 CCF73189.1 - 0.012 15.8 5.9 0.012 15.8 5.9 7.4 4 2 2 6 6 6 0 Domain of unknown function (DUF5082) DUF4952 PF16310.5 CCF73189.1 - 0.039 14.2 0.2 4.5 7.6 0.1 2.9 2 0 0 2 2 2 0 Domian of unknown function (DUF4952) Spc7 PF08317.11 CCF73189.1 - 0.048 12.5 66.7 0.082 11.8 13.2 4.4 2 2 2 4 4 4 0 Spc7 kinetochore protein AAA_27 PF13514.6 CCF73189.1 - 0.049 13.2 2.5 0.081 12.5 0.0 2.7 3 0 0 3 3 3 0 AAA domain AAA_29 PF13555.6 CCF73189.1 - 0.14 11.9 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATG16 PF08614.11 CCF73189.1 - 6 7.0 51.8 0.38 11.0 21.1 4.9 2 2 2 4 4 4 0 Autophagy protein 16 (ATG16) AAA_15 PF13175.6 CCF73189.1 - 7.6 6.1 81.6 0.019 14.7 26.3 3.9 2 2 1 3 3 1 0 AAA ATPase domain DCP2 PF05026.13 CCF73190.1 - 0.11 12.9 0.0 0.24 11.8 0.0 1.5 1 0 0 1 1 1 0 Dcp2, box A domain PPO1_DWL PF12142.8 CCF73190.1 - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Polyphenol oxidase middle domain Radical_SAM PF04055.21 CCF73191.1 - 1.5e-21 77.5 0.0 3.9e-21 76.1 0.0 1.7 2 0 0 2 2 2 1 Radical SAM superfamily Wyosine_form PF08608.12 CCF73191.1 - 1.3e-18 67.1 0.0 2.9e-18 66.0 0.0 1.6 1 0 0 1 1 1 1 Wyosine base formation Flavodoxin_1 PF00258.25 CCF73191.1 - 1.7e-06 28.3 0.0 4.1e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 Flavodoxin RNA_pol_A_bac PF01000.26 CCF73192.1 - 1.7e-06 28.4 0.0 4.3e-06 27.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 CCF73192.1 - 2.4e-05 23.7 0.0 5.1e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ThiF PF00899.21 CCF73193.1 - 1e-51 175.7 0.2 1.5e-51 175.1 0.2 1.2 1 0 0 1 1 1 1 ThiF family UBA_e1_thiolCys PF10585.9 CCF73193.1 - 6.8e-09 36.0 0.9 0.0031 17.5 0.1 2.6 2 1 0 2 2 2 2 Ubiquitin-activating enzyme active site UAE_UbL PF14732.6 CCF73193.1 - 2e-07 31.5 0.0 5.3e-07 30.1 0.0 1.7 1 0 0 1 1 1 1 Ubiquitin/SUMO-activating enzyme ubiquitin-like domain ZZ PF00569.17 CCF73194.1 - 2e-07 30.7 7.4 3.9e-07 29.8 7.4 1.5 1 0 0 1 1 1 1 Zinc finger, ZZ type Myb_DNA-binding PF00249.31 CCF73194.1 - 1.8e-06 28.0 0.0 4.3e-06 26.8 0.0 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF73194.1 - 1.2e-05 25.4 0.0 4.4e-05 23.7 0.0 2.0 1 0 0 1 1 1 1 Myb-like DNA-binding domain AP2 PF00847.20 CCF73194.1 - 0.0044 17.2 0.0 0.016 15.5 0.0 2.0 1 0 0 1 1 1 1 AP2 domain Thioredoxin PF00085.20 CCF73195.1 - 9.2e-17 60.9 0.0 2.4e-15 56.4 0.0 2.4 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_7 PF13899.6 CCF73195.1 - 0.025 14.8 0.0 0.064 13.5 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin-like Suf PF05843.14 CCF73196.1 - 0.00014 22.0 0.3 0.034 14.1 0.3 3.0 3 0 0 3 3 3 1 Suppressor of forked protein (Suf) TPR_14 PF13428.6 CCF73196.1 - 0.00072 20.2 0.2 1.1 10.2 0.0 3.6 3 0 0 3 3 3 1 Tetratricopeptide repeat TatC PF00902.18 CCF73196.1 - 0.93 9.3 5.9 2.2 8.1 5.9 1.5 1 0 0 1 1 1 0 Sec-independent protein translocase protein (TatC) DUF760 PF05542.11 CCF73197.1 - 8.2e-23 80.6 1.6 3.1e-10 40.3 0.3 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF760) SlyX PF04102.12 CCF73198.1 - 0.05 14.2 1.1 11 6.7 0.0 2.6 2 1 0 2 2 2 0 SlyX ArfGap PF01412.18 CCF73200.1 - 4.9e-39 133.0 1.1 6.2e-39 132.7 0.2 1.6 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf Pkinase PF00069.25 CCF73201.1 - 3.3e-46 157.8 0.3 4e-46 157.5 0.3 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73201.1 - 2.9e-31 108.7 0.0 3.9e-31 108.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF73201.1 - 2.1e-08 33.9 0.0 4e-08 32.9 0.0 1.5 1 1 0 1 1 1 1 Kinase-like Kdo PF06293.14 CCF73201.1 - 0.002 17.5 0.1 0.0032 16.8 0.1 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 CCF73201.1 - 0.0027 16.7 1.5 0.017 14.1 0.1 2.1 1 1 1 2 2 2 1 Haspin like kinase domain Seadorna_VP7 PF07387.11 CCF73201.1 - 0.0091 15.1 0.1 0.016 14.3 0.1 1.3 1 0 0 1 1 1 1 Seadornavirus VP7 APH PF01636.23 CCF73201.1 - 0.012 15.5 0.0 0.019 14.9 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family FTA2 PF13095.6 CCF73201.1 - 0.025 14.2 0.2 0.064 12.9 0.1 1.6 1 1 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pkinase_fungal PF17667.1 CCF73201.1 - 0.069 11.9 0.1 0.075 11.8 0.1 1.2 1 0 0 1 1 1 0 Fungal protein kinase IMCp PF12314.8 CCF73202.1 - 2.6e-19 69.3 57.4 1.1e-13 51.2 29.6 2.3 1 1 1 2 2 2 2 Inner membrane complex protein DUF2922 PF11148.8 CCF73202.1 - 0.11 12.3 0.4 0.11 12.3 0.4 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) Ribosomal_L32p PF01783.23 CCF73203.1 - 0.0013 19.0 4.0 0.0037 17.5 4.0 1.8 1 0 0 1 1 1 1 Ribosomal L32p protein family SpoU_methylase PF00588.19 CCF73204.1 - 9.2e-19 68.0 0.0 1.4e-18 67.4 0.0 1.3 1 0 0 1 1 1 1 SpoU rRNA Methylase family tRNA-synt_His PF13393.6 CCF73205.1 - 2.8e-40 138.5 0.0 4e-40 138.0 0.0 1.2 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 CCF73205.1 - 9.9e-10 38.4 0.0 2.2e-09 37.4 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain HGTP_anticodon2 PF12745.7 CCF73205.1 - 6.4e-06 25.9 0.1 1.6e-05 24.6 0.1 1.7 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs tRNA-synt_2d PF01409.20 CCF73205.1 - 0.0041 16.6 0.1 0.01 15.3 0.1 1.7 1 1 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA-synt_2b PF00587.25 CCF73205.1 - 0.011 15.7 1.4 0.053 13.5 1.4 2.2 1 1 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2 PF00152.20 CCF73205.1 - 0.021 13.9 0.6 0.17 11.0 0.3 2.3 2 1 0 2 2 2 0 tRNA synthetases class II (D, K and N) DUF2505 PF10698.9 CCF73205.1 - 0.16 12.1 0.0 0.28 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2505) WD40 PF00400.32 CCF73208.1 - 5.9e-11 42.7 0.9 1.1 10.3 0.0 5.8 6 0 0 6 6 6 4 WD domain, G-beta repeat CAF1C_H4-bd PF12265.8 CCF73208.1 - 4.8e-09 36.3 0.0 1.2e-08 35.0 0.0 1.8 1 0 0 1 1 1 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex ANAPC4_WD40 PF12894.7 CCF73208.1 - 0.0045 17.3 0.1 7.6 6.9 0.0 3.6 1 1 3 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 CCF73208.1 - 0.062 11.9 1.0 2.3 6.7 0.1 2.5 2 1 0 2 2 2 0 Nucleoporin Nup120/160 CBP PF12192.8 CCF73208.1 - 0.075 13.2 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Fungal calcium binding protein DUF3642 PF12182.8 CCF73208.1 - 0.14 12.4 0.0 0.41 11.0 0.0 1.8 1 0 0 1 1 1 0 Bacterial lipoprotein WD40 PF00400.32 CCF73209.1 - 1.2e-10 41.8 16.2 0.65 11.0 0.0 9.0 8 0 0 8 8 8 3 WD domain, G-beta repeat Cytochrome_C7 PF14522.6 CCF73209.1 - 0.037 14.0 0.2 3.3 7.8 0.2 2.4 2 0 0 2 2 2 0 Cytochrome c7 and related cytochrome c Apyrase PF06079.11 CCF73209.1 - 0.091 11.9 0.1 0.15 11.3 0.1 1.2 1 0 0 1 1 1 0 Apyrase RSB_motif PF16294.5 CCF73209.1 - 0.25 11.6 0.1 0.41 11.0 0.1 1.2 1 0 0 1 1 1 0 RNSP1-SAP18 binding (RSB) motif WD40 PF00400.32 CCF73210.1 - 8.6e-15 54.9 10.2 0.0016 19.3 0.4 5.6 5 0 0 5 5 5 4 WD domain, G-beta repeat WD40_like PF17005.5 CCF73210.1 - 0.00029 20.3 0.0 0.63 9.3 0.0 2.6 3 1 0 3 3 3 2 WD40-like domain PQQ PF01011.21 CCF73210.1 - 0.023 14.6 0.0 0.098 12.6 0.0 2.2 1 0 0 1 1 1 0 PQQ enzyme repeat PQQ_3 PF13570.6 CCF73210.1 - 0.027 15.0 0.6 3.7 8.2 0.0 3.5 4 0 0 4 4 4 0 PQQ-like domain fn3_4 PF16794.5 CCF73210.1 - 0.05 13.5 0.0 2.5 8.1 0.0 2.4 2 0 0 2 2 2 0 Fibronectin-III type domain Nup160 PF11715.8 CCF73210.1 - 0.058 12.0 0.6 2.7 6.5 0.1 2.8 1 1 1 3 3 3 0 Nucleoporin Nup120/160 DEAD PF00270.29 CCF73211.1 - 1.2e-37 129.4 0.9 2.2e-37 128.5 0.9 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73211.1 - 2e-24 86.0 1.0 1.5e-22 80.1 0.2 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF73211.1 - 1.8e-09 37.8 1.0 4.2e-08 33.4 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CCF73211.1 - 0.0012 18.1 0.8 0.0081 15.4 0.8 2.0 1 1 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 CCF73211.1 - 0.075 13.3 1.3 0.78 10.0 0.7 2.7 2 1 0 2 2 2 0 AAA domain T2SSE PF00437.20 CCF73211.1 - 0.084 11.9 0.1 0.15 11.1 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein ProRS-C_2 PF09181.10 CCF73211.1 - 0.11 12.6 0.1 0.28 11.4 0.1 1.6 1 0 0 1 1 1 0 Prolyl-tRNA synthetase, C-terminal DAP3 PF10236.9 CCF73212.1 - 1e-23 84.0 0.0 1.6e-22 80.1 0.0 2.1 1 1 0 1 1 1 1 Mitochondrial ribosomal death-associated protein 3 AAA_16 PF13191.6 CCF73212.1 - 0.004 17.5 0.0 0.012 16.1 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 CCF73212.1 - 0.0086 15.8 0.0 0.021 14.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF815 PF05673.13 CCF73212.1 - 0.012 14.8 0.0 0.019 14.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Glyco_hydro_88 PF07470.13 CCF73212.1 - 0.2 10.7 0.0 0.36 9.9 0.0 1.4 1 0 0 1 1 1 0 Glycosyl Hydrolase Family 88 AAA_30 PF13604.6 CCF73212.1 - 0.23 11.2 0.0 0.34 10.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain Pkinase PF00069.25 CCF73213.1 - 6.7e-46 156.8 0.0 9.6e-46 156.3 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73213.1 - 2.3e-21 76.2 0.0 3.3e-21 75.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase DUF2774 PF11242.8 CCF73215.1 - 0.019 15.2 0.2 0.025 14.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) ACT_5 PF13710.6 CCF73217.1 - 0.053 13.4 0.0 0.35 10.7 0.0 2.1 2 0 0 2 2 2 0 ACT domain Peptidase_M16 PF00675.20 CCF73218.1 - 3.2e-43 147.3 0.1 5.3e-43 146.5 0.1 1.4 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 CCF73218.1 - 4.4e-29 101.8 0.0 1.5e-27 96.8 0.0 2.3 2 0 0 2 2 2 1 Peptidase M16 inactive domain GCP_C_terminal PF04130.13 CCF73219.1 - 0.0085 15.6 0.6 0.0085 15.6 0.6 2.6 2 1 0 2 2 2 1 Gamma tubulin complex component C-terminal LPP PF04728.13 CCF73219.1 - 0.024 15.0 1.6 0.024 15.0 1.6 3.5 3 1 1 4 4 4 0 Lipoprotein leucine-zipper Prp19 PF08606.11 CCF73219.1 - 0.043 13.8 1.4 0.14 12.1 0.2 2.5 2 0 0 2 2 2 0 Prp19/Pso4-like Fez1 PF06818.15 CCF73219.1 - 6.5 7.2 35.9 7.9 6.9 6.4 2.9 1 1 1 2 2 2 0 Fez1 HAP1_N PF04849.13 CCF73219.1 - 8.2 5.5 38.9 9.1 5.4 17.0 3.1 1 1 0 2 2 2 0 HAP1 N-terminal conserved region DEAD_2 PF06733.15 CCF73221.1 - 8.1e-40 136.3 1.0 2.2e-39 134.9 1.0 1.8 1 1 0 1 1 1 1 DEAD_2 Helicase_C_2 PF13307.6 CCF73221.1 - 4.3e-35 121.4 0.0 7.7e-35 120.6 0.0 1.4 1 0 0 1 1 1 1 Helicase C-terminal domain HBB PF06777.11 CCF73221.1 - 2e-20 73.3 0.5 1.9e-14 53.8 0.0 2.6 2 0 0 2 2 2 2 Helical and beta-bridge domain ResIII PF04851.15 CCF73221.1 - 8.6e-09 35.6 0.0 0.00023 21.2 0.0 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit DEAD PF00270.29 CCF73221.1 - 0.00017 21.4 0.1 0.003 17.3 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase UBA_4 PF14555.6 CCF73222.1 - 6.6e-11 41.8 0.2 1.6e-10 40.6 0.2 1.6 1 0 0 1 1 1 1 UBA-like domain Thioredoxin_7 PF13899.6 CCF73222.1 - 0.081 13.1 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like BCS1_N PF08740.11 CCF73223.1 - 2.5e-32 112.4 0.1 3.7e-32 111.8 0.1 1.3 1 0 0 1 1 1 1 BCS1 N terminal AAA PF00004.29 CCF73223.1 - 1.4e-15 57.9 0.0 2.7e-15 56.9 0.0 1.5 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF73223.1 - 0.00013 22.4 0.0 0.0017 18.7 0.0 2.2 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 CCF73223.1 - 0.0034 17.4 0.0 0.0059 16.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ATPase PF06745.13 CCF73223.1 - 0.0041 16.5 0.0 0.0076 15.6 0.0 1.4 1 0 0 1 1 1 1 KaiC DUF815 PF05673.13 CCF73223.1 - 0.0047 16.1 0.0 0.0076 15.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_25 PF13481.6 CCF73223.1 - 0.0093 15.6 0.0 0.018 14.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 CCF73223.1 - 0.018 15.5 0.0 0.035 14.6 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RuvB_N PF05496.12 CCF73223.1 - 0.023 14.5 0.0 0.056 13.2 0.0 1.6 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 CCF73223.1 - 0.029 14.8 0.0 0.12 12.7 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 CCF73223.1 - 0.033 13.9 0.0 0.056 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 CCF73223.1 - 0.041 13.8 0.0 0.083 12.8 0.0 1.5 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_11 PF13086.6 CCF73223.1 - 0.043 13.6 0.0 0.067 13.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CCF73223.1 - 0.061 13.6 0.0 0.17 12.2 0.0 1.7 1 0 0 1 1 1 0 AAA domain PPV_E1_C PF00519.17 CCF73223.1 - 0.1 11.4 0.0 0.15 10.8 0.0 1.1 1 0 0 1 1 1 0 Papillomavirus helicase AAA_7 PF12775.7 CCF73223.1 - 0.11 12.0 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase_2 PF01637.18 CCF73223.1 - 0.14 12.1 0.0 0.24 11.3 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_17 PF13207.6 CCF73223.1 - 0.17 12.3 0.1 0.46 10.9 0.0 1.7 2 0 0 2 2 1 0 AAA domain NACHT PF05729.12 CCF73223.1 - 0.17 11.8 0.0 0.36 10.7 0.0 1.5 1 0 0 1 1 1 0 NACHT domain MORN PF02493.20 CCF73224.1 - 5.2e-75 243.1 104.2 2.4e-07 30.2 4.4 14.5 15 0 0 15 15 15 14 MORN repeat Peptidase_S55 PF05580.12 CCF73224.1 - 0.49 10.3 9.2 15 5.4 0.1 5.1 4 3 1 6 6 6 0 SpoIVB peptidase S55 Mpp10 PF04006.12 CCF73226.1 - 1.2e-35 123.0 29.0 1.2e-33 116.5 18.2 2.8 1 1 1 2 2 2 2 Mpp10 protein DUF919 PF06034.11 CCF73226.1 - 0.017 14.9 0.4 0.05 13.4 0.4 1.8 1 0 0 1 1 1 0 Nucleopolyhedrovirus protein of unknown function (DUF919) DUF2630 PF10944.8 CCF73226.1 - 1.4 9.5 6.6 21 5.6 0.2 3.2 2 1 0 2 2 2 0 Protein of unknown function (DUF2630) tRNA-synt_2b PF00587.25 CCF73227.1 - 6.4e-20 71.9 0.0 1e-19 71.2 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 CCF73227.1 - 0.008 16.4 0.5 0.022 15.0 0.5 1.8 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain SRP19 PF01922.17 CCF73229.1 - 7.7e-27 94.1 0.0 1e-26 93.7 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein MACPF PF01823.19 CCF73230.1 - 1.6e-46 159.0 1.1 1.6e-46 159.0 1.1 3.2 2 1 1 3 3 3 1 MAC/Perforin domain HGTP_anticodon PF03129.20 CCF73232.1 - 3.4e-21 75.2 0.0 9.5e-21 73.8 0.0 1.8 1 0 0 1 1 1 1 Anticodon binding domain ProRS-C_1 PF09180.11 CCF73232.1 - 2e-19 69.6 0.3 9.2e-18 64.2 0.0 2.6 2 0 0 2 2 2 1 Prolyl-tRNA synthetase, C-terminal tRNA-synt_2b PF00587.25 CCF73232.1 - 1.5e-18 67.4 0.0 3.4e-18 66.2 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA_edit PF04073.15 CCF73232.1 - 9.7e-18 64.4 0.0 1.7e-17 63.6 0.0 1.4 1 0 0 1 1 1 1 Aminoacyl-tRNA editing domain DNA_pol3_theta PF06440.11 CCF73232.1 - 0.035 13.8 0.9 0.13 11.9 0.0 2.5 3 0 0 3 3 3 0 DNA polymerase III, theta subunit Fucokinase PF07959.12 CCF73233.1 - 0.068 12.1 1.6 0.12 11.3 1.6 1.4 1 0 0 1 1 1 0 L-fucokinase bZIP_1 PF00170.21 CCF73234.1 - 0.019 15.0 3.0 0.028 14.5 0.3 2.2 2 0 0 2 2 2 0 bZIP transcription factor Pet191_N PF10203.9 CCF73234.1 - 0.036 14.4 1.7 0.06 13.7 1.7 1.4 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 CHCH PF06747.13 CCF73234.1 - 0.45 10.7 9.5 0.54 10.5 1.4 3.2 3 0 0 3 3 3 0 CHCH domain Phosphodiest PF01663.22 CCF73235.1 - 1.8e-12 47.5 2.1 2.3e-09 37.3 1.3 2.3 1 1 1 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 CCF73235.1 - 4.2e-06 26.3 0.2 8.9e-06 25.2 0.2 1.5 1 0 0 1 1 1 1 Metalloenzyme superfamily Sulfatase PF00884.23 CCF73235.1 - 0.0015 18.0 1.9 0.0018 17.7 0.0 2.1 2 1 1 3 3 3 1 Sulfatase Prenyltrans PF00432.21 CCF73236.1 - 9.8e-26 89.2 2.7 1.5e-09 37.4 0.0 5.2 5 0 0 5 5 5 3 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_C PF13243.6 CCF73236.1 - 0.00058 19.1 0.0 0.0063 15.7 0.0 2.2 1 1 2 3 3 3 1 Squalene-hopene cyclase C-terminal domain SQHop_cyclase_N PF13249.6 CCF73236.1 - 0.23 10.5 0.0 7.8 5.5 0.0 2.5 2 1 2 4 4 4 0 Squalene-hopene cyclase N-terminal domain Rab5ip PF07019.12 CCF73237.1 - 1.3e-06 28.9 4.4 1.7e-06 28.5 4.4 1.2 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) Fer2 PF00111.27 CCF73239.1 - 1.3e-10 41.1 1.2 1.6e-10 40.8 1.2 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain NifU PF01106.17 CCF73239.1 - 0.014 15.5 0.1 0.024 14.8 0.1 1.5 1 0 0 1 1 1 0 NifU-like domain Fer2_4 PF13510.6 CCF73239.1 - 0.12 12.4 2.1 1.2 9.2 2.1 2.6 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF5117 PF17148.4 CCF73240.1 - 0.012 15.5 0.0 0.023 14.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5117) ATPase_2 PF01637.18 CCF73241.1 - 0.078 12.9 2.6 0.1 12.5 2.6 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea CCDC-167 PF15188.6 CCF73241.1 - 0.18 12.1 4.8 0.32 11.4 4.8 1.4 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 Polysacc_synt_C PF14667.6 CCF73242.1 - 0.15 12.1 21.1 1.4 9.0 3.9 2.5 1 1 0 2 2 2 0 Polysaccharide biosynthesis C-terminal domain DUF389 PF04087.14 CCF73242.1 - 0.32 11.0 9.4 1.3 9.1 0.0 3.2 1 1 1 3 3 3 0 Domain of unknown function (DUF389) CytochromB561_N PF09786.9 CCF73242.1 - 0.56 9.1 1.4 0.74 8.7 1.4 1.1 1 0 0 1 1 1 0 Cytochrome B561, N terminal DUF3382 PF11862.8 CCF73242.1 - 1.5 9.1 6.3 6.7 7.1 1.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF3382) PHO4 PF01384.20 CCF73242.1 - 2.3 7.2 10.7 2.8 6.9 0.7 2.0 1 1 1 2 2 2 0 Phosphate transporter family TctA PF01970.16 CCF73242.1 - 2.5 6.7 16.7 11 4.6 16.6 1.8 1 1 0 1 1 1 0 Tripartite tricarboxylate transporter TctA family TssN PF17555.2 CCF73242.1 - 2.9 7.2 19.3 4.2 6.7 5.9 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssN FTR1 PF03239.14 CCF73242.1 - 4.5 6.4 10.6 0.28 10.3 1.1 2.7 2 1 0 3 3 3 0 Iron permease FTR1 family TauE PF01925.19 CCF73242.1 - 6.5 6.3 20.1 0.38 10.3 14.3 1.8 2 1 0 2 2 2 0 Sulfite exporter TauE/SafE AhpC-TSA PF00578.21 CCF73243.1 - 3.3e-31 107.8 0.0 4.6e-31 107.3 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CCF73243.1 - 3.1e-16 59.4 0.0 4.3e-16 59.0 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 CCF73243.1 - 2.7e-07 30.3 0.0 5.7e-07 29.3 0.0 1.6 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin Pro_isomerase PF00160.21 CCF73244.1 - 1.9e-27 96.4 0.0 2.4e-27 96.1 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Cpn10 PF00166.21 CCF73245.1 - 1.2e-26 92.6 0.0 1.3e-26 92.4 0.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Lactamase_B_2 PF12706.7 CCF73246.1 - 2.5e-08 33.7 0.0 4.5e-08 32.8 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CCF73246.1 - 0.00038 20.4 0.0 0.001 19.0 0.0 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain KA1 PF02149.19 CCF73246.1 - 0.033 14.0 0.1 0.08 12.8 0.1 1.6 1 0 0 1 1 1 0 Kinase associated domain 1 Band_7 PF01145.25 CCF73247.1 - 1.1e-23 84.2 1.1 1.4e-23 83.8 0.6 1.4 2 0 0 2 2 2 1 SPFH domain / Band 7 family YdfA_immunity PF12127.8 CCF73247.1 - 0.0029 16.7 1.8 0.0037 16.4 1.8 1.1 1 0 0 1 1 1 1 SigmaW regulon antibacterial Proteasome PF00227.26 CCF73248.1 - 2.3e-31 108.8 0.0 2.9e-31 108.5 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit FlaG PF03646.15 CCF73248.1 - 0.057 13.6 0.3 0.096 12.9 0.3 1.2 1 0 0 1 1 1 0 FlaG protein DUF4174 PF13778.6 CCF73248.1 - 0.14 12.7 0.1 0.22 12.0 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4174) SRP72 PF08492.12 CCF73249.1 - 6.2e-10 39.4 3.7 1.5e-09 38.1 3.7 1.7 1 0 0 1 1 1 1 SRP72 RNA-binding domain SRP_TPR_like PF17004.5 CCF73249.1 - 1.3e-08 34.8 10.4 2.2e-05 24.4 0.1 3.9 2 1 1 3 3 3 2 Putative TPR-like repeat TPR_6 PF13174.6 CCF73249.1 - 0.00025 21.5 11.2 1.5 9.6 0.2 5.8 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_16 PF13432.6 CCF73249.1 - 0.00041 20.9 0.2 18 6.1 0.0 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 CCF73249.1 - 0.00051 20.3 2.1 0.58 10.5 0.1 5.0 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_2 PF07719.17 CCF73249.1 - 0.00053 19.9 17.6 0.31 11.3 0.7 5.3 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 CCF73249.1 - 0.0031 18.2 0.1 4.8 8.3 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 CCF73249.1 - 0.03 14.3 4.1 0.26 11.4 0.1 3.7 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_8 PF13181.6 CCF73249.1 - 0.041 14.1 22.6 0.059 13.6 0.6 5.7 6 0 0 6 6 5 0 Tetratricopeptide repeat QueF_N PF14819.6 CCF73249.1 - 0.066 13.5 2.9 0.54 10.6 0.0 2.8 3 0 0 3 3 2 0 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ANAPC3 PF12895.7 CCF73249.1 - 0.072 13.3 24.9 0.4 10.9 0.1 5.4 5 1 0 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 CCF73249.1 - 0.12 12.2 19.9 0.97 9.4 0.5 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_19 PF14559.6 CCF73249.1 - 0.36 11.4 3.7 5.2 7.6 0.1 3.7 5 0 0 5 5 4 0 Tetratricopeptide repeat TPR_11 PF13414.6 CCF73249.1 - 1 9.1 7.3 3.4 7.4 0.2 3.4 3 0 0 3 3 3 0 TPR repeat MutS_V PF00488.21 CCF73250.1 - 7.3e-68 228.3 0.8 1.8e-67 227.1 0.8 1.7 1 0 0 1 1 1 1 MutS domain V MutS_I PF01624.20 CCF73250.1 - 5.7e-33 113.5 2.0 1.2e-32 112.5 0.1 2.3 2 0 0 2 2 2 1 MutS domain I MutS_III PF05192.18 CCF73250.1 - 1.3e-30 107.0 0.1 1.3e-30 107.0 0.1 2.4 2 1 0 2 2 2 1 MutS domain III MutS_II PF05188.17 CCF73250.1 - 1e-06 29.1 3.9 7.4e-06 26.3 0.0 3.1 3 0 0 3 3 3 1 MutS domain II MutS_IV PF05190.18 CCF73250.1 - 0.00046 20.5 1.1 0.0012 19.1 1.1 1.8 1 0 0 1 1 1 1 MutS family domain IV AAA_23 PF13476.6 CCF73250.1 - 0.47 10.9 0.0 0.47 10.9 0.0 3.0 2 1 0 2 2 2 0 AAA domain tRNA_int_endo PF01974.17 CCF73251.1 - 7.2e-16 58.0 0.0 8.4e-16 57.8 0.0 1.1 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain Utp11 PF03998.13 CCF73252.1 - 6e-24 85.3 17.4 1.6e-22 80.7 9.6 2.0 1 1 1 2 2 2 2 Utp11 protein SLATT_5 PF18160.1 CCF73252.1 - 0.0031 16.9 0.5 0.0049 16.2 0.5 1.3 1 0 0 1 1 1 1 SMODS and SLOG-associating 2TM effector domain family 5 CLTH PF10607.9 CCF73253.1 - 1.4e-19 70.4 4.0 2.1e-19 69.9 4.0 1.2 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain Thioredoxin_2 PF13098.6 CCF73253.1 - 0.026 15.0 0.0 0.049 14.1 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like domain Utp12 PF04003.12 CCF73254.1 - 4.7e-14 52.6 1.7 6.2e-14 52.2 1.7 1.2 1 0 0 1 1 1 1 Dip2/Utp12 Family Ribosomal_L36 PF00444.18 CCF73254.1 - 1.3e-07 31.7 0.8 9.5e-07 28.9 0.1 2.3 2 0 0 2 2 2 1 Ribosomal protein L36 Ribosomal_S11 PF00411.19 CCF73255.1 - 2.2e-05 24.8 0.2 2.8e-05 24.5 0.2 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_L18p PF00861.22 CCF73255.1 - 0.00049 20.5 0.0 0.00089 19.6 0.0 1.5 1 1 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NifU_N PF01592.16 CCF73256.1 - 7.3e-48 162.0 0.2 1.1e-47 161.3 0.2 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain RNase_P_Rpp14 PF01900.19 CCF73256.1 - 7.3e-16 58.3 1.5 1.3e-15 57.5 1.5 1.4 1 0 0 1 1 1 1 Rpp14/Pop5 family 6PGD PF00393.19 CCF73257.1 - 4.1e-98 328.3 1.3 4.9e-98 328.1 1.3 1.1 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 CCF73257.1 - 7.9e-29 100.9 0.0 1.3e-28 100.1 0.0 1.4 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase UPF0240 PF06784.11 CCF73257.1 - 0.082 13.0 0.1 0.32 11.0 0.0 1.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0240) Actin PF00022.19 CCF73258.1 - 3.4e-58 197.2 0.0 1.1e-57 195.5 0.0 1.8 1 1 0 1 1 1 1 Actin HMG_box_2 PF09011.10 CCF73259.1 - 0.066 13.8 0.4 0.16 12.6 0.4 1.7 1 0 0 1 1 1 0 HMG-box domain MMR_HSR1 PF01926.23 CCF73261.1 - 3.9e-15 55.9 0.0 6.5e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CCF73261.1 - 0.0003 20.7 0.0 0.0067 16.3 0.0 2.4 2 1 0 2 2 2 1 RsgA GTPase Septin PF00735.18 CCF73261.1 - 0.00036 19.9 0.0 0.00061 19.2 0.0 1.4 1 0 0 1 1 1 1 Septin GTP_EFTU PF00009.27 CCF73261.1 - 0.0004 20.0 0.0 0.11 12.0 0.0 2.3 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 CCF73261.1 - 0.00082 19.5 0.1 0.22 11.6 0.2 2.3 1 1 1 2 2 2 2 Dynamin family FeoB_N PF02421.18 CCF73261.1 - 0.0023 17.5 0.2 0.12 11.8 0.0 2.5 2 1 0 2 2 2 1 Ferrous iron transport protein B TniB PF05621.11 CCF73261.1 - 0.017 14.5 0.0 0.028 13.8 0.0 1.2 1 0 0 1 1 1 0 Bacterial TniB protein DUF463 PF04317.12 CCF73261.1 - 0.064 12.2 0.0 0.094 11.6 0.0 1.2 1 0 0 1 1 1 0 YcjX-like family, DUF463 SRPRB PF09439.10 CCF73261.1 - 0.084 12.3 0.0 0.25 10.8 0.0 2.0 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ribosomal_L13e PF01294.18 CCF73262.1 - 2.2e-66 223.1 2.6 2.6e-66 222.9 2.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L13e Sigma70_r4 PF04545.16 CCF73262.1 - 0.043 13.4 0.0 0.15 11.6 0.0 1.9 2 0 0 2 2 2 0 Sigma-70, region 4 Ribosomal_S9 PF00380.19 CCF73263.1 - 7.6e-33 113.6 0.1 8.9e-33 113.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 ATP-synt PF00231.19 CCF73264.1 - 7.1e-79 265.4 7.9 8.1e-79 265.2 7.9 1.0 1 0 0 1 1 1 1 ATP synthase WD40 PF00400.32 CCF73265.1 - 2.5e-23 81.9 18.9 1.6e-06 28.7 0.0 6.9 5 1 1 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF73265.1 - 9.6e-15 54.7 0.2 0.00011 22.5 0.1 4.5 2 2 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain LisH_TPL PF17814.1 CCF73265.1 - 4.5e-08 32.6 0.3 8.1e-08 31.8 0.3 1.5 1 0 0 1 1 1 1 LisH-like dimerisation domain eIF2A PF08662.11 CCF73265.1 - 9e-07 29.0 0.3 0.0067 16.3 0.0 2.6 1 1 0 2 2 2 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 CCF73265.1 - 0.001 18.1 0.1 1.2 8.0 0.0 3.1 2 1 1 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein LisH PF08513.11 CCF73265.1 - 0.0038 17.1 0.1 0.0082 16.1 0.1 1.6 1 0 0 1 1 1 1 LisH Nup160 PF11715.8 CCF73265.1 - 0.0058 15.3 0.4 1.2 7.7 0.1 2.8 1 1 2 3 3 3 2 Nucleoporin Nup120/160 Ndc80_HEC PF03801.13 CCF73266.1 - 6.8e-11 42.0 0.2 2.4e-10 40.3 0.2 1.9 1 0 0 1 1 1 1 HEC/Ndc80p family Spc7 PF08317.11 CCF73266.1 - 1.9e-05 23.7 38.2 0.00033 19.6 15.7 3.3 2 1 1 3 3 3 3 Spc7 kinetochore protein GAS PF13851.6 CCF73266.1 - 0.0003 20.2 42.9 0.0075 15.6 16.6 3.3 2 1 1 3 3 3 2 Growth-arrest specific micro-tubule binding MAD PF05557.13 CCF73266.1 - 0.0004 18.9 38.4 0.099 11.0 13.5 3.1 2 1 1 3 3 3 3 Mitotic checkpoint protein NPV_P10 PF05531.12 CCF73266.1 - 0.0091 16.4 4.1 0.0091 16.4 4.1 5.3 3 2 1 4 4 3 1 Nucleopolyhedrovirus P10 protein WEMBL PF05701.11 CCF73266.1 - 0.045 12.5 33.9 0.017 13.8 16.1 2.2 2 0 0 2 2 2 0 Weak chloroplast movement under blue light Fez1 PF06818.15 CCF73266.1 - 0.12 12.8 33.7 1.2 9.6 17.7 3.0 2 1 0 2 2 2 0 Fez1 DUF2524 PF10732.9 CCF73266.1 - 0.3 11.4 14.9 0.21 11.9 1.1 3.9 2 1 1 3 3 3 0 Protein of unknown function (DUF2524) WD40_alt PF14077.6 CCF73266.1 - 0.48 10.3 7.0 2.3 8.1 0.0 3.5 3 0 0 3 3 3 0 Alternative WD40 repeat motif CENP-F_leu_zip PF10473.9 CCF73266.1 - 1.1 9.3 36.8 0.52 10.3 4.8 3.5 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 IFT57 PF10498.9 CCF73266.1 - 1.1 8.2 37.9 0.24 10.3 3.9 3.7 1 1 2 3 3 3 0 Intra-flagellar transport protein 57 Tropomyosin PF00261.20 CCF73266.1 - 1.5 8.1 30.2 0.051 12.9 4.9 2.8 2 1 0 2 2 2 0 Tropomyosin Exonuc_VII_L PF02601.15 CCF73266.1 - 1.7 8.1 31.8 2.3 7.7 12.3 2.4 1 1 0 2 2 2 0 Exonuclease VII, large subunit DUF1192 PF06698.11 CCF73266.1 - 2 8.6 6.3 20 5.3 0.0 3.6 2 1 0 3 3 3 0 Protein of unknown function (DUF1192) CC2-LZ PF16516.5 CCF73266.1 - 2.9 8.3 27.5 0.13 12.7 2.7 4.8 2 2 2 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator Filament PF00038.21 CCF73266.1 - 3.9 6.9 35.5 22 4.5 32.0 2.9 2 1 0 2 2 2 0 Intermediate filament protein COG2 PF06148.11 CCF73266.1 - 7.5 6.6 26.8 2.7 8.1 5.4 4.0 2 2 2 4 4 4 0 COG (conserved oligomeric Golgi) complex component, COG2 DASH_Duo1 PF08651.10 CCF73266.1 - 8.7 6.2 32.7 0.019 14.7 4.3 5.6 4 2 1 5 5 5 0 DASH complex subunit Duo1 Bromodomain PF00439.25 CCF73271.1 - 3.6e-06 27.0 0.3 1.1e-05 25.4 0.3 1.9 1 0 0 1 1 1 1 Bromodomain Fer2_3 PF13085.6 CCF73272.1 - 2e-32 111.4 0.0 3.5e-32 110.7 0.0 1.4 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 CCF73272.1 - 3e-08 34.1 8.3 3e-08 34.1 8.3 2.2 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 CCF73272.1 - 3.7e-06 26.9 5.7 3.7e-06 26.9 5.7 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 CCF73272.1 - 2.2e-05 24.8 13.7 0.00051 20.4 12.5 2.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer2 PF00111.27 CCF73272.1 - 0.005 16.8 0.3 0.005 16.8 0.3 2.9 3 0 0 3 3 3 1 2Fe-2S iron-sulfur cluster binding domain Fer4_18 PF13746.6 CCF73272.1 - 0.34 11.1 0.1 0.34 11.1 0.1 3.2 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_7 PF12838.7 CCF73272.1 - 3.9 8.2 18.1 0.42 11.3 10.0 3.1 2 2 1 3 3 3 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 CCF73272.1 - 6.5 7.0 14.6 2.4 8.4 9.5 2.7 2 1 0 2 2 2 0 4Fe-4S dicluster domain RF-1 PF00472.20 CCF73273.1 - 5.9e-20 71.3 3.5 1.4e-19 70.2 3.5 1.5 1 0 0 1 1 1 1 RF-1 domain DEAD PF00270.29 CCF73273.1 - 4.8e-19 68.8 0.0 1.6e-18 67.1 0.0 1.9 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73273.1 - 1.4e-10 41.5 1.3 4.9e-08 33.3 0.0 4.3 4 0 0 4 4 4 1 Helicase conserved C-terminal domain Methyltransf_31 PF13847.6 CCF73273.1 - 8e-05 22.5 7.1 0.0012 18.7 0.2 3.5 3 1 0 3 3 3 1 Methyltransferase domain Microtub_bd PF16796.5 CCF73273.1 - 0.0022 17.9 0.3 0.01 15.8 0.1 2.3 2 0 0 2 2 2 1 Microtubule binding CMS1 PF14617.6 CCF73273.1 - 0.0041 16.5 0.0 0.0041 16.5 0.0 1.9 2 0 0 2 2 2 1 U3-containing 90S pre-ribosomal complex subunit Atypical_Card PF18461.1 CCF73273.1 - 0.028 14.6 0.2 0.89 9.8 0.0 3.0 2 0 0 2 2 2 0 Atypical caspase recruitment domain Methyltransf_3 PF01596.17 CCF73273.1 - 0.077 12.2 0.2 0.2 10.8 0.2 1.7 1 0 0 1 1 1 0 O-methyltransferase BCIP PF13862.6 CCF73274.1 - 1.5e-30 106.5 0.2 1.5e-30 106.5 0.2 1.7 2 0 0 2 2 2 1 p21-C-terminal region-binding protein Pico_P2B PF01552.17 CCF73274.1 - 0.066 13.4 0.1 0.21 11.8 0.0 1.9 2 0 0 2 2 2 0 Picornavirus 2B protein Vps39_2 PF10367.9 CCF73276.1 - 0.0014 19.1 0.1 0.0065 16.9 0.0 2.2 2 0 0 2 2 2 1 Vacuolar sorting protein 39 domain 2 ANAPC3 PF12895.7 CCF73276.1 - 0.0027 17.9 0.8 0.48 10.7 0.0 3.8 4 1 0 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 DUF3704 PF12488.8 CCF73276.1 - 0.14 11.8 0.3 0.35 10.6 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3704) Metallophos PF00149.28 CCF73277.1 - 2.7e-23 83.5 0.2 6.5e-23 82.3 0.2 1.7 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase EF-hand_7 PF13499.6 CCF73277.1 - 8.1e-20 71.0 10.5 5.1e-08 33.3 0.3 4.0 3 1 1 4 4 4 4 EF-hand domain pair EF-hand_8 PF13833.6 CCF73277.1 - 5.3e-08 32.6 7.0 0.00017 21.3 0.8 5.3 5 1 1 6 6 6 1 EF-hand domain pair EF-hand_6 PF13405.6 CCF73277.1 - 1.4e-07 30.9 8.0 2.6 8.2 0.0 5.9 5 0 0 5 5 5 3 EF-hand domain EF-hand_1 PF00036.32 CCF73277.1 - 3.8e-07 29.2 11.7 0.17 11.5 0.0 6.0 6 0 0 6 6 6 2 EF hand PPP5 PF08321.12 CCF73277.1 - 0.0033 17.7 0.1 0.49 10.7 0.0 2.9 2 0 0 2 2 2 1 PPP5 TPR repeat region IQ PF00612.27 CCF73277.1 - 0.0033 17.1 0.5 0.0089 15.7 0.5 1.8 1 0 0 1 1 1 1 IQ calmodulin-binding motif EF-hand_11 PF08976.11 CCF73277.1 - 0.022 15.7 1.6 5 8.1 0.1 3.4 2 1 1 3 3 3 0 EF-hand domain Erf4 PF10256.9 CCF73277.1 - 0.091 12.9 3.7 47 4.1 0.0 4.4 5 0 0 5 5 5 0 Golgin subfamily A member 7/ERF4 family EF-hand_5 PF13202.6 CCF73277.1 - 8.5 6.1 10.5 1.3 8.6 0.0 4.6 6 0 0 6 6 6 0 EF hand TPR_1 PF00515.28 CCF73278.1 - 3.1e-08 33.1 3.4 3.7e-06 26.5 0.1 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 CCF73278.1 - 3.5e-06 26.7 4.7 0.0075 16.3 0.0 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF73278.1 - 4e-05 23.5 5.5 0.0057 16.8 0.2 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 CCF73278.1 - 4.2e-05 23.3 0.5 0.026 14.5 0.0 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 CCF73278.1 - 5.6e-05 22.7 0.2 0.37 10.5 0.0 3.1 2 1 1 3 3 3 2 TPR repeat TPR_12 PF13424.6 CCF73278.1 - 0.00013 22.1 0.3 0.00094 19.4 0.1 2.5 2 1 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 CCF73278.1 - 0.00046 20.2 2.4 0.012 15.7 0.1 2.8 3 0 0 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat DUF2989 PF11207.8 CCF73278.1 - 0.0011 18.7 2.3 0.15 11.8 0.3 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF2989) TPR_6 PF13174.6 CCF73278.1 - 0.0079 16.8 0.1 9.2 7.1 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF73278.1 - 0.015 15.5 2.6 0.031 14.5 0.2 2.6 2 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 CCF73278.1 - 0.064 13.8 0.0 0.24 11.9 0.0 2.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TMEM208_SND2 PF05620.11 CCF73278.1 - 2.4 7.9 11.3 0.68 9.7 0.6 2.6 2 1 1 3 3 3 0 SRP-independent targeting protein 2/TMEM208 Acyltransferase PF01553.21 CCF73279.1 - 1.4e-15 57.1 0.0 1.4e-14 53.9 0.0 2.5 2 1 0 2 2 2 1 Acyltransferase Rsm22 PF09243.10 CCF73280.1 - 4.6e-63 213.1 0.1 7.5e-62 209.1 0.0 2.6 2 1 0 2 2 2 1 Mitochondrial small ribosomal subunit Rsm22 AhpC-TSA PF00578.21 CCF73281.1 - 1.2e-22 80.1 0.0 1.5e-22 79.8 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 CCF73281.1 - 4e-18 65.5 0.0 6.9e-18 64.8 0.0 1.3 1 0 0 1 1 1 1 Redoxin SHS2_Rpb7-N PF03876.17 CCF73282.1 - 7e-15 55.2 0.0 1.2e-14 54.4 0.0 1.4 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 CCF73282.1 - 3.9e-08 33.5 0.0 7.5e-08 32.6 0.0 1.5 1 0 0 1 1 1 1 S1 RNA binding domain DUF2220 PF09983.9 CCF73284.1 - 0.00018 20.9 0.0 0.0003 20.2 0.0 1.4 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria C-term(DUF2220) TP6A_N PF04406.14 CCF73284.1 - 0.00091 19.2 0.2 0.0021 18.0 0.2 1.6 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF2399 PF09664.10 CCF73284.1 - 0.027 14.4 0.0 0.038 13.9 0.0 1.4 1 1 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) EF-hand_7 PF13499.6 CCF73285.1 - 6.8e-26 90.5 7.2 5e-14 52.5 2.5 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 CCF73285.1 - 1.2e-25 87.1 14.1 7.4e-08 31.4 2.2 4.4 4 1 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 CCF73285.1 - 1.4e-23 80.8 8.5 6.4e-07 28.8 0.1 4.6 4 1 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 CCF73285.1 - 1.5e-19 69.6 8.4 6.6e-10 38.7 0.9 3.2 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 CCF73285.1 - 1.2e-15 57.5 0.2 1.2e-06 28.8 0.0 2.3 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 CCF73285.1 - 4e-13 48.2 6.9 1e-05 24.8 1.0 4.4 4 0 0 4 4 4 3 EF hand EF-hand_4 PF12763.7 CCF73285.1 - 2.3e-06 27.5 4.4 0.016 15.2 0.1 2.6 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 CCF73285.1 - 0.00026 20.9 0.3 1 9.3 0.0 3.1 2 1 1 3 3 3 1 Caleosin related protein EF-hand_14 PF17959.1 CCF73285.1 - 0.00078 19.7 1.8 0.13 12.6 0.5 2.8 2 2 0 2 2 2 1 EF-hand domain DUF5580 PF17743.1 CCF73285.1 - 0.032 12.8 0.0 0.045 12.3 0.0 1.3 1 1 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_10 PF14788.6 CCF73285.1 - 0.036 13.9 3.7 0.046 13.6 0.1 2.6 2 1 0 2 2 2 0 EF hand EF-hand_11 PF08976.11 CCF73285.1 - 0.053 14.4 0.5 0.73 10.7 0.3 2.3 1 1 1 2 2 2 0 EF-hand domain RST PF12174.8 CCF73285.1 - 0.058 13.3 0.5 0.94 9.4 0.0 2.7 2 2 1 3 3 3 0 RCD1-SRO-TAF4 (RST) plant domain PL48 PF15903.5 CCF73285.1 - 0.069 12.1 0.2 0.15 11.0 0.0 1.6 2 0 0 2 2 2 0 Filopodia upregulated, FAM65 Homeodomain PF00046.29 CCF73285.1 - 0.13 12.1 1.0 5.1 7.0 0.0 3.0 3 1 1 4 4 4 0 Homeodomain HECT PF00632.25 CCF73286.1 - 4.8e-85 285.7 0.0 1.3e-84 284.3 0.0 1.8 2 0 0 2 2 2 1 HECT-domain (ubiquitin-transferase) DUF908 PF06012.12 CCF73286.1 - 9.2e-34 117.4 6.0 1.3e-16 61.0 0.5 2.6 2 0 0 2 2 2 2 Domain of Unknown Function (DUF908) DUF913 PF06025.12 CCF73286.1 - 3.2e-26 92.2 0.0 6.7e-24 84.5 0.0 2.5 1 1 0 1 1 1 1 Domain of Unknown Function (DUF913) UBM PF14377.6 CCF73286.1 - 7.3e-05 22.1 0.1 0.00062 19.1 0.0 2.6 2 0 0 2 2 2 1 Ubiquitin binding region WD40 PF00400.32 CCF73288.1 - 1.7e-22 79.2 9.1 4.1e-05 24.2 0.2 6.3 7 0 0 7 7 7 5 WD domain, G-beta repeat Sof1 PF04158.14 CCF73288.1 - 2e-20 72.8 11.2 3.2e-20 72.2 11.2 1.3 1 0 0 1 1 1 1 Sof1-like domain ANAPC4_WD40 PF12894.7 CCF73288.1 - 0.0036 17.5 0.0 7.5 6.9 0.0 3.6 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain CelTOS PF18659.1 CCF73289.1 - 2.2e-25 89.4 1.0 2.8e-25 89.1 1.0 1.1 1 0 0 1 1 1 1 Cell-traversal protein for ookinetes and sporozoites DLP_helical PF18709.1 CCF73289.1 - 0.0087 15.3 0.1 0.01 15.1 0.1 1.1 1 0 0 1 1 1 1 Dynamin-like helical domain Voldacs PF03517.13 CCF73289.1 - 0.083 13.0 2.1 0.095 12.8 2.1 1.5 1 1 0 1 1 1 0 Regulator of volume decrease after cellular swelling DUF760 PF05542.11 CCF73289.1 - 0.19 12.1 0.0 0.3 11.5 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF760) RNA_pol_Rpb8 PF03870.15 CCF73290.1 - 6.6e-37 126.8 0.1 7.4e-37 126.6 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb8 Pox_L3_FP4 PF03339.14 CCF73290.1 - 0.028 13.4 0.1 0.11 11.5 0.0 1.9 1 1 1 2 2 2 0 Poxvirus L3/FP4 protein DUF4623 PF15416.6 CCF73290.1 - 0.041 12.5 0.0 0.05 12.2 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4623) Sulf_transp PF04143.14 CCF73290.1 - 0.054 13.1 0.0 0.057 13.0 0.0 1.0 1 0 0 1 1 1 0 Sulphur transport Dynein_light PF01221.18 CCF73291.1 - 6.3e-38 129.0 0.8 7e-38 128.8 0.8 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 PCI PF01399.27 CCF73292.1 - 6.5e-09 36.3 1.9 3.9e-08 33.7 0.1 3.3 3 0 0 3 3 3 1 PCI domain S1 PF00575.23 CCF73293.1 - 0.0022 18.3 0.5 39 4.7 0.0 4.7 4 1 0 4 4 4 1 S1 RNA binding domain TPR_14 PF13428.6 CCF73293.1 - 0.0032 18.2 0.0 3 8.9 0.0 3.7 3 1 1 4 4 4 1 Tetratricopeptide repeat Suf PF05843.14 CCF73293.1 - 0.014 15.4 11.1 0.32 10.9 2.5 3.9 2 1 1 3 3 3 0 Suppressor of forked protein (Suf) RRM_1 PF00076.22 CCF73294.1 - 2.9e-16 59.1 0.0 4.5e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF73294.1 - 0.0061 16.7 0.0 0.013 15.6 0.0 1.6 1 1 0 1 1 1 1 RNA recognition motif PPTA PF01239.22 CCF73294.1 - 0.029 14.1 0.0 0.057 13.2 0.0 1.5 1 0 0 1 1 1 0 Protein prenyltransferase alpha subunit repeat DUF1314 PF07013.11 CCF73294.1 - 0.093 12.6 0.0 0.13 12.2 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) DUF4573 PF15140.6 CCF73295.1 - 0.002 18.0 6.9 0.25 11.1 0.7 2.6 2 1 1 3 3 3 2 Domain of unknown function (DUF4573) WD40_like PF17005.5 CCF73296.1 - 0.00033 20.1 1.6 0.15 11.4 0.2 2.3 2 0 0 2 2 2 2 WD40-like domain Cpn60_TCP1 PF00118.24 CCF73297.1 - 1.4e-149 498.9 14.0 1.8e-149 498.6 14.0 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Utp21 PF04192.12 CCF73298.1 - 5.9e-15 55.4 0.3 1e-14 54.6 0.3 1.3 1 0 0 1 1 1 1 Utp21 specific WD40 associated putative domain DEFB136 PF17333.2 CCF73298.1 - 0.11 12.4 1.1 1 9.4 0.0 2.9 2 0 0 2 2 2 0 Beta defensin 136 WD40 PF00400.32 CCF73298.1 - 0.12 13.3 14.5 35 5.5 0.1 7.3 7 0 0 7 7 7 0 WD domain, G-beta repeat Peptidase_S31 PF05578.12 CCF73299.1 - 0.029 13.9 0.0 0.065 12.7 0.0 1.5 1 0 0 1 1 1 0 Pestivirus NS3 polyprotein peptidase S31 Pro_isomerase PF00160.21 CCF73300.1 - 1.2e-49 168.6 0.6 1.4e-49 168.4 0.6 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD mRNA_triPase PF02940.15 CCF73301.1 - 5.4e-31 108.0 1.7 8.5e-31 107.4 1.7 1.3 1 0 0 1 1 1 1 mRNA capping enzyme, beta chain Filament PF00038.21 CCF73302.1 - 0.0017 18.0 35.3 0.48 10.0 19.1 3.1 1 1 2 3 3 3 3 Intermediate filament protein CENP-F_leu_zip PF10473.9 CCF73302.1 - 0.038 14.0 35.8 0.016 15.3 14.6 3.9 1 1 1 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 CCF73302.1 - 0.064 13.3 17.8 0.023 14.7 5.1 3.6 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) KASH_CCD PF14662.6 CCF73302.1 - 0.72 9.6 33.3 2 8.2 17.5 2.9 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Macoilin PF09726.9 CCF73302.1 - 1.2 7.6 29.9 0.029 12.9 12.3 2.1 1 1 1 2 2 2 0 Macoilin family DUF4407 PF14362.6 CCF73302.1 - 1.6 8.0 15.9 0.9 8.8 7.9 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) CALCOCO1 PF07888.11 CCF73302.1 - 6.1 5.6 29.3 4.7 6.0 3.3 2.1 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like Fez1 PF06818.15 CCF73302.1 - 7.6 6.9 33.2 0.077 13.4 17.0 3.3 1 1 3 4 4 4 0 Fez1 Spc7 PF08317.11 CCF73302.1 - 8.9 5.1 37.3 1.8 7.3 16.9 3.7 1 1 3 4 4 4 0 Spc7 kinetochore protein MBOAT PF03062.19 CCF73303.1 - 4.7e-19 69.0 22.2 5.8e-19 68.7 22.0 1.3 1 1 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family Thg1 PF04446.12 CCF73304.1 - 3.4e-46 156.4 0.1 5e-46 155.8 0.1 1.3 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 CCF73304.1 - 2.6e-34 118.0 4.6 2.6e-34 118.0 4.6 1.6 1 1 0 1 1 1 1 Thg1 C terminal domain Laminin_G_3 PF13385.6 CCF73305.1 - 2.3e-12 47.3 0.1 1.2e-10 41.7 0.0 2.2 1 1 1 2 2 2 2 Concanavalin A-like lectin/glucanases superfamily Toxin_R_bind_N PF07953.12 CCF73305.1 - 0.0047 16.7 1.2 0.23 11.2 0.1 2.2 1 1 1 2 2 2 2 Clostridium neurotoxin, N-terminal receptor binding Rgp1 PF08737.10 CCF73306.1 - 2.8e-05 23.5 0.4 5.3e-05 22.6 0.4 1.3 1 0 0 1 1 1 1 Rgp1 Arrestin_N PF00339.29 CCF73306.1 - 0.077 13.0 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Arrestin (or S-antigen), N-terminal domain zf-RING_11 PF17123.5 CCF73307.1 - 0.0016 18.2 2.0 0.0058 16.4 2.0 2.0 1 0 0 1 1 1 1 RING-like zinc finger WD40 PF00400.32 CCF73307.1 - 0.0018 19.1 0.0 0.025 15.5 0.0 2.9 2 0 0 2 2 2 1 WD domain, G-beta repeat Peptidase_M4 PF01447.18 CCF73308.1 - 1.1 9.7 4.9 1.3 9.5 1.7 2.2 1 1 1 2 2 2 0 Thermolysin metallopeptidase, catalytic domain Integrin_b_cyt PF08725.11 CCF73309.1 - 0.2 11.4 0.4 24 4.7 0.1 2.4 2 0 0 2 2 2 0 Integrin beta cytoplasmic domain Rsm1 PF08600.10 CCF73309.1 - 0.96 9.6 2.8 0.45 10.7 0.1 1.8 2 0 0 2 2 2 0 Rsm1-like ABC_tran PF00005.27 CCF73310.1 - 8.7e-31 107.3 0.0 1.5e-30 106.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CCF73310.1 - 3.6e-23 82.6 8.7 1.6e-18 67.3 1.8 2.3 2 0 0 2 2 2 2 ABC transporter transmembrane region SMC_N PF02463.19 CCF73310.1 - 8.9e-07 28.6 2.1 4.5e-05 23.0 0.1 2.3 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CCF73310.1 - 0.0003 20.5 0.0 0.00099 18.8 0.1 1.8 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_21 PF13304.6 CCF73310.1 - 0.0014 18.5 0.6 0.091 12.6 0.3 2.4 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Pox_A32 PF04665.12 CCF73310.1 - 0.0092 15.5 0.0 0.016 14.7 0.0 1.3 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_16 PF13191.6 CCF73310.1 - 0.0094 16.3 0.0 0.05 14.0 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain DEAD PF00270.29 CCF73310.1 - 0.055 13.2 0.1 3.6 7.3 0.0 2.4 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_22 PF13401.6 CCF73310.1 - 0.076 13.3 0.4 0.81 10.0 0.2 2.6 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 CCF73310.1 - 0.21 11.2 1.0 1.3 8.5 0.2 2.1 2 0 0 2 2 2 0 AAA domain 2-oxoacid_dh PF00198.23 CCF73311.1 - 1.8e-77 259.9 0.0 2.4e-77 259.5 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 CCF73311.1 - 3.5e-15 55.6 0.5 2.7e-14 52.7 0.3 2.2 1 1 1 2 2 2 1 Biotin-requiring enzyme UCH PF00443.29 CCF73312.1 - 7e-07 29.0 0.0 2.4e-06 27.3 0.0 1.9 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase APG6_N PF17675.1 CCF73312.1 - 0.16 12.5 2.2 0.57 10.7 2.2 1.9 1 0 0 1 1 1 0 Apg6 coiled-coil region KfrA_N PF11740.8 CCF73312.1 - 1.2 9.8 5.1 2.6 8.8 5.1 1.5 1 0 0 1 1 1 0 Plasmid replication region DNA-binding N-term GSH_synth_ATP PF03917.17 CCF73313.1 - 1.4e-33 116.2 0.0 1.8e-33 115.8 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 CCF73313.1 - 4.8e-13 49.4 0.1 1.3e-12 48.0 0.0 1.8 1 1 1 2 2 2 1 Eukaryotic glutathione synthase DUF4930 PF16284.5 CCF73314.1 - 0.15 12.0 0.2 17 5.4 0.0 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4930) Importin_rep_4 PF18808.1 CCF73315.1 - 1.1e-12 48.1 0.1 4.8e-11 42.8 0.0 3.6 4 0 0 4 4 4 1 Importin repeat Vac14_Fab1_bd PF12755.7 CCF73315.1 - 2.5e-10 40.8 5.9 8.2e-05 23.1 0.0 7.3 6 3 2 8 8 7 2 Vacuolar 14 Fab1-binding region HEAT PF02985.22 CCF73315.1 - 1.3e-09 37.5 7.7 0.0045 17.1 0.0 9.5 11 0 0 11 11 11 2 HEAT repeat HEAT_2 PF13646.6 CCF73315.1 - 3.8e-09 36.8 1.2 0.00036 20.9 0.0 6.0 6 1 2 8 8 8 2 HEAT repeats HEAT_EZ PF13513.6 CCF73315.1 - 1.8e-07 31.5 0.0 0.00018 21.9 0.0 4.7 4 0 0 4 4 4 1 HEAT-like repeat RTP1_C1 PF10363.9 CCF73315.1 - 6.8e-06 26.2 3.1 0.0088 16.2 0.0 4.2 4 0 0 4 4 4 2 Required for nuclear transport of RNA pol II C-terminus 1 CLASP_N PF12348.8 CCF73315.1 - 0.00024 20.8 13.2 0.079 12.5 1.9 5.3 4 1 2 6 6 6 1 CLASP N terminal Arm PF00514.23 CCF73315.1 - 0.019 15.0 0.9 49 4.2 0.0 5.3 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat RMP PF14996.6 CCF73315.1 - 0.033 14.4 1.5 0.069 13.4 1.5 1.5 1 0 0 1 1 1 0 Retinal Maintenance Fanconi_A PF03511.14 CCF73315.1 - 0.14 12.1 0.0 0.49 10.4 0.0 1.9 1 0 0 1 1 1 0 Fanconi anaemia group A protein NPA PF16469.5 CCF73315.1 - 0.18 12.4 1.9 1.9 9.1 0.5 2.8 2 0 0 2 2 2 0 Nematode polyprotein allergen ABA-1 IBN_N PF03810.19 CCF73315.1 - 0.96 9.4 6.7 1 9.3 2.1 3.5 4 0 0 4 4 4 0 Importin-beta N-terminal domain APG12 PF04110.13 CCF73317.1 - 0.022 15.2 4.7 0.87 10.0 0.1 3.4 3 1 0 3 3 3 0 Ubiquitin-like autophagy protein Apg12 SET PF00856.28 CCF73318.1 - 1.2e-14 55.1 1.2 3.9e-14 53.4 0.0 2.5 2 2 0 2 2 2 1 SET domain TFIID_30kDa PF03540.13 CCF73319.1 - 0.037 14.0 0.0 0.057 13.4 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID 23-30kDa subunit MMR_HSR1_Xtn PF16897.5 CCF73320.1 - 1.1e-37 128.2 0.1 2e-37 127.4 0.1 1.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain TGS PF02824.21 CCF73320.1 - 1.3e-23 82.8 0.1 2.3e-23 82.0 0.1 1.5 1 0 0 1 1 1 1 TGS domain MMR_HSR1 PF01926.23 CCF73320.1 - 2.1e-21 76.1 0.0 4.9e-21 74.9 0.0 1.6 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF73320.1 - 3e-11 43.1 0.0 7.9e-11 41.7 0.0 1.7 2 0 0 2 2 2 1 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF73320.1 - 2e-05 24.7 0.4 0.097 12.7 0.0 2.4 1 1 1 2 2 2 2 Dynamin family MeaB PF03308.16 CCF73320.1 - 0.003 16.6 0.2 0.0064 15.5 0.1 1.6 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AIG1 PF04548.16 CCF73320.1 - 0.014 14.7 0.0 0.021 14.1 0.0 1.2 1 0 0 1 1 1 0 AIG1 family Gal_Lectin PF02140.18 CCF73321.1 - 0.0045 17.4 15.6 1.2 9.6 0.0 5.8 4 2 0 4 4 4 2 Galactose binding lectin domain CpxA_peri PF16527.5 CCF73321.1 - 0.14 12.5 0.1 0.33 11.3 0.1 1.6 1 0 0 1 1 1 0 Two-component sensor protein CpxA, periplasmic domain Prefoldin_2 PF01920.20 CCF73322.1 - 2.7e-11 43.3 13.2 3.3e-11 43.1 13.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit MutS_III PF05192.18 CCF73322.1 - 0.12 12.5 2.2 0.14 12.4 2.2 1.0 1 0 0 1 1 1 0 MutS domain III Dus PF01207.17 CCF73324.1 - 2.2e-63 214.2 0.0 2.8e-63 213.9 0.0 1.2 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) DHO_dh PF01180.21 CCF73324.1 - 3.3e-06 26.5 0.0 6e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase His_biosynth PF00977.21 CCF73324.1 - 1.7e-05 24.4 0.0 2.7e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Histidine biosynthesis protein ThiG PF05690.14 CCF73324.1 - 0.002 17.5 0.3 0.0052 16.1 0.2 1.7 1 1 1 2 2 2 1 Thiazole biosynthesis protein ThiG NMO PF03060.15 CCF73324.1 - 0.017 14.6 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Nitronate monooxygenase FMN_dh PF01070.18 CCF73324.1 - 0.039 13.0 0.0 0.056 12.5 0.0 1.2 1 0 0 1 1 1 0 FMN-dependent dehydrogenase TMP-TENI PF02581.17 CCF73324.1 - 0.045 13.1 0.1 0.074 12.4 0.1 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase Erf4 PF10256.9 CCF73325.1 - 0.0066 16.5 0.0 0.0083 16.2 0.0 1.2 1 0 0 1 1 1 1 Golgin subfamily A member 7/ERF4 family SpoIIM PF01944.17 CCF73326.1 - 0.019 15.0 0.6 0.035 14.1 0.6 1.4 1 0 0 1 1 1 0 Stage II sporulation protein M ABC-3 PF00950.17 CCF73326.1 - 0.031 13.8 0.5 0.064 12.7 0.5 1.4 1 0 0 1 1 1 0 ABC 3 transport family FAST_1 PF06743.15 CCF73326.1 - 0.13 12.2 2.4 0.85 9.6 0.0 3.4 3 1 1 4 4 4 0 FAST kinase-like protein, subdomain 1 Avl9 PF09794.9 CCF73327.1 - 4.7e-25 88.1 5.4 1.7e-19 69.8 0.7 2.7 2 1 1 3 3 3 2 Transport protein Avl9 MORN PF02493.20 CCF73327.1 - 1.8e-18 65.2 51.5 0.00016 21.3 0.2 10.5 11 0 0 11 11 11 7 MORN repeat DENN PF02141.21 CCF73327.1 - 0.016 15.2 4.3 1.8 8.5 2.2 2.8 2 1 0 2 2 2 0 DENN (AEX-3) domain SPA PF08616.10 CCF73327.1 - 0.022 14.7 0.1 0.099 12.6 0.1 2.1 1 1 0 1 1 1 0 Stabilization of polarity axis DUF3048_C PF17479.2 CCF73327.1 - 0.084 13.3 3.9 1.1 9.7 0.5 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3048) C-terminal domain TCTP PF00838.17 CCF73328.1 - 1.8e-51 174.7 1.4 2.1e-51 174.6 1.4 1.0 1 0 0 1 1 1 1 Translationally controlled tumour protein DUF3600 PF12207.8 CCF73328.1 - 0.023 14.6 1.2 0.037 14.0 1.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF3600) TINF2_N PF14973.6 CCF73328.1 - 0.12 12.7 0.1 0.16 12.3 0.1 1.3 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus FGE-sulfatase PF03781.16 CCF73328.1 - 0.12 11.9 0.1 0.15 11.6 0.1 1.1 1 0 0 1 1 1 0 Sulfatase-modifying factor enzyme 1 zf-MYND PF01753.18 CCF73329.1 - 4.9e-11 42.5 11.5 1.1e-10 41.5 11.5 1.6 1 0 0 1 1 1 1 MYND finger zf-DBF PF07535.12 CCF73329.1 - 0.015 15.4 1.9 0.048 13.8 1.9 1.9 1 0 0 1 1 1 0 DBF zinc finger DUF3846 PF12957.7 CCF73329.1 - 0.041 14.2 0.0 0.077 13.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3846) HypA PF01155.19 CCF73329.1 - 0.089 12.8 1.8 0.17 11.9 1.8 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA WD40_3 PF15911.5 CCF73329.1 - 0.093 12.7 0.1 0.28 11.2 0.1 1.9 1 1 0 1 1 1 0 WD domain, G-beta repeat DUF2373 PF10180.9 CCF73329.1 - 0.27 11.1 1.3 0.49 10.3 0.0 2.0 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2373) Keratin_matx PF04579.12 CCF73329.1 - 0.69 10.3 4.0 0.33 11.3 0.3 2.2 1 1 1 2 2 2 0 Keratin, high-sulphur matrix protein GTP_EFTU PF00009.27 CCF73330.1 - 1.4e-62 210.7 0.0 2.2e-62 210.1 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 CCF73330.1 - 2.9e-38 130.4 0.0 5.1e-38 129.6 0.0 1.4 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 CCF73330.1 - 1.6e-26 92.2 0.8 6.8e-26 90.2 0.0 2.2 2 0 0 2 2 2 1 Elongation Factor G, domain II EFG_C PF00679.24 CCF73330.1 - 2.9e-24 84.9 0.0 6.2e-24 83.9 0.0 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 CCF73330.1 - 1.1e-13 51.4 0.9 2.2e-13 50.4 0.9 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF73330.1 - 0.0067 16.5 0.0 0.015 15.4 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 CCF73330.1 - 0.052 13.4 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain RRM_1 PF00076.22 CCF73331.1 - 1.8e-19 69.3 0.1 3.2e-08 33.3 0.0 3.0 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7TM_GPCR_Srd PF10317.9 CCF73331.1 - 0.043 13.0 0.1 0.058 12.6 0.1 1.4 1 1 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srd Vps26 PF03643.15 CCF73331.1 - 0.088 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 26 SMC_N PF02463.19 CCF73332.1 - 2.5e-37 128.5 0.0 5.2e-37 127.4 0.0 1.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 CCF73332.1 - 1.4e-16 60.9 0.0 3.8e-16 59.5 0.0 1.7 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 CCF73332.1 - 1e-11 45.2 3.7 1.1e-06 28.7 0.0 3.9 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF4407 PF14362.6 CCF73332.1 - 0.00059 19.3 29.9 0.073 12.4 0.0 5.3 3 1 1 4 4 4 2 Domain of unknown function (DUF4407) AAA_29 PF13555.6 CCF73332.1 - 0.0051 16.5 0.0 0.02 14.6 0.0 2.0 1 1 0 1 1 1 1 P-loop containing region of AAA domain Cauli_DNA-bind PF03310.13 CCF73332.1 - 0.011 15.8 3.3 0.069 13.2 3.3 2.5 1 0 0 1 1 1 0 Caulimovirus DNA-binding protein Baculo_PEP_C PF04513.12 CCF73332.1 - 0.11 12.5 34.7 0.18 11.8 0.0 6.7 3 2 3 6 6 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2443 PF10398.9 CCF73332.1 - 0.43 10.6 11.3 0.37 10.8 0.2 5.1 5 0 0 5 5 5 0 Protein of unknown function (DUF2443) LPP PF04728.13 CCF73332.1 - 1.3 9.4 21.3 0.74 10.3 0.3 7.5 8 0 0 8 8 8 0 Lipoprotein leucine-zipper Endotoxin_C2 PF18449.1 CCF73332.1 - 1.6 9.1 5.7 1 9.8 1.6 2.7 2 0 0 2 2 2 0 Delta endotoxin Ufm1 PF03671.14 CCF73333.1 - 1.1e-38 131.2 0.2 1.2e-38 131.0 0.2 1.0 1 0 0 1 1 1 1 Ubiquitin fold modifier 1 protein Upf2 PF04050.14 CCF73333.1 - 0.19 12.5 0.2 0.22 12.2 0.2 1.1 1 0 0 1 1 1 0 Up-frameshift suppressor 2 DUF3510 PF12022.8 CCF73334.1 - 2.5e-13 50.5 9.2 2.5e-12 47.3 0.1 4.4 4 0 0 4 4 4 1 Domain of unknown function (DUF3510) COG2 PF06148.11 CCF73334.1 - 0.0044 17.1 1.1 0.0044 17.1 1.1 2.9 3 0 0 3 3 3 1 COG (conserved oligomeric Golgi) complex component, COG2 DUF5082 PF16888.5 CCF73334.1 - 0.03 14.6 2.7 0.037 14.3 0.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5082) Spc29 PF17082.5 CCF73334.1 - 0.066 13.0 2.3 0.15 11.9 1.8 1.8 1 1 0 1 1 1 0 Spindle Pole Component 29 Ovate PF04844.13 CCF73334.1 - 0.12 12.4 0.1 0.33 11.0 0.1 1.8 1 0 0 1 1 1 0 Transcriptional repressor, ovate Med28 PF11594.8 CCF73334.1 - 0.15 12.1 3.7 0.12 12.4 0.4 2.6 3 0 0 3 3 2 0 Mediator complex subunit 28 FlaC_arch PF05377.11 CCF73334.1 - 0.34 11.3 6.6 0.18 12.2 0.2 3.6 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DUF948 PF06103.11 CCF73334.1 - 2.3 8.5 5.4 1.1 9.6 0.3 3.1 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Laminin_I PF06008.14 CCF73334.1 - 2.7 7.6 9.2 0.13 12.0 1.6 2.7 4 0 0 4 4 4 0 Laminin Domain I MCPsignal PF00015.21 CCF73334.1 - 3.3 7.5 7.9 2 8.2 0.7 3.3 3 0 0 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain BLOC1_2 PF10046.9 CCF73334.1 - 6 7.2 13.8 2.4 8.5 0.3 3.9 4 0 0 4 4 4 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Sec34 PF04136.15 CCF73334.1 - 8.2 6.3 14.1 0.22 11.4 2.5 4.0 5 0 0 5 5 5 0 Sec34-like family AAA PF00004.29 CCF73335.1 - 4.4e-42 143.6 0.4 1.3e-41 142.1 0.0 2.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 CCF73335.1 - 2.2e-18 65.9 0.1 4.6e-18 64.9 0.1 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 CCF73335.1 - 8.8e-10 38.2 0.1 1.9e-09 37.2 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 CCF73335.1 - 7.5e-07 29.2 0.1 4.4e-06 26.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF73335.1 - 7e-06 26.5 0.2 0.0032 17.9 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 CCF73335.1 - 5.9e-05 23.3 0.0 0.00013 22.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 CCF73335.1 - 0.00011 22.0 0.0 0.00032 20.5 0.0 1.8 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 CCF73335.1 - 0.00081 19.7 0.6 0.072 13.4 0.0 2.4 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 CCF73335.1 - 0.0015 17.9 0.1 0.014 14.8 0.0 2.3 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 CCF73335.1 - 0.0026 17.9 0.0 0.0054 16.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain DUF815 PF05673.13 CCF73335.1 - 0.0091 15.2 0.0 0.016 14.4 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) PhoH PF02562.16 CCF73335.1 - 0.014 14.8 0.0 0.027 13.9 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein IstB_IS21 PF01695.17 CCF73335.1 - 0.02 14.6 0.0 0.04 13.6 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein BicD PF09730.9 CCF73335.1 - 0.023 13.1 2.5 0.034 12.6 2.5 1.1 1 0 0 1 1 1 0 Microtubule-associated protein Bicaudal-D AAA_19 PF13245.6 CCF73335.1 - 0.035 14.4 0.0 0.068 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CCF73335.1 - 0.04 13.6 0.1 0.091 12.5 0.1 1.7 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 CCF73335.1 - 0.054 13.2 0.0 0.22 11.2 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain ATPase PF06745.13 CCF73335.1 - 0.056 12.8 1.3 0.086 12.2 0.0 2.0 3 0 0 3 3 3 0 KaiC AAA_7 PF12775.7 CCF73335.1 - 0.07 12.6 0.0 0.16 11.5 0.0 1.5 1 1 0 1 1 1 0 P-loop containing dynein motor region RNA_helicase PF00910.22 CCF73335.1 - 0.15 12.5 0.0 0.38 11.2 0.0 1.8 1 0 0 1 1 1 0 RNA helicase JIP_LZII PF16471.5 CCF73335.1 - 0.43 10.8 4.0 0.25 11.5 1.2 2.1 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II DUF2981 PF11200.8 CCF73336.1 - 2e-67 228.3 10.6 4.3e-46 158.2 0.1 2.0 1 1 1 2 2 2 2 Protein of unknown function (DUF2981) HAGH_C PF16123.5 CCF73337.1 - 6.4e-18 65.0 0.0 1e-17 64.4 0.0 1.3 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 CCF73337.1 - 1e-07 32.2 0.0 1.8e-07 31.4 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CCF73337.1 - 0.018 14.6 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Ribosomal_L38e PF01781.18 CCF73338.1 - 7.4e-24 83.6 1.5 8.5e-24 83.4 1.5 1.1 1 0 0 1 1 1 1 Ribosomal L38e protein family RL10P_insert PF17777.1 CCF73339.1 - 3.9e-22 78.0 0.0 7.7e-22 77.1 0.0 1.5 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 CCF73339.1 - 1.2e-16 60.7 0.0 2.3e-16 59.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.19 CCF73339.1 - 9.1e-16 58.2 1.9 9.1e-16 58.2 1.9 1.7 2 0 0 2 2 2 1 60s Acidic ribosomal protein USP19_linker PF16602.5 CCF73339.1 - 0.1 13.2 1.1 2 9.0 0.1 2.5 2 0 0 2 2 2 0 Linker region of USP19 deubiquitinase DUF5327 PF17261.2 CCF73339.1 - 0.79 10.5 3.7 17 6.2 2.4 2.9 2 1 0 2 2 2 0 Family of unknown function (DUF5327) ATG16 PF08614.11 CCF73340.1 - 0.00044 20.5 11.6 0.2 11.8 8.0 2.5 2 0 0 2 2 2 2 Autophagy protein 16 (ATG16) Spc7 PF08317.11 CCF73340.1 - 0.018 13.9 19.2 0.16 10.9 7.2 2.7 3 0 0 3 3 3 0 Spc7 kinetochore protein JAKMIP_CC3 PF16034.5 CCF73340.1 - 0.026 14.5 12.4 0.27 11.1 8.6 2.6 2 0 0 2 2 2 0 JAKMIP CC3 domain APG6_N PF17675.1 CCF73340.1 - 0.031 14.8 20.0 0.18 12.3 9.9 3.0 2 1 0 2 2 2 0 Apg6 coiled-coil region DUF4407 PF14362.6 CCF73340.1 - 0.097 12.0 7.5 0.92 8.8 3.3 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) Filament PF00038.21 CCF73340.1 - 0.13 11.8 19.7 0.24 10.9 1.6 2.8 3 0 0 3 3 3 0 Intermediate filament protein Fez1 PF06818.15 CCF73340.1 - 0.16 12.4 13.4 0.32 11.4 5.5 2.8 2 1 0 2 2 2 0 Fez1 TMF_TATA_bd PF12325.8 CCF73340.1 - 0.18 12.0 13.1 0.048 13.9 2.9 3.3 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding ZapB PF06005.12 CCF73340.1 - 0.29 11.6 19.7 5.1 7.6 0.3 3.9 2 1 1 3 3 3 0 Cell division protein ZapB HR1 PF02185.16 CCF73340.1 - 0.32 11.1 14.2 0.14 12.3 2.1 3.6 2 1 0 2 2 2 0 Hr1 repeat DUF4140 PF13600.6 CCF73340.1 - 1.1 9.7 8.6 6.6 7.2 1.3 3.5 4 0 0 4 4 3 0 N-terminal domain of unknown function (DUF4140) DUF4200 PF13863.6 CCF73340.1 - 1.2 9.5 23.6 0.51 10.8 11.0 3.0 3 0 0 3 3 2 0 Domain of unknown function (DUF4200) DUF2203 PF09969.9 CCF73340.1 - 2.3 8.9 8.7 11 6.8 0.5 3.9 4 0 0 4 4 4 0 Uncharacterized conserved protein (DUF2203) Phage_Mu_Gam PF07352.12 CCF73340.1 - 2.3 8.1 9.0 0.2 11.5 2.3 2.7 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein DUF641 PF04859.12 CCF73340.1 - 2.3 8.5 15.1 0.5 10.7 5.8 2.9 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) DUF948 PF06103.11 CCF73340.1 - 2.5 8.4 9.1 9.7 6.5 0.2 3.6 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF948) Csm1_N PF18504.1 CCF73340.1 - 3.2 8.1 18.8 0.36 11.2 4.4 3.7 4 0 0 4 4 4 0 Csm1 N-terminal domain Tropomyosin_1 PF12718.7 CCF73340.1 - 4.9 7.3 17.7 1.6 8.9 9.3 2.9 2 1 0 2 2 2 0 Tropomyosin like PKcGMP_CC PF16808.5 CCF73340.1 - 5.1 7.0 8.8 2.9 7.8 0.3 3.5 4 0 0 4 4 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase DUF724 PF05266.14 CCF73340.1 - 6.7 6.5 16.6 5.9 6.7 5.1 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF724) Lebercilin PF15619.6 CCF73340.1 - 7.4 6.2 22.8 5 6.7 12.1 3.1 3 0 0 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease DUF4598 PF15370.6 CCF73341.1 - 0.0014 19.1 0.1 0.0021 18.5 0.1 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4598) EF-hand_6 PF13405.6 CCF73342.1 - 0.00031 20.4 0.1 0.0059 16.4 0.0 2.8 2 1 1 3 3 3 1 EF-hand domain EF-hand_7 PF13499.6 CCF73342.1 - 0.0022 18.4 0.1 0.0048 17.3 0.1 1.7 1 1 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 CCF73342.1 - 0.032 13.8 0.1 0.41 10.3 0.0 2.7 4 0 0 4 4 4 0 EF hand TRAPP PF04051.16 CCF73343.1 - 8.6e-24 83.9 0.1 1e-23 83.7 0.1 1.1 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component NOB1_Zn_bind PF08772.11 CCF73344.1 - 3.5e-21 75.1 0.5 7.1e-21 74.1 0.5 1.6 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like PIN_6 PF17146.4 CCF73344.1 - 5.8e-19 68.4 0.0 1.1e-18 67.5 0.0 1.5 1 0 0 1 1 1 1 PIN domain of ribonuclease Ribosomal_L40e PF01020.17 CCF73344.1 - 0.039 13.9 0.5 0.11 12.4 0.5 1.8 1 0 0 1 1 1 0 Ribosomal L40e family UPF0054 PF02130.17 CCF73345.1 - 1.6e-19 70.0 0.2 5.6e-19 68.2 0.2 1.9 1 1 0 1 1 1 1 Uncharacterized protein family UPF0054 MOLO1 PF17175.4 CCF73345.1 - 4.3e-14 52.7 0.2 1.3e-05 25.3 0.0 2.5 2 0 0 2 2 2 2 Modulator of levamisole receptor-1 TPM_phosphatase PF04536.14 CCF73345.1 - 0.0015 18.7 0.0 0.0038 17.4 0.0 1.6 2 0 0 2 2 2 1 TPM domain SUN PF03856.13 CCF73345.1 - 0.014 14.9 0.2 0.023 14.1 0.2 1.3 1 0 0 1 1 1 0 Beta-glucosidase (SUN family) DUF3591 PF12157.8 CCF73346.1 - 5.9e-35 120.8 0.0 1.4e-32 112.9 0.0 2.9 1 1 0 1 1 1 1 Protein of unknown function (DUF3591) zf-CCHC PF00098.23 CCF73346.1 - 0.0042 17.1 0.1 0.015 15.4 0.1 2.0 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_6 PF15288.6 CCF73346.1 - 0.0054 16.5 0.4 0.014 15.3 0.4 1.7 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC_2 PF13696.6 CCF73346.1 - 0.23 11.3 1.3 0.61 10.0 1.3 1.7 1 0 0 1 1 1 0 Zinc knuckle EMP24_GP25L PF01105.24 CCF73347.1 - 7e-16 58.7 0.0 9.1e-16 58.3 0.0 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD 4HB_MCP_1 PF12729.7 CCF73347.1 - 0.3 10.6 2.8 0.16 11.5 0.8 1.6 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction Tubulin PF00091.25 CCF73348.1 - 3.9e-65 219.8 0.0 6.5e-65 219.0 0.0 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 CCF73348.1 - 5.4e-45 152.6 0.3 9.2e-45 151.9 0.3 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 CCF73348.1 - 0.083 12.6 0.0 0.37 10.4 0.0 2.1 2 0 0 2 2 2 0 Tubulin domain GLTSCR1 PF15249.6 CCF73350.1 - 0.0016 18.9 0.2 0.0016 18.9 0.2 2.4 2 2 0 2 2 2 1 Conserved region of unknown function on GLTSCR protein Glutaredoxin PF00462.24 CCF73351.1 - 1.1e-15 57.6 0.0 1.7e-15 56.9 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin DUF836 PF05768.14 CCF73351.1 - 0.001 19.4 0.0 0.0012 19.2 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) Thioredoxin_2 PF13098.6 CCF73351.1 - 0.0024 18.3 0.1 0.0033 17.9 0.1 1.3 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_3 PF13192.6 CCF73351.1 - 0.013 15.5 0.0 0.025 14.6 0.0 1.5 1 1 0 1 1 1 0 Thioredoxin domain TraF PF13728.6 CCF73351.1 - 0.058 13.2 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein OTT_1508_deam PF14441.6 CCF73351.1 - 0.11 12.5 0.1 0.18 11.9 0.1 1.4 1 0 0 1 1 1 0 OTT_1508-like deaminase DSBA PF01323.20 CCF73351.1 - 0.12 12.2 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 DSBA-like thioredoxin domain Aha1_N PF09229.11 CCF73352.1 - 2.1e-32 112.2 10.8 8.3e-19 68.2 1.6 2.1 2 0 0 2 2 2 2 Activator of Hsp90 ATPase, N-terminal DUF1064 PF06356.11 CCF73352.1 - 0.022 15.1 0.2 0.53 10.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1064) PDZ_3 PF17815.1 CCF73353.1 - 1.4e-45 154.7 0.0 2.8e-45 153.7 0.0 1.5 1 0 0 1 1 1 1 PDZ domain Trypsin_2 PF13365.6 CCF73353.1 - 5.6e-18 66.3 0.2 1e-17 65.4 0.2 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 CCF73353.1 - 3.8e-16 59.6 0.5 8.3e-16 58.5 0.1 1.8 2 0 0 2 2 2 1 Trypsin PDZ_2 PF13180.6 CCF73353.1 - 0.0015 18.8 0.1 0.02 15.2 0.0 2.8 3 0 0 3 3 3 1 PDZ domain PDZ_6 PF17820.1 CCF73353.1 - 0.033 14.0 1.2 4.2 7.3 0.1 2.9 3 0 0 3 3 3 0 PDZ domain FDF PF09532.10 CCF73353.1 - 0.095 13.6 0.1 0.2 12.5 0.1 1.5 1 0 0 1 1 1 0 FDF domain Ribosomal_L10 PF00466.20 CCF73354.1 - 4.9e-07 29.8 1.3 0.026 14.6 0.1 2.5 2 0 0 2 2 2 2 Ribosomal protein L10 Zeta_toxin PF06414.12 CCF73354.1 - 0.14 11.4 0.0 0.39 10.0 0.0 1.7 1 1 0 1 1 1 0 Zeta toxin UCH PF00443.29 CCF73355.1 - 2e-41 142.2 1.6 3e-41 141.6 1.6 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 CCF73355.1 - 5.2e-13 49.1 0.0 1.8e-12 47.4 0.0 2.0 1 0 0 1 1 1 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 CCF73355.1 - 5.2e-06 26.3 7.8 5.4e-05 22.9 7.8 2.4 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase ubiquitin PF00240.23 CCF73356.1 - 0.0059 16.3 0.0 0.019 14.7 0.0 1.8 2 0 0 2 2 2 1 Ubiquitin family Ubiquitin_2 PF14560.6 CCF73356.1 - 0.038 14.4 0.0 0.21 12.1 0.0 2.0 1 1 0 1 1 1 0 Ubiquitin-like domain Laminin_N PF00055.17 CCF73356.1 - 0.041 13.5 0.0 0.071 12.7 0.0 1.3 1 0 0 1 1 1 0 Laminin N-terminal (Domain VI) RRM_1 PF00076.22 CCF73357.1 - 1e-16 60.5 0.6 3e-16 59.0 0.1 2.0 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) eIF3g PF12353.8 CCF73357.1 - 7.9e-09 36.0 1.0 1.4e-08 35.2 0.2 1.8 2 0 0 2 2 2 1 Eukaryotic translation initiation factor 3 subunit G WD40_alt PF14077.6 CCF73357.1 - 0.17 11.7 0.9 9.3 6.2 0.1 2.5 2 0 0 2 2 2 0 Alternative WD40 repeat motif ComGF PF15980.5 CCF73357.1 - 0.46 10.9 4.4 0.15 12.5 0.6 2.1 2 0 0 2 2 2 0 Putative Competence protein ComGF DnaJ PF00226.31 CCF73359.1 - 5.4e-13 48.9 2.5 4e-12 46.1 2.5 2.5 2 1 0 2 2 2 1 DnaJ domain RRM_1 PF00076.22 CCF73360.1 - 1.1e-08 34.7 0.0 0.00047 19.9 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF73360.1 - 0.014 15.2 0.1 0.1 12.4 0.0 2.3 3 0 0 3 3 3 0 Occluded RNA-recognition motif RRM_5 PF13893.6 CCF73360.1 - 0.073 12.7 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) EXOSC1 PF10447.9 CCF73361.1 - 2.8e-08 34.4 0.1 0.0018 18.9 0.0 2.6 2 1 1 3 3 3 2 Exosome component EXOSC1/CSL4 zf-PARP PF00645.18 CCF73361.1 - 0.029 15.2 0.2 0.05 14.5 0.2 1.6 1 1 0 1 1 1 0 Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region TRAPPC9-Trs120 PF08626.11 CCF73362.1 - 0.0011 16.5 0.6 0.51 7.6 0.1 2.5 2 1 1 3 3 3 2 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit DUF4827 PF16109.5 CCF73363.1 - 0.053 13.5 0.1 0.061 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4827) Med10 PF09748.9 CCF73363.1 - 0.072 13.1 0.0 0.12 12.4 0.0 1.4 1 1 0 1 1 1 0 Transcription factor subunit Med10 of Mediator complex Pkinase PF00069.25 CCF73365.1 - 5e-51 173.6 0.1 1.6e-50 172.0 0.1 1.7 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73365.1 - 3.3e-24 85.6 0.1 9.2e-24 84.1 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF73365.1 - 0.0074 15.6 0.0 0.63 9.3 0.0 2.3 2 0 0 2 2 2 2 Kinase-like RIO1 PF01163.22 CCF73365.1 - 0.022 14.4 0.1 0.098 12.3 0.1 2.0 1 1 0 1 1 1 0 RIO1 family Ssu72 PF04722.13 CCF73365.1 - 0.13 11.8 3.6 0.53 9.8 3.6 1.9 1 1 0 1 1 1 0 Ssu72-like protein NAD_Gly3P_dh_C PF07479.14 CCF73366.1 - 2e-45 154.6 0.1 5.9e-45 153.0 0.0 1.8 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NAD_Gly3P_dh_N PF01210.23 CCF73366.1 - 2.1e-44 151.3 2.7 3.1e-44 150.7 2.7 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Rossmann-like PF10727.9 CCF73366.1 - 0.0043 16.9 0.4 0.054 13.3 0.1 2.2 2 0 0 2 2 2 1 Rossmann-like domain ELFV_dehydrog PF00208.21 CCF73366.1 - 0.019 14.7 0.1 0.028 14.1 0.1 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GTP1_OBG PF01018.22 CCF73367.1 - 3.3e-49 166.4 6.8 4.7e-49 166.0 6.8 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 CCF73367.1 - 1.5e-21 76.6 0.0 2.4e-21 75.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF1967 PF09269.11 CCF73367.1 - 2e-13 50.1 0.0 3.8e-13 49.2 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1967) FeoB_N PF02421.18 CCF73367.1 - 5.5e-10 39.0 0.0 9.4e-10 38.2 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 CCF73367.1 - 0.0019 17.6 0.0 0.0031 16.9 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region fn3_3 PF14686.6 CCF73367.1 - 0.0036 17.0 0.2 1.8 8.4 0.0 2.5 2 0 0 2 2 2 2 Polysaccharide lyase family 4, domain II Arf PF00025.21 CCF73367.1 - 0.0082 15.6 0.3 0.032 13.7 0.3 1.8 1 1 0 1 1 1 1 ADP-ribosylation factor family Lactamase_B_6 PF16661.5 CCF73367.1 - 0.088 12.2 0.0 0.14 11.6 0.0 1.3 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Ribosomal_L5_C PF00673.21 CCF73368.1 - 3.1e-22 78.6 0.0 4.6e-22 78.0 0.0 1.3 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 CCF73368.1 - 8.1e-19 67.7 0.0 1.4e-18 66.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L5 Ribosomal_S13 PF00416.22 CCF73369.1 - 1.2e-51 174.5 1.2 3.5e-51 172.9 1.2 1.9 1 0 0 1 1 1 1 Ribosomal protein S13/S18 MFS_1 PF07690.16 CCF73370.1 - 2e-06 27.0 37.9 4.1e-05 22.7 28.5 3.6 2 1 1 3 3 3 2 Major Facilitator Superfamily TSP_NTD PF17804.1 CCF73371.1 - 0.0045 17.3 0.0 0.0045 17.3 0.0 2.5 3 0 0 3 3 3 1 Tail specific protease N-terminal domain Prion PF00377.18 CCF73371.1 - 1.9 8.4 6.9 7.4 6.5 1.0 2.5 2 0 0 2 2 2 0 Prion/Doppel alpha-helical domain RAP PF08373.10 CCF73372.1 - 6.1e-07 29.4 0.1 3.6e-06 27.0 0.1 2.4 1 0 0 1 1 1 1 RAP domain PHD PF00628.29 CCF73373.1 - 1.1e-09 38.0 11.8 2.3e-09 37.0 11.8 1.6 1 0 0 1 1 1 1 PHD-finger ING PF12998.7 CCF73373.1 - 1.2e-06 29.0 6.2 0.00051 20.6 0.0 2.6 2 1 0 3 3 3 2 Inhibitor of growth proteins N-terminal histone-binding zf-RING_2 PF13639.6 CCF73373.1 - 0.016 15.5 10.1 0.031 14.6 10.1 1.5 1 0 0 1 1 1 0 Ring finger domain DUF4116 PF13475.6 CCF73373.1 - 0.066 12.9 0.1 0.17 11.7 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) Ribosomal_S25 PF03297.15 CCF73373.1 - 0.069 13.4 0.4 0.13 12.5 0.4 1.4 1 0 0 1 1 1 0 S25 ribosomal protein zf-ANAPC11 PF12861.7 CCF73373.1 - 0.092 12.8 4.2 0.19 11.8 4.2 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger PHD_2 PF13831.6 CCF73373.1 - 0.16 11.6 6.7 0.37 10.4 6.7 1.7 1 0 0 1 1 1 0 PHD-finger zf-HC5HC2H PF13771.6 CCF73373.1 - 0.5 10.6 6.8 0.12 12.7 3.0 1.9 2 0 0 2 2 2 0 PHD-like zinc-binding domain Prok-RING_1 PF14446.6 CCF73373.1 - 3.3 7.7 11.6 11 6.1 11.8 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 zf-RING_9 PF13901.6 CCF73373.1 - 3.6 7.5 10.4 0.52 10.2 6.4 1.6 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon SBDS_C PF09377.10 CCF73374.1 - 2.8e-32 111.2 0.3 1.1e-30 106.1 0.0 2.4 2 0 0 2 2 2 1 SBDS protein C-terminal domain SBDS PF01172.18 CCF73374.1 - 3.2e-29 100.8 0.5 5.8e-29 100.0 0.5 1.4 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein zf-C2H2_jaz PF12171.8 CCF73374.1 - 0.00094 19.4 4.3 0.0028 17.9 4.3 1.8 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2_4 PF13894.6 CCF73374.1 - 0.09 13.7 3.5 0.7 10.9 3.5 2.7 1 0 0 1 1 1 0 C2H2-type zinc finger Myb_DNA-bind_3 PF12776.7 CCF73374.1 - 0.11 13.5 1.6 1.1 10.3 0.1 2.7 3 0 0 3 3 3 0 Myb/SANT-like DNA-binding domain zf-met PF12874.7 CCF73374.1 - 0.65 10.5 8.8 0.15 12.5 4.7 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type tRNA-synt_1c PF00749.21 CCF73375.1 - 0.042 12.7 0.2 0.045 12.6 0.2 1.0 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain GTP_EFTU PF00009.27 CCF73377.1 - 1e-48 165.5 0.0 2e-48 164.5 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_II PF14492.6 CCF73377.1 - 2.3e-10 40.4 0.0 6.7e-10 38.9 0.0 1.8 1 0 0 1 1 1 1 Elongation Factor G, domain II RF3_C PF16658.5 CCF73377.1 - 3.3e-06 26.9 0.0 7.4e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain MMR_HSR1 PF01926.23 CCF73377.1 - 5.9e-05 23.1 0.0 0.00014 21.9 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_C PF00679.24 CCF73377.1 - 0.002 18.1 0.0 0.0038 17.2 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus zf-RING_4 PF14570.6 CCF73378.1 - 2.9e-19 68.6 10.1 6.4e-19 67.5 10.1 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_3 PF13920.6 CCF73378.1 - 2.9e-09 36.6 5.3 6.4e-09 35.5 5.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RRM_1 PF00076.22 CCF73378.1 - 0.00087 19.1 0.1 0.004 17.0 0.0 2.2 2 1 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-RING_2 PF13639.6 CCF73378.1 - 0.001 19.4 8.7 0.0024 18.1 8.7 1.7 1 0 0 1 1 1 1 Ring finger domain zf-UDP PF14569.6 CCF73378.1 - 0.0022 18.1 2.8 0.0058 16.7 2.8 1.7 1 0 0 1 1 1 1 Zinc-binding RING-finger Prok-RING_4 PF14447.6 CCF73378.1 - 0.0088 15.9 6.2 0.32 10.9 6.7 2.4 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 Torus PF16131.5 CCF73378.1 - 0.013 16.1 0.2 0.053 14.2 0.0 2.2 2 0 0 2 2 1 0 Torus domain zf-C3HC4 PF00097.25 CCF73378.1 - 0.13 12.2 6.9 0.35 10.8 6.9 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF73378.1 - 0.36 10.8 6.5 0.91 9.5 6.5 1.8 1 0 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_2 PF13923.6 CCF73378.1 - 0.45 10.4 9.2 1.1 9.1 9.2 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Baculo_IE-1 PF05290.11 CCF73378.1 - 0.68 9.9 6.6 0.51 10.3 3.0 2.4 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) Rad50_zn_hook PF04423.14 CCF73378.1 - 2.2 8.2 6.3 10 6.1 0.4 2.9 3 0 0 3 3 3 0 Rad50 zinc hook motif zf-C3HC4_4 PF15227.6 CCF73378.1 - 8.4 6.6 9.5 57 4.0 9.5 2.4 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-ZPR1 PF03367.13 CCF73379.1 - 1e-81 272.5 0.1 5.8e-40 136.8 0.0 2.1 2 0 0 2 2 2 2 ZPR1 zinc-finger domain Zn-ribbon_8 PF09723.10 CCF73379.1 - 0.00018 21.6 4.9 2.3 8.4 0.1 4.3 4 0 0 4 4 4 2 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 CCF73379.1 - 0.049 13.6 8.3 0.83 9.7 0.2 2.8 2 1 0 2 2 2 0 Transposase zinc-ribbon domain DUF4912 PF16258.5 CCF73379.1 - 0.089 13.0 0.2 0.16 12.2 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4912) HypA PF01155.19 CCF73379.1 - 0.1 12.6 5.9 1.2 9.1 1.0 2.7 3 0 0 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Lar_restr_allev PF14354.6 CCF73379.1 - 1.4 9.4 11.2 2.3 8.6 0.4 2.6 2 1 0 2 2 2 0 Restriction alleviation protein Lar zf-ribbon_3 PF13248.6 CCF73379.1 - 3.6 7.1 18.6 4.7 6.8 0.2 4.4 4 0 0 4 4 4 0 zinc-ribbon domain zf-Mss51 PF13824.6 CCF73379.1 - 7.9 6.7 13.1 2.1 8.5 0.2 4.1 3 1 0 3 3 3 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF2428 PF10350.9 CCF73380.1 - 5.4e-13 48.8 0.1 1.9e-12 47.0 0.1 2.0 1 0 0 1 1 1 1 Putative death-receptor fusion protein (DUF2428) DHHC PF01529.20 CCF73381.1 - 1.7e-26 92.9 16.8 1.7e-26 92.9 14.0 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase Sigma_reg_N PF13800.6 CCF73381.1 - 10 6.5 8.7 0.87 9.9 0.7 2.5 2 1 0 2 2 2 0 Sigma factor regulator N-terminal RRM_1 PF00076.22 CCF73382.1 - 6.4e-19 67.6 0.1 9.5e-19 67.0 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF73382.1 - 5e-05 22.9 0.0 6.9e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PAW PF04721.17 CCF73382.1 - 0.0059 16.4 0.4 0.0076 16.0 0.4 1.1 1 0 0 1 1 1 1 PNGase C-terminal domain, mannose-binding module PAW RRM_3 PF08777.11 CCF73382.1 - 0.056 13.5 0.2 0.18 11.9 0.2 1.8 1 1 0 1 1 1 0 RNA binding motif RRM_occluded PF16842.5 CCF73382.1 - 0.096 12.6 0.0 0.18 11.7 0.0 1.4 1 1 0 1 1 1 0 Occluded RNA-recognition motif OB_RNB PF08206.11 CCF73382.1 - 0.15 11.8 0.6 0.25 11.0 0.6 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain AMPK1_CBM PF16561.5 CCF73383.1 - 1.7e-15 57.0 0.0 3.1e-15 56.2 0.0 1.4 1 0 0 1 1 1 1 Glycogen recognition site of AMP-activated protein kinase TB2_DP1_HVA22 PF03134.19 CCF73384.1 - 1.8e-12 47.0 9.8 1.8e-12 47.0 9.8 2.0 2 0 0 2 2 2 1 TB2/DP1, HVA22 family Rad21_Rec8 PF04824.16 CCF73385.1 - 0.068 12.5 0.0 0.13 11.6 0.0 1.4 1 0 0 1 1 1 0 Conserved region of Rad21 / Rec8 like protein eIF2_C PF09173.11 CCF73386.1 - 1.3e-35 121.5 0.1 3.9e-35 120.0 0.1 1.9 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 CCF73386.1 - 3.3e-22 79.0 0.1 2.4e-21 76.1 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 CCF73386.1 - 4.4e-12 46.2 2.3 6.7e-12 45.6 0.7 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF73386.1 - 0.0038 17.3 0.0 0.0074 16.4 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CCF73386.1 - 0.018 15.0 0.1 0.16 11.8 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase Dak1_2 PF13684.6 CCF73386.1 - 0.052 12.6 0.1 0.088 11.9 0.1 1.3 1 0 0 1 1 1 0 Dihydroxyacetone kinase family IBR PF01485.21 CCF73386.1 - 1.1 9.6 4.6 2 8.7 0.1 2.5 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain TAtT PF16811.5 CCF73388.1 - 0.06 12.6 0.0 0.06 12.6 0.0 1.2 1 0 0 1 1 1 0 TRAP transporter T-component DUF2076 PF09849.9 CCF73389.1 - 0.0079 16.3 1.1 0.0098 16.0 1.1 1.1 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2076) FAM176 PF14851.6 CCF73389.1 - 0.26 10.9 6.9 0.25 11.0 5.5 1.6 2 0 0 2 2 2 0 FAM176 family WRNPLPNID PF15017.6 CCF73389.1 - 0.36 11.7 7.6 0.57 11.1 7.6 1.3 1 0 0 1 1 1 0 Putative WW-binding domain and destruction box PBP1_TM PF14812.6 CCF73389.1 - 0.48 10.8 10.8 2.4 8.6 10.4 1.9 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal DNA_pol_phi PF04931.13 CCF73389.1 - 0.85 7.6 10.0 0.97 7.5 10.0 1.1 1 0 0 1 1 1 0 DNA polymerase phi RXT2_N PF08595.11 CCF73389.1 - 1.6 8.8 8.4 2.3 8.2 8.4 1.3 1 0 0 1 1 1 0 RXT2-like, N-terminal CDC45 PF02724.14 CCF73389.1 - 6.4 4.9 9.0 7.5 4.7 9.0 1.1 1 0 0 1 1 1 0 CDC45-like protein EzrA PF06160.12 CCF73390.1 - 0.00099 17.4 31.5 0.016 13.4 21.7 2.1 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA Filament PF00038.21 CCF73390.1 - 0.025 14.1 27.7 0.046 13.3 27.7 1.4 1 0 0 1 1 1 0 Intermediate filament protein SlyX PF04102.12 CCF73390.1 - 0.026 15.1 2.8 0.026 15.1 2.8 3.9 1 1 3 4 4 4 0 SlyX NFRKB_winged PF14465.6 CCF73390.1 - 0.05 13.8 2.0 0.51 10.6 0.1 3.0 3 1 0 3 3 3 0 NFRKB Winged Helix-like Myb_DNA-bind_5 PF13873.6 CCF73390.1 - 0.76 9.9 9.3 1.4 9.1 2.3 2.5 2 0 0 2 2 2 0 Myb/SANT-like DNA-binding domain Leu_zip PF15294.6 CCF73390.1 - 2.2 7.7 29.6 0.62 9.5 11.9 2.2 1 1 1 2 2 2 0 Leucine zipper Jnk-SapK_ap_N PF09744.9 CCF73390.1 - 2.6 8.2 32.0 0.64 10.2 16.9 2.4 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 BLOC1_2 PF10046.9 CCF73390.1 - 2.7 8.3 23.0 0.12 12.7 13.2 2.8 1 1 2 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Myb_DNA-bind_3 PF12776.7 CCF73390.1 - 4.4 8.3 9.6 19 6.3 0.6 3.0 1 1 1 2 2 2 0 Myb/SANT-like DNA-binding domain EDR1 PF14381.6 CCF73390.1 - 4.8 6.8 8.5 1.9 8.2 5.4 1.8 2 1 0 2 2 2 0 Ethylene-responsive protein kinase Le-CTR1 Spc7 PF08317.11 CCF73390.1 - 5 5.9 32.5 12 4.6 12.6 2.3 1 1 1 2 2 2 0 Spc7 kinetochore protein SAM_Exu PF18609.1 CCF73390.1 - 5.7 7.1 7.3 0.72 10.0 1.8 2.5 3 0 0 3 3 3 0 Exuperantia SAM-like domain Mod_r PF07200.13 CCF73390.1 - 8.1 6.5 26.8 3.9 7.6 8.2 2.6 2 0 0 2 2 2 0 Modifier of rudimentary (Mod(r)) protein Actin PF00022.19 CCF73391.1 - 2.9e-51 174.4 0.0 9.6e-50 169.4 0.0 2.0 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 CCF73391.1 - 0.034 13.0 0.0 0.06 12.2 0.0 1.3 1 0 0 1 1 1 0 MreB/Mbl protein Med21 PF11221.8 CCF73392.1 - 0.0032 17.7 2.9 0.0092 16.2 2.9 1.6 1 1 0 1 1 1 1 Subunit 21 of Mediator complex MnmE_helical PF12631.7 CCF73392.1 - 0.024 14.8 0.1 0.03 14.5 0.1 1.1 1 0 0 1 1 1 0 MnmE helical domain WD40 PF00400.32 CCF73393.1 - 0.0023 18.7 11.1 0.42 11.6 0.3 5.3 5 0 0 5 5 5 2 WD domain, G-beta repeat HHH_7 PF14635.6 CCF73393.1 - 0.049 14.0 0.0 0.17 12.2 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix motif Pkinase PF00069.25 CCF73394.1 - 3e-64 216.9 0.5 5e-42 144.1 0.1 3.1 3 0 0 3 3 3 3 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73394.1 - 2.4e-32 112.2 0.2 1.1e-25 90.4 0.0 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 CCF73394.1 - 0.0017 17.4 0.1 0.0029 16.6 0.1 1.5 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 CCF73394.1 - 0.034 13.5 0.0 0.16 11.3 0.0 1.9 2 0 0 2 2 2 0 Kinase-like Kdo PF06293.14 CCF73394.1 - 0.23 10.8 0.4 0.43 9.9 0.1 1.7 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family RabGAP-TBC PF00566.18 CCF73395.1 - 1.3e-50 172.0 0.7 2.4e-50 171.2 0.7 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain RAP PF08373.10 CCF73396.1 - 0.00059 19.9 0.1 0.0024 17.9 0.1 2.1 1 0 0 1 1 1 1 RAP domain Peptidase_M24 PF00557.24 CCF73397.1 - 4.7e-17 62.4 0.0 6.1e-17 62.0 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 BHD_3 PF10405.9 CCF73398.1 - 4.6e-10 39.8 0.0 1.2e-09 38.5 0.0 1.6 1 0 0 1 1 1 1 Rad4 beta-hairpin domain 3 BHD_1 PF10403.9 CCF73398.1 - 8.4e-06 25.5 0.0 5.9e-05 22.8 0.0 2.4 1 1 0 1 1 1 1 Rad4 beta-hairpin domain 1 BHD_2 PF10404.9 CCF73398.1 - 0.019 15.9 0.0 0.043 14.8 0.0 1.6 1 0 0 1 1 1 0 Rad4 beta-hairpin domain 2 Methyltrn_RNA_3 PF02598.17 CCF73399.1 - 1.9e-74 250.7 0.0 2.6e-74 250.3 0.0 1.2 1 0 0 1 1 1 1 Putative RNA methyltransferase SpoU_methylase PF00588.19 CCF73399.1 - 0.00062 19.9 0.0 0.029 14.6 0.0 2.3 2 0 0 2 2 2 1 SpoU rRNA Methylase family Ribosomal_L13 PF00572.18 CCF73400.1 - 2.1e-31 108.8 0.1 3.1e-31 108.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L13 Sec23_trunk PF04811.15 CCF73403.1 - 5.5e-15 55.6 0.5 2.5e-14 53.5 0.4 2.1 2 1 0 2 2 2 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 CCF73403.1 - 2.6e-10 40.9 0.0 8.6e-10 39.2 0.0 2.0 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain Sec23_helical PF04815.15 CCF73403.1 - 1.7e-09 37.4 0.2 6.6e-09 35.5 0.1 2.0 2 0 0 2 2 2 1 Sec23/Sec24 helical domain zf-Sec23_Sec24 PF04810.15 CCF73403.1 - 9.3e-06 25.6 1.1 9.3e-06 25.6 1.1 3.2 3 0 0 3 3 3 1 Sec23/Sec24 zinc finger Gelsolin PF00626.22 CCF73403.1 - 0.015 15.2 0.1 0.095 12.6 0.0 2.3 2 0 0 2 2 2 0 Gelsolin repeat Zn-ribbon_8 PF09723.10 CCF73403.1 - 0.14 12.3 0.5 0.55 10.4 0.2 2.2 2 0 0 2 2 2 0 Zinc ribbon domain Helicase_C PF00271.31 CCF73404.1 - 5e-26 91.2 0.6 5e-26 91.2 0.6 2.7 4 0 0 4 4 4 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF73404.1 - 9.7e-24 84.1 0.2 3.9e-23 82.1 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 CCF73404.1 - 7.1e-08 32.6 0.3 3.9e-07 30.2 0.0 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 CCF73404.1 - 0.0001 21.2 2.1 0.0012 17.6 0.0 2.2 2 0 0 2 2 2 1 SNF2 family N-terminal domain SecA_DEAD PF07517.14 CCF73404.1 - 0.018 14.3 0.0 0.048 12.9 0.0 1.7 1 1 0 1 1 1 0 SecA DEAD-like domain AAA_19 PF13245.6 CCF73404.1 - 0.07 13.5 0.0 0.23 11.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 CCF73404.1 - 0.071 13.4 0.6 2.1 8.6 0.6 2.6 1 1 0 1 1 1 0 AAA domain SWI2_SNF2 PF18766.1 CCF73404.1 - 0.1 12.3 0.0 0.19 11.3 0.0 1.5 1 0 0 1 1 1 0 SWI2/SNF2 ATPase DUF4029 PF13221.6 CCF73404.1 - 0.82 10.4 4.1 0.66 10.7 1.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF4029) LSM PF01423.22 CCF73405.1 - 2.4e-23 81.6 0.0 2.9e-23 81.3 0.0 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 CCF73405.1 - 0.00012 22.2 0.0 0.00016 21.8 0.0 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain Hfq PF17209.3 CCF73405.1 - 0.12 12.0 0.0 0.18 11.5 0.0 1.3 1 0 0 1 1 1 0 Hfq protein Methyltransf_4 PF02390.17 CCF73406.1 - 2e-41 141.3 0.0 2.9e-41 140.8 0.0 1.2 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_31 PF13847.6 CCF73406.1 - 0.00012 21.9 0.0 0.00024 21.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF73406.1 - 0.00028 21.5 0.0 0.00064 20.4 0.0 1.7 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF73406.1 - 0.0013 19.4 0.0 0.0029 18.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CCF73406.1 - 0.0046 16.5 0.0 0.0073 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain Ubie_methyltran PF01209.18 CCF73406.1 - 0.0081 15.5 0.0 0.017 14.5 0.0 1.4 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_32 PF13679.6 CCF73406.1 - 0.0088 16.0 0.0 0.014 15.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF73406.1 - 0.0095 15.8 0.0 0.017 15.0 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF73406.1 - 0.017 15.8 0.0 0.038 14.6 0.0 1.6 2 0 0 2 2 1 0 Methyltransferase domain DOT1 PF08123.13 CCF73406.1 - 0.053 13.0 0.0 0.077 12.5 0.0 1.2 1 0 0 1 1 1 0 Histone methylation protein DOT1 CMAS PF02353.20 CCF73406.1 - 0.074 12.3 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase RrnaAD PF00398.20 CCF73406.1 - 0.095 11.7 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase tRNA_lig_kinase PF08303.11 CCF73406.1 - 0.11 12.6 0.0 0.55 10.3 0.0 1.9 2 0 0 2 2 2 0 tRNA ligase kinase domain FmrO PF07091.11 CCF73406.1 - 0.11 12.0 0.0 0.16 11.4 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA methyltransferase (FmrO) dUTPase PF00692.19 CCF73407.1 - 3.7e-15 55.7 0.0 5.2e-15 55.3 0.0 1.2 1 0 0 1 1 1 1 dUTPase Rhomboid PF01694.22 CCF73409.1 - 2.9e-11 43.6 12.5 2.9e-11 43.6 12.5 1.6 2 0 0 2 2 2 1 Rhomboid family DNA_pol_A PF00476.20 CCF73410.1 - 3.9e-79 266.4 0.0 6.3e-79 265.7 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase family A AAA_25 PF13481.6 CCF73410.1 - 2.6e-24 85.9 0.0 4.6e-24 85.1 0.0 1.3 1 0 0 1 1 1 1 AAA domain DNA_pol_A_exo1 PF01612.20 CCF73410.1 - 1.1e-22 80.6 0.0 3.4e-22 79.0 0.0 1.9 1 0 0 1 1 1 1 3'-5' exonuclease AAA_22 PF13401.6 CCF73410.1 - 8e-05 22.9 0.0 0.00029 21.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain Toprim_2 PF13155.6 CCF73410.1 - 0.0005 20.4 0.0 0.0013 19.1 0.0 1.8 1 0 0 1 1 1 1 Toprim-like DnaB_C PF03796.15 CCF73410.1 - 0.0006 19.2 0.0 0.0016 17.9 0.0 1.7 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain ATPase PF06745.13 CCF73410.1 - 0.0032 16.8 0.0 0.013 14.9 0.0 2.0 2 0 0 2 2 2 1 KaiC Toprim_4 PF13662.6 CCF73410.1 - 0.009 16.5 0.0 0.031 14.7 0.0 2.0 1 0 0 1 1 1 1 Toprim domain Toprim_3 PF13362.6 CCF73410.1 - 0.011 16.1 0.0 0.038 14.3 0.0 2.0 2 0 0 2 2 1 0 Toprim domain RNase_H_2 PF13482.6 CCF73410.1 - 0.012 15.6 0.0 0.036 14.1 0.0 1.9 1 0 0 1 1 1 0 RNase_H superfamily AAA_16 PF13191.6 CCF73410.1 - 0.026 14.9 0.0 0.059 13.7 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain RNase_T PF00929.24 CCF73410.1 - 0.062 13.9 0.1 2.1 8.9 0.0 3.2 2 1 1 3 3 3 0 Exonuclease ABC_tran PF00005.27 CCF73410.1 - 0.073 13.6 0.1 0.29 11.6 0.0 2.0 2 0 0 2 2 1 0 ABC transporter RsgA_GTPase PF03193.16 CCF73410.1 - 0.074 13.0 0.0 0.24 11.3 0.0 1.9 1 0 0 1 1 1 0 RsgA GTPase LRRNT PF01462.18 CCF73410.1 - 0.11 12.2 0.1 0.24 11.1 0.1 1.6 1 0 0 1 1 1 0 Leucine rich repeat N-terminal domain AAA_18 PF13238.6 CCF73410.1 - 0.14 12.7 0.0 5.5 7.5 0.0 3.0 3 0 0 3 3 3 0 AAA domain AAA_30 PF13604.6 CCF73410.1 - 0.2 11.4 0.0 0.4 10.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 CCF73412.1 - 4.6e-63 212.7 0.0 7.1e-63 212.1 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 CCF73412.1 - 2.5e-20 72.7 0.1 5.1e-20 71.8 0.1 1.6 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain RsgA_GTPase PF03193.16 CCF73412.1 - 0.0092 15.9 0.2 0.021 14.7 0.1 1.6 2 0 0 2 2 2 1 RsgA GTPase AAA PF00004.29 CCF73412.1 - 0.017 15.5 0.5 0.46 10.9 0.1 2.7 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 CCF73412.1 - 0.026 14.4 0.0 0.045 13.6 0.0 1.3 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NB-ARC PF00931.22 CCF73412.1 - 0.027 13.7 1.1 0.033 13.4 0.2 1.5 2 0 0 2 2 2 0 NB-ARC domain ATPase PF06745.13 CCF73412.1 - 0.041 13.2 1.0 0.08 12.3 1.0 1.5 1 0 0 1 1 1 0 KaiC AAA_16 PF13191.6 CCF73412.1 - 0.062 13.7 0.0 0.18 12.2 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 CCF73412.1 - 0.096 12.6 0.1 0.42 10.5 0.0 2.0 2 0 0 2 2 2 0 NACHT domain T3SS_ATPase_C PF18269.1 CCF73412.1 - 0.096 12.6 0.9 0.55 10.1 0.9 2.2 1 1 0 1 1 1 0 T3SS EscN ATPase C-terminal domain AAA_19 PF13245.6 CCF73412.1 - 0.13 12.6 0.7 0.29 11.4 0.3 1.7 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 CCF73412.1 - 0.15 12.4 0.1 0.51 10.7 0.0 2.0 2 0 0 2 2 1 0 RNA helicase DUF2075 PF09848.9 CCF73412.1 - 0.26 10.5 0.2 0.42 9.8 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) SHMT PF00464.19 CCF73413.1 - 7e-159 528.7 0.0 8.1e-159 528.5 0.0 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase MT-A70 PF05063.14 CCF73414.1 - 6.9e-39 133.5 2.3 2.7e-27 95.8 1.1 2.3 1 1 1 2 2 2 2 MT-A70 Med26 PF08711.11 CCF73415.1 - 2.7e-08 33.7 0.1 7e-08 32.4 0.1 1.8 1 0 0 1 1 1 1 TFIIS helical bundle-like domain Ribosomal_L35p PF01632.19 CCF73417.1 - 2.3e-13 50.4 13.1 1.3e-12 48.0 8.8 2.2 1 1 1 2 2 2 2 Ribosomal protein L35 2TM PF13239.6 CCF73417.1 - 0.074 13.4 1.1 0.12 12.7 1.1 1.5 1 0 0 1 1 1 0 2TM domain Coatomer_WDAD PF04053.14 CCF73418.1 - 1.1e-109 367.4 2.1 1.2e-109 367.4 0.1 2.0 2 0 0 2 2 2 1 Coatomer WD associated region WD40 PF00400.32 CCF73418.1 - 2.4e-20 72.5 14.6 0.0002 22.1 0.0 7.6 7 1 0 7 7 7 5 WD domain, G-beta repeat Nup160 PF11715.8 CCF73418.1 - 0.0089 14.7 1.4 0.01 14.5 0.1 1.8 2 1 0 2 2 2 1 Nucleoporin Nup120/160 FtsQ PF03799.15 CCF73418.1 - 0.041 14.7 0.0 0.11 13.4 0.0 1.6 1 0 0 1 1 1 0 Cell division protein FtsQ SYCE1 PF15233.6 CCF73419.1 - 0.0035 17.4 6.1 0.0042 17.2 6.1 1.2 1 0 0 1 1 1 1 Synaptonemal complex central element protein 1 DUF4142 PF13628.6 CCF73419.1 - 0.027 14.7 0.1 0.033 14.4 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4142) RNB PF00773.19 CCF73420.1 - 2.3e-86 290.1 3.7 4.1e-86 289.3 3.7 1.4 1 0 0 1 1 1 1 RNB domain OB_Dis3 PF17849.1 CCF73420.1 - 4e-08 33.2 0.0 1.1e-07 31.7 0.0 1.8 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) NADPH_Ox PF08414.10 CCF73420.1 - 0.073 13.4 0.0 24 5.3 0.0 2.7 2 0 0 2 2 2 0 Respiratory burst NADPH oxidase CSD2 PF17876.1 CCF73420.1 - 0.13 12.4 0.2 0.86 9.8 0.0 2.6 3 1 0 3 3 3 0 Cold shock domain Exo_endo_phos PF03372.23 CCF73421.1 - 2.5e-06 27.2 0.0 1.8e-05 24.4 0.0 2.2 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family DUF3458_C PF17432.2 CCF73422.1 - 2.3e-86 290.1 0.0 3.5e-86 289.5 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 CCF73422.1 - 9.8e-53 178.9 1.8 2.4e-52 177.6 1.8 1.7 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 CCF73422.1 - 5.1e-22 78.1 0.0 1.6e-21 76.5 0.0 2.0 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 CCF73422.1 - 1.5e-14 54.6 0.9 1.9e-13 51.0 0.0 2.5 2 0 0 2 2 2 1 Peptidase M1 N-terminal domain LcrR PF09621.10 CCF73422.1 - 0.051 13.0 0.1 6.9 6.1 0.0 2.7 2 0 0 2 2 2 0 Type III secretion system regulator (LcrR) Peptidase_M61 PF05299.12 CCF73422.1 - 0.064 13.7 0.0 0.2 12.0 0.0 1.9 1 0 0 1 1 1 0 M61 glycyl aminopeptidase RNase_PH PF01138.21 CCF73424.1 - 8.6e-20 71.6 1.2 1.2e-19 71.1 1.2 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 CCF73424.1 - 0.0069 16.4 0.4 0.015 15.3 0.0 1.7 2 0 0 2 2 2 1 3' exoribonuclease family, domain 2 DUF4441 PF14536.6 CCF73424.1 - 0.018 15.2 0.6 0.044 14.0 0.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4441) DUF4489 PF14879.6 CCF73424.1 - 0.12 12.4 6.5 1.2 9.3 0.3 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF4489) LRR_9 PF14580.6 CCF73425.1 - 4.1e-16 59.0 0.5 8e-16 58.0 0.5 1.4 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 CCF73425.1 - 2.2e-08 34.3 4.2 0.0023 18.3 0.1 2.8 2 1 0 2 2 2 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 CCF73425.1 - 8e-06 25.5 3.5 0.061 13.1 0.1 2.8 2 1 0 2 2 2 2 Leucine rich repeat LRR_6 PF13516.6 CCF73425.1 - 0.049 13.7 0.0 47 4.4 0.0 3.6 3 0 0 3 3 3 0 Leucine Rich repeat LRR_1 PF00560.33 CCF73425.1 - 0.24 12.1 2.8 15 6.6 0.2 3.9 2 2 1 3 3 3 0 Leucine Rich Repeat SDA1 PF05285.12 CCF73425.1 - 1 8.7 21.4 1.3 8.4 21.4 1.1 1 0 0 1 1 1 0 SDA1 DUF4640 PF15480.6 CCF73425.1 - 1.8 8.3 9.3 2.6 7.7 9.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4640) YL1 PF05764.13 CCF73425.1 - 9.3 6.3 26.6 13 5.8 26.6 1.2 1 0 0 1 1 1 0 YL1 nuclear protein Wbp11 PF09429.10 CCF73426.1 - 1.6e-07 31.7 5.2 1.6e-07 31.7 5.2 2.0 3 0 0 3 3 3 1 WW domain binding protein 11 DUF755 PF05501.11 CCF73426.1 - 1.2 9.5 14.9 3 8.1 14.9 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF755) Complex1_LYR PF05347.15 CCF73428.1 - 0.0091 16.0 1.1 0.016 15.2 0.6 1.6 2 0 0 2 2 2 1 Complex 1 protein (LYR family) MFS_1 PF07690.16 CCF73429.1 - 1.7e-06 27.2 8.6 1.9e-06 27.1 8.6 1.1 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1 PF07690.16 CCF73430.1 - 5.7e-14 51.8 5.1 1.8e-08 33.7 0.2 2.4 2 1 0 2 2 2 2 Major Facilitator Superfamily DUF1493 PF07377.12 CCF73431.1 - 0.15 12.5 4.5 15 6.1 1.3 3.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1493) CdiA_C_tRNase PF18664.1 CCF73434.1 - 0.76 10.0 5.6 1.2 9.3 0.2 2.1 1 1 1 2 2 2 0 CdiA C-terminal tRNase domain Ribosomal_L6 PF00347.23 CCF73436.1 - 1.4e-25 89.7 3.3 9.2e-14 51.9 0.2 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Torsin PF06309.11 CCF73436.1 - 0.087 12.9 0.1 0.14 12.3 0.1 1.3 1 0 0 1 1 1 0 Torsin Ribosomal_S15 PF00312.22 CCF73437.1 - 2.2e-15 56.6 0.4 7.1e-15 55.0 0.4 1.9 1 1 0 1 1 1 1 Ribosomal protein S15 TPR_2 PF07719.17 CCF73438.1 - 1.1e-18 65.7 2.0 4.6e-07 29.5 0.0 5.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73438.1 - 7e-18 63.6 3.1 7.3e-08 31.9 0.0 5.0 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 CCF73438.1 - 1.6e-11 43.4 3.3 5.5e-05 23.1 0.2 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 CCF73438.1 - 2.4e-08 34.4 0.2 2.3e-06 28.0 0.3 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 CCF73438.1 - 1e-06 28.3 0.6 0.0021 17.7 0.0 3.5 3 0 0 3 3 3 2 TPR repeat TPR_7 PF13176.6 CCF73438.1 - 5.3e-06 26.1 1.4 0.4 10.8 0.1 4.4 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 CCF73438.1 - 7.8e-06 26.1 3.5 0.0084 16.4 0.7 3.9 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 CCF73438.1 - 1.6e-05 25.3 0.3 0.14 13.1 0.1 3.5 2 1 1 3 3 2 2 Tetratricopeptide repeat TPR_16 PF13432.6 CCF73438.1 - 0.00011 22.7 1.6 0.33 11.7 0.1 3.6 1 1 3 4 4 4 3 Tetratricopeptide repeat TPR_17 PF13431.6 CCF73438.1 - 0.00015 21.9 1.1 0.098 13.1 0.0 4.2 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF73438.1 - 0.00089 19.4 2.8 0.0035 17.5 2.0 2.6 1 1 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 CCF73438.1 - 0.0024 18.4 2.0 1 10.1 0.1 3.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 CCF73438.1 - 0.0087 16.2 0.1 0.19 11.9 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat DUF1664 PF07889.12 CCF73438.1 - 0.18 11.8 1.1 0.42 10.7 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) ANAPC5 PF12862.7 CCF73438.1 - 1.5 8.9 6.2 9.8 6.3 0.9 3.6 2 1 0 2 2 2 0 Anaphase-promoting complex subunit 5 PHM7_cyt PF14703.6 CCF73440.1 - 0.066 13.4 0.1 0.25 11.6 0.0 2.0 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter SPC12 PF06645.13 CCF73441.1 - 6.1e-16 58.3 5.6 6.5e-16 58.2 5.6 1.0 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) ATPase_gene1 PF09527.10 CCF73441.1 - 0.0038 17.4 5.1 0.0046 17.1 5.1 1.1 1 0 0 1 1 1 1 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter RF-1 PF00472.20 CCF73443.1 - 1.3e-32 112.2 1.6 2e-32 111.5 1.6 1.3 1 0 0 1 1 1 1 RF-1 domain PCRF PF03462.18 CCF73443.1 - 8.9e-18 64.8 0.0 3.7e-17 62.8 0.0 1.8 2 0 0 2 2 2 1 PCRF domain SpoOE-like PF09388.10 CCF73443.1 - 0.029 14.3 1.7 0.077 12.9 1.7 1.8 1 0 0 1 1 1 0 Spo0E like sporulation regulatory protein HMMR_C PF15908.5 CCF73443.1 - 0.066 13.5 0.3 0.11 12.7 0.3 1.3 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal TBP PF00352.21 CCF73444.1 - 2.9e-25 88.0 3.5 1.4e-08 34.6 1.0 4.6 3 1 0 3 3 3 3 Transcription factor TFIID (or TATA-binding protein, TBP) UFC1 PF08694.11 CCF73445.1 - 5.8e-69 230.6 0.1 6.3e-69 230.5 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-fold modifier-conjugating enzyme 1 UQ_con PF00179.26 CCF73445.1 - 1.3e-05 24.8 0.3 3.4e-05 23.5 0.3 1.7 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 CCF73445.1 - 0.059 13.7 0.1 0.074 13.3 0.1 1.3 1 1 0 1 1 1 0 RWD domain UEV PF05743.13 CCF73445.1 - 0.079 12.8 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 UEV domain Prok-E2_B PF14461.6 CCF73445.1 - 0.11 12.2 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B WYL_2 PF10902.8 CCF73447.1 - 0.13 12.7 0.1 0.3 11.5 0.1 1.6 1 0 0 1 1 1 0 WYL_2, Sm-like SH3 beta-barrel fold MIF4G PF02854.19 CCF73448.1 - 0.0076 15.9 4.3 0.0076 15.9 4.3 3.1 3 0 0 3 3 3 1 MIF4G domain LRR_9 PF14580.6 CCF73450.1 - 4.4e-60 202.1 0.8 4.9e-60 202.0 0.8 1.0 1 0 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 CCF73450.1 - 1.3e-09 38.1 6.0 4.4e-06 26.9 0.0 3.7 1 1 3 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 CCF73450.1 - 7.5e-08 32.0 2.3 1.9e-06 27.6 0.3 3.3 3 1 0 3 3 3 1 Leucine rich repeat LRR_6 PF13516.6 CCF73450.1 - 0.011 15.7 1.9 1.1e+02 3.3 0.1 4.4 4 0 0 4 4 4 0 Leucine Rich repeat OSCP PF00213.18 CCF73450.1 - 0.048 13.8 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 ATP synthase delta (OSCP) subunit Ephrin_rec_like PF07699.13 CCF73451.1 - 6e-19 67.6 101.5 1.6e-08 34.1 2.3 12.6 12 1 0 12 12 12 7 Putative ephrin-receptor like PAN_4 PF14295.6 CCF73451.1 - 1.4 8.9 6.8 0.15 12.0 0.4 2.8 2 0 0 2 2 2 0 PAN domain PP-binding_2 PF14573.6 CCF73452.1 - 1e-09 38.5 1.1 1.5e-09 37.9 1.1 1.3 1 0 0 1 1 1 1 Acyl-carrier PP-binding PF00550.25 CCF73452.1 - 0.00028 21.2 0.0 0.00077 19.8 0.0 1.9 2 1 0 2 2 2 1 Phosphopantetheine attachment site Ribosomal_L50 PF10501.9 CCF73452.1 - 0.018 15.2 0.1 0.043 13.9 0.0 1.6 2 0 0 2 2 2 0 Ribosomal subunit 39S Ribosomal_L12_N PF16320.5 CCF73452.1 - 1.3 8.8 3.3 2.6 7.8 0.3 2.2 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain Tau95 PF09734.9 CCF73453.1 - 4.1e-26 92.5 0.1 8.1e-26 91.5 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain Tau95_N PF17682.1 CCF73453.1 - 0.063 13.5 0.0 0.17 12.1 0.0 1.8 1 0 0 1 1 1 0 Tau95 Triple barrel domain Ephrin_rec_like PF07699.13 CCF73454.1 - 1.3e-35 120.9 117.4 3.6e-11 42.7 1.8 12.6 11 2 1 12 12 12 8 Putative ephrin-receptor like Tim54 PF11711.8 CCF73454.1 - 0.037 12.8 2.6 0.063 12.1 2.6 1.3 1 0 0 1 1 1 0 Inner membrane protein import complex subunit Tim54 TACI-CRD2 PF09305.10 CCF73454.1 - 0.06 13.4 2.1 0.53 10.3 2.1 2.8 1 0 0 1 1 1 0 TACI, cysteine-rich domain MCM_bind PF09739.9 CCF73454.1 - 0.23 9.9 2.2 0.35 9.3 2.2 1.1 1 0 0 1 1 1 0 Mini-chromosome maintenance replisome factor Apt1 PF10351.9 CCF73454.1 - 1.1 8.0 6.0 1.8 7.4 6.0 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain SAPS PF04499.15 CCF73454.1 - 1.6 7.4 4.2 2.5 6.8 4.2 1.1 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein SpoIIIAH PF12685.7 CCF73454.1 - 5.8 6.7 13.3 11 5.8 13.3 1.3 1 0 0 1 1 1 0 SpoIIIAH-like protein TFCD_C PF12612.8 CCF73456.1 - 0.35 10.7 7.0 0.065 13.1 0.3 3.1 3 1 0 3 3 3 0 Tubulin folding cofactor D C terminal Pox_polyA_pol_N PF12630.7 CCF73459.1 - 2.6 8.4 7.2 2.4 8.5 1.1 2.6 2 0 0 2 2 2 0 Poxvirus poly(A) polymerase N-terminal domain IPPT PF01715.17 CCF73460.1 - 3.4e-55 187.3 0.4 4.3e-55 187.0 0.4 1.1 1 0 0 1 1 1 1 IPP transferase IPT PF01745.16 CCF73460.1 - 0.00035 20.0 0.0 0.00086 18.8 0.0 1.6 1 0 0 1 1 1 1 Isopentenyl transferase AAA_18 PF13238.6 CCF73460.1 - 0.012 16.2 2.7 4.4 7.9 0.1 2.8 2 1 0 3 3 3 0 AAA domain AAA_33 PF13671.6 CCF73460.1 - 0.044 14.0 0.0 0.39 10.9 0.0 2.4 3 0 0 3 3 3 0 AAA domain ER PF01133.17 CCF73460.1 - 0.048 13.7 1.8 0.086 12.9 0.6 2.1 2 0 0 2 2 2 0 Enhancer of rudimentary PhoH PF02562.16 CCF73460.1 - 0.078 12.4 0.0 0.19 11.1 0.0 1.7 1 0 0 1 1 1 0 PhoH-like protein RRM_1 PF00076.22 CCF73461.1 - 1.5e-08 34.3 0.1 2.8e-08 33.5 0.1 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NUC153 PF08159.12 CCF73464.1 - 8.9e-07 28.6 0.1 8.9e-07 28.6 0.1 2.4 2 0 0 2 2 2 1 NUC153 domain DUF4672 PF15716.5 CCF73464.1 - 0.085 12.5 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4672) BLOC1_2 PF10046.9 CCF73465.1 - 0.002 18.4 6.3 0.002 18.4 6.3 5.0 3 2 2 5 5 5 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF948 PF06103.11 CCF73465.1 - 0.015 15.6 2.5 0.31 11.3 0.2 3.8 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) Cpn60_TCP1 PF00118.24 CCF73466.1 - 1.8e-141 472.1 4.7 2.1e-141 471.9 4.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Dak2 PF02734.17 CCF73466.1 - 0.12 12.2 1.4 0.26 11.2 0.1 2.1 2 0 0 2 2 2 0 DAK2 domain RF-1 PF00472.20 CCF73467.1 - 1.1e-15 57.6 0.7 1.3e-15 57.3 0.7 1.1 1 0 0 1 1 1 1 RF-1 domain TMEM132D_N PF15705.5 CCF73467.1 - 0.056 13.3 0.1 0.14 12.0 0.0 1.7 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, N-term RRM_1 PF00076.22 CCF73472.1 - 3.8e-29 100.3 0.0 1.8e-14 53.3 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF73472.1 - 0.00025 21.1 0.0 0.00091 19.3 0.0 2.0 1 1 0 1 1 1 1 RNA recognition motif RRM_3 PF08777.11 CCF73472.1 - 0.023 14.7 0.2 0.12 12.4 0.0 2.0 2 0 0 2 2 2 0 RNA binding motif RlmM_FDX PF18125.1 CCF73472.1 - 0.028 14.9 0.0 0.062 13.8 0.0 1.5 1 0 0 1 1 1 0 RlmM ferredoxin-like domain Edc3_linker PF16598.5 CCF73472.1 - 0.036 14.7 5.0 2.1 9.0 3.3 3.0 3 0 0 3 3 3 0 Linker region of enhancer of mRNA-decapping protein 3 DAO PF01266.24 CCF73473.1 - 9.3e-42 143.9 0.0 1.2e-41 143.5 0.0 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 CCF73473.1 - 1.7e-29 102.2 0.0 3.1e-29 101.4 0.0 1.4 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_3 PF01494.19 CCF73473.1 - 1.7e-05 24.3 0.1 0.0094 15.2 0.1 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_binding_2 PF00890.24 CCF73473.1 - 1.7e-05 24.1 3.2 0.00021 20.5 0.7 2.2 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 CCF73473.1 - 0.0016 17.7 0.0 0.0036 16.6 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 CCF73473.1 - 0.0026 17.0 0.0 0.0053 16.0 0.0 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 CCF73473.1 - 0.013 14.6 2.4 0.021 13.9 0.3 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 CCF73473.1 - 0.014 14.7 1.3 0.034 13.5 0.4 1.8 2 0 0 2 2 2 0 FAD dependent oxidoreductase HI0933_like PF03486.14 CCF73473.1 - 0.021 13.6 0.2 0.032 12.9 0.2 1.2 1 0 0 1 1 1 0 HI0933-like protein NAD_binding_8 PF13450.6 CCF73473.1 - 0.032 14.4 0.6 0.078 13.2 0.6 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain Lycopene_cycl PF05834.12 CCF73473.1 - 0.061 12.4 0.2 0.11 11.5 0.2 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein Pyr_redox PF00070.27 CCF73473.1 - 0.27 11.8 1.8 0.48 11.0 0.2 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Sec63 PF02889.16 CCF73475.1 - 1e-130 434.5 3.0 7.5e-77 258.0 0.4 3.1 3 0 0 3 3 3 2 Sec63 Brl domain DEAD PF00270.29 CCF73475.1 - 5.3e-35 120.8 0.0 5e-25 88.3 0.0 2.8 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_PWI PF18149.1 CCF73475.1 - 6.5e-32 110.0 2.1 6.5e-32 110.0 2.1 2.4 2 0 0 2 2 2 1 N-terminal helicase PWI domain ResIII PF04851.15 CCF73475.1 - 5e-10 39.6 0.0 3.1e-09 37.1 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CCF73475.1 - 3.5e-08 33.8 0.1 1.1e-06 29.0 0.0 3.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 CCF73475.1 - 0.074 13.3 1.2 4.4 7.6 0.4 3.6 3 1 0 3 3 3 0 AAA domain AAA_30 PF13604.6 CCF73475.1 - 0.2 11.4 0.0 0.52 10.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain RNA_pol_Rpb2_6 PF00562.28 CCF73476.1 - 1e-120 403.4 0.2 3.8e-120 401.5 0.2 1.9 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 CCF73476.1 - 1.3e-44 152.2 0.1 2.2e-44 151.4 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_7 PF04560.20 CCF73476.1 - 3.2e-30 104.4 0.2 9.7e-30 102.8 0.2 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 CCF73476.1 - 3.1e-23 82.4 0.3 6.1e-23 81.4 0.3 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_4 PF04566.13 CCF73476.1 - 5.3e-23 81.1 0.1 1.1e-22 80.1 0.1 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_3 PF04565.16 CCF73476.1 - 5.9e-22 77.6 0.0 1.3e-21 76.6 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_5 PF04567.17 CCF73476.1 - 9.5e-07 29.3 0.0 3.4e-06 27.5 0.0 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 Ribosom_S12_S23 PF00164.25 CCF73477.1 - 3.5e-49 165.2 0.4 4.8e-49 164.7 0.4 1.2 1 0 0 1 1 1 1 Ribosomal protein S12/S23 ATG16 PF08614.11 CCF73479.1 - 0.00042 20.6 2.6 0.001 19.4 2.6 1.6 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Spc7 PF08317.11 CCF73479.1 - 0.00049 19.1 7.2 0.00074 18.5 7.2 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein Myosin_tail_1 PF01576.19 CCF73479.1 - 0.0013 16.7 2.4 0.0016 16.3 2.4 1.1 1 0 0 1 1 1 1 Myosin tail Prominin PF05478.11 CCF73479.1 - 0.0018 16.3 3.6 0.0028 15.7 3.6 1.3 1 0 0 1 1 1 1 Prominin TPR_MLP1_2 PF07926.12 CCF73479.1 - 0.0021 18.1 6.8 0.0045 17.0 6.8 1.5 1 0 0 1 1 1 1 TPR/MLP1/MLP2-like protein Jnk-SapK_ap_N PF09744.9 CCF73479.1 - 0.0023 18.2 5.5 0.0041 17.3 5.5 1.3 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 ADIP PF11559.8 CCF73479.1 - 0.0027 17.8 8.0 0.006 16.7 8.0 1.6 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding GAS PF13851.6 CCF73479.1 - 0.0029 17.0 9.8 0.0048 16.3 9.8 1.3 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding PAH PF02671.21 CCF73479.1 - 0.0035 17.5 0.1 0.013 15.6 0.1 2.0 1 0 0 1 1 1 1 Paired amphipathic helix repeat Uso1_p115_C PF04871.13 CCF73479.1 - 0.0057 17.0 3.9 0.0057 17.0 3.9 1.7 2 0 0 2 2 2 1 Uso1 / p115 like vesicle tethering protein, C terminal region zf-C4H2 PF10146.9 CCF73479.1 - 0.0057 17.0 5.2 0.0076 16.6 5.2 1.1 1 0 0 1 1 1 1 Zinc finger-containing protein Exonuc_VII_L PF02601.15 CCF73479.1 - 0.0074 15.9 2.9 0.0092 15.6 2.9 1.2 1 0 0 1 1 1 1 Exonuclease VII, large subunit APG6_N PF17675.1 CCF73479.1 - 0.0076 16.8 5.6 0.0076 16.8 5.6 1.6 2 0 0 2 2 1 1 Apg6 coiled-coil region Sec34 PF04136.15 CCF73479.1 - 0.011 15.7 5.3 0.011 15.7 5.3 1.9 2 1 0 2 2 2 0 Sec34-like family CEP63 PF17045.5 CCF73479.1 - 0.017 15.0 5.7 0.026 14.5 5.7 1.2 1 0 0 1 1 1 0 Centrosomal protein of 63 kDa DivIC PF04977.15 CCF73479.1 - 0.054 13.3 9.8 0.12 12.1 5.2 2.4 1 1 1 2 2 2 0 Septum formation initiator bZIP_1 PF00170.21 CCF73479.1 - 0.06 13.5 2.0 0.06 13.5 2.0 2.3 2 0 0 2 2 2 0 bZIP transcription factor WHEP-TRS PF00458.20 CCF73479.1 - 0.07 13.3 0.2 0.17 12.0 0.2 1.6 1 0 0 1 1 1 0 WHEP-TRS domain LOH1CR12 PF10158.9 CCF73479.1 - 0.1 12.6 5.8 0.16 12.0 2.9 2.1 2 0 0 2 2 2 0 Tumour suppressor protein RST PF12174.8 CCF73479.1 - 0.11 12.4 2.8 0.36 10.8 0.1 2.6 2 1 1 3 3 3 0 RCD1-SRO-TAF4 (RST) plant domain ABC_tran_CTD PF16326.5 CCF73479.1 - 0.12 12.7 5.5 1.6 9.0 4.5 2.8 1 1 1 2 2 2 0 ABC transporter C-terminal domain Fez1 PF06818.15 CCF73479.1 - 0.16 12.4 6.7 0.23 11.9 6.6 1.3 1 1 0 1 1 1 0 Fez1 DUF1664 PF07889.12 CCF73479.1 - 0.18 11.9 4.4 0.48 10.5 3.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) SAGA-Tad1 PF12767.7 CCF73479.1 - 0.2 11.4 5.4 1.4 8.7 0.1 2.1 1 1 1 2 2 2 0 Transcriptional regulator of RNA polII, SAGA, subunit Glutaredoxin2_C PF04399.13 CCF73479.1 - 0.29 11.0 4.3 0.54 10.1 0.7 2.4 2 0 0 2 2 2 0 Glutaredoxin 2, C terminal domain DUF3450 PF11932.8 CCF73479.1 - 0.33 10.2 8.6 0.71 9.1 6.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) TMF_TATA_bd PF12325.8 CCF73479.1 - 0.34 11.1 6.5 1.8 8.8 5.4 2.2 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding BST2 PF16716.5 CCF73479.1 - 0.47 11.1 7.7 11 6.7 1.9 3.1 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 Csm1_N PF18504.1 CCF73479.1 - 1.1 9.7 7.1 4.2 7.8 0.4 2.5 1 1 0 2 2 2 0 Csm1 N-terminal domain LETM1 PF07766.13 CCF73479.1 - 1.6 8.0 10.1 3 7.1 1.9 2.4 2 1 0 2 2 2 0 LETM1-like protein BRE1 PF08647.11 CCF73479.1 - 3.1 7.9 11.7 1.3 9.1 7.7 2.4 2 1 0 2 2 1 0 BRE1 E3 ubiquitin ligase DUF16 PF01519.16 CCF73479.1 - 3.3 8.2 9.8 0.63 10.6 6.0 1.7 2 0 0 2 2 1 0 Protein of unknown function DUF16 Met_10 PF02475.16 CCF73480.1 - 4.1e-57 193.1 0.3 7.3e-57 192.3 0.3 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Ribosomal_S17e PF00833.18 CCF73480.1 - 1.9e-55 186.0 2.0 3.5e-55 185.2 2.0 1.4 1 0 0 1 1 1 1 Ribosomal S17 TRM PF02005.16 CCF73480.1 - 0.00098 18.4 0.1 0.0019 17.4 0.1 1.4 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Methyltransf_15 PF09445.10 CCF73480.1 - 0.0066 16.0 0.1 0.027 14.0 0.0 2.2 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase PrmA PF06325.13 CCF73480.1 - 0.03 13.7 0.0 0.056 12.8 0.0 1.4 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) PPTA PF01239.22 CCF73481.1 - 5.3e-23 80.0 13.5 4.4e-07 29.4 1.0 5.2 5 0 0 5 5 5 4 Protein prenyltransferase alpha subunit repeat Myb_DNA-bind_6 PF13921.6 CCF73483.1 - 0.089 13.1 0.0 0.25 11.6 0.0 1.8 1 0 0 1 1 1 0 Myb-like DNA-binding domain SWIRM-assoc_1 PF16495.5 CCF73483.1 - 0.31 11.0 4.0 0.48 10.4 4.0 1.3 1 0 0 1 1 1 0 SWIRM-associated region 1 SWIRM PF04433.17 CCF73484.1 - 0.0003 21.1 0.4 0.00075 19.8 0.4 1.7 1 1 0 1 1 1 1 SWIRM domain Svs_4_5_6 PF17381.2 CCF73484.1 - 0.051 14.5 0.1 0.1 13.6 0.1 1.5 1 0 0 1 1 1 0 Seminal vesicle secretory proteins 4/5/6 DUF3276 PF11680.8 CCF73484.1 - 0.098 12.8 3.3 5 7.3 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3276) GDI PF00996.18 CCF73485.1 - 1.2e-187 623.8 0.2 1.4e-187 623.6 0.2 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor NAD_binding_8 PF13450.6 CCF73485.1 - 0.0099 16.1 0.0 0.025 14.8 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_3 PF01494.19 CCF73485.1 - 0.2 10.8 0.1 0.31 10.2 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain Ribosomal_S19e PF01090.19 CCF73486.1 - 4.9e-52 175.3 0.0 5.7e-52 175.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e Ribosomal_L7Ae PF01248.26 CCF73487.1 - 1.1e-23 82.8 0.0 1.4e-23 82.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family eIF-5_eIF-2B PF01873.17 CCF73488.1 - 6.5e-35 119.5 0.0 2.1e-34 117.9 0.0 1.9 2 0 0 2 2 2 1 Domain found in IF2B/IF5 W2 PF02020.18 CCF73488.1 - 8.6e-10 38.6 0.9 2.9e-09 36.9 0.9 2.0 1 0 0 1 1 1 1 eIF4-gamma/eIF5/eIF2-epsilon Hormone_6 PF00236.18 CCF73488.1 - 0.019 15.0 0.3 0.043 13.8 0.3 1.6 1 0 0 1 1 1 0 Glycoprotein hormone UNC45-central PF11701.8 CCF73488.1 - 0.025 14.5 0.8 0.83 9.6 0.1 2.3 2 0 0 2 2 2 0 Myosin-binding striated muscle assembly central zf-TFIIB PF13453.6 CCF73488.1 - 0.55 9.6 2.9 0.85 9.0 0.7 2.2 2 0 0 2 2 2 0 Transcription factor zinc-finger RNA_pol_Rpc4 PF05132.14 CCF73488.1 - 2.6 8.5 7.9 0.41 11.1 2.0 2.2 2 0 0 2 2 2 0 RNA polymerase III RPC4 Ureide_permease PF07168.11 CCF73488.1 - 3 6.5 5.8 3.8 6.2 1.1 2.3 2 0 0 2 2 2 0 Ureide permease DUF2012 PF09430.10 CCF73489.1 - 5.6e-05 23.2 0.0 8.6e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2012) CarboxypepD_reg PF13620.6 CCF73489.1 - 0.016 15.4 0.0 0.03 14.6 0.0 1.4 1 0 0 1 1 1 0 Carboxypeptidase regulatory-like domain Mago-bind PF09282.10 CCF73490.1 - 5e-14 51.9 5.5 9.2e-14 51.0 5.5 1.5 1 0 0 1 1 1 1 Mago binding WW PF00397.26 CCF73490.1 - 0.035 14.2 0.2 0.08 13.1 0.0 1.7 2 0 0 2 2 2 0 WW domain LSM PF01423.22 CCF73491.1 - 2.1e-17 62.6 0.0 2.6e-17 62.3 0.0 1.1 1 0 0 1 1 1 1 LSM domain BRCA-2_helical PF09169.10 CCF73491.1 - 0.18 11.5 0.0 0.19 11.4 0.0 1.1 1 0 0 1 1 1 0 BRCA2, helical zf-C2H2 PF00096.26 CCF73492.1 - 7.5e-11 41.9 46.6 1.6e-06 28.3 4.0 6.0 6 0 0 6 6 6 5 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 CCF73492.1 - 3.3e-06 27.5 33.7 0.0001 22.9 1.5 6.3 6 0 0 6 6 6 3 C2H2-type zinc finger zf-C2H2_8 PF15909.5 CCF73492.1 - 0.0019 18.5 2.4 0.0019 18.5 2.4 2.9 1 1 1 3 3 3 1 C2H2-type zinc ribbon zf-Di19 PF05605.12 CCF73492.1 - 0.006 16.9 1.5 0.006 16.9 1.5 3.6 2 2 1 4 4 4 2 Drought induced 19 protein (Di19), zinc-binding zf-C2H2_6 PF13912.6 CCF73492.1 - 0.017 15.1 2.1 0.017 15.1 2.1 3.5 3 1 0 3 3 3 0 C2H2-type zinc finger WD40 PF00400.32 CCF73493.1 - 3.3e-28 97.4 24.1 1.5e-06 28.8 0.2 6.9 7 0 0 7 7 7 6 WD domain, G-beta repeat MPC PF03650.13 CCF73493.1 - 5e-25 87.8 0.3 1.7e-24 86.1 0.3 1.9 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers ANAPC4_WD40 PF12894.7 CCF73493.1 - 6.6e-13 48.8 7.4 0.015 15.6 0.1 4.9 2 2 1 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 CCF73493.1 - 0.0073 15.7 1.5 2.2 7.5 0.0 2.6 2 1 0 2 2 2 2 WD40-like domain zf-Tim10_DDP PF02953.15 CCF73494.1 - 5.6e-09 35.5 1.1 1.6e-08 34.1 0.1 2.2 2 0 0 2 2 2 1 Tim10/DDP family zinc finger RasGEF_N PF00618.20 CCF73495.1 - 1.3 9.3 6.2 0.24 11.7 0.9 2.5 3 0 0 3 3 3 0 RasGEF N-terminal motif SET PF00856.28 CCF73496.1 - 0.011 16.2 0.3 0.011 16.2 0.3 2.4 1 1 0 2 2 2 0 SET domain Ribosomal_L28e PF01778.17 CCF73497.1 - 3.1e-27 95.6 0.8 3.1e-27 95.6 0.8 2.1 1 1 1 2 2 2 1 Ribosomal L28e protein family Mak16 PF04874.14 CCF73497.1 - 6.9e-18 65.1 1.3 1.3e-17 64.2 1.3 1.5 1 0 0 1 1 1 1 Mak16 protein C-terminal region SUKH_5 PF14567.6 CCF73497.1 - 0.0072 16.1 0.1 0.04 13.7 0.1 2.1 1 1 1 2 2 2 1 SMI1-KNR4 cell-wall ST7 PF04184.12 CCF73497.1 - 0.052 12.0 1.1 0.063 11.7 1.1 1.1 1 0 0 1 1 1 0 ST7 protein DUF3523 PF12037.8 CCF73498.1 - 3.8e-78 262.5 26.2 5.2e-78 262.1 26.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) AAA PF00004.29 CCF73498.1 - 8.8e-27 94.1 0.0 2.1e-26 92.9 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 CCF73498.1 - 4.8e-08 32.9 0.0 1.9e-07 30.9 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CCF73498.1 - 0.00011 22.7 6.8 0.0094 16.4 0.0 3.5 2 2 1 3 3 2 2 AAA ATPase domain AAA_24 PF13479.6 CCF73498.1 - 0.00014 21.6 0.1 0.0011 18.8 0.1 2.4 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CCF73498.1 - 0.00029 21.1 4.0 0.027 14.7 0.0 3.4 3 1 0 3 3 2 1 AAA domain AAA_5 PF07728.14 CCF73498.1 - 0.0031 17.5 1.4 0.018 15.1 0.0 2.9 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) Sigma54_activ_2 PF14532.6 CCF73498.1 - 0.004 17.3 0.0 0.011 15.9 0.0 1.7 1 0 0 1 1 1 1 Sigma-54 interaction domain ATPase PF06745.13 CCF73498.1 - 0.0044 16.4 0.5 0.015 14.6 0.0 2.1 2 1 0 2 2 2 1 KaiC Mg_chelatase PF01078.21 CCF73498.1 - 0.005 16.2 0.4 0.023 14.1 0.0 2.2 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 CCF73498.1 - 0.0052 17.0 1.1 0.01 16.0 0.0 2.1 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 CCF73498.1 - 0.0056 16.2 0.0 0.08 12.5 0.0 2.5 3 0 0 3 3 3 1 P-loop containing dynein motor region TIP49 PF06068.13 CCF73498.1 - 0.0076 15.5 0.0 0.0076 15.5 0.0 2.6 2 1 1 3 3 2 1 TIP49 P-loop domain TsaE PF02367.17 CCF73498.1 - 0.0089 16.0 0.8 0.018 15.0 0.0 1.9 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 CCF73498.1 - 0.013 16.0 0.0 0.013 16.0 0.0 2.8 3 2 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 CCF73498.1 - 0.014 15.7 0.0 0.057 13.8 0.0 2.1 1 0 0 1 1 1 0 RNA helicase Parvo_NS1 PF01057.17 CCF73498.1 - 0.017 14.3 0.8 0.034 13.3 0.0 1.9 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 ATP-synt_ab PF00006.25 CCF73498.1 - 0.036 13.7 0.0 0.078 12.6 0.0 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_3 PF07726.11 CCF73498.1 - 0.039 13.8 0.0 0.078 12.8 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zot PF05707.12 CCF73498.1 - 0.068 12.8 2.2 0.29 10.7 0.0 2.7 2 1 1 3 3 3 0 Zonular occludens toxin (Zot) AAA_11 PF13086.6 CCF73498.1 - 0.6 9.8 0.0 0.6 9.8 0.0 3.1 2 1 0 2 2 1 0 AAA domain Ins_P5_2-kin PF06090.12 CCF73499.1 - 5.3e-12 45.8 0.9 8.5e-12 45.1 0.9 1.4 1 1 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase Rpr2 PF04032.16 CCF73500.1 - 4.5e-06 26.9 0.1 5.2e-06 26.7 0.1 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain Rhomboid PF01694.22 CCF73502.1 - 0.0011 19.0 11.4 0.0011 19.0 11.4 2.5 2 1 0 2 2 2 1 Rhomboid family Ferlin_C PF16165.5 CCF73502.1 - 0.85 9.5 4.8 1.6 8.7 0.1 2.4 2 0 0 2 2 2 0 Ferlin C-terminus DUF1774 PF08611.10 CCF73502.1 - 8.8 6.7 10.3 0.18 12.1 0.4 2.6 3 0 0 3 3 3 0 Fungal protein of unknown function (DUF1774) Afaf PF15339.6 CCF73502.1 - 8.8 6.0 5.8 27 4.4 0.9 2.9 3 0 0 3 3 3 0 Acrosome formation-associated factor GTP_EFTU PF00009.27 CCF73503.1 - 1e-57 194.9 0.0 1.4e-57 194.4 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 CCF73503.1 - 1.4e-21 76.9 0.0 3.8e-21 75.5 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 CCF73503.1 - 4.3e-12 46.2 2.2 8.7e-12 45.3 2.2 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF73503.1 - 2e-05 24.6 0.0 3.6e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 CCF73503.1 - 0.011 15.4 0.2 0.029 14.0 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 CCF73503.1 - 0.055 13.4 0.0 0.16 11.8 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase ATP_bind_1 PF03029.17 CCF73503.1 - 0.084 12.6 0.8 6.5 6.5 0.0 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TMA7 PF09072.10 CCF73504.1 - 1.1e-05 26.2 16.1 2e-05 25.3 16.1 1.5 1 1 0 1 1 1 1 Translation machinery associated TMA7 Ribosomal_S3Ae PF01015.18 CCF73505.1 - 7.8e-88 293.3 3.2 9.4e-88 293.1 3.2 1.1 1 0 0 1 1 1 1 Ribosomal S3Ae family DNMT1-RFD PF12047.8 CCF73505.1 - 0.0081 16.2 0.1 0.56 10.2 0.1 2.3 2 0 0 2 2 2 1 Cytosine specific DNA methyltransferase replication foci domain APG5 PF04106.12 CCF73505.1 - 0.09 12.3 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Autophagy protein Apg5 Phage_int_SAM_5 PF13102.6 CCF73506.1 - 2.3 8.6 8.2 0.98 9.8 1.2 3.7 4 0 0 4 4 4 0 Phage integrase SAM-like domain CDC50 PF03381.15 CCF73507.1 - 9e-24 84.5 5.1 1.7e-23 83.5 5.1 1.7 1 1 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Pox_A9 PF04835.12 CCF73507.1 - 0.079 13.1 0.4 0.18 12.0 0.4 1.6 1 0 0 1 1 1 0 A9 protein conserved region Cpn60_TCP1 PF00118.24 CCF73508.1 - 6.6e-154 513.2 9.5 7.5e-154 513.0 9.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Methyltransf_16 PF10294.9 CCF73509.1 - 6e-09 35.9 0.0 3.6e-05 23.6 0.0 2.4 2 0 0 2 2 2 2 Lysine methyltransferase Methyltransf_23 PF13489.6 CCF73509.1 - 0.00029 20.7 0.0 0.00069 19.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CCF73509.1 - 0.00088 18.9 0.0 0.0016 18.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 CCF73509.1 - 0.0037 17.1 0.1 1.1 9.1 0.1 2.5 2 0 0 2 2 2 2 Methyltransferase domain TehB PF03848.14 CCF73509.1 - 0.0038 16.7 0.1 0.0089 15.5 0.1 1.6 1 0 0 1 1 1 1 Tellurite resistance protein TehB TFIIF_beta PF02270.15 CCF73509.1 - 0.03 14.5 0.0 0.082 13.1 0.0 1.7 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain Ank_5 PF13857.6 CCF73511.1 - 7.3e-32 109.0 1.5 4e-11 42.9 0.1 4.8 3 1 1 4 4 4 4 Ankyrin repeats (many copies) Ank_4 PF13637.6 CCF73511.1 - 6.8e-30 103.1 2.5 7.6e-11 42.3 0.1 4.0 3 1 0 3 3 3 3 Ankyrin repeats (many copies) Ank_2 PF12796.7 CCF73511.1 - 8.8e-28 96.7 2.0 3.8e-11 43.4 0.1 3.5 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) RNA_GG_bind PF10258.9 CCF73511.1 - 5.7e-22 77.6 0.0 1.2e-21 76.5 0.0 1.6 1 0 0 1 1 1 1 PHAX RNA-binding domain Ank_3 PF13606.6 CCF73511.1 - 1.3e-19 68.2 3.5 0.025 15.1 0.0 7.3 7 0 0 7 7 7 5 Ankyrin repeat Ank PF00023.30 CCF73511.1 - 4.1e-17 61.8 3.0 0.0006 20.1 0.0 6.2 5 1 1 6 6 6 4 Ankyrin repeat PhoD PF09423.10 CCF73512.1 - 1.9e-12 46.9 0.0 1.2e-08 34.4 0.0 2.2 2 0 0 2 2 2 2 PhoD-like phosphatase Beta-Casp PF10996.8 CCF73513.1 - 2.5e-22 79.3 0.0 6.2e-22 78.0 0.0 1.7 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 CCF73513.1 - 2.9e-18 65.5 0.4 4.8e-17 61.6 0.3 2.8 2 1 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 CCF73513.1 - 1.1e-13 51.0 0.0 3.4e-13 49.5 0.0 1.8 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 CCF73513.1 - 1.1e-12 48.4 0.0 8.2e-12 45.5 0.0 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 CCF73513.1 - 0.00099 18.7 0.0 0.003 17.1 0.0 1.8 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 CCF73513.1 - 0.052 13.4 0.0 0.15 11.9 0.0 1.7 1 0 0 1 1 1 0 Beta-lactamase superfamily domain FtsJ PF01728.19 CCF73514.1 - 2.4e-27 96.2 0.0 1e-20 74.6 0.0 2.4 2 0 0 2 2 2 2 FtsJ-like methyltransferase MRP-L20 PF12824.7 CCF73515.1 - 0.1 12.8 0.8 0.18 12.0 0.0 1.7 2 0 0 2 2 2 0 Mitochondrial ribosomal protein subunit L20 CAP_C PF08603.11 CCF73517.1 - 4.1e-28 98.0 7.3 4.8e-28 97.7 7.3 1.0 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal TBCC PF07986.12 CCF73517.1 - 0.0029 17.3 3.9 0.005 16.6 3.9 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C SAP PF02037.27 CCF73518.1 - 4.8e-12 45.3 0.1 8.8e-12 44.5 0.1 1.5 1 0 0 1 1 1 1 SAP domain Telomere_Sde2_2 PF13297.6 CCF73518.1 - 0.027 14.1 0.2 0.088 12.5 0.0 1.9 2 1 0 2 2 2 0 Telomere stability C-terminal GAT PF03127.14 CCF73521.1 - 0.017 15.4 0.1 0.095 13.0 0.1 2.0 2 0 0 2 2 2 0 GAT domain DUF4168 PF13767.6 CCF73521.1 - 0.081 14.1 1.4 0.54 11.5 0.5 2.2 2 1 0 2 2 2 0 Domain of unknown function (DUF4168) Big_2 PF02368.18 CCF73522.1 - 0.01 15.7 0.7 3 7.8 0.5 3.2 2 0 0 2 2 2 0 Bacterial Ig-like domain (group 2) Choline_kinase PF01633.20 CCF73523.1 - 5.6e-37 127.4 0.1 7.8e-37 126.9 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 CCF73523.1 - 7.5e-08 32.6 0.0 1.1e-07 32.0 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 CCF73523.1 - 0.0012 18.2 5.8 0.0014 18.0 3.0 1.9 1 1 1 2 2 2 1 Ecdysteroid kinase RIO1 PF01163.22 CCF73523.1 - 0.12 12.0 0.1 0.21 11.2 0.1 1.4 1 0 0 1 1 1 0 RIO1 family Choline_kinase PF01633.20 CCF73524.1 - 2.4e-24 86.1 0.0 3.7e-24 85.5 0.0 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 CCF73524.1 - 7.8e-05 22.7 0.0 0.00012 22.1 0.0 1.4 1 1 0 1 1 1 1 Phosphotransferase enzyme family DUF1831 PF08866.10 CCF73524.1 - 0.063 13.7 0.3 0.17 12.3 0.2 1.7 1 1 0 1 1 1 0 Putative amino acid metabolism NLRC4_HD PF17889.1 CCF73525.1 - 0.033 14.5 1.6 0.06 13.7 1.6 1.4 1 0 0 1 1 1 0 NLRC4 helical domain DUF4024 PF13216.6 CCF73525.1 - 0.037 14.0 1.3 0.06 13.3 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF4024) ABC_membrane PF00664.23 CCF73528.1 - 1.2e-19 71.0 25.5 1.1e-15 58.0 6.5 2.4 2 0 0 2 2 2 2 ABC transporter transmembrane region ABC_tran PF00005.27 CCF73528.1 - 6e-13 49.5 0.0 1.6e-08 35.1 0.0 2.7 2 0 0 2 2 2 2 ABC transporter AAA_23 PF13476.6 CCF73528.1 - 8.8e-05 23.1 2.5 0.00017 22.2 1.0 2.1 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 CCF73528.1 - 0.0058 16.7 0.1 0.014 15.5 0.1 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_29 PF13555.6 CCF73528.1 - 0.027 14.2 0.3 0.31 10.8 0.1 2.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CCF73528.1 - 0.13 12.2 0.1 0.34 10.8 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase Fe_hyd_lg_C PF02906.14 CCF73529.1 - 2.3e-37 128.9 0.2 5e-37 127.9 0.2 1.6 1 1 0 1 1 1 1 Iron only hydrogenase large subunit, C-terminal domain CST-I PF06002.12 CCF73529.1 - 0.041 13.6 1.5 0.049 13.4 0.4 1.6 2 0 0 2 2 2 0 Alpha-2,3-sialyltransferase (CST-I) Ribosomal_L19e PF01280.20 CCF73531.1 - 6.2e-61 204.7 8.0 6.2e-61 204.7 8.0 1.6 1 1 1 2 2 2 1 Ribosomal protein L19e HMw1_D2 PF18254.1 CCF73531.1 - 0.0076 16.6 0.3 0.017 15.5 0.3 1.5 1 0 0 1 1 1 1 HMW1 domain 2 HhH-GPD PF00730.25 CCF73532.1 - 3.4e-21 75.7 0.0 1.1e-20 74.1 0.0 1.8 2 0 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 CCF73532.1 - 2.7e-09 36.4 0.0 3.1e-07 29.9 0.0 3.3 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_5 PF14520.6 CCF73532.1 - 2.4e-07 31.3 0.1 0.00035 21.1 0.0 2.7 2 0 0 2 2 2 2 Helix-hairpin-helix domain Cdd1 PF11731.8 CCF73532.1 - 0.0019 18.4 0.0 0.0049 17.1 0.0 1.6 1 0 0 1 1 1 1 Pathogenicity locus DUF4332 PF14229.6 CCF73532.1 - 0.02 15.1 0.1 2.2 8.6 0.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4332) IMS_HHH PF11798.8 CCF73532.1 - 0.072 13.4 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 IMS family HHH motif Soyouz_module PF14313.6 CCF73532.1 - 0.16 11.7 0.6 0.69 9.7 0.1 2.2 2 0 0 2 2 2 0 N-terminal region of Paramyxovirinae phosphoprotein (P) Macoilin PF09726.9 CCF73532.1 - 0.19 10.3 9.7 0.2 10.2 9.7 1.1 1 0 0 1 1 1 0 Macoilin family DUF2750 PF11042.8 CCF73533.1 - 0.035 14.2 0.0 0.096 12.8 0.0 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2750) F-box PF00646.33 CCF73534.1 - 0.0002 21.2 0.2 0.0029 17.4 0.2 2.5 2 0 0 2 2 2 1 F-box domain F-box-like PF12937.7 CCF73534.1 - 0.0038 17.1 1.8 0.0077 16.1 1.8 1.5 1 0 0 1 1 1 1 F-box-like AdoHcyase PF05221.17 CCF73536.1 - 3.4e-82 276.0 0.0 4.1e-82 275.7 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 CCF73536.1 - 2.3e-63 213.1 1.8 3.7e-63 212.4 1.8 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 CCF73536.1 - 2.9e-08 33.3 0.3 4.8e-08 32.6 0.3 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 CCF73536.1 - 0.0003 20.4 0.3 0.00059 19.5 0.3 1.5 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain AlaDh_PNT_C PF01262.21 CCF73536.1 - 0.0011 18.3 0.9 0.0023 17.3 0.9 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain CH PF00307.31 CCF73536.1 - 0.0061 16.7 0.1 0.016 15.4 0.1 1.7 1 0 0 1 1 1 1 Calponin homology (CH) domain TrkA_N PF02254.18 CCF73536.1 - 0.0094 16.2 0.3 0.022 15.0 0.3 1.6 1 0 0 1 1 1 1 TrkA-N domain 3HCDH_N PF02737.18 CCF73536.1 - 0.01 15.7 0.3 0.022 14.7 0.3 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 CCF73536.1 - 0.029 13.7 1.4 0.24 10.7 1.4 2.1 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Pyr_redox PF00070.27 CCF73536.1 - 0.035 14.7 2.6 0.35 11.5 0.3 2.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 CCF73536.1 - 0.11 12.5 0.7 0.24 11.5 0.1 1.8 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 CCF73536.1 - 0.17 12.3 0.2 0.36 11.3 0.2 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Phage_RpbA PF10789.9 CCF73537.1 - 0.022 14.8 4.6 0.34 11.0 0.3 2.4 2 0 0 2 2 2 0 Phage RNA polymerase binding, RpbA GWT1 PF06423.12 CCF73538.1 - 1.7e-15 57.5 3.4 1.7e-15 57.5 3.4 2.6 2 1 1 3 3 3 1 GWT1 Afaf PF15339.6 CCF73538.1 - 0.002 17.9 0.1 0.002 17.9 0.1 1.8 2 0 0 2 2 2 1 Acrosome formation-associated factor Glyco_hydro_46 PF01374.18 CCF73539.1 - 0.18 11.4 0.0 0.25 10.9 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolase family 46 Polyketide_cyc PF03364.20 CCF73539.1 - 0.19 12.0 0.0 0.27 11.4 0.0 1.3 1 0 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport eIF3_subunit PF08597.10 CCF73540.1 - 6.1e-12 46.0 4.3 7.5e-12 45.7 4.3 1.2 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit DUF4795 PF16043.5 CCF73540.1 - 0.005 16.5 0.7 0.0073 15.9 0.7 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) Tn7_Tnp_TnsA_N PF08722.11 CCF73540.1 - 0.17 12.1 1.1 0.45 10.7 0.7 2.0 1 1 1 2 2 2 0 TnsA endonuclease N terminal KxDL PF10241.9 CCF73540.1 - 0.28 11.5 2.7 0.57 10.5 0.7 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein YolD PF08863.10 CCF73541.1 - 0.016 15.2 0.1 0.056 13.5 0.1 1.9 1 0 0 1 1 1 0 YolD-like protein IZUMO PF15005.6 CCF73541.1 - 0.22 12.0 0.5 0.58 10.7 0.1 1.9 2 0 0 2 2 2 0 Izumo sperm-egg fusion, Ig domain-associated Peptidase_M54 PF07998.11 CCF73541.1 - 0.27 11.2 4.1 0.24 11.3 0.5 2.1 1 1 1 2 2 2 0 Peptidase family M54 Histone PF00125.24 CCF73543.1 - 1.2e-54 184.2 2.0 1.3e-54 184.1 2.0 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 PAF PF15715.5 CCF73543.1 - 4.4e-05 24.1 1.0 5.4e-05 23.8 1.0 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-S PF15630.6 CCF73543.1 - 0.00016 22.0 0.1 0.00025 21.4 0.1 1.2 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 CCF73543.1 - 0.00037 20.6 0.1 0.0007 19.7 0.1 1.5 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 CCF73543.1 - 0.006 16.8 0.6 0.009 16.3 0.1 1.5 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 CCF73543.1 - 0.0064 16.6 0.2 0.011 15.8 0.0 1.5 2 0 0 2 2 2 1 Transcription initiation factor IID, 31kD subunit TMA7 PF09072.10 CCF73543.1 - 0.14 13.0 2.5 0.28 12.0 2.5 1.5 1 0 0 1 1 1 0 Translation machinery associated TMA7 Histone PF00125.24 CCF73544.1 - 1.8e-13 51.0 0.0 2.2e-13 50.7 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 CCF73544.1 - 1.6e-08 34.1 0.0 2.6e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 CCF73544.1 - 0.0064 16.8 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Adaptin_N PF01602.20 CCF73548.1 - 3.8e-70 236.9 10.5 3.8e-70 236.9 10.5 1.6 2 0 0 2 2 2 1 Adaptin N terminal region AP4E_app_platf PF14807.6 CCF73548.1 - 0.0013 19.0 0.3 0.0052 17.1 0.3 2.2 1 1 0 1 1 1 1 Adaptin AP4 complex epsilon appendage platform Vac14_Fab1_bd PF12755.7 CCF73548.1 - 0.056 14.0 2.5 1 10.0 0.2 3.4 2 1 1 3 3 3 0 Vacuolar 14 Fab1-binding region RasGEF_N_2 PF14663.6 CCF73548.1 - 0.075 13.4 0.6 0.35 11.3 0.6 2.3 1 1 0 1 1 1 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain Arm PF00514.23 CCF73548.1 - 0.18 11.9 0.2 0.64 10.2 0.0 2.0 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat Synaptobrevin PF00957.21 CCF73549.1 - 2.9e-09 36.6 0.2 6.4e-09 35.5 0.2 1.5 1 0 0 1 1 1 1 Synaptobrevin ER PF01133.17 CCF73549.1 - 0.049 13.7 1.4 0.13 12.3 1.4 1.9 1 1 0 1 1 1 0 Enhancer of rudimentary Translat_reg PF01818.17 CCF73549.1 - 0.059 13.4 0.4 0.11 12.5 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage translational regulator Aquarius_N PF16399.5 CCF73550.1 - 5.6e-122 408.4 5.9 3.5e-121 405.8 5.9 2.0 1 1 0 1 1 1 1 Intron-binding protein aquarius N-terminus AAA_12 PF13087.6 CCF73550.1 - 1e-29 103.6 0.0 6.6e-29 101.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 CCF73550.1 - 5e-27 95.3 0.0 1.3e-13 51.4 0.0 2.2 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 CCF73550.1 - 9.7e-09 35.2 0.0 7.9e-05 22.5 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 CCF73550.1 - 1.9e-08 34.8 0.0 3.8e-07 30.5 0.0 2.5 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 CCF73550.1 - 0.00018 21.6 0.1 0.00069 19.7 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 CCF73550.1 - 0.0014 18.4 0.0 0.0063 16.3 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Viral_helicase1 PF01443.18 CCF73550.1 - 0.0019 18.0 0.0 0.072 12.8 0.0 3.0 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase UvrD_C_2 PF13538.6 CCF73550.1 - 0.0062 16.3 0.1 0.014 15.2 0.1 1.7 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain AAA_22 PF13401.6 CCF73550.1 - 0.017 15.4 0.0 0.06 13.6 0.0 1.9 1 0 0 1 1 1 0 AAA domain UvrD-helicase PF00580.21 CCF73550.1 - 0.022 14.3 0.1 0.087 12.3 0.0 2.1 2 0 0 2 2 2 0 UvrD/REP helicase N-terminal domain AAA_16 PF13191.6 CCF73550.1 - 0.047 14.1 0.0 0.12 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain ATP-synt_ab PF00006.25 CCF73550.1 - 0.048 13.3 0.0 0.1 12.3 0.0 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA PF00004.29 CCF73550.1 - 0.093 13.2 0.0 0.37 11.2 0.0 2.1 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Helicase_RecD PF05127.14 CCF73550.1 - 0.11 12.3 0.0 0.54 10.1 0.0 2.0 2 0 0 2 2 2 0 Helicase Zap1_zf2 PF18217.1 CCF73551.1 - 0.056 13.4 0.6 0.2 11.7 0.0 2.3 2 0 0 2 2 2 0 Zap1 zinc finger 2 ArsA_ATPase PF02374.15 CCF73552.1 - 2.6e-97 325.7 0.1 3.1e-97 325.4 0.1 1.0 1 0 0 1 1 1 1 Anion-transporting ATPase CbiA PF01656.23 CCF73552.1 - 2.4e-11 43.8 0.0 9.5e-11 41.9 0.0 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 CCF73552.1 - 3.6e-10 40.0 0.5 2.6e-09 37.3 0.0 2.6 1 1 1 2 2 2 1 AAA domain ParA PF10609.9 CCF73552.1 - 6.5e-07 29.0 0.1 6.3e-06 25.8 0.0 2.1 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 CCF73552.1 - 9.8e-07 28.5 0.0 5.5e-05 22.8 0.0 2.2 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 CCF73552.1 - 6.9e-05 22.4 0.0 0.00092 18.7 0.0 2.2 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family SRP54 PF00448.22 CCF73552.1 - 0.0034 17.0 0.0 0.04 13.6 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain NB-ARC PF00931.22 CCF73552.1 - 0.0075 15.5 0.0 0.014 14.6 0.0 1.4 1 0 0 1 1 1 1 NB-ARC domain APS_kinase PF01583.20 CCF73552.1 - 0.019 14.9 0.1 0.12 12.3 0.0 2.0 2 0 0 2 2 2 0 Adenylylsulphate kinase AAA_25 PF13481.6 CCF73552.1 - 0.03 13.9 0.0 0.079 12.5 0.0 1.7 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 CCF73552.1 - 0.044 13.2 0.0 0.09 12.2 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_18 PF13238.6 CCF73552.1 - 0.086 13.4 0.0 0.19 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CCF73552.1 - 0.19 12.1 0.0 0.42 11.0 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain ATP_bind_1 PF03029.17 CCF73552.1 - 0.2 11.4 1.4 4.1 7.1 0.1 2.4 2 1 1 3 3 3 0 Conserved hypothetical ATP binding protein Arm PF00514.23 CCF73553.1 - 2.6e-05 24.1 0.0 0.041 13.9 0.0 4.2 5 0 0 5 5 5 1 Armadillo/beta-catenin-like repeat HEAT_2 PF13646.6 CCF73553.1 - 0.0019 18.5 0.0 0.019 15.3 0.0 2.5 2 1 0 2 2 2 1 HEAT repeats Adaptin_N PF01602.20 CCF73553.1 - 0.0088 14.7 0.1 0.013 14.1 0.1 1.3 1 0 0 1 1 1 1 Adaptin N terminal region IFRD PF05004.13 CCF73553.1 - 0.076 12.1 0.1 0.11 11.6 0.1 1.4 1 0 0 1 1 1 0 Interferon-related developmental regulator (IFRD) Pkinase PF00069.25 CCF73554.1 - 7.4e-66 222.2 0.0 1.5e-65 221.2 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73554.1 - 8e-30 104.0 0.0 1.4e-29 103.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF73554.1 - 0.00047 19.6 0.0 0.0013 18.1 0.0 1.9 1 1 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 CCF73554.1 - 0.00089 18.3 1.5 0.0043 16.0 1.5 1.9 1 1 0 1 1 1 1 Haspin like kinase domain APH PF01636.23 CCF73554.1 - 0.11 12.5 0.2 0.28 11.1 0.0 1.7 2 1 0 2 2 2 0 Phosphotransferase enzyme family NT-C2 PF10358.9 CCF73557.1 - 1.6e-09 37.7 0.0 3.7e-09 36.4 0.0 1.6 1 0 0 1 1 1 1 N-terminal C2 in EEIG1 and EHBP1 proteins Mer2 PF09074.10 CCF73557.1 - 0.0026 17.6 6.0 0.0049 16.7 6.0 1.4 1 0 0 1 1 1 1 Mer2 Sbi-IV PF11621.8 CCF73557.1 - 0.056 13.8 1.8 0.61 10.5 0.4 2.3 2 0 0 2 2 2 0 C3 binding domain 4 of IgG-bind protein SBI Cortex-I_coil PF09304.10 CCF73557.1 - 0.068 13.4 9.3 0.061 13.5 7.7 1.7 2 0 0 2 2 2 0 Cortexillin I, coiled coil ADIP PF11559.8 CCF73557.1 - 0.07 13.2 7.2 0.28 11.3 0.9 2.3 1 1 1 2 2 2 0 Afadin- and alpha -actinin-Binding Exonuc_VII_L PF02601.15 CCF73557.1 - 0.072 12.6 2.1 0.096 12.2 2.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit APG6_N PF17675.1 CCF73557.1 - 0.3 11.6 5.6 0.55 10.8 5.6 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Fungal_TACC PF12709.7 CCF73557.1 - 0.34 11.4 5.9 0.25 11.8 3.2 2.2 2 0 0 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins Prominin PF05478.11 CCF73557.1 - 0.38 8.6 5.3 0.56 8.1 5.3 1.1 1 0 0 1 1 1 0 Prominin DUF2968 PF11180.8 CCF73557.1 - 0.54 9.9 5.0 2.2 7.9 3.6 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2968) Med4 PF10018.9 CCF73557.1 - 4.7 6.8 8.4 4.1 7.0 6.8 1.6 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 tRNA-synt_1g PF09334.11 CCF73558.1 - 2.6e-89 299.7 0.9 4.7e-50 170.5 0.0 2.3 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 CCF73558.1 - 1.7e-32 112.5 5.2 3.5e-20 71.8 0.1 3.2 1 1 2 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 CCF73558.1 - 1.7e-11 44.1 0.3 1.7e-05 24.3 0.3 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Anticodon_1 PF08264.13 CCF73558.1 - 0.00013 22.0 0.1 0.00051 20.0 0.1 2.0 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1f PF01921.18 CCF73558.1 - 0.00041 19.4 0.1 0.14 11.1 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (K) GST_C_3 PF14497.6 CCF73558.1 - 0.0066 16.6 0.5 0.022 15.0 0.5 1.9 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 CCF73558.1 - 0.0078 16.2 0.0 0.019 15.0 0.0 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GTP_EFTU PF00009.27 CCF73560.1 - 0.03 13.8 0.0 0.056 13.0 0.0 1.4 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 CCF73560.1 - 0.037 14.1 0.0 0.075 13.1 0.0 1.5 1 0 0 1 1 1 0 50S ribosome-binding GTPase DUF4589 PF15252.6 CCF73560.1 - 0.14 12.2 0.0 0.28 11.2 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4589) Evr1_Alr PF04777.13 CCF73561.1 - 4.5e-06 27.1 0.0 5.9e-06 26.7 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family CRAL_TRIO PF00650.20 CCF73562.1 - 3.5e-33 114.6 0.1 8.1e-33 113.4 0.1 1.7 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 CCF73562.1 - 0.0057 16.8 2.3 0.01 16.0 0.3 2.4 2 1 1 3 3 3 1 Divergent CRAL/TRIO domain SNF2_N PF00176.23 CCF73563.1 - 1.9e-46 158.4 2.0 2.8e-46 157.9 0.2 2.3 2 1 1 3 3 3 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF73563.1 - 4.2e-20 72.2 0.2 4.1e-19 69.0 0.0 2.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Bromodomain PF00439.25 CCF73563.1 - 9.6e-13 48.0 9.0 5.2e-12 45.7 0.7 4.0 3 0 0 3 3 3 1 Bromodomain ResIII PF04851.15 CCF73563.1 - 5.7e-08 32.9 0.0 6.7e-07 29.5 0.0 2.9 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DEAD PF00270.29 CCF73563.1 - 3.9e-05 23.5 0.0 0.00013 21.8 0.0 1.9 1 0 0 1 1 1 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 CCF73563.1 - 0.0018 18.0 0.0 0.0056 16.4 0.0 1.8 2 0 0 2 2 2 1 SWI2/SNF2 ATPase HSA PF07529.13 CCF73563.1 - 0.035 14.4 0.9 0.092 13.1 0.9 1.7 1 0 0 1 1 1 0 HSA TFIIS_M PF07500.14 CCF73565.1 - 1.1e-12 48.3 0.2 2.3e-12 47.4 0.2 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain BAH PF01426.18 CCF73565.1 - 0.0012 18.7 0.0 0.0046 16.8 0.0 2.1 2 0 0 2 2 2 1 BAH domain FliS PF02561.14 CCF73565.1 - 0.065 13.5 0.3 0.16 12.2 0.3 1.6 1 0 0 1 1 1 0 Flagellar protein FliS Transket_pyr PF02779.24 CCF73567.1 - 1.2e-51 175.0 0.0 1.8e-51 174.3 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain OxoGdeHyase_C PF16870.5 CCF73567.1 - 1.5e-42 144.8 0.0 3.2e-42 143.8 0.0 1.6 2 0 0 2 2 2 1 2-oxoglutarate dehydrogenase C-terminal E1_dh PF00676.20 CCF73567.1 - 4.1e-42 144.2 0.0 2.7e-41 141.4 0.0 2.0 2 0 0 2 2 2 1 Dehydrogenase E1 component 2-oxogl_dehyd_N PF16078.5 CCF73567.1 - 0.011 15.4 1.0 0.011 15.4 1.0 2.0 2 0 0 2 2 2 0 2-oxoglutarate dehydrogenase N-terminus HK PF02110.15 CCF73567.1 - 0.16 11.4 0.0 0.27 10.6 0.0 1.2 1 0 0 1 1 1 0 Hydroxyethylthiazole kinase family Phage_term_sma PF07141.11 CCF73570.1 - 0.019 14.7 0.3 2.6 7.8 0.0 2.8 3 0 0 3 3 3 0 Putative bacteriophage terminase small subunit STI1 PF17830.1 CCF73571.1 - 0.0013 18.6 0.0 0.0038 17.1 0.0 1.7 1 1 0 1 1 1 1 STI1 domain zf-HIT PF04438.16 CCF73571.1 - 0.027 14.3 8.1 0.048 13.5 8.1 1.4 1 0 0 1 1 1 0 HIT zinc finger WD40 PF00400.32 CCF73572.1 - 0.018 15.9 1.5 0.27 12.2 0.1 3.4 3 0 0 3 3 3 0 WD domain, G-beta repeat Pico_P2A PF00947.19 CCF73572.1 - 0.27 11.2 2.3 5.7 7.0 0.3 3.1 2 1 0 2 2 2 0 Picornavirus core protein 2A NFACT-R_1 PF05670.13 CCF73573.1 - 1.6e-09 38.3 0.1 3.1e-08 34.2 0.1 2.7 1 1 0 1 1 1 1 NFACT protein RNA binding domain FbpA PF05833.11 CCF73573.1 - 4.9e-09 35.5 0.0 1.1e-07 31.0 0.0 2.3 2 0 0 2 2 2 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_2 PF18297.1 CCF73573.1 - 0.00095 19.3 0.0 0.0023 18.1 0.0 1.7 1 0 0 1 1 1 1 NFACT protein RNA binding domain Ribosomal_S13 PF00416.22 CCF73573.1 - 0.12 12.8 0.1 0.95 9.9 0.0 2.6 2 1 1 3 3 3 0 Ribosomal protein S13/S18 Vps53_N PF04100.12 CCF73574.1 - 3.9e-25 88.6 4.3 7.2e-25 87.7 4.3 1.4 1 0 0 1 1 1 1 Vps53-like, N-terminal NIF PF03031.18 CCF73576.1 - 1.8e-32 112.3 0.1 3e-32 111.6 0.1 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase DWNN PF08783.11 CCF73577.1 - 2.5e-07 30.9 0.0 8.9e-07 29.1 0.0 2.0 1 0 0 1 1 1 1 DWNN domain YqbF PF14553.6 CCF73577.1 - 0.0062 16.4 1.7 1.3 9.0 0.4 2.6 2 0 0 2 2 2 2 YqbF, hypothetical protein domain zf-C3HC4_2 PF13923.6 CCF73577.1 - 0.013 15.3 10.4 0.035 13.9 6.0 2.5 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF73577.1 - 0.037 14.1 1.3 0.065 13.3 0.8 1.8 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 CCF73577.1 - 0.063 13.2 7.3 0.18 11.7 7.3 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TPR_8 PF13181.6 CCF73577.1 - 0.16 12.3 0.4 1 9.7 0.2 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat zf-C3HC4_3 PF13920.6 CCF73577.1 - 0.19 11.6 11.8 0.78 9.7 11.8 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 CCF73577.1 - 0.34 11.3 8.5 1.2 9.5 8.5 1.9 1 1 0 1 1 1 0 Ring finger domain zf-C3HC4_4 PF15227.6 CCF73577.1 - 0.51 10.5 5.6 2.2 8.5 5.6 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 CCF73577.1 - 5.7 7.0 8.7 14 5.7 8.7 1.7 1 0 0 1 1 1 0 zinc-RING finger domain SAPIS-gp6 PF16722.5 CCF73578.1 - 2.9 8.4 10.0 1 9.8 0.2 3.6 3 0 0 3 3 3 0 Pathogenicity island protein gp6 in Staphylococcus Neur_chan_memb PF02932.16 CCF73579.1 - 0.013 15.5 0.3 0.027 14.5 0.3 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region ELK PF03789.13 CCF73579.1 - 0.015 15.4 0.7 1.1 9.4 0.3 2.6 2 0 0 2 2 2 0 ELK domain DUF2634 PF10934.8 CCF73579.1 - 0.035 14.2 0.5 3.5 7.8 0.0 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2634) partial_CstF PF15861.5 CCF73579.1 - 0.096 12.5 3.3 0.4 10.5 1.2 3.1 3 0 0 3 3 3 0 Partial cleavage stimulation factor domain POTRA PF07244.15 CCF73580.1 - 0.11 13.0 0.1 5.4 7.7 0.0 2.7 2 1 0 2 2 2 0 Surface antigen variable number repeat CPW_WPC PF09717.10 CCF73581.1 - 3.3e-85 281.0 58.7 6.7e-15 55.8 3.6 10.5 10 0 0 10 10 10 9 Plasmodium falciparum domain of unknown function (CPW_WPC) UL45 PF05473.12 CCF73581.1 - 0.32 10.6 14.7 1.7 8.3 0.4 5.2 5 0 0 5 5 5 0 UL45 protein, carbohydrate-binding C-type lectin-like MMS1_N PF10433.9 CCF73582.1 - 5.6e-137 457.3 0.0 8e-137 456.8 0.0 1.2 1 0 0 1 1 1 1 Mono-functional DNA-alkylating methyl methanesulfonate N-term CPSF_A PF03178.15 CCF73582.1 - 3.4e-74 250.0 0.0 1.3e-71 241.6 0.0 3.4 4 0 0 4 4 4 2 CPSF A subunit region CHCH PF06747.13 CCF73583.1 - 0.00026 21.0 1.1 0.0008 19.5 0.9 1.9 1 1 1 2 2 2 2 CHCH domain Ran_BP1 PF00638.18 CCF73585.1 - 1.2e-39 135.4 0.3 1.5e-39 135.0 0.3 1.1 1 0 0 1 1 1 1 RanBP1 domain Ribosomal_L7Ae PF01248.26 CCF73586.1 - 2e-15 56.3 1.0 3.3e-15 55.6 1.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 CCF73586.1 - 0.044 13.8 0.5 0.064 13.3 0.5 1.3 1 1 0 1 1 1 0 RNase P subunit Pop3 Glutaredoxin PF00462.24 CCF73587.1 - 4.6e-13 49.2 0.0 1.1e-12 48.0 0.0 1.6 1 0 0 1 1 1 1 Glutaredoxin SH3BGR PF04908.15 CCF73587.1 - 0.051 13.7 0.0 0.13 12.4 0.0 1.6 1 0 0 1 1 1 0 SH3-binding, glutamic acid-rich protein AP2 PF00847.20 CCF73588.1 - 8.2e-15 54.8 0.0 1.6e-14 53.8 0.0 1.5 1 0 0 1 1 1 1 AP2 domain AAA_2 PF07724.14 CCF73589.1 - 2.4e-54 184.0 0.2 8.8e-52 175.7 0.0 3.5 4 0 0 4 4 3 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 CCF73589.1 - 2.3e-34 117.4 0.8 2.3e-34 117.4 0.8 2.8 2 0 0 2 2 2 1 AAA lid domain ClpB_D2-small PF10431.9 CCF73589.1 - 4.7e-26 90.7 2.1 1.3e-25 89.2 0.1 3.0 3 0 0 3 3 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 CCF73589.1 - 2e-23 83.2 0.0 6.4e-12 46.0 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Clp_N PF02861.20 CCF73589.1 - 2.3e-18 66.0 0.1 1e-10 41.5 0.0 2.7 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component AAA_5 PF07728.14 CCF73589.1 - 6e-15 55.5 0.0 1.7e-10 41.1 0.0 3.3 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF73589.1 - 5.8e-10 39.8 0.4 4.1e-05 24.0 0.1 3.6 3 1 0 3 3 2 2 AAA ATPase domain Sigma54_activat PF00158.26 CCF73589.1 - 1.1e-08 34.9 0.0 0.00018 21.3 0.0 2.4 2 0 0 2 2 2 2 Sigma-54 interaction domain AAA_14 PF13173.6 CCF73589.1 - 7.3e-08 32.5 0.0 0.021 14.8 0.0 3.3 3 0 0 3 3 3 2 AAA domain AAA_22 PF13401.6 CCF73589.1 - 6.1e-07 29.8 1.5 0.023 14.9 0.0 4.0 3 2 0 3 3 3 2 AAA domain AAA_18 PF13238.6 CCF73589.1 - 9.6e-07 29.4 0.0 0.013 16.0 0.0 3.7 3 0 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 CCF73589.1 - 6.3e-06 26.0 0.0 0.036 13.8 0.0 2.8 2 0 0 2 2 2 2 IstB-like ATP binding protein ATPase_2 PF01637.18 CCF73589.1 - 7.8e-06 26.0 3.6 0.34 10.8 0.2 4.7 3 2 0 3 3 3 2 ATPase domain predominantly from Archaea TniB PF05621.11 CCF73589.1 - 1.1e-05 24.9 0.2 0.0055 16.1 0.1 3.6 2 2 1 3 3 3 1 Bacterial TniB protein Roc PF08477.13 CCF73589.1 - 5.7e-05 23.3 0.0 0.2 11.9 0.0 2.7 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_7 PF12775.7 CCF73589.1 - 7e-05 22.4 0.0 0.033 13.7 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region RNA_helicase PF00910.22 CCF73589.1 - 9.3e-05 22.8 0.0 0.2 12.0 0.0 3.4 3 0 0 3 3 3 1 RNA helicase RuvB_N PF05496.12 CCF73589.1 - 0.0002 21.1 0.1 5.9 6.6 0.0 4.0 4 0 0 4 4 4 0 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 CCF73589.1 - 0.00034 20.6 0.0 0.11 12.5 0.0 2.7 2 0 0 2 2 2 1 NACHT domain ABC_tran PF00005.27 CCF73589.1 - 0.00067 20.2 1.9 0.079 13.5 0.0 3.9 4 2 0 4 4 3 1 ABC transporter AAA_28 PF13521.6 CCF73589.1 - 0.00069 19.9 0.2 1.2 9.3 0.0 3.8 4 1 0 4 4 3 1 AAA domain RsgA_GTPase PF03193.16 CCF73589.1 - 0.001 19.0 0.0 1.9 8.4 0.0 3.1 3 0 0 3 3 2 1 RsgA GTPase TsaE PF02367.17 CCF73589.1 - 0.0015 18.5 0.0 2.3 8.3 0.0 2.8 3 0 0 3 3 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 CCF73589.1 - 0.0024 17.3 0.0 6.9 6.0 0.0 3.5 2 1 0 3 3 3 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 CCF73589.1 - 0.0038 17.0 0.0 0.52 10.0 0.0 2.6 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 CCF73589.1 - 0.0073 15.6 0.0 0.7 9.1 0.0 3.0 2 0 0 2 2 2 1 Zeta toxin AAA_3 PF07726.11 CCF73589.1 - 0.022 14.6 0.0 4.6 7.1 0.0 3.1 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) betaPIX_CC PF16523.5 CCF73589.1 - 0.028 14.3 1.3 0.13 12.1 1.3 2.1 1 0 0 1 1 1 0 betaPIX coiled coil NTPase_1 PF03266.15 CCF73589.1 - 0.033 14.1 0.4 7.2 6.5 0.0 3.2 4 0 0 4 4 2 0 NTPase CorA PF01544.18 CCF73589.1 - 0.034 13.5 1.5 0.097 12.0 1.5 1.7 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein PduV-EutP PF10662.9 CCF73589.1 - 0.038 13.7 0.0 0.19 11.5 0.0 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_33 PF13671.6 CCF73589.1 - 0.04 14.1 0.0 2.6 8.2 0.0 2.9 3 0 0 3 3 2 0 AAA domain ResIII PF04851.15 CCF73589.1 - 0.051 13.6 0.0 2.8 7.9 0.0 3.2 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit DNA_pol3_delta2 PF13177.6 CCF73589.1 - 0.074 12.8 0.0 1.9 8.2 0.0 2.7 2 0 0 2 2 2 0 DNA polymerase III, delta subunit AAA_29 PF13555.6 CCF73589.1 - 0.08 12.7 0.1 21 4.9 0.0 2.8 3 0 0 3 3 2 0 P-loop containing region of AAA domain DUF4806 PF16064.5 CCF73589.1 - 0.088 13.1 0.1 0.66 10.3 0.0 2.6 3 0 0 3 3 1 0 Domain of unknown function (DUF4806) AAA_17 PF13207.6 CCF73589.1 - 0.088 13.2 0.1 2.9 8.3 0.0 3.2 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 CCF73589.1 - 0.096 12.3 0.0 1.1 8.8 0.0 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_6 PF12774.7 CCF73589.1 - 0.11 11.5 0.0 0.31 10.0 0.0 1.8 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region AAA_19 PF13245.6 CCF73589.1 - 0.12 12.7 0.1 5.6 7.3 0.1 3.0 2 1 0 2 2 2 0 AAA domain DUF87 PF01935.17 CCF73589.1 - 0.21 11.7 5.1 2.9 7.9 0.0 4.0 3 1 1 4 4 4 0 Helicase HerA, central domain AAA_23 PF13476.6 CCF73589.1 - 5.5 7.4 16.1 32 4.9 0.0 4.4 2 1 1 3 3 2 0 AAA domain Peptidase_C48 PF02902.19 CCF73590.1 - 5.6e-37 127.7 0.2 1.1e-36 126.8 0.2 1.4 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Sedlin_N PF04628.13 CCF73592.1 - 8.8e-13 48.5 0.0 1.6e-12 47.7 0.0 1.4 1 1 0 1 1 1 1 Sedlin, N-terminal conserved region Rad51 PF08423.11 CCF73593.1 - 3.6e-112 373.8 0.0 4.7e-112 373.4 0.0 1.1 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 CCF73593.1 - 9.7e-10 38.3 0.1 1.5e-09 37.7 0.1 1.3 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 CCF73593.1 - 8.2e-07 28.8 0.0 1.2e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain HHH_5 PF14520.6 CCF73593.1 - 0.0018 18.9 0.1 0.0043 17.6 0.1 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA PF00004.29 CCF73593.1 - 0.0022 18.4 0.0 0.006 17.0 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 CCF73593.1 - 0.025 13.9 2.3 0.03 13.7 0.7 2.0 2 1 0 2 2 2 0 KaiC AAA_24 PF13479.6 CCF73593.1 - 0.033 13.9 0.0 0.082 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain PCMT PF01135.19 CCF73593.1 - 0.057 13.2 0.1 0.088 12.5 0.1 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) HSP20 PF00011.21 CCF73595.1 - 1.4e-13 50.9 0.0 3.1e-13 49.8 0.0 1.6 2 0 0 2 2 2 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 CCF73595.1 - 8.8e-05 22.0 0.1 0.0019 17.7 0.1 2.6 2 1 0 2 2 2 1 HSP20-like domain found in ArsA CLP_protease PF00574.23 CCF73597.1 - 3.4e-65 219.3 0.1 4.3e-65 219.0 0.1 1.1 1 0 0 1 1 1 1 Clp protease Fra10Ac1 PF09725.9 CCF73598.1 - 3.6e-37 127.2 0.3 5.3e-37 126.7 0.3 1.2 1 0 0 1 1 1 1 Folate-sensitive fragile site protein Fra10Ac1 DUF3161 PF11362.8 CCF73598.1 - 3.6e-11 42.9 0.0 7.1e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3161) AT_hook PF02178.19 CCF73600.1 - 0.055 13.4 4.7 0.15 12.0 4.7 1.8 1 0 0 1 1 1 0 AT hook motif UPF0449 PF15136.6 CCF73601.1 - 0.4 11.2 2.5 0.73 10.3 0.3 2.4 2 0 0 2 2 2 0 Uncharacterised protein family UPF0449 CS PF04969.16 CCF73602.1 - 1.7e-05 25.7 0.4 8.2e-05 23.6 0.0 2.4 1 1 1 2 2 2 1 CS domain DUF3908 PF13048.6 CCF73602.1 - 4.5e-05 23.7 0.1 9.1e-05 22.7 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3908) partial_CstF PF15861.5 CCF73602.1 - 0.035 13.9 4.2 3.6 7.4 0.4 2.6 2 0 0 2 2 2 0 Partial cleavage stimulation factor domain BOP1NT PF08145.12 CCF73602.1 - 0.07 13.0 0.9 0.13 12.2 0.9 1.4 1 0 0 1 1 1 0 BOP1NT (NUC169) domain Adipokin_hormo PF06377.11 CCF73604.1 - 0.2 12.0 0.2 15 6.0 0.1 2.9 3 0 0 3 3 3 0 Adipokinetic hormone VirArc_Nuclease PF12187.8 CCF73605.1 - 0.048 13.2 0.0 0.054 13.0 0.0 1.2 1 0 0 1 1 1 0 Viral/Archaeal nuclease DpnI_C PF17726.1 CCF73605.1 - 0.076 13.1 1.0 0.32 11.2 0.3 2.2 2 1 0 2 2 2 0 Dam-replacing HTH domain CS PF04969.16 CCF73607.1 - 3.3e-14 53.7 0.3 5.1e-14 53.0 0.1 1.4 2 0 0 2 2 2 1 CS domain DUF1878 PF08963.10 CCF73607.1 - 0.08 13.4 0.1 0.12 12.9 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1878) DUF3449 PF11931.8 CCF73609.1 - 3.9e-74 248.4 1.8 4.3e-74 248.3 0.2 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 CCF73609.1 - 7.1e-19 68.1 2.0 7.1e-19 68.1 2.0 3.0 2 1 1 3 3 3 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 SF3a60_bindingd PF12108.8 CCF73609.1 - 6.8e-08 32.2 0.6 6.8e-08 32.2 0.6 2.4 2 0 0 2 2 2 1 Splicing factor SF3a60 binding domain SBDS PF01172.18 CCF73609.1 - 0.0078 16.3 0.7 0.02 14.9 0.7 1.7 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein Desulfoferrod_N PF06397.12 CCF73609.1 - 0.29 10.8 1.8 0.59 9.8 1.8 1.4 1 0 0 1 1 1 0 Desulfoferrodoxin, N-terminal domain Fumerase PF05681.14 CCF73610.1 - 1.2e-79 267.5 0.0 1.6e-79 267.2 0.0 1.1 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) Fumerase_C PF05683.12 CCF73610.1 - 4.8e-79 264.5 0.0 1.2e-78 263.2 0.0 1.6 2 0 0 2 2 2 1 Fumarase C-terminus FANCI_HD1 PF14679.6 CCF73612.1 - 0.015 15.2 1.8 4.9 7.2 0.1 2.9 2 1 0 2 2 2 0 FANCI helical domain 1 Shal-type PF11601.8 CCF73612.1 - 0.06 12.9 0.4 0.13 11.8 0.4 1.5 1 0 0 1 1 1 0 Shal-type voltage-gated potassium channels, N-terminal FAST_1 PF06743.15 CCF73612.1 - 0.1 12.6 0.1 35 4.4 0.0 3.7 4 0 0 4 4 4 0 FAST kinase-like protein, subdomain 1 G-patch_2 PF12656.7 CCF73613.1 - 7e-14 51.7 0.0 1.6e-13 50.5 0.0 1.6 1 0 0 1 1 1 1 G-patch domain KN17_SH3 PF18131.1 CCF73613.1 - 0.00016 21.8 2.7 0.00016 21.8 2.7 1.9 2 0 0 2 2 2 1 KN17 SH3-like C-terminal domain GCS PF03074.16 CCF73614.1 - 3.7e-110 368.7 0.0 5.4e-110 368.2 0.0 1.2 1 0 0 1 1 1 1 Glutamate-cysteine ligase GCS2 PF04107.13 CCF73614.1 - 0.024 14.0 0.0 0.042 13.2 0.0 1.3 1 0 0 1 1 1 0 Glutamate-cysteine ligase family 2(GCS2) 2OG-FeII_Oxy_2 PF13532.6 CCF73615.1 - 2.4e-18 67.0 0.0 2.7e-18 66.9 0.0 1.1 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily T6SS_TssF PF05947.12 CCF73615.1 - 0.056 12.0 0.0 0.072 11.6 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssF Dus PF01207.17 CCF73617.1 - 2e-49 168.4 0.0 8.4e-49 166.3 0.0 1.9 1 1 0 1 1 1 1 Dihydrouridine synthase (Dus) DUF3402 PF11882.8 CCF73617.1 - 0.0097 15.1 0.2 0.02 14.0 0.1 1.5 2 0 0 2 2 2 1 Domain of unknown function (DUF3402) RNA_pol_A_bac PF01000.26 CCF73618.1 - 2.5e-23 82.6 0.0 5.2e-23 81.5 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 CCF73618.1 - 2.1e-19 68.7 0.0 3.1e-19 68.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L_2 PF13656.6 CCF73618.1 - 0.0068 16.2 0.1 0.38 10.6 0.0 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_9 PF13187.6 CCF73618.1 - 0.021 15.0 0.5 0.021 15.0 0.5 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain STIL_N PF15253.6 CCF73618.1 - 0.051 12.5 0.1 0.093 11.7 0.1 1.3 1 0 0 1 1 1 0 SCL-interrupting locus protein N-terminus PAPS_reduct PF01507.19 CCF73619.1 - 2e-19 70.3 0.0 5.6e-16 59.1 0.0 2.4 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family DUF572 PF04502.13 CCF73620.1 - 1.5e-47 162.8 9.3 2e-47 162.5 9.3 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) zf-ribbon_3 PF13248.6 CCF73620.1 - 0.18 11.3 0.9 4.5 6.8 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain DUF4484 PF14831.6 CCF73620.1 - 4.1 7.4 9.5 5.7 6.9 9.5 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4484) tRNA-synt_1e PF01406.19 CCF73621.1 - 2.2e-121 404.9 1.7 2.5e-121 404.7 0.3 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 CCF73621.1 - 1.2e-08 34.1 0.4 0.00056 18.8 0.1 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1f PF01921.18 CCF73621.1 - 1.6e-05 24.0 0.2 0.091 11.7 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (K) tRNA-synt_1 PF00133.22 CCF73621.1 - 0.00016 20.1 0.4 0.0044 15.3 0.0 2.4 2 1 0 2 2 2 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1d PF00750.19 CCF73621.1 - 0.0018 17.3 0.1 0.0041 16.1 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetases class I (R) CSF-1 PF05337.11 CCF73621.1 - 0.13 12.3 0.5 0.31 11.2 0.0 1.9 2 0 0 2 2 2 0 Macrophage colony stimulating factor-1 (CSF-1) RAP PF08373.10 CCF73622.1 - 0.002 18.2 0.1 0.006 16.6 0.1 1.9 1 0 0 1 1 1 1 RAP domain FAST_1 PF06743.15 CCF73622.1 - 0.1 12.6 0.6 1.2 9.1 0.2 3.1 1 1 2 3 3 3 0 FAST kinase-like protein, subdomain 1 Alba PF01918.21 CCF73624.1 - 2.5e-06 27.2 0.1 3.6e-06 26.7 0.1 1.2 1 0 0 1 1 1 1 Alba DUF5070 PF16802.5 CCF73624.1 - 0.048 13.7 0.0 0.065 13.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5070) DUF3244 PF11589.8 CCF73624.1 - 0.12 12.5 0.1 0.26 11.4 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3244) LRRC37AB_C PF14914.6 CCF73625.1 - 0.17 11.8 0.1 0.17 11.8 0.1 1.2 1 0 0 1 1 1 0 LRRC37A/B like protein 1 C-terminal domain NOT2_3_5 PF04153.18 CCF73626.1 - 6.3e-32 110.4 3.9 1.7e-31 109.0 3.9 1.7 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family Not3 PF04065.15 CCF73626.1 - 3e-13 49.7 6.9 5e-13 49.0 6.9 1.3 1 0 0 1 1 1 1 Not1 N-terminal domain, CCR4-Not complex component TPX2_importin PF12214.8 CCF73626.1 - 0.046 13.9 0.0 0.075 13.2 0.0 1.3 1 0 0 1 1 1 0 Cell cycle regulated microtubule associated protein IMP2_N PF18590.1 CCF73627.1 - 1.1e-20 74.0 0.1 1.7e-20 73.3 0.1 1.3 1 0 0 1 1 1 1 Immune Mapped Protein 2 (IMP2) N-terminal domain SpoVS PF04232.12 CCF73627.1 - 0.14 11.9 0.2 0.33 10.7 0.2 1.5 1 0 0 1 1 1 0 Stage V sporulation protein S (SpoVS) 4HBT PF03061.22 CCF73629.1 - 0.0011 19.2 0.0 0.002 18.5 0.0 1.4 1 0 0 1 1 1 1 Thioesterase superfamily JAB PF01398.21 CCF73630.1 - 1.7e-14 53.8 0.1 4e-14 52.6 0.1 1.6 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 CCF73630.1 - 1e-06 29.1 0.3 1.7e-06 28.4 0.3 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function BRCT PF00533.26 CCF73631.1 - 0.029 14.8 0.1 4.2 7.8 0.0 2.5 2 0 0 2 2 2 0 BRCA1 C Terminus (BRCT) domain Globin PF00042.22 CCF73632.1 - 0.025 15.1 0.1 0.36 11.4 0.0 2.4 2 0 0 2 2 2 0 Globin ATP-synt_ab PF00006.25 CCF73633.1 - 1.2e-62 211.4 0.0 1.6e-62 211.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 CCF73633.1 - 4.7e-11 43.1 1.1 8.4e-11 42.2 1.1 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain Tropomyosin_1 PF12718.7 CCF73634.1 - 0.035 14.3 57.7 0.097 12.8 8.2 5.2 3 1 2 5 5 5 0 Tropomyosin like TolA_bind_tri PF16331.5 CCF73634.1 - 0.33 11.1 36.4 0.83 9.8 2.7 6.1 5 1 0 5 5 5 0 TolA binding protein trimerisation DUF4279 PF14106.6 CCF73634.1 - 0.35 11.1 4.1 0.83 9.9 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4279) MRFAP1 PF15155.6 CCF73634.1 - 0.43 11.1 19.8 0.48 11.0 5.2 3.7 3 1 0 3 3 3 0 MORF4 family-associated protein1 PCI PF01399.27 CCF73635.1 - 3.5e-16 59.6 0.6 1.1e-14 54.8 0.0 2.7 2 1 0 2 2 2 1 PCI domain Rpn3_C PF08375.11 CCF73635.1 - 2.2e-10 40.8 0.0 4.6e-10 39.8 0.0 1.6 1 0 0 1 1 1 1 Proteasome regulatory subunit C-terminal DivIC PF04977.15 CCF73636.1 - 0.012 15.3 0.0 0.012 15.3 0.0 5.6 5 2 1 6 6 6 0 Septum formation initiator COMP PF11598.8 CCF73636.1 - 0.024 15.1 7.3 0.15 12.6 0.6 2.8 2 0 0 2 2 2 0 Cartilage oligomeric matrix protein PMC2NT PF08066.12 CCF73636.1 - 0.12 13.1 3.0 0.24 12.1 1.7 2.2 1 1 1 2 2 2 0 PMC2NT (NUC016) domain NPV_P10 PF05531.12 CCF73636.1 - 0.12 12.9 1.0 0.52 10.8 0.3 2.5 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein CC2-LZ PF16516.5 CCF73636.1 - 4.3 7.8 17.0 4.9 7.6 1.2 4.4 3 2 0 3 3 3 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator DUF641 PF04859.12 CCF73636.1 - 5.4 7.4 11.7 53 4.2 8.4 3.4 2 1 0 2 2 2 0 Plant protein of unknown function (DUF641) vATP-synt_AC39 PF01992.16 CCF73637.1 - 1.1e-80 271.7 0.6 1.3e-80 271.4 0.6 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit YL1 PF05764.13 CCF73639.1 - 2.5e-23 83.5 23.4 2.5e-23 83.5 23.4 2.2 2 0 0 2 2 2 1 YL1 nuclear protein YL1_C PF08265.11 CCF73639.1 - 1.7e-07 30.8 0.0 3.3e-07 29.9 0.0 1.5 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain ASL_C PF08328.11 CCF73640.1 - 0.13 12.4 0.1 0.41 10.7 0.1 1.8 2 0 0 2 2 2 0 Adenylosuccinate lyase C-terminal DUF3811 PF11656.8 CCF73642.1 - 0.017 15.5 1.2 0.074 13.5 1.2 2.1 1 0 0 1 1 1 0 YjbD family (DUF3811) DUF374 PF04028.13 CCF73642.1 - 0.036 13.6 0.0 0.17 11.5 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF374) Translat_reg PF01818.17 CCF73642.1 - 0.061 13.3 0.5 0.16 12.0 0.5 1.8 1 0 0 1 1 1 0 Bacteriophage translational regulator BST2 PF16716.5 CCF73642.1 - 4.9 7.8 14.5 0.89 10.2 3.9 3.6 3 1 1 4 4 4 0 Bone marrow stromal antigen 2 Atg14 PF10186.9 CCF73642.1 - 6.7 5.7 21.3 0.25 10.4 12.5 2.4 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 CBF PF03914.17 CCF73643.1 - 0.00098 19.2 1.6 1.1 9.2 0.0 2.9 1 1 1 2 2 2 2 CBF/Mak21 family UPF0113_N PF17833.1 CCF73644.1 - 1.8e-27 95.7 0.4 2.8e-27 95.1 0.4 1.3 1 0 0 1 1 1 1 UPF0113 Pre-PUA domain UPF0113 PF03657.13 CCF73644.1 - 5.2e-20 71.5 0.0 1.3e-19 70.3 0.0 1.6 2 0 0 2 2 2 1 UPF0113 PUA domain AP2 PF00847.20 CCF73647.1 - 2.3e-10 40.5 0.2 3.9e-10 39.8 0.2 1.4 1 0 0 1 1 1 1 AP2 domain RPN2_C PF18004.1 CCF73648.1 - 6.7e-19 68.4 0.0 1.1e-18 67.7 0.0 1.3 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain HEAT_2 PF13646.6 CCF73648.1 - 5.3e-16 58.8 0.0 2.3e-12 47.1 0.0 3.6 3 0 0 3 3 3 2 HEAT repeats PC_rep PF01851.22 CCF73648.1 - 6.4e-16 57.9 23.4 0.00044 20.5 0.3 8.5 8 0 0 8 8 8 4 Proteasome/cyclosome repeat Cnd1 PF12717.7 CCF73648.1 - 2.6e-06 27.5 0.2 0.09 12.8 0.1 3.6 2 1 1 3 3 3 2 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 CCF73648.1 - 6.5e-05 22.9 0.2 8.3 7.0 0.1 4.8 4 0 0 4 4 4 1 HEAT repeat HEAT_EZ PF13513.6 CCF73648.1 - 0.041 14.4 0.3 0.97 10.0 0.1 3.1 1 1 2 3 3 3 0 HEAT-like repeat Cauli_DNA-bind PF03310.13 CCF73648.1 - 0.17 12.0 3.6 0.12 12.4 0.2 2.3 2 0 0 2 2 2 0 Caulimovirus DNA-binding protein Kelch_5 PF13854.6 CCF73649.1 - 1.7e-34 117.2 5.8 9.3e-06 25.5 0.0 6.7 6 0 0 6 6 6 6 Kelch motif Metallophos PF00149.28 CCF73649.1 - 1.9e-32 113.4 0.4 3.7e-32 112.5 0.4 1.5 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Kelch_4 PF13418.6 CCF73649.1 - 1e-30 105.4 10.1 5.8e-10 39.0 0.3 7.3 7 0 0 7 7 7 6 Galactose oxidase, central domain Kelch_2 PF07646.15 CCF73649.1 - 1e-20 72.8 7.8 0.00084 19.2 0.1 6.9 6 0 0 6 6 6 5 Kelch motif Kelch_3 PF13415.6 CCF73649.1 - 2.3e-20 72.4 6.6 7e-05 23.0 0.1 7.6 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_6 PF13964.6 CCF73649.1 - 3.4e-16 58.9 7.5 0.014 15.7 0.1 6.6 6 0 0 6 6 6 5 Kelch motif Kelch_1 PF01344.25 CCF73649.1 - 9.8e-14 50.7 13.4 0.0041 16.7 0.0 7.3 7 1 0 7 7 7 5 Kelch motif RAG2 PF03089.14 CCF73649.1 - 3.5e-06 26.2 0.5 0.24 10.4 0.0 4.7 4 1 1 5 5 5 1 Recombination activating protein 2 CDC73_N PF16050.5 CCF73650.1 - 0.19 11.0 0.1 0.28 10.5 0.1 1.2 1 0 0 1 1 1 0 Paf1 complex subunit CDC73 N-terminal Ribosomal_S3_C PF00189.20 CCF73651.1 - 4.2e-24 84.9 0.7 1.3e-23 83.3 0.8 1.8 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 CCF73651.1 - 3.5e-10 39.6 0.0 6.2e-10 38.8 0.0 1.5 1 0 0 1 1 1 1 KH domain BK_channel_a PF03493.18 CCF73654.1 - 3.4e-10 40.0 0.0 1e-09 38.5 0.0 1.8 1 0 0 1 1 1 1 Calcium-activated BK potassium channel alpha subunit Ion_trans_2 PF07885.16 CCF73654.1 - 1.1e-06 28.5 0.3 1.1e-06 28.5 0.3 2.6 2 0 0 2 2 2 1 Ion channel Castor_Poll_mid PF06241.12 CCF73654.1 - 0.0098 15.8 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 1 Castor and Pollux, part of voltage-gated ion channel Lactamase_B_2 PF12706.7 CCF73656.1 - 1.1e-21 77.3 0.1 5.2e-20 71.8 0.5 2.2 2 0 0 2 2 2 1 Beta-lactamase superfamily domain Lactamase_B_4 PF13691.6 CCF73656.1 - 6e-06 25.8 0.1 3.2e-05 23.5 0.0 2.3 2 0 0 2 2 2 1 tRNase Z endonuclease Lactamase_B PF00753.27 CCF73656.1 - 0.00087 19.3 0.1 0.0018 18.3 0.1 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily DMP12 PF16779.5 CCF73657.1 - 0.0044 17.0 0.2 0.014 15.3 0.1 1.9 2 0 0 2 2 2 1 DNA-mimic protein LPD11 PF18824.1 CCF73657.1 - 0.076 13.1 0.0 2.9 8.0 0.0 2.6 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 11 UQ_con PF00179.26 CCF73658.1 - 4.9e-24 84.6 0.0 6.3e-24 84.2 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 CCF73658.1 - 9.6e-06 25.3 0.0 1.2e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 CCF73658.1 - 0.00023 21.0 0.0 0.00034 20.5 0.0 1.3 1 0 0 1 1 1 1 UEV domain RWD PF05773.22 CCF73658.1 - 0.017 15.4 0.0 0.019 15.3 0.0 1.3 1 0 0 1 1 1 0 RWD domain JmjC PF02373.22 CCF73659.1 - 1.6e-37 128.4 0.1 3.5e-37 127.3 0.1 1.6 1 0 0 1 1 1 1 JmjC domain, hydroxylase JmjN PF02375.17 CCF73659.1 - 1.7e-07 31.0 0.1 4.1e-07 29.9 0.1 1.7 1 0 0 1 1 1 1 jmjN domain zf-C5HC2 PF02928.16 CCF73659.1 - 0.00011 22.5 11.8 0.00015 22.0 10.6 1.9 2 0 0 2 2 2 1 C5HC2 zinc finger Sod_Fe_C PF02777.18 CCF73661.1 - 2.9e-37 126.9 0.4 2.9e-37 126.9 0.4 1.9 2 1 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 CCF73661.1 - 6e-31 106.8 1.0 6e-31 106.8 1.0 1.8 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain RAP PF08373.10 CCF73662.1 - 6.1e-12 45.5 1.4 8.1e-12 45.1 0.1 1.9 2 0 0 2 2 2 1 RAP domain Pribosyltran PF00156.27 CCF73663.1 - 7.2e-08 32.1 0.1 9.6e-08 31.7 0.1 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain HEAT PF02985.22 CCF73665.1 - 1.6e-10 40.3 8.1 0.014 15.6 0.0 7.0 7 0 0 7 7 7 3 HEAT repeat HEAT_EZ PF13513.6 CCF73665.1 - 3.8e-09 36.9 6.6 9.8e-07 29.2 0.0 5.9 8 0 0 8 8 8 1 HEAT-like repeat IBN_N PF03810.19 CCF73665.1 - 7e-07 29.1 0.3 7.9e-06 25.7 0.1 2.8 2 0 0 2 2 2 1 Importin-beta N-terminal domain HEAT_2 PF13646.6 CCF73665.1 - 3e-05 24.3 0.1 0.13 12.7 0.0 4.0 3 1 0 3 3 3 2 HEAT repeats Arm PF00514.23 CCF73665.1 - 0.031 14.3 1.6 0.096 12.8 0.0 2.8 3 0 0 3 3 3 0 Armadillo/beta-catenin-like repeat Fis1_TPR_N PF14852.6 CCF73667.1 - 2.2e-09 36.8 0.0 4.2e-09 35.9 0.0 1.4 1 0 0 1 1 1 1 Fis1 N-terminal tetratricopeptide repeat Fis1_TPR_C PF14853.6 CCF73667.1 - 0.02 15.0 0.1 0.051 13.7 0.0 1.8 2 0 0 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat DnaJ_C PF01556.18 CCF73668.1 - 1.3e-25 90.2 0.1 2e-25 89.6 0.1 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CCF73668.1 - 5e-11 42.6 1.0 1.1e-10 41.5 1.0 1.6 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 CCF73668.1 - 0.00098 19.4 12.6 0.002 18.5 12.6 1.5 1 0 0 1 1 1 1 DnaJ central domain OrfB_Zn_ribbon PF07282.11 CCF73668.1 - 0.063 13.2 1.4 0.17 11.8 1.4 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Anti-TRAP PF15777.5 CCF73668.1 - 1.4 9.0 6.5 24 5.0 4.3 2.4 1 1 1 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein Rad51 PF08423.11 CCF73669.1 - 0.0021 17.4 0.1 0.0029 16.9 0.1 1.1 1 0 0 1 1 1 1 Rad51 DNA_pol_E_B PF04042.16 CCF73672.1 - 1.1e-23 83.7 0.6 1.6e-23 83.2 0.6 1.2 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B DUF2439 PF10382.9 CCF73673.1 - 0.00015 22.0 3.1 0.0011 19.3 1.5 2.8 2 1 0 2 2 2 1 Protein of unknown function (DUF2439) Tsc35 PF15079.6 CCF73673.1 - 0.0037 16.9 1.5 0.08 12.5 0.2 2.3 2 0 0 2 2 2 2 Testis-specific protein 35 DDHD PF02862.17 CCF73675.1 - 5.3e-34 118.3 0.3 8e-34 117.7 0.3 1.3 1 0 0 1 1 1 1 DDHD domain Abhydrolase_1 PF00561.20 CCF73675.1 - 0.077 12.6 0.1 0.23 11.0 0.0 1.8 2 0 0 2 2 2 0 alpha/beta hydrolase fold Cutinase PF01083.22 CCF73675.1 - 0.2 11.6 0.0 0.38 10.7 0.0 1.4 1 0 0 1 1 1 0 Cutinase AAA PF00004.29 CCF73676.1 - 8.6e-81 268.9 0.0 6.2e-42 143.1 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF73676.1 - 9.4e-18 63.8 0.0 3.8e-08 33.0 0.0 2.7 2 0 0 2 2 2 2 AAA+ lid domain AAA_5 PF07728.14 CCF73676.1 - 5.7e-15 55.5 0.1 3.9e-06 26.9 0.0 3.8 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 CCF73676.1 - 3e-14 53.5 0.0 7.1e-08 32.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 CCF73676.1 - 3.9e-14 53.4 0.4 0.00027 21.4 0.1 4.4 2 2 1 3 3 3 2 AAA ATPase domain RuvB_N PF05496.12 CCF73676.1 - 2.7e-11 43.5 0.0 0.00017 21.4 0.0 2.9 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 CCF73676.1 - 7.5e-09 36.2 0.0 0.0056 17.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 CCF73676.1 - 1e-08 35.6 0.3 0.012 15.8 0.0 3.9 2 2 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 CCF73676.1 - 1.7e-08 34.4 0.0 0.0066 16.2 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein ABC_tran PF00005.27 CCF73676.1 - 2.2e-08 34.7 0.0 0.0033 17.9 0.0 2.5 2 0 0 2 2 2 2 ABC transporter Sigma54_activat PF00158.26 CCF73676.1 - 2.9e-08 33.6 0.1 0.14 11.8 0.0 3.8 3 1 0 3 3 3 3 Sigma-54 interaction domain AAA_33 PF13671.6 CCF73676.1 - 3.1e-08 33.9 0.0 0.0017 18.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 CCF73676.1 - 8.6e-08 31.8 1.1 0.0076 15.7 0.0 2.6 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 CCF73676.1 - 2e-07 30.6 0.1 0.0087 15.3 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain RNA_helicase PF00910.22 CCF73676.1 - 2e-07 31.4 0.0 0.0091 16.4 0.0 2.6 2 0 0 2 2 2 2 RNA helicase AAA_14 PF13173.6 CCF73676.1 - 9.5e-07 28.9 0.0 0.0033 17.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 CCF73676.1 - 3e-06 27.2 0.0 0.086 12.7 0.0 2.8 2 0 0 2 2 2 2 NACHT domain Zeta_toxin PF06414.12 CCF73676.1 - 5.4e-06 25.8 0.1 0.053 12.8 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin DUF815 PF05673.13 CCF73676.1 - 5.8e-06 25.6 0.0 0.0098 15.1 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_28 PF13521.6 CCF73676.1 - 9.3e-06 26.0 0.0 0.17 12.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_17 PF13207.6 CCF73676.1 - 3.3e-05 24.3 0.1 0.35 11.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 CCF73676.1 - 5.8e-05 23.0 0.1 0.0043 17.0 0.0 2.9 3 0 0 3 3 2 1 Vps4 C terminal oligomerisation domain Parvo_NS1 PF01057.17 CCF73676.1 - 7.1e-05 22.0 0.1 0.22 10.6 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_7 PF12775.7 CCF73676.1 - 7.3e-05 22.4 0.0 0.25 10.8 0.0 2.7 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_3 PF07726.11 CCF73676.1 - 0.00011 22.1 0.0 0.38 10.6 0.0 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 CCF73676.1 - 0.00013 21.4 0.3 0.7 9.2 0.0 3.1 3 0 0 3 3 3 2 KaiC AAA_24 PF13479.6 CCF73676.1 - 0.00016 21.4 0.0 0.15 11.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 CCF73676.1 - 0.00017 21.6 0.0 0.17 11.9 0.0 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATPase_2 PF01637.18 CCF73676.1 - 0.00028 20.9 0.1 0.16 11.9 0.0 3.4 2 2 2 4 4 4 1 ATPase domain predominantly from Archaea NB-ARC PF00931.22 CCF73676.1 - 0.00032 20.0 0.0 0.28 10.3 0.0 2.5 2 0 0 2 2 2 1 NB-ARC domain AAA_25 PF13481.6 CCF73676.1 - 0.00038 20.1 0.3 0.63 9.6 0.0 3.4 3 1 1 4 4 3 1 AAA domain CPT PF07931.12 CCF73676.1 - 0.00076 19.4 0.0 0.16 11.8 0.0 2.3 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein AAA_29 PF13555.6 CCF73676.1 - 0.0027 17.4 0.1 0.16 11.7 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 CCF73676.1 - 0.0031 17.3 0.0 2.5 7.8 0.0 2.3 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase Rad17 PF03215.15 CCF73676.1 - 0.0032 17.4 0.2 0.88 9.5 0.1 3.0 2 1 1 3 3 3 1 Rad17 P-loop domain NTPase_1 PF03266.15 CCF73676.1 - 0.0042 17.0 0.0 4 7.3 0.0 2.8 2 0 0 2 2 2 0 NTPase Cytidylate_kin PF02224.18 CCF73676.1 - 0.0063 16.3 0.1 2.5 7.8 0.0 2.3 2 0 0 2 2 2 1 Cytidylate kinase Sigma54_activ_2 PF14532.6 CCF73676.1 - 0.0077 16.4 0.0 5.3 7.2 0.0 2.6 2 1 0 2 2 2 0 Sigma-54 interaction domain Hydin_ADK PF17213.3 CCF73676.1 - 0.0098 16.2 0.0 4.2 7.6 0.0 2.4 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain AAA_11 PF13086.6 CCF73676.1 - 0.01 15.7 0.0 2.9 7.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 CCF73676.1 - 0.018 14.5 0.3 3.9 6.8 0.0 3.3 3 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_19 PF13245.6 CCF73676.1 - 0.021 15.2 0.0 11 6.3 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CCF73676.1 - 0.028 14.1 0.0 3.6 7.3 0.0 2.4 2 0 0 2 2 2 0 AAA domain KAP_NTPase PF07693.14 CCF73676.1 - 0.029 13.6 0.0 7.6 5.7 0.0 3.0 3 0 0 3 3 3 0 KAP family P-loop domain Bac_DnaA PF00308.18 CCF73676.1 - 0.029 14.2 0.0 0.91 9.3 0.0 2.6 2 1 0 2 2 2 0 Bacterial dnaA protein PhoH PF02562.16 CCF73676.1 - 0.03 13.8 0.0 2 7.9 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein TniB PF05621.11 CCF73676.1 - 0.042 13.3 0.0 13 5.1 0.0 3.0 3 0 0 3 3 3 0 Bacterial TniB protein T2SSE PF00437.20 CCF73676.1 - 0.043 12.9 0.0 1.7 7.6 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein MCM PF00493.23 CCF73676.1 - 0.047 12.8 0.0 8.2 5.4 0.0 2.8 2 1 0 2 2 2 0 MCM P-loop domain SKI PF01202.22 CCF73676.1 - 0.052 13.7 0.1 5.9 7.0 0.0 2.9 3 0 0 3 3 2 0 Shikimate kinase AAA_23 PF13476.6 CCF73676.1 - 0.054 14.0 0.1 11 6.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 CCF73676.1 - 0.068 12.4 0.0 10 5.2 0.0 2.2 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) MMR_HSR1 PF01926.23 CCF73676.1 - 0.076 13.1 0.0 7.2 6.7 0.0 2.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase KTI12 PF08433.10 CCF73676.1 - 0.079 12.4 0.0 2.6 7.4 0.0 2.3 2 0 0 2 2 2 0 Chromatin associated protein KTI12 Rad51 PF08423.11 CCF73676.1 - 0.16 11.2 0.0 0.39 9.9 0.0 1.6 1 0 0 1 1 1 0 Rad51 PduV-EutP PF10662.9 CCF73676.1 - 0.18 11.6 0.0 7.2 6.4 0.0 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation zf_C2H2_13 PF18508.1 CCF73677.1 - 0.018 14.6 0.6 0.37 10.4 0.1 2.9 3 0 0 3 3 3 0 Zinc finger domain JAKMIP_CC3 PF16034.5 CCF73677.1 - 0.059 13.3 0.0 0.13 12.2 0.0 1.5 1 0 0 1 1 1 0 JAKMIP CC3 domain DUF3199 PF11436.8 CCF73678.1 - 0.071 13.1 1.2 0.68 10.0 0.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3199) FANCF PF11107.8 CCF73678.1 - 0.1 11.8 2.5 0.1 11.8 0.4 2.2 2 0 0 2 2 2 0 Fanconi anemia group F protein (FANCF) HIT PF01230.23 CCF73679.1 - 2.1e-27 95.7 0.1 2.5e-27 95.5 0.1 1.1 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 CCF73679.1 - 6.8e-21 74.9 0.2 8.4e-21 74.6 0.2 1.1 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding PolyA_pol_arg_C PF12626.7 CCF73680.1 - 0.019 15.0 0.0 0.046 13.8 0.0 1.7 1 1 0 1 1 1 0 Polymerase A arginine-rich C-terminus TrmE_N PF10396.9 CCF73681.1 - 8.8e-31 106.6 0.0 1.5e-30 105.8 0.0 1.4 1 0 0 1 1 1 1 GTP-binding protein TrmE N-terminus MnmE_helical PF12631.7 CCF73681.1 - 6.5e-24 85.2 0.2 1e-23 84.6 0.2 1.3 1 0 0 1 1 1 1 MnmE helical domain MMR_HSR1 PF01926.23 CCF73681.1 - 2.9e-17 62.8 0.3 8.5e-17 61.3 0.3 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF73681.1 - 2.9e-06 26.9 0.0 5.9e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 CCF73681.1 - 0.027 14.4 0.4 8.8 6.2 0.1 2.8 3 0 0 3 3 3 0 RsgA GTPase Dynamin_N PF00350.23 CCF73681.1 - 0.062 13.4 0.3 0.23 11.5 0.3 2.1 1 1 0 1 1 1 0 Dynamin family PUB PF09409.10 CCF73682.1 - 1.9e-15 56.6 0.7 3.8e-15 55.6 0.2 1.8 2 0 0 2 2 2 1 PUB domain ASL_C PF08328.11 CCF73683.1 - 2.3e-37 127.6 0.7 1.1e-36 125.4 0.0 2.2 2 1 0 2 2 2 1 Adenylosuccinate lyase C-terminal Lyase_1 PF00206.20 CCF73683.1 - 1.2e-35 123.4 0.0 1.6e-35 123.0 0.0 1.1 1 0 0 1 1 1 1 Lyase Vel1p PF10339.9 CCF73683.1 - 0.0059 16.0 0.2 0.81 9.0 0.0 2.6 2 0 0 2 2 2 2 Yeast-specific zinc responsive YIEGIA PF14045.6 CCF73683.1 - 0.1 11.4 0.0 0.19 10.6 0.0 1.3 1 0 0 1 1 1 0 YIEGIA protein Nop PF01798.18 CCF73684.1 - 7.2e-63 212.1 0.2 1e-62 211.6 0.2 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin Prp31_C PF09785.9 CCF73684.1 - 9e-30 104.1 1.3 1.7e-29 103.2 1.3 1.5 1 0 0 1 1 1 1 Prp31 C terminal domain Pkinase PF00069.25 CCF73686.1 - 9e-27 94.1 2.4 6.3e-14 52.0 1.1 2.3 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73686.1 - 3.1e-06 26.7 0.1 0.077 12.3 0.3 2.5 2 1 0 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 CCF73686.1 - 0.00019 20.9 0.0 0.00031 20.2 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 CCF73686.1 - 0.00069 19.3 0.2 0.0014 18.3 0.2 1.4 1 0 0 1 1 1 1 Kinetochore Sim4 complex subunit FTA2 Kinase-like PF14531.6 CCF73686.1 - 0.019 14.3 0.0 0.073 12.4 0.0 1.8 2 0 0 2 2 2 0 Kinase-like Pkinase_fungal PF17667.1 CCF73686.1 - 0.022 13.5 0.2 0.031 13.0 0.2 1.2 1 0 0 1 1 1 0 Fungal protein kinase DXP_reductoisom PF02670.16 CCF73688.1 - 4e-35 121.4 1.2 6.3e-35 120.7 1.2 1.3 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 CCF73688.1 - 1.1e-31 109.5 0.0 1.9e-31 108.7 0.0 1.4 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain DXP_redisom_C PF08436.12 CCF73688.1 - 2.9e-28 97.9 0.0 9.4e-28 96.2 0.0 1.9 2 0 0 2 2 2 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HTH_19 PF12844.7 CCF73689.1 - 0.099 12.7 0.3 0.38 10.8 0.3 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain Josephin PF02099.17 CCF73690.1 - 3.9e-28 98.6 1.4 2.5e-14 53.7 0.0 2.1 1 1 1 2 2 2 2 Josephin Peptidase_C12 PF01088.21 CCF73690.1 - 0.00014 21.7 0.1 0.00069 19.4 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase, family 1 DUF5088 PF17008.5 CCF73690.1 - 0.13 12.0 0.0 0.22 11.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5088) UBX PF00789.20 CCF73691.1 - 8.8e-06 25.8 0.1 6.3e-05 23.1 0.0 2.0 2 0 0 2 2 2 1 UBX domain EF-hand_6 PF13405.6 CCF73692.1 - 5.2e-05 22.9 0.2 0.0058 16.5 0.1 2.9 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 CCF73692.1 - 0.0024 17.3 0.4 0.076 12.6 0.1 2.8 3 0 0 3 3 3 1 EF hand EF-hand_7 PF13499.6 CCF73692.1 - 0.028 14.9 0.1 0.064 13.7 0.1 1.9 1 1 0 1 1 1 0 EF-hand domain pair YppF PF14178.6 CCF73692.1 - 0.058 13.3 0.0 0.096 12.6 0.0 1.3 1 0 0 1 1 1 0 YppF-like protein EF-hand_8 PF13833.6 CCF73692.1 - 0.068 13.0 0.5 4.4 7.2 0.1 3.2 4 1 1 5 5 5 0 EF-hand domain pair Sld7_N PF18636.1 CCF73693.1 - 0.0057 17.0 0.2 2.4 8.5 0.0 4.0 4 0 0 4 4 4 1 Mitochondrial morphogenesis protein SLD7 N-terminal domain DUF4944 PF16302.5 CCF73693.1 - 0.059 13.4 0.1 0.059 13.4 0.1 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4944) DUF1866 PF08952.11 CCF73693.1 - 0.77 9.6 5.8 0.52 10.2 0.1 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF1866) TAFII55_N PF04658.13 CCF73696.1 - 3.3e-23 82.2 0.1 7e-23 81.1 0.0 1.5 2 0 0 2 2 2 1 TAFII55 protein conserved region DUF4047 PF13256.6 CCF73696.1 - 0.13 12.5 0.9 0.36 11.0 0.9 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4047) Metallophos PF00149.28 CCF73697.1 - 1.6e-09 38.6 1.1 2.2e-09 38.1 1.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase DUF2480 PF10652.9 CCF73697.1 - 0.14 12.1 0.7 10 6.0 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF2480) SIP1 PF04938.12 CCF73698.1 - 5.1e-10 39.4 0.1 1.6e-09 37.8 0.1 1.7 1 1 0 1 1 1 1 Survival motor neuron (SMN) interacting protein 1 (SIP1) Nop PF01798.18 CCF73699.1 - 1.4e-81 273.4 0.2 1.8e-81 273.0 0.2 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 CCF73699.1 - 7e-13 48.8 0.0 2.2e-12 47.2 0.0 1.9 1 0 0 1 1 1 1 NOP5NT (NUC127) domain Sulfate_transp PF00916.20 CCF73700.1 - 1e-26 93.6 24.3 1e-26 93.6 24.3 2.6 2 1 0 2 2 2 1 Sulfate permease family Herpes_U55 PF06501.11 CCF73700.1 - 0.00025 20.0 0.3 0.00042 19.2 0.3 1.3 1 0 0 1 1 1 1 Human herpesvirus U55 protein MFS_MOT1 PF16983.5 CCF73700.1 - 0.0013 19.1 3.3 0.0013 19.1 3.3 4.2 3 1 1 4 4 4 1 Molybdate transporter of MFS superfamily TPR_1 PF00515.28 CCF73701.1 - 0.032 14.0 0.2 0.089 12.6 0.1 1.7 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF21 PF01595.20 CCF73702.1 - 1.5e-35 122.5 3.2 2.1e-35 122.0 3.2 1.2 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 CCF73702.1 - 0.00064 20.1 0.4 0.086 13.3 0.0 2.9 2 0 0 2 2 2 1 CBS domain cNMP_binding PF00027.29 CCF73702.1 - 0.0013 18.8 0.0 0.0054 16.8 0.0 2.0 2 0 0 2 2 2 1 Cyclic nucleotide-binding domain MscL PF01741.18 CCF73702.1 - 1 9.7 4.1 3.2 8.1 3.1 2.4 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL Profilin PF00235.19 CCF73703.1 - 1.3e-15 57.7 0.4 2.4e-15 56.9 0.4 1.4 1 1 0 1 1 1 1 Profilin Methyltr_RsmB-F PF01189.17 CCF73704.1 - 1.5e-58 197.8 0.1 2.4e-58 197.1 0.1 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 CCF73704.1 - 3.4e-08 33.9 0.0 2.4e-07 31.1 0.0 2.3 3 0 0 3 3 3 1 N-terminal domain of 16S rRNA methyltransferase RsmF Met_10 PF02475.16 CCF73704.1 - 0.00091 19.0 0.0 0.003 17.3 0.0 1.7 2 0 0 2 2 2 1 Met-10+ like-protein FtsJ PF01728.19 CCF73704.1 - 0.0018 18.4 0.0 0.0029 17.7 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Ras PF00071.22 CCF73705.1 - 6.7e-51 172.1 0.2 5.7e-50 169.1 0.2 1.9 1 1 0 1 1 1 1 Ras family Roc PF08477.13 CCF73705.1 - 1.2e-29 102.9 0.2 4.7e-28 97.8 0.2 2.4 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF73705.1 - 6.7e-13 48.5 0.0 9.2e-13 48.0 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 CCF73705.1 - 6.2e-07 29.1 0.1 1e-06 28.4 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 CCF73705.1 - 4.2e-05 23.6 0.1 7.9e-05 22.7 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF73705.1 - 0.00039 19.8 0.0 0.00055 19.4 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region DUF3873 PF12989.7 CCF73705.1 - 0.048 14.0 0.0 0.089 13.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function, B. Theta Gene description (DUF3873) RsgA_GTPase PF03193.16 CCF73705.1 - 0.24 11.3 0.6 0.7 9.8 0.1 2.1 2 2 0 2 2 2 0 RsgA GTPase Proteasome PF00227.26 CCF73706.1 - 7.2e-36 123.5 0.1 1.9e-18 66.6 0.0 2.1 2 0 0 2 2 2 2 Proteasome subunit zf-TRAF PF02176.18 CCF73707.1 - 0.0075 16.9 1.7 0.015 16.0 1.7 1.5 1 0 0 1 1 1 1 TRAF-type zinc finger Ala_racemase_N PF01168.20 CCF73708.1 - 5.3e-14 52.4 0.0 6.5e-14 52.1 0.0 1.0 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Bot1p PF12298.8 CCF73708.1 - 0.11 12.7 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Eukaryotic mitochondrial regulator protein NPL4 PF05021.15 CCF73709.1 - 6.4e-35 121.0 0.2 2.6e-33 115.7 0.2 2.7 1 1 0 1 1 1 1 NPL4 family UN_NPL4 PF11543.8 CCF73709.1 - 8.6e-10 39.0 0.0 2e-09 37.8 0.0 1.7 1 0 0 1 1 1 1 Nuclear pore localisation protein NPL4 zf-NPL4 PF05020.15 CCF73709.1 - 1.1e-06 28.8 0.6 4.2e-06 27.0 0.2 2.2 2 1 0 2 2 2 1 NPL4 family, putative zinc binding region YukD PF08817.10 CCF73709.1 - 0.18 12.5 0.0 5 7.9 0.0 2.5 2 0 0 2 2 2 0 WXG100 protein secretion system (Wss), protein YukD Rhomboid PF01694.22 CCF73710.1 - 3.9e-52 176.2 23.0 1.1e-29 103.4 9.1 2.6 2 0 0 2 2 2 2 Rhomboid family ATP-synt_DE_N PF02823.16 CCF73710.1 - 0.017 15.0 0.0 9.5 6.2 0.0 2.4 2 0 0 2 2 2 0 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FeThRed_B PF02943.15 CCF73710.1 - 0.085 12.9 0.0 0.36 10.8 0.0 2.0 2 0 0 2 2 2 0 Ferredoxin thioredoxin reductase catalytic beta chain Ribosomal_L4 PF00573.22 CCF73712.1 - 1e-36 126.5 0.1 1.9e-36 125.5 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribos_L4_asso_C PF14374.6 CCF73712.1 - 7.4e-05 22.7 2.2 0.0015 18.5 0.1 2.8 2 1 0 2 2 2 1 60S ribosomal protein L4 C-terminal domain MORN PF02493.20 CCF73714.1 - 2.3e-29 99.5 55.3 2.3e-07 30.3 1.8 7.2 7 0 0 7 7 7 6 MORN repeat Tudor_2 PF18104.1 CCF73714.1 - 0.033 13.9 7.2 2.5 7.9 0.0 4.4 4 0 0 4 4 4 0 Jumonji domain-containing protein 2A Tudor domain IBN_N PF03810.19 CCF73715.1 - 0.0017 18.2 0.2 0.015 15.2 0.0 2.7 3 0 0 3 3 3 1 Importin-beta N-terminal domain GGA_N-GAT PF18308.1 CCF73715.1 - 0.0055 16.3 0.1 0.016 14.8 0.1 1.8 1 0 0 1 1 1 1 GGA N-GAT domain s48_45 PF07422.13 CCF73716.1 - 9.5 6.9 26.4 0.11 13.1 2.3 4.7 5 1 0 5 5 5 0 Sexual stage antigen s48/45 domain RBD-FIP PF09457.10 CCF73717.1 - 0.073 13.0 0.2 0.45 10.5 0.0 2.1 2 0 0 2 2 2 0 FIP domain FtsL PF04999.13 CCF73718.1 - 0.013 15.4 0.1 0.017 15.1 0.1 1.2 1 0 0 1 1 1 0 Cell division protein FtsL Guanylate_kin PF00625.21 CCF73719.1 - 6.7e-46 156.3 0.0 8.1e-46 156.0 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase MMR_HSR1 PF01926.23 CCF73719.1 - 8e-05 22.7 0.3 0.0004 20.4 0.3 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CCF73719.1 - 0.0085 16.0 0.3 0.016 15.1 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 CCF73719.1 - 0.014 15.9 0.2 0.058 13.9 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_18 PF13238.6 CCF73719.1 - 0.024 15.2 0.6 0.12 12.9 0.6 2.1 1 1 0 1 1 1 0 AAA domain ADK PF00406.22 CCF73719.1 - 0.047 13.8 0.5 10 6.2 0.1 2.3 2 0 0 2 2 2 0 Adenylate kinase AAA_7 PF12775.7 CCF73719.1 - 0.062 12.8 0.0 0.14 11.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_16 PF13191.6 CCF73719.1 - 0.088 13.2 0.0 0.14 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 CCF73719.1 - 0.1 13.0 0.1 0.2 12.1 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF73719.1 - 0.1 12.8 0.0 0.2 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 CCF73719.1 - 0.13 12.7 1.1 0.75 10.2 0.1 2.1 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 CCF73719.1 - 0.13 12.0 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain PFK PF00365.20 CCF73720.1 - 5e-56 190.1 0.1 1.8e-39 135.8 0.0 3.3 4 1 1 5 5 5 2 Phosphofructokinase Pro_isomerase PF00160.21 CCF73722.1 - 2.5e-51 174.1 0.4 8.6e-51 172.3 0.1 1.9 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rtf2 PF04641.12 CCF73722.1 - 4.7e-07 29.5 0.9 1.7e-06 27.6 0.3 1.9 1 1 1 2 2 2 1 Rtf2 RING-finger Laminin_II PF06009.12 CCF73726.1 - 0.033 14.2 1.0 0.084 12.9 0.6 1.9 2 0 0 2 2 2 0 Laminin Domain II SH3BP5 PF05276.14 CCF73726.1 - 0.056 13.2 2.0 0.091 12.5 2.0 1.3 1 0 0 1 1 1 0 SH3 domain-binding protein 5 (SH3BP5) DUF3800 PF12686.7 CCF73726.1 - 0.34 11.5 4.7 0.32 11.6 3.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3800) HEAT PF02985.22 CCF73728.1 - 2.1e-18 64.8 0.6 0.015 15.5 0.0 9.4 10 0 0 10 10 10 4 HEAT repeat HEAT_2 PF13646.6 CCF73728.1 - 2.5e-15 56.6 0.0 0.0029 17.9 0.0 6.1 5 2 2 7 7 7 5 HEAT repeats Cnd1 PF12717.7 CCF73728.1 - 0.00014 21.9 11.5 0.0092 16.0 0.2 4.7 2 1 3 5 5 5 2 non-SMC mitotic condensation complex subunit 1 TAF6_C PF07571.13 CCF73728.1 - 0.024 15.0 0.0 0.079 13.3 0.0 2.0 1 0 0 1 1 1 0 TAF6 C-terminal HEAT repeat domain Vac14_Fab1_bd PF12755.7 CCF73728.1 - 0.044 14.4 5.2 11 6.7 0.1 5.1 3 2 2 5 5 5 0 Vacuolar 14 Fab1-binding region RrnaAD PF00398.20 CCF73729.1 - 7.7e-56 189.1 0.0 1.2e-55 188.5 0.0 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_31 PF13847.6 CCF73729.1 - 1e-07 31.9 0.0 1.6e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF73729.1 - 3.3e-07 30.9 0.0 6.2e-07 30.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 CCF73729.1 - 7e-05 22.4 0.0 0.00012 21.6 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Ubie_methyltran PF01209.18 CCF73729.1 - 0.00027 20.4 0.0 0.00044 19.7 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 CCF73729.1 - 0.00043 20.9 0.0 0.00084 19.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CCF73729.1 - 0.0015 18.3 0.0 0.0023 17.7 0.0 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 CCF73729.1 - 0.0053 17.5 0.0 0.0096 16.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF73729.1 - 0.02 14.8 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain DREV PF05219.12 CCF73729.1 - 0.023 13.8 0.0 0.04 13.0 0.0 1.4 1 0 0 1 1 1 0 DREV methyltransferase HCNGP PF07818.13 CCF73729.1 - 0.057 14.1 0.0 0.22 12.2 0.0 2.0 1 1 1 2 2 2 0 HCNGP-like protein Methyltransf_32 PF13679.6 CCF73729.1 - 0.093 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 CCF73729.1 - 0.23 10.7 0.0 0.42 9.8 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase zf-HIT PF04438.16 CCF73730.1 - 5.7e-07 29.3 11.0 9.6e-07 28.6 11.0 1.4 1 0 0 1 1 1 1 HIT zinc finger DUF2116 PF09889.9 CCF73730.1 - 4.7 7.3 11.6 2 8.5 1.0 3.2 1 1 2 3 3 3 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Phage_int_SAM_5 PF13102.6 CCF73731.1 - 0.55 10.6 5.5 0.76 10.1 0.6 2.3 2 1 0 2 2 2 0 Phage integrase SAM-like domain RHD3 PF05879.12 CCF73732.1 - 6.5e-86 289.1 16.7 5.7e-83 279.4 5.9 2.7 1 1 1 2 2 2 2 Root hair defective 3 GTP-binding protein (RHD3) Dynamin_N PF00350.23 CCF73732.1 - 0.00055 20.0 0.9 0.0013 18.8 0.1 2.1 2 0 0 2 2 2 1 Dynamin family MMR_HSR1 PF01926.23 CCF73732.1 - 0.0011 19.0 0.0 0.003 17.6 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 CCF73732.1 - 0.0044 17.2 0.1 0.017 15.3 0.0 2.1 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase CelTOS PF18659.1 CCF73732.1 - 0.064 13.7 2.6 0.36 11.3 1.7 2.5 2 0 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites Peptidase_C14 PF00656.22 CCF73733.1 - 2e-27 96.7 0.0 2.9e-27 96.2 0.0 1.2 1 0 0 1 1 1 1 Caspase domain PFU PF09070.11 CCF73734.1 - 0.0036 17.5 0.1 0.016 15.5 0.0 2.0 2 0 0 2 2 2 1 PFU (PLAA family ubiquitin binding) Big_3_3 PF13750.6 CCF73734.1 - 0.019 14.6 0.0 0.046 13.4 0.0 1.6 1 1 0 1 1 1 0 Bacterial Ig-like domain (group 3) tRNA-synt_2 PF00152.20 CCF73735.1 - 2.2e-45 155.1 0.0 1.1e-42 146.3 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CCF73735.1 - 7.7e-07 29.0 0.1 1.4e-06 28.2 0.1 1.4 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CCF73735.1 - 3.2e-05 23.5 0.0 0.14 11.6 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) Prefoldin_2 PF01920.20 CCF73736.1 - 3.2e-11 43.1 0.2 3.7e-11 42.9 0.2 1.1 1 0 0 1 1 1 1 Prefoldin subunit DUF5062 PF16691.5 CCF73736.1 - 0.056 13.6 0.2 0.11 12.7 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5062) RNA_pol_L_2 PF13656.6 CCF73738.1 - 5.9e-26 90.0 0.0 6.6e-26 89.9 0.0 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 CCF73738.1 - 1.4e-06 27.6 0.0 1.9e-06 27.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF3907 PF13047.6 CCF73738.1 - 0.11 12.4 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3907) ALAD PF00490.21 CCF73739.1 - 7.6e-62 209.3 1.7 1.1e-38 133.2 0.4 2.3 2 0 0 2 2 2 2 Delta-aminolevulinic acid dehydratase DUF2607 PF10795.9 CCF73739.1 - 0.036 14.2 0.2 0.13 12.4 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2607) Peptidase_M16 PF00675.20 CCF73740.1 - 5.1e-21 75.2 1.0 2.4e-18 66.5 0.1 2.6 3 0 0 3 3 3 2 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 CCF73740.1 - 1.6e-11 44.6 0.1 2.5e-07 30.9 0.0 4.3 4 1 0 4 4 4 2 Peptidase M16 inactive domain zf-B_box PF00643.24 CCF73741.1 - 1.5e-08 34.6 11.8 3.4e-05 23.9 2.3 2.5 2 0 0 2 2 2 2 B-box zinc finger Glyco_transf_29 PF00777.18 CCF73741.1 - 0.014 14.8 0.1 0.025 14.0 0.1 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 29 (sialyltransferase) TIM PF00121.18 CCF73742.1 - 3.5e-84 282.0 0.9 4e-84 281.8 0.9 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase CLP1_P PF16575.5 CCF73743.1 - 2.6e-26 92.6 0.1 4.8e-26 91.7 0.1 1.4 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop ParA PF10609.9 CCF73743.1 - 0.0011 18.5 0.0 0.0022 17.5 0.0 1.4 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 CCF73743.1 - 0.0013 18.8 0.0 0.002 18.2 0.0 1.4 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_25 PF13481.6 CCF73743.1 - 0.011 15.3 0.0 0.018 14.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CCF73743.1 - 0.03 14.6 0.0 0.059 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_31 PF13614.6 CCF73743.1 - 0.044 13.7 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CCF73743.1 - 0.055 13.9 0.0 0.18 12.2 0.0 1.8 2 0 0 2 2 2 0 RNA helicase MeaB PF03308.16 CCF73743.1 - 0.088 11.8 0.0 0.14 11.1 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MipZ PF09140.11 CCF73743.1 - 0.099 11.9 0.0 0.15 11.3 0.0 1.2 1 0 0 1 1 1 0 ATPase MipZ AAA_16 PF13191.6 CCF73743.1 - 0.11 12.8 0.0 0.21 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Rad21_Rec8 PF04824.16 CCF73744.1 - 2.7e-06 26.5 0.1 7.2e-06 25.2 0.0 1.7 2 0 0 2 2 2 1 Conserved region of Rad21 / Rec8 like protein Motile_Sperm PF00635.26 CCF73745.1 - 8e-23 80.4 0.0 1.4e-22 79.5 0.0 1.4 1 1 0 1 1 1 1 MSP (Major sperm protein) domain ASH PF15780.5 CCF73745.1 - 0.023 14.9 0.1 0.063 13.5 0.0 1.8 2 0 0 2 2 2 0 Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin LNS2 PF08235.13 CCF73746.1 - 1.3e-91 306.1 0.0 1.9e-91 305.6 0.0 1.2 1 0 0 1 1 1 1 LNS2 (Lipin/Ned1/Smp2) Lipin_N PF04571.14 CCF73746.1 - 4.2e-23 81.2 0.0 1e-22 80.0 0.0 1.7 1 0 0 1 1 1 1 lipin, N-terminal conserved region Lipin_mid PF16876.5 CCF73746.1 - 3.5e-17 62.4 0.0 6.5e-17 61.5 0.0 1.4 1 0 0 1 1 1 1 Lipin/Ned1/Smp2 multi-domain protein middle domain RNA_pol_Rpb6 PF01192.22 CCF73747.1 - 6e-18 64.5 0.0 9e-18 63.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb6 DHHC PF01529.20 CCF73748.1 - 5e-28 97.9 15.8 5e-28 97.9 15.8 2.6 3 1 0 3 3 3 1 DHHC palmitoyltransferase Ank_2 PF12796.7 CCF73748.1 - 2.9e-23 82.2 0.0 2.2e-10 41.0 0.0 2.8 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 CCF73748.1 - 1.1e-20 73.8 0.3 8.3e-07 29.4 0.1 4.4 3 1 1 4 4 4 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 CCF73748.1 - 1.5e-18 64.9 1.0 0.0041 17.5 0.1 6.1 5 0 0 5 5 5 4 Ankyrin repeat Ank PF00023.30 CCF73748.1 - 9.4e-15 54.3 0.1 0.00095 19.5 0.1 5.7 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 CCF73748.1 - 1.7e-12 47.3 0.2 2e-05 24.8 0.1 4.0 3 1 0 3 3 3 2 Ankyrin repeats (many copies) DUF4453 PF14627.6 CCF73749.1 - 0.082 13.0 0.0 0.16 12.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4453) 2-oxoacid_dh PF00198.23 CCF73750.1 - 2.3e-59 200.7 0.8 3.4e-59 200.1 0.8 1.3 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 CCF73750.1 - 2.3e-18 65.8 1.6 5.6e-18 64.5 1.6 1.7 1 0 0 1 1 1 1 Biotin-requiring enzyme E3_binding PF02817.17 CCF73750.1 - 4.3e-14 52.6 0.1 1.1e-13 51.3 0.1 1.7 1 0 0 1 1 1 1 e3 binding domain Biotin_lipoyl_2 PF13533.6 CCF73750.1 - 7.2e-06 25.7 0.1 1.7e-05 24.5 0.1 1.6 1 0 0 1 1 1 1 Biotin-lipoyl like HlyD_D23 PF16576.5 CCF73750.1 - 5.2e-05 22.6 0.0 9.3e-05 21.7 0.0 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion GCV_H PF01597.19 CCF73750.1 - 0.012 15.5 0.2 0.031 14.2 0.2 1.7 1 0 0 1 1 1 0 Glycine cleavage H-protein HlyD_3 PF13437.6 CCF73750.1 - 0.015 15.9 0.2 0.11 13.2 0.0 2.3 2 1 1 3 3 3 0 HlyD family secretion protein PYNP_C PF07831.13 CCF73750.1 - 0.026 14.2 0.1 6.2 6.6 0.0 2.5 2 0 0 2 2 2 0 Pyrimidine nucleoside phosphorylase C-terminal domain IMCp PF12314.8 CCF73751.1 - 4.5e-24 84.6 98.5 2.3e-17 63.0 35.8 4.4 1 1 2 4 4 4 4 Inner membrane complex protein TLD PF07534.16 CCF73753.1 - 3.6e-14 53.2 0.1 9.1e-14 51.9 0.1 1.7 1 0 0 1 1 1 1 TLD RabGAP-TBC PF00566.18 CCF73753.1 - 1.3e-06 28.2 5.0 2.8e-06 27.1 5.0 1.5 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Cyclin_N PF00134.23 CCF73754.1 - 2.6e-06 27.2 0.2 1.4e-05 24.8 0.0 2.1 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cren7 PF11520.8 CCF73754.1 - 0.004 17.0 0.0 0.0078 16.1 0.0 1.4 1 0 0 1 1 1 1 Chromatin protein Cren7 Cyclin_C_2 PF16899.5 CCF73754.1 - 0.0089 16.4 0.4 0.03 14.7 0.1 2.0 2 0 0 2 2 2 1 Cyclin C-terminal domain AMP-binding PF00501.28 CCF73755.1 - 3.5e-07 29.2 0.0 0.015 13.9 0.0 2.1 2 0 0 2 2 2 2 AMP-binding enzyme DEAD PF00270.29 CCF73756.1 - 1.2e-17 64.3 0.0 2.6e-17 63.1 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase RQC PF09382.10 CCF73756.1 - 7.3e-17 61.2 0.0 2e-16 59.8 0.0 1.7 1 0 0 1 1 1 1 RQC domain Helicase_C PF00271.31 CCF73756.1 - 7.9e-16 58.4 0.0 2.7e-15 56.7 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF73756.1 - 4.9e-06 26.7 0.0 1.1e-05 25.5 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit RecQ_Zn_bind PF16124.5 CCF73756.1 - 5e-06 27.2 1.5 4.3e-05 24.2 0.2 2.7 2 0 0 2 2 2 1 RecQ zinc-binding PH PF00169.29 CCF73757.1 - 0.069 13.7 0.0 0.18 12.3 0.0 1.7 1 0 0 1 1 1 0 PH domain Pet191_N PF10203.9 CCF73758.1 - 2.6e-16 59.6 2.3 5e-16 58.7 2.3 1.5 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 PH PF00169.29 CCF73758.1 - 0.019 15.5 0.0 0.036 14.6 0.0 1.5 1 0 0 1 1 1 0 PH domain Kri1_C PF12936.7 CCF73759.1 - 5.8e-14 52.1 0.1 5.8e-14 52.1 0.1 3.8 3 1 1 4 4 4 1 KRI1-like family C-terminal Kri1 PF05178.12 CCF73759.1 - 2e-12 47.6 1.9 2e-12 47.6 1.9 2.6 1 1 1 2 2 2 1 KRI1-like family ZZ PF00569.17 CCF73759.1 - 0.0016 18.2 4.7 0.004 16.9 4.7 1.6 1 0 0 1 1 1 1 Zinc finger, ZZ type FemAB_like PF04339.12 CCF73760.1 - 0.077 12.1 0.2 0.15 11.2 0.2 1.4 1 0 0 1 1 1 0 Peptidogalycan biosysnthesis/recognition Ribosomal_L44 PF00935.19 CCF73761.1 - 7.3e-33 112.9 10.9 7.3e-33 112.9 10.9 1.6 1 1 1 2 2 2 1 Ribosomal protein L44 DAN PF03045.15 CCF73761.1 - 0.012 15.7 4.5 0.016 15.2 4.5 1.1 1 0 0 1 1 1 0 DAN domain Ribosomal_S6 PF01250.17 CCF73762.1 - 1.1e-13 51.2 0.0 1.4e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S6 Shugoshin_N PF07558.11 CCF73762.1 - 0.014 15.2 0.4 0.62 10.0 0.0 2.3 2 0 0 2 2 2 0 Shugoshin N-terminal coiled-coil region GPHR_N PF12537.8 CCF73763.1 - 0.0064 16.6 0.0 0.015 15.3 0.0 1.6 1 0 0 1 1 1 1 The Golgi pH Regulator (GPHR) Family N-terminal FlaC_arch PF05377.11 CCF73763.1 - 0.082 13.3 0.5 0.2 12.1 0.2 1.8 1 1 0 1 1 1 0 Flagella accessory protein C (FlaC) IFT57 PF10498.9 CCF73763.1 - 0.15 11.0 0.2 0.21 10.6 0.2 1.1 1 0 0 1 1 1 0 Intra-flagellar transport protein 57 TPR_2 PF07719.17 CCF73764.1 - 4.8e-05 23.2 1.2 0.2 11.9 0.1 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73764.1 - 0.00011 21.9 1.3 1.5 8.8 0.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 CCF73764.1 - 0.0021 18.3 0.4 0.18 12.1 0.0 3.3 2 1 1 3 3 3 1 Tetratricopeptide repeat Arm PF00514.23 CCF73764.1 - 0.0028 17.6 0.0 0.83 9.8 0.0 3.8 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat TPR_16 PF13432.6 CCF73764.1 - 0.0031 18.1 0.2 8.3 7.1 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 CCF73764.1 - 0.11 13.0 0.2 11 6.7 0.4 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 CCF73764.1 - 0.2 12.6 0.9 79 4.5 0.0 3.9 3 0 0 3 3 3 0 Tetratricopeptide repeat Peptidase_M41 PF01434.18 CCF73765.1 - 2.6e-47 161.1 0.0 4.9e-47 160.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 CCF73765.1 - 3.4e-43 147.2 0.0 1e-42 145.7 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.13 CCF73765.1 - 1.1e-05 24.9 0.5 0.00035 19.9 0.0 2.6 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_18 PF13238.6 CCF73765.1 - 0.00011 22.7 1.0 0.026 15.1 0.0 3.2 3 0 0 3 3 3 1 AAA domain RuvB_N PF05496.12 CCF73765.1 - 0.00018 21.3 0.0 0.00051 19.8 0.0 1.8 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 CCF73765.1 - 0.0002 21.6 1.6 0.027 14.7 0.5 3.4 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 CCF73765.1 - 0.00045 20.7 1.2 0.42 11.0 0.0 2.9 3 0 0 3 3 3 2 AAA domain AAA_16 PF13191.6 CCF73765.1 - 0.00066 20.1 0.5 0.03 14.7 0.1 2.9 2 1 1 3 3 2 1 AAA ATPase domain IstB_IS21 PF01695.17 CCF73765.1 - 0.0015 18.3 0.0 0.0058 16.4 0.0 2.0 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_5 PF07728.14 CCF73765.1 - 0.0031 17.5 0.1 0.015 15.3 0.1 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 CCF73765.1 - 0.0039 16.9 0.1 0.0098 15.7 0.1 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_33 PF13671.6 CCF73765.1 - 0.0091 16.2 0.0 0.036 14.2 0.0 2.1 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 CCF73765.1 - 0.014 14.8 2.7 1.1 8.5 0.0 3.4 4 0 0 4 4 4 0 KaiC AAA_24 PF13479.6 CCF73765.1 - 0.015 15.1 0.1 0.86 9.3 0.0 3.4 3 0 0 3 3 3 0 AAA domain AAA_2 PF07724.14 CCF73765.1 - 0.016 15.3 0.0 0.089 12.9 0.0 2.3 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 CCF73765.1 - 0.02 14.3 0.1 0.039 13.3 0.1 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI REC1 PF18501.1 CCF73765.1 - 0.03 14.2 5.3 2.2 8.1 0.3 2.3 2 0 0 2 2 2 0 Alpha helical recognition lobe domain AAA_7 PF12775.7 CCF73765.1 - 0.071 12.6 0.0 0.23 10.9 0.0 1.8 1 1 0 1 1 1 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 CCF73765.1 - 0.085 12.6 0.0 0.23 11.2 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain TsaE PF02367.17 CCF73765.1 - 0.088 12.8 0.0 0.24 11.4 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 CCF73765.1 - 0.089 13.0 0.0 0.27 11.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 CCF73765.1 - 0.097 11.7 0.0 0.23 10.5 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 CitT PF12431.8 CCF73765.1 - 0.14 12.5 1.4 2.1 8.8 0.2 2.6 2 0 0 2 2 2 0 Transcriptional regulator PRC2_HTH_1 PF18118.1 CCF73765.1 - 1.8 9.4 4.3 0.77 10.6 0.5 2.2 2 0 0 2 2 2 0 Polycomb repressive complex 2 tri-helical domain Ribosomal_L6e PF01159.19 CCF73766.1 - 5.1e-26 91.4 0.6 8.1e-26 90.7 0.6 1.3 1 0 0 1 1 1 1 Ribosomal protein L6e EF1G PF00647.19 CCF73767.1 - 2.1e-37 127.4 0.1 4.9e-37 126.3 0.1 1.7 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_C PF00043.25 CCF73767.1 - 0.00044 20.4 0.0 0.00093 19.4 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 CCF73767.1 - 0.0016 18.6 0.1 0.0041 17.3 0.1 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 CCF73767.1 - 0.069 13.2 0.0 0.17 11.9 0.0 1.7 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain SprT-like PF10263.9 CCF73768.1 - 9.7e-27 93.1 0.0 1.5e-26 92.5 0.0 1.3 1 0 0 1 1 1 1 SprT-like family Peptidase_M91 PF14891.6 CCF73768.1 - 0.082 13.2 0.0 0.1 12.9 0.0 1.2 1 0 0 1 1 1 0 Effector protein HAD_SAK_1 PF10307.9 CCF73768.1 - 0.19 11.5 0.7 1 9.1 0.2 2.0 2 0 0 2 2 2 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins Tox-REase-9 PF15650.6 CCF73769.1 - 0.05 13.9 0.1 0.12 12.7 0.1 1.6 1 0 0 1 1 1 0 Restriction endonuclease fold toxin 9 CPW_WPC PF09717.10 CCF73771.1 - 7.5e-16 58.9 20.7 2.4e-09 38.0 5.4 4.2 4 0 0 4 4 4 3 Plasmodium falciparum domain of unknown function (CPW_WPC) Imm74 PF15603.6 CCF73771.1 - 0.097 12.9 0.1 1.2 9.3 0.3 2.3 2 0 0 2 2 2 0 Immunity protein 74 WD40 PF00400.32 CCF73772.1 - 1.3e-25 89.1 26.8 7.5e-06 26.6 0.5 10.8 10 1 0 10 10 10 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF73772.1 - 1.5e-11 44.4 1.3 5.1 7.5 0.0 8.3 5 3 3 8 8 8 4 Anaphase-promoting complex subunit 4 WD40 domain Utp12 PF04003.12 CCF73772.1 - 3.2e-08 33.8 0.7 7.6e-08 32.6 0.7 1.7 1 0 0 1 1 1 1 Dip2/Utp12 Family Ge1_WD40 PF16529.5 CCF73772.1 - 0.00068 18.7 1.0 0.88 8.5 0.0 4.1 5 0 0 5 5 5 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Glyco_hydro_49 PF03718.13 CCF73772.1 - 0.018 15.1 0.0 0.1 12.6 0.0 2.3 2 0 0 2 2 2 0 Glycosyl hydrolase family 49 DUF502 PF04367.13 CCF73773.1 - 0.022 14.6 0.1 0.036 14.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF502) PUCC PF03209.15 CCF73773.1 - 0.048 12.7 0.0 0.06 12.3 0.0 1.1 1 0 0 1 1 1 0 PUCC protein COX6A PF02046.15 CCF73774.1 - 0.019 15.4 0.0 0.042 14.3 0.0 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa CBF PF03914.17 CCF73775.1 - 0.13 12.3 1.7 0.31 11.1 0.3 2.3 2 0 0 2 2 2 0 CBF/Mak21 family Adap_comp_sub PF00928.21 CCF73776.1 - 1.6e-43 149.0 0.5 2.4e-43 148.4 0.5 1.2 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Alba PF01918.21 CCF73777.1 - 0.099 12.5 0.0 0.22 11.4 0.0 1.6 1 0 0 1 1 1 0 Alba LIP1 PF15904.5 CCF73778.1 - 0.016 15.5 0.0 0.023 15.0 0.0 1.3 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 DnaJ PF00226.31 CCF73779.1 - 5.4e-16 58.5 2.2 1.4e-15 57.1 2.2 1.8 1 0 0 1 1 1 1 DnaJ domain DUF1279 PF06916.13 CCF73779.1 - 9e-10 39.0 1.0 2.5e-09 37.6 0.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1279) DUF3395 PF11875.8 CCF73779.1 - 2.3e-06 27.6 0.1 3.2e-05 23.9 0.1 2.5 1 1 0 1 1 1 1 Domain of unknown function (DUF3395) Spore_III_AF PF09581.10 CCF73779.1 - 0.11 12.5 0.6 0.21 11.6 0.6 1.4 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) FPL PF09758.9 CCF73780.1 - 1.4e-25 90.0 3.9 1.4e-25 90.0 3.9 2.9 2 1 1 3 3 3 1 Uncharacterised conserved protein S1-P1_nuclease PF02265.16 CCF73781.1 - 1.7e-33 116.5 0.0 2.6e-33 115.9 0.0 1.3 1 1 0 1 1 1 1 S1/P1 Nuclease SDA1 PF05285.12 CCF73783.1 - 0.3 10.5 45.2 1.3e+02 1.8 43.2 3.5 1 1 1 2 2 2 0 SDA1 ICA69 PF04629.14 CCF73783.1 - 3.5 7.9 9.9 2 8.7 7.4 1.8 1 1 1 2 2 2 0 Islet cell autoantigen ICA69, C-terminal domain DUF1869 PF08956.10 CCF73784.1 - 0.0012 18.7 0.6 0.0029 17.5 0.6 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1869) CTD PF12815.7 CCF73786.1 - 0.15 12.7 3.0 0.15 12.6 0.3 2.3 2 0 0 2 2 2 0 Spt5 C-terminal nonapeptide repeat binding Spt4 Arf PF00025.21 CCF73787.1 - 9.2e-55 184.8 0.1 1.1e-54 184.6 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 CCF73787.1 - 2.6e-15 56.7 0.0 4.1e-15 56.1 0.0 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 CCF73787.1 - 6.5e-13 48.6 0.0 7.6e-13 48.4 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 CCF73787.1 - 5.4e-11 42.2 1.3 1.1e-08 34.6 0.2 2.4 1 1 1 2 2 2 2 G-protein alpha subunit SRPRB PF09439.10 CCF73787.1 - 4.6e-10 39.2 0.0 8.3e-10 38.4 0.0 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit MMR_HSR1 PF01926.23 CCF73787.1 - 1.6e-09 37.8 0.0 4.1e-09 36.5 0.0 1.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF73787.1 - 1.5e-07 31.0 0.0 2e-07 30.6 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 CCF73787.1 - 0.0036 16.9 0.0 0.27 10.7 0.0 2.1 1 1 0 2 2 2 1 Elongation factor Tu GTP binding domain SAM_1 PF00536.30 CCF73787.1 - 0.063 13.7 0.0 0.13 12.7 0.0 1.5 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Thioredoxin_2 PF13098.6 CCF73787.1 - 0.087 13.3 0.0 0.11 12.9 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like domain RsgA_GTPase PF03193.16 CCF73787.1 - 0.13 12.2 0.1 5 7.0 0.0 2.1 2 0 0 2 2 2 0 RsgA GTPase ATPase_2 PF01637.18 CCF73787.1 - 0.14 12.1 0.2 0.15 11.9 0.2 1.3 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea PPK2 PF03976.14 CCF73787.1 - 0.27 10.7 0.8 0.74 9.3 0.0 1.9 2 1 1 3 3 3 0 Polyphosphate kinase 2 (PPK2) Tfb5 PF06331.12 CCF73788.1 - 1.2e-11 44.4 1.2 1.6e-11 44.0 1.2 1.1 1 0 0 1 1 1 1 Transcription factor TFIIH complex subunit Tfb5 GCV_T PF01571.21 CCF73789.1 - 1.7e-22 80.1 0.0 1.4e-21 77.1 0.0 1.9 1 1 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 CCF73789.1 - 5e-05 23.1 0.0 0.00018 21.4 0.0 2.0 2 0 0 2 2 2 1 Glycine cleavage T-protein C-terminal barrel domain HEAT PF02985.22 CCF73790.1 - 5.7e-05 23.0 0.1 0.02 15.1 0.0 4.1 3 0 0 3 3 3 1 HEAT repeat HEAT_2 PF13646.6 CCF73790.1 - 0.0023 18.3 0.0 0.011 16.1 0.0 2.2 1 0 0 1 1 1 1 HEAT repeats Atg14 PF10186.9 CCF73790.1 - 0.004 16.3 5.4 0.0094 15.1 5.4 1.6 1 0 0 1 1 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 Mei5 PF10376.9 CCF73790.1 - 0.0088 15.9 3.4 0.01 15.7 1.3 2.1 2 0 0 2 2 2 1 Double-strand recombination repair protein APG6_N PF17675.1 CCF73790.1 - 0.017 15.7 2.1 0.029 14.9 0.3 2.3 2 0 0 2 2 2 0 Apg6 coiled-coil region HEAT_EZ PF13513.6 CCF73790.1 - 0.031 14.8 0.1 0.28 11.7 0.0 2.6 2 0 0 2 2 2 0 HEAT-like repeat CENP-F_leu_zip PF10473.9 CCF73790.1 - 0.046 13.7 7.9 0.14 12.2 7.9 1.7 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GrpE PF01025.19 CCF73790.1 - 0.16 11.6 4.4 0.38 10.4 2.1 2.5 2 0 0 2 2 2 0 GrpE UPF0449 PF15136.6 CCF73790.1 - 0.57 10.7 3.8 1.8 9.0 3.8 1.8 1 0 0 1 1 1 0 Uncharacterised protein family UPF0449 THOC7 PF05615.13 CCF73790.1 - 1.5 9.1 9.0 0.064 13.5 0.5 2.9 4 0 0 4 4 4 0 Tho complex subunit 7 DUF724 PF05266.14 CCF73790.1 - 1.8 8.4 7.0 4.5 7.1 5.9 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF724) HR1 PF02185.16 CCF73790.1 - 8.4 6.6 16.2 41 4.4 0.1 4.0 4 0 0 4 4 4 0 Hr1 repeat RPAP3_C PF13877.6 CCF73791.1 - 0.049 14.2 0.5 27 5.4 0.0 3.6 3 1 0 3 3 3 0 Potential Monad-binding region of RPAP3 Inhibitor_I71 PF12628.7 CCF73792.1 - 0.0026 17.7 2.2 0.014 15.3 0.0 2.5 2 0 0 2 2 2 1 Falstatin, cysteine peptidase inhibitor FtsA PF14450.6 CCF73792.1 - 0.023 15.1 0.1 0.043 14.2 0.1 1.4 1 0 0 1 1 1 0 Cell division protein FtsA Pox_A3L PF05288.11 CCF73792.1 - 0.095 12.7 1.6 0.35 10.9 1.6 2.0 1 0 0 1 1 1 0 Poxvirus A3L Protein HeLo PF14479.6 CCF73792.1 - 0.15 11.9 6.4 0.26 11.1 6.4 1.4 1 0 0 1 1 1 0 Prion-inhibition and propagation DUF4407 PF14362.6 CCF73792.1 - 0.16 11.3 2.0 0.77 9.1 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) T3SSipB PF16535.5 CCF73792.1 - 0.16 12.4 6.1 0.096 13.2 1.2 2.3 2 0 0 2 2 2 0 Type III cell invasion protein SipB DUF1664 PF07889.12 CCF73792.1 - 0.3 11.1 10.9 0.93 9.5 2.9 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) MatP_C PF17414.2 CCF73792.1 - 0.67 10.2 7.9 0.16 12.2 3.4 2.3 2 0 0 2 2 2 0 MatP C-terminal ribbon-helix-helix domain Laminin_II PF06009.12 CCF73792.1 - 3.7 7.5 17.8 1.2 9.2 5.3 2.4 1 1 1 2 2 2 0 Laminin Domain II FapA PF03961.13 CCF73792.1 - 3.9 6.0 17.4 7.2 5.1 17.4 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A Jnk-SapK_ap_N PF09744.9 CCF73792.1 - 6.3 7.0 15.7 2.3 8.4 11.3 2.1 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Laminin_II PF06009.12 CCF73794.1 - 0.0005 20.1 8.7 0.00078 19.5 3.3 2.1 2 0 0 2 2 2 1 Laminin Domain II Baculo_F PF12259.8 CCF73794.1 - 0.0094 14.5 0.8 0.0099 14.5 0.8 1.2 1 0 0 1 1 1 1 Baculovirus F protein DUF4200 PF13863.6 CCF73794.1 - 0.0099 16.3 14.4 0.19 12.2 9.7 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4200) HNF-1_N PF04814.13 CCF73794.1 - 0.016 15.8 0.2 0.038 14.6 0.2 1.6 1 0 0 1 1 1 0 Hepatocyte nuclear factor 1 (HNF-1), N terminus FKBP_N PF01346.18 CCF73794.1 - 0.021 15.8 0.5 0.021 15.8 0.5 1.9 2 0 0 2 2 2 0 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase TMPIT PF07851.13 CCF73794.1 - 0.035 13.4 6.2 0.24 10.6 2.6 2.1 2 0 0 2 2 2 0 TMPIT-like protein APG6_N PF17675.1 CCF73794.1 - 0.043 14.3 12.6 0.13 12.7 8.9 2.2 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF948 PF06103.11 CCF73794.1 - 0.043 14.1 1.5 0.65 10.3 0.1 2.4 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Syntaxin_2 PF14523.6 CCF73794.1 - 0.05 14.0 6.6 0.17 12.3 5.0 2.3 2 0 0 2 2 2 0 Syntaxin-like protein DegS PF05384.11 CCF73794.1 - 0.085 12.3 14.9 0.039 13.4 1.6 2.8 2 1 1 3 3 3 0 Sensor protein DegS DUF1664 PF07889.12 CCF73794.1 - 0.17 12.0 6.5 0.2 11.7 2.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) Bul1_C PF04426.12 CCF73794.1 - 0.17 11.3 9.7 0.027 13.9 5.9 1.5 2 0 0 2 2 2 0 Bul1 C terminus STAT_alpha PF01017.20 CCF73794.1 - 0.2 11.6 6.2 0.15 11.9 3.3 1.9 2 0 0 2 2 2 0 STAT protein, all-alpha domain YabA PF06156.13 CCF73794.1 - 0.25 12.0 11.4 0.55 10.9 1.6 2.8 2 1 1 3 3 3 0 Initiation control protein YabA Snf7 PF03357.21 CCF73794.1 - 0.31 10.6 13.3 0.083 12.5 8.0 2.1 2 0 0 2 2 2 0 Snf7 FapA PF03961.13 CCF73794.1 - 0.37 9.3 9.4 0.17 10.5 5.5 1.9 2 0 0 2 2 2 0 Flagellar Assembly Protein A Occludin_ELL PF07303.13 CCF73794.1 - 0.41 11.4 7.6 0.22 12.3 4.3 2.1 2 1 0 2 2 2 0 Occludin homology domain PI3K_P85_iSH2 PF16454.5 CCF73794.1 - 0.5 10.0 16.2 1.9 8.1 1.3 3.0 2 1 1 3 3 3 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain ZapB PF06005.12 CCF73794.1 - 0.52 10.8 15.9 1.7 9.1 0.8 3.2 2 1 1 3 3 3 0 Cell division protein ZapB Exonuc_VII_L PF02601.15 CCF73794.1 - 0.57 9.7 5.8 1.4 8.4 6.0 1.6 1 1 0 1 1 1 0 Exonuclease VII, large subunit Rota_NSP4 PF01452.16 CCF73794.1 - 0.58 9.8 3.7 5.3 6.7 0.1 2.5 2 1 0 2 2 2 0 Rotavirus non structural protein CENP-H PF05837.12 CCF73794.1 - 0.58 10.6 7.4 0.44 11.0 3.6 2.2 2 0 0 2 2 2 0 Centromere protein H (CENP-H) DivIC PF04977.15 CCF73794.1 - 0.6 9.9 13.0 2.8 7.8 0.8 3.1 2 1 1 3 3 3 0 Septum formation initiator BLOC1_2 PF10046.9 CCF73794.1 - 0.72 10.2 11.3 2.8 8.3 2.3 3.0 2 1 1 3 3 3 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 TolA_bind_tri PF16331.5 CCF73794.1 - 0.75 9.9 10.4 2.9 8.1 0.6 2.8 2 1 0 2 2 2 0 TolA binding protein trimerisation DUF2203 PF09969.9 CCF73794.1 - 0.95 10.2 4.1 0.82 10.4 1.7 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2203) Prefoldin_2 PF01920.20 CCF73794.1 - 1 9.3 14.2 0.23 11.4 2.2 3.0 2 1 1 3 3 3 0 Prefoldin subunit FlxA PF14282.6 CCF73794.1 - 1.2 9.1 9.2 0.83 9.7 0.8 3.0 2 1 1 3 3 3 0 FlxA-like protein Med4 PF10018.9 CCF73794.1 - 1.3 8.7 11.1 0.9 9.2 6.8 2.6 2 1 0 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 GrpE PF01025.19 CCF73794.1 - 1.9 8.1 9.9 0.38 10.4 6.0 1.7 2 0 0 2 2 2 0 GrpE SlyX PF04102.12 CCF73794.1 - 2.1 9.1 7.0 7 7.3 0.4 3.2 2 1 1 3 3 3 0 SlyX CorA PF01544.18 CCF73794.1 - 2.3 7.5 9.2 0.56 9.5 5.5 1.7 2 0 0 2 2 2 0 CorA-like Mg2+ transporter protein V_ATPase_I PF01496.19 CCF73794.1 - 3.1 5.6 6.7 0.54 8.1 3.3 1.4 2 0 0 2 2 2 0 V-type ATPase 116kDa subunit family Orthopox_B11R PF07033.11 CCF73794.1 - 4.9 7.0 7.5 0.74 9.6 1.1 2.6 3 1 0 3 3 2 0 Orthopoxvirus B11R protein Rad10 PF03834.14 CCF73797.1 - 1.1e-32 112.4 0.1 3.4e-32 110.8 0.0 1.8 2 0 0 2 2 2 1 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) HHH_2 PF12826.7 CCF73797.1 - 8.5e-05 22.6 0.0 0.014 15.5 0.0 2.4 2 0 0 2 2 2 2 Helix-hairpin-helix motif HHH PF00633.23 CCF73797.1 - 0.0045 16.8 0.0 0.066 13.1 0.0 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 CCF73797.1 - 0.09 13.4 0.0 17 6.1 0.0 2.4 2 0 0 2 2 2 0 Helix-hairpin-helix domain MAGI_u5 PF16666.5 CCF73798.1 - 0.59 10.3 6.6 3.6 7.7 0.6 2.2 2 0 0 2 2 2 0 Unstructured region on MAGI DEAD_2 PF06733.15 CCF73799.1 - 0.11 12.1 0.4 0.11 12.1 0.4 2.0 2 1 1 3 3 3 0 DEAD_2 Peptidase_S26 PF10502.9 CCF73801.1 - 6.2e-07 29.3 0.0 2.6e-06 27.3 0.0 1.8 1 1 1 2 2 2 1 Signal peptidase, peptidase S26 Peptidase_S24 PF00717.23 CCF73801.1 - 8.1e-05 22.5 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 Peptidase S24-like ClpS PF02617.17 CCF73802.1 - 1.7e-05 24.5 0.1 3.7e-05 23.4 0.1 1.5 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS Big_2 PF02368.18 CCF73802.1 - 0.003 17.4 1.0 0.12 12.3 1.0 2.2 1 1 0 1 1 1 1 Bacterial Ig-like domain (group 2) AP2 PF00847.20 CCF73803.1 - 1.1e-08 35.1 5.1 2.2e-08 34.2 5.1 1.5 1 0 0 1 1 1 1 AP2 domain LAS2 PF15792.5 CCF73803.1 - 0.015 15.8 0.1 0.071 13.6 0.1 2.2 1 1 1 2 2 2 0 Lung adenoma susceptibility protein 2 MoaF_C PF17409.2 CCF73804.1 - 0.13 11.9 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 MoaF C-terminal domain TPR_2 PF07719.17 CCF73805.1 - 3.1e-07 30.0 2.4 0.0015 18.5 1.2 2.9 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73805.1 - 2e-06 27.3 4.6 0.0002 21.1 1.5 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat DnaJ PF00226.31 CCF73805.1 - 0.00064 19.8 0.2 0.015 15.4 0.0 2.7 2 0 0 2 2 2 1 DnaJ domain TPR_11 PF13414.6 CCF73805.1 - 0.0012 18.5 1.4 0.0027 17.4 1.4 1.6 1 0 0 1 1 1 1 TPR repeat TPR_12 PF13424.6 CCF73805.1 - 0.002 18.4 1.0 0.17 12.2 0.1 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_7 PF13176.6 CCF73805.1 - 0.0033 17.3 2.2 0.38 10.9 0.2 3.3 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_3 PF07720.12 CCF73805.1 - 0.0099 15.9 1.3 0.0099 15.9 1.3 2.5 3 0 0 3 3 3 1 Tetratricopeptide repeat MIT PF04212.18 CCF73805.1 - 0.013 15.5 0.7 0.073 13.1 0.4 2.5 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain TPR_16 PF13432.6 CCF73805.1 - 0.071 13.8 0.1 0.3 11.8 0.2 1.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 CCF73805.1 - 0.075 13.7 0.4 3.9 8.3 0.2 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 CCF73805.1 - 0.17 12.2 1.9 3.2 8.2 0.9 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF641 PF04859.12 CCF73805.1 - 0.72 10.2 5.0 8.1 6.8 4.1 2.5 2 0 0 2 2 2 0 Plant protein of unknown function (DUF641) CTNNBL PF08216.11 CCF73806.1 - 4.3e-25 87.9 0.2 1.2e-24 86.5 0.2 1.8 1 0 0 1 1 1 1 Catenin-beta-like, Arm-motif containing nuclear UNC45-central PF11701.8 CCF73806.1 - 0.028 14.4 3.3 0.042 13.8 0.4 2.7 1 1 2 3 3 3 0 Myosin-binding striated muscle assembly central OAS1_C PF10421.9 CCF73806.1 - 0.046 13.2 0.1 0.66 9.4 0.0 2.3 2 0 0 2 2 2 0 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus Ric8 PF10165.9 CCF73806.1 - 0.074 12.1 2.2 0.071 12.1 0.3 2.1 2 1 0 2 2 2 0 Guanine nucleotide exchange factor synembryn VHS PF00790.19 CCF73806.1 - 0.28 11.0 2.5 7.6 6.4 0.0 3.9 4 1 1 5 5 5 0 VHS domain YjcQ PF09639.10 CCF73807.1 - 0.024 14.8 1.9 0.072 13.3 0.0 2.7 3 0 0 3 3 3 0 YjcQ protein Nic96 PF04097.14 CCF73807.1 - 0.025 13.1 0.1 0.42 9.0 0.0 2.2 2 0 0 2 2 2 0 Nup93/Nic96 NAT PF04768.13 CCF73807.1 - 0.071 12.8 0.0 0.23 11.1 0.0 1.8 1 0 0 1 1 1 0 NAT, N-acetyltransferase, of N-acetylglutamate synthase Rep_fac-A_C PF08646.10 CCF73808.1 - 1.9e-18 66.6 0.6 4.2e-18 65.5 0.1 1.8 2 0 0 2 2 2 1 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 CCF73808.1 - 2.1e-13 50.0 3.3 7e-11 41.9 0.5 2.7 3 0 0 3 3 3 2 Replication protein A OB domain tRNA_anti-codon PF01336.25 CCF73808.1 - 3.3e-09 36.6 0.4 6.2e-06 26.1 0.0 2.9 3 0 0 3 3 3 2 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 CCF73808.1 - 0.00046 20.0 1.1 0.028 14.1 1.1 2.8 2 1 0 2 2 2 1 Cell division control protein 24, OB domain 3 DUF2318 PF10080.9 CCF73808.1 - 0.0036 17.4 0.1 0.01 15.9 0.1 1.8 1 0 0 1 1 1 1 Predicted membrane protein (DUF2318) Zn_Tnp_IS1595 PF12760.7 CCF73808.1 - 0.034 14.1 1.1 3.3 7.8 1.5 2.6 1 1 1 2 2 2 0 Transposase zinc-ribbon domain DZR PF12773.7 CCF73808.1 - 0.051 13.6 0.4 0.11 12.6 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 CCF73808.1 - 0.092 12.8 0.8 0.22 11.6 0.8 1.6 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_9 PF14369.6 CCF73808.1 - 2.1 8.7 4.0 2.1 8.7 1.7 2.2 2 1 0 2 2 2 0 zinc-ribbon Pro_isomerase PF00160.21 CCF73809.1 - 9.5e-38 129.9 0.0 1.1e-37 129.7 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ATP-synt_F PF01990.17 CCF73810.1 - 1.5e-26 92.5 0.1 1.8e-26 92.3 0.1 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit DHHC PF01529.20 CCF73811.1 - 1.7e-33 115.6 10.9 1.7e-33 115.6 10.9 2.3 2 0 0 2 2 2 2 DHHC palmitoyltransferase La PF05383.17 CCF73813.1 - 2.2e-09 37.2 1.3 1.1e-08 35.0 0.9 2.4 2 0 0 2 2 2 1 La domain DUF3223 PF11523.8 CCF73813.1 - 9.5e-09 36.0 0.3 2.5e-08 34.7 0.2 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3223) Tubulin PF00091.25 CCF73814.1 - 3e-34 119.0 7.5 4.8e-27 95.4 0.7 2.5 1 1 1 2 2 2 2 Tubulin/FtsZ family, GTPase domain Tubulin_2 PF13809.6 CCF73814.1 - 0.028 13.6 0.0 0.056 12.6 0.0 1.5 1 0 0 1 1 1 0 Tubulin like CDT1 PF08839.11 CCF73817.1 - 1.5e-07 31.9 0.0 2.6e-07 31.1 0.0 1.3 1 0 0 1 1 1 1 DNA replication factor CDT1 like LisH PF08513.11 CCF73818.1 - 1.3e-10 40.9 0.2 4.3e-10 39.2 0.2 2.0 1 0 0 1 1 1 1 LisH WD40 PF00400.32 CCF73818.1 - 1.8e-05 25.4 3.5 0.17 12.8 0.1 5.3 5 0 0 5 5 5 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF73818.1 - 0.0011 19.2 0.0 0.24 11.7 0.0 3.4 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain DUF2251 PF10008.9 CCF73818.1 - 0.064 13.4 3.3 2.5 8.2 0.1 3.8 3 1 2 5 5 5 0 Uncharacterized protein conserved in bacteria (DUF2251) Na_H_Exchanger PF00999.21 CCF73819.1 - 3e-28 98.7 40.6 4.2e-28 98.2 40.6 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family tRNA-synt_His PF13393.6 CCF73820.1 - 8.5e-29 100.8 0.0 1.4e-28 100.1 0.0 1.3 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 CCF73820.1 - 3.5e-09 36.9 0.0 4.4e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Ubiq-assoc PF09145.10 CCF73820.1 - 0.51 10.4 2.8 0.47 10.5 0.3 2.4 2 1 0 2 2 2 0 Ubiquitin-associated ThiF PF00899.21 CCF73821.1 - 4.8e-41 140.7 0.2 6.4e-41 140.3 0.2 1.1 1 0 0 1 1 1 1 ThiF family UDPG_MGDP_dh_N PF03721.14 CCF73821.1 - 0.0026 17.4 0.4 0.0045 16.6 0.4 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2-Hacid_dh_C PF02826.19 CCF73821.1 - 0.0052 16.2 0.1 0.0086 15.4 0.1 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Erf4 PF10256.9 CCF73822.1 - 0.09 12.9 2.6 0.1 12.7 0.3 2.3 2 0 0 2 2 2 0 Golgin subfamily A member 7/ERF4 family Iso_dh PF00180.20 CCF73824.1 - 4.4e-35 121.5 0.0 5.9e-35 121.0 0.0 1.2 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Ribosomal_L28e PF01778.17 CCF73825.1 - 0.034 14.9 3.2 0.073 13.8 3.2 1.5 1 0 0 1 1 1 0 Ribosomal L28e protein family DEAD PF00270.29 CCF73826.1 - 1.2e-31 109.8 0.0 2e-31 109.1 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73826.1 - 3.5e-23 82.1 0.1 1.2e-22 80.3 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 CCF73826.1 - 1.1e-15 57.6 0.0 2.3e-15 56.6 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) ResIII PF04851.15 CCF73826.1 - 1.2e-05 25.4 1.7 4.7e-05 23.5 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit GIIM PF08388.11 CCF73826.1 - 0.023 14.7 0.1 0.26 11.4 0.0 2.8 3 0 0 3 3 3 0 Group II intron, maturase-specific domain AAA_22 PF13401.6 CCF73826.1 - 0.052 13.8 0.6 0.67 10.2 0.6 2.6 1 1 0 1 1 1 0 AAA domain Peptidase_M41 PF01434.18 CCF73827.1 - 2.2e-48 164.6 0.0 4.3e-48 163.7 0.0 1.5 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 CCF73827.1 - 2.8e-42 144.3 0.0 5.7e-42 143.3 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF73827.1 - 1e-12 47.6 0.7 2.5e-12 46.4 0.7 1.7 1 0 0 1 1 1 1 AAA+ lid domain FtsH_ext PF06480.15 CCF73827.1 - 4.5e-07 30.2 0.1 2e-06 28.1 0.0 2.2 2 0 0 2 2 2 1 FtsH Extracellular AAA_22 PF13401.6 CCF73827.1 - 7.1e-05 23.1 0.0 0.017 15.4 0.0 2.7 3 0 0 3 3 3 1 AAA domain RuvB_N PF05496.12 CCF73827.1 - 0.0002 21.2 0.0 0.0017 18.1 0.0 2.3 1 1 1 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain TIP49 PF06068.13 CCF73827.1 - 0.0012 18.1 0.0 0.0022 17.3 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain Mg_chelatase PF01078.21 CCF73827.1 - 0.0015 18.0 0.4 0.097 12.0 0.2 2.9 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CCF73827.1 - 0.0016 18.4 0.1 0.009 16.0 0.0 2.5 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 CCF73827.1 - 0.0088 16.2 0.0 0.028 14.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 CCF73827.1 - 0.0097 15.7 0.0 0.024 14.4 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein DUF4471 PF14740.6 CCF73827.1 - 0.012 14.8 0.1 0.02 14.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4471) AAA_33 PF13671.6 CCF73827.1 - 0.014 15.5 0.0 0.028 14.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CCF73827.1 - 0.021 15.2 0.2 0.23 11.8 0.1 2.3 1 1 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 CCF73827.1 - 0.088 13.4 0.0 0.24 12.0 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 CCF73827.1 - 0.13 12.7 0.0 0.38 11.2 0.0 1.8 1 0 0 1 1 1 0 AAA domain SUI1 PF01253.22 CCF73828.1 - 5.2e-19 68.6 0.4 7.6e-19 68.0 0.4 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 zf-C2H2_3 PF13878.6 CCF73828.1 - 0.4 10.5 1.7 0.95 9.3 1.7 1.6 1 0 0 1 1 1 0 zinc-finger of acetyl-transferase ESCO DDE_5 PF13546.6 CCF73829.1 - 0.012 14.9 0.1 0.016 14.5 0.1 1.1 1 0 0 1 1 1 0 DDE superfamily endonuclease AT_hook PF02178.19 CCF73829.1 - 0.12 12.3 7.3 0.31 11.0 7.3 1.7 1 0 0 1 1 1 0 AT hook motif SRP54 PF00448.22 CCF73832.1 - 1.6e-57 194.3 0.0 2.4e-57 193.7 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP-alpha_N PF04086.13 CCF73832.1 - 1.5e-08 34.9 18.0 1.3e-05 25.3 6.5 2.2 1 1 1 2 2 2 2 Signal recognition particle, alpha subunit, N-terminal SRP54_N PF02881.19 CCF73832.1 - 3.4e-07 30.4 0.2 1.5e-06 28.4 0.2 2.2 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 CCF73832.1 - 6.8e-07 29.4 0.5 1e-05 25.6 0.5 2.6 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 CCF73832.1 - 6.3e-05 22.1 0.0 0.00018 20.6 0.0 1.7 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_24 PF13479.6 CCF73832.1 - 0.00036 20.3 0.4 0.008 15.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_31 PF13614.6 CCF73832.1 - 0.00037 20.4 5.8 0.009 15.9 0.1 3.7 3 1 1 4 4 4 1 AAA domain AAA_30 PF13604.6 CCF73832.1 - 0.00041 20.1 0.0 0.00075 19.3 0.0 1.4 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 CCF73832.1 - 0.00058 19.8 1.2 0.031 14.2 0.1 2.9 3 1 1 4 4 4 1 NTPase Fer4_NifH PF00142.18 CCF73832.1 - 0.0016 17.9 0.1 0.0039 16.7 0.1 1.6 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_22 PF13401.6 CCF73832.1 - 0.011 16.0 0.0 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 CCF73832.1 - 0.028 14.8 0.0 0.063 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 CCF73832.1 - 0.053 13.9 0.1 0.37 11.2 0.0 2.5 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF73832.1 - 0.14 12.5 0.0 0.39 11.1 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain NDK PF00334.19 CCF73833.1 - 1.5e-52 177.2 0.0 1.8e-52 177.0 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase DUF501 PF04417.12 CCF73834.1 - 8.9e-15 54.7 0.0 4.7e-06 26.5 0.0 2.8 3 0 0 3 3 3 2 Protein of unknown function (DUF501) Orthopox_F6 PF06601.12 CCF73834.1 - 0.0086 16.2 1.4 0.072 13.3 0.1 2.5 2 0 0 2 2 2 1 Orthopoxvirus F6 protein Clat_adaptor_s PF01217.20 CCF73836.1 - 4.9e-42 143.2 2.2 5.3e-42 143.1 2.2 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain OGG_N PF07934.12 CCF73837.1 - 2.6e-17 63.0 0.0 4.2e-17 62.4 0.0 1.3 1 0 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 CCF73837.1 - 3.3e-12 46.8 0.0 4.7e-12 46.3 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 CCF73837.1 - 0.00052 19.7 0.0 0.0012 18.6 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_5 PF14520.6 CCF73837.1 - 0.046 14.3 0.0 0.24 12.0 0.0 2.2 3 0 0 3 3 3 0 Helix-hairpin-helix domain SKA2 PF16740.5 CCF73837.1 - 0.067 13.0 0.0 0.2 11.4 0.0 1.7 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 DUF4874 PF16173.5 CCF73837.1 - 0.12 12.1 0.0 0.39 10.4 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4874) CTP_transf_like PF01467.26 CCF73838.1 - 1.9e-38 131.9 0.0 4e-21 75.7 0.0 2.3 2 0 0 2 2 2 2 Cytidylyltransferase-like FAD_syn PF06574.12 CCF73838.1 - 0.00065 19.6 0.2 0.52 10.2 0.0 2.6 2 1 0 2 2 2 2 FAD synthetase tRNA-synt_2c PF01411.19 CCF73840.1 - 1e-175 585.4 0.0 1.3e-175 585.1 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 CCF73840.1 - 9.7e-14 51.2 0.2 2.5e-13 49.9 0.2 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain RL10P_insert PF17777.1 CCF73841.1 - 8.1e-23 80.2 0.0 2.1e-22 78.9 0.0 1.7 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 CCF73841.1 - 1.6e-14 53.8 0.1 2.7e-14 53.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L10 zf-C3HC4_3 PF13920.6 CCF73842.1 - 8.9e-12 44.7 10.7 1.8e-11 43.7 10.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF73842.1 - 1.7e-05 24.6 13.8 4.4e-05 23.3 13.8 1.7 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 CCF73842.1 - 2.3e-05 24.6 13.8 7e-05 23.1 13.8 1.9 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 CCF73842.1 - 0.00047 20.0 14.6 0.0012 18.6 14.6 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF73842.1 - 0.004 17.0 13.3 0.0089 15.8 13.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 CCF73842.1 - 0.14 12.0 7.2 1.9 8.4 6.5 2.5 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-RING_4 PF14570.6 CCF73842.1 - 0.14 11.9 9.0 0.33 10.8 9.0 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain ATP_bind_1 PF03029.17 CCF73843.1 - 3.4e-59 200.6 0.0 3.9e-59 200.4 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein Fer4_NifH PF00142.18 CCF73843.1 - 0.00014 21.4 0.0 0.29 10.5 0.0 2.1 2 0 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLP1_P PF16575.5 CCF73843.1 - 0.00019 21.3 0.0 0.00035 20.4 0.0 1.4 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_5 PF07728.14 CCF73843.1 - 0.0004 20.4 0.0 0.00062 19.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) CbiA PF01656.23 CCF73843.1 - 0.0047 17.0 0.0 0.0062 16.6 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NACHT PF05729.12 CCF73843.1 - 0.0095 15.9 0.6 0.44 10.4 0.0 2.2 2 0 0 2 2 2 1 NACHT domain Sigma54_activ_2 PF14532.6 CCF73843.1 - 0.012 15.8 0.1 0.26 11.4 0.1 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_33 PF13671.6 CCF73843.1 - 0.015 15.5 0.0 0.023 14.8 0.0 1.3 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 CCF73843.1 - 0.021 14.9 0.0 0.32 11.1 0.0 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_17 PF13207.6 CCF73843.1 - 0.024 15.1 0.0 0.042 14.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CCF73843.1 - 0.026 14.2 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CCF73843.1 - 0.037 14.6 0.0 0.064 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CCF73843.1 - 0.038 14.2 0.1 0.23 11.7 0.0 2.0 2 0 0 2 2 2 0 AAA domain KTI12 PF08433.10 CCF73843.1 - 0.066 12.7 0.0 0.096 12.1 0.0 1.2 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_24 PF13479.6 CCF73843.1 - 0.072 12.8 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 CCF73843.1 - 0.099 11.6 0.0 0.15 11.0 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB RNA_helicase PF00910.22 CCF73843.1 - 0.1 13.0 0.0 0.21 12.0 0.0 1.5 1 0 0 1 1 1 0 RNA helicase NTPase_1 PF03266.15 CCF73843.1 - 0.18 11.7 0.0 0.45 10.4 0.0 1.6 1 0 0 1 1 1 0 NTPase FTHFS PF01268.19 CCF73843.1 - 0.24 9.6 0.0 0.33 9.1 0.0 1.1 1 0 0 1 1 1 0 Formate--tetrahydrofolate ligase SNAPc_SNAP43 PF09808.9 CCF73844.1 - 9.6e-10 38.7 0.1 1.2e-09 38.3 0.1 1.1 1 0 0 1 1 1 1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 ThiF PF00899.21 CCF73845.1 - 5.1e-52 176.7 0.2 1e-51 175.7 0.2 1.3 1 1 0 1 1 1 1 ThiF family Rhodanese PF00581.20 CCF73845.1 - 8.6e-09 35.9 0.9 1.5e-08 35.1 0.1 1.9 2 0 0 2 2 2 1 Rhodanese-like domain Sacchrp_dh_NADP PF03435.18 CCF73845.1 - 0.0045 17.2 4.0 0.024 14.9 4.0 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 CCF73845.1 - 0.011 16.2 0.0 0.025 15.0 0.0 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding Shikimate_DH PF01488.20 CCF73845.1 - 0.015 15.3 0.3 0.48 10.5 0.0 2.4 1 1 1 2 2 2 0 Shikimate / quinate 5-dehydrogenase AXH PF08517.12 CCF73846.1 - 0.07 13.7 0.1 0.21 12.2 0.1 1.7 1 0 0 1 1 1 0 Ataxin-1 and HBP1 module (AXH) HA2 PF04408.23 CCF73847.1 - 1.8e-19 70.0 0.0 3.8e-19 69.0 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 CCF73847.1 - 1.1e-15 57.8 0.0 2.4e-15 56.7 0.0 1.6 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 CCF73847.1 - 4.9e-13 49.4 0.0 1.3e-12 48.0 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF73847.1 - 3.6e-07 30.1 0.0 7.8e-07 29.0 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 CCF73847.1 - 3.9e-05 23.9 0.0 0.00012 22.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 CCF73847.1 - 0.0014 18.6 0.0 0.087 12.8 0.0 2.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 CCF73847.1 - 0.0062 16.9 0.0 0.014 15.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 CCF73847.1 - 0.012 15.3 0.0 3.4 7.4 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein SRP54 PF00448.22 CCF73847.1 - 0.039 13.6 0.0 0.27 10.8 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_7 PF12775.7 CCF73847.1 - 0.058 12.9 0.0 0.45 10.0 0.0 2.1 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 CCF73847.1 - 0.074 12.6 0.0 0.15 11.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CCF73847.1 - 0.079 12.7 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 CCF73847.1 - 0.15 11.1 0.0 0.32 10.0 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.6 CCF73847.1 - 0.15 11.8 0.0 0.6 9.9 0.0 2.0 2 0 0 2 2 2 0 P-loop containing region of AAA domain ABC_tran PF00005.27 CCF73847.1 - 0.16 12.5 0.0 1.9 9.0 0.0 2.7 4 0 0 4 4 4 0 ABC transporter Helicase_RecD PF05127.14 CCF73847.1 - 0.17 11.7 0.0 0.3 10.9 0.0 1.4 1 0 0 1 1 1 0 Helicase DUF4231 PF14015.6 CCF73849.1 - 0.88 10.1 5.5 4.3 7.9 1.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) DHHC PF01529.20 CCF73849.1 - 2.1 8.5 20.4 2.3 8.3 10.8 3.1 3 0 0 3 3 3 0 DHHC palmitoyltransferase Methyltransf_31 PF13847.6 CCF73851.1 - 3.5e-18 65.8 0.0 4.2e-18 65.6 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF73851.1 - 5.8e-13 49.4 0.0 8.5e-13 48.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF73851.1 - 6.6e-12 45.9 0.0 9.5e-12 45.4 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF73851.1 - 1.9e-09 37.5 0.0 2.6e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF73851.1 - 8.7e-09 36.0 0.0 1.3e-08 35.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 CCF73851.1 - 9e-06 25.3 0.0 1.4e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 CCF73851.1 - 1.7e-05 24.4 0.0 2.5e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Pox_MCEL PF03291.16 CCF73851.1 - 0.00034 19.8 0.1 0.00054 19.2 0.1 1.2 1 0 0 1 1 1 1 mRNA capping enzyme MetW PF07021.12 CCF73851.1 - 0.0029 17.2 0.0 0.0039 16.8 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.14 CCF73851.1 - 0.0042 16.5 0.1 0.0059 16.0 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_9 PF08003.11 CCF73851.1 - 0.011 14.7 0.0 0.016 14.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) Methyltransf_4 PF02390.17 CCF73851.1 - 0.012 15.0 0.0 0.69 9.3 0.1 2.4 1 1 0 2 2 2 0 Putative methyltransferase AviRa PF11599.8 CCF73851.1 - 0.015 14.7 0.0 0.023 14.2 0.0 1.2 1 0 0 1 1 1 0 RRNA methyltransferase AviRa CMAS PF02353.20 CCF73851.1 - 0.017 14.4 0.0 0.021 14.1 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 CCF73851.1 - 0.017 15.1 0.0 0.022 14.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ubie_methyltran PF01209.18 CCF73851.1 - 0.021 14.1 0.0 0.027 13.8 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family CheR PF01739.18 CCF73851.1 - 0.088 12.3 0.0 4.5 6.7 0.0 2.2 1 1 1 2 2 2 0 CheR methyltransferase, SAM binding domain AdoMet_MTase PF07757.13 CCF73851.1 - 0.1 13.0 0.0 0.15 12.4 0.0 1.3 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Cons_hypoth95 PF03602.15 CCF73851.1 - 0.11 12.2 0.0 0.15 11.7 0.0 1.2 1 0 0 1 1 1 0 Conserved hypothetical protein 95 MtN3_slv PF03083.16 CCF73852.1 - 6.3e-30 103.1 12.7 5.7e-16 58.3 3.3 2.6 2 1 0 2 2 2 2 Sugar efflux transporter for intercellular exchange PQ-loop PF04193.14 CCF73852.1 - 0.00028 20.6 3.0 0.00028 20.6 3.0 3.5 3 1 1 4 4 4 1 PQ loop repeat CLZ PF16526.5 CCF73852.1 - 0.12 12.7 0.2 0.35 11.3 0.1 1.8 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ERM PF00769.19 CCF73852.1 - 0.12 12.2 1.3 0.18 11.6 1.3 1.1 1 0 0 1 1 1 0 Ezrin/radixin/moesin family FliD_N PF02465.18 CCF73852.1 - 0.82 10.4 4.6 0.59 10.9 2.5 1.8 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 N-terminus LAB_N PF07578.11 CCF73852.1 - 3.4 7.8 9.4 1.8 8.7 0.3 3.3 3 0 0 3 3 3 0 Lipid A Biosynthesis N-terminal domain CENP-B_N PF04218.13 CCF73853.1 - 0.21 11.2 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain AP2 PF00847.20 CCF73854.1 - 0.00025 21.2 0.6 0.0005 20.2 0.6 1.6 1 0 0 1 1 1 1 AP2 domain Cnd2 PF05786.14 CCF73855.1 - 2.9e-19 69.2 14.5 2.7e-18 66.1 3.3 4.3 2 2 0 3 3 3 2 Condensin complex subunit 2 CNDH2_N PF06278.11 CCF73855.1 - 0.0083 16.3 0.8 0.0083 16.3 0.8 2.3 2 0 0 2 2 2 1 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal Pyr_redox_2 PF07992.14 CCF73856.1 - 6.1e-51 173.4 0.1 7.9e-51 173.0 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 CCF73856.1 - 1.2e-24 86.7 0.0 5.5e-24 84.6 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 CCF73856.1 - 2.7e-16 59.9 0.8 1e-11 45.2 0.1 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CCF73856.1 - 1.7e-11 43.9 0.4 5.5e-07 29.1 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 CCF73856.1 - 3.9e-08 32.8 0.2 4e-05 23.0 0.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_2 PF00890.24 CCF73856.1 - 4.7e-08 32.5 1.2 2e-06 27.2 0.9 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 CCF73856.1 - 8.9e-06 25.3 0.2 1.4e-05 24.7 0.2 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase HI0933_like PF03486.14 CCF73856.1 - 1.2e-05 24.2 0.1 2.1e-05 23.4 0.1 1.4 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 CCF73856.1 - 0.00017 20.8 0.3 0.00027 20.2 0.3 1.3 1 0 0 1 1 1 1 Glucose inhibited division protein A DAO PF01266.24 CCF73856.1 - 0.00033 20.4 0.8 0.00065 19.4 0.2 1.8 2 1 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 CCF73856.1 - 0.00062 19.1 0.1 0.0012 18.1 0.1 1.5 1 0 0 1 1 1 1 Thi4 family NAD_binding_8 PF13450.6 CCF73856.1 - 0.0011 19.2 0.8 0.0011 19.2 0.8 2.8 3 0 0 3 3 2 1 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 CCF73856.1 - 0.0055 17.1 0.1 1.4 9.4 0.0 3.0 3 1 0 3 3 3 1 Putative NAD(P)-binding K_oxygenase PF13434.6 CCF73856.1 - 0.024 13.8 0.0 0.093 11.9 0.0 1.8 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) XdhC_C PF13478.6 CCF73856.1 - 0.039 14.5 0.2 14 6.2 0.0 2.3 2 0 0 2 2 2 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 CCF73856.1 - 0.046 13.0 0.0 0.046 13.0 0.0 1.5 2 0 0 2 2 2 0 FAD binding domain LMF1 PF06762.14 CCF73857.1 - 9.2e-54 183.2 10.3 9.2e-54 183.2 10.3 1.7 1 1 0 1 1 1 1 Lipase maturation factor PL48 PF15903.5 CCF73857.1 - 0.036 13.1 0.0 0.055 12.4 0.0 1.2 1 0 0 1 1 1 0 Filopodia upregulated, FAM65 Sec1 PF00995.23 CCF73858.1 - 5.4e-77 260.3 7.6 6.6e-77 260.1 7.6 1.0 1 0 0 1 1 1 1 Sec1 family Ribosomal_L18p PF00861.22 CCF73860.1 - 2e-13 50.7 1.7 7.8e-11 42.4 1.7 2.1 1 1 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YcbB PF08664.10 CCF73860.1 - 0.092 12.8 0.0 0.13 12.3 0.0 1.2 1 0 0 1 1 1 0 YcbB domain EPOP PF15223.6 CCF73861.1 - 0.021 14.2 2.5 0.032 13.6 2.5 1.3 1 0 0 1 1 1 0 Elongin BC and Polycomb repressive complex 2-associated protein Alph_Pro_TM PF09608.10 CCF73861.1 - 0.42 10.4 3.8 0.39 10.5 1.7 1.9 1 1 1 2 2 2 0 Putative transmembrane protein (Alph_Pro_TM) Glyco_transf_88 PF16849.5 CCF73861.1 - 0.9 8.4 7.1 1.4 7.8 7.1 1.2 1 0 0 1 1 1 0 Glycosyltransferase family 88 HoxA13_N PF12284.8 CCF73863.1 - 0.071 13.7 0.0 0.1 13.2 0.0 1.2 1 0 0 1 1 1 0 Hox protein A13 N terminal AP2 PF00847.20 CCF73864.1 - 7.3e-16 58.1 0.5 1.2e-15 57.4 0.5 1.3 1 0 0 1 1 1 1 AP2 domain ACDC PF14733.6 CCF73864.1 - 0.003 17.8 0.0 0.0062 16.8 0.0 1.6 1 0 0 1 1 1 1 AP2-coincident C-terminal zf-RING_2 PF13639.6 CCF73865.1 - 8.6e-10 38.8 14.7 2.3e-09 37.4 14.7 1.8 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 CCF73865.1 - 0.0001 22.0 11.7 0.00032 20.4 11.7 1.9 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 CCF73865.1 - 0.00011 22.4 14.9 0.0004 20.6 14.9 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 CCF73865.1 - 0.00018 21.3 13.6 0.00036 20.3 13.6 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF73865.1 - 0.00025 20.9 12.9 0.00051 19.9 12.9 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 CCF73865.1 - 0.00044 20.0 13.2 0.00091 19.0 13.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF73865.1 - 0.0058 16.6 9.1 0.014 15.4 9.1 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 CCF73865.1 - 0.027 14.3 14.7 0.053 13.4 14.7 1.5 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF1062 PF06353.12 CCF73865.1 - 0.03 15.2 0.0 0.055 14.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1062) Zn_ribbon_17 PF17120.5 CCF73865.1 - 0.033 13.8 11.6 0.069 12.8 11.6 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 CCF73865.1 - 0.67 9.8 13.1 0.8 9.6 11.3 2.0 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_4 PF15227.6 CCF73865.1 - 1.8 8.8 11.3 6.6 7.0 11.3 2.1 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING DUF2053 PF09767.9 CCF73866.1 - 1e-11 45.3 2.8 8.2e-08 32.6 0.1 2.4 1 1 1 2 2 2 2 Predicted membrane protein (DUF2053) CRAL_TRIO_2 PF13716.6 CCF73867.1 - 6.1e-12 45.9 0.5 1e-11 45.1 0.5 1.4 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain RhoGAP PF00620.27 CCF73867.1 - 2e-05 24.5 0.0 3.3e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 RhoGAP domain AP2 PF00847.20 CCF73870.1 - 4.3e-10 39.7 2.0 8.5e-10 38.7 2.0 1.4 1 0 0 1 1 1 1 AP2 domain Phage_spike PF18715.1 CCF73870.1 - 0.99 9.5 4.7 1.9 8.6 4.7 1.5 1 0 0 1 1 1 0 Phage spike trimer CKS PF01111.19 CCF73872.1 - 1.1e-21 76.8 2.1 2.1e-21 76.0 2.1 1.5 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit UBX PF00789.20 CCF73872.1 - 0.1 12.8 0.0 0.21 11.8 0.0 1.5 1 0 0 1 1 1 0 UBX domain RRM_1 PF00076.22 CCF73873.1 - 3.5e-18 65.2 0.0 5.8e-18 64.5 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF73873.1 - 0.0012 18.5 0.0 0.0014 18.2 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 CCF73873.1 - 0.0042 17.0 0.0 0.007 16.3 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RL PF17797.1 CCF73873.1 - 0.0094 15.9 0.0 0.018 15.0 0.0 1.4 1 0 0 1 1 1 1 RL domain RRM_7 PF16367.5 CCF73873.1 - 0.016 15.3 0.0 0.07 13.2 0.0 1.9 1 1 0 1 1 1 0 RNA recognition motif Flavodoxin_1 PF00258.25 CCF73874.1 - 5.1e-27 94.8 0.0 7.8e-27 94.2 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin NAD_binding_1 PF00175.21 CCF73874.1 - 5e-17 62.5 0.0 9.8e-17 61.6 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_1 PF00667.20 CCF73874.1 - 3e-12 46.6 0.2 5.6e-12 45.7 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain zf-C2H2_jaz PF12171.8 CCF73877.1 - 3e-09 36.9 1.4 9e-09 35.4 1.4 1.9 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-U1 PF06220.12 CCF73877.1 - 0.00096 18.9 0.8 0.00096 18.9 0.8 1.8 2 0 0 2 2 2 1 U1 zinc finger zf-C2H2_4 PF13894.6 CCF73877.1 - 0.01 16.6 0.2 0.01 16.6 0.2 2.6 3 0 0 3 3 3 0 C2H2-type zinc finger zf-C2H2 PF00096.26 CCF73877.1 - 0.02 15.3 0.8 0.02 15.3 0.8 1.9 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-met PF12874.7 CCF73877.1 - 0.07 13.5 0.5 0.16 12.4 0.5 1.7 1 0 0 1 1 1 0 Zinc-finger of C2H2 type Phage_pRha PF09669.10 CCF73877.1 - 0.13 12.8 0.1 0.17 12.5 0.1 1.2 1 0 0 1 1 1 0 Phage regulatory protein Rha (Phage_pRha) zf-CCCH PF00642.24 CCF73878.1 - 4.4e-05 23.3 2.7 4.4e-05 23.3 2.7 3.9 3 1 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 CCF73878.1 - 0.00074 19.3 4.2 0.00074 19.3 4.2 4.3 4 1 0 4 4 4 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 CCF73878.1 - 0.014 15.6 16.2 0.019 15.2 10.0 2.4 1 1 1 2 2 2 0 Zinc-finger containing family zf_CCCH_4 PF18345.1 CCF73878.1 - 0.76 9.9 23.6 0.086 12.9 6.9 4.3 3 2 0 3 3 3 0 Zinc finger domain DUF3139 PF11337.8 CCF73879.1 - 0.17 12.5 0.2 0.17 12.5 0.2 5.7 7 1 0 7 7 7 0 Protein of unknown function (DUF3139) Wzy_C PF04932.15 CCF73879.1 - 1.8 8.2 6.6 5.9 6.5 0.0 3.1 4 0 0 4 4 4 0 O-Antigen ligase Macoilin PF09726.9 CCF73879.1 - 9.6 4.6 13.8 17 3.8 13.8 1.3 1 0 0 1 1 1 0 Macoilin family Fumble PF03630.14 CCF73880.1 - 2.2e-39 135.6 5.6 1.9e-30 106.2 1.0 2.1 2 0 0 2 2 2 2 Fumble TFIID_20kDa PF03847.13 CCF73881.1 - 0.026 15.0 0.0 0.043 14.3 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A CBFD_NFYB_HMF PF00808.23 CCF73881.1 - 0.055 13.7 0.0 0.19 12.1 0.0 1.9 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Rad51 PF08423.11 CCF73884.1 - 3.1e-16 59.4 1.5 2e-09 37.1 0.1 2.1 1 1 1 2 2 2 2 Rad51 DnaB_C PF03796.15 CCF73884.1 - 1.1e-05 24.9 0.8 0.0072 15.7 0.4 2.1 1 1 1 2 2 2 2 DnaB-like helicase C terminal domain RecA PF00154.21 CCF73884.1 - 2.5e-05 23.9 0.5 7.6e-05 22.3 0.0 1.8 1 1 0 2 2 2 1 recA bacterial DNA recombination protein ATPase PF06745.13 CCF73884.1 - 0.00078 18.8 1.7 0.39 10.0 0.3 2.1 1 1 1 2 2 2 2 KaiC AAA_25 PF13481.6 CCF73884.1 - 0.0063 16.1 0.6 1.3 8.5 0.1 2.1 1 1 1 2 2 2 2 AAA domain AAA_33 PF13671.6 CCF73884.1 - 0.024 14.8 0.0 0.034 14.3 0.0 1.2 1 0 0 1 1 1 0 AAA domain eRF1_3 PF03465.15 CCF73884.1 - 0.053 14.0 0.0 0.089 13.3 0.0 1.3 1 0 0 1 1 1 0 eRF1 domain 3 Thymidylat_synt PF00303.19 CCF73886.1 - 7.2e-103 343.4 0.0 9.4e-103 343.0 0.0 1.1 1 0 0 1 1 1 1 Thymidylate synthase DHFR_1 PF00186.19 CCF73886.1 - 6.5e-30 104.0 0.0 1.6e-29 102.7 0.0 1.7 2 0 0 2 2 2 1 Dihydrofolate reductase PFK PF00365.20 CCF73886.1 - 0.001 18.4 0.0 0.046 13.0 0.0 2.1 2 0 0 2 2 2 2 Phosphofructokinase Cytidylate_kin2 PF13189.6 CCF73888.1 - 0.061 13.5 0.3 0.098 12.8 0.3 1.3 1 0 0 1 1 1 0 Cytidylate kinase-like family eIF-5_eIF-2B PF01873.17 CCF73889.1 - 0.2 11.6 2.5 21 5.0 0.2 3.0 2 1 1 3 3 3 0 Domain found in IF2B/IF5 Acetyltransf_1 PF00583.25 CCF73890.1 - 0.00074 19.7 0.0 0.0016 18.7 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Hat1_N PF10394.9 CCF73890.1 - 0.0011 19.3 0.1 0.0089 16.3 0.1 2.3 1 1 0 1 1 1 1 Histone acetyl transferase HAT1 N-terminus Acetyltransf_10 PF13673.7 CCF73890.1 - 0.0017 18.3 0.0 0.0035 17.3 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain zf-like PF04071.12 CCF73890.1 - 0.13 12.2 0.7 0.45 10.5 0.2 2.1 2 0 0 2 2 2 0 Cysteine-rich small domain Acetyltransf_7 PF13508.7 CCF73890.1 - 0.18 12.3 0.0 0.38 11.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MCM PF00493.23 CCF73891.1 - 1.1e-48 165.3 0.5 1.8e-48 164.6 0.5 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 CCF73891.1 - 3.5e-15 56.2 0.2 1.1e-14 54.6 0.0 1.9 2 0 0 2 2 1 1 MCM AAA-lid domain AAA_5 PF07728.14 CCF73891.1 - 2.4e-09 37.3 0.1 8.1e-08 32.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) MCM_OB PF17207.3 CCF73891.1 - 7.4e-07 29.1 0.1 1.6e-06 28.0 0.1 1.5 1 0 0 1 1 1 1 MCM OB domain Mg_chelatase PF01078.21 CCF73891.1 - 2.2e-06 27.2 0.4 0.00018 21.0 0.0 2.3 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 CCF73891.1 - 0.00012 21.8 0.1 0.0014 18.4 0.1 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain DUF815 PF05673.13 CCF73891.1 - 0.00027 20.2 0.0 0.0027 16.9 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_16 PF13191.6 CCF73891.1 - 0.00091 19.6 0.1 0.0019 18.6 0.1 1.5 1 0 0 1 1 1 1 AAA ATPase domain Lon_2 PF13337.6 CCF73891.1 - 0.001 17.8 0.0 0.0017 17.0 0.0 1.2 1 0 0 1 1 1 1 Putative ATP-dependent Lon protease AAA_3 PF07726.11 CCF73891.1 - 0.0051 16.7 0.0 0.013 15.3 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 CCF73891.1 - 0.01 15.6 0.2 0.023 14.4 0.2 1.5 1 1 0 1 1 1 0 AAA domain MCM_N PF14551.6 CCF73891.1 - 0.013 16.0 0.0 0.035 14.7 0.0 1.7 1 0 0 1 1 1 0 MCM N-terminal domain AAA_7 PF12775.7 CCF73891.1 - 0.018 14.5 0.1 0.044 13.3 0.1 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region cobW PF02492.19 CCF73891.1 - 0.049 13.2 0.5 0.12 12.0 0.3 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_29 PF13555.6 CCF73891.1 - 0.075 12.8 0.1 0.18 11.6 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_19 PF13245.6 CCF73891.1 - 0.11 12.8 0.1 0.24 11.7 0.1 1.6 1 0 0 1 1 1 0 AAA domain SMC_N PF02463.19 CCF73892.1 - 1.9e-23 83.1 0.0 1.2e-22 80.5 0.0 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 CCF73892.1 - 4.3e-10 40.4 17.4 4.3e-10 40.4 17.4 4.9 2 2 1 3 3 3 1 AAA domain AAA_29 PF13555.6 CCF73892.1 - 0.00042 20.0 0.0 0.001 18.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF885 PF05960.11 CCF73892.1 - 0.00046 20.0 7.8 0.00046 20.0 7.8 2.0 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF885) AAA_21 PF13304.6 CCF73892.1 - 0.0097 15.7 7.3 0.45 10.3 0.2 3.7 3 1 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system DUF948 PF06103.11 CCF73892.1 - 0.17 12.2 7.5 4.8 7.5 0.3 4.3 2 1 1 3 3 3 0 Bacterial protein of unknown function (DUF948) FUSC PF04632.12 CCF73892.1 - 1.6 7.2 2.7 2.5 6.6 2.7 1.3 1 0 0 1 1 1 0 Fusaric acid resistance protein family Phage_GPO PF05929.11 CCF73892.1 - 2.3 7.8 19.2 0.085 12.5 0.5 4.2 2 1 2 4 4 4 0 Phage capsid scaffolding protein (GPO) serine peptidase RAP PF08373.10 CCF73893.1 - 1.4e-11 44.3 0.4 6.5e-11 42.2 0.0 2.5 3 0 0 3 3 3 1 RAP domain MTES_1575 PF18741.1 CCF73893.1 - 0.0035 17.5 0.0 0.01 16.0 0.0 1.8 1 0 0 1 1 1 1 REase_MTES_1575 Ribosomal_L37 PF08561.10 CCF73894.1 - 0.00036 21.0 2.5 0.00036 21.0 2.5 2.1 1 1 1 2 2 2 1 Mitochondrial ribosomal protein L37 HNH_3 PF13392.6 CCF73894.1 - 0.095 12.5 0.6 0.17 11.6 0.6 1.4 1 0 0 1 1 1 0 HNH endonuclease GTP_EFTU PF00009.27 CCF73895.1 - 2.6e-41 141.3 0.0 3.4e-41 140.9 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 CCF73895.1 - 1.7e-24 86.2 0.0 4.6e-24 84.9 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 CCF73895.1 - 1.4e-06 28.5 0.0 3.9e-06 27.2 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF73895.1 - 0.021 14.9 0.0 0.14 12.3 0.0 2.3 1 1 0 1 1 1 0 50S ribosome-binding GTPase PAM2 PF07145.15 CCF73895.1 - 2.8 7.8 5.1 0.73 9.7 1.4 2.0 2 0 0 2 2 2 0 Ataxin-2 C-terminal region LRR_4 PF12799.7 CCF73896.1 - 1e-06 29.0 19.0 0.0008 19.7 0.8 6.3 2 2 2 6 6 6 4 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 CCF73896.1 - 0.0056 16.6 8.1 11 6.4 0.0 6.1 6 0 0 6 6 6 2 Leucine Rich repeat LRR_1 PF00560.33 CCF73896.1 - 0.76 10.6 18.0 69 4.6 0.0 7.8 7 2 0 7 7 7 0 Leucine Rich Repeat Pkinase PF00069.25 CCF73897.1 - 7e-72 242.0 0.0 1.1e-71 241.3 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73897.1 - 1e-38 133.1 0.0 1.6e-38 132.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 CCF73897.1 - 7.4e-15 55.3 0.2 2.7e-14 53.6 0.1 2.1 2 0 0 2 2 1 1 PH domain Kinase-like PF14531.6 CCF73897.1 - 2.1e-09 37.2 0.0 3.7e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Kinase-like EF-hand_1 PF00036.32 CCF73897.1 - 2.1e-08 33.1 4.5 0.011 15.2 0.4 4.1 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 CCF73897.1 - 5.2e-07 29.1 4.0 0.14 12.2 0.0 4.7 4 0 0 4 4 4 2 EF-hand domain Pkinase_fungal PF17667.1 CCF73897.1 - 5.6e-07 28.7 0.0 1.9e-06 27.0 0.0 1.8 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_7 PF13499.6 CCF73897.1 - 0.00011 22.6 0.1 0.00011 22.6 0.1 3.8 5 0 0 5 5 4 1 EF-hand domain pair EF-hand_8 PF13833.6 CCF73897.1 - 0.00055 19.7 4.3 0.23 11.3 0.7 3.5 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 CCF73897.1 - 0.0014 18.0 0.1 0.0028 17.0 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 CCF73897.1 - 0.0083 15.8 0.5 0.41 10.2 0.0 3.3 4 0 0 4 4 4 1 Kinetochore Sim4 complex subunit FTA2 Prok-RING_1 PF14446.6 CCF73897.1 - 0.017 15.0 2.0 0.022 14.7 0.6 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 RIO1 PF01163.22 CCF73897.1 - 0.025 14.2 0.1 0.067 12.8 0.1 1.7 1 0 0 1 1 1 0 RIO1 family DUF3500 PF12006.8 CCF73897.1 - 0.05 13.1 0.1 0.4 10.1 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3500) EF-hand_5 PF13202.6 CCF73897.1 - 0.057 12.9 6.1 0.94 9.1 0.0 3.6 3 0 0 3 3 3 0 EF hand zf-UBR PF02207.20 CCF73898.1 - 1.2e-15 57.4 15.0 1.2e-15 57.4 15.0 3.8 3 1 0 3 3 3 1 Putative zinc finger in N-recognin (UBR box) zf-RING_2 PF13639.6 CCF73898.1 - 0.00072 19.8 5.6 0.00072 19.8 5.6 4.0 3 0 0 3 3 3 1 Ring finger domain zf-RING_UBOX PF13445.6 CCF73898.1 - 0.001 19.1 5.1 0.0044 17.0 5.1 2.2 1 0 0 1 1 1 1 RING-type zinc-finger RRF PF01765.19 CCF73900.1 - 1.4e-06 28.3 8.6 1.4e-06 28.3 8.6 1.9 1 1 1 2 2 2 1 Ribosome recycling factor TypeIII_RM_meth PF12564.8 CCF73900.1 - 0.024 14.8 0.9 0.2 11.8 0.4 2.3 2 0 0 2 2 2 0 Type III restriction/modification enzyme methylation subunit Dermcidin PF15291.6 CCF73900.1 - 0.15 12.6 0.0 6.8 7.3 0.1 2.5 2 1 0 2 2 2 0 Dermcidin, antibiotic peptide Wx5_PLAF3D7 PF09688.10 CCF73900.1 - 0.16 12.0 5.1 2.1 8.3 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function (Wx5_PLAF3D7) MH2 PF03166.14 CCF73900.1 - 0.17 12.1 2.9 8.2 6.6 0.1 2.3 1 1 1 2 2 2 0 MH2 domain DUF4889 PF16230.5 CCF73902.1 - 0.056 13.7 0.3 6.4 7.1 0.0 3.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4889) RmuC PF02646.16 CCF73902.1 - 0.079 12.1 2.4 3.7 6.6 0.2 3.2 3 0 0 3 3 3 0 RmuC family Mannosyl_trans PF05007.13 CCF73903.1 - 4.8e-56 190.5 35.4 1e-55 189.4 35.4 1.6 1 0 0 1 1 1 1 Mannosyltransferase (PIG-M) PIG-U PF06728.13 CCF73903.1 - 2.7e-14 53.0 40.8 2.7e-14 53.0 40.8 2.0 1 1 2 3 3 3 1 GPI transamidase subunit PIG-U GT87 PF09594.10 CCF73903.1 - 1.9e-05 24.5 0.9 1.9e-05 24.5 0.9 2.0 2 0 0 2 2 2 1 Glycosyltransferase family 87 zf-P11 PF03854.14 CCF73904.1 - 0.04 13.6 2.8 0.17 11.6 2.8 2.0 1 0 0 1 1 1 0 P-11 zinc finger Kelch_4 PF13418.6 CCF73907.1 - 6.1e-16 58.2 1.0 1.2e-05 25.2 0.0 5.6 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_5 PF13854.6 CCF73907.1 - 1.4e-15 56.9 8.1 2.1e-05 24.4 0.0 6.3 6 0 0 6 6 6 4 Kelch motif Kelch_3 PF13415.6 CCF73907.1 - 3.8e-10 39.8 0.8 0.0003 21.0 0.0 5.2 5 0 0 5 5 5 2 Galactose oxidase, central domain Kelch_1 PF01344.25 CCF73907.1 - 5.1e-08 32.4 0.1 3.4e-05 23.3 0.0 3.1 2 0 0 2 2 2 2 Kelch motif Kelch_6 PF13964.6 CCF73907.1 - 6.5e-08 32.6 1.2 0.017 15.4 0.0 5.0 5 0 0 5 5 5 2 Kelch motif Kelch_2 PF07646.15 CCF73907.1 - 5.3e-05 23.0 4.9 0.01 15.8 0.0 5.1 6 0 0 6 6 6 1 Kelch motif DUF4460 PF14687.6 CCF73908.1 - 2.3e-05 24.4 0.0 2.6e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4460) TFIIS_C PF01096.18 CCF73910.1 - 2.9e-20 71.8 3.4 2.9e-20 71.8 3.4 2.7 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.7 CCF73910.1 - 1e-07 31.8 5.2 0.00079 19.3 0.2 2.4 2 0 0 2 2 2 2 Transposase zinc-ribbon domain RNA_POL_M_15KD PF02150.16 CCF73910.1 - 1.7e-06 27.8 11.0 8e-06 25.6 0.3 3.2 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit Lar_restr_allev PF14354.6 CCF73910.1 - 3e-05 24.3 2.1 0.006 16.9 0.0 2.1 2 0 0 2 2 2 2 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 CCF73910.1 - 0.0031 17.6 3.2 27 5.0 0.1 4.1 4 0 0 4 4 4 0 Zinc ribbon domain DUF2387 PF09526.10 CCF73910.1 - 0.0044 17.1 1.1 1.9 8.7 0.1 2.3 1 1 1 2 2 2 2 Probable metal-binding protein (DUF2387) zf-Mss51 PF13824.6 CCF73910.1 - 0.042 14.0 6.1 0.35 11.0 0.3 2.3 2 0 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Baculo_LEF5_C PF11792.8 CCF73910.1 - 0.045 13.4 1.8 0.41 10.4 0.0 2.8 3 0 0 3 3 3 0 Baculoviridae late expression factor 5 C-terminal domain zf-piccolo PF05715.13 CCF73910.1 - 0.046 13.9 10.4 0.7 10.1 3.2 2.8 2 2 0 2 2 2 0 Piccolo Zn-finger DUF1679 PF07914.11 CCF73910.1 - 0.089 11.6 0.1 0.11 11.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) C1_4 PF07975.12 CCF73910.1 - 0.11 12.8 11.7 2.6 8.3 1.2 3.3 2 2 1 3 3 3 0 TFIIH C1-like domain Zn_Tnp_IS1 PF03811.13 CCF73910.1 - 0.15 11.8 9.8 0.24 11.2 2.3 3.1 3 1 0 3 3 3 0 InsA N-terminal domain DUF2321 PF10083.9 CCF73910.1 - 0.38 10.4 5.1 0.24 11.0 0.2 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) zf_UBZ PF18439.1 CCF73910.1 - 0.4 10.3 9.7 6.4 6.5 0.5 4.1 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger IBR PF01485.21 CCF73910.1 - 0.4 10.9 11.4 7e+02 0.6 11.4 2.8 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain zinc_ribbon_10 PF10058.9 CCF73910.1 - 0.43 10.3 12.3 1.1 9.1 1.1 2.7 2 1 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein zf-ribbon_3 PF13248.6 CCF73910.1 - 0.51 9.8 12.6 6.3 6.3 0.3 4.1 4 0 0 4 4 4 0 zinc-ribbon domain zf-ZPR1 PF03367.13 CCF73910.1 - 0.59 10.0 6.9 2.7 7.8 0.6 2.3 2 1 0 2 2 2 0 ZPR1 zinc-finger domain TF_Zn_Ribbon PF08271.12 CCF73910.1 - 0.96 9.0 11.7 1.8 8.2 3.9 3.2 3 1 0 3 3 3 0 TFIIB zinc-binding zf-RING_7 PF02591.15 CCF73910.1 - 1.4 9.2 7.4 18 5.6 0.4 3.7 4 0 0 4 4 4 0 C4-type zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 CCF73910.1 - 2 8.4 0.1 0.96 9.5 0.6 3.5 2 2 1 3 3 3 0 PhnA Zinc-Ribbon Mut7-C PF01927.16 CCF73910.1 - 2.2 8.4 5.5 3.9 7.6 4.9 1.8 1 1 1 2 2 2 0 Mut7-C RNAse domain UPF0547 PF10571.9 CCF73910.1 - 2.4 8.3 8.9 1.3 9.1 0.8 3.3 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 XPG_I PF00867.18 CCF73911.1 - 3.6e-26 91.3 0.0 1.2e-25 89.7 0.0 2.0 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 CCF73911.1 - 3.9e-16 59.4 0.0 9.7e-16 58.1 0.0 1.7 1 0 0 1 1 1 1 XPG N-terminal domain zf-Tim10_DDP PF02953.15 CCF73911.1 - 2.5e-12 46.2 1.2 5.9e-12 45.1 1.2 1.6 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Pox_G5 PF04599.12 CCF73911.1 - 0.00016 20.8 0.2 0.0003 19.9 0.2 1.3 1 0 0 1 1 1 1 Poxvirus G5 protein XPG_I_2 PF12813.7 CCF73911.1 - 0.00064 19.3 0.0 0.0015 18.1 0.0 1.6 1 0 0 1 1 1 1 XPG domain containing PCI PF01399.27 CCF73911.1 - 0.078 13.5 0.1 44 4.7 0.0 3.4 3 0 0 3 3 3 0 PCI domain 5_3_exonuc PF01367.20 CCF73911.1 - 0.089 13.4 0.0 0.33 11.6 0.0 2.0 1 0 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold EF-hand_1 PF00036.32 CCF73912.1 - 0.07 12.7 0.1 0.5 10.0 0.0 2.5 3 0 0 3 3 3 0 EF hand tRNA_m1G_MT PF01746.21 CCF73913.1 - 5.1e-09 36.1 0.1 5.1e-09 36.1 0.1 2.3 2 1 0 2 2 2 1 tRNA (Guanine-1)-methyltransferase DUF2325 PF10087.9 CCF73916.1 - 0.1 12.7 0.4 3.9 7.7 0.0 2.5 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) SURF1 PF02104.15 CCF73917.1 - 1.5e-28 100.2 0.0 2.3e-28 99.6 0.0 1.2 1 0 0 1 1 1 1 SURF1 family PRP9_N PF16958.5 CCF73917.1 - 0.32 11.0 3.4 0.77 9.8 0.7 2.4 3 0 0 3 3 3 0 Pre-mRNA-splicing factor PRP9 N-terminus zf-C3HC4_3 PF13920.6 CCF73919.1 - 3.2e-07 30.1 8.3 4.2e-06 26.5 5.4 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF73919.1 - 7.7e-07 29.0 11.7 7.7e-07 29.0 11.7 2.0 2 1 0 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 CCF73919.1 - 3.2e-06 26.9 6.7 5.4e-05 23.0 2.7 2.5 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 CCF73919.1 - 7.5e-06 25.7 5.5 3.1e-05 23.8 5.6 2.1 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF73919.1 - 5.1e-05 23.0 9.4 7.6e-05 22.5 4.9 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF73919.1 - 8.4e-05 22.5 8.5 0.00015 21.7 5.7 2.7 1 1 2 3 3 3 1 RING-type zinc-finger zf-RING_2 PF13639.6 CCF73919.1 - 9.8e-05 22.6 12.2 0.00089 19.5 11.1 2.5 1 1 1 2 2 2 1 Ring finger domain zf-C3HC4_4 PF15227.6 CCF73919.1 - 0.016 15.3 4.2 0.016 15.3 4.2 2.3 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING Rtf2 PF04641.12 CCF73919.1 - 0.031 13.6 1.6 0.065 12.6 1.6 1.5 1 0 0 1 1 1 0 Rtf2 RING-finger DUF1258 PF06869.12 CCF73919.1 - 0.14 11.6 3.2 0.29 10.6 3.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) zf-RING_6 PF14835.6 CCF73919.1 - 0.15 11.9 1.8 0.69 9.8 0.4 2.4 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-RING_11 PF17123.5 CCF73919.1 - 0.35 10.6 6.1 5.6 6.8 1.7 3.2 3 0 0 3 3 3 0 RING-like zinc finger zf-rbx1 PF12678.7 CCF73919.1 - 0.42 10.9 8.8 2.1 8.7 8.9 2.2 1 1 1 2 2 2 0 RING-H2 zinc finger domain FYVE PF01363.21 CCF73919.1 - 3.4 7.9 9.7 15 5.8 9.7 2.1 1 1 0 1 1 1 0 FYVE zinc finger zf-RING_4 PF14570.6 CCF73919.1 - 4 7.3 9.2 0.74 9.7 4.1 2.3 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain RecR PF02132.15 CCF73919.1 - 9.4 5.9 8.4 4.7 6.9 4.7 2.2 2 0 0 2 2 2 0 RecR protein XAP5 PF04921.14 CCF73920.1 - 7.7e-44 150.4 10.8 1.7e-43 149.3 10.8 1.6 1 1 0 1 1 1 1 XAP5, circadian clock regulator Lipase_GDSL_3 PF14606.6 CCF73920.1 - 0.038 14.1 2.2 0.65 10.1 1.0 2.1 1 1 1 2 2 2 0 GDSL-like Lipase/Acylhydrolase family CPW_WPC PF09717.10 CCF73921.1 - 2.6e-26 92.4 15.1 2.8e-14 53.8 3.1 2.2 2 0 0 2 2 2 2 Plasmodium falciparum domain of unknown function (CPW_WPC) FH2 PF02181.23 CCF73922.1 - 1.9e-58 198.4 0.3 1.9e-58 198.4 0.3 1.8 2 0 0 2 2 2 1 Formin Homology 2 Domain TPR_12 PF13424.6 CCF73922.1 - 7.3e-07 29.4 0.0 0.047 14.0 0.0 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73922.1 - 0.0038 17.0 4.4 4.8 7.2 0.1 4.8 5 0 0 5 5 5 1 Tetratricopeptide repeat Laminin_II PF06009.12 CCF73922.1 - 0.0038 17.3 5.8 0.12 12.3 1.4 3.4 2 1 1 3 3 3 2 Laminin Domain II TPR_10 PF13374.6 CCF73922.1 - 0.0046 16.8 2.1 28 4.8 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_2 PF07719.17 CCF73922.1 - 0.064 13.4 2.6 23 5.4 0.0 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat Tropomyosin_1 PF12718.7 CCF73922.1 - 4.5 7.4 15.7 0.079 13.1 0.4 3.8 4 0 0 4 4 4 0 Tropomyosin like Pinin_SDK_memA PF04696.13 CCF73922.1 - 8.7 6.4 12.7 0.88 9.6 7.0 2.2 2 0 0 2 2 2 0 pinin/SDK/memA/ protein conserved region TH1 PF04858.13 CCF73923.1 - 7.3e-11 41.4 5.9 1.4e-06 27.2 1.2 3.4 3 0 0 3 3 3 3 TH1 protein Mito_carr PF00153.27 CCF73924.1 - 2e-36 123.8 1.0 2e-14 53.2 0.1 3.3 2 1 1 3 3 3 3 Mitochondrial carrier protein BTB_2 PF02214.22 CCF73925.1 - 7.5e-17 61.5 0.0 1.6e-16 60.4 0.0 1.5 1 0 0 1 1 1 1 BTB/POZ domain zf-RING_2 PF13639.6 CCF73926.1 - 1.6e-09 37.9 12.6 3e-09 37.0 12.6 1.5 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 CCF73926.1 - 6.8e-07 29.5 10.7 1.7e-06 28.2 10.7 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 CCF73926.1 - 1.8e-05 24.6 12.2 3.4e-05 23.7 12.2 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 CCF73926.1 - 2.5e-05 24.0 9.2 4.1e-05 23.3 9.2 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF73926.1 - 2.8e-05 23.9 12.9 7.1e-05 22.6 12.9 1.7 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF73926.1 - 7.8e-05 22.6 5.3 7.8e-05 22.6 5.3 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 CCF73926.1 - 7.8e-05 22.6 5.1 0.00017 21.5 5.1 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 CCF73926.1 - 8.8e-05 22.3 12.9 0.00021 21.1 12.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 CCF73926.1 - 0.00083 18.9 11.1 0.0035 16.9 11.3 1.8 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 CCF73926.1 - 0.00092 18.9 7.8 0.0025 17.5 7.8 1.8 1 0 0 1 1 1 1 RING-like zinc finger Rtf2 PF04641.12 CCF73926.1 - 0.0045 16.4 10.2 0.024 14.0 9.3 2.3 1 1 0 1 1 1 1 Rtf2 RING-finger Jnk-SapK_ap_N PF09744.9 CCF73926.1 - 0.008 16.4 7.9 0.1 12.8 3.7 2.7 1 1 0 2 2 2 1 JNK_SAPK-associated protein-1 KASH_CCD PF14662.6 CCF73926.1 - 0.011 15.6 11.5 0.019 14.8 10.7 1.7 1 1 0 1 1 1 0 Coiled-coil region of CCDC155 or KASH TolA_bind_tri PF16331.5 CCF73926.1 - 0.015 15.4 5.1 2.6 8.2 0.3 3.3 3 0 0 3 3 3 0 TolA binding protein trimerisation Prok-RING_4 PF14447.6 CCF73926.1 - 0.016 15.0 10.7 0.13 12.1 11.1 2.1 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 SOGA PF11365.8 CCF73926.1 - 0.034 15.3 2.7 0.034 15.3 2.7 2.3 2 0 0 2 2 2 0 Protein SOGA Pellino PF04710.14 CCF73926.1 - 0.06 12.0 1.2 0.11 11.2 1.2 1.3 1 0 0 1 1 1 0 Pellino DUF3450 PF11932.8 CCF73926.1 - 0.075 12.3 3.6 0.093 12.0 2.7 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) FANCL_C PF11793.8 CCF73926.1 - 0.16 12.2 9.9 0.46 10.7 9.9 1.8 1 1 0 1 1 1 0 FANCL C-terminal domain ADIP PF11559.8 CCF73926.1 - 0.17 12.0 10.8 0.053 13.6 5.5 2.2 2 0 0 2 2 2 0 Afadin- and alpha -actinin-Binding TMF_TATA_bd PF12325.8 CCF73926.1 - 0.2 11.9 6.3 0.14 12.4 3.1 2.2 2 1 0 2 2 2 0 TATA element modulatory factor 1 TATA binding zf-RING-like PF08746.11 CCF73926.1 - 0.22 11.9 13.1 0.37 11.1 13.1 1.4 1 0 0 1 1 1 0 RING-like domain Mt_ATP-synt_B PF05405.14 CCF73926.1 - 0.28 10.8 7.1 0.15 11.7 1.6 2.6 2 1 1 3 3 3 0 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) zf-C3HC4_4 PF15227.6 CCF73926.1 - 0.87 9.8 9.7 1.8 8.8 9.7 1.6 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-C3H2C3 PF17122.5 CCF73926.1 - 1.1 9.3 11.6 5.6 7.1 11.6 2.0 1 1 0 1 1 1 0 Zinc-finger DUF16 PF01519.16 CCF73926.1 - 1.2 9.7 9.6 2.4 8.7 0.3 3.2 2 1 2 4 4 3 0 Protein of unknown function DUF16 FlaC_arch PF05377.11 CCF73926.1 - 1.4 9.3 6.5 3.8 8.0 0.5 3.0 2 1 0 3 3 3 0 Flagella accessory protein C (FlaC) zf-HC5HC2H PF13771.6 CCF73926.1 - 1.5 9.1 9.8 6.4 7.1 9.7 2.0 1 1 1 2 2 2 0 PHD-like zinc-binding domain Csm1_N PF18504.1 CCF73926.1 - 1.5 9.2 8.1 0.88 10.0 2.3 2.9 2 1 1 3 3 3 0 Csm1 N-terminal domain Prok-RING_1 PF14446.6 CCF73926.1 - 4.3 7.3 11.2 6.5 6.8 5.3 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 1 Fungal_TACC PF12709.7 CCF73926.1 - 5.1 7.6 12.7 5.1 7.6 1.7 3.3 1 1 2 3 3 3 0 Fungal Transforming acidic coiled-coil (TACC) proteins RINGv PF12906.7 CCF73926.1 - 8.1 6.7 13.9 11 6.3 12.9 1.8 2 0 0 2 2 1 0 RING-variant domain Pkinase PF00069.25 CCF73927.1 - 1.9e-65 220.9 0.0 2.3e-65 220.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF73927.1 - 2.5e-31 108.9 0.0 3.2e-31 108.6 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF73927.1 - 4.9e-05 22.8 0.0 0.00016 21.1 0.0 1.8 2 0 0 2 2 2 1 Kinase-like RIO1 PF01163.22 CCF73927.1 - 8.4e-05 22.3 0.0 0.00012 21.7 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Haspin_kinase PF12330.8 CCF73927.1 - 0.022 13.7 0.2 0.06 12.3 0.2 1.8 1 1 0 1 1 1 0 Haspin like kinase domain Kdo PF06293.14 CCF73927.1 - 0.057 12.8 0.0 0.086 12.2 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF73927.1 - 0.091 12.7 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Memo PF01875.17 CCF73929.1 - 3.3e-73 246.2 0.0 3.8e-73 246.0 0.0 1.0 1 0 0 1 1 1 1 Memo-like protein P16-Arc PF04699.14 CCF73929.1 - 0.1 13.1 0.0 0.31 11.5 0.0 1.7 2 0 0 2 2 2 0 ARP2/3 complex 16 kDa subunit (p16-Arc) LETM1 PF07766.13 CCF73930.1 - 1.9e-77 260.2 10.6 1.9e-77 260.2 10.6 2.0 2 0 0 2 2 2 1 LETM1-like protein HTH_26 PF13443.6 CCF73930.1 - 0.094 13.2 0.3 0.46 11.0 0.0 2.3 3 0 0 3 3 3 0 Cro/C1-type HTH DNA-binding domain zf-CDGSH PF09360.10 CCF73931.1 - 1.1e-09 38.4 0.1 1.8e-09 37.7 0.1 1.5 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type Lectin_like PF18560.1 CCF73932.1 - 0.017 15.3 0.0 0.027 14.6 0.0 1.2 1 0 0 1 1 1 0 Lectin like domain Maf1 PF09174.10 CCF73933.1 - 1.5e-33 116.4 6.3 1.8e-33 116.1 6.3 1.2 1 0 0 1 1 1 1 Maf1 regulator Arf PF00025.21 CCF73935.1 - 4.4e-39 133.7 0.0 5e-39 133.5 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 CCF73935.1 - 1.2e-07 31.2 0.0 2.5e-07 30.2 0.0 1.5 1 1 0 1 1 1 1 G-protein alpha subunit Ras PF00071.22 CCF73935.1 - 3.2e-06 26.8 0.0 3.8e-06 26.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 CCF73935.1 - 7.9e-05 22.1 0.0 0.0001 21.8 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region Roc PF08477.13 CCF73935.1 - 0.00012 22.3 0.0 0.00016 21.9 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase GTP_EFTU PF00009.27 CCF73935.1 - 0.024 14.2 0.0 0.046 13.3 0.0 1.4 1 1 0 1 1 1 0 Elongation factor Tu GTP binding domain NOG1 PF06858.14 CCF73935.1 - 0.19 11.5 0.1 0.47 10.3 0.1 1.6 1 1 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) CAS_CSE1 PF03378.15 CCF73936.1 - 1.1e-40 139.5 8.8 1.1e-40 139.5 8.8 1.7 2 0 0 2 2 2 1 CAS/CSE protein, C-terminus Cse1 PF08506.10 CCF73936.1 - 3.9e-30 104.9 3.6 1.1e-29 103.4 1.7 2.6 2 1 0 2 2 2 1 Cse1 IBN_N PF03810.19 CCF73936.1 - 4.4e-05 23.3 0.6 0.014 15.3 0.0 3.4 3 0 0 3 3 3 2 Importin-beta N-terminal domain Ecm29 PF13001.7 CCF73936.1 - 0.00047 19.0 4.0 0.0024 16.6 0.4 2.3 2 0 0 2 2 2 2 Proteasome stabiliser zinc_ribbon_5 PF13719.6 CCF73937.1 - 0.012 15.3 0.4 0.024 14.4 0.4 1.4 1 0 0 1 1 1 0 zinc-ribbon domain YacG PF03884.14 CCF73937.1 - 0.07 12.9 1.4 0.11 12.3 1.4 1.3 1 0 0 1 1 1 0 DNA gyrase inhibitor YacG SGS PF05002.15 CCF73938.1 - 6.9e-17 61.3 3.2 9.3e-17 60.9 3.2 1.2 1 0 0 1 1 1 1 SGS domain partial_CstF PF15861.5 CCF73939.1 - 3.3e-19 68.4 0.2 6.1e-19 67.6 0.2 1.4 1 0 0 1 1 1 1 Partial cleavage stimulation factor domain CSTF2_hinge PF14327.6 CCF73939.1 - 1.6e-12 47.7 0.5 1.6e-12 47.7 0.5 2.1 2 1 0 2 2 2 1 Hinge domain of cleavage stimulation factor subunit 2 SHD1 PF03983.12 CCF73940.1 - 0.11 12.3 0.0 0.39 10.6 0.0 2.0 2 0 0 2 2 2 0 SLA1 homology domain 1, SHD1 Peptidase_M17 PF00883.21 CCF73941.1 - 8.1e-100 334.1 0.1 1.2e-99 333.6 0.1 1.2 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain DUF4179 PF13786.6 CCF73941.1 - 0.73 10.3 4.7 1.3 9.6 0.2 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4179) DEAD PF00270.29 CCF73942.1 - 5.7e-48 163.0 0.0 1e-47 162.2 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73942.1 - 7.6e-30 103.5 0.0 4.6e-29 101.0 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF73942.1 - 6.8e-05 22.9 0.0 0.00012 22.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 CCF73942.1 - 0.058 12.6 0.0 0.09 12.0 0.0 1.2 1 0 0 1 1 1 0 ERCC3/RAD25/XPB C-terminal helicase SPOC PF07744.13 CCF73943.1 - 7.6e-05 22.7 0.0 0.00017 21.5 0.0 1.6 1 1 0 1 1 1 1 SPOC domain MTS PF05175.14 CCF73944.1 - 2.5e-05 23.9 0.0 3.4e-05 23.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 CCF73944.1 - 0.00094 18.6 0.0 0.0013 18.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_31 PF13847.6 CCF73944.1 - 0.0017 18.1 0.1 0.0048 16.7 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF73944.1 - 0.0026 18.4 0.0 0.0037 17.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF73944.1 - 0.0036 18.0 0.0 0.0061 17.2 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF73944.1 - 0.012 16.4 0.0 0.018 15.8 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain P-mevalo_kinase PF04275.14 CCF73944.1 - 0.029 14.3 0.0 0.043 13.8 0.0 1.2 1 0 0 1 1 1 0 Phosphomevalonate kinase CheR PF01739.18 CCF73944.1 - 0.07 12.6 0.0 0.095 12.2 0.0 1.2 1 0 0 1 1 1 0 CheR methyltransferase, SAM binding domain NAD_binding_3 PF03447.16 CCF73944.1 - 0.093 13.4 0.0 0.22 12.2 0.0 1.6 1 1 1 2 2 2 0 Homoserine dehydrogenase, NAD binding domain PCMT PF01135.19 CCF73944.1 - 0.098 12.4 0.0 0.12 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 CCF73944.1 - 0.12 12.2 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 CCF73944.1 - 0.14 12.2 0.0 0.21 11.6 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_S17_N PF16205.5 CCF73945.1 - 6.1e-28 97.0 0.6 9.6e-28 96.4 0.6 1.3 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Ribosomal_S17 PF00366.20 CCF73945.1 - 1.8e-27 95.2 0.3 3e-27 94.5 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S17 ERp29 PF07749.12 CCF73946.1 - 0.023 15.6 0.2 16 6.5 0.1 2.8 3 0 0 3 3 3 0 Endoplasmic reticulum protein ERp29, C-terminal domain Nas2_N PF18265.1 CCF73947.1 - 2.6e-28 97.8 0.1 3e-28 97.5 0.1 1.1 1 0 0 1 1 1 1 Nas2 N_terminal domain Seryl_tRNA_N PF02403.22 CCF73947.1 - 0.082 13.1 1.4 0.28 11.4 1.4 1.8 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain GH-E PF14410.6 CCF73949.1 - 0.27 11.7 0.4 0.27 11.7 0.4 2.2 2 0 0 2 2 2 0 HNH/ENDO VII superfamily nuclease with conserved GHE residues Poty_PP PF08440.10 CCF73950.1 - 0.12 11.5 0.0 0.23 10.5 0.0 1.4 1 0 0 1 1 1 0 Potyviridae polyprotein DUF2093 PF09866.9 CCF73951.1 - 0.073 12.5 0.1 0.14 11.6 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2093) L51_S25_CI-B8 PF05047.16 CCF73952.1 - 0.0007 19.5 0.1 0.0016 18.4 0.1 1.6 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain DDT PF02791.17 CCF73953.1 - 0.03 14.6 2.8 6.6 7.1 0.2 3.1 3 0 0 3 3 3 0 DDT domain DUF1754 PF08555.10 CCF73954.1 - 0.14 13.0 1.1 0.17 12.7 0.1 1.6 2 0 0 2 2 2 0 Eukaryotic family of unknown function (DUF1754) MFS_1 PF07690.16 CCF73955.1 - 9.4e-11 41.2 25.9 2.1e-10 40.1 25.8 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily TMEM132D_C PF15706.5 CCF73955.1 - 2.3 8.0 4.6 0.74 9.6 0.1 2.4 2 0 0 2 2 2 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term HA2 PF04408.23 CCF73956.1 - 7.1e-18 64.9 0.0 1.5e-17 63.8 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) Helicase_C PF00271.31 CCF73956.1 - 4.5e-10 39.8 0.0 4.3e-09 36.7 0.0 2.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain OB_NTP_bind PF07717.16 CCF73956.1 - 1.6e-07 31.6 0.1 3.9e-07 30.3 0.1 1.6 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold DEAD PF00270.29 CCF73956.1 - 1.1e-06 28.5 0.0 2.4e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 CCF73956.1 - 0.0075 16.6 0.0 0.026 14.8 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CCF73956.1 - 0.025 14.3 0.1 0.054 13.2 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_30 PF13604.6 CCF73956.1 - 0.044 13.5 0.0 0.077 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 CCF73956.1 - 0.055 13.5 0.6 0.27 11.3 0.1 2.2 2 0 0 2 2 2 0 Helicase HerA, central domain ResIII PF04851.15 CCF73956.1 - 0.058 13.4 0.1 5.8 6.9 0.0 2.7 3 0 0 3 3 3 0 Type III restriction enzyme, res subunit AAA_22 PF13401.6 CCF73956.1 - 0.12 12.7 0.5 0.82 9.9 0.5 2.2 1 1 0 1 1 1 0 AAA domain IPP-2 PF04979.14 CCF73958.1 - 5.3e-15 56.3 5.2 6.2e-15 56.1 5.2 1.1 1 0 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) PAC3 PF10178.9 CCF73958.1 - 0.057 13.6 0.1 0.15 12.3 0.0 1.6 2 0 0 2 2 2 0 Proteasome assembly chaperone 3 Bromodomain PF00439.25 CCF73959.1 - 1.1e-21 76.7 0.4 3.5e-21 75.1 0.3 1.9 2 0 0 2 2 2 1 Bromodomain Acetyltransf_1 PF00583.25 CCF73959.1 - 9.2e-11 42.0 0.1 1.8e-10 41.1 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CCF73959.1 - 2.9e-07 30.5 0.1 5.3e-07 29.6 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CCF73959.1 - 8.7e-07 29.3 0.4 1.8e-06 28.3 0.4 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CCF73959.1 - 0.01 15.8 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 CCF73959.1 - 0.13 12.3 0.0 0.31 11.1 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Dopey_N PF04118.14 CCF73960.1 - 9.3e-86 287.7 3.9 9.3e-86 287.7 3.9 2.5 3 0 0 3 3 3 1 Dopey, N-terminal IMCp PF12314.8 CCF73961.1 - 1.4e-20 73.4 44.5 5.8e-17 61.8 22.8 2.4 1 1 1 2 2 2 2 Inner membrane complex protein Rhomboid PF01694.22 CCF73964.1 - 1.6e-17 63.9 11.5 6.5e-13 48.9 4.4 2.3 2 0 0 2 2 2 2 Rhomboid family Thioredoxin PF00085.20 CCF73965.1 - 1.8e-06 27.9 0.0 2.7e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CCF73965.1 - 0.0016 18.9 0.0 0.0019 18.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin-like domain HyaE PF07449.11 CCF73965.1 - 0.034 14.1 0.0 0.052 13.5 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE GCV_T PF01571.21 CCF73966.1 - 8.5e-26 90.9 0.0 1.2e-25 90.3 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 CCF73966.1 - 0.0023 17.8 0.0 0.0049 16.8 0.0 1.5 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain Recep_L_domain PF01030.24 CCF73966.1 - 0.039 14.1 0.3 2.3 8.3 0.0 2.7 2 0 0 2 2 2 0 Receptor L domain FIIND PF13553.6 CCF73966.1 - 0.17 11.3 0.9 2.1 7.7 0.1 2.2 2 0 0 2 2 2 0 Function to find HSP70 PF00012.20 CCF73967.1 - 7.8e-35 120.1 0.1 7.8e-35 120.1 0.1 2.7 2 1 0 2 2 2 1 Hsp70 protein MreB_Mbl PF06723.13 CCF73967.1 - 3.2e-05 22.9 0.5 0.008 15.0 0.1 2.2 2 0 0 2 2 2 2 MreB/Mbl protein YhdB PF14148.6 CCF73967.1 - 0.16 12.1 0.1 0.16 12.1 0.1 2.5 3 0 0 3 3 3 0 YhdB-like protein FHA PF00498.26 CCF73968.1 - 6.4e-13 48.9 1.1 3.8e-11 43.2 0.1 3.3 3 0 0 3 3 3 1 FHA domain RINGv PF12906.7 CCF73968.1 - 1.2e-11 44.6 8.4 2.2e-11 43.7 8.4 1.5 1 0 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 CCF73968.1 - 2.4e-05 24.6 0.1 0.00034 20.8 0.0 2.6 3 0 0 3 3 3 1 Inner membrane component of T3SS, cytoplasmic domain FANCL_C PF11793.8 CCF73968.1 - 0.0093 16.1 5.5 0.019 15.1 5.5 1.5 1 0 0 1 1 1 1 FANCL C-terminal domain zf-RING_2 PF13639.6 CCF73968.1 - 0.062 13.6 7.7 0.17 12.2 7.8 1.8 1 1 0 1 1 1 0 Ring finger domain OTCace_N PF02729.21 CCF73970.1 - 9.2e-36 123.1 0.0 1.3e-35 122.6 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 CCF73970.1 - 3.7e-29 101.8 0.0 5.4e-29 101.3 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DUF1981 PF09324.10 CCF73973.1 - 0.049 13.5 0.1 0.17 11.8 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF1981) HVSL PF09749.9 CCF73974.1 - 3.8e-19 69.1 0.0 7.4e-19 68.2 0.0 1.5 1 1 0 1 1 1 1 Uncharacterised conserved protein CAAP1 PF15335.6 CCF73974.1 - 0.076 13.6 0.2 0.23 12.0 0.0 1.8 2 0 0 2 2 2 0 Caspase activity and apoptosis inhibitor 1 DUF192 PF02643.15 CCF73975.1 - 0.039 14.1 0.0 0.077 13.2 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized ACR, COG1430 UDPGP PF01704.18 CCF73976.1 - 2.2e-13 49.7 0.1 2.8e-13 49.3 0.1 1.1 1 0 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transf_3 PF12804.7 CCF73976.1 - 0.00016 22.1 0.0 0.00038 20.9 0.0 1.6 2 0 0 2 2 2 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 CCF73976.1 - 0.055 13.0 0.0 0.17 11.4 0.0 1.9 1 1 0 1 1 1 0 Nucleotidyl transferase IspD PF01128.19 CCF73976.1 - 0.071 12.8 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Kelch_1 PF01344.25 CCF73977.1 - 7.3e-51 169.5 9.0 5.2e-12 45.2 0.1 6.3 6 0 0 6 6 6 6 Kelch motif Kelch_6 PF13964.6 CCF73977.1 - 9e-31 105.1 2.3 2.2e-06 27.7 0.0 6.3 4 1 2 6 6 6 5 Kelch motif Kelch_4 PF13418.6 CCF73977.1 - 7.2e-21 73.9 0.3 0.0007 19.6 0.0 5.7 5 1 1 6 6 6 5 Galactose oxidase, central domain BTB_2 PF02214.22 CCF73977.1 - 4.2e-17 62.3 3.3 5.9e-16 58.6 0.0 2.8 3 0 0 3 3 3 1 BTB/POZ domain Kelch_3 PF13415.6 CCF73977.1 - 1.6e-14 53.7 1.0 0.02 15.2 0.0 6.1 6 0 0 6 6 6 3 Galactose oxidase, central domain Kelch_2 PF07646.15 CCF73977.1 - 1.3e-08 34.5 5.5 2.1 8.5 0.0 5.7 6 0 0 6 6 6 3 Kelch motif Kelch_5 PF13854.6 CCF73977.1 - 1.4e-05 25.0 5.1 3.5 7.7 0.1 6.1 6 0 0 6 6 6 1 Kelch motif TMPIT PF07851.13 CCF73977.1 - 0.0061 15.8 2.7 0.0061 15.8 2.7 1.5 1 1 1 2 2 2 1 TMPIT-like protein AHSP PF09236.10 CCF73977.1 - 0.015 15.8 0.1 0.084 13.3 0.1 2.2 2 0 0 2 2 2 0 Alpha-haemoglobin stabilising protein PQQ PF01011.21 CCF73977.1 - 0.1 12.5 0.1 0.36 10.8 0.0 2.0 2 0 0 2 2 2 0 PQQ enzyme repeat DDHD PF02862.17 CCF73977.1 - 0.33 11.1 2.1 0.5 10.5 2.1 1.2 1 0 0 1 1 1 0 DDHD domain Spc42p PF11544.8 CCF73977.1 - 1.5 8.9 10.2 12 6.0 7.0 2.4 2 0 0 2 2 2 0 Spindle pole body component Spc42p Prominin PF05478.11 CCF73977.1 - 1.9 6.3 7.6 2.6 5.9 7.6 1.1 1 0 0 1 1 1 0 Prominin DUF3584 PF12128.8 CCF73977.1 - 4.6 4.6 17.3 6.4 4.2 17.3 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) VPS13_C PF16909.5 CCF73978.1 - 2.9e-12 46.7 0.0 2.9e-12 46.7 0.0 3.3 4 0 0 4 4 4 1 Vacuolar-sorting-associated 13 protein C-terminal Chorein_N PF12624.7 CCF73978.1 - 2.1e-10 40.7 2.5 4.8e-10 39.6 0.3 2.8 3 0 0 3 3 3 1 N-terminal region of Chorein or VPS13 VPS13 PF16908.5 CCF73978.1 - 1e-07 32.0 1.2 3.9e-06 26.8 0.2 3.1 3 0 0 3 3 3 1 Vacuolar sorting-associated protein 13, N-terminal WD40 PF00400.32 CCF73979.1 - 1e-24 86.3 9.5 1.1e-06 29.2 0.0 7.4 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF73979.1 - 3.1e-11 43.4 0.1 0.0093 16.2 0.0 5.9 3 1 4 7 7 7 4 Anaphase-promoting complex subunit 4 WD40 domain PRP4 PF08799.11 CCF73979.1 - 6.1e-08 32.1 1.4 9.1e-08 31.5 0.3 1.9 2 0 0 2 2 2 1 pre-mRNA processing factor 4 (PRP4) like Ge1_WD40 PF16529.5 CCF73979.1 - 4e-05 22.7 0.1 0.17 10.8 0.0 2.7 2 1 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein Cytochrom_D1 PF02239.16 CCF73979.1 - 0.00034 19.2 0.5 0.0037 15.8 0.1 2.4 2 1 0 2 2 2 1 Cytochrome D1 heme domain eIF2A PF08662.11 CCF73979.1 - 0.0004 20.3 0.1 0.51 10.2 0.1 3.7 2 2 2 4 4 4 1 Eukaryotic translation initiation factor eIF2A AP2 PF00847.20 CCF73980.1 - 3.8e-17 62.2 11.6 3.6e-07 30.3 1.6 4.1 4 0 0 4 4 4 3 AP2 domain PEPCK_ATP PF01293.20 CCF73981.1 - 5e-196 651.9 0.0 5.8e-196 651.7 0.0 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase AAA_33 PF13671.6 CCF73981.1 - 0.18 12.0 0.1 0.41 10.8 0.1 1.6 1 0 0 1 1 1 0 AAA domain Myosin_head PF00063.21 CCF73982.1 - 6.7e-184 612.8 6.2 8.1e-184 612.6 6.2 1.1 1 0 0 1 1 1 1 Myosin head (motor domain) RsgA_GTPase PF03193.16 CCF73982.1 - 0.0013 18.7 0.0 0.017 15.0 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 CCF73982.1 - 0.024 14.9 0.0 0.11 12.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 CCF73982.1 - 0.12 12.8 0.1 4.7 7.6 0.0 3.4 3 0 0 3 3 3 0 RNA helicase AAA_16 PF13191.6 CCF73982.1 - 0.17 12.3 0.0 0.39 11.1 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain Retrotrans_gag PF03732.17 CCF73983.1 - 0.14 12.4 0.2 0.65 10.3 0.0 2.1 2 0 0 2 2 2 0 Retrotransposon gag protein Exo_endo_phos PF03372.23 CCF73984.1 - 5.7e-14 52.2 0.0 1e-12 48.1 0.0 2.6 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family TraN PF06986.11 CCF73984.1 - 0.021 14.5 0.2 0.045 13.5 0.2 1.4 1 0 0 1 1 1 0 Type-1V conjugative transfer system mating pair stabilisation RRM_1 PF00076.22 CCF73985.1 - 3.2e-53 177.5 0.4 6.7e-18 64.3 0.0 3.2 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF73985.1 - 9.4e-09 34.9 0.8 0.013 15.0 0.0 3.7 3 1 1 4 4 4 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF73985.1 - 4.9e-08 33.0 0.6 0.002 18.2 0.1 3.4 3 0 0 3 3 3 2 RNA recognition motif WW PF00397.26 CCF73985.1 - 1e-07 31.9 0.9 2e-07 31.0 0.9 1.5 1 0 0 1 1 1 1 WW domain RNA_bind PF08675.11 CCF73985.1 - 8.6e-07 28.9 0.0 0.17 11.9 0.0 3.6 3 1 0 3 3 3 2 RNA binding domain Nup35_RRM PF05172.13 CCF73985.1 - 7.7e-05 22.6 0.2 0.029 14.3 0.0 3.2 3 0 0 3 3 3 1 Nup53/35/40-type RNA recognition motif RRM_occluded PF16842.5 CCF73985.1 - 0.0014 18.5 0.4 1.5 8.7 0.0 2.8 3 0 0 3 3 3 2 Occluded RNA-recognition motif DUF4904 PF16247.5 CCF73985.1 - 0.016 15.0 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4904) GMC_oxred_C PF05199.13 CCF73985.1 - 0.058 13.9 0.0 0.11 13.0 0.0 1.4 1 0 0 1 1 1 0 GMC oxidoreductase RNB PF00773.19 CCF73986.1 - 1.1e-95 320.8 1.1 1.5e-95 320.3 1.1 1.2 1 0 0 1 1 1 1 RNB domain OB_Dis3 PF17849.1 CCF73986.1 - 4.4e-18 65.1 0.0 9.7e-18 64.0 0.0 1.6 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) CSD2 PF17876.1 CCF73986.1 - 1.2e-06 28.6 0.2 1.7e-05 24.9 0.0 2.6 2 0 0 2 2 2 1 Cold shock domain Rrp44_CSD1 PF17216.3 CCF73986.1 - 0.00047 19.9 0.0 0.0012 18.6 0.0 1.6 1 0 0 1 1 1 1 Rrp44-like cold shock domain OB_RNB PF08206.11 CCF73986.1 - 0.14 11.9 0.1 4.2 7.1 0.0 2.5 2 0 0 2 2 2 0 Ribonuclease B OB domain Ribosomal_L29e PF01779.17 CCF73987.1 - 0.013 15.8 0.6 0.013 15.8 0.6 1.6 2 0 0 2 2 2 0 Ribosomal L29e protein family Ribosomal_S13_N PF08069.12 CCF73988.1 - 8.6e-29 99.4 1.9 1.4e-28 98.7 1.9 1.4 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 CCF73988.1 - 6e-13 48.8 0.8 1e-12 48.1 0.8 1.4 1 0 0 1 1 1 1 Ribosomal protein S15 MMR_HSR1_Xtn PF16897.5 CCF73989.1 - 6.3e-36 122.6 0.0 1.3e-35 121.6 0.0 1.6 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 CCF73989.1 - 2.9e-20 72.5 0.0 5.5e-20 71.6 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 CCF73989.1 - 1.3e-14 54.0 0.0 2.3e-14 53.2 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 CCF73989.1 - 7.3e-13 48.3 0.0 1.2e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF73989.1 - 8.4e-05 22.7 0.0 0.042 13.9 0.0 2.4 1 1 1 2 2 2 2 Dynamin family MCM PF00493.23 CCF73989.1 - 0.0072 15.5 0.0 0.013 14.6 0.0 1.4 1 0 0 1 1 1 1 MCM P-loop domain MeaB PF03308.16 CCF73989.1 - 0.014 14.4 0.0 0.031 13.2 0.0 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 CCF73989.1 - 0.033 14.6 0.0 0.06 13.7 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AIG1 PF04548.16 CCF73989.1 - 0.04 13.2 0.0 0.062 12.6 0.0 1.3 1 0 0 1 1 1 0 AIG1 family AAA_28 PF13521.6 CCF73989.1 - 0.1 12.9 0.2 0.18 12.0 0.2 1.4 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 CCF73989.1 - 0.14 12.4 0.0 0.48 10.7 0.0 1.9 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Flavokinase PF01687.17 CCF73990.1 - 2e-21 76.4 0.0 4.4e-21 75.3 0.0 1.6 1 0 0 1 1 1 1 Riboflavin kinase HSP70 PF00012.20 CCF73991.1 - 6e-16 57.8 0.8 1.1e-12 47.0 0.1 3.3 3 1 1 4 4 4 2 Hsp70 protein TPR_8 PF13181.6 CCF73991.1 - 1.3e-05 25.1 4.9 0.00038 20.5 1.0 3.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 CCF73991.1 - 0.0012 18.8 4.4 0.0056 16.7 0.1 3.8 3 1 0 3 3 3 1 Tetratricopeptide repeat SPO22 PF08631.10 CCF73991.1 - 0.0091 15.5 3.3 0.026 14.0 2.4 2.2 1 1 1 2 2 2 1 Meiosis protein SPO22/ZIP4 like TPR_12 PF13424.6 CCF73991.1 - 0.016 15.5 0.1 0.17 12.2 0.1 2.5 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_1 PF00515.28 CCF73991.1 - 0.032 14.1 8.4 0.16 11.9 0.3 4.0 3 1 0 3 3 3 0 Tetratricopeptide repeat DUF4363 PF14276.6 CCF73991.1 - 0.25 11.5 10.9 0.053 13.6 2.7 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4363) Fis1_TPR_C PF14853.6 CCF73991.1 - 0.94 9.6 6.3 0.64 10.1 0.1 3.2 4 0 0 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat DEAD PF00270.29 CCF73992.1 - 2.4e-45 154.5 0.0 5e-45 153.4 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF73992.1 - 3.8e-26 91.6 0.0 7e-24 84.3 0.0 3.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DBP10CT PF08147.12 CCF73992.1 - 1.2e-07 31.9 2.3 2.8e-07 30.7 2.3 1.6 1 0 0 1 1 1 1 DBP10CT (NUC160) domain ERCC3_RAD25_C PF16203.5 CCF73992.1 - 0.00022 20.5 0.0 0.00051 19.3 0.0 1.6 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase CH PF00307.31 CCF73992.1 - 0.016 15.4 0.0 0.043 14.0 0.0 1.7 1 0 0 1 1 1 0 Calponin homology (CH) domain GTP_EFTU PF00009.27 CCF73993.1 - 4.7e-32 111.1 3.1 7e-31 107.3 3.1 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 CCF73993.1 - 1.1e-11 44.8 0.6 1.1e-11 44.8 0.6 4.5 4 1 0 4 4 4 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 CCF73993.1 - 4.3e-09 36.5 0.6 1.4e-08 34.8 0.6 2.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 CCF73993.1 - 2.4e-05 24.5 0.1 0.00023 21.4 0.1 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 CCF73993.1 - 0.0004 19.9 1.2 0.00097 18.6 0.2 2.2 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit PduV-EutP PF10662.9 CCF73993.1 - 0.00052 19.8 0.9 0.00052 19.8 0.9 3.2 3 1 0 3 3 3 1 Ethanolamine utilisation - propanediol utilisation Arf PF00025.21 CCF73993.1 - 0.0022 17.5 0.4 0.0061 16.0 0.1 2.0 2 0 0 2 2 2 1 ADP-ribosylation factor family Band_7 PF01145.25 CCF73994.1 - 1.3e-23 83.9 0.2 1.3e-23 83.9 0.2 2.1 3 1 0 3 3 3 1 SPFH domain / Band 7 family Band_7_C PF16200.5 CCF73994.1 - 4.9e-23 81.0 1.4 9.7e-23 80.0 1.4 1.5 1 0 0 1 1 1 1 C-terminal region of band_7 Band_7_1 PF13421.6 CCF73994.1 - 0.011 15.4 0.1 0.039 13.7 0.0 1.9 3 0 0 3 3 3 0 SPFH domain-Band 7 family Flot PF15975.5 CCF73994.1 - 1.5 9.1 10.1 0.59 10.3 5.2 2.2 1 1 1 2 2 2 0 Flotillin DUF4972 PF16342.5 CCF73996.1 - 0.072 12.8 4.4 0.26 11.0 2.1 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4972) Ribosomal_L21p PF00829.21 CCF73997.1 - 6.1e-23 81.0 0.1 8.4e-23 80.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein ORC_WH_C PF18137.1 CCF73998.1 - 0.41 10.7 2.5 0.54 10.3 0.5 1.9 2 0 0 2 2 2 0 Origin recognition complex winged helix C-terminal DUF5082 PF16888.5 CCF73998.1 - 0.64 10.3 6.1 2.7 8.3 0.6 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) Cas6b_C PF17262.2 CCF74001.1 - 0.87 9.7 8.3 1.8 8.7 0.6 2.9 1 1 2 3 3 3 0 Cas6b C-terminal domain HCBP_related PF06594.11 CCF74002.1 - 0.077 12.9 2.8 15 5.6 0.0 3.7 3 0 0 3 3 3 0 Haemolysin-type calcium binding protein related domain Ldh_1_C PF02866.18 CCF74003.1 - 0.0064 16.4 0.1 0.008 16.1 0.1 1.1 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain DUF22 PF01629.16 CCF74003.1 - 0.033 13.9 1.6 0.069 12.8 0.1 2.1 2 1 1 3 3 3 0 Domain of unknown function DUF22 Cas6b_C PF17262.2 CCF74204.1 - 0.4 10.8 7.2 1.6 8.9 0.6 2.8 1 1 1 2 2 2 0 Cas6b C-terminal domain DUF1664 PF07889.12 CCF74204.1 - 0.72 9.9 5.9 4.1 7.5 1.6 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) FlaC_arch PF05377.11 CCF74204.1 - 1.2 9.6 6.7 14 6.2 0.7 3.9 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Romo1 PF10247.9 CCF74206.1 - 0.01 16.2 1.8 8.5 6.8 0.0 3.4 4 0 0 4 4 4 2 Reactive mitochondrial oxygen species modulator 1 TRA-1_regulated PF02343.16 CCF74206.1 - 0.019 15.0 1.2 0.23 11.5 0.2 2.2 2 0 0 2 2 2 0 TRA-1 regulated protein R03H10.4 PRMT5 PF05185.16 CCF74208.1 - 9.2e-40 136.3 0.0 2.1e-39 135.2 0.0 1.5 2 0 0 2 2 2 1 PRMT5 arginine-N-methyltransferase PRMT5_C PF17286.2 CCF74208.1 - 8.3e-36 123.5 1.3 1.4e-35 122.8 1.3 1.3 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PRMT5_TIM PF17285.2 CCF74208.1 - 2.8e-11 43.1 0.3 8.7e-11 41.5 0.3 1.8 1 1 0 1 1 1 1 PRMT5 TIM barrel domain Methyltransf_25 PF13649.6 CCF74208.1 - 0.005 17.5 0.1 0.016 15.9 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Sec23_trunk PF04811.15 CCF74209.1 - 4.7e-52 177.0 0.1 1e-51 175.9 0.1 1.6 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 CCF74209.1 - 6.2e-23 81.4 1.5 1.6e-22 80.0 0.0 2.5 2 0 0 2 2 2 1 Sec23/Sec24 beta-sandwich domain Sec23_helical PF04815.15 CCF74209.1 - 2.4e-17 62.6 0.1 9.3e-17 60.7 0.1 2.1 1 1 0 1 1 1 1 Sec23/Sec24 helical domain zf-Sec23_Sec24 PF04810.15 CCF74209.1 - 1.9e-13 50.2 2.6 3.9e-13 49.2 2.6 1.6 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Gelsolin PF00626.22 CCF74209.1 - 1.4e-06 28.1 0.0 5.6e-06 26.2 0.0 2.0 2 0 0 2 2 2 1 Gelsolin repeat Vps36-NZF-N PF16988.5 CCF74209.1 - 0.12 11.8 0.5 0.33 10.4 0.5 1.7 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Fe-S_assembly PF04384.13 CCF74211.1 - 5.8e-19 68.5 0.1 7.1e-19 68.2 0.1 1.1 1 0 0 1 1 1 1 Iron-sulphur cluster assembly COX2 PF00116.20 CCF74212.1 - 0.014 15.3 0.8 0.024 14.5 0.2 1.7 2 0 0 2 2 2 0 Cytochrome C oxidase subunit II, periplasmic domain TFCD_C PF12612.8 CCF74213.1 - 0.00075 19.4 6.9 0.013 15.3 0.1 4.9 5 1 0 5 5 5 1 Tubulin folding cofactor D C terminal Tape_meas_lam_C PF09718.10 CCF74213.1 - 0.49 10.6 2.1 3.8 7.7 0.4 3.0 2 0 0 2 2 2 0 Lambda phage tail tape-measure protein (Tape_meas_lam_C) ComR_TPR PF18710.1 CCF74213.1 - 9.3 5.7 8.8 3.3 7.2 0.9 3.7 3 0 0 3 3 3 0 ComR tetratricopeptide Urm1 PF09138.11 CCF74215.1 - 7.6e-15 55.0 0.0 1.2e-14 54.4 0.0 1.3 1 1 0 1 1 1 1 Urm1 (Ubiquitin related modifier) MFS_1 PF07690.16 CCF74216.1 - 8.8e-22 77.5 0.7 8.8e-22 77.5 0.7 2.2 2 1 0 2 2 2 1 Major Facilitator Superfamily DUF4834 PF16118.5 CCF74216.1 - 0.051 14.5 0.0 0.051 14.5 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4834) CobT PF06213.12 CCF74216.1 - 1.2 8.5 7.7 1.7 8.0 7.7 1.1 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Hydrolase_4 PF12146.8 CCF74217.1 - 2.6e-37 128.4 0.0 3.9e-37 127.8 0.0 1.2 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 CCF74217.1 - 2.2e-08 34.1 0.0 1.6e-07 31.3 0.0 1.9 1 1 0 2 2 2 1 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CCF74217.1 - 3.8e-06 27.7 0.0 5.9e-06 27.0 0.0 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase family PGAP1 PF07819.13 CCF74217.1 - 0.002 17.9 0.0 0.0042 16.8 0.0 1.5 1 0 0 1 1 1 1 PGAP1-like protein Abhydrolase_5 PF12695.7 CCF74217.1 - 0.0072 16.1 0.0 0.014 15.2 0.0 1.4 1 0 0 1 1 1 1 Alpha/beta hydrolase family LIDHydrolase PF10230.9 CCF74217.1 - 0.024 14.2 0.0 0.041 13.4 0.0 1.3 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase Abhydrolase_3 PF07859.13 CCF74217.1 - 0.064 13.1 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 alpha/beta hydrolase fold DUF676 PF05057.14 CCF74217.1 - 0.087 12.3 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Putative serine esterase (DUF676) Peptidase_S9 PF00326.21 CCF74217.1 - 0.15 11.5 0.0 0.98 8.9 0.0 2.0 2 0 0 2 2 2 0 Prolyl oligopeptidase family RNA_pol_L_2 PF13656.6 CCF74218.1 - 1.4e-20 72.8 0.0 1.8e-20 72.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Prefoldin PF02996.17 CCF74219.1 - 1.3e-16 60.6 0.0 1.6e-16 60.3 0.0 1.1 1 0 0 1 1 1 1 Prefoldin subunit Tropomyosin PF00261.20 CCF74219.1 - 0.11 11.9 0.5 4.6 6.5 0.0 2.0 2 0 0 2 2 2 0 Tropomyosin IMCp PF12314.8 CCF74220.1 - 1e-13 51.3 27.3 1e-13 51.3 27.3 5.1 1 1 3 4 4 4 3 Inner membrane complex protein Ribosomal_L22 PF00237.19 CCF74224.1 - 2.3e-34 117.7 0.1 3.1e-34 117.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e Noelin-1 PF12308.8 CCF74225.1 - 0.078 13.0 0.6 13 5.8 0.1 2.4 2 0 0 2 2 2 0 Neurogenesis glycoprotein STIMATE PF12400.8 CCF74226.1 - 8.3e-20 71.6 4.5 8.3e-20 71.6 4.5 2.5 2 1 0 2 2 2 1 STIMATE family Vps55 PF04133.14 CCF74226.1 - 0.12 12.3 3.7 1.2 9.2 0.1 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 55 EF-hand_1 PF00036.32 CCF74227.1 - 1.5e-32 108.7 11.0 2.7e-09 35.9 0.3 5.2 5 0 0 5 5 5 5 EF hand EF-hand_8 PF13833.6 CCF74227.1 - 5.9e-30 102.9 8.9 1.3e-14 53.7 0.4 4.0 2 1 2 4 4 4 4 EF-hand domain pair EF-hand_7 PF13499.6 CCF74227.1 - 1.8e-28 98.8 3.9 1.2e-12 48.1 1.8 3.0 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 CCF74227.1 - 2.3e-23 80.1 9.1 1e-08 34.4 0.2 5.0 4 1 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 CCF74227.1 - 3.4e-19 67.4 10.9 1e-05 24.8 0.3 5.2 5 0 0 5 5 5 4 EF hand EF-hand_9 PF14658.6 CCF74227.1 - 2.6e-11 43.7 0.6 2.8e-07 30.8 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 CCF74227.1 - 8e-07 29.0 0.7 0.0024 17.8 0.1 2.4 1 1 0 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 CCF74227.1 - 5.3e-06 27.2 0.0 0.00095 20.0 0.0 2.1 1 1 1 2 2 2 1 EF-hand domain UPF0154 PF03672.13 CCF74227.1 - 5.4e-05 23.1 0.0 0.036 14.1 0.0 2.8 3 1 0 3 3 2 1 Uncharacterised protein family (UPF0154) SPARC_Ca_bdg PF10591.9 CCF74227.1 - 6.1e-05 23.3 0.1 0.44 10.9 0.1 2.2 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region RNA_pol_Rpb4 PF03874.16 CCF74227.1 - 0.00014 22.2 0.6 0.028 14.7 0.1 2.4 2 0 0 2 2 2 1 RNA polymerase Rpb4 Dockerin_1 PF00404.18 CCF74227.1 - 0.00056 20.1 1.2 0.035 14.3 0.0 2.7 2 1 1 3 3 3 1 Dockerin type I domain TerB PF05099.13 CCF74227.1 - 0.0018 18.2 0.1 0.09 12.7 0.0 2.3 2 1 0 2 2 2 1 Tellurite resistance protein TerB DUF3349 PF11829.8 CCF74227.1 - 0.0061 17.3 0.4 2.3 9.1 0.0 2.8 2 1 1 3 3 3 1 Protein of unknown function (DUF3349) MotA_activ PF09114.10 CCF74227.1 - 0.027 14.6 0.1 0.34 11.1 0.0 2.1 2 0 0 2 2 2 0 Transcription factor MotA, activation domain Caleosin PF05042.13 CCF74227.1 - 0.032 14.1 1.0 1.4 8.8 0.0 2.9 2 1 1 3 3 3 0 Caleosin related protein DUF1811 PF08838.10 CCF74227.1 - 0.062 13.5 0.0 11 6.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1811) AAA_assoc_C PF09821.9 CCF74227.1 - 0.092 13.3 0.3 8.4 7.0 0.1 2.4 2 1 0 2 2 2 0 C-terminal AAA-associated domain SUB1_ProdP9 PF18213.1 CCF74227.1 - 0.093 12.6 1.4 3.8 7.4 0.1 2.7 1 1 2 3 3 3 0 SUB1 protease Prodomain ProdP9 IP_trans PF02121.18 CCF74228.1 - 2.6e-59 200.8 0.0 6.5e-59 199.5 0.0 1.6 1 0 0 1 1 1 1 Phosphatidylinositol transfer protein PH PF00169.29 CCF74228.1 - 1.4e-11 44.8 0.0 3.9e-11 43.4 0.0 1.7 1 0 0 1 1 1 1 PH domain NGP1NT PF08153.12 CCF74229.1 - 4.7e-36 123.8 0.5 7.7e-36 123.1 0.5 1.3 1 0 0 1 1 1 1 NGP1NT (NUC091) domain MMR_HSR1 PF01926.23 CCF74229.1 - 1.3e-16 60.6 0.0 5.1e-15 55.6 0.0 2.7 2 1 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF74229.1 - 5.9e-08 32.4 0.0 8.4e-06 25.4 0.0 2.3 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF74229.1 - 0.0084 16.2 0.3 0.35 10.9 0.0 3.2 2 1 1 3 3 3 1 Dynamin family RsgA_GTPase PF03193.16 CCF74229.1 - 0.011 15.6 0.1 0.14 12.1 0.0 2.3 1 1 1 2 2 2 0 RsgA GTPase GTP_EFTU PF00009.27 CCF74229.1 - 0.046 13.3 0.1 1 8.9 0.0 2.5 2 1 1 3 3 3 0 Elongation factor Tu GTP binding domain AIG1 PF04548.16 CCF74229.1 - 0.054 12.8 0.0 0.12 11.7 0.0 1.5 1 0 0 1 1 1 0 AIG1 family SusD-like_3 PF14322.6 CCF74229.1 - 0.15 12.4 0.0 0.25 11.6 0.0 1.3 1 0 0 1 1 1 0 Starch-binding associating with outer membrane Actin PF00022.19 CCF74230.1 - 9e-73 245.2 0.0 2.8e-35 121.7 0.0 2.2 1 1 1 2 2 2 2 Actin DUF3626 PF12294.8 CCF74230.1 - 0.19 10.7 0.0 0.44 9.6 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3626) RPA43_OB PF17875.1 CCF74232.1 - 0.096 13.3 0.0 0.19 12.3 0.0 1.5 1 0 0 1 1 1 0 RPA43 OB domain in RNA Pol I RRF PF01765.19 CCF74233.1 - 1.2e-17 64.4 6.3 1.2e-17 64.4 6.3 1.4 2 0 0 2 2 2 1 Ribosome recycling factor DUF247 PF03140.15 CCF74233.1 - 0.005 16.1 0.5 0.0057 15.9 0.5 1.3 1 0 0 1 1 1 1 Plant protein of unknown function Bac_DNA_binding PF00216.21 CCF74233.1 - 0.056 13.7 0.5 0.23 11.7 0.1 2.3 1 1 2 3 3 3 0 Bacterial DNA-binding protein Maelstrom PF13017.6 CCF74233.1 - 0.057 13.1 3.0 0.06 13.0 0.6 2.0 1 1 1 2 2 2 0 piRNA pathway germ-plasm component DUF2321 PF10083.9 CCF74233.1 - 0.084 12.5 1.5 0.12 12.0 0.9 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) MnmE_helical PF12631.7 CCF74233.1 - 0.2 11.8 6.6 0.42 10.7 6.6 1.5 1 1 0 1 1 1 0 MnmE helical domain Macro PF01661.21 CCF74234.1 - 4.1e-06 26.8 0.0 7.8e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 Macro domain CRAL_TRIO PF00650.20 CCF74234.1 - 0.0052 16.5 0.1 0.018 14.7 0.1 1.9 1 1 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 CCF74234.1 - 0.076 13.2 0.3 0.24 11.6 0.1 1.8 2 0 0 2 2 2 0 Divergent CRAL/TRIO domain DUF866 PF05907.13 CCF74235.1 - 2e-29 102.5 0.0 2.4e-29 102.3 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF866) Guanylate_cyc PF00211.20 CCF74236.1 - 4.3e-79 264.4 0.0 2.7e-43 147.7 0.0 2.4 2 0 0 2 2 2 2 Adenylate and Guanylate cyclase catalytic domain PhoLip_ATPase_C PF16212.5 CCF74236.1 - 8.9e-25 87.9 2.6 8.9e-25 87.9 2.6 4.1 4 2 0 4 4 4 1 Phospholipid-translocating P-type ATPase C-terminal E1-E2_ATPase PF00122.20 CCF74236.1 - 2.5e-05 23.9 0.1 2.5e-05 23.9 0.1 2.5 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 CCF74236.1 - 0.0088 16.3 0.0 0.047 14.0 0.0 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF1053 PF06327.14 CCF74236.1 - 0.21 12.1 0.0 17 6.1 0.0 2.3 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1053) WD40 PF00400.32 CCF74237.1 - 7.8e-08 32.9 3.0 0.00012 22.8 0.1 3.2 3 0 0 3 3 3 2 WD domain, G-beta repeat WD40_like PF17005.5 CCF74237.1 - 0.00067 19.1 0.0 0.53 9.6 0.0 2.2 1 1 1 2 2 2 2 WD40-like domain ELMO_CED12 PF04727.13 CCF74238.1 - 2.6e-22 79.8 2.2 9.2e-22 78.0 1.8 2.1 2 1 0 2 2 2 1 ELMO/CED-12 family MCM_N PF14551.6 CCF74238.1 - 0.095 13.3 0.1 0.26 11.9 0.1 1.7 1 0 0 1 1 1 0 MCM N-terminal domain TPR_2 PF07719.17 CCF74240.1 - 3.2e-05 23.7 4.9 0.22 11.8 0.0 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat EST1_DNA_bind PF10373.9 CCF74240.1 - 0.013 15.0 1.7 0.064 12.7 0.0 2.7 1 1 1 2 2 2 0 Est1 DNA/RNA binding domain TPR_14 PF13428.6 CCF74240.1 - 0.027 15.3 0.0 24 6.1 0.0 4.1 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 CCF74240.1 - 0.033 14.6 1.2 7.3 7.2 0.0 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat Ig_J_chain PF15097.6 CCF74240.1 - 0.11 12.4 0.2 0.23 11.3 0.2 1.5 1 0 0 1 1 1 0 Immunoglobulin J chain TPR_1 PF00515.28 CCF74240.1 - 0.24 11.3 5.1 14 5.7 0.0 4.2 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF1168 PF06658.12 CCF74241.1 - 1.8e-22 79.6 7.3 2.3e-22 79.3 7.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1168) XRN_M PF17846.1 CCF74241.1 - 0.025 13.6 1.2 0.026 13.5 1.2 1.1 1 0 0 1 1 1 0 Xrn1 helical domain PDCD7 PF16021.5 CCF74241.1 - 0.16 11.1 9.0 0.2 10.7 9.0 1.1 1 0 0 1 1 1 0 Programmed cell death protein 7 Ribosomal_S9 PF00380.19 CCF74242.1 - 1.1e-29 103.4 0.0 2.1e-29 102.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S9/S16 CLPTM1 PF05602.12 CCF74244.1 - 5.3e-77 259.7 9.7 6.9e-77 259.3 9.7 1.1 1 0 0 1 1 1 1 Cleft lip and palate transmembrane protein 1 (CLPTM1) PQ-loop PF04193.14 CCF74244.1 - 0.0055 16.5 9.9 0.011 15.4 0.1 3.3 3 1 1 4 4 4 2 PQ loop repeat DnaJ PF00226.31 CCF74245.1 - 3.5e-24 84.7 0.5 7.5e-24 83.6 0.5 1.6 1 0 0 1 1 1 1 DnaJ domain DUF1977 PF09320.11 CCF74245.1 - 1.6e-07 31.5 1.3 6.3e-07 29.6 1.3 2.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1977) LMP PF04778.12 CCF74245.1 - 0.015 15.2 1.0 0.027 14.4 1.0 1.3 1 0 0 1 1 1 0 LMP repeated region DUF5638 PF18688.1 CCF74245.1 - 0.018 15.4 1.1 0.07 13.5 1.1 1.9 1 1 1 2 2 2 0 Family of unknown function (DUF5638) TPR_2 PF07719.17 CCF74245.1 - 0.042 14.0 3.0 0.053 13.7 0.1 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat SPRY PF00622.28 CCF74246.1 - 3.2e-08 33.7 0.1 0.0007 19.7 0.0 2.6 3 0 0 3 3 3 2 SPRY domain Pkinase PF00069.25 CCF74248.1 - 1.2e-63 215.0 0.0 1.4e-63 214.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74248.1 - 1.3e-38 132.7 0.0 1.6e-38 132.5 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF74248.1 - 1.6e-05 24.4 0.0 1.9e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like DUF3791 PF12668.7 CCF74248.1 - 0.036 14.1 0.4 0.54 10.3 0.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3791) Seadorna_VP7 PF07387.11 CCF74248.1 - 0.072 12.1 0.0 0.12 11.4 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 APH PF01636.23 CCF74248.1 - 0.12 12.3 0.0 0.72 9.7 0.0 2.2 3 0 0 3 3 3 0 Phosphotransferase enzyme family DEAD PF00270.29 CCF74249.1 - 4.4e-38 130.8 0.0 9.3e-38 129.7 0.0 1.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74249.1 - 2.1e-28 98.9 0.0 1.2e-27 96.5 0.0 2.2 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74249.1 - 2.2e-06 27.8 0.0 4e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit A2M_recep PF07677.14 CCF74249.1 - 0.0075 16.9 0.0 4.3 8.1 0.0 2.4 2 0 0 2 2 2 2 A-macroglobulin receptor binding domain AAA_22 PF13401.6 CCF74249.1 - 0.12 12.7 0.1 0.33 11.2 0.1 1.8 1 1 0 1 1 1 0 AAA domain LSM PF01423.22 CCF74250.1 - 1.5e-17 63.0 0.4 2e-17 62.7 0.4 1.1 1 0 0 1 1 1 1 LSM domain DUF4087 PF13316.6 CCF74250.1 - 0.11 13.0 0.0 0.35 11.4 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF4087) HGTP_anticodon PF03129.20 CCF74251.1 - 1.4e-21 76.5 0.0 3.4e-21 75.2 0.0 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 CCF74251.1 - 9.3e-11 42.0 0.0 3.5e-10 40.1 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) DUF3896 PF13035.6 CCF74251.1 - 0.49 10.6 4.8 0.63 10.2 1.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3896) MutS_V PF00488.21 CCF74253.1 - 8.5e-57 192.2 4.9 2.5e-54 184.2 4.9 2.9 1 1 0 1 1 1 1 MutS domain V MutS_III PF05192.18 CCF74253.1 - 1.6e-22 80.7 0.1 3.8e-22 79.4 0.1 1.7 1 0 0 1 1 1 1 MutS domain III AAA_29 PF13555.6 CCF74253.1 - 0.0035 17.0 0.0 0.0089 15.8 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 CCF74253.1 - 0.0056 17.2 0.5 0.055 14.0 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_27 PF13514.6 CCF74253.1 - 0.006 16.2 0.0 0.012 15.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain Pico_P2A PF00947.19 CCF74253.1 - 0.16 12.0 0.1 0.16 12.0 0.1 2.0 2 0 0 2 2 2 0 Picornavirus core protein 2A Adeno_E3_CR1 PF02440.15 CCF74254.1 - 0.039 13.7 2.0 16 5.4 0.2 3.7 3 0 0 3 3 3 0 Adenovirus E3 region protein CR1 Peptidase_U4 PF03419.13 CCF74255.1 - 0.36 10.1 22.7 0.02 14.2 7.7 2.4 2 0 0 2 2 2 0 Sporulation factor SpoIIGA MFS_1 PF07690.16 CCF74255.1 - 7.4 5.4 33.2 3.7 6.4 11.5 2.1 1 1 1 2 2 2 0 Major Facilitator Superfamily Metallophos PF00149.28 CCF74256.1 - 6.6e-36 124.7 0.2 8.6e-36 124.4 0.2 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CCF74256.1 - 0.0088 16.2 0.0 0.013 15.8 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain HscB_4_cys PF18256.1 CCF74256.1 - 0.12 12.3 0.1 10 6.1 0.0 2.4 2 0 0 2 2 2 0 Co-chaperone HscB tetracysteine metal binding motif STPPase_N PF16891.5 CCF74256.1 - 0.15 12.5 0.1 0.3 11.6 0.1 1.5 1 0 0 1 1 1 0 Serine-threonine protein phosphatase N-terminal domain UPF0172 PF03665.13 CCF74257.1 - 2.2e-07 31.1 8.5 4.9e-07 30.0 0.0 4.0 4 1 1 5 5 5 1 Uncharacterised protein family (UPF0172) Rpn9_C PF18261.1 CCF74257.1 - 0.26 10.9 0.7 0.64 9.7 0.7 1.6 1 0 0 1 1 1 0 Rpn9 C-terminal helix ZapB PF06005.12 CCF74257.1 - 7.4 7.1 7.6 3.2 8.3 1.4 3.1 3 0 0 3 3 3 0 Cell division protein ZapB PP2C PF00481.21 CCF74258.1 - 1.1e-60 205.5 0.0 5e-50 170.5 0.0 2.4 2 1 0 2 2 2 2 Protein phosphatase 2C Ribosomal_S14 PF00253.21 CCF74259.1 - 3.4e-21 74.7 1.8 9.5e-21 73.3 0.9 2.1 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e Pyr_redox_2 PF07992.14 CCF74261.1 - 3.4e-06 26.5 0.1 1.8e-05 24.1 0.1 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CCF74261.1 - 0.093 13.3 0.2 3.5 8.3 0.0 2.9 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Urease_beta PF00699.20 CCF74262.1 - 0.047 13.7 0.0 0.069 13.2 0.0 1.3 1 0 0 1 1 1 0 Urease beta subunit DUF722 PF05263.11 CCF74262.1 - 0.11 12.8 0.0 0.3 11.3 0.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF722) FAST_1 PF06743.15 CCF74263.1 - 0.0016 18.3 0.3 0.12 12.3 0.0 3.9 3 1 1 4 4 4 2 FAST kinase-like protein, subdomain 1 ATP11 PF06644.11 CCF74264.1 - 1.3e-17 64.5 0.1 1.7e-17 64.1 0.1 1.2 1 0 0 1 1 1 1 ATP11 protein HC2 PF07382.11 CCF74266.1 - 3.7e-05 23.9 0.1 6e-05 23.2 0.1 1.2 1 0 0 1 1 1 1 Histone H1-like nucleoprotein HC2 SICA_C PF12879.7 CCF74266.1 - 0.17 11.9 0.1 15 5.6 0.0 2.5 1 1 1 2 2 2 0 SICA C-terminal inner membrane domain RuvX PF03652.15 CCF74267.1 - 0.022 15.1 0.0 0.45 10.9 0.0 2.6 2 1 0 2 2 2 0 Holliday junction resolvase ABC_tran PF00005.27 CCF74269.1 - 6.3e-28 98.0 0.0 1.3e-27 97.0 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CCF74269.1 - 4.3e-17 62.7 12.9 1.8e-16 60.6 12.9 1.9 1 1 0 1 1 1 1 ABC transporter transmembrane region AAA_29 PF13555.6 CCF74269.1 - 0.00052 19.7 0.3 0.00052 19.7 0.3 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_21 PF13304.6 CCF74269.1 - 0.0018 18.2 0.4 2.3 7.9 0.0 2.5 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CCF74269.1 - 0.002 17.9 0.2 0.57 9.8 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_24 PF13479.6 CCF74269.1 - 0.008 15.9 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CCF74269.1 - 0.0098 16.4 0.0 0.025 15.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 CCF74269.1 - 0.014 14.9 0.4 5.1 6.5 0.1 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 CCF74269.1 - 0.026 14.9 0.0 0.051 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain DUF87 PF01935.17 CCF74269.1 - 0.032 14.3 0.2 0.078 13.1 0.2 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain RsgA_GTPase PF03193.16 CCF74269.1 - 0.042 13.8 0.1 0.1 12.5 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 CCF74269.1 - 0.079 13.0 0.0 0.2 11.8 0.0 1.7 1 0 0 1 1 1 0 50S ribosome-binding GTPase G-alpha PF00503.20 CCF74269.1 - 0.08 12.1 0.0 0.15 11.2 0.0 1.4 1 0 0 1 1 1 0 G-protein alpha subunit FtsK_SpoIIIE PF01580.18 CCF74269.1 - 0.1 11.9 0.0 0.18 11.2 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_25 PF13481.6 CCF74269.1 - 0.17 11.4 0.0 0.45 10.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain GDI PF00996.18 CCF74274.1 - 2.6e-28 98.7 0.1 7.8e-21 74.1 0.0 3.1 2 1 0 2 2 2 2 GDP dissociation inhibitor WD40 PF00400.32 CCF74275.1 - 1.9e-22 79.1 8.3 0.0011 19.7 0.1 6.5 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF74275.1 - 1.2e-11 44.8 0.0 0.15 12.4 0.0 5.0 3 1 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain TFIID_NTD2 PF04494.15 CCF74275.1 - 2.2e-09 37.6 0.2 3.5e-09 37.0 0.2 1.3 1 0 0 1 1 1 1 WD40 associated region in TFIID subunit, NTD2 domain Ge1_WD40 PF16529.5 CCF74275.1 - 0.0078 15.2 0.0 31 3.4 0.0 3.9 4 0 0 4 4 4 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 CCF74275.1 - 0.011 14.4 0.0 0.63 8.6 0.0 2.8 3 0 0 3 3 3 0 Nucleoporin Nup120/160 Nbas_N PF15492.6 CCF74275.1 - 0.042 13.2 0.0 2.5 7.4 0.0 2.9 3 0 0 3 3 3 0 Neuroblastoma-amplified sequence, N terminal TerB_C PF15615.6 CCF74275.1 - 0.09 13.1 0.0 0.16 12.3 0.0 1.3 1 0 0 1 1 1 0 TerB-C domain Ribosomal_L19e PF01280.20 CCF74277.1 - 0.0013 18.8 2.4 0.002 18.2 1.0 2.0 2 0 0 2 2 2 1 Ribosomal protein L19e Syntaxin_2 PF14523.6 CCF74277.1 - 0.13 12.7 4.3 0.91 9.9 4.3 2.4 1 1 0 1 1 1 0 Syntaxin-like protein zf-A20 PF01754.16 CCF74278.1 - 4.1e-11 42.6 8.8 4.1e-11 42.6 8.8 2.3 3 0 0 3 3 3 1 A20-like zinc finger zf-AN1 PF01428.16 CCF74278.1 - 6.4e-09 35.8 7.5 6.4e-09 35.8 7.5 2.4 2 1 0 2 2 2 1 AN1-like Zinc finger TnsD PF15978.5 CCF74278.1 - 0.13 11.3 0.3 0.18 10.7 0.3 1.2 1 0 0 1 1 1 0 Tn7-like transposition protein D Alba PF01918.21 CCF74279.1 - 5.4e-08 32.5 0.2 1.4e-07 31.2 0.2 1.8 2 0 0 2 2 2 1 Alba RecG_wedge PF17191.4 CCF74279.1 - 0.021 14.4 0.1 0.027 14.1 0.1 1.2 1 0 0 1 1 1 0 RecG wedge domain CTP_transf_like PF01467.26 CCF74280.1 - 3.7e-05 23.9 0.0 6.4e-05 23.2 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase-like VPS9 PF02204.18 CCF74281.1 - 0.00073 19.7 0.6 0.002 18.3 0.2 1.9 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain VirE_N PF08800.10 CCF74281.1 - 0.11 12.6 0.0 0.43 10.7 0.0 1.9 3 0 0 3 3 3 0 VirE N-terminal domain COPI_assoc PF08507.10 CCF74282.1 - 0.083 12.9 12.7 0.13 12.3 12.7 1.3 1 0 0 1 1 1 0 COPI associated protein SNRNP27 PF08648.12 CCF74283.1 - 1.2e-21 76.5 0.8 2.9e-21 75.3 0.8 1.7 1 0 0 1 1 1 1 U4/U6.U5 small nuclear ribonucleoproteins SNF2_N PF00176.23 CCF74284.1 - 2.5e-40 138.3 0.0 6.3e-40 137.0 0.0 1.7 1 1 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF74284.1 - 1.5e-16 60.7 0.0 2e-15 57.1 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74284.1 - 1.9e-06 28.0 0.0 5.2e-06 26.6 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SWI2_SNF2 PF18766.1 CCF74284.1 - 0.0017 18.1 0.0 0.0045 16.7 0.0 1.8 1 0 0 1 1 1 1 SWI2/SNF2 ATPase DEAD PF00270.29 CCF74284.1 - 0.0037 17.1 0.0 0.013 15.3 0.0 2.0 1 1 0 1 1 1 1 DEAD/DEAH box helicase 14-3-3 PF00244.20 CCF74285.1 - 5.1e-97 323.7 7.3 5.8e-97 323.6 7.3 1.0 1 0 0 1 1 1 1 14-3-3 protein TRAPP PF04051.16 CCF74286.1 - 8e-20 71.1 0.3 8.9e-20 70.9 0.3 1.1 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component Histone PF00125.24 CCF74287.1 - 2.4e-17 63.5 0.0 3.1e-17 63.2 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 CCF74287.1 - 8.2e-12 44.7 0.4 1.5e-11 43.8 0.4 1.4 1 0 0 1 1 1 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 CCF74287.1 - 1.4e-05 25.3 0.0 2e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Fcf1 PF04900.12 CCF74288.1 - 1.2e-32 112.2 4.2 1.2e-32 112.2 4.2 1.4 2 0 0 2 2 2 1 Fcf1 PIN_9 PF18477.1 CCF74288.1 - 1.5e-12 47.8 0.0 2.9e-12 46.9 0.0 1.4 2 0 0 2 2 2 1 PIN like domain DEAD PF00270.29 CCF74289.1 - 1.3e-42 145.5 0.0 1.3e-42 145.5 0.0 1.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74289.1 - 3.4e-23 82.1 0.4 2.6e-22 79.3 0.3 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain USP7_ICP0_bdg PF12436.8 CCF74289.1 - 0.022 14.1 0.2 0.55 9.5 0.2 2.4 1 1 0 1 1 1 0 ICP0-binding domain of Ubiquitin-specific protease 7 CMS1 PF14617.6 CCF74289.1 - 0.042 13.2 0.1 0.042 13.2 0.1 1.9 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit ERCC3_RAD25_C PF16203.5 CCF74289.1 - 0.23 10.7 1.3 0.28 10.3 0.1 1.7 2 0 0 2 2 2 0 ERCC3/RAD25/XPB C-terminal helicase Pox_mRNA-cap PF03341.13 CCF74289.1 - 1.1 8.4 3.7 0.36 10.1 0.4 1.7 2 0 0 2 2 2 0 Poxvirus mRNA capping enzyme, small subunit zf-RING_2 PF13639.6 CCF74291.1 - 1.6e-07 31.5 6.9 1.6e-07 31.5 6.9 3.8 3 0 0 3 3 3 1 Ring finger domain TSP_1 PF00090.19 CCF74291.1 - 7.8e-05 22.8 36.5 0.0003 21.0 1.0 5.4 5 0 0 5 5 5 3 Thrombospondin type 1 domain zf-RING_11 PF17123.5 CCF74291.1 - 0.00016 21.3 6.6 0.0006 19.5 6.6 2.1 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 CCF74291.1 - 0.00029 21.0 3.3 0.00029 21.0 3.3 3.8 3 0 0 3 3 3 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 CCF74291.1 - 0.0075 16.1 7.2 0.062 13.2 7.2 2.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF74291.1 - 1.1 9.1 13.9 0.043 13.7 5.9 3.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 CCF74291.1 - 1.6 8.8 7.5 1.7 8.7 2.1 3.0 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Trnau1ap PF17654.1 CCF74292.1 - 0.063 14.1 0.3 0.2 12.5 0.0 1.9 2 0 0 2 2 2 0 Selenocysteine tRNA 1 associated proteins DUF5090 PF17009.5 CCF74293.1 - 0.069 13.1 3.7 0.15 12.0 3.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) FUSC_2 PF13515.6 CCF74293.1 - 1.4 9.1 13.2 0.18 11.9 8.2 2.0 1 1 1 2 2 2 0 Fusaric acid resistance protein-like ASFV_J13L PF05568.11 CCF74293.1 - 9.2 6.0 10.8 0.52 10.0 0.5 2.5 2 1 1 3 3 3 0 African swine fever virus J13L protein Fer4 PF00037.27 CCF74294.1 - 0.14 12.1 1.9 0.34 10.8 0.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain DnaJ_C PF01556.18 CCF74297.1 - 4.1e-37 127.5 0.1 6.7e-37 126.9 0.1 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CCF74297.1 - 3.4e-26 91.1 3.3 6.6e-26 90.2 3.3 1.5 1 0 0 1 1 1 1 DnaJ domain AHD PF17793.1 CCF74297.1 - 0.17 11.7 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 ANC1 homology domain (AHD) Leu_Phe_trans PF03588.14 CCF74298.1 - 7.6e-17 61.4 0.2 9.9e-16 57.7 0.2 2.2 1 1 0 1 1 1 1 Leucyl/phenylalanyl-tRNA protein transferase NopRA1 PF16201.5 CCF74299.1 - 1.6e-06 27.9 0.7 1.6e-06 27.9 0.7 1.9 2 0 0 2 2 2 1 Nucleolar pre-ribosomal-associated protein 1 RNR_Alpha PF17975.1 CCF74299.1 - 0.087 13.3 0.0 5.5 7.5 0.0 2.5 2 0 0 2 2 2 0 Ribonucleotide reductase alpha domain zf-RING_2 PF13639.6 CCF74299.1 - 3.3 8.1 7.0 11 6.4 7.0 1.9 1 0 0 1 1 1 0 Ring finger domain s48_45 PF07422.13 CCF74300.1 - 3.7e-19 69.3 1.4 2.2e-09 37.9 0.0 3.2 3 0 0 3 3 3 2 Sexual stage antigen s48/45 domain KH_8 PF17903.1 CCF74301.1 - 2.3e-31 107.7 0.6 1.1e-30 105.6 0.0 2.3 2 0 0 2 2 2 1 Krr1 KH1 domain KH_1 PF00013.29 CCF74301.1 - 0.0029 17.4 0.0 0.0072 16.1 0.0 1.7 1 0 0 1 1 1 1 KH domain DUF3644 PF12358.8 CCF74301.1 - 4.9 7.7 9.3 58 4.3 9.3 2.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3644) Vac_Fusion PF02346.16 CCF74302.1 - 0.0091 15.6 0.5 0.55 9.9 0.0 2.5 2 0 0 2 2 2 1 Chordopoxvirus multifunctional envelope protein A27 Synaptobrevin PF00957.21 CCF74302.1 - 0.0098 15.7 0.9 0.0098 15.7 0.9 2.2 2 0 0 2 2 2 1 Synaptobrevin SlyX PF04102.12 CCF74302.1 - 0.14 12.8 0.3 0.14 12.8 0.3 3.2 5 0 0 5 5 5 0 SlyX MscS_porin PF12795.7 CCF74302.1 - 0.83 9.2 10.3 0.044 13.3 2.0 2.6 3 0 0 3 3 3 0 Mechanosensitive ion channel porin domain ABC_tran_CTD PF16326.5 CCF74302.1 - 7.3 6.9 10.2 1.1 9.5 0.1 3.6 4 1 1 5 5 5 0 ABC transporter C-terminal domain Ribosomal_L22 PF00237.19 CCF74303.1 - 1.6e-11 44.3 2.3 1.3e-10 41.4 1.7 2.3 2 1 0 2 2 2 1 Ribosomal protein L22p/L17e VWA_CoxE PF05762.14 CCF74303.1 - 0.0098 15.3 0.1 0.013 14.9 0.1 1.3 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein Ribosomal_L27 PF01016.19 CCF74304.1 - 7.6e-09 35.5 0.2 1.9e-08 34.2 0.2 1.6 1 1 0 1 1 1 1 Ribosomal L27 protein SF3A2 PF16835.5 CCF74305.1 - 1.9e-28 98.7 0.0 3.9e-28 97.7 0.0 1.5 1 0 0 1 1 1 1 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) zf-met PF12874.7 CCF74305.1 - 2.1e-06 27.9 0.9 4.2e-06 27.0 0.9 1.5 1 0 0 1 1 1 1 Zinc-finger of C2H2 type WD40 PF00400.32 CCF74306.1 - 2.5e-14 53.4 9.8 0.0039 18.0 0.1 5.9 6 0 0 6 6 6 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF74306.1 - 3.7e-05 23.9 0.1 0.15 12.3 0.0 3.1 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 CCF74306.1 - 0.036 12.7 0.0 3.2 6.3 0.0 2.5 2 1 1 3 3 3 0 Nucleoporin Nup120/160 Metallothio_11 PF02066.15 CCF74307.1 - 0.019 15.2 0.7 0.044 14.0 0.7 1.5 1 0 0 1 1 1 0 Metallothionein family 11 Abhydrolase_1 PF00561.20 CCF74308.1 - 4.3e-25 88.8 0.1 1.2e-14 54.6 0.0 2.5 3 0 0 3 3 3 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CCF74308.1 - 1.6e-19 70.1 0.0 1.6e-18 66.9 0.0 2.0 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 CCF74308.1 - 6.9e-09 36.6 0.0 1.4e-08 35.6 0.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 CCF74308.1 - 0.00048 18.9 0.0 0.0009 18.0 0.0 1.4 1 1 0 1 1 1 1 Ndr family Abhydrolase_2 PF02230.16 CCF74308.1 - 0.0006 19.7 0.0 0.13 12.1 0.0 2.4 2 0 0 2 2 2 2 Phospholipase/Carboxylesterase FSH1 PF03959.13 CCF74308.1 - 0.015 14.9 0.0 0.4 10.3 0.0 3.0 2 1 0 2 2 2 0 Serine hydrolase (FSH1) GhoS PF11080.8 CCF74308.1 - 0.025 14.6 0.1 0.072 13.1 0.0 1.7 2 0 0 2 2 2 0 Endoribonuclease GhoS Esterase PF00756.20 CCF74308.1 - 0.052 13.2 0.0 0.081 12.6 0.0 1.2 1 0 0 1 1 1 0 Putative esterase Abhydrolase_4 PF08386.10 CCF74308.1 - 0.071 13.2 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 TAP-like protein AMP-binding PF00501.28 CCF74309.1 - 6.9e-74 248.9 0.0 8.5e-74 248.6 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CCF74309.1 - 0.0029 18.5 0.0 0.0061 17.5 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DXP_synthase_N PF13292.6 CCF74311.1 - 1.4e-76 257.3 0.1 9e-68 228.4 0.0 2.5 1 1 0 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 CCF74311.1 - 5.7e-38 130.4 0.0 9.7e-38 129.6 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 CCF74311.1 - 6e-16 58.5 0.0 2.3e-15 56.6 0.0 1.9 2 0 0 2 2 2 1 Transketolase, C-terminal domain Transketolase_N PF00456.21 CCF74311.1 - 1.3e-07 30.9 0.1 2e-07 30.3 0.1 1.2 1 0 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain TPP_enzyme_C PF02775.21 CCF74311.1 - 0.013 15.3 0.0 0.029 14.1 0.0 1.5 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 CCF74311.1 - 0.024 13.6 0.1 0.037 13.0 0.1 1.2 1 0 0 1 1 1 0 Dehydrogenase E1 component zf-C2HC5 PF06221.13 CCF74312.1 - 1e-08 35.0 7.3 1.7e-08 34.3 7.3 1.3 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type tRNA-synt_1b PF00579.25 CCF74313.1 - 8.9e-23 81.0 0.0 3.9e-15 55.9 0.0 2.1 1 1 1 2 2 2 2 tRNA synthetases class I (W and Y) Trigger_N PF05697.13 CCF74313.1 - 0.005 17.2 0.3 0.024 15.0 0.1 2.0 2 0 0 2 2 2 1 Bacterial trigger factor protein (TF) AF0941-like PF14591.6 CCF74313.1 - 4.1 8.0 5.6 1.1 9.8 0.2 2.5 3 0 0 3 3 3 0 AF0941-like Nudc_N PF14050.6 CCF74314.1 - 3.5e-12 46.1 0.1 7.9e-12 45.0 0.1 1.5 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. CS PF04969.16 CCF74314.1 - 2.5e-10 41.2 0.9 6.7e-10 39.8 0.9 1.8 1 0 0 1 1 1 1 CS domain PWWP PF00855.17 CCF74314.1 - 0.049 14.0 0.1 0.11 12.9 0.1 1.7 1 0 0 1 1 1 0 PWWP domain Peptidase_M3 PF01432.20 CCF74315.1 - 6.6e-49 167.4 4.7 7.6e-47 160.6 4.7 2.2 1 1 0 1 1 1 1 Peptidase family M3 DUF643 PF04867.12 CCF74315.1 - 2.6 8.7 9.5 0.22 12.2 0.9 3.2 3 1 0 4 4 4 0 Protein of unknown function (DUF643) TnpV PF14198.6 CCF74315.1 - 3.7 7.6 6.6 3.1 7.8 1.9 3.1 3 1 1 4 4 4 0 Transposon-encoded protein TnpV DUF2682 PF10909.8 CCF74315.1 - 4.8 7.8 10.4 50 4.5 0.1 4.4 5 0 0 5 5 5 0 Protein of unknown function (DUF2682) Ank_2 PF12796.7 CCF74316.1 - 5.2e-46 155.2 6.0 7.5e-18 64.9 0.0 4.5 3 1 3 6 6 6 4 Ankyrin repeats (3 copies) Ank_4 PF13637.6 CCF74316.1 - 8.3e-34 115.5 8.5 5.1e-09 36.5 0.0 6.0 2 1 4 7 7 7 6 Ankyrin repeats (many copies) Ank_3 PF13606.6 CCF74316.1 - 4.1e-28 94.3 2.2 3.4e-06 27.0 0.0 7.0 7 0 0 7 7 7 6 Ankyrin repeat Ank PF00023.30 CCF74316.1 - 7.7e-26 89.4 4.9 1.8e-07 31.3 0.0 6.5 6 0 0 6 6 6 6 Ankyrin repeat Ank_5 PF13857.6 CCF74316.1 - 1e-18 67.1 2.8 6.5e-08 32.7 0.1 5.6 1 1 5 6 6 6 5 Ankyrin repeats (many copies) Phage_T7_Capsid PF05396.11 CCF74316.1 - 0.065 13.6 0.0 1.1 9.6 0.0 2.5 2 0 0 2 2 2 0 Phage T7 capsid assembly protein Shigella_OspC PF06128.11 CCF74316.1 - 0.097 12.4 2.5 0.81 9.4 0.1 3.2 2 2 2 4 4 4 0 Shigella flexneri OspC protein EF-hand_6 PF13405.6 CCF74317.1 - 0.002 17.9 0.1 0.012 15.5 0.0 2.2 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 CCF74317.1 - 0.0025 17.2 0.0 0.0085 15.6 0.0 2.0 2 0 0 2 2 2 1 EF hand Bud13 PF09736.9 CCF74318.1 - 1.5e-42 145.4 4.5 3.3e-42 144.3 4.5 1.5 1 0 0 1 1 1 1 Pre-mRNA-splicing factor of RES complex PLU-1 PF08429.11 CCF74319.1 - 9.3e-14 51.3 7.1 6.1e-13 48.7 4.1 2.7 1 1 1 2 2 2 2 PLU-1-like protein LXG PF04740.12 CCF74319.1 - 0.026 14.2 0.2 0.11 12.2 0.2 2.0 1 0 0 1 1 1 0 LXG domain of WXG superfamily SF3a60_bindingd PF12108.8 CCF74319.1 - 0.048 13.5 0.0 0.18 11.7 0.0 2.0 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain DUF1465 PF07323.12 CCF74321.1 - 0.007 16.2 0.2 0.0091 15.8 0.2 1.5 1 1 0 1 1 1 1 Protein of unknown function (DUF1465) MIS13 PF08202.11 CCF74321.1 - 0.015 14.6 0.4 0.02 14.2 0.4 1.2 1 0 0 1 1 1 0 Mis12-Mtw1 protein family FliT PF05400.13 CCF74321.1 - 0.034 15.0 0.5 0.047 14.5 0.5 1.2 1 0 0 1 1 1 0 Flagellar protein FliT DpnI_C PF17726.1 CCF74321.1 - 0.04 14.0 2.3 0.059 13.5 2.3 1.4 1 1 0 1 1 1 0 Dam-replacing HTH domain Arc_C PF18162.1 CCF74321.1 - 0.047 13.5 0.3 0.14 12.1 0.0 1.9 2 1 0 2 2 2 0 Arc C-lobe GIT_CC PF16559.5 CCF74321.1 - 0.19 11.6 3.1 5.5 6.9 0.6 2.2 2 0 0 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor EAP30 PF04157.16 CCF74322.1 - 0.00059 19.2 0.0 0.00085 18.7 0.0 1.3 1 0 0 1 1 1 1 EAP30/Vps36 family RRM_1 PF00076.22 CCF74324.1 - 3.1e-14 52.6 0.0 4.5e-14 52.0 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF74324.1 - 0.026 14.4 0.0 0.056 13.3 0.0 1.5 1 1 0 1 1 1 0 Occluded RNA-recognition motif ADK PF00406.22 CCF74325.1 - 3.7e-27 95.3 0.0 4.6e-27 95.0 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 CCF74325.1 - 1.8e-10 41.4 0.0 2.9e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CCF74325.1 - 8.7e-07 29.5 0.0 1.3e-06 29.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CCF74325.1 - 7.3e-05 22.9 0.0 0.00012 22.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 CCF74325.1 - 0.12 12.8 0.1 0.24 11.8 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Fer4_10 PF13237.6 CCF74325.1 - 0.13 12.4 6.5 0.23 11.6 6.5 1.3 1 0 0 1 1 1 0 4Fe-4S dicluster domain RuvB_N PF05496.12 CCF74325.1 - 0.17 11.6 0.1 0.27 11.0 0.1 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ADK_lid PF05191.14 CCF74325.1 - 0.21 11.6 5.7 0.46 10.5 5.7 1.6 1 0 0 1 1 1 0 Adenylate kinase, active site lid Fer4_21 PF14697.6 CCF74325.1 - 0.26 11.4 4.8 0.48 10.6 4.8 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 CCF74325.1 - 1.6 9.4 9.6 0.12 12.9 2.8 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain Ribosomal_L29 PF00831.23 CCF74326.1 - 1.5e-16 60.1 1.7 1.5e-16 60.1 1.7 2.2 2 1 0 2 2 2 1 Ribosomal L29 protein KI67R PF08065.12 CCF74326.1 - 0.017 15.7 3.6 0.017 15.7 3.6 1.8 1 1 0 2 2 2 0 KI67R (NUC007) repeat Peptidase_M55 PF04951.13 CCF74326.1 - 0.095 12.1 1.7 0.11 11.8 1.7 1.0 1 0 0 1 1 1 0 D-aminopeptidase PGK PF00162.19 CCF74328.1 - 5.2e-135 450.2 0.0 5.9e-135 450.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase Gln-synt_C PF00120.24 CCF74329.1 - 7.2e-108 360.6 0.0 8.7e-108 360.4 0.0 1.0 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 CCF74329.1 - 1.3e-19 69.7 0.4 5e-19 67.8 0.7 1.9 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain Gln-synt_C PF00120.24 CCF74330.1 - 9e-107 357.0 0.0 1.1e-106 356.8 0.0 1.1 1 0 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 CCF74330.1 - 1.4e-19 69.6 0.4 5.1e-19 67.8 0.7 1.9 2 0 0 2 2 2 1 Glutamine synthetase, beta-Grasp domain Pribosyltran_N PF13793.6 CCF74331.1 - 1.6e-37 128.0 0.2 1.7e-36 124.7 0.1 2.1 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 CCF74331.1 - 1.2e-25 90.6 9.9 1e-24 87.6 4.0 2.9 2 1 1 3 3 3 2 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 CCF74331.1 - 4.1e-16 58.9 0.2 8.7e-16 57.8 0.2 1.5 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 CCF74331.1 - 0.00019 20.9 0.2 0.00031 20.2 0.2 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Avian_gp85 PF03708.14 CCF74331.1 - 0.079 12.1 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Avian retrovirus envelope protein, gp85 LSM PF01423.22 CCF74332.1 - 2.1e-12 46.5 0.4 2.8e-12 46.1 0.4 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 CCF74332.1 - 0.00027 21.0 0.0 0.0003 20.9 0.0 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain DUF4962 PF16332.5 CCF74333.1 - 0.051 12.1 1.1 0.074 11.5 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4962) SRPRB PF09439.10 CCF74334.1 - 7.4e-23 80.9 0.2 9.7e-23 80.5 0.2 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 CCF74334.1 - 1.9e-14 53.5 0.0 2.6e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 CCF74334.1 - 3.3e-11 43.1 0.2 2.4e-06 27.2 0.0 2.1 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Ras PF00071.22 CCF74334.1 - 2.8e-07 30.3 0.1 4.1e-07 29.7 0.1 1.3 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF74334.1 - 5.1e-06 26.7 0.0 9.7e-06 25.8 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 CCF74334.1 - 2.1e-05 24.6 0.1 3.5e-05 23.8 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF74334.1 - 5.9e-05 22.5 0.1 9.2e-05 21.9 0.1 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region PduV-EutP PF10662.9 CCF74334.1 - 0.0018 18.0 0.1 0.0096 15.7 0.1 2.2 1 1 1 2 2 2 1 Ethanolamine utilisation - propanediol utilisation G-alpha PF00503.20 CCF74334.1 - 0.1 11.8 2.8 0.35 10.0 0.1 2.5 1 1 1 2 2 2 0 G-protein alpha subunit DUF1410 PF07198.11 CCF74335.1 - 0.056 14.0 0.2 3.7 8.1 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1410) Pro_isomerase PF00160.21 CCF74336.1 - 1.3e-36 126.2 0.4 2.1e-36 125.6 0.4 1.3 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKBP_C PF00254.28 CCF74336.1 - 7.3e-32 109.6 0.0 2.1e-31 108.1 0.0 1.8 2 0 0 2 2 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase TPR_2 PF07719.17 CCF74336.1 - 2.1e-15 55.5 0.1 0.00012 21.9 0.1 3.4 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 CCF74336.1 - 2.4e-15 55.6 1.4 2.1e-06 27.3 0.4 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 CCF74336.1 - 1.3e-13 50.4 1.3 3.2e-07 29.9 0.4 3.4 2 1 1 3 3 3 3 TPR repeat TPR_8 PF13181.6 CCF74336.1 - 4.5e-09 35.8 0.4 0.00023 21.1 0.5 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 CCF74336.1 - 7.5e-08 32.2 0.3 0.4 11.2 0.1 3.5 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 CCF74336.1 - 1.2e-07 31.9 0.0 0.0091 16.3 0.1 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 CCF74336.1 - 6.4e-06 26.6 0.2 0.0025 18.3 0.1 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_9 PF13371.6 CCF74336.1 - 5.3e-05 23.3 0.0 9.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_6 PF13174.6 CCF74336.1 - 0.00017 22.0 0.1 0.92 10.3 0.0 3.7 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 CCF74336.1 - 0.00022 21.8 0.0 0.044 14.5 0.0 3.1 2 1 2 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 CCF74336.1 - 0.00032 20.5 0.1 0.011 15.7 0.0 2.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_14 PF13428.6 CCF74336.1 - 0.0024 18.6 0.0 0.35 11.8 0.0 2.7 2 1 1 3 3 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF74336.1 - 0.0043 17.2 2.7 0.0084 16.3 1.5 2.2 1 1 2 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 FKBP_N_2 PF18023.1 CCF74336.1 - 0.038 14.1 0.0 0.23 11.6 0.0 2.3 2 1 0 2 2 2 0 BDBT FKBP like N-terminal ANAPC5 PF12862.7 CCF74336.1 - 0.05 13.7 0.3 0.59 10.2 0.1 2.6 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 PknG_TPR PF16918.5 CCF74336.1 - 0.14 10.8 0.0 0.2 10.4 0.0 1.1 1 0 0 1 1 1 0 Protein kinase G tetratricopeptide repeat MIT PF04212.18 CCF74336.1 - 0.16 12.0 0.2 42 4.3 0.0 3.1 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain Fis1_TPR_C PF14853.6 CCF74336.1 - 0.2 11.8 0.6 2.3 8.3 0.2 2.2 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat TRAPPC-Trs85 PF12739.7 CCF74338.1 - 7.6e-08 31.7 0.1 1.3e-07 31.0 0.1 1.4 1 0 0 1 1 1 1 ER-Golgi trafficking TRAPP I complex 85 kDa subunit TRAPPC9-Trs120 PF08626.11 CCF74338.1 - 7.9e-06 23.5 0.1 1.1e-05 23.0 0.1 1.1 1 0 0 1 1 1 1 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit Radical_SAM PF04055.21 CCF74339.1 - 2.5e-11 44.2 0.0 5.4e-11 43.2 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily RRM_1 PF00076.22 CCF74340.1 - 8.5e-22 76.8 0.0 1.3e-21 76.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 CCF74340.1 - 0.0099 15.9 0.0 0.016 15.2 0.0 1.3 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif DUF2250 PF10007.9 CCF74340.1 - 0.13 12.4 0.3 0.21 11.7 0.3 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) Pns11_12 PF17464.2 CCF74340.1 - 0.51 10.0 10.1 0.8 9.4 10.1 1.3 1 0 0 1 1 1 0 Non-structural protein 11 and 12 ABC_tran PF00005.27 CCF74342.1 - 2.8e-36 125.1 5.7 1.8e-17 64.1 0.0 3.8 4 0 0 4 4 3 3 ABC transporter AAA_21 PF13304.6 CCF74342.1 - 2.5e-19 70.2 17.7 2.3e-07 30.9 1.2 4.9 5 0 0 5 5 5 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 CCF74342.1 - 3.7e-09 36.3 16.0 2.1e-06 27.4 1.9 4.2 4 1 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CCF74342.1 - 1.4e-08 34.3 0.8 0.0015 18.3 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 CCF74342.1 - 3e-08 33.8 0.2 0.0031 17.6 0.0 3.0 2 0 0 2 2 2 2 50S ribosome-binding GTPase NTPase_1 PF03266.15 CCF74342.1 - 1e-06 28.8 1.6 0.0082 16.1 0.2 3.5 3 0 0 3 3 3 2 NTPase AAA_16 PF13191.6 CCF74342.1 - 1.8e-06 28.4 0.0 0.008 16.6 0.0 3.1 3 0 0 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 CCF74342.1 - 6.9e-06 26.1 0.5 0.05 13.5 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_23 PF13476.6 CCF74342.1 - 2.6e-05 24.8 16.4 0.018 15.6 0.4 3.4 2 2 0 2 2 2 2 AAA domain AAA_24 PF13479.6 CCF74342.1 - 0.00011 22.1 0.1 0.087 12.5 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CCF74342.1 - 0.00011 22.5 1.1 0.26 11.6 0.0 3.8 3 1 1 4 4 3 1 AAA domain DUF815 PF05673.13 CCF74342.1 - 0.00053 19.2 0.0 0.68 9.0 0.0 2.4 2 0 0 2 2 2 2 Protein of unknown function (DUF815) MeaB PF03308.16 CCF74342.1 - 0.00061 18.9 0.0 0.076 12.0 0.0 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 CCF74342.1 - 0.00067 19.6 0.1 0.47 10.4 0.1 2.7 2 0 0 2 2 2 1 NACHT domain NB-ARC PF00931.22 CCF74342.1 - 0.00097 18.4 1.7 0.16 11.1 0.1 2.6 3 0 0 3 3 3 1 NB-ARC domain ATP-synt_ab PF00006.25 CCF74342.1 - 0.0011 18.6 0.0 0.81 9.3 0.0 2.3 2 0 0 2 2 2 2 ATP synthase alpha/beta family, nucleotide-binding domain RNA_helicase PF00910.22 CCF74342.1 - 0.0016 18.8 0.2 1.2 9.6 0.0 3.2 3 0 0 3 3 2 1 RNA helicase MCM PF00493.23 CCF74342.1 - 0.0033 16.6 0.2 0.44 9.6 0.1 3.2 3 0 0 3 3 3 1 MCM P-loop domain DUF87 PF01935.17 CCF74342.1 - 0.0033 17.5 3.4 2.3 8.3 0.2 3.2 3 0 0 3 3 3 2 Helicase HerA, central domain AAA_7 PF12775.7 CCF74342.1 - 0.0039 16.7 0.1 0.3 10.6 0.0 2.4 2 0 0 2 2 2 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 CCF74342.1 - 0.0042 16.8 0.2 0.47 10.2 0.0 3.2 3 0 0 3 3 3 1 IstB-like ATP binding protein KAP_NTPase PF07693.14 CCF74342.1 - 0.0053 16.0 0.1 3.2 6.9 0.0 2.7 3 0 0 3 3 3 1 KAP family P-loop domain AAA_33 PF13671.6 CCF74342.1 - 0.0069 16.5 0.0 0.82 9.8 0.0 2.5 2 0 0 2 2 2 1 AAA domain Roc PF08477.13 CCF74342.1 - 0.008 16.4 0.1 6.3 7.1 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Sigma54_activat PF00158.26 CCF74342.1 - 0.0088 15.8 0.0 5.1 6.8 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain MobB PF03205.14 CCF74342.1 - 0.0094 15.9 0.2 1.1 9.1 0.0 2.6 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B TsaE PF02367.17 CCF74342.1 - 0.016 15.2 0.0 5.3 7.1 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PRK PF00485.18 CCF74342.1 - 0.02 14.6 0.2 0.52 10.0 0.0 2.4 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family AAA_18 PF13238.6 CCF74342.1 - 0.023 15.3 7.2 2.1 8.9 1.0 4.2 3 1 0 3 3 3 0 AAA domain Gtr1_RagA PF04670.12 CCF74342.1 - 0.023 14.1 0.1 2.5 7.4 0.0 2.7 2 0 0 2 2 2 0 Gtr1/RagA G protein conserved region AAA PF00004.29 CCF74342.1 - 0.065 13.7 0.4 7 7.1 0.0 3.1 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CCF74342.1 - 0.08 12.9 0.0 18 5.3 0.0 2.9 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 CCF74342.1 - 0.08 12.3 0.2 2.4 7.4 0.1 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family TrkA_C PF02080.21 CCF74342.1 - 0.09 12.6 0.1 0.95 9.3 0.0 2.4 2 0 0 2 2 2 0 TrkA-C domain GTP_EFTU PF00009.27 CCF74342.1 - 0.098 12.2 0.2 14 5.1 0.1 2.5 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_14 PF13173.6 CCF74342.1 - 0.098 12.7 3.4 3.6 7.6 0.0 4.0 4 0 0 4 4 4 0 AAA domain AAA_30 PF13604.6 CCF74342.1 - 0.11 12.2 0.0 20 4.8 0.0 2.3 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 CCF74342.1 - 0.16 12.2 0.1 5.1 7.4 0.0 2.9 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_28 PF13521.6 CCF74342.1 - 1.2 9.4 5.0 18 5.6 0.1 3.0 4 0 0 4 4 2 0 AAA domain ThiF PF00899.21 CCF74343.1 - 1.6e-30 106.3 0.0 3.3e-30 105.2 0.0 1.4 1 0 0 1 1 1 1 ThiF family ATG7_N PF16420.5 CCF74343.1 - 2.6e-07 30.6 2.9 1.5e-06 28.1 2.9 1.9 1 1 0 1 1 1 1 Ubiquitin-like modifier-activating enzyme ATG7 N-terminus ApbA PF02558.16 CCF74343.1 - 0.029 14.0 0.1 0.049 13.3 0.1 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DAO PF01266.24 CCF74343.1 - 0.11 12.0 0.0 0.16 11.5 0.0 1.2 1 0 0 1 1 1 0 FAD dependent oxidoreductase LSM PF01423.22 CCF74344.1 - 2.7e-11 43.0 0.0 4.7e-11 42.2 0.0 1.4 1 0 0 1 1 1 1 LSM domain BET PF17035.5 CCF74344.1 - 0.025 14.7 0.1 0.077 13.2 0.1 1.9 1 1 0 1 1 1 0 Bromodomain extra-terminal - transcription regulation SM-ATX PF14438.6 CCF74344.1 - 0.065 13.4 0.0 0.14 12.3 0.0 1.5 1 0 0 1 1 1 0 Ataxin 2 SM domain Choline_kinase PF01633.20 CCF74345.1 - 3.1e-47 160.9 0.1 5e-47 160.2 0.1 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 CCF74345.1 - 7.1e-13 49.0 0.0 2e-12 47.5 0.0 1.8 2 1 0 2 2 2 1 Phosphotransferase enzyme family EcKinase PF02958.20 CCF74345.1 - 0.019 14.3 0.0 0.17 11.1 0.0 2.0 2 0 0 2 2 2 0 Ecdysteroid kinase Pkinase PF00069.25 CCF74345.1 - 0.078 12.3 0.0 0.48 9.7 0.0 2.0 2 0 0 2 2 2 0 Protein kinase domain DUF1679 PF07914.11 CCF74345.1 - 0.093 11.6 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1679) Pkinase PF00069.25 CCF74346.1 - 2.5e-64 217.2 0.0 3.3e-64 216.8 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74346.1 - 6.1e-42 143.7 0.0 8.2e-42 143.3 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 CCF74346.1 - 0.00078 18.3 0.0 0.0012 17.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 CCF74346.1 - 0.0016 17.5 0.1 0.0024 16.9 0.1 1.4 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 CCF74346.1 - 0.0039 16.8 0.1 0.0092 15.6 0.1 1.6 2 0 0 2 2 2 1 RIO1 family Kdo PF06293.14 CCF74346.1 - 0.012 15.0 0.1 0.02 14.2 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 CCF74346.1 - 0.039 13.3 0.0 0.08 12.2 0.0 1.5 1 1 0 1 1 1 0 Kinase-like APH PF01636.23 CCF74346.1 - 0.056 13.4 0.2 0.16 11.9 0.2 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family RRM_1 PF00076.22 CCF74347.1 - 4.8e-79 260.2 0.4 3.3e-21 74.9 0.0 4.3 4 0 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PABP PF00658.18 CCF74347.1 - 4.7e-26 90.7 2.5 7.1e-26 90.2 1.3 1.9 2 0 0 2 2 2 1 Poly-adenylate binding protein, unique domain RRM_occluded PF16842.5 CCF74347.1 - 5.9e-05 22.8 0.0 0.23 11.4 0.0 4.3 4 0 0 4 4 4 1 Occluded RNA-recognition motif RNA_bind PF08675.11 CCF74347.1 - 0.00016 21.6 0.1 0.022 14.8 0.0 3.4 3 0 0 3 3 3 1 RNA binding domain Limkain-b1 PF11608.8 CCF74347.1 - 0.066 13.3 0.0 20 5.4 0.0 3.1 3 0 0 3 3 3 0 Limkain b1 RRM_7 PF16367.5 CCF74347.1 - 0.11 12.7 0.0 37 4.5 0.0 3.6 4 1 0 4 4 4 0 RNA recognition motif RRS1 PF04939.12 CCF74348.1 - 3.2e-44 150.7 2.3 5.8e-44 149.8 2.3 1.4 1 0 0 1 1 1 1 Ribosome biogenesis regulatory protein (RRS1) EzrA PF06160.12 CCF74348.1 - 0.0078 14.4 2.0 0.013 13.8 2.0 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF573 PF04504.14 CCF74348.1 - 0.18 12.5 0.4 0.18 12.5 0.4 2.1 2 1 0 2 2 2 0 Protein of unknown function, DUF573 Nore1-SARAH PF16517.5 CCF74348.1 - 1.9 8.5 4.8 2.3 8.2 1.4 2.3 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain GrpE PF01025.19 CCF74349.1 - 1.3e-47 161.6 2.7 1.7e-47 161.2 2.7 1.1 1 0 0 1 1 1 1 GrpE NBP1 PF08537.10 CCF74349.1 - 0.001 18.6 0.5 0.0014 18.1 0.5 1.3 1 0 0 1 1 1 1 Fungal Nap binding protein NBP1 Uds1 PF15456.6 CCF74349.1 - 0.0021 18.2 0.4 0.0043 17.2 0.4 1.5 1 0 0 1 1 1 1 Up-regulated During Septation TSC22 PF01166.18 CCF74349.1 - 0.0049 17.1 1.2 0.015 15.6 1.2 1.8 1 0 0 1 1 1 1 TSC-22/dip/bun family TPR_MLP1_2 PF07926.12 CCF74349.1 - 0.011 15.8 5.1 0.022 14.8 5.1 1.4 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein Pox_A_type_inc PF04508.12 CCF74349.1 - 0.012 15.4 1.5 0.084 12.8 0.1 2.8 2 0 0 2 2 2 0 Viral A-type inclusion protein repeat ALIX_LYPXL_bnd PF13949.6 CCF74349.1 - 0.018 14.3 1.9 0.025 13.9 1.6 1.4 1 1 0 1 1 1 0 ALIX V-shaped domain binding to HIV ABC_tran_CTD PF16326.5 CCF74349.1 - 0.022 15.0 2.2 0.059 13.6 2.2 1.9 1 0 0 1 1 1 0 ABC transporter C-terminal domain She9_MDM33 PF05546.11 CCF74349.1 - 0.027 14.3 0.6 0.071 12.9 0.4 1.9 2 0 0 2 2 2 0 She9 / Mdm33 family CENP-Q PF13094.6 CCF74349.1 - 0.033 14.4 1.2 0.046 13.9 1.2 1.3 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit DUF3502 PF12010.8 CCF74349.1 - 0.049 14.3 0.6 0.64 10.7 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3502) Sugarporin_N PF11471.8 CCF74349.1 - 0.052 13.5 0.4 0.14 12.2 0.4 1.7 1 0 0 1 1 1 0 Maltoporin periplasmic N-terminal extension Herpes_UL6 PF01763.16 CCF74349.1 - 0.062 11.8 1.1 0.091 11.3 1.1 1.1 1 0 0 1 1 1 0 Herpesvirus UL6 like DUF3461 PF11944.8 CCF74349.1 - 0.07 13.3 3.2 0.061 13.4 1.5 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3461) Ig_C17orf99 PF17736.1 CCF74349.1 - 0.096 12.7 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 C17orf99 Ig domain DUF1664 PF07889.12 CCF74349.1 - 0.11 12.5 1.7 0.35 10.9 1.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) CLZ PF16526.5 CCF74349.1 - 0.12 12.8 2.5 0.55 10.6 0.7 2.3 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels DUF4094 PF13334.6 CCF74349.1 - 0.14 12.5 0.5 0.65 10.5 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4094) TMF_DNA_bd PF12329.8 CCF74349.1 - 0.16 12.0 6.4 0.072 13.1 3.1 2.1 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Swi5 PF07061.11 CCF74349.1 - 0.19 11.8 2.2 0.41 10.8 1.4 2.0 2 0 0 2 2 1 0 Swi5 PHM7_cyt PF14703.6 CCF74349.1 - 0.22 11.8 1.9 1.1 9.5 0.3 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter DUF4140 PF13600.6 CCF74349.1 - 0.24 11.8 2.8 0.25 11.8 1.3 1.8 2 1 0 2 2 1 0 N-terminal domain of unknown function (DUF4140) Aida_N PF08910.10 CCF74349.1 - 0.27 11.7 1.4 0.77 10.2 1.0 1.9 1 1 1 2 2 2 0 Aida N-terminus Baculo_PEP_C PF04513.12 CCF74349.1 - 0.37 10.8 6.8 1.8 8.6 6.8 2.0 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus XhlA PF10779.9 CCF74349.1 - 0.77 10.0 3.3 0.97 9.7 1.2 2.2 2 1 0 2 2 2 0 Haemolysin XhlA Ocnus PF05005.15 CCF74350.1 - 3.3e-29 101.2 0.0 4e-29 100.9 0.0 1.0 1 0 0 1 1 1 1 Janus/Ocnus family (Ocnus) LSM PF01423.22 CCF74352.1 - 1.9e-16 59.5 0.7 2.9e-16 58.9 0.7 1.3 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 CCF74352.1 - 0.0072 16.4 0.2 0.0092 16.1 0.2 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain BPL_C PF02237.17 CCF74352.1 - 0.04 13.8 0.2 0.08 12.9 0.2 1.5 1 0 0 1 1 1 0 Biotin protein ligase C terminal domain Gemin7 PF11095.8 CCF74352.1 - 0.075 12.9 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Gem-associated protein 7 (Gemin7) Tim44 PF04280.15 CCF74353.1 - 1.2e-27 96.8 0.3 3.6e-27 95.3 0.0 1.9 2 1 1 3 3 3 1 Tim44-like domain Pec_lyase_N PF04431.13 CCF74353.1 - 0.1 12.8 0.3 0.37 11.1 0.3 1.9 1 0 0 1 1 1 0 Pectate lyase, N terminus DivIVA PF05103.13 CCF74353.1 - 0.12 12.5 5.2 0.29 11.2 5.2 1.7 1 1 0 1 1 1 0 DivIVA protein hDGE_amylase PF14701.6 CCF74353.1 - 0.28 10.2 6.8 0.41 9.7 6.8 1.2 1 0 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain SNARE PF05739.19 CCF74353.1 - 0.3 11.1 2.6 2.9 7.9 0.5 3.0 3 0 0 3 3 3 0 SNARE domain DUF3510 PF12022.8 CCF74353.1 - 3.1 8.2 8.3 3.8 7.9 5.3 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF3510) Tim17 PF02466.19 CCF74354.1 - 3.5e-26 91.7 3.9 6.3e-26 90.9 3.9 1.4 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family DUF1005 PF06219.12 CCF74354.1 - 0.042 12.9 0.1 0.056 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1005) Phage_holin_3_3 PF16083.5 CCF74354.1 - 0.38 10.9 4.2 13 6.0 0.2 2.7 2 1 0 2 2 2 0 LydA holin phage, holin superfamily III MMS19_N PF14500.6 CCF74355.1 - 6.4e-25 88.2 0.5 2.1e-24 86.5 0.5 1.9 1 0 0 1 1 1 1 Dos2-interacting transcription regulator of RNA-Pol-II MKT1_N PF12247.8 CCF74355.1 - 0.05 14.0 0.7 1.2 9.6 0.2 2.8 2 0 0 2 2 2 0 Temperature dependent protein affecting M2 dsRNA replication DUF778 PF05608.12 CCF74356.1 - 4.8e-13 49.9 1.8 2.4e-12 47.6 0.4 1.9 1 1 1 2 2 2 2 Protein of unknown function (DUF778) MOLO1 PF17175.4 CCF74357.1 - 2.1e-21 76.2 1.2 9.5e-21 74.1 0.1 2.6 2 0 0 2 2 2 1 Modulator of levamisole receptor-1 TPM_phosphatase PF04536.14 CCF74357.1 - 1.3e-05 25.4 0.2 7.5e-05 22.9 0.2 2.3 1 1 0 1 1 1 1 TPM domain PhyH PF05721.13 CCF74357.1 - 0.034 14.4 0.0 3.8 7.7 0.0 2.5 2 0 0 2 2 2 0 Phytanoyl-CoA dioxygenase (PhyH) Transketolase_C PF02780.20 CCF74358.1 - 1.1e-37 128.7 0.0 1.5e-37 128.2 0.0 1.2 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transket_pyr PF02779.24 CCF74358.1 - 3.2e-30 105.1 0.0 4.2e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain PFOR_II PF17147.4 CCF74358.1 - 0.004 17.4 0.0 0.0076 16.5 0.0 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II ISG65-75 PF11727.8 CCF74359.1 - 0.00064 19.0 8.7 0.00064 19.0 8.7 2.1 2 0 0 2 2 2 1 Invariant surface glycoprotein Spc29 PF17082.5 CCF74359.1 - 0.0059 16.5 1.1 0.0059 16.5 1.1 2.2 2 0 0 2 2 2 1 Spindle Pole Component 29 DUF3412 PF11892.8 CCF74359.1 - 0.0082 16.2 0.1 0.022 14.8 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3412) BCAS2 PF05700.11 CCF74359.1 - 0.043 13.5 0.5 0.043 13.5 0.5 2.1 2 1 0 2 2 2 0 Breast carcinoma amplified sequence 2 (BCAS2) UPF0242 PF06785.11 CCF74359.1 - 1.2 9.2 14.0 2.4 8.2 3.9 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Baculo_PEP_C PF04513.12 CCF74359.1 - 1.8 8.6 12.2 0.83 9.7 4.6 3.1 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus FAM76 PF16046.5 CCF74359.1 - 6.7 6.0 16.5 10 5.4 16.5 1.3 1 0 0 1 1 1 0 FAM76 protein Baculo_p24 PF05073.12 CCF74359.1 - 7.5 6.3 11.7 9.6 5.9 2.6 2.7 1 1 0 2 2 2 0 Baculovirus P24 capsid protein AhpC-TSA PF00578.21 CCF74360.1 - 0.024 14.6 2.5 0.12 12.3 0.7 2.6 2 0 0 2 2 2 0 AhpC/TSA family DUF3391 PF11871.8 CCF74360.1 - 0.065 13.8 2.2 9.4 6.8 0.1 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF3391) ISG65-75 PF11727.8 CCF74360.1 - 0.24 10.6 13.9 0.68 9.1 2.1 2.4 2 1 0 2 2 2 0 Invariant surface glycoprotein TMCO5 PF14992.6 CCF74360.1 - 0.69 9.4 17.6 1.8 8.1 15.6 2.1 1 1 1 2 2 2 0 TMCO5 family LMBR1 PF04791.16 CCF74360.1 - 0.8 8.5 5.1 1.3 7.9 5.1 1.4 1 0 0 1 1 1 0 LMBR1-like membrane protein E1-E2_ATPase PF00122.20 CCF74361.1 - 1.5e-21 76.7 0.1 4.3e-21 75.2 0.1 1.8 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 CCF74361.1 - 2.5e-09 37.7 0.0 0.00056 20.2 0.0 3.5 3 0 0 3 3 3 3 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 CCF74361.1 - 0.0025 17.5 0.0 0.007 16.0 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 CCF74361.1 - 0.0027 17.7 0.0 0.0055 16.8 0.0 1.5 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cofilin_ADF PF00241.20 CCF74362.1 - 5.2e-08 32.7 0.1 7.4e-08 32.2 0.1 1.2 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein Rib_hydrolayse PF02267.17 CCF74362.1 - 0.034 13.6 0.0 0.042 13.3 0.0 1.2 1 0 0 1 1 1 0 ADP-ribosyl cyclase Ribosomal_L31e PF01198.19 CCF74363.1 - 2.9e-38 130.0 5.2 4.3e-38 129.4 5.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L31e DEAD PF00270.29 CCF74364.1 - 1.2e-19 70.7 0.1 2.1e-19 70.0 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74364.1 - 5.4e-09 36.4 0.0 3.2e-08 33.9 0.0 2.3 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74364.1 - 6.3e-08 32.8 0.0 1.4e-07 31.7 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Prp18 PF02840.15 CCF74365.1 - 4.5e-44 150.0 0.1 4.5e-44 150.0 0.1 2.2 2 0 0 2 2 2 1 Prp18 domain HTH_26 PF13443.6 CCF74365.1 - 0.62 10.6 3.9 1.1 9.7 0.5 2.8 3 0 0 3 3 3 0 Cro/C1-type HTH DNA-binding domain Reticulon PF02453.17 CCF74366.1 - 3.9e-10 39.9 10.6 5.7e-10 39.4 10.6 1.3 1 0 0 1 1 1 1 Reticulon KH_1 PF00013.29 CCF74367.1 - 0.0024 17.7 0.2 0.0075 16.1 0.2 1.9 1 0 0 1 1 1 1 KH domain Cyto_heme_lyase PF01265.17 CCF74368.1 - 1e-31 110.6 2.8 1.9e-29 103.2 2.8 2.4 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase DUF4092 PF13322.6 CCF74368.1 - 0.08 12.8 0.1 0.12 12.3 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4092) zf-Tim10_DDP PF02953.15 CCF74369.1 - 7.3e-18 64.0 0.7 8.5e-18 63.8 0.7 1.0 1 0 0 1 1 1 1 Tim10/DDP family zinc finger eIF-5a PF01287.20 CCF74370.1 - 1.9e-23 82.3 0.1 2.7e-23 81.9 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 CCF74370.1 - 5.1e-05 23.2 0.1 8.3e-05 22.5 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain NACHT PF05729.12 CCF74371.1 - 0.00038 20.4 0.2 1.4 8.8 0.0 3.0 3 0 0 3 3 3 2 NACHT domain AAA PF00004.29 CCF74371.1 - 0.001 19.5 0.2 1.9 8.9 0.0 3.0 3 1 0 3 3 3 2 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF74371.1 - 0.0019 18.5 0.2 1.9 8.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain Elong_Iki1 PF10483.9 CCF74371.1 - 0.0023 17.5 0.4 0.0044 16.6 0.2 1.5 1 1 0 1 1 1 1 Elongator subunit Iki1 RsgA_GTPase PF03193.16 CCF74371.1 - 0.007 16.3 0.0 0.018 14.9 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_25 PF13481.6 CCF74371.1 - 0.029 14.0 0.0 0.077 12.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CCF74371.1 - 0.13 12.7 0.1 0.38 11.3 0.1 1.8 1 0 0 1 1 1 0 ABC transporter Rad17 PF03215.15 CCF74371.1 - 0.42 10.5 7.8 0.082 12.8 2.3 2.5 2 1 0 2 2 2 0 Rad17 P-loop domain CbiA PF01656.23 CCF74371.1 - 0.45 10.6 1.5 2.6 8.1 0.0 2.5 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain H-kinase_dim PF02895.14 CCF74372.1 - 0.036 14.4 1.9 0.21 12.0 1.5 2.4 2 1 1 3 3 3 0 Signal transducing histidine kinase, homodimeric domain DUF4472 PF14739.6 CCF74372.1 - 0.048 14.4 4.5 0.11 13.2 4.5 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4472) Exonuc_VII_L PF02601.15 CCF74372.1 - 0.074 12.6 1.1 0.097 12.2 1.1 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF3016 PF11454.8 CCF74372.1 - 0.097 12.4 0.4 0.25 11.1 0.2 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3016) Rep_fac-A_C PF08646.10 CCF74372.1 - 0.13 12.0 0.1 0.19 11.5 0.1 1.3 1 0 0 1 1 1 0 Replication factor-A C terminal domain SBP56 PF05694.11 CCF74372.1 - 0.14 10.9 0.0 0.18 10.6 0.0 1.2 1 0 0 1 1 1 0 56kDa selenium binding protein (SBP56) CK_II_beta PF01214.18 CCF74373.1 - 9e-68 227.7 1.0 1.1e-67 227.4 1.0 1.0 1 0 0 1 1 1 1 Casein kinase II regulatory subunit ADK_lid PF05191.14 CCF74373.1 - 0.0026 17.7 0.3 0.0064 16.5 0.3 1.7 1 0 0 1 1 1 1 Adenylate kinase, active site lid IBR PF01485.21 CCF74373.1 - 0.014 15.6 1.2 0.047 13.9 1.2 1.8 1 1 0 1 1 1 0 IBR domain, a half RING-finger domain RIO1 PF01163.22 CCF74374.1 - 2.7e-60 203.2 1.3 6e-60 202.1 1.3 1.6 1 0 0 1 1 1 1 RIO1 family Pkinase_fungal PF17667.1 CCF74374.1 - 0.0023 16.7 0.5 0.0045 15.8 0.5 1.5 1 1 0 1 1 1 1 Fungal protein kinase APH PF01636.23 CCF74374.1 - 0.0031 17.4 0.0 0.03 14.2 0.0 2.1 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 CCF74374.1 - 0.013 14.8 0.3 0.028 13.7 0.3 1.5 1 0 0 1 1 1 0 Protein tyrosine kinase Ras PF00071.22 CCF74376.1 - 1.7e-53 180.6 0.0 2.4e-53 180.0 0.0 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF74376.1 - 2.5e-28 98.7 0.0 4.7e-28 97.8 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF74376.1 - 7.5e-10 38.5 0.0 1.3e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family Rep_fac-A_C PF08646.10 CCF74376.1 - 0.00015 21.5 0.6 0.0003 20.6 0.6 1.4 1 0 0 1 1 1 1 Replication factor-A C terminal domain MMR_HSR1 PF01926.23 CCF74376.1 - 0.029 14.4 0.0 0.088 12.9 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase GTP_EFTU PF00009.27 CCF74376.1 - 0.1 12.1 0.0 0.18 11.3 0.0 1.4 1 0 0 1 1 1 0 Elongation factor Tu GTP binding domain DNA_pol_E_B PF04042.16 CCF74376.1 - 0.19 11.0 0.1 0.66 9.3 0.0 1.8 2 0 0 2 2 2 0 DNA polymerase alpha/epsilon subunit B GIT_CC PF16559.5 CCF74377.1 - 0.055 13.3 0.3 0.093 12.6 0.1 1.5 1 1 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor SSXRD PF09514.10 CCF74379.1 - 0.036 13.7 0.7 10 5.8 0.1 2.4 2 0 0 2 2 2 0 SSXRD motif U79_P34 PF03064.16 CCF74379.1 - 0.062 12.6 0.3 11 5.2 0.0 2.4 2 0 0 2 2 2 0 HSV U79 / HCMV P34 CdiI_2 PF18593.1 CCF74379.1 - 0.11 13.2 1.5 26 5.5 0.0 3.2 3 0 0 3 3 3 0 CdiI immunity protein MetallophosN PF16371.5 CCF74379.1 - 0.38 11.1 2.9 27 5.1 0.1 3.0 3 0 0 3 3 3 0 N terminal of Calcineurin-like phosphoesterase VPS28 PF03997.12 CCF74384.1 - 1.1e-33 116.5 4.0 5e-22 78.5 0.4 2.0 1 1 1 2 2 2 2 VPS28 protein RNase_H PF00075.24 CCF74384.1 - 0.011 16.0 0.5 2 8.6 0.0 2.1 2 0 0 2 2 2 0 RNase H Asp PF00026.23 CCF74385.1 - 9.1e-46 156.7 0.0 5.7e-45 154.1 0.0 1.8 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 CCF74385.1 - 5.1e-07 30.1 0.2 9.2e-06 26.0 0.0 2.2 1 1 1 2 2 2 1 Xylanase inhibitor N-terminal His_Phos_2 PF00328.22 CCF74386.1 - 3.1e-52 178.2 0.0 3.4e-51 174.8 0.0 2.3 1 1 0 1 1 1 1 Histidine phosphatase superfamily (branch 2) PPIP5K2_N PF18086.1 CCF74386.1 - 9.6e-33 112.2 0.1 2.5e-32 110.9 0.1 1.7 1 0 0 1 1 1 1 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain RimK PF08443.11 CCF74386.1 - 0.0019 17.8 0.0 0.0049 16.5 0.0 1.6 1 0 0 1 1 1 1 RimK-like ATP-grasp domain HEPN_Apea PF18739.1 CCF74386.1 - 0.062 13.7 0.0 0.15 12.5 0.0 1.6 1 0 0 1 1 1 0 Apea-like HEPN PTPA PF03095.15 CCF74387.1 - 1.1e-80 271.3 0.0 1.4e-80 270.9 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein zf-RING_2 PF13639.6 CCF74389.1 - 1.2e-11 44.7 5.1 1.7e-11 44.3 4.3 1.7 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 CCF74389.1 - 5.7e-10 38.9 3.7 1.1e-09 38.0 3.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 CCF74389.1 - 3.6e-08 33.0 4.2 5.9e-08 32.3 2.7 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 CCF74389.1 - 2.6e-07 30.4 3.5 5.7e-07 29.3 3.5 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 CCF74389.1 - 3.4e-07 30.4 7.6 1.3e-06 28.6 7.6 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 CCF74389.1 - 2e-05 24.5 2.7 3.4e-05 23.7 2.7 1.4 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 CCF74389.1 - 0.00096 19.0 6.2 0.002 18.0 6.2 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 CCF74389.1 - 0.0051 16.8 3.0 0.013 15.5 3.0 1.8 1 1 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 CCF74389.1 - 0.0053 16.8 1.3 0.012 15.7 1.3 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger TatC PF00902.18 CCF74389.1 - 0.013 15.4 1.3 0.013 15.4 1.3 1.6 1 1 0 1 1 1 0 Sec-independent protein translocase protein (TatC) zf-C3HC4_3 PF13920.6 CCF74389.1 - 0.042 13.7 5.4 0.073 12.9 5.4 1.4 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) PHD PF00628.29 CCF74389.1 - 0.055 13.4 5.9 0.098 12.6 5.9 1.4 1 0 0 1 1 1 0 PHD-finger FANCL_C PF11793.8 CCF74389.1 - 0.14 12.3 6.1 0.59 10.4 6.1 2.1 1 1 0 1 1 1 0 FANCL C-terminal domain Zn_ribbon_17 PF17120.5 CCF74389.1 - 0.16 11.6 5.4 0.29 10.8 5.4 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type Lig_chan PF00060.26 CCF74389.1 - 0.22 11.3 0.9 0.34 10.7 0.9 1.2 1 0 0 1 1 1 0 Ligand-gated ion channel RINGv PF12906.7 CCF74389.1 - 0.42 10.8 5.1 0.97 9.6 5.1 1.6 1 0 0 1 1 1 0 RING-variant domain Helicase_C PF00271.31 CCF74390.1 - 3.7e-11 43.3 0.1 8.8e-10 38.9 0.0 2.9 1 1 1 2 2 2 1 Helicase conserved C-terminal domain HA2 PF04408.23 CCF74390.1 - 6.3e-10 39.3 0.0 1.8e-09 37.8 0.0 1.8 1 0 0 1 1 1 1 Helicase associated domain (HA2) DEAD PF00270.29 CCF74390.1 - 6.7e-07 29.2 0.0 2e-06 27.7 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 CCF74390.1 - 0.00013 22.3 0.0 0.00039 20.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain OB_NTP_bind PF07717.16 CCF74390.1 - 0.00063 20.1 0.0 0.0018 18.6 0.0 1.8 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold ATPase PF06745.13 CCF74390.1 - 0.013 14.9 0.0 0.037 13.4 0.0 1.7 1 0 0 1 1 1 0 KaiC DUF2075 PF09848.9 CCF74390.1 - 0.013 14.7 0.0 0.028 13.7 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 CCF74390.1 - 0.02 15.2 0.0 0.077 13.3 0.0 2.1 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CCF74390.1 - 0.18 11.6 0.0 0.58 9.9 0.0 1.9 1 0 0 1 1 1 0 P-loop containing region of AAA domain PP28 PF10252.9 CCF74391.1 - 1.6e-13 50.9 17.2 2.6e-13 50.2 17.2 1.4 1 1 0 1 1 1 1 Casein kinase substrate phosphoprotein PP28 Peptidase_M3 PF01432.20 CCF74391.1 - 0.14 11.4 5.1 0.2 10.8 5.1 1.2 1 0 0 1 1 1 0 Peptidase family M3 Com_YlbF PF06133.11 CCF74391.1 - 0.22 12.2 9.4 0.57 10.8 5.0 2.1 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Uds1 PF15456.6 CCF74391.1 - 1.1 9.4 13.2 0.68 10.1 11.6 1.4 1 1 1 2 2 2 0 Up-regulated During Septation HEAT_2 PF13646.6 CCF74392.1 - 3.2e-14 53.1 0.0 1.6e-07 31.6 0.0 2.5 2 0 0 2 2 2 2 HEAT repeats HEAT_PBS PF03130.16 CCF74392.1 - 4.6e-10 39.2 0.0 0.0051 17.4 0.0 4.8 4 1 0 4 4 4 3 PBS lyase HEAT-like repeat HEAT PF02985.22 CCF74392.1 - 1.1e-05 25.3 0.0 19 5.9 0.0 5.2 5 0 0 5 5 5 3 HEAT repeat DnaJ_C PF01556.18 CCF74395.1 - 1.8e-38 131.9 0.5 2.5e-38 131.5 0.5 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CCF74395.1 - 4.1e-22 78.1 1.0 8e-22 77.1 1.0 1.5 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 CCF74395.1 - 5.6e-15 55.5 18.3 1.1e-14 54.5 18.3 1.5 1 0 0 1 1 1 1 DnaJ central domain HypA PF01155.19 CCF74395.1 - 1.2 9.2 9.2 5.4 7.1 2.1 2.4 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Anti-TRAP PF15777.5 CCF74395.1 - 6.4 6.8 12.6 0.92 9.5 4.6 3.1 1 1 2 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein eIF2A PF08662.11 CCF74396.1 - 3.2e-57 193.5 0.1 7.1e-57 192.4 0.0 1.6 2 0 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A RPN1_RPN2_N PF17781.1 CCF74398.1 - 3.7e-33 115.2 0.0 6.4e-33 114.5 0.0 1.3 1 0 0 1 1 1 1 RPN1/RPN2 N-terminal domain PC_rep PF01851.22 CCF74398.1 - 1.8e-19 69.1 25.7 1.9e-07 31.2 0.1 7.5 8 0 0 8 8 8 4 Proteasome/cyclosome repeat RPN1_C PF18051.1 CCF74398.1 - 2.8e-16 59.3 0.1 6.8e-16 58.0 0.1 1.6 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal HEAT_2 PF13646.6 CCF74398.1 - 1.5e-08 34.9 3.4 0.034 14.5 0.0 4.9 5 0 0 5 5 5 2 HEAT repeats Phage_TAC_11 PF11836.8 CCF74398.1 - 0.0042 17.2 1.8 0.013 15.6 0.1 2.7 3 1 0 3 3 3 1 Phage tail tube protein, GTA-gp10 tRNA_synt_1c_R2 PF04557.15 CCF74398.1 - 0.082 13.8 0.7 6.3 7.8 0.0 2.7 3 0 0 3 3 3 0 Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 HEAT_EZ PF13513.6 CCF74398.1 - 0.1 13.1 3.5 10 6.8 0.1 4.4 3 0 0 3 3 3 0 HEAT-like repeat COG7 PF10191.9 CCF74399.1 - 5e-05 21.8 3.2 0.0015 16.9 0.0 2.6 2 0 0 2 2 2 2 Golgi complex component 7 (COG7) DUF592 PF04574.13 CCF74399.1 - 0.14 11.9 1.5 0.52 10.1 0.5 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF592) DUF1722 PF08349.11 CCF74399.1 - 0.53 10.6 2.3 4.7 7.5 0.1 3.2 3 0 0 3 3 3 0 Protein of unknown function (DUF1722) AAA PF00004.29 CCF74400.1 - 1.4e-40 138.7 0.0 2.5e-40 138.0 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF74400.1 - 4e-09 36.1 0.1 9.1e-09 35.0 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 CCF74400.1 - 8.7e-06 25.8 0.0 2.6e-05 24.2 0.0 1.8 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CCF74400.1 - 1.3e-05 25.5 0.2 0.0093 16.2 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA_16 PF13191.6 CCF74400.1 - 0.00023 21.6 0.1 0.0038 17.6 0.1 2.2 1 1 0 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 CCF74400.1 - 0.00033 20.8 0.0 0.00087 19.4 0.0 1.7 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 CCF74400.1 - 0.0011 18.7 0.0 0.0026 17.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_7 PF12775.7 CCF74400.1 - 0.0044 16.5 0.0 0.015 14.9 0.0 1.8 1 1 0 1 1 1 1 P-loop containing dynein motor region AAA_28 PF13521.6 CCF74400.1 - 0.012 15.9 0.0 0.019 15.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CCF74400.1 - 0.013 16.1 0.0 0.026 15.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 CCF74400.1 - 0.019 14.1 0.0 0.031 13.4 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 CCF74400.1 - 0.022 14.9 0.0 0.049 13.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 CCF74400.1 - 0.025 14.3 0.1 0.085 12.6 0.1 2.1 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 CCF74400.1 - 0.028 14.2 0.0 0.051 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CCF74400.1 - 0.057 13.8 0.0 0.14 12.6 0.0 1.7 1 0 0 1 1 1 0 RNA helicase Mg_chelatase PF01078.21 CCF74400.1 - 0.06 12.7 0.0 0.15 11.4 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TIP49 PF06068.13 CCF74400.1 - 0.072 12.3 0.0 0.13 11.4 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain IstB_IS21 PF01695.17 CCF74400.1 - 0.16 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Adap_comp_sub PF00928.21 CCF74401.1 - 5.5e-83 278.4 0.4 7.2e-83 278.0 0.4 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 CCF74401.1 - 5.7e-06 26.3 1.5 1.3e-05 25.2 1.5 1.5 1 0 0 1 1 1 1 Clathrin adaptor complex small chain MraZ PF02381.18 CCF74401.1 - 0.14 12.1 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 MraZ protein, putative antitoxin-like Tape_meas_lam_C PF09718.10 CCF74402.1 - 0.0065 16.6 0.1 1 9.5 0.0 2.7 2 0 0 2 2 2 2 Lambda phage tail tape-measure protein (Tape_meas_lam_C) E1-E2_ATPase PF00122.20 CCF74403.1 - 9.5e-48 162.1 3.1 9.5e-48 162.1 3.1 2.7 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 CCF74403.1 - 2.1e-35 122.1 0.1 2.1e-35 122.1 0.1 3.0 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 CCF74403.1 - 1.3e-20 74.6 0.3 9.5e-16 58.7 0.0 2.9 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 CCF74403.1 - 7.1e-17 60.9 0.0 1.8e-16 59.6 0.0 1.8 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 CCF74403.1 - 5.3e-12 45.7 0.0 1.4e-11 44.3 0.0 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 CCF74403.1 - 0.00031 20.6 1.7 0.00054 19.8 0.4 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase DUF5362 PF17319.2 CCF74403.1 - 0.0083 16.0 0.7 0.0083 16.0 0.7 3.0 3 0 0 3 3 3 1 Family of unknown function (DUF5362) DUF4181 PF13789.6 CCF74403.1 - 0.046 14.0 2.7 2.1 8.6 0.1 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4181) ubiquitin PF00240.23 CCF74404.1 - 1.2e-35 121.1 0.3 1.3e-35 120.9 0.3 1.0 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 CCF74404.1 - 1.3e-17 63.3 0.4 1.5e-17 63.2 0.4 1.0 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 CCF74404.1 - 1.1e-06 29.0 0.1 4.4e-06 27.1 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 CCF74404.1 - 0.0011 18.9 0.0 0.0012 18.7 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 CCF74404.1 - 0.0013 18.8 0.1 0.0029 17.7 0.1 1.6 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 CCF74404.1 - 0.0016 18.7 0.0 0.0018 18.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 CCF74404.1 - 0.0024 17.9 0.2 2.3 8.3 0.0 2.0 2 0 0 2 2 2 2 Ubiquitin-like domain DUF2407 PF10302.9 CCF74404.1 - 0.029 14.9 0.0 0.032 14.8 0.0 1.2 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 CCF74404.1 - 0.063 13.1 0.0 0.072 12.9 0.0 1.1 1 0 0 1 1 1 0 Silencing defective 2 N-terminal ubiquitin domain Ribosomal_S16 PF00886.19 CCF74405.1 - 7.4e-13 48.4 0.0 6.1e-12 45.4 0.0 2.0 2 0 0 2 2 2 1 Ribosomal protein S16 TPT PF03151.16 CCF74406.1 - 9e-56 189.3 8.9 1.2e-55 188.9 8.9 1.2 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 CCF74406.1 - 7.8e-09 35.8 14.0 1.5e-06 28.4 2.3 2.6 2 1 0 2 2 2 2 EamA-like transporter family G-patch PF01585.23 CCF74407.1 - 5.8e-09 35.7 1.9 1.1e-08 34.8 1.9 1.4 1 0 0 1 1 1 1 G-patch domain DrrA_P4M PF14860.6 CCF74407.1 - 0.061 13.2 0.7 0.6 10.0 0.2 2.6 2 0 0 2 2 2 0 DrrA phosphatidylinositol 4-phosphate binding domain DUF2183 PF09949.9 CCF74407.1 - 0.1 12.9 0.0 0.39 11.1 0.0 2.0 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2183) ATG16 PF08614.11 CCF74407.1 - 0.47 10.6 5.0 0.1 12.8 1.7 1.5 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) MFS_1 PF07690.16 CCF74408.1 - 6.4e-09 35.2 34.4 1.1e-08 34.4 34.4 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily IFT57 PF10498.9 CCF74409.1 - 0.0035 16.4 2.7 0.0066 15.5 2.7 1.4 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 Exonuc_VII_L PF02601.15 CCF74409.1 - 0.048 13.2 1.9 0.063 12.8 1.9 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Baculo_PEP_C PF04513.12 CCF74409.1 - 0.075 13.1 5.0 3.7 7.6 0.1 3.2 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF2130 PF09903.9 CCF74409.1 - 0.13 11.5 8.1 3.3 6.9 0.5 3.2 2 2 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2130) MreB_Mbl PF06723.13 CCF74409.1 - 0.14 11.0 0.1 0.19 10.5 0.1 1.2 1 0 0 1 1 1 0 MreB/Mbl protein APG6_N PF17675.1 CCF74409.1 - 0.15 12.6 3.0 0.075 13.6 0.9 1.5 2 0 0 2 2 2 0 Apg6 coiled-coil region MCM PF00493.23 CCF74411.1 - 2.3e-94 314.7 1.1 6e-94 313.3 0.5 1.9 2 0 0 2 2 2 1 MCM P-loop domain MCM_OB PF17207.3 CCF74411.1 - 7.9e-29 100.1 0.1 1.6e-28 99.1 0.1 1.5 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 CCF74411.1 - 3.7e-26 91.4 2.6 7.8e-26 90.3 2.6 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 CCF74411.1 - 1.6e-07 30.9 0.0 5.4e-06 25.9 0.0 2.2 1 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 CCF74411.1 - 0.007 16.2 0.0 0.016 15.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 CCF74411.1 - 0.0087 16.1 0.0 0.028 14.4 0.0 2.0 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 CCF74411.1 - 0.012 15.4 0.0 0.027 14.2 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain MCM_N PF14551.6 CCF74411.1 - 0.049 14.2 5.8 0.13 12.9 2.7 2.8 2 1 0 2 2 2 0 MCM N-terminal domain Amino_oxidase PF01593.24 CCF74412.1 - 4.1e-42 145.0 0.0 8.6e-40 137.4 0.0 2.1 2 0 0 2 2 2 2 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 CCF74412.1 - 0.00011 21.6 0.5 0.00022 20.6 0.5 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_8 PF13450.6 CCF74412.1 - 0.0002 21.5 0.9 0.00064 19.9 0.3 2.2 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 CCF74412.1 - 0.0051 16.1 0.3 0.009 15.3 0.3 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 CCF74412.1 - 0.018 14.1 1.4 0.027 13.6 1.4 1.2 1 0 0 1 1 1 0 FAD binding domain GIDA PF01134.22 CCF74412.1 - 0.02 14.0 0.8 0.029 13.4 0.8 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A FAD_oxidored PF12831.7 CCF74412.1 - 0.027 13.8 0.7 0.056 12.8 0.7 1.5 1 0 0 1 1 1 0 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 CCF74412.1 - 0.062 12.6 0.6 0.11 11.7 0.1 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Thi4 PF01946.17 CCF74412.1 - 0.13 11.5 0.1 0.26 10.5 0.1 1.4 1 0 0 1 1 1 0 Thi4 family MCM PF00493.23 CCF74413.1 - 1.1e-53 181.6 0.0 2.6e-53 180.4 0.0 1.5 2 0 0 2 2 2 1 MCM P-loop domain MCM_OB PF17207.3 CCF74413.1 - 9.7e-17 61.0 2.7 2.3e-16 59.8 2.7 1.6 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 CCF74413.1 - 6.3e-16 58.6 0.1 1.3e-15 57.6 0.1 1.5 1 0 0 1 1 1 1 MCM AAA-lid domain AAA_5 PF07728.14 CCF74413.1 - 4.6e-07 29.9 0.0 1.2e-06 28.5 0.0 1.7 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 CCF74413.1 - 6.6e-07 28.9 2.6 7.5e-05 22.2 0.0 2.6 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 CCF74413.1 - 2.1e-06 27.6 0.0 3.7e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 CCF74413.1 - 8.5e-06 25.6 0.1 0.00017 21.4 0.1 2.2 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA PF00004.29 CCF74413.1 - 3.2e-05 24.3 0.0 7.5e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF74413.1 - 0.0028 18.0 0.2 0.0083 16.5 0.2 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_30 PF13604.6 CCF74413.1 - 0.0031 17.3 0.2 0.01 15.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CCF74413.1 - 0.055 13.7 0.0 0.15 12.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain DnaJ PF00226.31 CCF74414.1 - 1.3e-24 86.1 1.7 1.9e-24 85.5 1.7 1.3 1 0 0 1 1 1 1 DnaJ domain PDEase_I PF00233.19 CCF74415.1 - 2.8e-63 213.8 2.0 4.7e-63 213.1 2.0 1.4 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase HD PF01966.22 CCF74415.1 - 0.044 14.0 0.1 0.095 12.9 0.1 1.6 1 0 0 1 1 1 0 HD domain Ribosomal_S18 PF01084.20 CCF74416.1 - 4.1e-14 52.5 0.6 7.8e-14 51.6 0.1 1.8 2 0 0 2 2 2 1 Ribosomal protein S18 DUF3091 PF11291.8 CCF74416.1 - 0.079 13.1 0.3 0.18 12.0 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3091) GRAM PF02893.20 CCF74417.1 - 3.4e-12 46.2 2.6 4.4e-12 45.9 0.4 2.5 2 0 0 2 2 2 1 GRAM domain SH3_2 PF07653.17 CCF74417.1 - 0.00058 19.5 0.0 0.0013 18.4 0.0 1.5 1 0 0 1 1 1 1 Variant SH3 domain Methyltransf_15 PF09445.10 CCF74418.1 - 2.8e-19 69.3 0.1 6.3e-19 68.1 0.1 1.7 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RNA_GG_bind PF10258.9 CCF74418.1 - 1.1e-08 35.0 0.0 2.3e-08 34.0 0.0 1.6 1 0 0 1 1 1 1 PHAX RNA-binding domain Methyltransf_25 PF13649.6 CCF74418.1 - 0.003 18.2 0.0 0.0091 16.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 CCF74418.1 - 0.0038 17.0 0.1 0.0038 17.0 0.1 1.7 2 0 0 2 2 2 1 Met-10+ like-protein Methyltransf_23 PF13489.6 CCF74418.1 - 0.02 14.7 0.0 0.58 10.0 0.0 2.3 1 1 1 2 2 2 0 Methyltransferase domain Adap_comp_sub PF00928.21 CCF74419.1 - 4.9e-41 140.8 0.1 6.7e-41 140.4 0.1 1.2 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 CCF74419.1 - 2.5e-06 27.5 0.8 4.2e-06 26.7 0.8 1.3 1 0 0 1 1 1 1 Clathrin adaptor complex small chain RIH_assoc PF08454.11 CCF74419.1 - 0.11 12.3 0.3 0.27 11.1 0.3 1.7 1 0 0 1 1 1 0 RyR and IP3R Homology associated GDPD PF03009.17 CCF74420.1 - 2.2e-11 44.0 0.0 3.5e-11 43.3 0.0 1.3 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family RHH_6 PF16762.5 CCF74420.1 - 0.16 12.6 0.0 0.53 10.9 0.0 1.9 1 1 0 1 1 1 0 Ribbon-helix-helix domain Dynamin_N PF00350.23 CCF74421.1 - 4.4e-12 46.4 0.0 1.1e-11 45.1 0.0 1.7 1 0 0 1 1 1 1 Dynamin family MMR_HSR1 PF01926.23 CCF74421.1 - 0.00092 19.3 0.0 0.0032 17.6 0.0 2.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase adh_short PF00106.25 CCF74423.1 - 2.7e-27 95.5 0.0 3.7e-13 49.4 0.0 2.2 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 CCF74423.1 - 1.1e-12 48.0 0.0 1.8e-05 24.5 0.0 2.1 2 0 0 2 2 2 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CCF74423.1 - 0.012 15.6 0.0 3.2 7.6 0.0 2.2 2 0 0 2 2 2 0 KR domain Nrap PF03813.14 CCF74424.1 - 2.4e-12 47.2 0.8 7.9e-12 45.5 0.3 2.1 2 0 0 2 2 2 1 Nrap protein domain 1 Nrap_D5 PF17406.2 CCF74424.1 - 1.4e-11 44.5 0.0 8.5e-09 35.4 0.0 2.4 2 0 0 2 2 2 2 Nrap protein PAP/OAS1-like domain 5 Nrap_D4 PF17405.2 CCF74424.1 - 9.8e-08 31.6 0.0 3.7e-07 29.7 0.0 1.8 1 1 0 1 1 1 1 Nrap protein nucleotidyltransferase domain 4 Nrap_D2 PF17403.2 CCF74424.1 - 1e-07 31.8 0.1 2.4e-07 30.6 0.1 1.6 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain Nrap_D3 PF17404.2 CCF74424.1 - 0.0009 19.4 0.0 0.0022 18.1 0.0 1.7 1 0 0 1 1 1 1 Nrap protein domain 3 RecG_N PF17190.4 CCF74425.1 - 0.23 12.2 0.9 0.64 10.8 0.1 2.1 3 0 0 3 3 3 0 RecG N-terminal helical domain zf-RING_2 PF13639.6 CCF74426.1 - 1.3e-09 38.2 12.5 1.3e-09 38.2 12.5 1.9 2 0 0 2 2 2 1 Ring finger domain zf-rbx1 PF12678.7 CCF74426.1 - 2.6e-08 34.0 12.4 9.9e-08 32.2 12.4 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 CCF74426.1 - 7.2e-06 25.7 11.9 1.9e-05 24.4 11.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF74426.1 - 9.4e-06 25.4 12.7 2e-05 24.3 12.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 CCF74426.1 - 0.00017 21.4 8.6 0.00017 21.4 8.6 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF74426.1 - 0.001 19.1 8.6 0.0022 18.0 8.6 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 CCF74426.1 - 0.0013 18.7 10.6 0.0027 17.6 10.6 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 CCF74426.1 - 0.0014 18.7 8.5 0.026 14.5 8.5 2.3 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Prok-RING_4 PF14447.6 CCF74426.1 - 0.0015 18.3 8.5 0.0036 17.1 8.5 1.7 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_11 PF17123.5 CCF74426.1 - 0.0038 16.9 7.4 0.0099 15.6 7.4 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-HC5HC2H PF13771.6 CCF74426.1 - 0.0087 16.3 4.5 0.021 15.0 4.5 1.7 1 0 0 1 1 1 1 PHD-like zinc-binding domain DUF5398 PF17376.2 CCF74426.1 - 0.015 15.9 0.1 0.18 12.5 0.0 2.4 1 1 1 2 2 2 0 Family of unknown function (DUF5398) zf-HC5HC2H_2 PF13832.6 CCF74426.1 - 0.054 13.7 3.2 0.11 12.7 3.2 1.5 1 0 0 1 1 1 0 PHD-zinc-finger like domain FANCL_C PF11793.8 CCF74426.1 - 0.42 10.8 9.9 1.6 9.0 9.9 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain zf-C3H2C3 PF17122.5 CCF74426.1 - 0.59 10.2 8.4 1.2 9.3 8.4 1.5 1 0 0 1 1 1 0 Zinc-finger zf-Nse PF11789.8 CCF74426.1 - 1 9.2 6.4 2.1 8.2 6.4 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING-like PF08746.11 CCF74426.1 - 2.8 8.3 9.7 6.4 7.2 9.7 1.6 1 0 0 1 1 1 0 RING-like domain Zn_ribbon_17 PF17120.5 CCF74426.1 - 4.4 7.0 15.6 0.22 11.2 8.8 2.0 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type Ribosomal_L1 PF00687.21 CCF74427.1 - 1e-19 71.1 0.0 2.5e-19 69.8 0.0 1.6 1 1 0 1 1 1 1 Ribosomal protein L1p/L10e family partial_CstF PF15861.5 CCF74427.1 - 0.068 13.0 0.0 0.18 11.6 0.0 1.7 1 0 0 1 1 1 0 Partial cleavage stimulation factor domain Ribosomal_S25 PF03297.15 CCF74428.1 - 5.7e-37 126.0 8.3 6.3e-37 125.8 8.3 1.0 1 0 0 1 1 1 1 S25 ribosomal protein RNA_pol_Rpc34 PF05158.12 CCF74429.1 - 6.5e-35 121.1 5.5 3.7e-28 98.9 0.3 3.0 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit RRM_1 PF00076.22 CCF74430.1 - 8.4e-05 22.3 0.0 0.00021 21.0 0.0 1.6 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF74430.1 - 0.019 14.8 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 Occluded RNA-recognition motif Pox_polyA_pol_C PF12629.7 CCF74430.1 - 0.025 14.4 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 Poxvirus poly(A) polymerase C-terminal domain DMRT-like PF15791.5 CCF74430.1 - 0.05 14.0 0.2 0.078 13.4 0.2 1.3 1 0 0 1 1 1 0 Doublesex-and mab-3-related transcription factor C1 and C2 RRM_1 PF00076.22 CCF74431.1 - 6.4e-11 41.9 0.1 3.9e-10 39.4 0.1 2.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF1768 PF08719.11 CCF74431.1 - 1.4e-09 38.4 0.0 2.7e-09 37.5 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1768) FHA PF00498.26 CCF74431.1 - 9.2e-08 32.3 0.0 2.2e-07 31.1 0.0 1.7 1 0 0 1 1 1 1 FHA domain Nup35_RRM_2 PF14605.6 CCF74431.1 - 8.8e-06 25.6 0.0 4e-05 23.5 0.0 2.1 2 0 0 2 2 2 1 Nup53/35/40-type RNA recognition motif DUF1699 PF08004.11 CCF74431.1 - 0.029 14.0 0.2 0.23 11.1 0.0 2.5 2 1 1 3 3 3 0 Protein of unknown function (DUF1699) Yop-YscD_cpl PF16697.5 CCF74431.1 - 0.071 13.4 0.0 0.18 12.1 0.0 1.7 1 0 0 1 1 1 0 Inner membrane component of T3SS, cytoplasmic domain AMA-1 PF02430.15 CCF74434.1 - 1.7e-84 284.5 5.1 4.2e-84 283.2 2.9 1.9 2 0 0 2 2 2 1 Apical membrane antigen 1 ECSCR PF15820.5 CCF74434.1 - 0.059 13.2 0.1 0.13 12.1 0.1 1.5 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator DUF5305 PF17231.2 CCF74434.1 - 0.064 12.7 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5305) 7TM_GPCR_Srw PF10324.9 CCF74434.1 - 0.12 11.7 0.0 0.18 11.0 0.0 1.2 1 0 0 1 1 1 0 Serpentine type 7TM GPCR chemoreceptor Srw EphA2_TM PF14575.6 CCF74434.1 - 0.16 12.8 0.0 0.34 11.8 0.0 1.5 1 0 0 1 1 1 0 Ephrin type-A receptor 2 transmembrane domain SieB PF14163.6 CCF74434.1 - 0.17 11.4 0.1 0.29 10.6 0.1 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B NfeD PF01957.18 CCF74434.1 - 0.17 12.3 0.0 0.38 11.2 0.0 1.6 1 0 0 1 1 1 0 NfeD-like C-terminal, partner-binding Stevor PF17410.2 CCF74434.1 - 0.2 11.2 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame CDC50 PF03381.15 CCF74435.1 - 7.4e-27 94.6 0.2 1.3e-26 93.8 0.2 1.3 1 0 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Nore1-SARAH PF16517.5 CCF74437.1 - 0.027 14.4 0.1 0.062 13.2 0.1 1.6 1 0 0 1 1 1 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain FAM76 PF16046.5 CCF74438.1 - 2.7e-26 92.6 37.5 4.2e-26 92.0 37.4 1.4 1 1 0 1 1 1 1 FAM76 protein UPF0242 PF06785.11 CCF74438.1 - 0.00031 20.9 8.6 0.0005 20.2 8.6 1.3 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Golgin_A5 PF09787.9 CCF74438.1 - 0.002 17.7 7.2 0.0042 16.6 7.2 1.6 1 0 0 1 1 1 1 Golgin subfamily A member 5 Fmp27_WPPW PF10359.9 CCF74438.1 - 0.0027 16.6 3.9 0.0036 16.2 3.9 1.2 1 0 0 1 1 1 1 RNA pol II promoter Fmp27 protein domain KLRAQ PF10205.9 CCF74438.1 - 0.0046 17.2 12.8 0.13 12.6 0.7 2.6 1 1 1 2 2 2 2 Predicted coiled-coil domain-containing protein Csm1_N PF18504.1 CCF74438.1 - 0.031 14.6 1.8 0.031 14.6 1.8 2.5 1 1 1 2 2 2 0 Csm1 N-terminal domain Bap31_Bap29_C PF18035.1 CCF74438.1 - 0.036 14.1 6.7 3.4 7.7 6.8 3.2 1 1 0 1 1 1 0 Bap31/Bap29 cytoplasmic coiled-coil domain DUF641 PF04859.12 CCF74438.1 - 0.047 14.0 0.5 0.047 14.0 0.5 2.5 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) HalX PF08663.10 CCF74438.1 - 0.11 12.8 4.8 0.39 11.1 0.8 2.8 2 1 1 3 3 3 0 HalX domain EHN PF06441.12 CCF74438.1 - 0.12 12.8 2.0 0.18 12.1 0.9 1.9 2 0 0 2 2 2 0 Epoxide hydrolase N terminus Spc7 PF08317.11 CCF74438.1 - 0.17 10.8 11.7 0.11 11.4 4.8 2.0 1 1 1 2 2 2 0 Spc7 kinetochore protein SOGA PF11365.8 CCF74438.1 - 0.23 12.6 6.1 4.8 8.4 1.6 2.6 1 1 1 2 2 2 0 Protein SOGA DUF4407 PF14362.6 CCF74438.1 - 0.42 9.9 6.6 0.62 9.4 6.6 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) CENP-Q PF13094.6 CCF74438.1 - 0.46 10.7 8.3 0.79 9.9 8.3 1.4 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit ACCA PF03255.14 CCF74438.1 - 0.5 10.2 3.7 0.93 9.4 3.7 1.5 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DZR PF12773.7 CCF74438.1 - 0.58 10.2 36.8 4.4 7.4 10.0 3.7 1 1 2 3 3 3 0 Double zinc ribbon TMF_TATA_bd PF12325.8 CCF74438.1 - 0.81 9.9 8.1 11 6.3 8.1 2.4 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding Spc42p PF11544.8 CCF74438.1 - 1.1 9.3 9.4 1.5 8.8 0.6 2.8 1 1 1 2 2 2 0 Spindle pole body component Spc42p DUF4140 PF13600.6 CCF74438.1 - 1.1 9.7 7.1 0.4 11.1 0.5 2.7 1 1 2 3 3 3 0 N-terminal domain of unknown function (DUF4140) SlyX PF04102.12 CCF74438.1 - 2.6 8.7 8.4 8.9 7.0 0.5 2.7 1 1 1 2 2 2 0 SlyX TSC22 PF01166.18 CCF74438.1 - 3.7 7.9 8.0 1.8 8.9 1.0 3.0 1 1 2 3 3 3 0 TSC-22/dip/bun family Uso1_p115_C PF04871.13 CCF74438.1 - 4.6 7.6 10.5 50 4.3 9.1 2.4 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region HA2 PF04408.23 CCF74439.1 - 3.5e-21 75.5 0.0 1.1e-20 73.9 0.0 1.9 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 CCF74439.1 - 4.3e-19 68.6 0.0 1.1e-18 67.4 0.0 1.7 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 CCF74439.1 - 1.8e-10 41.1 0.6 1.2e-09 38.5 0.6 2.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF74439.1 - 4e-07 30.0 0.0 8.7e-07 28.9 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase T2SSE PF00437.20 CCF74439.1 - 7.3e-05 22.0 0.0 0.00015 21.0 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_22 PF13401.6 CCF74439.1 - 0.00055 20.2 0.0 0.0021 18.4 0.0 2.0 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CCF74439.1 - 0.0071 16.7 0.0 0.015 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CCF74439.1 - 0.0092 15.7 0.0 0.019 14.7 0.0 1.4 1 0 0 1 1 1 1 AAA domain SRP54 PF00448.22 CCF74439.1 - 0.12 12.0 0.0 0.22 11.2 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 CCF74439.1 - 0.14 12.3 0.0 0.66 10.1 0.0 2.2 1 1 0 1 1 1 0 AAA domain PhoH PF02562.16 CCF74439.1 - 0.14 11.6 0.0 0.33 10.4 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_16 PF13191.6 CCF74439.1 - 0.18 12.2 0.7 0.51 10.7 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain Ras PF00071.22 CCF74440.1 - 2.4e-58 196.3 0.1 2.9e-58 196.1 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF74440.1 - 5.7e-34 116.9 0.0 1.1e-33 116.0 0.0 1.5 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF74440.1 - 2.2e-13 50.0 0.1 2.8e-13 49.7 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 CCF74440.1 - 1.7e-05 24.8 0.0 2.6e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF74440.1 - 0.00053 19.4 0.0 0.00069 19.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 CCF74440.1 - 0.025 14.5 0.1 6.3 6.7 0.1 2.2 2 0 0 2 2 2 0 RsgA GTPase EFP_N PF08207.12 CCF74441.1 - 2e-07 30.9 0.2 6.1e-07 29.4 0.0 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 CCF74441.1 - 0.00028 20.8 0.5 0.00048 20.1 0.5 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) OB domain DUF1764 PF08576.10 CCF74442.1 - 4.8e-23 81.9 5.2 5.4e-23 81.8 5.2 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF1764) UPF0020 PF01170.18 CCF74443.1 - 8.5e-09 35.4 0.1 2.1e-06 27.6 0.1 2.5 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 CCF74443.1 - 4.8e-06 26.5 0.0 0.0013 18.4 0.0 2.5 2 0 0 2 2 2 2 DNA methylase MethyltransfD12 PF02086.15 CCF74443.1 - 0.014 15.1 0.0 0.17 11.6 0.0 2.3 1 1 1 2 2 2 0 D12 class N6 adenine-specific DNA methyltransferase N6_Mtase PF02384.16 CCF74443.1 - 0.029 13.6 0.0 0.25 10.5 0.0 2.2 1 1 0 1 1 1 0 N-6 DNA Methylase Cons_hypoth95 PF03602.15 CCF74443.1 - 0.051 13.2 0.0 0.53 9.9 0.0 2.2 1 1 0 1 1 1 0 Conserved hypothetical protein 95 Methyltransf_15 PF09445.10 CCF74443.1 - 0.056 13.0 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 RNA cap guanine-N2 methyltransferase TP_methylase PF00590.20 CCF74444.1 - 4.9e-15 56.0 0.0 1.1e-14 54.9 0.0 1.6 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases ADK PF00406.22 CCF74445.1 - 4.9e-18 65.7 0.0 6.3e-18 65.3 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_33 PF13671.6 CCF74445.1 - 1.1e-11 45.1 0.0 1.7e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain ADK_lid PF05191.14 CCF74445.1 - 3.8e-09 36.4 0.0 9.7e-09 35.1 0.0 1.7 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_17 PF13207.6 CCF74445.1 - 1.2e-08 35.5 0.0 1.8e-08 34.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CCF74445.1 - 9.8e-05 22.9 0.0 0.00016 22.2 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CCF74445.1 - 0.00032 21.0 0.0 0.00094 19.5 0.0 1.9 1 1 1 2 2 2 1 AAA domain Sigma54_activ_2 PF14532.6 CCF74445.1 - 0.032 14.4 0.0 0.056 13.6 0.0 1.4 1 1 0 1 1 1 0 Sigma-54 interaction domain AAA_28 PF13521.6 CCF74445.1 - 0.039 14.2 0.0 0.063 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 CCF74445.1 - 0.044 13.7 0.0 0.089 12.7 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain ABC_tran PF00005.27 CCF74445.1 - 0.057 13.9 0.2 0.31 11.6 0.0 2.0 1 1 1 2 2 2 0 ABC transporter AAA_29 PF13555.6 CCF74445.1 - 0.058 13.2 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain Zeta_toxin PF06414.12 CCF74445.1 - 0.068 12.4 0.0 0.1 11.9 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA PF00004.29 CCF74445.1 - 0.069 13.6 0.0 0.14 12.6 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 CCF74445.1 - 0.099 13.0 0.0 0.28 11.6 0.0 1.9 2 1 0 2 2 2 0 RNA helicase AAA_16 PF13191.6 CCF74445.1 - 0.1 13.0 0.0 0.27 11.6 0.0 1.7 1 1 0 1 1 1 0 AAA ATPase domain zf-C2H2_4 PF13894.6 CCF74446.1 - 1.2e-06 28.8 4.3 0.0036 18.0 0.3 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 CCF74446.1 - 1.4e-05 25.2 4.6 0.006 17.0 0.3 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 CCF74446.1 - 0.0038 17.5 6.3 0.12 12.7 0.9 2.5 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2H2_6 PF13912.6 CCF74446.1 - 0.027 14.4 2.1 0.27 11.3 1.0 2.2 1 1 1 2 2 2 0 C2H2-type zinc finger zf-C2H2_2 PF12756.7 CCF74446.1 - 0.071 13.5 4.3 3.8 7.9 0.8 2.3 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-Di19 PF05605.12 CCF74446.1 - 0.076 13.3 5.3 1.4 9.3 1.9 2.2 1 1 1 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding DUF2389 PF09493.10 CCF74446.1 - 0.16 12.6 1.3 0.52 11.0 0.3 2.1 2 0 0 2 2 2 0 Tryptophan-rich protein (DUF2389) DUF3675 PF12428.8 CCF74447.1 - 0.16 12.5 0.4 0.28 11.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3675) TBP PF00352.21 CCF74450.1 - 9.4e-53 176.1 0.5 4.1e-25 87.5 0.0 2.2 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF1955 PF09205.10 CCF74450.1 - 0.00022 21.0 0.5 0.011 15.4 0.1 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1955) PPR_3 PF13812.6 CCF74451.1 - 7.8e-07 29.1 0.0 2.6e-06 27.4 0.0 1.9 1 0 0 1 1 1 1 Pentatricopeptide repeat domain Snapin_Pallidin PF14712.6 CCF74451.1 - 0.029 14.8 3.7 2.8 8.4 0.8 3.0 2 1 1 3 3 3 0 Snapin/Pallidin Wtap PF17098.5 CCF74452.1 - 7.6e-24 84.4 3.1 1e-23 84.0 3.1 1.2 1 0 0 1 1 1 1 WTAP/Mum2p family KLRAQ PF10205.9 CCF74452.1 - 0.019 15.2 3.4 0.051 13.8 1.0 2.5 1 1 1 2 2 2 0 Predicted coiled-coil domain-containing protein bZIP_1 PF00170.21 CCF74452.1 - 0.38 10.9 13.3 0.94 9.6 0.8 3.9 3 1 1 4 4 4 0 bZIP transcription factor FlaC_arch PF05377.11 CCF74452.1 - 0.89 10.0 0.1 0.89 10.0 0.1 3.2 4 0 0 4 4 4 0 Flagella accessory protein C (FlaC) FtsX_ECD PF18075.1 CCF74453.1 - 0.025 15.2 0.1 0.033 14.8 0.1 1.2 1 0 0 1 1 1 0 FtsX extracellular domain Myb_Cef PF11831.8 CCF74455.1 - 4.2e-20 72.3 0.3 4.2e-20 72.3 0.3 3.1 2 2 0 2 2 2 1 pre-mRNA splicing factor component Myb_DNA-binding PF00249.31 CCF74455.1 - 1.7e-19 69.7 6.9 8.6e-11 41.9 1.3 2.8 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF74455.1 - 6.6e-16 58.3 4.8 3.6e-11 43.1 2.0 2.8 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 CCF74455.1 - 0.11 12.6 0.7 0.54 10.5 0.6 2.2 1 1 0 1 1 1 0 SANT/Myb-like domain of DAMP1 RAP PF08373.10 CCF74456.1 - 2.1e-15 56.6 2.0 5.4e-15 55.2 2.0 1.8 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 CCF74456.1 - 5.4e-08 32.9 0.0 1.5e-07 31.5 0.0 1.6 1 0 0 1 1 1 1 REase_MTES_1575 DUF559 PF04480.12 CCF74456.1 - 0.0027 17.5 0.0 0.0065 16.3 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF559) LAMTOR PF15454.6 CCF74457.1 - 0.019 15.6 0.0 0.049 14.2 0.0 1.6 1 0 0 1 1 1 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator DUF2576 PF10845.8 CCF74458.1 - 0.096 12.3 0.4 0.41 10.3 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2576) DNA_pol3_delta2 PF13177.6 CCF74460.1 - 1.3e-12 47.8 0.8 3.4e-12 46.4 0.2 1.8 2 0 0 2 2 2 1 DNA polymerase III, delta subunit Rad17 PF03215.15 CCF74460.1 - 0.00019 21.4 0.0 0.00071 19.5 0.0 2.0 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 CCF74460.1 - 0.018 15.4 0.1 0.14 12.5 0.0 2.3 2 1 0 2 2 2 0 AAA ATPase domain RNA_helicase PF00910.22 CCF74460.1 - 0.039 14.3 0.0 0.085 13.3 0.0 1.6 1 0 0 1 1 1 0 RNA helicase CNOT1_CAF1_bind PF16415.5 CCF74461.1 - 2.8e-64 216.6 0.0 5.2e-64 215.7 0.0 1.4 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 CAF1-binding domain CNOT1_TTP_bind PF16417.5 CCF74461.1 - 1.8e-32 112.0 0.5 4.9e-32 110.6 0.5 1.7 1 0 0 1 1 1 1 CCR4-NOT transcription complex subunit 1 TTP binding domain DUF3819 PF12842.7 CCF74461.1 - 9.8e-29 100.2 0.3 9.8e-29 100.2 0.3 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF3819) Not1 PF04054.15 CCF74461.1 - 8.5e-19 67.7 0.1 8.5e-19 67.7 0.1 2.2 2 0 0 2 2 2 1 CCR4-Not complex component, Not1 Patatin PF01734.22 CCF74461.1 - 0.018 15.2 26.3 2.8e+03 -1.7 26.4 2.8 1 1 0 1 1 1 0 Patatin-like phospholipase SOG2 PF10428.9 CCF74461.1 - 0.42 9.8 14.9 5.1 6.2 15.3 2.1 2 0 0 2 2 2 0 RAM signalling pathway protein GKAP PF03359.13 CCF74461.1 - 0.66 9.5 5.5 1.1 8.7 5.5 1.3 1 0 0 1 1 1 0 Guanylate-kinase-associated protein (GKAP) protein RIFIN PF02009.16 CCF74461.1 - 6.3 6.6 18.4 11 5.8 18.4 1.3 1 0 0 1 1 1 0 Rifin zf-CHY PF05495.12 CCF74462.1 - 2.1e-11 44.1 11.5 2.1e-11 44.1 11.5 3.9 2 1 1 3 3 3 2 CHY zinc finger Myb_DNA-binding PF00249.31 CCF74462.1 - 8.3e-07 29.1 0.4 8.3e-07 29.1 0.4 2.1 2 0 0 2 2 2 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF74462.1 - 0.00012 22.3 0.1 0.00026 21.2 0.1 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain DUF3349 PF11829.8 CCF74462.1 - 0.11 13.3 0.0 0.33 11.7 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3349) FmiP_Thoc5 PF09766.9 CCF74464.1 - 4.7e-05 22.9 3.5 6.9e-05 22.3 3.5 1.1 1 0 0 1 1 1 1 Fms-interacting protein/Thoc5 Tmemb_18A PF09771.9 CCF74466.1 - 0.1 13.0 0.3 0.1 13.0 0.3 2.8 3 0 0 3 3 3 0 Transmembrane protein 188 SNARE_assoc PF09335.11 CCF74467.1 - 1.3e-14 54.7 8.6 2.5e-14 53.8 8.6 1.6 1 0 0 1 1 1 1 SNARE associated Golgi protein Flp1_like PF16982.5 CCF74467.1 - 0.31 10.5 3.3 0.76 9.2 3.3 1.6 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain TMEM72 PF16054.5 CCF74467.1 - 1 9.0 8.4 1.1 8.9 5.7 2.1 1 1 1 2 2 2 0 Transmembrane protein family 72 HATPase_c PF02518.26 CCF74468.1 - 1.3e-10 41.7 0.1 3.3e-10 40.5 0.1 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 CCF74468.1 - 1.3e-09 38.0 0.0 2.2e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3189 PF11385.8 CCF74468.1 - 0.017 14.9 0.1 7.3 6.4 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3189) HATPase_c_5 PF14501.6 CCF74468.1 - 0.1 12.5 0.2 0.29 11.1 0.2 1.8 1 0 0 1 1 1 0 GHKL domain DUF5094 PF17015.5 CCF74468.1 - 0.12 12.5 0.1 17 5.5 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF5094) Sugar_tr PF00083.24 CCF74469.1 - 1.4e-70 238.4 29.2 1.9e-70 238.0 29.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 CCF74469.1 - 6.9e-29 100.9 41.9 5.3e-25 88.1 17.9 1.9 1 1 1 2 2 2 2 Major Facilitator Superfamily TRI12 PF06609.13 CCF74469.1 - 5.5e-05 21.8 3.1 5.5e-05 21.8 3.1 2.5 2 1 0 2 2 2 2 Fungal trichothecene efflux pump (TRI12) DUF5453 PF17534.2 CCF74469.1 - 5.3 7.0 17.1 3.3 7.6 4.5 3.4 3 0 0 3 3 3 0 Family of unknown function (DUF5453) ubiquitin PF00240.23 CCF74470.1 - 8.5e-105 342.6 10.1 4e-34 116.2 0.3 3.1 3 0 0 3 3 3 3 Ubiquitin family Rad60-SLD PF11976.8 CCF74470.1 - 1.3e-50 169.1 10.7 4.3e-16 58.5 0.4 3.1 3 0 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ribosomal_L40e PF01020.17 CCF74470.1 - 8.5e-30 102.4 12.0 1.5e-29 101.7 12.0 1.4 1 0 0 1 1 1 1 Ribosomal L40e family Ubiquitin_2 PF14560.6 CCF74470.1 - 8e-20 71.1 3.2 0.0001 22.7 0.1 4.5 3 3 0 3 3 3 3 Ubiquitin-like domain TBK1_ULD PF18396.1 CCF74470.1 - 3e-12 46.3 1.7 0.02 14.8 0.1 3.2 3 0 0 3 3 3 3 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 CCF74470.1 - 1.7e-11 44.2 0.8 0.052 13.6 0.0 3.9 3 3 0 3 3 3 3 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 CCF74470.1 - 3e-11 43.5 2.5 0.043 14.2 0.1 3.2 3 0 0 3 3 3 3 Ubiquitin-like domain DUF2407 PF10302.9 CCF74470.1 - 5.5e-09 36.5 0.2 0.43 11.1 0.0 3.3 1 1 2 3 3 3 3 DUF2407 ubiquitin-like domain Sde2_N_Ubi PF13019.6 CCF74470.1 - 4.2e-06 26.7 0.0 2.5 7.9 0.0 3.1 1 1 2 3 3 3 3 Silencing defective 2 N-terminal ubiquitin domain Ubiquitin_4 PF18036.1 CCF74470.1 - 2.2e-05 24.4 14.1 23 5.1 0.0 6.0 6 0 0 6 6 6 0 Ubiquitin-like domain DUF2870 PF11069.8 CCF74470.1 - 0.00048 20.5 0.0 22 5.5 0.0 3.7 3 0 0 3 3 3 0 Protein of unknown function (DUF2870) Methyltrans_RNA PF04452.14 CCF74470.1 - 0.0014 18.0 0.1 1.7 7.9 0.0 2.3 2 0 0 2 2 2 2 RNA methyltransferase RBD PF02196.15 CCF74470.1 - 0.0016 18.5 0.0 30 4.8 0.0 3.5 3 0 0 3 3 3 0 Raf-like Ras-binding domain UDP-g_GGTase PF06427.11 CCF74470.1 - 0.0027 17.8 1.4 4.8 7.3 0.0 3.2 4 0 0 4 4 3 2 UDP-glucose:Glycoprotein Glucosyltransferase DUF3861 PF12977.7 CCF74470.1 - 0.0046 17.1 0.3 38 4.6 0.0 3.2 3 0 0 3 3 3 0 Domain of Unknown Function with PDB structure (DUF3861) DUF969 PF06149.12 CCF74470.1 - 0.0095 15.4 0.0 19 4.6 0.0 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF969) FlgD_ig PF13860.6 CCF74470.1 - 0.047 13.6 2.4 52 3.8 0.1 3.3 3 0 0 3 3 3 0 FlgD Ig-like domain Big_7 PF17957.1 CCF74470.1 - 0.048 14.4 0.0 1.2e+02 3.5 0.0 3.1 3 0 0 3 3 3 0 Bacterial Ig domain GDYXXLXY PF14345.6 CCF74470.1 - 0.11 12.3 0.1 1e+02 2.7 0.0 3.2 3 0 0 3 3 3 0 GDYXXLXY protein CorA PF01544.18 CCF74470.1 - 0.13 11.5 0.1 71 2.6 0.0 3.0 3 0 0 3 3 3 0 CorA-like Mg2+ transporter protein ORF11CD3 PF10549.9 CCF74470.1 - 0.14 12.3 0.0 82 3.4 0.0 3.5 3 0 0 3 3 3 0 ORF11CD3 domain TraK PF06586.11 CCF74470.1 - 0.15 11.7 0.1 83 2.7 0.0 3.0 3 0 0 3 3 3 0 TraK protein Phage_sheath_1N PF17481.2 CCF74470.1 - 0.16 12.4 1.6 29 5.2 0.3 3.0 1 1 1 2 2 2 0 Phage tail sheath protein beta-sandwich domain ProRS-C_2 PF09181.10 CCF74470.1 - 0.18 12.0 1.1 1.2e+02 3.0 0.0 3.2 3 0 0 3 3 3 0 Prolyl-tRNA synthetase, C-terminal TF_Zn_Ribbon PF08271.12 CCF74471.1 - 0.34 10.5 2.5 0.73 9.4 2.5 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding PDCD2_C PF04194.13 CCF74473.1 - 1.3e-25 90.5 4.1 3.2e-25 89.2 0.6 2.3 2 0 0 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain TF_Zn_Ribbon PF08271.12 CCF74473.1 - 0.21 11.1 0.2 0.21 11.1 0.2 3.9 4 0 0 4 4 4 0 TFIIB zinc-binding Cir_N PF10197.9 CCF74474.1 - 1.4e-10 41.1 10.6 1.4e-10 41.1 10.6 3.7 4 0 0 4 4 4 1 N-terminal domain of CBF1 interacting co-repressor CIR Slu7 PF11708.8 CCF74474.1 - 0.0012 18.7 16.9 0.0029 17.4 13.5 2.7 2 1 0 2 2 2 1 Pre-mRNA splicing Prp18-interacting factor WDCP PF15390.6 CCF74474.1 - 0.23 9.8 4.3 0.24 9.8 4.3 1.0 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family GTP_EFTU PF00009.27 CCF74475.1 - 2.7e-57 193.4 0.0 4.3e-57 192.8 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 CCF74475.1 - 8.9e-08 32.1 0.0 1.9e-07 31.0 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 CCF74475.1 - 6.1e-05 23.0 0.0 0.00013 21.9 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 CCF74475.1 - 0.077 13.4 0.0 0.19 12.1 0.0 1.7 1 0 0 1 1 1 0 Elongation factor Tu domain 2 SRPRB PF09439.10 CCF74475.1 - 0.08 12.4 0.0 0.23 10.9 0.0 1.7 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Ntox37 PF15535.6 CCF74475.1 - 0.16 12.4 0.3 0.31 11.5 0.3 1.4 1 0 0 1 1 1 0 Bacterial toxin 37 Inhibitor_I71 PF12628.7 CCF74476.1 - 4.1e-08 33.3 0.7 0.0037 17.1 0.1 2.1 1 1 0 2 2 2 2 Falstatin, cysteine peptidase inhibitor Inhibitor_I42 PF09394.10 CCF74476.1 - 4e-07 30.4 0.1 1.1e-06 29.0 0.1 1.6 1 1 0 1 1 1 1 Chagasin family peptidase inhibitor I42 NAP PF00956.18 CCF74477.1 - 2.4e-17 63.0 7.7 1.2e-12 47.6 0.8 2.6 1 1 1 2 2 2 2 Nucleosome assembly protein (NAP) Mst1_SARAH PF11629.8 CCF74477.1 - 0.009 16.1 1.0 0.023 14.7 1.0 1.7 1 0 0 1 1 1 1 C terminal SARAH domain of Mst1 Hydrolase_3 PF08282.12 CCF74478.1 - 4.5e-45 154.4 3.4 5.1e-45 154.2 3.4 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CCF74478.1 - 7.8e-07 29.6 0.0 2.4e-05 24.7 0.0 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 CCF74478.1 - 8e-07 28.8 0.0 6.6e-05 22.6 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Trehalose_PPase PF02358.16 CCF74478.1 - 0.0031 16.7 0.0 0.014 14.5 0.0 1.9 2 0 0 2 2 2 1 Trehalose-phosphatase HAD PF12710.7 CCF74478.1 - 0.078 13.4 0.3 0.14 12.6 0.0 1.5 2 0 0 2 2 2 0 haloacid dehalogenase-like hydrolase Pns11_12 PF17464.2 CCF74480.1 - 0.25 11.0 0.6 0.36 10.5 0.6 1.1 1 0 0 1 1 1 0 Non-structural protein 11 and 12 Pkinase PF00069.25 CCF74481.1 - 4.7e-78 262.2 0.0 7.8e-78 261.5 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74481.1 - 4e-39 134.5 0.0 5.7e-39 134.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 CCF74481.1 - 2.9e-23 79.6 23.3 1.8e-06 27.1 1.4 5.2 6 0 0 6 6 5 4 EF hand EF-hand_5 PF13202.6 CCF74481.1 - 2e-21 74.5 18.5 1.7e-06 27.3 0.5 4.7 5 0 0 5 5 5 4 EF hand EF-hand_6 PF13405.6 CCF74481.1 - 3.2e-21 73.4 14.9 4.6e-06 26.1 0.8 5.0 5 0 0 5 5 4 4 EF-hand domain EF-hand_7 PF13499.6 CCF74481.1 - 9e-17 61.3 15.6 4.2e-08 33.5 4.2 3.9 3 2 1 4 4 4 3 EF-hand domain pair EF-hand_8 PF13833.6 CCF74481.1 - 1.7e-14 53.4 9.6 0.0058 16.5 0.1 4.5 3 1 1 4 4 4 4 EF-hand domain pair Pkinase_fungal PF17667.1 CCF74481.1 - 1.2e-06 27.6 0.0 1.7e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 CCF74481.1 - 5.9e-05 22.5 0.1 0.00016 21.1 0.1 1.8 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 CCF74481.1 - 0.00015 21.2 0.1 0.0014 18.0 0.0 2.4 2 1 0 2 2 2 1 Kinase-like SPARC_Ca_bdg PF10591.9 CCF74481.1 - 0.002 18.4 0.8 1.5 9.2 0.0 3.0 1 1 2 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region UPF0223 PF05256.12 CCF74481.1 - 0.0057 17.0 0.3 0.25 11.7 0.0 2.5 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0223) APH PF01636.23 CCF74481.1 - 0.036 14.0 0.1 0.095 12.6 0.0 1.6 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_4 PF12763.7 CCF74481.1 - 0.057 13.4 7.9 0.062 13.2 0.2 3.7 2 1 1 4 4 4 0 Cytoskeletal-regulatory complex EF hand YfmQ PF10787.9 CCF74481.1 - 0.07 12.9 0.5 0.14 11.9 0.5 1.5 1 0 0 1 1 1 0 Uncharacterised protein from bacillus cereus group TGT PF01702.18 CCF74482.1 - 2.1e-132 441.5 0.0 2.5e-132 441.3 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase WD40 PF00400.32 CCF74483.1 - 1.1e-25 89.4 2.6 1.9e-05 25.3 0.0 5.6 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF74483.1 - 7.9e-15 54.9 0.1 2.3e-06 27.8 0.2 4.4 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 CCF74483.1 - 7.9e-05 21.5 0.2 0.18 10.4 0.1 2.9 2 1 1 3 3 3 2 Nucleoporin Nup120/160 YmzC PF14157.6 CCF74483.1 - 0.0052 16.8 1.7 2.7 8.2 0.1 2.8 2 0 0 2 2 2 2 YmzC-like protein Cytochrom_D1 PF02239.16 CCF74483.1 - 0.061 11.9 0.0 0.19 10.2 0.1 1.7 1 1 1 2 2 2 0 Cytochrome D1 heme domain Ge1_WD40 PF16529.5 CCF74483.1 - 0.093 11.7 3.4 14 4.5 0.0 4.3 2 1 4 6 6 6 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Aminotran_5 PF00266.19 CCF74485.1 - 4.6e-95 318.7 0.0 5.5e-95 318.5 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 CCF74485.1 - 2.5e-07 29.6 0.1 3.8e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 CCF74485.1 - 9.4e-07 28.5 0.1 1.4e-06 27.9 0.1 1.1 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 CCF74485.1 - 0.0023 17.3 0.0 0.0033 16.7 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase DUF688 PF05097.12 CCF74486.1 - 0.031 13.5 0.2 0.035 13.3 0.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF688) EF1_GNE PF00736.19 CCF74487.1 - 2.2e-28 98.3 0.6 4.1e-28 97.4 0.6 1.5 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain NAD_kinase PF01513.21 CCF74488.1 - 1e-08 34.8 0.0 0.004 16.4 0.0 3.2 3 0 0 3 3 3 2 ATP-NAD kinase DAGK_cat PF00781.24 CCF74488.1 - 0.0042 16.7 0.0 0.01 15.5 0.0 1.6 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain CX9C PF16860.5 CCF74489.1 - 0.02 14.9 0.6 0.029 14.4 0.6 1.3 1 0 0 1 1 1 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 CCF74489.1 - 0.036 14.2 0.3 0.09 12.9 0.2 1.7 1 1 1 2 2 2 0 CHCH domain Arteri_env PF01606.16 CCF74489.1 - 0.081 12.8 0.1 0.1 12.5 0.1 1.1 1 0 0 1 1 1 0 Arterivirus envelope protein DEAD PF00270.29 CCF74490.1 - 9.6e-09 35.2 0.9 2.1e-08 34.1 0.1 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74490.1 - 4.9e-05 23.6 2.0 0.00011 22.5 0.1 2.5 2 2 0 2 2 2 1 Helicase conserved C-terminal domain DUF4837 PF16125.5 CCF74490.1 - 0.0094 15.0 0.1 1.4 7.9 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF4837) Mito_carr PF00153.27 CCF74491.1 - 2.7e-31 107.4 3.8 5.4e-16 58.3 0.1 3.3 3 0 0 3 3 3 3 Mitochondrial carrier protein Pro_isomerase PF00160.21 CCF74492.1 - 1.1e-42 146.0 0.0 1.4e-42 145.7 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Peptidase_M41 PF01434.18 CCF74493.1 - 3.1e-58 196.8 0.0 4.8e-58 196.2 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 CCF74493.1 - 9.1e-43 145.9 0.0 2.7e-42 144.3 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF74493.1 - 2.1e-14 53.1 0.3 1.8e-13 50.1 0.1 2.4 2 0 0 2 2 2 1 AAA+ lid domain AAA_5 PF07728.14 CCF74493.1 - 6.6e-07 29.4 0.1 4.4e-06 26.7 0.1 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 CCF74493.1 - 6e-06 26.1 0.0 2e-05 24.4 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CCF74493.1 - 1.2e-05 25.7 1.0 0.00046 20.6 0.1 2.6 2 1 1 3 3 2 1 AAA ATPase domain TIP49 PF06068.13 CCF74493.1 - 6.2e-05 22.4 0.0 0.00013 21.3 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_22 PF13401.6 CCF74493.1 - 0.00025 21.3 0.3 0.0082 16.4 0.3 2.6 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CCF74493.1 - 0.00054 20.1 0.0 0.0014 18.8 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_2 PF07724.14 CCF74493.1 - 0.0012 19.0 0.0 0.0049 17.0 0.0 2.0 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) IstB_IS21 PF01695.17 CCF74493.1 - 0.0014 18.4 0.0 0.0029 17.3 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Mg_chelatase PF01078.21 CCF74493.1 - 0.0017 17.7 0.0 0.0034 16.8 0.0 1.5 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI DUF815 PF05673.13 CCF74493.1 - 0.0032 16.7 0.0 0.021 14.0 0.0 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_28 PF13521.6 CCF74493.1 - 0.0034 17.6 0.2 0.01 16.1 0.0 1.9 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 CCF74493.1 - 0.0048 16.9 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 CCF74493.1 - 0.017 15.7 0.0 0.054 14.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 CCF74493.1 - 0.027 14.9 0.0 0.068 13.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CCF74493.1 - 0.03 13.8 0.1 0.082 12.4 0.1 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 CCF74493.1 - 0.036 14.0 0.2 0.11 12.4 0.1 1.9 2 0 0 2 2 2 0 NACHT domain Sigma54_activat PF00158.26 CCF74493.1 - 0.037 13.7 0.0 0.085 12.6 0.0 1.7 1 1 0 1 1 1 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 CCF74493.1 - 0.041 13.2 0.0 0.087 12.1 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin AAA_25 PF13481.6 CCF74493.1 - 0.07 12.7 0.0 0.17 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 CCF74493.1 - 0.078 13.0 0.0 0.23 11.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 CCF74493.1 - 0.092 12.5 0.6 0.52 10.0 0.3 2.3 1 1 1 2 2 2 0 AAA domain PhoH PF02562.16 CCF74493.1 - 0.1 12.1 0.1 0.19 11.2 0.1 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_24 PF13479.6 CCF74493.1 - 0.12 12.0 0.0 0.24 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF3139 PF11337.8 CCF74493.1 - 0.14 12.9 0.1 0.27 11.9 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3139) TniB PF05621.11 CCF74493.1 - 0.15 11.4 0.0 0.43 10.0 0.0 1.7 1 1 0 2 2 2 0 Bacterial TniB protein DNA_gyraseB PF00204.25 CCF74494.1 - 6.5e-47 159.2 0.7 1e-46 158.6 0.7 1.3 1 0 0 1 1 1 1 DNA gyrase B DNA_gyraseB_C PF00986.21 CCF74494.1 - 3.3e-25 88.0 0.3 1.5e-24 85.9 0.1 2.2 3 0 0 3 3 3 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.22 CCF74494.1 - 4.3e-18 65.4 0.0 6.6e-15 55.2 0.0 2.8 2 1 0 2 2 2 2 Toprim domain HATPase_c PF02518.26 CCF74494.1 - 1.7e-17 63.9 0.2 6.4e-17 62.1 0.1 2.0 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 CCF74494.1 - 1.2e-05 25.1 0.0 4.2e-05 23.4 0.0 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TBPIP PF07106.13 CCF74496.1 - 2.1e-16 59.6 0.0 2.4e-16 59.4 0.0 1.1 1 0 0 1 1 1 1 TBPIP/Hop2 winged helix domain PhoQ_Sensor PF08918.10 CCF74497.1 - 0.035 14.0 0.1 0.037 13.9 0.1 1.1 1 0 0 1 1 1 0 PhoQ Sensor Ribosomal_L1 PF00687.21 CCF74498.1 - 1.1e-19 71.0 0.2 2e-19 70.1 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family WD40 PF00400.32 CCF74498.1 - 1.7e-17 63.5 9.1 0.0065 17.3 0.1 7.0 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF74498.1 - 1.8e-08 34.5 0.5 0.16 12.3 0.0 4.6 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Dcc1 PF09724.9 CCF74498.1 - 0.023 14.0 0.0 5.8 6.1 0.0 2.2 2 0 0 2 2 2 0 Sister chromatid cohesion protein Dcc1 Polysacc_synt_2 PF02719.15 CCF74499.1 - 0.14 11.3 0.0 0.21 10.7 0.0 1.2 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein Nnf1 PF03980.14 CCF74501.1 - 0.013 15.8 0.0 0.028 14.8 0.0 1.4 1 0 0 1 1 1 0 Nnf1 DCAF15_WD40 PF14939.6 CCF74501.1 - 0.058 13.0 3.0 0.06 13.0 2.0 1.6 1 1 0 1 1 1 0 DDB1-and CUL4-substrate receptor 15, WD repeat Alba PF01918.21 CCF74502.1 - 0.00058 19.6 0.0 0.0015 18.3 0.0 1.7 1 1 0 1 1 1 1 Alba Rpp20 PF12328.8 CCF74502.1 - 0.0018 18.2 0.0 0.0075 16.2 0.0 2.1 1 1 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P SpoU_methylase PF00588.19 CCF74504.1 - 0.041 14.1 0.0 0.06 13.5 0.0 1.3 1 0 0 1 1 1 0 SpoU rRNA Methylase family Cpn60_TCP1 PF00118.24 CCF74505.1 - 6.5e-136 453.8 14.9 7.4e-136 453.6 14.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family HxlR PF01638.17 CCF74506.1 - 0.0019 18.0 0.1 0.042 13.7 0.1 2.5 2 0 0 2 2 2 1 HxlR-like helix-turn-helix SATase_N PF06426.14 CCF74506.1 - 0.02 15.3 0.1 0.18 12.2 0.0 2.1 2 0 0 2 2 2 0 Serine acetyltransferase, N-terminal Pec_lyase PF09492.10 CCF74507.1 - 0.11 11.8 0.0 0.14 11.4 0.0 1.2 1 0 0 1 1 1 0 Pectic acid lyase zf-C3HC4_3 PF13920.6 CCF74509.1 - 1.8e-10 40.5 20.6 2.3e-10 40.1 20.6 1.1 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF74509.1 - 0.00049 19.9 21.3 0.00071 19.4 21.3 1.2 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 CCF74509.1 - 0.035 14.4 23.6 0.047 14.0 23.6 1.2 1 0 0 1 1 1 0 Ring finger domain Macoilin PF09726.9 CCF74510.1 - 9.2 4.7 16.4 12 4.4 16.4 1.2 1 0 0 1 1 1 0 Macoilin family PqiA PF04403.13 CCF74511.1 - 0.0004 20.3 19.3 0.0024 17.7 4.3 2.9 3 1 0 3 3 3 2 Paraquat-inducible protein A DUF1422 PF07226.11 CCF74511.1 - 0.24 11.4 9.6 3.7 7.6 1.8 3.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1422) RCC1 PF00415.18 CCF74512.1 - 0.0031 18.1 0.0 0.01 16.4 0.0 1.9 2 0 0 2 2 2 1 Regulator of chromosome condensation (RCC1) repeat Myosin_head PF00063.21 CCF74513.1 - 1e-173 579.2 15.7 2.9e-173 577.7 15.7 1.7 1 1 0 1 1 1 1 Myosin head (motor domain) IQ PF00612.27 CCF74513.1 - 2.4e-17 61.0 26.3 0.0002 20.8 0.2 7.2 7 0 0 7 7 7 5 IQ calmodulin-binding motif AAA_16 PF13191.6 CCF74513.1 - 0.01 16.2 0.0 0.032 14.6 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain Myosin_N PF02736.19 CCF74513.1 - 0.011 15.5 0.0 0.071 13.0 0.0 2.2 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain DUF2075 PF09848.9 CCF74513.1 - 0.061 12.5 0.2 0.15 11.3 0.0 1.7 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_22 PF13401.6 CCF74513.1 - 0.078 13.3 0.0 0.34 11.2 0.0 2.1 1 0 0 1 1 1 0 AAA domain CbiA PF01656.23 CCF74513.1 - 0.15 12.1 0.1 0.75 9.9 0.0 2.3 2 0 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain Pkinase PF00069.25 CCF74516.1 - 1.7e-13 50.6 0.0 3.3e-09 36.5 0.0 2.3 2 0 0 2 2 2 2 Protein kinase domain ArfGap PF01412.18 CCF74517.1 - 1.7e-30 105.4 0.5 2.3e-29 101.8 0.0 2.4 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf Pro_isomerase PF00160.21 CCF74518.1 - 4e-42 144.2 0.1 4.6e-42 144.0 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PseudoU_synth_1 PF01416.20 CCF74519.1 - 2.2e-19 69.9 0.0 5.2e-17 62.3 0.0 2.5 2 0 0 2 2 2 2 tRNA pseudouridine synthase Pkinase PF00069.25 CCF74520.1 - 3.6e-34 118.3 0.0 5.7e-34 117.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74520.1 - 5.9e-20 71.6 0.1 1.3e-19 70.5 0.0 1.5 2 0 0 2 2 2 1 Protein tyrosine kinase Kdo PF06293.14 CCF74520.1 - 0.005 16.2 0.0 0.0083 15.5 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family HTH_psq PF05225.16 CCF74520.1 - 0.16 11.7 0.0 0.31 10.8 0.0 1.4 1 0 0 1 1 1 0 helix-turn-helix, Psq domain ATP_bind_1 PF03029.17 CCF74521.1 - 1.1e-61 208.6 0.2 2.6e-58 197.7 0.3 2.1 1 1 1 2 2 2 2 Conserved hypothetical ATP binding protein Pox_A32 PF04665.12 CCF74521.1 - 5.1e-05 22.8 0.1 0.00019 21.0 0.0 2.0 2 0 0 2 2 2 1 Poxvirus A32 protein AAA_30 PF13604.6 CCF74521.1 - 0.00011 22.0 0.0 0.00017 21.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain MMR_HSR1 PF01926.23 CCF74521.1 - 0.00024 21.2 0.0 0.00065 19.8 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase MeaB PF03308.16 CCF74521.1 - 0.00034 19.7 0.0 0.00051 19.1 0.0 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_31 PF13614.6 CCF74521.1 - 0.00047 20.1 0.8 0.032 14.1 0.7 2.4 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 CCF74521.1 - 0.00074 19.2 0.3 0.024 14.3 0.1 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain MipZ PF09140.11 CCF74521.1 - 0.00077 18.8 0.0 0.0013 18.1 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ AAA_16 PF13191.6 CCF74521.1 - 0.0015 18.9 0.0 0.0023 18.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 CCF74521.1 - 0.0017 17.6 0.1 0.0032 16.7 0.1 1.5 1 0 0 1 1 1 1 NB-ARC domain AAA_14 PF13173.6 CCF74521.1 - 0.0033 17.4 0.0 0.0076 16.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 CCF74521.1 - 0.0038 17.0 0.1 0.0058 16.4 0.1 1.3 1 0 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 CCF74521.1 - 0.0052 16.1 0.0 0.0081 15.5 0.0 1.2 1 0 0 1 1 1 1 Zeta toxin MobB PF03205.14 CCF74521.1 - 0.0084 16.0 0.3 0.02 14.8 0.3 1.8 1 1 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 CCF74521.1 - 0.0091 15.6 3.3 0.65 9.6 0.2 3.0 3 0 0 3 3 3 1 CobW/HypB/UreG, nucleotide-binding domain CbiA PF01656.23 CCF74521.1 - 0.011 15.8 0.0 0.011 15.7 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain T2SSE PF00437.20 CCF74521.1 - 0.013 14.6 0.0 0.022 13.9 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_22 PF13401.6 CCF74521.1 - 0.014 15.7 0.0 0.027 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 CCF74521.1 - 0.018 15.0 0.0 0.034 14.1 0.0 1.4 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea DUF87 PF01935.17 CCF74521.1 - 0.019 15.0 0.3 0.038 14.1 0.3 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain APS_kinase PF01583.20 CCF74521.1 - 0.02 14.8 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_19 PF13245.6 CCF74521.1 - 0.021 15.2 0.1 0.04 14.3 0.1 1.4 1 0 0 1 1 1 0 AAA domain Torsin PF06309.11 CCF74521.1 - 0.025 14.7 0.3 0.092 12.8 0.0 2.0 2 0 0 2 2 2 0 Torsin NACHT PF05729.12 CCF74521.1 - 0.026 14.4 0.1 0.045 13.7 0.1 1.3 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 CCF74521.1 - 0.03 14.7 0.3 0.11 12.9 0.0 2.1 2 0 0 2 2 1 0 RNA helicase AAA_18 PF13238.6 CCF74521.1 - 0.034 14.7 0.0 0.054 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain FeoB_N PF02421.18 CCF74521.1 - 0.035 13.6 1.0 4 7.0 0.0 3.0 3 0 0 3 3 3 0 Ferrous iron transport protein B AAA_33 PF13671.6 CCF74521.1 - 0.042 14.0 0.0 0.072 13.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CCF74521.1 - 0.049 14.1 0.0 0.082 13.4 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_7 PF12775.7 CCF74521.1 - 0.051 13.1 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 CCF74521.1 - 0.051 13.6 0.0 0.41 10.7 0.0 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLP1_P PF16575.5 CCF74521.1 - 0.052 13.3 0.1 0.16 11.8 0.0 2.0 2 1 0 2 2 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_29 PF13555.6 CCF74521.1 - 0.055 13.2 0.3 0.21 11.3 0.1 2.0 2 0 0 2 2 2 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 CCF74521.1 - 0.055 13.2 0.0 0.11 12.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase SRPRB PF09439.10 CCF74521.1 - 0.067 12.6 0.1 5.4 6.4 0.0 2.5 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit PRK PF00485.18 CCF74521.1 - 0.081 12.7 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family KTI12 PF08433.10 CCF74521.1 - 0.092 12.2 0.0 0.16 11.4 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 IstB_IS21 PF01695.17 CCF74521.1 - 0.1 12.3 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 CCF74521.1 - 0.14 11.5 0.0 0.23 10.8 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA PF00004.29 CCF74521.1 - 0.14 12.6 0.0 0.28 11.6 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Dynamin_N PF00350.23 CCF74521.1 - 0.19 11.8 0.3 2.6 8.1 0.3 2.3 1 1 0 1 1 1 0 Dynamin family Vps16_N PF04841.13 CCF74522.1 - 3.9e-05 22.6 0.1 0.041 12.6 0.1 2.3 2 0 0 2 2 2 2 Vps16, N-terminal region Htr2 PF17909.1 CCF74522.1 - 0.03 14.6 0.4 0.063 13.6 0.4 1.4 1 0 0 1 1 1 0 Htr2 transmembrane domain AP2 PF00847.20 CCF74523.1 - 6.4e-26 90.3 13.1 2.6e-12 46.8 5.0 3.4 3 0 0 3 3 3 3 AP2 domain LptF_LptG PF03739.14 CCF74523.1 - 6e-05 22.0 0.2 8.2e-05 21.6 0.2 1.2 1 0 0 1 1 1 1 Lipopolysaccharide export system permease LptF/LptG Ribosomal_L23 PF00276.20 CCF74524.1 - 6.7e-12 45.6 0.1 1.6e-11 44.4 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L23 PLDc_2 PF13091.6 CCF74526.1 - 1.3e-12 47.7 0.0 5.2e-05 23.2 0.0 2.3 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 CCF74526.1 - 0.00062 19.8 4.5 0.093 12.9 0.0 3.6 3 1 0 3 3 3 2 Phospholipase D Active site motif CNP_C_terminal PF17839.1 CCF74526.1 - 0.037 14.8 0.3 0.095 13.5 0.3 1.6 1 0 0 1 1 1 0 C-terminal domain of cyclic nucleotide phosphodiesterase DUF4665 PF15679.5 CCF74526.1 - 0.052 14.2 0.0 0.62 10.7 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) zf-AD PF07776.15 CCF74526.1 - 0.31 11.3 2.2 15 5.9 0.0 3.4 3 0 0 3 3 3 0 Zinc-finger associated domain (zf-AD) SNF2_N PF00176.23 CCF74527.1 - 1.5e-63 214.7 0.3 1.5e-63 214.7 0.3 2.5 3 0 0 3 3 3 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF74527.1 - 1.1e-17 64.3 0.0 4.9e-17 62.3 0.0 2.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF74527.1 - 4e-05 23.5 0.0 0.00057 19.7 0.0 2.8 3 1 0 3 3 3 1 DEAD/DEAH box helicase HSA PF07529.13 CCF74527.1 - 0.00057 20.1 0.1 0.0032 17.7 0.1 2.3 1 0 0 1 1 1 1 HSA OMPdecase PF00215.24 CCF74528.1 - 3.1e-26 92.4 0.0 4e-26 92.0 0.0 1.2 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family TPR_1 PF00515.28 CCF74530.1 - 8.9e-12 44.3 4.8 1.9e-05 24.2 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 CCF74530.1 - 1.7e-11 43.3 2.0 6e-05 22.9 0.0 3.3 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_19 PF14559.6 CCF74530.1 - 1.4e-09 38.4 0.0 1e-08 35.6 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 CCF74530.1 - 1.7e-08 34.1 4.6 3e-05 23.9 0.1 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 CCF74530.1 - 1.1e-05 25.5 1.3 0.0041 17.4 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF74530.1 - 2.7e-05 24.4 0.4 0.009 16.3 0.0 2.9 2 2 0 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 CCF74530.1 - 0.00016 21.7 1.4 0.084 13.0 0.0 3.0 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_11 PF13414.6 CCF74530.1 - 0.00017 21.2 2.0 3.9 7.2 0.1 3.4 2 1 1 3 3 3 3 TPR repeat TPR_16 PF13432.6 CCF74530.1 - 0.0018 18.9 0.0 0.097 13.3 0.0 2.2 2 0 0 2 2 2 1 Tetratricopeptide repeat SRP_TPR_like PF17004.5 CCF74530.1 - 0.0029 17.6 0.8 0.011 15.7 0.1 2.0 2 0 0 2 2 2 1 Putative TPR-like repeat TPR_7 PF13176.6 CCF74530.1 - 0.0048 16.8 0.0 6.1 7.1 0.0 3.1 3 0 0 3 3 3 1 Tetratricopeptide repeat NARP1 PF12569.8 CCF74530.1 - 0.01 14.8 2.2 0.012 14.5 0.2 1.8 2 0 0 2 2 2 0 NMDA receptor-regulated protein 1 TPR_14 PF13428.6 CCF74530.1 - 0.023 15.5 0.0 0.2 12.6 0.0 2.5 2 2 1 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 CCF74530.1 - 0.025 15.2 0.6 0.34 11.6 0.0 2.9 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_9 PF13371.6 CCF74530.1 - 0.053 13.7 0.0 0.088 13.0 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF74530.1 - 0.096 12.9 2.4 0.39 11.0 0.2 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 YozE_SAM_like PF06855.12 CCF74530.1 - 0.13 12.5 0.9 3.5 7.9 0.0 2.6 2 1 0 2 2 2 0 YozE SAM-like fold ubiquitin PF00240.23 CCF74531.1 - 2.5e-14 52.8 0.1 4.3e-14 52.0 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 CCF74531.1 - 0.0002 21.1 0.1 0.00041 20.1 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 CCF74531.1 - 0.00079 20.0 0.6 0.002 18.6 0.1 1.9 2 0 0 2 2 2 1 DUF2407 ubiquitin-like domain UBA PF00627.31 CCF74531.1 - 0.0024 17.7 0.1 0.0053 16.6 0.1 1.6 1 0 0 1 1 1 1 UBA/TS-N domain CUE PF02845.16 CCF74531.1 - 0.046 13.4 2.6 0.079 12.7 0.3 2.6 2 0 0 2 2 2 0 CUE domain Rad60-SLD_2 PF13881.6 CCF74531.1 - 0.12 12.5 0.1 0.34 11.0 0.0 1.8 2 0 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like STI1 PF17830.1 CCF74531.1 - 2.1 8.3 26.6 0.27 11.2 3.1 4.1 1 1 2 3 3 3 0 STI1 domain UAA PF08449.11 CCF74532.1 - 2.2e-38 132.2 30.3 2.8e-38 131.8 30.3 1.1 1 0 0 1 1 1 1 UAA transporter family EamA PF00892.20 CCF74532.1 - 0.00037 20.7 29.6 0.00051 20.2 12.9 3.2 4 0 0 4 4 4 2 EamA-like transporter family DUF5308 PF17233.2 CCF74532.1 - 0.15 12.3 0.0 0.22 11.7 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5308) UFD1 PF03152.14 CCF74533.1 - 2.2e-26 92.4 0.0 3.2e-26 91.8 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 Thioredoxin PF00085.20 CCF74534.1 - 3.5e-13 49.4 0.0 6.7e-13 48.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin DSPc PF00782.20 CCF74534.1 - 7.8e-10 38.7 0.0 1.3e-09 37.9 0.0 1.4 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 CCF74534.1 - 0.00058 19.5 0.0 0.00089 18.9 0.0 1.4 1 0 0 1 1 1 1 Protein-tyrosine phosphatase Thioredoxin_9 PF14595.6 CCF74534.1 - 0.0015 18.3 0.0 0.0046 16.7 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CCF74534.1 - 0.0068 16.9 0.0 0.037 14.5 0.0 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Glutaredoxin PF00462.24 CCF74534.1 - 0.0071 16.5 0.0 0.016 15.4 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_8 PF13905.6 CCF74534.1 - 0.01 16.1 0.0 0.035 14.4 0.0 1.9 1 1 0 1 1 1 0 Thioredoxin-like PTPlike_phytase PF14566.6 CCF74534.1 - 0.012 15.7 0.0 0.11 12.6 0.0 2.0 1 1 1 2 2 2 0 Inositol hexakisphosphate OST3_OST6 PF04756.13 CCF74534.1 - 0.015 14.6 0.0 0.025 14.0 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family Redoxin PF08534.10 CCF74534.1 - 0.039 13.7 0.0 0.092 12.5 0.0 1.6 2 0 0 2 2 2 0 Redoxin Thioredoxin_7 PF13899.6 CCF74534.1 - 0.064 13.5 0.0 0.13 12.5 0.0 1.5 1 0 0 1 1 1 0 Thioredoxin-like AhpC-TSA PF00578.21 CCF74534.1 - 0.11 12.4 0.0 0.2 11.6 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA family TraF PF13728.6 CCF74534.1 - 0.13 12.1 0.0 0.27 11.0 0.0 1.4 1 0 0 1 1 1 0 F plasmid transfer operon protein GPI2 PF06432.11 CCF74536.1 - 3.9e-09 36.4 1.5 4.8e-09 36.1 1.5 1.2 1 0 0 1 1 1 1 Phosphatidylinositol N-acetylglucosaminyltransferase Aa_trans PF01490.18 CCF74537.1 - 0.059 12.1 0.4 0.066 11.9 0.4 1.0 1 0 0 1 1 1 0 Transmembrane amino acid transporter protein HSDR_N_2 PF13588.6 CCF74538.1 - 0.016 15.2 0.1 0.024 14.6 0.1 1.3 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) GT-D PF08759.11 CCF74539.1 - 0.095 12.4 1.3 0.16 11.6 1.3 1.5 1 0 0 1 1 1 0 Glycosyltransferase GT-D fold Helicase_C PF00271.31 CCF74540.1 - 9e-15 55.0 0.1 1.2e-13 51.4 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF74540.1 - 9.8e-11 41.7 0.0 2.1e-10 40.7 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Sar8_2 PF03058.14 CCF74540.1 - 0.18 12.4 0.6 0.66 10.5 0.1 2.2 2 0 0 2 2 2 0 Sar8.2 family Acylphosphatase PF00708.18 CCF74541.1 - 2.5e-20 72.6 0.2 2.8e-20 72.5 0.2 1.0 1 0 0 1 1 1 1 Acylphosphatase mRNA_cap_enzyme PF01331.19 CCF74542.1 - 0.072 12.9 0.0 0.18 11.6 0.0 1.7 1 1 0 1 1 1 0 mRNA capping enzyme, catalytic domain Syja_N PF02383.18 CCF74543.1 - 1.7e-51 175.5 0.0 2.6e-51 174.8 0.0 1.3 1 0 0 1 1 1 1 SacI homology domain Exo_endo_phos PF03372.23 CCF74543.1 - 3e-10 40.0 0.1 5.4e-10 39.2 0.1 1.5 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Peptidase_M18 PF02127.15 CCF74544.1 - 4e-111 371.9 0.0 5.5e-111 371.4 0.0 1.1 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 CCF74544.1 - 6.5e-05 22.1 0.0 0.052 12.6 0.0 2.1 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase SAP18 PF06487.12 CCF74545.1 - 0.0043 17.2 0.0 0.0092 16.2 0.0 1.6 1 0 0 1 1 1 1 Sin3 associated polypeptide p18 (SAP18) Use1 PF09753.9 CCF74546.1 - 0.00036 20.3 10.3 0.00041 20.2 9.5 1.4 1 1 0 1 1 1 1 Membrane fusion protein Use1 CHASE3 PF05227.13 CCF74546.1 - 0.029 14.3 1.2 0.038 13.9 0.5 1.5 1 1 0 1 1 1 0 CHASE3 domain DUF2207 PF09972.9 CCF74546.1 - 0.12 11.1 6.5 0.98 8.1 0.1 2.0 1 1 0 2 2 2 0 Predicted membrane protein (DUF2207) KIAA1430 PF13879.6 CCF74546.1 - 0.18 12.6 7.2 0.37 11.6 7.2 1.5 1 1 0 1 1 1 0 KIAA1430 homologue Pox_EPC_I2-L1 PF12575.8 CCF74546.1 - 0.27 11.5 3.1 4.4 7.6 0.4 2.4 2 0 0 2 2 2 0 Poxvirus entry protein complex L1 and I2 Pox_J1 PF03338.15 CCF74547.1 - 0.009 15.9 0.4 0.01 15.7 0.4 1.1 1 0 0 1 1 1 1 Poxvirus J1 protein Tox-HNH-HHH PF15637.6 CCF74548.1 - 0.055 13.6 0.3 9.2 6.5 0.1 2.6 2 0 0 2 2 2 0 HNH/Endo VII superfamily nuclease toxin with a HHH motif Acetyltransf_1 PF00583.25 CCF74549.1 - 0.0091 16.2 0.1 0.45 10.8 0.0 3.1 2 1 0 2 2 2 1 Acetyltransferase (GNAT) family Melittin PF01372.17 CCF74554.1 - 0.08 12.9 0.1 0.13 12.2 0.1 1.4 1 0 0 1 1 1 0 Melittin DUF365 PF04033.12 CCF74555.1 - 0.13 12.5 0.2 0.71 10.2 0.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF365) Exo84_C PF16528.5 CCF74558.1 - 0.00025 21.0 0.4 0.00025 21.0 0.4 2.6 3 1 0 3 3 3 1 Exocyst component 84 C-terminal CPBP PF02517.16 CCF74559.1 - 2.4e-12 47.0 1.9 2.4e-12 47.0 1.9 2.5 3 1 1 4 4 4 1 CPBP intramembrane metalloprotease Cystatin PF00031.21 CCF74559.1 - 0.063 13.6 0.0 0.17 12.1 0.0 1.7 1 0 0 1 1 1 0 Cystatin domain MAPKK1_Int PF08923.10 CCF74559.1 - 0.31 10.9 3.8 0.82 9.5 0.7 2.6 3 0 0 3 3 3 0 Mitogen-activated protein kinase kinase 1 interacting ATP1G1_PLM_MAT8 PF02038.16 CCF74559.1 - 0.61 9.6 2.3 0.6 9.6 0.2 2.2 2 0 0 2 2 2 0 ATP1G1/PLM/MAT8 family KH_1 PF00013.29 CCF74560.1 - 0.03 14.2 0.0 0.083 12.7 0.0 1.7 1 0 0 1 1 1 0 KH domain Ras PF00071.22 CCF74561.1 - 7.1e-63 211.0 2.9 9e-63 210.7 2.5 1.3 1 1 0 1 1 1 1 Ras family Roc PF08477.13 CCF74561.1 - 9.1e-37 125.9 0.8 9.1e-37 125.9 0.8 1.8 2 1 1 3 3 3 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF74561.1 - 2.6e-18 66.1 0.3 3.6e-18 65.6 0.3 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 CCF74561.1 - 1.1e-06 28.7 0.2 1.9e-06 27.9 0.2 1.4 1 1 0 1 1 1 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF74561.1 - 9.1e-06 25.2 0.9 1.5e-05 24.5 0.9 1.4 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 CCF74561.1 - 4.2e-05 23.1 0.6 6e-05 22.6 0.6 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 CCF74561.1 - 0.0003 20.7 3.6 0.082 12.8 0.2 2.4 1 1 0 2 2 2 2 RsgA GTPase GTP_EFTU PF00009.27 CCF74561.1 - 0.00053 19.6 1.2 0.0028 17.2 0.8 1.9 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_24 PF13479.6 CCF74561.1 - 0.015 15.0 0.2 0.024 14.3 0.2 1.5 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CCF74561.1 - 0.016 15.6 0.0 0.021 15.2 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 CCF74561.1 - 0.018 14.8 0.0 0.044 13.5 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_5 PF07728.14 CCF74561.1 - 0.054 13.5 0.0 0.19 11.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CCF74561.1 - 0.11 12.8 0.0 0.21 11.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CCF74561.1 - 0.28 11.7 1.4 0.59 10.7 1.4 1.8 1 1 0 1 1 1 0 ABC transporter Glycolytic PF00274.19 CCF74562.1 - 8e-149 495.1 0.0 8.9e-149 495.0 0.0 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I W2 PF02020.18 CCF74562.1 - 0.13 12.4 0.0 2.3 8.4 0.0 2.8 3 0 0 3 3 3 0 eIF4-gamma/eIF5/eIF2-epsilon WD40 PF00400.32 CCF74563.1 - 1.6e-23 82.5 13.4 0.00027 21.6 0.1 8.8 8 0 0 8 8 8 7 WD domain, G-beta repeat Utp13 PF08625.11 CCF74563.1 - 2.6e-10 40.4 0.1 5.6e-10 39.3 0.1 1.5 1 0 0 1 1 1 1 Utp13 specific WD40 associated domain ANAPC4_WD40 PF12894.7 CCF74563.1 - 2.3e-05 24.6 2.2 1.4 9.3 0.1 5.6 3 1 3 6 6 6 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF74564.1 - 7.4e-12 45.6 7.9 0.00029 21.5 0.1 5.1 5 0 0 5 5 5 3 WD domain, G-beta repeat NUP214 PF16755.5 CCF74564.1 - 0.00099 18.4 0.0 0.0013 18.0 0.0 1.1 1 0 0 1 1 1 1 Nucleoporin or Nuclear pore complex subunit NUP214=Nup159 PQQ_2 PF13360.6 CCF74564.1 - 0.0018 17.9 0.2 0.098 12.2 0.1 2.8 2 2 0 2 2 2 1 PQQ-like domain CPSF_A PF03178.15 CCF74564.1 - 0.018 14.4 0.1 4.7 6.4 0.0 2.3 1 1 1 2 2 2 0 CPSF A subunit region Snf7 PF03357.21 CCF74565.1 - 9.3e-05 22.1 11.6 0.00012 21.8 11.6 1.1 1 0 0 1 1 1 1 Snf7 GatB_Yqey PF02637.18 CCF74565.1 - 0.023 14.6 9.5 0.21 11.5 1.9 2.1 1 1 1 2 2 2 0 GatB domain BRICHOS PF04089.14 CCF74565.1 - 0.04 14.1 2.2 0.085 13.1 0.3 2.2 1 1 1 2 2 2 0 BRICHOS domain Citrate_synt PF00285.21 CCF74566.1 - 4.3e-76 256.3 0.0 5.8e-76 255.9 0.0 1.2 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain DNA_Packaging_2 PF11123.8 CCF74566.1 - 0.025 14.8 0.0 0.076 13.2 0.0 1.8 1 0 0 1 1 1 0 DNA packaging protein GcpE PF04551.14 CCF74567.1 - 3.3e-147 490.2 0.0 6.6e-147 489.2 0.0 1.5 1 1 0 1 1 1 1 GcpE protein BKACE PF05853.12 CCF74567.1 - 0.017 14.4 0.0 0.11 11.7 0.0 2.1 2 0 0 2 2 2 0 beta-keto acid cleavage enzyme zf-CDGSH PF09360.10 CCF74568.1 - 4.2e-16 58.9 4.3 6.1e-10 39.2 0.3 2.2 2 0 0 2 2 2 2 Iron-binding zinc finger CDGSH type Acyltransferase PF01553.21 CCF74569.1 - 3.6e-14 52.5 0.0 5.9e-14 51.8 0.0 1.3 1 0 0 1 1 1 1 Acyltransferase DAGAT PF03982.13 CCF74569.1 - 0.018 13.9 0.0 0.063 12.2 0.0 1.7 1 1 0 2 2 2 0 Diacylglycerol acyltransferase LIN52 PF10044.9 CCF74569.1 - 0.04 14.6 0.0 0.069 13.9 0.0 1.3 1 0 0 1 1 1 0 Retinal tissue protein VPS9 PF02204.18 CCF74570.1 - 7.6e-27 93.6 0.5 1.4e-26 92.7 0.5 1.5 1 0 0 1 1 1 1 Vacuolar sorting protein 9 (VPS9) domain CAF1C_H4-bd PF12265.8 CCF74571.1 - 9.7e-15 54.6 0.6 3.9e-14 52.6 0.2 2.3 2 0 0 2 2 2 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex WD40 PF00400.32 CCF74571.1 - 1.3e-10 41.6 12.2 0.0056 17.5 0.6 5.4 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF74571.1 - 1.9e-05 24.9 0.2 0.0093 16.3 0.0 3.0 2 1 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain Itfg2 PF15907.5 CCF74571.1 - 0.0032 16.6 0.0 0.16 11.0 0.0 2.1 2 0 0 2 2 2 2 Integrin-alpha FG-GAP repeat-containing protein 2 Nup160 PF11715.8 CCF74571.1 - 0.1 11.3 0.0 1.3 7.6 0.0 2.1 2 0 0 2 2 2 0 Nucleoporin Nup120/160 WD40 PF00400.32 CCF74572.1 - 0.14 13.1 3.6 2.7 9.0 0.4 4.1 4 1 0 4 4 4 0 WD domain, G-beta repeat PhaC_N PF07167.13 CCF74573.1 - 0.15 11.7 0.0 0.35 10.5 0.0 1.5 1 0 0 1 1 1 0 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CAF1 PF04857.20 CCF74575.1 - 3.3e-71 240.1 0.6 4.3e-71 239.7 0.6 1.1 1 0 0 1 1 1 1 CAF1 family ribonuclease RNA_bind PF08675.11 CCF74575.1 - 3.4e-09 36.6 0.5 8.5e-09 35.3 0.5 1.7 1 0 0 1 1 1 1 RNA binding domain RNase_T PF00929.24 CCF74575.1 - 0.11 13.0 0.1 59 4.2 0.0 3.6 3 1 1 4 4 4 0 Exonuclease DFRP_C PF16543.5 CCF74576.1 - 7.2e-07 29.6 0.0 7.2e-07 29.6 0.0 3.3 2 1 2 4 4 4 1 DRG Family Regulatory Proteins, Tma46 Herpes_ICP4_N PF03584.15 CCF74576.1 - 0.16 11.8 0.0 0.26 11.1 0.0 1.2 1 0 0 1 1 1 0 Herpesvirus ICP4-like protein N-terminal region HPIH PF13323.6 CCF74576.1 - 0.46 10.3 4.3 0.72 9.7 3.7 1.6 1 1 0 1 1 1 0 N-terminal domain with HPIH motif GIDA_assoc PF13932.6 CCF74576.1 - 0.52 10.5 8.5 0.74 10.0 8.5 1.2 1 0 0 1 1 1 0 GidA associated domain Ribosomal_60s PF00428.19 CCF74576.1 - 1 10.0 4.6 1.3 9.7 3.0 2.0 1 1 1 2 2 2 0 60s Acidic ribosomal protein ACR_tran PF00873.19 CCF74576.1 - 1.7 6.2 4.3 2.2 5.8 4.3 1.1 1 0 0 1 1 1 0 AcrB/AcrD/AcrF family eIF-5_eIF-2B PF01873.17 CCF74577.1 - 1.5e-36 124.8 0.1 2.3e-36 124.2 0.1 1.2 1 0 0 1 1 1 1 Domain found in IF2B/IF5 zinc_ribbon_6 PF14599.6 CCF74577.1 - 0.1 12.6 1.1 9.4 6.3 0.2 2.4 2 0 0 2 2 2 0 Zinc-ribbon DUF1201 PF06716.11 CCF74578.1 - 0.049 13.7 0.6 0.081 13.0 0.6 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1201) CcmD PF04995.14 CCF74578.1 - 0.18 11.9 0.2 0.3 11.2 0.2 1.4 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) Ribosomal_L28 PF00830.19 CCF74579.1 - 3e-12 46.5 1.4 7.9e-12 45.2 1.4 1.7 1 0 0 1 1 1 1 Ribosomal L28 family DUF1729 PF08354.10 CCF74579.1 - 0.034 13.1 0.0 0.041 12.8 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1729) GHMP_kinases_N PF00288.26 CCF74580.1 - 0.00022 21.4 0.1 0.00054 20.1 0.1 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 CCF74580.1 - 0.00027 21.2 0.0 0.00099 19.4 0.0 1.9 1 0 0 1 1 1 1 GHMP kinases C terminal PPR_3 PF13812.6 CCF74581.1 - 0.0027 17.7 0.3 0.018 15.1 0.1 2.3 2 0 0 2 2 2 1 Pentatricopeptide repeat domain AAA_22 PF13401.6 CCF74582.1 - 8.8e-08 32.5 0.0 1.8e-07 31.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 CCF74582.1 - 1.5e-07 31.6 0.9 6.8e-07 29.4 0.0 2.3 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea AAA_16 PF13191.6 CCF74582.1 - 5.4e-06 26.9 0.0 1.8e-05 25.2 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 CCF74582.1 - 0.00026 21.4 0.0 0.00071 20.0 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ResIII PF04851.15 CCF74582.1 - 0.006 16.6 0.0 0.071 13.1 0.0 2.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit Sigma54_activat PF00158.26 CCF74582.1 - 0.008 15.9 0.0 0.018 14.8 0.0 1.6 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_14 PF13173.6 CCF74582.1 - 0.025 14.6 0.1 0.16 12.0 0.1 2.2 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CCF74582.1 - 0.039 13.5 0.0 0.075 12.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region T2SSE PF00437.20 CCF74582.1 - 0.048 12.7 0.0 0.091 11.8 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 CCF74582.1 - 0.077 12.9 0.0 0.36 10.7 0.0 2.0 1 1 0 1 1 1 0 NACHT domain CPL PF08144.11 CCF74583.1 - 1.9e-07 31.5 5.2 0.014 15.7 0.1 4.8 3 1 2 5 5 5 3 CPL (NUC119) domain PUF PF00806.19 CCF74583.1 - 8.4e-05 22.0 3.2 0.015 14.9 0.1 5.2 5 0 0 5 5 5 1 Pumilio-family RNA binding repeat DUF4442 PF14539.6 CCF74584.1 - 0.089 12.9 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4442) LTP_2 PF14368.6 CCF74585.1 - 0.25 11.4 3.2 0.13 12.4 0.7 1.8 2 0 0 2 2 2 0 Probable lipid transfer TatD_DNase PF01026.21 CCF74586.1 - 3.2e-37 128.3 0.0 4.6e-37 127.8 0.0 1.2 1 0 0 1 1 1 1 TatD related DNase UPF0203 PF05254.12 CCF74586.1 - 0.65 10.3 8.4 0.073 13.3 2.4 2.5 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0203) Vac14_Fig4_bd PF11916.8 CCF74589.1 - 1.7e-36 125.6 8.0 1.7e-36 125.6 8.0 2.4 3 0 0 3 3 3 1 Vacuolar protein 14 C-terminal Fig4p binding Vac14_Fab1_bd PF12755.7 CCF74589.1 - 2.9e-36 124.0 5.4 1.1e-32 112.4 0.9 4.4 4 0 0 4 4 4 2 Vacuolar 14 Fab1-binding region CLASP_N PF12348.8 CCF74589.1 - 2.3e-11 43.7 3.3 9.1e-07 28.7 0.4 3.7 2 1 1 3 3 3 2 CLASP N terminal HEAT PF02985.22 CCF74589.1 - 1.2e-07 31.3 3.2 0.0005 20.1 0.0 4.5 5 0 0 5 5 5 2 HEAT repeat Cnd1 PF12717.7 CCF74589.1 - 3.6e-07 30.4 6.1 0.096 12.7 0.6 4.2 2 1 1 3 3 3 3 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 CCF74589.1 - 3.5e-06 27.4 0.0 0.0059 17.1 0.0 3.3 3 0 0 3 3 3 2 HEAT-like repeat HEAT_2 PF13646.6 CCF74589.1 - 0.0014 19.0 0.0 0.24 11.8 0.0 3.0 2 0 0 2 2 2 1 HEAT repeats RTP1_C1 PF10363.9 CCF74589.1 - 1.2 9.3 7.0 0.71 10.1 0.1 3.8 4 1 0 4 4 4 0 Required for nuclear transport of RNA pol II C-terminus 1 ThiF PF00899.21 CCF74590.1 - 3.9e-88 294.9 0.0 2.8e-60 203.7 0.0 2.2 2 0 0 2 2 2 2 ThiF family UBA_e1_thiolCys PF10585.9 CCF74590.1 - 1.6e-59 201.9 0.7 2.6e-59 201.2 0.7 1.3 1 0 0 1 1 1 1 Ubiquitin-activating enzyme active site E1_FCCH PF16190.5 CCF74590.1 - 3.3e-16 59.2 0.3 7.3e-16 58.1 0.3 1.6 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 FCCH domain E1_UFD PF09358.10 CCF74590.1 - 3.2e-15 56.6 0.1 7.8e-15 55.3 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin fold domain E1_4HB PF16191.5 CCF74590.1 - 1.6e-05 25.0 0.0 4e-05 23.7 0.0 1.7 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 four-helix bundle DUF3557 PF12078.8 CCF74590.1 - 0.033 14.2 2.1 0.7 9.8 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF3557) Cuticle_1 PF08140.11 CCF74590.1 - 0.12 12.4 0.4 0.56 10.3 0.1 2.2 2 0 0 2 2 2 0 Crustacean cuticle protein repeat Sec23_trunk PF04811.15 CCF74591.1 - 1.1e-57 195.4 0.0 2.4e-57 194.3 0.0 1.5 2 0 0 2 2 2 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 CCF74591.1 - 8.7e-30 103.3 0.1 1.8e-29 102.3 0.1 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain Sec23_helical PF04815.15 CCF74591.1 - 9.9e-23 79.9 0.1 1.9e-22 79.0 0.1 1.5 1 0 0 1 1 1 1 Sec23/Sec24 helical domain zf-Sec23_Sec24 PF04810.15 CCF74591.1 - 1.4e-12 47.4 0.7 3.5e-12 46.1 0.7 1.8 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Gelsolin PF00626.22 CCF74591.1 - 2.6e-08 33.7 0.0 1.4e-07 31.3 0.0 2.2 1 1 0 1 1 1 1 Gelsolin repeat LSM PF01423.22 CCF74592.1 - 5.1e-15 54.9 0.5 6.1e-15 54.7 0.5 1.1 1 0 0 1 1 1 1 LSM domain PCIF1_WW PF12237.8 CCF74593.1 - 1.8e-32 112.4 0.2 3e-32 111.6 0.2 1.3 1 0 0 1 1 1 1 Phosphorylated CTD interacting factor 1 WW domain UPF0121 PF03661.13 CCF74594.1 - 1.9e-08 34.0 8.5 2.3e-08 33.7 8.5 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) STIL_N PF15253.6 CCF74594.1 - 0.00083 18.4 0.4 0.001 18.1 0.4 1.1 1 0 0 1 1 1 1 SCL-interrupting locus protein N-terminus BCAS2 PF05700.11 CCF74595.1 - 1.3e-13 51.2 10.2 1.7e-13 50.8 10.2 1.1 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) TSP_NTD PF17804.1 CCF74595.1 - 0.14 12.4 12.5 8.1 6.7 12.4 2.4 1 1 0 1 1 1 0 Tail specific protease N-terminal domain Spore_III_AB PF09548.10 CCF74595.1 - 0.23 11.6 8.2 0.47 10.5 1.6 2.2 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) DUF4446 PF14584.6 CCF74595.1 - 0.3 11.0 8.0 1.4 8.9 0.7 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) Pkinase PF00069.25 CCF74596.1 - 3.1e-69 233.3 0.0 4.7e-69 232.7 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74596.1 - 1.7e-28 99.6 0.0 2.5e-28 99.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 CCF74596.1 - 1.8e-09 37.9 3.6 2.3e-06 27.9 0.9 3.1 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 CCF74596.1 - 8.6e-08 31.2 1.6 0.00045 19.6 0.2 3.6 3 0 0 3 3 3 2 EF hand EF-hand_5 PF13202.6 CCF74596.1 - 1.6e-07 30.5 1.2 8.7e-05 21.8 0.4 2.7 2 0 0 2 2 2 2 EF hand EF-hand_8 PF13833.6 CCF74596.1 - 2e-07 30.7 0.6 7.9e-05 22.4 0.3 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 CCF74596.1 - 1.3e-06 27.8 5.0 0.0064 16.3 0.3 3.8 3 0 0 3 3 3 2 EF-hand domain Kinase-like PF14531.6 CCF74596.1 - 0.0028 17.0 0.0 0.0064 15.8 0.0 1.6 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 CCF74596.1 - 0.0036 16.7 0.0 0.0067 15.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family EF-hand_4 PF12763.7 CCF74596.1 - 0.0045 16.9 0.6 0.41 10.6 0.2 2.8 1 1 1 2 2 2 1 Cytoskeletal-regulatory complex EF hand FTA2 PF13095.6 CCF74596.1 - 0.017 14.7 0.2 1.6 8.3 0.0 2.3 1 1 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 EF-hand_13 PF17958.1 CCF74596.1 - 0.042 13.6 0.2 3.9 7.3 0.1 3.2 3 0 0 3 3 3 0 EF-hand domain APH PF01636.23 CCF74596.1 - 0.063 13.2 0.0 0.1 12.5 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family DivIC PF04977.15 CCF74597.1 - 5.7 6.8 16.5 0.95 9.3 0.9 4.1 2 2 2 4 4 4 0 Septum formation initiator AAA_18 PF13238.6 CCF74598.1 - 8.1e-21 74.9 0.0 1.1e-20 74.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 CCF74598.1 - 1.8e-07 31.7 0.0 3.8e-07 30.6 0.0 1.8 1 1 0 1 1 1 1 AAA domain DUF815 PF05673.13 CCF74598.1 - 5.3e-05 22.5 0.0 9.7e-05 21.6 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA PF00004.29 CCF74598.1 - 0.00017 22.1 0.0 0.00073 20.0 0.0 1.9 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 CCF74598.1 - 0.0021 18.2 0.0 0.01 16.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 CCF74598.1 - 0.0025 18.0 0.0 0.0074 16.4 0.0 1.7 2 0 0 2 2 2 1 Adenylate kinase AAA_22 PF13401.6 CCF74598.1 - 0.0026 18.0 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 CCF74598.1 - 0.004 16.2 0.1 0.27 10.2 0.0 2.1 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 CCF74598.1 - 0.0049 16.9 0.0 0.012 15.7 0.0 1.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 CCF74598.1 - 0.0053 17.2 0.0 0.0074 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 CCF74598.1 - 0.0071 16.3 0.4 0.017 15.0 0.1 1.8 2 0 0 2 2 2 1 NTPase Viral_helicase1 PF01443.18 CCF74598.1 - 0.009 15.8 0.0 0.015 15.0 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase Cytidylate_kin PF02224.18 CCF74598.1 - 0.014 15.1 0.0 0.031 14.0 0.0 1.6 2 0 0 2 2 2 0 Cytidylate kinase RNA_helicase PF00910.22 CCF74598.1 - 0.016 15.6 0.0 0.041 14.3 0.0 1.7 2 0 0 2 2 2 0 RNA helicase RsgA_GTPase PF03193.16 CCF74598.1 - 0.022 14.7 0.2 0.065 13.1 0.0 1.8 2 0 0 2 2 2 0 RsgA GTPase AAA_5 PF07728.14 CCF74598.1 - 0.032 14.2 0.2 0.077 13.0 0.1 1.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 CCF74598.1 - 0.045 13.5 0.0 0.083 12.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATP_bind_1 PF03029.17 CCF74598.1 - 0.049 13.4 0.6 0.26 11.0 0.1 2.0 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein DnaB_C PF03796.15 CCF74598.1 - 0.05 12.9 0.1 0.11 11.8 0.0 1.5 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain Mg_chelatase PF01078.21 CCF74598.1 - 0.053 12.9 0.0 0.076 12.4 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 CCF74598.1 - 0.056 13.7 0.0 0.096 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain Roc PF08477.13 CCF74598.1 - 0.056 13.7 0.0 0.096 12.9 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase NACHT PF05729.12 CCF74598.1 - 0.056 13.4 0.1 0.12 12.2 0.1 1.6 1 0 0 1 1 1 0 NACHT domain SKI PF01202.22 CCF74598.1 - 0.06 13.5 0.2 2.1 8.4 0.0 2.4 2 1 1 3 3 3 0 Shikimate kinase dNK PF01712.19 CCF74598.1 - 0.073 12.9 0.2 0.79 9.5 0.0 2.2 2 1 0 2 2 2 0 Deoxynucleoside kinase Zeta_toxin PF06414.12 CCF74598.1 - 0.12 11.6 0.1 0.33 10.2 0.0 1.6 2 0 0 2 2 2 0 Zeta toxin FtsK_SpoIIIE PF01580.18 CCF74598.1 - 0.13 11.5 0.0 0.25 10.7 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family IstB_IS21 PF01695.17 CCF74598.1 - 0.14 11.9 0.2 0.5 10.1 0.0 1.9 2 1 0 2 2 2 0 IstB-like ATP binding protein Methyltr_RsmB-F PF01189.17 CCF74599.1 - 2.4e-28 99.2 0.0 6.1e-28 97.8 0.0 1.7 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Ubie_methyltran PF01209.18 CCF74599.1 - 1.2e-07 31.4 0.0 4.1e-07 29.6 0.0 1.7 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 CCF74599.1 - 5.3e-06 26.3 0.0 1.7e-05 24.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltr_RsmF_N PF17125.5 CCF74599.1 - 0.00028 21.3 0.0 0.00062 20.2 0.0 1.6 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_25 PF13649.6 CCF74599.1 - 0.0029 18.3 0.0 0.025 15.3 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 CCF74599.1 - 0.0051 16.4 0.0 0.31 10.6 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase small domain FtsJ PF01728.19 CCF74599.1 - 0.026 14.7 0.0 0.075 13.1 0.0 1.8 1 1 0 1 1 1 0 FtsJ-like methyltransferase DUF4762 PF15959.5 CCF74600.1 - 0.085 12.8 0.1 0.16 12.0 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4762) SpoIIM PF01944.17 CCF74600.1 - 0.21 11.6 9.8 0.57 10.2 9.8 1.8 1 1 0 1 1 1 0 Stage II sporulation protein M DUF21 PF01595.20 CCF74600.1 - 0.32 10.7 6.4 2.8 7.6 6.4 2.0 1 1 0 1 1 1 0 Cyclin M transmembrane N-terminal domain RNA_POL_M_15KD PF02150.16 CCF74601.1 - 1.9e-10 40.4 3.4 1.9e-10 40.4 3.4 2.6 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit TFIIS_C PF01096.18 CCF74601.1 - 2.6e-05 24.0 2.1 2.6e-05 24.0 2.1 3.0 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) YdjO PF14169.6 CCF74601.1 - 0.031 14.0 5.9 0.14 11.9 0.2 3.1 3 0 0 3 3 3 0 Cold-inducible protein YdjO CDH-cyt PF16010.5 CCF74601.1 - 0.16 11.6 2.7 0.092 12.4 0.4 1.8 1 1 1 2 2 2 0 Cytochrome domain of cellobiose dehydrogenase DpnI PF06044.12 CCF74601.1 - 8.9 5.9 12.1 0.34 10.5 4.3 2.0 1 1 1 2 2 2 0 Dam-replacing family GFA PF04828.14 CCF74601.1 - 9.6 6.6 11.1 8.8 6.7 1.3 3.7 1 1 2 3 3 3 0 Glutathione-dependent formaldehyde-activating enzyme Evr1_Alr PF04777.13 CCF74602.1 - 2e-18 66.7 0.2 2.6e-18 66.3 0.2 1.1 1 0 0 1 1 1 1 Erv1 / Alr family Mod_r PF07200.13 CCF74604.1 - 0.055 13.6 9.3 0.17 12.0 9.0 1.8 1 1 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Csm1_N PF18504.1 CCF74604.1 - 0.47 10.8 5.6 0.2 12.0 2.2 2.1 2 0 0 2 2 2 0 Csm1 N-terminal domain bZIP_2 PF07716.15 CCF74604.1 - 3.4 7.8 4.5 1.3 9.1 1.2 2.0 2 0 0 2 2 2 0 Basic region leucine zipper ADK PF00406.22 CCF74608.1 - 3.7e-35 121.3 0.0 5.1e-35 120.8 0.0 1.2 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 CCF74608.1 - 3.1e-27 95.7 0.0 3.9e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CCF74608.1 - 9.3e-06 25.9 0.0 2.3e-05 24.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CCF74608.1 - 1.2e-05 25.8 0.0 2.2e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain RabGAP-TBC PF00566.18 CCF74609.1 - 5.5e-44 150.4 1.9 5.5e-44 150.4 1.9 2.4 2 1 0 2 2 2 1 Rab-GTPase-TBC domain DUF4603 PF15376.6 CCF74609.1 - 0.0066 13.9 0.4 0.0087 13.5 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4603) NRBF2 PF08961.10 CCF74609.1 - 0.23 11.0 1.2 0.38 10.3 0.5 1.6 2 0 0 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator Uso1_p115_C PF04871.13 CCF74610.1 - 0.0038 17.6 6.8 0.0038 17.6 6.8 2.2 1 1 1 2 2 2 1 Uso1 / p115 like vesicle tethering protein, C terminal region BMFP PF04380.13 CCF74610.1 - 0.26 11.8 6.1 0.075 13.5 2.5 2.1 2 1 0 2 2 2 0 Membrane fusogenic activity LMBR1 PF04791.16 CCF74610.1 - 0.78 8.6 9.3 0.97 8.3 9.3 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein FapA PF03961.13 CCF74610.1 - 1.3 7.6 9.0 1.7 7.2 9.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A PHF5 PF03660.14 CCF74611.1 - 0.029 14.6 0.1 0.041 14.1 0.1 1.3 1 0 0 1 1 1 0 PHF5-like protein TFIIB PF00382.19 CCF74612.1 - 1.9e-08 34.2 1.5 1.9e-05 24.6 0.1 2.6 2 1 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 CCF74612.1 - 5.1e-07 29.1 3.7 9.5e-07 28.2 3.7 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_Tnp_ISL3 PF13542.6 CCF74612.1 - 0.0014 18.0 0.0 0.012 15.0 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_36 PF13730.6 CCF74612.1 - 0.0087 16.0 0.3 0.67 9.9 0.0 3.6 5 0 0 5 5 5 1 Helix-turn-helix domain Ribosomal_S27e PF01667.17 CCF74612.1 - 0.051 13.3 0.7 0.11 12.3 0.7 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 HTH_23 PF13384.6 CCF74612.1 - 0.055 13.3 0.2 0.47 10.3 0.1 2.4 2 0 0 2 2 2 0 Homeodomain-like domain JAB PF01398.21 CCF74613.1 - 7.6e-31 106.5 0.0 1.6e-30 105.5 0.0 1.6 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 CCF74613.1 - 4e-10 40.1 0.9 6.7e-10 39.4 0.9 1.3 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function Prok-JAB PF14464.6 CCF74613.1 - 5e-09 36.0 0.0 8.1e-09 35.3 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain AP_endonuc_2 PF01261.24 CCF74613.1 - 0.098 12.1 0.0 0.23 10.8 0.0 1.6 2 0 0 2 2 2 0 Xylose isomerase-like TIM barrel PIP5K PF01504.18 CCF74614.1 - 1.2e-75 254.3 4.9 4.2e-75 252.5 4.9 1.9 1 1 0 1 1 1 1 Phosphatidylinositol-4-phosphate 5-Kinase EF-hand_8 PF13833.6 CCF74614.1 - 0.0004 20.2 0.7 0.0049 16.7 0.2 2.8 3 0 0 3 3 3 1 EF-hand domain pair EF-hand_7 PF13499.6 CCF74614.1 - 0.0025 18.2 0.4 0.025 15.0 0.2 2.7 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 CCF74614.1 - 0.0066 15.9 0.8 0.39 10.4 0.1 3.0 3 0 0 3 3 3 1 EF hand Topoisom_I PF01028.20 CCF74616.1 - 2.6e-95 318.1 3.0 2.6e-95 318.1 3.0 2.2 2 0 0 2 2 2 1 Eukaryotic DNA topoisomerase I, catalytic core Topoisom_I_N PF02919.15 CCF74616.1 - 2.2e-74 249.6 1.8 7.3e-74 247.9 1.8 1.9 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topo_C_assoc PF14370.6 CCF74616.1 - 5.3e-22 77.5 4.1 5.8e-22 77.4 0.6 2.8 2 0 0 2 2 2 1 C-terminal topoisomerase domain CREPT PF16566.5 CCF74616.1 - 0.084 13.1 2.3 0.33 11.1 2.3 2.0 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour AGOG PF09171.10 CCF74616.1 - 0.16 11.3 2.2 0.36 10.1 2.2 1.5 1 0 0 1 1 1 0 N-glycosylase/DNA lyase LRS4 PF10422.9 CCF74616.1 - 0.42 10.1 7.6 0.034 13.7 2.0 2.1 2 0 0 2 2 2 0 Monopolin complex subunit LRS4 PDCD2_C PF04194.13 CCF74617.1 - 2.3e-17 63.6 1.2 2.6e-16 60.2 0.1 2.0 2 0 0 2 2 2 2 Programmed cell death protein 2, C-terminal putative domain Kinesin PF00225.23 CCF74618.1 - 0.046 12.6 2.9 0.086 11.7 2.4 1.6 2 0 0 2 2 2 0 Kinesin motor domain US22 PF02393.16 CCF74621.1 - 0.13 12.6 0.1 0.24 11.7 0.1 1.6 1 0 0 1 1 1 0 US22 like Glutaredoxin PF00462.24 CCF74622.1 - 1.1e-16 60.7 0.0 1.7e-16 60.1 0.0 1.3 1 0 0 1 1 1 1 Glutaredoxin SH3BGR PF04908.15 CCF74622.1 - 0.054 13.7 0.0 0.13 12.5 0.0 1.7 1 1 0 1 1 1 0 SH3-binding, glutamic acid-rich protein GST_N_3 PF13417.6 CCF74622.1 - 0.092 13.2 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Glutathione S-transferase, N-terminal domain Methyltransf_23 PF13489.6 CCF74623.1 - 1.5e-13 51.0 0.0 2.5e-13 50.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF74623.1 - 2.3e-11 44.2 0.0 3.9e-11 43.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF74623.1 - 1.2e-10 41.9 0.0 1.9e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF74623.1 - 1.9e-10 40.7 0.1 2.8e-10 40.2 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF74623.1 - 1.2e-09 38.8 0.0 2.2e-09 38.0 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 CCF74623.1 - 6.4e-09 35.5 0.0 9.6e-09 34.9 0.0 1.2 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 CCF74623.1 - 1.4e-08 34.6 0.0 1.9e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) PrmA PF06325.13 CCF74623.1 - 1.2e-05 24.9 0.0 1.6e-05 24.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 CCF74623.1 - 0.00073 19.6 0.0 0.0011 19.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CCF74623.1 - 0.0017 18.1 0.0 0.0049 16.6 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 3HCDH_N PF02737.18 CCF74623.1 - 0.0018 18.2 0.0 0.0025 17.7 0.0 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TehB PF03848.14 CCF74623.1 - 0.0024 17.3 0.1 0.0034 16.8 0.1 1.3 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_PK PF05891.12 CCF74623.1 - 0.0033 17.0 0.0 0.0048 16.4 0.0 1.1 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase MTS PF05175.14 CCF74623.1 - 0.004 16.7 0.0 0.0078 15.8 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.11 CCF74623.1 - 0.0076 15.9 0.0 0.01 15.5 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_15 PF09445.10 CCF74623.1 - 0.0081 15.7 0.1 0.017 14.7 0.1 1.6 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 CCF74623.1 - 0.0084 15.2 0.0 0.013 14.6 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_18 PF12847.7 CCF74623.1 - 0.076 12.9 0.0 0.13 12.2 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 CCF74623.1 - 0.078 12.7 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Lysine methyltransferase Nuc_deoxyri_tr3 PF11071.8 CCF74624.1 - 0.071 13.2 0.0 0.1 12.7 0.0 1.2 1 0 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase YtoQ PurL_C PF16904.5 CCF74624.1 - 0.14 12.4 0.8 0.29 11.5 0.8 1.5 1 1 0 1 1 1 0 Phosphoribosylformylglycinamidine synthase II C-terminus GYF PF02213.16 CCF74625.1 - 1.5e-13 50.1 4.3 2.7e-13 49.3 4.3 1.4 1 0 0 1 1 1 1 GYF domain DUF3989 PF13150.6 CCF74627.1 - 0.0011 18.6 1.5 1 9.1 0.1 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF3989) ribosomal_L24 PF17136.4 CCF74628.1 - 2.5e-13 50.2 1.9 2.5e-13 50.2 1.9 1.9 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 CCF74628.1 - 0.00013 21.8 1.0 0.00032 20.6 1.0 1.7 1 0 0 1 1 1 1 KOW motif DUF4866 PF16160.5 CCF74628.1 - 0.05 12.9 0.1 0.073 12.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4866) Cyclin_N PF00134.23 CCF74631.1 - 0.017 14.8 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 Cyclin, N-terminal domain PutA_N PF18083.1 CCF74631.1 - 0.034 14.2 0.3 0.49 10.4 0.1 2.3 2 0 0 2 2 2 0 Proline utilization A N-terminal domain Pkinase PF00069.25 CCF74632.1 - 1.3e-56 191.9 0.0 1.5e-56 191.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74632.1 - 8e-32 110.5 0.0 1.2e-31 110.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF74632.1 - 5.4e-05 22.6 0.0 7.8e-05 22.1 0.0 1.2 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 CCF74632.1 - 0.00045 19.6 0.2 0.00092 18.6 0.2 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 CCF74632.1 - 0.097 11.4 0.1 0.15 10.8 0.1 1.2 1 0 0 1 1 1 0 Fungal protein kinase TTD PF12148.8 CCF74633.1 - 0.038 13.8 0.2 4.1 7.2 0.2 2.5 1 1 0 2 2 2 0 Tandem tudor domain within UHRF1 WD40 PF00400.32 CCF74634.1 - 9.7e-05 23.1 0.2 0.011 16.6 0.0 3.3 3 0 0 3 3 3 1 WD domain, G-beta repeat PQQ_3 PF13570.6 CCF74634.1 - 0.017 15.6 0.0 6.7 7.3 0.0 3.3 3 0 0 3 3 3 0 PQQ-like domain NHL PF01436.21 CCF74634.1 - 0.14 12.3 1.3 21 5.4 0.0 3.4 3 0 0 3 3 3 0 NHL repeat EXS PF03124.14 CCF74635.1 - 2.7e-52 178.2 22.7 2.7e-52 178.2 22.7 1.4 2 0 0 2 2 2 1 EXS family SPX PF03105.19 CCF74635.1 - 1.4e-11 45.0 6.2 3.2e-05 24.1 0.7 2.2 2 0 0 2 2 2 2 SPX domain PAD PF03068.15 CCF74635.1 - 0.067 12.2 0.2 0.15 11.0 0.2 1.5 1 0 0 1 1 1 0 Protein-arginine deiminase (PAD) zf-RING_2 PF13639.6 CCF74636.1 - 1.1e-10 41.6 5.9 1.9e-10 40.9 5.9 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_11 PF17123.5 CCF74636.1 - 1.5e-06 27.8 4.1 1.5e-06 27.8 4.1 2.3 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 CCF74636.1 - 3.8e-06 27.1 5.9 1.1e-05 25.7 5.9 1.7 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 CCF74636.1 - 7.4e-06 25.7 4.9 1.4e-05 24.8 4.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 CCF74636.1 - 1.1e-05 25.2 2.9 1.8e-05 24.5 2.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF74636.1 - 4.4e-05 23.3 2.1 7.3e-05 22.6 2.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 CCF74636.1 - 0.00016 21.6 0.8 0.00037 20.5 0.8 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger RINGv PF12906.7 CCF74636.1 - 0.00092 19.3 3.8 0.0018 18.4 3.8 1.5 1 0 0 1 1 1 1 RING-variant domain zf-C3HC4 PF00097.25 CCF74636.1 - 0.0019 18.0 4.6 0.0037 17.1 4.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF74636.1 - 0.0055 16.5 4.1 0.011 15.6 4.1 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 CCF74636.1 - 0.0056 16.7 1.0 0.0056 16.7 1.0 2.2 1 1 1 2 2 2 1 RING-type zinc-finger FANCL_C PF11793.8 CCF74636.1 - 0.034 14.3 4.2 0.17 12.0 4.3 2.0 1 1 0 1 1 1 0 FANCL C-terminal domain ThiD2 PF17792.1 CCF74636.1 - 0.082 13.4 0.0 0.12 12.8 0.0 1.2 1 0 0 1 1 1 0 ThiD2 family Zn_ribbon_17 PF17120.5 CCF74636.1 - 0.17 11.5 2.0 0.33 10.6 2.0 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type CCSMST1 PF15013.6 CCF74636.1 - 0.22 11.7 0.2 0.22 11.7 0.2 2.5 3 1 0 3 3 2 0 CCSMST1 family DUF4271 PF14093.6 CCF74636.1 - 0.24 11.3 19.5 0.39 10.6 19.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4271) DUF3566 PF12089.8 CCF74636.1 - 0.6 10.5 9.0 2.5 8.5 0.1 3.3 3 0 0 3 3 3 0 Transmembrane domain of unknown function (DUF3566) Prok-RING_1 PF14446.6 CCF74636.1 - 1.2 9.2 3.2 4.3 7.4 0.6 2.2 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Wzy_C PF04932.15 CCF74636.1 - 2.7 7.6 7.4 3.4 7.3 2.1 2.2 2 0 0 2 2 2 0 O-Antigen ligase DUF2070 PF09843.9 CCF74636.1 - 3.5 5.8 13.3 4.8 5.4 13.3 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PHF5 PF03660.14 CCF74637.1 - 1.1e-48 163.7 17.0 2.9e-48 162.4 17.0 1.8 1 0 0 1 1 1 1 PHF5-like protein GTP_EFTU PF00009.27 CCF74637.1 - 2e-32 112.3 1.6 5.7e-32 110.8 0.0 2.6 2 2 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 CCF74637.1 - 2.7e-17 62.8 0.1 7.9e-17 61.3 0.1 1.8 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 CCF74637.1 - 9.5e-14 51.1 0.1 7.7e-13 48.2 0.0 2.5 3 0 0 3 3 3 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 CCF74637.1 - 8.2e-13 48.6 11.5 8.2e-08 32.5 0.9 3.7 4 0 0 4 4 4 2 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF74637.1 - 4.9e-06 26.6 0.1 2.3e-05 24.4 0.0 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 CCF74637.1 - 0.00014 22.0 0.0 0.00047 20.4 0.0 1.9 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase CLASP_N PF12348.8 CCF74638.1 - 0.00037 20.1 0.2 0.00057 19.5 0.2 1.2 1 0 0 1 1 1 1 CLASP N terminal Dioxygenase_N PF04444.14 CCF74638.1 - 0.031 14.1 0.0 0.071 13.0 0.0 1.6 1 0 0 1 1 1 0 Catechol dioxygenase N terminus zf-B_box PF00643.24 CCF74639.1 - 3.3e-05 23.9 10.2 6.5e-05 23.0 10.2 1.5 1 0 0 1 1 1 1 B-box zinc finger GTP_EFTU PF00009.27 CCF74640.1 - 1.3e-21 77.0 0.6 3.2e-20 72.5 0.6 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 CCF74640.1 - 2.3e-11 43.8 0.0 5.8e-11 42.4 0.0 1.7 1 0 0 1 1 1 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 CCF74640.1 - 2.1e-10 40.7 0.0 4.8e-10 39.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CCF74640.1 - 7.1e-06 26.0 0.1 0.00048 20.1 0.0 2.6 1 1 1 2 2 2 1 RsgA GTPase SRPRB PF09439.10 CCF74640.1 - 1.2e-05 24.9 0.0 2.4e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 CCF74640.1 - 0.00058 19.4 0.3 0.0017 17.9 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU_D4 PF14578.6 CCF74640.1 - 0.009 15.9 0.3 0.029 14.3 0.3 1.9 1 0 0 1 1 1 1 Elongation factor Tu domain 4 AAA_29 PF13555.6 CCF74640.1 - 0.014 15.1 0.0 0.032 14.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain PduV-EutP PF10662.9 CCF74640.1 - 0.019 14.7 0.0 0.041 13.6 0.0 1.6 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation Dynamin_N PF00350.23 CCF74640.1 - 0.03 14.4 4.2 0.28 11.2 0.0 3.4 2 2 1 3 3 3 0 Dynamin family Ras PF00071.22 CCF74640.1 - 0.035 13.7 0.0 0.075 12.6 0.0 1.5 1 0 0 1 1 1 0 Ras family AIG1 PF04548.16 CCF74640.1 - 0.078 12.3 0.0 0.16 11.2 0.0 1.4 1 0 0 1 1 1 0 AIG1 family Roc PF08477.13 CCF74640.1 - 0.12 12.5 0.0 0.48 10.7 0.0 2.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase CWC25 PF12542.8 CCF74641.1 - 3.9e-09 37.3 3.4 3.9e-09 37.3 3.4 3.4 2 1 1 3 3 3 1 Pre-mRNA splicing factor RCC1 PF00415.18 CCF74642.1 - 2e-15 57.1 9.4 3.8e-07 30.6 0.9 5.6 5 1 0 5 5 5 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 CCF74642.1 - 3.7e-10 39.3 14.3 0.0063 16.3 0.0 5.7 5 1 0 5 5 5 3 Regulator of chromosome condensation (RCC1) repeat zf-RING_14 PF17978.1 CCF74642.1 - 0.13 12.8 1.7 42 4.6 0.0 3.3 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain Peptidase_S10 PF00450.22 CCF74643.1 - 0.00016 21.2 0.1 0.0006 19.3 0.1 2.1 1 1 0 1 1 1 1 Serine carboxypeptidase Cutinase PF01083.22 CCF74643.1 - 0.028 14.4 0.0 0.049 13.6 0.0 1.3 1 0 0 1 1 1 0 Cutinase Thioesterase PF00975.20 CCF74643.1 - 0.1 12.7 0.0 0.22 11.6 0.0 1.5 1 0 0 1 1 1 0 Thioesterase domain Hydrolase_4 PF12146.8 CCF74643.1 - 0.2 10.9 0.0 0.9 8.7 0.0 1.9 2 1 0 2 2 2 0 Serine aminopeptidase, S33 Lip_prot_lig_C PF10437.9 CCF74645.1 - 2.2e-08 34.0 0.0 7.3e-08 32.3 0.0 1.9 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus BPL_LplA_LipB PF03099.19 CCF74645.1 - 1.8e-05 24.7 0.1 0.00016 21.6 0.1 2.2 1 1 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Pinin_SDK_memA PF04696.13 CCF74646.1 - 4.8e-16 59.0 12.5 7.2e-16 58.4 12.5 1.2 1 0 0 1 1 1 1 pinin/SDK/memA/ protein conserved region AAA_23 PF13476.6 CCF74646.1 - 0.017 15.6 12.4 0.026 15.0 12.4 1.4 1 0 0 1 1 1 0 AAA domain L27_1 PF09058.10 CCF74646.1 - 0.049 13.6 2.1 0.16 12.0 2.1 1.8 1 0 0 1 1 1 0 L27_1 Prominin PF05478.11 CCF74646.1 - 0.073 11.0 3.5 0.089 10.7 3.5 1.2 1 0 0 1 1 1 0 Prominin Holin_BhlA PF10960.8 CCF74646.1 - 0.81 9.7 7.3 6.5 6.8 7.3 2.3 1 1 0 1 1 1 0 BhlA holin family Goodbye PF17109.5 CCF74646.1 - 1.3 9.4 4.3 1.2 9.6 1.8 2.1 1 1 1 2 2 2 0 fungal STAND N-terminal Goodbye domain LMBR1 PF04791.16 CCF74646.1 - 1.5 7.6 3.8 1.8 7.4 3.8 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein MDFI PF15316.6 CCF74646.1 - 6.2 6.9 5.9 3.2 7.8 3.5 1.7 1 1 1 2 2 2 0 MyoD family inhibitor Ribonuc_red_sm PF00268.21 CCF74647.1 - 9.5e-37 127.0 7.0 1.9e-36 126.0 7.0 1.4 1 1 0 1 1 1 1 Ribonucleotide reductase, small chain PRP38 PF03371.15 CCF74647.1 - 0.0041 17.0 1.4 0.13 12.1 1.2 2.2 2 0 0 2 2 2 2 PRP38 family EMP24_GP25L PF01105.24 CCF74648.1 - 1.1e-18 67.8 1.4 1.2e-18 67.7 1.4 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD SPASM PF13186.6 CCF74648.1 - 0.037 14.5 0.1 0.087 13.4 0.0 1.7 1 1 1 2 2 2 0 Iron-sulfur cluster-binding domain TBCC PF07986.12 CCF74649.1 - 4.7e-28 97.3 3.2 6.9e-28 96.8 3.2 1.3 1 0 0 1 1 1 1 Tubulin binding cofactor C CAP_C PF08603.11 CCF74649.1 - 1.2 8.8 7.9 2.1 7.9 7.5 1.5 1 1 0 1 1 1 0 Adenylate cyclase associated (CAP) C terminal Exo_endo_phos PF03372.23 CCF74650.1 - 0.00031 20.3 0.0 0.0014 18.2 0.0 2.0 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PDEase_I PF00233.19 CCF74651.1 - 8.3e-70 235.2 0.2 3.1e-69 233.3 0.2 2.0 2 0 0 2 2 2 1 3'5'-cyclic nucleotide phosphodiesterase DUF1366 PF07104.11 CCF74651.1 - 0.0064 16.2 1.0 0.015 15.0 1.0 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF1366) SH PF01445.17 CCF74651.1 - 1.1 9.3 8.3 0.14 12.1 0.3 2.7 2 0 0 2 2 2 0 Viral small hydrophobic protein GOLGA2L5 PF15070.6 CCF74652.1 - 0.003 16.3 1.1 0.0037 16.0 1.1 1.1 1 0 0 1 1 1 1 Putative golgin subfamily A member 2-like protein 5 IcmF_C PF06744.12 CCF74652.1 - 0.0052 16.4 0.0 0.01 15.5 0.0 1.5 1 1 0 1 1 1 1 Type VI secretion protein IcmF C-terminal Csm1_N PF18504.1 CCF74652.1 - 0.055 13.8 2.2 0.4 11.0 2.3 2.3 1 1 1 2 2 2 0 Csm1 N-terminal domain LMBR1 PF04791.16 CCF74652.1 - 4.7 6.0 7.7 6.2 5.6 7.7 1.3 1 1 0 1 1 1 0 LMBR1-like membrane protein zf-CCHC_2 PF13696.6 CCF74653.1 - 2.2e-08 33.8 4.1 6.3e-08 32.3 4.1 1.8 1 0 0 1 1 1 1 Zinc knuckle zf-C3HC4_4 PF15227.6 CCF74653.1 - 0.026 14.7 13.0 0.026 14.7 13.0 2.1 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-C3HC4 PF00097.25 CCF74653.1 - 0.14 12.0 14.4 0.029 14.2 10.2 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) TF_Zn_Ribbon PF08271.12 CCF74653.1 - 0.28 10.7 10.8 18 4.9 8.8 3.4 3 1 0 3 3 3 0 TFIIB zinc-binding zf-RING_6 PF14835.6 CCF74653.1 - 0.32 10.9 4.6 0.75 9.7 4.6 1.6 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_UBOX PF13445.6 CCF74653.1 - 0.46 10.5 11.2 1 9.4 11.2 1.6 1 0 0 1 1 1 0 RING-type zinc-finger DUF1610 PF07754.11 CCF74653.1 - 0.96 9.5 11.2 0.87 9.6 0.8 2.8 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-RING_5 PF14634.6 CCF74653.1 - 1.2 9.1 15.2 0.33 10.9 9.6 2.4 2 0 0 2 2 2 0 zinc-RING finger domain Ribosomal_L37ae PF01780.19 CCF74653.1 - 1.6 8.8 5.5 2.2 8.5 0.2 3.1 2 1 0 3 3 3 0 Ribosomal L37ae protein family zf-CCHC PF00098.23 CCF74653.1 - 2.7 8.2 8.9 0.19 11.9 2.5 2.4 2 0 0 2 2 2 0 Zinc knuckle zf-RING_10 PF16685.5 CCF74653.1 - 6.8 6.9 11.8 0.43 10.7 5.1 2.2 2 0 0 2 2 2 0 zinc RING finger of MSL2 Desulfoferrod_N PF06397.12 CCF74653.1 - 8.8 6.0 8.2 24 4.6 0.1 3.0 2 1 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain Metallophos PF00149.28 CCF74654.1 - 5.8e-41 141.2 0.1 7.3e-41 140.9 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 CCF74654.1 - 2.5e-20 72.6 1.2 2.5e-19 69.4 0.8 2.2 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain Beta-lactamase PF00144.24 CCF74655.1 - 3.7e-22 79.0 0.0 3.2e-21 75.9 0.0 2.0 2 0 0 2 2 2 1 Beta-lactamase ABC1 PF03109.16 CCF74655.1 - 1.5e-20 73.5 0.0 6.1e-20 71.6 0.0 2.0 2 0 0 2 2 2 1 ABC1 family APH PF01636.23 CCF74655.1 - 0.0012 18.8 0.0 0.0045 16.9 0.1 1.7 2 0 0 2 2 2 1 Phosphotransferase enzyme family RIO1 PF01163.22 CCF74655.1 - 0.0024 17.5 0.0 0.0058 16.3 0.0 1.6 1 0 0 1 1 1 1 RIO1 family CAF1C_H4-bd PF12265.8 CCF74655.1 - 0.1 12.8 0.3 0.37 11.1 0.3 2.0 1 0 0 1 1 1 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex mRNA_cap_enzyme PF01331.19 CCF74656.1 - 2.3e-44 151.6 0.0 3.2e-44 151.1 0.0 1.2 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain mRNA_cap_C PF03919.15 CCF74656.1 - 1.8e-15 57.5 0.1 1.8e-14 54.3 0.0 2.5 2 1 0 2 2 2 1 mRNA capping enzyme, C-terminal domain DNA_ligase_A_M PF01068.21 CCF74656.1 - 0.037 13.7 0.0 0.5 10.0 0.0 2.8 2 1 0 2 2 2 0 ATP dependent DNA ligase domain UCH PF00443.29 CCF74657.1 - 3.7e-35 121.7 1.1 8.6e-35 120.5 1.1 1.7 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 CCF74657.1 - 6.9e-19 68.6 6.6 8.4e-19 68.3 2.8 2.7 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase Peptidase_C98 PF15499.6 CCF74657.1 - 5.6e-05 22.7 2.2 9.1e-05 22.1 0.6 2.1 2 0 0 2 2 2 1 Ubiquitin-specific peptidase-like, SUMO isopeptidase DUF5106 PF17127.4 CCF74657.1 - 0.079 13.2 0.9 0.27 11.5 0.3 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF5106) DUF5472 PF17566.2 CCF74657.1 - 0.081 12.9 1.1 4.4 7.3 0.0 2.8 3 0 0 3 3 3 0 Family of unknown function (DUF5472) DUF1694 PF07997.11 CCF74657.1 - 0.1 12.7 0.8 0.28 11.3 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1694) zf-LITAF-like PF10601.9 CCF74657.1 - 1.9 8.8 0.0 1.9 8.8 0.0 3.3 4 0 0 4 4 4 0 LITAF-like zinc ribbon domain zf-RING_4 PF14570.6 CCF74657.1 - 7.3 6.5 6.7 7.9 6.4 0.3 2.9 3 0 0 3 3 3 0 RING/Ubox like zinc-binding domain Proteasom_Rpn13 PF04683.13 CCF74658.1 - 2.7e-23 82.3 0.0 3.3e-23 82.0 0.0 1.1 1 0 0 1 1 1 1 Proteasome complex subunit Rpn13 ubiquitin receptor DnaJ PF00226.31 CCF74659.1 - 1.3e-11 44.5 0.2 3.1e-11 43.2 0.2 1.7 1 0 0 1 1 1 1 DnaJ domain Hydrolase_4 PF12146.8 CCF74660.1 - 0.00029 20.2 0.1 0.42 9.8 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 CCF74660.1 - 0.035 13.9 0.3 0.24 11.2 0.3 2.0 1 1 0 1 1 1 0 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 CCF74660.1 - 0.11 12.4 0.0 0.15 11.9 0.0 1.2 1 0 0 1 1 1 0 alpha/beta hydrolase fold HxlR PF01638.17 CCF74662.1 - 0.09 12.6 0.0 0.1 12.4 0.0 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix mTERF PF02536.14 CCF74663.1 - 0.00042 19.3 0.0 0.0093 14.9 0.0 2.0 2 0 0 2 2 2 2 mTERF DUF3562 PF12085.8 CCF74663.1 - 0.16 11.6 0.0 0.28 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3562) Uso1_p115_C PF04871.13 CCF74664.1 - 0.013 15.9 5.2 0.013 15.9 5.2 1.8 2 1 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region DUF745 PF05335.13 CCF74664.1 - 0.068 12.9 5.7 0.22 11.2 5.6 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF745) CP12 PF02672.15 CCF74664.1 - 0.36 11.6 3.6 5.3 7.9 0.5 2.7 1 1 1 2 2 2 0 CP12 domain TMF_TATA_bd PF12325.8 CCF74664.1 - 0.82 9.9 13.4 0.15 12.3 0.8 3.3 2 1 1 4 4 4 0 TATA element modulatory factor 1 TATA binding TPR_MLP1_2 PF07926.12 CCF74664.1 - 0.93 9.6 8.3 2.8 8.0 1.9 2.4 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF349 PF03993.12 CCF74664.1 - 2 8.8 6.0 2.6 8.4 0.3 2.6 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) TMPIT PF07851.13 CCF74664.1 - 6.4 5.9 6.2 3.7 6.7 2.2 2.1 1 1 0 2 2 2 0 TMPIT-like protein eRF1_1 PF03463.15 CCF74665.1 - 8.2e-20 71.1 0.0 1.7e-19 70.1 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 CCF74665.1 - 2.5e-07 31.2 0.0 4.9e-07 30.2 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 3 DUF3828 PF12883.7 CCF74665.1 - 0.1 13.0 0.0 8.9 6.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3828) Pam16 PF03656.13 CCF74666.1 - 2e-06 27.8 0.1 3.3e-06 27.1 0.0 1.4 2 0 0 2 2 2 1 Pam16 DnaJ PF00226.31 CCF74666.1 - 0.00016 21.7 0.0 0.00023 21.2 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain RRP7 PF12923.7 CCF74667.1 - 4.1e-08 33.4 4.7 3.3e-07 30.5 4.7 2.0 1 1 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain DUF5093 PF17011.5 CCF74667.1 - 0.00014 22.1 1.3 0.00019 21.7 1.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF5093) COX6C PF02937.15 CCF74667.1 - 1.7 8.9 6.2 0.57 10.3 2.0 2.2 2 1 1 3 3 3 0 Cytochrome c oxidase subunit VIc PCI PF01399.27 CCF74669.1 - 6.5e-06 26.6 0.1 2.2e-05 24.9 0.1 2.0 1 1 0 1 1 1 1 PCI domain TPR_2 PF07719.17 CCF74669.1 - 0.24 11.6 0.9 1.2 9.4 0.3 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat RNA_pol_Rpb4 PF03874.16 CCF74670.1 - 1e-12 48.4 0.1 1.2e-12 48.2 0.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 Nucleoporin_FG PF13634.6 CCF74672.1 - 1.5e-53 179.6 267.9 2.5e-13 50.7 34.5 8.0 1 1 7 8 8 8 8 Nucleoporin FG repeat region Nsp1_C PF05064.13 CCF74672.1 - 2.2e-08 33.9 10.3 2.2e-08 33.9 10.3 2.3 1 1 0 2 2 2 1 Nsp1-like C-terminal region Casc1 PF12366.8 CCF74672.1 - 0.02 14.4 1.4 0.047 13.2 1.3 1.5 1 1 0 1 1 1 0 Cancer susceptibility candidate 1 Ribosomal_L22e PF01776.17 CCF74672.1 - 0.19 12.1 0.7 0.35 11.3 0.7 1.4 1 0 0 1 1 1 0 Ribosomal L22e protein family Peptidase_M16 PF00675.20 CCF74672.1 - 2.7 8.0 4.3 27 4.7 0.6 2.3 2 0 0 2 2 2 0 Insulinase (Peptidase family M16) AAA_23 PF13476.6 CCF74672.1 - 3.1 8.3 9.1 6.2 7.3 9.1 1.5 1 0 0 1 1 1 0 AAA domain Lon_C PF05362.13 CCF74673.1 - 7.9e-65 218.2 0.1 1.3e-64 217.6 0.1 1.3 1 0 0 1 1 1 1 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 CCF74673.1 - 5e-28 98.4 0.0 9e-28 97.6 0.0 1.4 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 CCF74673.1 - 4.2e-17 62.8 0.0 1e-16 61.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) ChlI PF13541.6 CCF74673.1 - 1.1e-08 34.9 0.2 2e-08 34.1 0.2 1.4 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase AAA_PrkA PF08298.11 CCF74673.1 - 4.8e-06 25.7 0.0 8.2e-06 25.0 0.0 1.3 1 0 0 1 1 1 1 PrkA AAA domain AAA_5 PF07728.14 CCF74673.1 - 5.5e-05 23.2 0.0 0.00029 20.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 CCF74673.1 - 7.7e-05 22.5 0.0 0.00033 20.4 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 CCF74673.1 - 0.00029 21.0 0.0 0.00083 19.5 0.0 1.7 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 CCF74673.1 - 0.0027 18.1 0.0 0.0078 16.6 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CCF74673.1 - 0.0031 17.8 0.4 0.18 12.1 0.4 2.5 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 CCF74673.1 - 0.0059 15.8 0.0 0.012 14.8 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain IstB_IS21 PF01695.17 CCF74673.1 - 0.033 13.9 0.0 0.066 12.9 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_18 PF13238.6 CCF74673.1 - 0.04 14.5 0.9 0.16 12.5 0.0 2.5 3 0 0 3 3 3 0 AAA domain Fer4_24 PF18109.1 CCF74673.1 - 0.11 12.8 0.1 2.2 8.6 0.1 2.4 2 0 0 2 2 2 0 Ferredoxin I 4Fe-4S cluster domain SET PF00856.28 CCF74674.1 - 2.5e-22 80.0 3.4 3.5e-22 79.6 0.8 2.5 2 1 0 2 2 2 1 SET domain LSM PF01423.22 CCF74675.1 - 1.4e-20 72.7 0.1 1.7e-20 72.4 0.1 1.1 1 0 0 1 1 1 1 LSM domain PP2C PF00481.21 CCF74676.1 - 2.6e-44 151.8 0.3 4e-44 151.2 0.3 1.3 1 0 0 1 1 1 1 Protein phosphatase 2C THUMP PF02926.17 CCF74676.1 - 0.0012 19.0 0.0 0.0054 16.8 0.0 2.2 1 1 0 1 1 1 1 THUMP domain SpoIIE PF07228.12 CCF74676.1 - 0.0065 16.4 0.0 0.092 12.6 0.0 2.7 3 0 0 3 3 3 1 Stage II sporulation protein E (SpoIIE) PIG-S PF10510.9 CCF74677.1 - 1.6e-11 43.7 0.8 2.8e-11 43.0 0.8 1.3 1 0 0 1 1 1 1 Phosphatidylinositol-glycan biosynthesis class S protein AAA PF00004.29 CCF74678.1 - 1e-38 132.7 0.4 3.2e-38 131.2 0.4 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF74678.1 - 1.6e-10 40.6 0.5 3.7e-10 39.5 0.5 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 CCF74678.1 - 0.00096 19.3 0.0 0.002 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) DUF2072 PF09845.9 CCF74678.1 - 0.0048 17.1 0.3 0.012 15.9 0.3 1.6 1 0 0 1 1 1 1 Zn-ribbon containing protein RuvB_N PF05496.12 CCF74678.1 - 0.011 15.4 0.0 0.025 14.3 0.0 1.5 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain Prot_ATP_ID_OB PF16450.5 CCF74678.1 - 0.015 15.3 0.2 0.042 13.8 0.2 1.8 1 0 0 1 1 1 0 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 CCF74678.1 - 0.016 15.2 0.1 0.055 13.5 0.1 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF74678.1 - 0.084 13.2 0.8 4 7.8 0.1 3.1 2 1 1 3 3 3 0 AAA ATPase domain RRM_1 PF00076.22 CCF74679.1 - 4.9e-07 29.5 0.0 1.1e-06 28.4 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf_CCCH_4 PF18345.1 CCF74679.1 - 1.3e-06 28.2 1.3 3.8e-06 26.8 1.3 1.9 1 0 0 1 1 1 1 Zinc finger domain zf-CCCH PF00642.24 CCF74679.1 - 3.1e-06 26.9 2.3 3.6e-06 26.7 0.6 2.1 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 CCF74679.1 - 2.1e-05 25.2 0.1 4.2e-05 24.2 0.1 1.5 1 0 0 1 1 1 1 Torus domain zf-CCCH_4 PF18044.1 CCF74679.1 - 0.00081 19.1 0.6 0.0023 17.7 0.6 1.9 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 CCF74679.1 - 0.099 13.2 1.1 0.099 13.2 1.1 2.2 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger RRM_occluded PF16842.5 CCF74679.1 - 0.1 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 Occluded RNA-recognition motif FYVE PF01363.21 CCF74679.1 - 2.2 8.5 9.2 0.23 11.6 4.3 2.0 2 1 0 2 2 2 0 FYVE zinc finger Peptidase_C1 PF00112.23 CCF74680.1 - 2.6e-26 93.1 9.5 1e-12 48.6 6.4 3.2 1 1 1 2 2 2 2 Papain family cysteine protease CathepsinC_exc PF08773.11 CCF74680.1 - 7.4e-09 35.9 0.9 1.7e-07 31.5 0.9 2.8 1 1 0 1 1 1 1 Cathepsin C exclusion domain Peptidase_C1_2 PF03051.15 CCF74680.1 - 1.6 7.4 3.9 1 8.0 1.6 1.7 2 0 0 2 2 2 0 Peptidase C1-like family Actin PF00022.19 CCF74681.1 - 1.5e-138 461.9 0.0 8.5e-138 459.4 0.0 1.8 1 1 0 1 1 1 1 Actin Med26 PF08711.11 CCF74683.1 - 2.9e-06 27.2 0.9 1.8e-05 24.7 0.0 2.4 2 0 0 2 2 2 1 TFIIS helical bundle-like domain PaaX PF07848.12 CCF74683.1 - 0.18 12.0 0.1 1.7 8.9 0.0 2.5 3 0 0 3 3 3 0 PaaX-like protein MS_channel PF00924.18 CCF74684.1 - 6.5e-08 32.4 1.0 1.3e-07 31.4 1.0 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF1500 PF07389.12 CCF74684.1 - 0.026 14.6 1.1 3.6 7.7 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1500) Rad51 PF08423.11 CCF74685.1 - 2.9e-114 380.6 0.0 5.7e-114 379.7 0.0 1.5 2 0 0 2 2 2 1 Rad51 RecA PF00154.21 CCF74685.1 - 7.2e-10 38.8 0.0 4.7e-05 23.0 0.0 2.1 2 0 0 2 2 2 2 recA bacterial DNA recombination protein AAA_25 PF13481.6 CCF74685.1 - 4.8e-06 26.3 0.0 1e-05 25.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain ATPase PF06745.13 CCF74685.1 - 0.00019 20.8 0.0 0.00039 19.8 0.0 1.6 1 1 0 1 1 1 1 KaiC HHH_5 PF14520.6 CCF74685.1 - 0.00054 20.5 0.0 0.0012 19.4 0.0 1.6 1 0 0 1 1 1 1 Helix-hairpin-helix domain AAA_24 PF13479.6 CCF74685.1 - 0.026 14.2 0.0 0.044 13.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Pescadillo_N PF06732.11 CCF74686.1 - 1.4e-76 257.7 1.4 2.1e-76 257.1 1.4 1.1 1 0 0 1 1 1 1 Pescadillo N-terminus BRCT_2 PF16589.5 CCF74686.1 - 1.1e-05 25.7 0.3 0.00013 22.3 0.0 2.5 2 1 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain MS_channel PF00924.18 CCF74687.1 - 4.5e-12 45.9 3.9 7.3e-12 45.3 3.9 1.4 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2935 PF11155.8 CCF74689.1 - 0.018 15.4 0.3 0.83 10.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF2935) Mago_nashi PF02792.14 CCF74690.1 - 8.5e-62 207.5 0.1 9.5e-62 207.3 0.1 1.0 1 0 0 1 1 1 1 Mago nashi protein ANAPC4_WD40 PF12894.7 CCF74691.1 - 0.00071 19.8 0.4 0.39 11.0 0.0 3.5 3 1 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain DUF3365 PF11845.8 CCF74691.1 - 0.061 13.6 0.2 0.1 12.9 0.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3365) RAB3GAP2_N PF14655.6 CCF74691.1 - 0.066 12.5 0.1 7.4 5.7 0.1 2.2 1 1 0 2 2 2 0 Rab3 GTPase-activating protein regulatory subunit N-terminus PQQ_3 PF13570.6 CCF74691.1 - 0.081 13.4 0.0 17 6.0 0.0 2.8 2 0 0 2 2 2 0 PQQ-like domain PQQ PF01011.21 CCF74691.1 - 0.15 12.0 5.0 13 5.9 0.0 3.8 3 0 0 3 3 3 0 PQQ enzyme repeat START PF01852.19 CCF74692.1 - 0.0003 20.3 0.0 0.0004 19.9 0.0 1.3 1 1 0 1 1 1 1 START domain zf-CCCH_2 PF14608.6 CCF74693.1 - 9.7e-09 35.4 26.4 0.0005 20.4 7.7 3.6 3 0 0 3 3 3 3 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 CCF74693.1 - 2.5e-05 24.0 25.2 0.0009 19.0 2.6 3.9 3 1 0 3 3 3 2 CCCH-type zinc finger zf-CCCH PF00642.24 CCF74693.1 - 4.7e-05 23.2 10.2 0.0015 18.4 1.3 4.0 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 CCF74693.1 - 0.00077 19.4 10.0 0.0025 17.8 2.3 4.6 6 0 0 6 6 6 2 Zinc finger domain Nab2p_Zf1 PF18260.1 CCF74693.1 - 0.019 14.9 0.4 0.019 14.9 0.4 2.2 2 0 0 2 2 2 0 Nuclear polyadenylated RNA-binding 2 protein CCCH zinc finger 1 AMP-binding PF00501.28 CCF74694.1 - 1e-88 297.8 0.0 1.3e-88 297.4 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 CCF74694.1 - 1.3e-24 86.9 0.1 2.7e-24 85.9 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 CCF74694.1 - 8.7e-18 64.0 1.0 8.7e-18 64.0 1.0 2.0 2 1 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus Cas_St_Csn2 PF16813.5 CCF74694.1 - 0.044 12.9 1.1 0.097 11.8 1.1 1.6 1 1 0 1 1 1 0 CRISPR-associated protein Csn2 subfamily St HEAT_EZ PF13513.6 CCF74695.1 - 2.3e-13 50.3 4.7 3.6e-08 33.8 0.0 6.1 6 0 0 6 6 6 2 HEAT-like repeat HEAT PF02985.22 CCF74695.1 - 3.1e-13 48.7 17.4 0.00047 20.2 0.0 7.5 8 0 0 8 8 8 4 HEAT repeat HEAT_2 PF13646.6 CCF74695.1 - 2e-09 37.7 0.3 0.0014 19.0 0.0 4.1 3 1 1 4 4 4 2 HEAT repeats Cnd1 PF12717.7 CCF74695.1 - 4.7e-08 33.3 2.3 0.01 15.9 0.1 4.7 3 1 1 4 4 4 2 non-SMC mitotic condensation complex subunit 1 DUF3437 PF11919.8 CCF74695.1 - 0.00013 21.8 1.1 1.7 8.6 0.0 4.3 5 0 0 5 5 5 2 Domain of unknown function (DUF3437) Adaptin_N PF01602.20 CCF74695.1 - 0.00021 20.0 2.5 0.00078 18.1 0.1 2.8 2 1 1 3 3 3 2 Adaptin N terminal region DNA_alkylation PF08713.11 CCF74695.1 - 0.00054 19.7 0.3 0.025 14.3 0.1 3.2 2 1 0 2 2 2 1 DNA alkylation repair enzyme Vac14_Fab1_bd PF12755.7 CCF74695.1 - 0.0043 17.6 0.1 0.76 10.4 0.1 3.6 3 0 0 3 3 3 1 Vacuolar 14 Fab1-binding region Arm PF00514.23 CCF74695.1 - 0.0066 16.5 2.3 6 7.1 0.2 4.8 5 0 0 5 5 5 1 Armadillo/beta-catenin-like repeat Thioredoxin PF00085.20 CCF74697.1 - 5.5e-25 87.3 0.1 6.4e-25 87.1 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 CCF74697.1 - 9.5e-07 29.1 0.1 8.1e-06 26.1 0.1 1.9 1 1 1 2 2 2 2 Thioredoxin-like AhpC-TSA PF00578.21 CCF74697.1 - 8.7e-05 22.4 0.1 9.7e-05 22.3 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Thioredoxin_9 PF14595.6 CCF74697.1 - 9.6e-05 22.2 0.1 0.00011 21.9 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CCF74697.1 - 0.00039 20.8 0.0 0.0033 17.8 0.0 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 CCF74697.1 - 0.0022 17.4 0.1 0.0026 17.1 0.1 1.2 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Redoxin PF08534.10 CCF74697.1 - 0.0047 16.6 0.1 0.0083 15.8 0.1 1.5 1 1 1 2 2 2 1 Redoxin Thioredoxin_7 PF13899.6 CCF74697.1 - 0.062 13.5 0.1 0.1 12.8 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like Phosducin PF02114.16 CCF74697.1 - 0.079 11.9 0.0 0.089 11.7 0.0 1.0 1 0 0 1 1 1 0 Phosducin HyaE PF07449.11 CCF74697.1 - 0.094 12.7 0.0 0.14 12.1 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Peptidase_A22B PF04258.13 CCF74698.1 - 3.7e-53 180.9 9.5 4.6e-53 180.6 9.5 1.1 1 0 0 1 1 1 1 Signal peptide peptidase DUF167 PF02594.16 CCF74699.1 - 2.7e-24 85.1 0.1 3.2e-24 84.8 0.1 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 Ribosomal_L28 PF00830.19 CCF74700.1 - 7.4e-06 26.1 0.0 1.4e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 Ribosomal L28 family Adaptin_N PF01602.20 CCF74702.1 - 1.8e-87 294.1 3.6 1.4e-86 291.2 3.5 1.9 2 0 0 2 2 2 1 Adaptin N terminal region Cnd1 PF12717.7 CCF74702.1 - 8.5e-06 25.9 3.1 0.031 14.3 0.0 3.0 2 0 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 CCF74702.1 - 0.098 13.1 0.0 16 6.0 0.0 3.2 3 0 0 3 3 3 0 HEAT repeats ParcG PF10274.9 CCF74702.1 - 0.39 10.8 4.0 0.17 12.0 0.2 2.3 2 0 0 2 2 2 0 Parkin co-regulated protein C2 PF00168.30 CCF74703.1 - 4.4e-07 30.1 0.0 2 8.8 0.0 4.0 3 0 0 3 3 3 3 C2 domain Ferlin_C PF16165.5 CCF74703.1 - 0.025 14.5 0.0 0.053 13.5 0.0 1.5 1 0 0 1 1 1 0 Ferlin C-terminus F5_F8_type_C PF00754.25 CCF74705.1 - 2.4e-10 40.6 5.0 3.4e-08 33.7 0.1 3.5 3 0 0 3 3 3 2 F5/8 type C domain COLFI PF01410.18 CCF74705.1 - 1.4e-06 27.8 0.9 3.9e-06 26.3 0.0 2.2 2 0 0 2 2 2 1 Fibrillar collagen C-terminal domain Ricin_B_lectin PF00652.22 CCF74705.1 - 4.2e-05 23.8 0.0 0.1 12.9 0.1 2.9 1 1 1 2 2 2 2 Ricin-type beta-trefoil lectin domain Calsarcin PF05556.11 CCF74707.1 - 0.12 11.9 0.0 0.15 11.6 0.0 1.1 1 0 0 1 1 1 0 Calcineurin-binding protein (Calsarcin) Arm PF00514.23 CCF74710.1 - 0.0064 16.5 0.2 0.22 11.6 0.0 3.4 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat PUL PF08324.11 CCF74710.1 - 0.0075 15.5 0.6 0.0075 15.5 0.6 1.8 1 1 1 2 2 2 1 PUL domain HEAT_2 PF13646.6 CCF74710.1 - 0.017 15.5 0.1 0.19 12.1 0.0 2.7 2 1 1 3 3 3 0 HEAT repeats Methyltransf_25 PF13649.6 CCF74711.1 - 3.7e-07 30.8 0.0 6.5e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF74711.1 - 2e-06 27.8 0.0 2.5e-06 27.4 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF74711.1 - 2.7e-06 28.0 0.1 4.8e-06 27.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF74711.1 - 2.2e-05 25.0 0.0 3.7e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF74711.1 - 0.00011 22.1 0.1 0.00017 21.4 0.1 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_32 PF13679.6 CCF74711.1 - 0.0002 21.4 0.1 0.00022 21.2 0.1 1.2 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 CCF74711.1 - 0.00032 20.1 0.0 0.00063 19.1 0.0 1.4 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase MetW PF07021.12 CCF74711.1 - 0.00073 19.2 0.0 0.001 18.7 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_2 PF00891.18 CCF74711.1 - 0.0029 16.9 0.0 0.0058 15.9 0.0 1.3 1 1 0 1 1 1 1 O-methyltransferase domain Ubie_methyltran PF01209.18 CCF74711.1 - 0.0055 16.1 0.0 0.022 14.1 0.0 1.8 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family PrmA PF06325.13 CCF74711.1 - 0.073 12.4 0.0 0.09 12.2 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_8 PF05148.15 CCF74711.1 - 0.089 12.6 0.0 0.19 11.5 0.0 1.7 1 1 0 1 1 1 0 Hypothetical methyltransferase Chorion_3 PF05387.11 CCF74712.1 - 0.02 14.5 6.8 0.027 14.1 6.8 1.2 1 0 0 1 1 1 0 Chorion family 3 Extensin_2 PF04554.13 CCF74712.1 - 0.026 14.6 4.6 0.046 13.8 4.6 1.4 1 0 0 1 1 1 0 Extensin-like region CYSTM PF12734.7 CCF74712.1 - 0.046 14.1 2.9 0.046 14.1 2.9 2.8 2 1 0 2 2 2 0 Cysteine-rich TM module stress tolerance WD40 PF00400.32 CCF74713.1 - 0.086 13.7 0.7 11 7.1 0.0 4.1 4 1 0 4 4 4 0 WD domain, G-beta repeat NAP PF00956.18 CCF74714.1 - 9.3e-21 74.2 0.1 1.2e-20 73.9 0.1 1.1 1 0 0 1 1 1 1 Nucleosome assembly protein (NAP) WD40 PF00400.32 CCF74715.1 - 2.9e-26 91.2 13.7 5.2e-07 30.3 0.2 7.6 7 1 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF74715.1 - 9e-07 29.1 0.1 8.4 6.8 0.0 5.0 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain SF-assemblin PF06705.11 CCF74716.1 - 1.6e-34 119.4 25.8 2.3e-34 118.8 25.8 1.1 1 0 0 1 1 1 1 SF-assemblin/beta giardin HSBP1 PF06825.12 CCF74716.1 - 0.035 14.0 3.0 18 5.3 1.7 3.9 4 1 0 4 4 4 0 Heat shock factor binding protein 1 DUF1870 PF08965.10 CCF74716.1 - 0.42 10.6 4.4 0.35 10.9 1.4 2.3 1 1 0 2 2 2 0 Domain of unknown function (DUF1870) V_ATPase_I PF01496.19 CCF74716.1 - 2.2 6.1 17.4 0.096 10.6 3.9 2.1 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family Syntaxin-6_N PF09177.11 CCF74716.1 - 3.3 8.3 12.2 6.2 7.4 5.0 2.9 1 1 0 2 2 2 0 Syntaxin 6, N-terminal GvpL_GvpF PF06386.11 CCF74716.1 - 5.4 6.9 7.7 6.5 6.6 4.1 2.2 1 1 1 2 2 2 0 Gas vesicle synthesis protein GvpL/GvpF RWD PF05773.22 CCF74717.1 - 1e-06 29.0 0.2 4.1e-06 27.1 0.2 2.0 1 1 0 1 1 1 1 RWD domain DFRP_C PF16543.5 CCF74717.1 - 0.014 15.8 0.1 0.028 14.9 0.1 1.4 1 0 0 1 1 1 0 DRG Family Regulatory Proteins, Tma46 BRE PF06113.12 CCF74717.1 - 0.025 13.4 0.0 0.038 12.8 0.0 1.2 1 0 0 1 1 1 0 Brain and reproductive organ-expressed protein (BRE) Herpes_glycop PF01528.16 CCF74717.1 - 0.11 11.4 0.0 0.15 10.9 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus glycoprotein M XPG_N PF00752.17 CCF74719.1 - 1.1e-21 77.2 0.0 2.8e-21 75.9 0.0 1.8 1 0 0 1 1 1 1 XPG N-terminal domain XPG_I PF00867.18 CCF74719.1 - 7.5e-20 71.1 0.0 4.7e-19 68.5 0.0 2.4 2 1 0 2 2 2 1 XPG I-region 5_3_exonuc PF01367.20 CCF74719.1 - 8.4e-05 23.1 0.0 0.00021 21.8 0.0 1.7 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold XPG_I_2 PF12813.7 CCF74719.1 - 8.9e-05 22.1 0.0 0.00015 21.3 0.0 1.4 1 0 0 1 1 1 1 XPG domain containing BES1_N PF05687.13 CCF74719.1 - 0.047 14.1 2.4 0.11 12.9 2.4 1.6 1 0 0 1 1 1 0 BES1/BZR1 plant transcription factor, N-terminal Frag1 PF10277.9 CCF74719.1 - 0.069 12.7 0.7 1.5 8.3 0.2 2.1 2 0 0 2 2 2 0 Frag1/DRAM/Sfk1 family Laminin_G_3 PF13385.6 CCF74721.1 - 0.00032 20.9 0.0 0.083 13.0 0.0 2.5 1 1 1 2 2 2 2 Concanavalin A-like lectin/glucanases superfamily tRNA-synt_1d PF00750.19 CCF74723.1 - 1.6e-102 343.0 0.2 2.4e-102 342.5 0.2 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 CCF74723.1 - 2.5e-27 95.4 0.0 8.6e-27 93.7 0.0 1.9 2 0 0 2 2 2 1 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 CCF74723.1 - 1.4e-09 38.4 0.1 3.2e-09 37.2 0.1 1.7 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain NOG1_N PF17835.1 CCF74723.1 - 0.0022 18.0 0.0 0.34 10.8 0.0 2.6 2 0 0 2 2 2 1 NOG1 N-terminal helical domain tRNA-synt_1e PF01406.19 CCF74723.1 - 0.015 14.6 0.8 0.057 12.7 0.1 2.3 2 1 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain SRI PF08236.11 CCF74723.1 - 0.55 10.4 3.1 0.51 10.6 0.4 2.3 2 1 0 2 2 2 0 SRI (Set2 Rpb1 interacting) domain PI3_PI4_kinase PF00454.27 CCF74724.1 - 1.4e-26 93.8 0.1 4.6e-23 82.3 0.1 2.7 1 1 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase Sec23_helical PF04815.15 CCF74724.1 - 0.047 13.5 0.9 0.3 10.9 0.5 2.6 2 0 0 2 2 2 0 Sec23/Sec24 helical domain zf-C2H2_jaz PF12171.8 CCF74725.1 - 1.8e-07 31.3 1.9 2.8e-07 30.6 1.9 1.3 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 CCF74725.1 - 4.5e-07 30.0 2.0 7.5e-07 29.3 2.0 1.4 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-U1 PF06220.12 CCF74725.1 - 0.00041 20.0 0.7 0.00074 19.2 0.7 1.4 1 0 0 1 1 1 1 U1 zinc finger zf-C2H2_2 PF12756.7 CCF74725.1 - 0.074 13.4 0.1 0.11 12.8 0.1 1.3 1 0 0 1 1 1 0 C2H2 type zinc-finger (2 copies) TBPIP_N PF15517.6 CCF74726.1 - 0.0045 17.0 2.9 0.6 10.2 0.5 2.3 2 0 0 2 2 2 2 TBP-interacting protein N-terminus Syntaxin PF00804.25 CCF74726.1 - 0.014 15.1 0.4 0.064 12.9 0.4 2.1 2 1 0 2 2 2 0 Syntaxin SNARE PF05739.19 CCF74726.1 - 0.028 14.4 0.4 0.11 12.5 0.4 2.1 1 0 0 1 1 1 0 SNARE domain Phlebovirus_G1 PF07243.11 CCF74727.1 - 0.067 11.6 0.0 0.068 11.5 0.0 1.0 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Osmo_MPGsynth PF09488.10 CCF74727.1 - 0.12 11.0 0.0 0.12 11.0 0.0 1.0 1 0 0 1 1 1 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) ECH_2 PF16113.5 CCF74729.1 - 1.5e-26 93.7 0.0 1.5e-22 80.5 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase NDUFB10 PF10249.9 CCF74729.1 - 0.032 14.7 0.1 0.058 13.9 0.1 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase subunit 10 GRASP55_65 PF04495.14 CCF74730.1 - 2e-37 128.6 0.0 2.2e-24 86.3 0.0 2.6 2 1 1 3 3 3 2 GRASP55/65 PDZ-like domain PDZ_6 PF17820.1 CCF74730.1 - 3.7e-06 26.7 0.0 0.008 16.0 0.0 2.6 2 1 0 2 2 2 2 PDZ domain PDZ_2 PF13180.6 CCF74730.1 - 1.6e-05 25.1 0.0 0.17 12.2 0.0 2.3 2 0 0 2 2 2 2 PDZ domain DUF900 PF05990.12 CCF74734.1 - 2.4e-21 76.3 0.1 4.4e-21 75.5 0.1 1.3 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) WD40_like PF17005.5 CCF74735.1 - 0.0012 18.2 0.5 1.3 8.3 0.1 2.2 2 0 0 2 2 2 2 WD40-like domain Sec34 PF04136.15 CCF74736.1 - 0.00055 19.9 9.0 0.027 14.4 0.0 3.1 3 0 0 3 3 3 2 Sec34-like family PRP38 PF03371.15 CCF74738.1 - 5.1e-55 186.0 0.4 5.7e-55 185.8 0.4 1.0 1 0 0 1 1 1 1 PRP38 family CKS PF01111.19 CCF74739.1 - 1.1e-17 64.1 0.2 2.9e-17 62.7 0.1 1.9 2 0 0 2 2 2 1 Cyclin-dependent kinase regulatory subunit Histone PF00125.24 CCF74739.1 - 0.043 14.2 0.1 0.11 12.9 0.1 1.7 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 SPOR PF05036.13 CCF74739.1 - 0.048 14.0 0.0 0.095 13.1 0.0 1.4 1 0 0 1 1 1 0 Sporulation related domain DUF3445 PF11927.8 CCF74740.1 - 0.15 11.7 0.0 5.7 6.5 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3445) S1-P1_nuclease PF02265.16 CCF74741.1 - 6.8e-07 29.4 0.0 1.1e-06 28.7 0.0 1.3 1 0 0 1 1 1 1 S1/P1 Nuclease AP4E_app_platf PF14807.6 CCF74741.1 - 0.19 12.1 0.3 0.34 11.3 0.3 1.4 1 0 0 1 1 1 0 Adaptin AP4 complex epsilon appendage platform Ribosomal_L2_C PF03947.18 CCF74742.1 - 2e-43 147.6 0.9 4e-43 146.6 0.9 1.5 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 CCF74742.1 - 1.8e-20 72.7 0.1 3.5e-20 71.7 0.1 1.5 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain Frataxin_Cyay PF01491.16 CCF74743.1 - 0.00028 20.9 0.0 0.00028 20.9 0.0 2.6 3 0 0 3 3 3 1 Frataxin-like domain Nop14 PF04147.12 CCF74743.1 - 0.028 12.7 12.7 0.15 10.3 1.3 2.4 2 0 0 2 2 2 0 Nop14-like family PGAP1 PF07819.13 CCF74745.1 - 0.0045 16.7 0.0 0.04 13.6 0.0 2.0 2 0 0 2 2 2 1 PGAP1-like protein Hydrolase_4 PF12146.8 CCF74745.1 - 0.01 15.1 0.0 0.029 13.7 0.0 1.7 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 CCF74745.1 - 0.015 14.9 0.0 0.032 13.9 0.0 1.5 2 0 0 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_8 PF06259.12 CCF74745.1 - 0.1 12.3 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase Peptidase_S9 PF00326.21 CCF74745.1 - 0.14 11.6 0.0 0.26 10.7 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family ANAPC4_WD40 PF12894.7 CCF74746.1 - 2.8e-05 24.3 0.0 2.4 8.5 0.0 4.0 2 1 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF74746.1 - 7.9e-05 23.4 0.3 1.1 10.3 0.0 3.9 4 1 1 5 5 5 2 WD domain, G-beta repeat DUF1759 PF03564.15 CCF74748.1 - 0.094 12.7 0.5 6.6 6.7 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1759) MIF4G PF02854.19 CCF74749.1 - 2.2e-23 83.0 0.4 3.3e-23 82.4 0.4 1.3 1 0 0 1 1 1 1 MIF4G domain CNOT1_CAF1_bind PF16415.5 CCF74749.1 - 0.063 12.7 0.5 0.15 11.4 0.1 1.7 2 0 0 2 2 2 0 CCR4-NOT transcription complex subunit 1 CAF1-binding domain ATP-synt_Eps PF04627.13 CCF74752.1 - 6.5e-15 54.9 0.0 7.5e-15 54.6 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ATP synthase epsilon chain GTP_EFTU PF00009.27 CCF74753.1 - 1.2e-35 122.8 0.0 2e-35 122.1 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 CCF74753.1 - 2.4e-16 59.6 0.0 6.7e-16 58.1 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus Arf PF00025.21 CCF74753.1 - 9.1e-05 22.0 0.0 0.00019 20.9 0.0 1.5 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 CCF74753.1 - 0.00052 20.1 0.1 0.0015 18.6 0.1 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D2 PF03144.25 CCF74753.1 - 0.00082 19.7 0.5 0.002 18.5 0.5 1.7 1 0 0 1 1 1 1 Elongation factor Tu domain 2 FeoB_N PF02421.18 CCF74753.1 - 0.0026 17.3 0.0 0.0063 16.0 0.0 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B Flp1_like PF16982.5 CCF74755.1 - 0.086 12.3 0.6 0.16 11.4 0.6 1.4 1 0 0 1 1 1 0 Putative Flagellin, Flp1-like, domain EamA PF00892.20 CCF74756.1 - 0.00041 20.5 12.7 0.0013 18.9 3.5 2.1 2 0 0 2 2 2 2 EamA-like transporter family Sec23_BS PF08033.12 CCF74756.1 - 0.011 16.5 0.0 0.019 15.7 0.0 1.4 1 0 0 1 1 1 0 Sec23/Sec24 beta-sandwich domain GSH_synth_ATP PF03917.17 CCF74756.1 - 0.052 12.3 0.0 0.068 11.9 0.0 1.1 1 0 0 1 1 1 0 Eukaryotic glutathione synthase, ATP binding domain PROCN PF08083.11 CCF74757.1 - 7.5e-228 756.1 6.2 1.1e-227 755.5 6.2 1.2 1 0 0 1 1 1 1 PROCN (NUC071) domain PRP8_domainIV PF12134.8 CCF74757.1 - 2e-122 407.2 0.2 3.2e-122 406.5 0.2 1.3 1 0 0 1 1 1 1 PRP8 domain IV core U6-snRNA_bdg PF10596.9 CCF74757.1 - 3.8e-89 296.7 3.2 1.2e-88 295.1 3.2 1.9 1 0 0 1 1 1 1 U6-snRNA interacting domain of PrP8 PRO8NT PF08082.11 CCF74757.1 - 2.1e-80 268.0 2.8 5.8e-80 266.6 2.8 1.8 1 0 0 1 1 1 1 PRO8NT (NUC069), PrP8 N-terminal domain U5_2-snRNA_bdg PF10597.9 CCF74757.1 - 2.8e-70 234.6 0.0 5.8e-70 233.6 0.0 1.6 1 0 0 1 1 1 1 U5-snRNA binding site 2 of PrP8 RRM_4 PF10598.9 CCF74757.1 - 7.7e-42 141.6 0.3 2.5e-41 139.9 0.3 2.0 1 0 0 1 1 1 1 RNA recognition motif of the spliceosomal PrP8 PROCT PF08084.11 CCF74757.1 - 3.8e-39 133.4 0.5 9.6e-30 103.0 0.0 2.7 2 0 0 2 2 2 2 PROCT (NUC072) domain JAB PF01398.21 CCF74757.1 - 1.3e-06 28.4 0.0 7.1e-06 26.0 0.0 2.1 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Proteasome PF00227.26 CCF74758.1 - 9.1e-29 100.3 0.0 7.8e-20 71.2 0.0 2.5 1 1 2 3 3 3 2 Proteasome subunit Proteasome_A_N PF10584.9 CCF74758.1 - 3e-12 46.0 0.1 5.8e-12 45.0 0.1 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Pentapeptide PF00805.22 CCF74758.1 - 0.064 12.9 0.5 3.8 7.3 0.0 2.4 2 0 0 2 2 2 0 Pentapeptide repeats (8 copies) zf-CCCH PF00642.24 CCF74759.1 - 1.3e-10 40.9 16.5 2.5e-05 24.0 4.0 3.0 3 0 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 CCF74759.1 - 1.1e-05 26.1 1.3 0.14 12.9 0.1 2.5 2 0 0 2 2 2 2 Torus domain zf_CCCH_4 PF18345.1 CCF74759.1 - 8.3e-05 22.5 17.3 0.011 15.7 5.7 3.2 3 1 0 3 3 3 2 Zinc finger domain RRM_1 PF00076.22 CCF74759.1 - 0.00067 19.4 0.0 0.0025 17.6 0.0 1.9 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Stealth_CR3 PF17102.5 CCF74759.1 - 0.045 13.7 0.4 0.11 12.5 0.4 1.7 1 0 0 1 1 1 0 Stealth protein CR3, conserved region 3 RRM_5 PF13893.6 CCF74759.1 - 0.16 11.5 0.0 0.49 10.0 0.0 1.7 1 1 1 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCCH_4 PF18044.1 CCF74759.1 - 0.37 10.6 14.8 1.5 8.7 4.5 3.2 3 0 0 3 3 3 0 CCCH-type zinc finger AAA PF00004.29 CCF74760.1 - 2.7e-12 47.2 0.1 2e-11 44.4 0.0 2.5 2 1 1 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 CCF74760.1 - 0.015 15.8 0.6 0.083 13.4 0.1 2.3 1 1 1 2 2 2 0 AAA domain AAA_22 PF13401.6 CCF74760.1 - 0.04 14.2 0.3 3.3 8.0 0.1 2.7 1 1 1 2 2 2 0 AAA domain TIP49 PF06068.13 CCF74760.1 - 0.053 12.7 0.0 0.094 11.9 0.0 1.4 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_33 PF13671.6 CCF74760.1 - 0.094 12.9 0.0 0.23 11.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 CCF74760.1 - 0.099 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_17 PF13207.6 CCF74760.1 - 0.21 12.0 0.0 0.41 11.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain Arv1 PF04161.13 CCF74763.1 - 1.3e-17 64.7 21.7 9.9e-17 61.8 21.7 2.0 1 1 0 1 1 1 1 Arv1-like family RF-1 PF00472.20 CCF74764.1 - 1.4e-27 95.9 1.0 2.7e-27 95.0 1.0 1.5 1 0 0 1 1 1 1 RF-1 domain PCRF PF03462.18 CCF74764.1 - 6.9e-24 84.8 1.2 2e-22 80.0 0.1 3.0 2 1 0 2 2 2 1 PCRF domain Ribosomal_S6 PF01250.17 CCF74765.1 - 1.8e-05 24.9 0.0 3.8e-05 23.9 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein S6 DUF4897 PF16238.5 CCF74765.1 - 0.039 13.8 0.0 0.067 13.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4897) SEP PF08059.13 CCF74766.1 - 1e-16 61.3 0.1 2e-16 60.3 0.0 1.5 1 1 0 1 1 1 1 SEP domain CRIM PF16978.5 CCF74766.1 - 0.13 12.4 0.1 0.23 11.6 0.1 1.3 1 0 0 1 1 1 0 SAPK-interacting protein 1 (Sin1), middle CRIM domain TPR_19 PF14559.6 CCF74767.1 - 1.3e-09 38.4 0.8 2e-05 25.0 0.0 3.2 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 CCF74767.1 - 7.2e-07 28.8 1.3 0.51 10.6 0.0 4.6 4 0 0 4 4 4 2 Tetratricopeptide repeat Coatomer_E PF04733.14 CCF74767.1 - 1.3e-06 28.1 0.3 0.00016 21.2 0.0 2.6 1 1 2 3 3 3 1 Coatomer epsilon subunit TPR_1 PF00515.28 CCF74767.1 - 2e-06 27.3 0.9 0.075 12.9 0.0 4.6 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF74767.1 - 1.2e-05 25.1 2.8 0.05 13.8 0.0 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF74767.1 - 2e-05 24.8 5.4 0.018 15.2 0.3 4.1 2 1 2 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 CCF74767.1 - 0.00012 22.5 0.1 0.4 11.4 0.0 3.9 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 CCF74767.1 - 0.00025 20.9 2.3 0.32 11.1 0.0 4.1 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 CCF74767.1 - 0.00026 21.5 0.0 1 10.4 0.0 4.6 3 1 2 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF74767.1 - 0.00035 20.8 1.4 1.1 9.6 0.1 3.7 4 1 0 4 4 4 2 Tetratricopeptide repeat NARP1 PF12569.8 CCF74767.1 - 0.00056 19.0 0.1 0.036 13.0 0.0 2.2 1 1 1 2 2 2 2 NMDA receptor-regulated protein 1 TPR_16 PF13432.6 CCF74767.1 - 0.033 14.8 0.0 2.4 8.9 0.0 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 CCF74767.1 - 0.04 14.1 0.1 0.25 11.5 0.0 2.3 3 0 0 3 3 3 0 Tetratricopeptide repeat Pkinase PF00069.25 CCF74770.1 - 3.6e-34 118.3 0.0 6.5e-34 117.5 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74770.1 - 1.5e-24 86.7 0.0 2.5e-24 85.9 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF74770.1 - 7.9e-06 25.4 0.0 2.1e-05 24.0 0.0 1.7 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 CCF74770.1 - 0.022 14.7 0.0 0.037 13.9 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family AAA PF00004.29 CCF74772.1 - 2.1e-09 37.9 0.0 9.5e-09 35.8 0.0 2.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 CCF74773.1 - 2.2e-25 89.0 1.9 1.3e-16 60.7 0.1 2.8 2 1 0 2 2 2 2 50S ribosome-binding GTPase KH_dom-like PF14714.6 CCF74773.1 - 5.1e-19 68.4 0.3 2.1e-18 66.4 0.1 2.2 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RsgA_GTPase PF03193.16 CCF74773.1 - 5.5e-08 32.9 0.2 0.0077 16.1 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AIG1 PF04548.16 CCF74773.1 - 2.8e-07 30.1 4.7 0.0036 16.7 0.0 2.8 2 1 1 3 3 3 2 AIG1 family Dynamin_N PF00350.23 CCF74773.1 - 3.8e-07 30.3 5.5 0.0019 18.3 0.5 4.1 2 2 1 4 4 4 2 Dynamin family FeoB_N PF02421.18 CCF74773.1 - 1.4e-06 27.9 1.9 0.02 14.4 1.5 3.1 2 1 0 2 2 2 2 Ferrous iron transport protein B ABC_tran PF00005.27 CCF74773.1 - 3.3e-06 27.7 0.3 0.043 14.3 0.0 3.5 4 0 0 4 4 4 2 ABC transporter Roc PF08477.13 CCF74773.1 - 3.6e-06 27.2 1.1 0.03 14.5 0.1 3.7 3 1 0 3 3 3 2 Ras of Complex, Roc, domain of DAPkinase DUF815 PF05673.13 CCF74773.1 - 0.00017 20.8 0.1 0.037 13.2 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_16 PF13191.6 CCF74773.1 - 0.00022 21.7 0.0 0.17 12.2 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 CCF74773.1 - 0.00024 20.8 0.0 0.23 11.2 0.0 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain RNA_helicase PF00910.22 CCF74773.1 - 0.0007 20.0 0.3 3.9 7.9 0.0 3.6 2 1 0 2 2 2 2 RNA helicase Septin PF00735.18 CCF74773.1 - 0.00094 18.5 0.4 0.6 9.3 0.1 2.9 2 0 0 2 2 2 2 Septin AAA_22 PF13401.6 CCF74773.1 - 0.001 19.3 0.0 0.49 10.7 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 CCF74773.1 - 0.0013 18.2 0.1 2.4 7.6 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region SRPRB PF09439.10 CCF74773.1 - 0.0028 17.1 0.2 0.021 14.2 0.0 2.3 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit AAA PF00004.29 CCF74773.1 - 0.0052 17.2 0.0 2.4 8.6 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 CCF74773.1 - 0.011 15.9 0.2 0.046 14.0 0.1 2.0 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 CCF74773.1 - 0.016 14.8 0.0 0.62 9.7 0.0 2.2 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain Ras PF00071.22 CCF74773.1 - 0.02 14.5 0.3 12 5.5 0.0 3.3 3 0 0 3 3 3 0 Ras family IIGP PF05049.13 CCF74773.1 - 0.025 13.6 2.5 0.24 10.4 0.4 2.7 2 1 1 3 3 3 0 Interferon-inducible GTPase (IIGP) AAA_14 PF13173.6 CCF74773.1 - 0.069 13.2 0.1 12 6.0 0.0 2.8 2 0 0 2 2 2 0 AAA domain TF_Zn_Ribbon PF08271.12 CCF74776.1 - 0.15 11.6 3.1 1.2 8.7 3.0 2.3 1 1 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 CCF74776.1 - 0.61 9.6 2.7 19 4.8 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Keratin_assoc PF09775.9 CCF74777.1 - 0.092 12.4 0.1 0.21 11.2 0.1 1.5 1 0 0 1 1 1 0 Keratinocyte-associated protein 2 Mito_carr PF00153.27 CCF74779.1 - 9.7e-36 121.6 6.0 9.7e-12 44.6 0.2 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein Cullin PF00888.22 CCF74780.1 - 1.8e-58 198.7 8.1 2.4e-58 198.3 8.1 1.1 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 CCF74780.1 - 0.00028 20.9 0.2 0.00094 19.2 0.0 2.0 2 0 0 2 2 2 1 Cullin protein neddylation domain DUF2833 PF11090.8 CCF74780.1 - 0.046 14.1 0.0 0.24 11.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2833) DUF3437 PF11919.8 CCF74781.1 - 3.8e-17 62.0 0.0 1.6e-16 60.0 0.0 2.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) BLM10_mid PF16507.5 CCF74781.1 - 1.2e-13 50.6 0.2 2.8e-11 42.8 0.1 3.4 2 1 0 2 2 2 2 Proteasome-substrate-size regulator, mid region DUF4714 PF15833.5 CCF74781.1 - 0.041 13.9 1.0 0.089 12.8 1.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4714) S1 PF00575.23 CCF74782.1 - 0.036 14.4 0.0 0.55 10.6 0.0 2.6 2 0 0 2 2 2 0 S1 RNA binding domain HET-s_218-289 PF11558.8 CCF74782.1 - 0.13 12.3 0.0 2.7 8.1 0.0 2.5 2 0 0 2 2 2 0 Het-s 218-289 CAF1 PF04857.20 CCF74784.1 - 1.2e-16 60.8 0.5 1.1e-08 34.7 0.1 2.7 1 1 1 2 2 2 2 CAF1 family ribonuclease DUF2009 PF09418.10 CCF74785.1 - 1.7e-182 607.5 2.1 1.1e-124 417.0 0.1 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2009) DUF433 PF04255.14 CCF74785.1 - 0.072 13.0 0.0 0.22 11.4 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF433) fn3_2 PF16893.5 CCF74785.1 - 0.14 12.3 0.0 0.36 11.0 0.0 1.6 1 0 0 1 1 1 0 Fibronectin type III domain RNase_T PF00929.24 CCF74786.1 - 1.1e-08 35.8 0.0 3.3e-08 34.3 0.0 1.9 1 0 0 1 1 1 1 Exonuclease RNA_pol_Rpb1_3 PF04983.18 CCF74786.1 - 0.094 12.6 0.0 0.23 11.4 0.0 1.7 1 1 0 1 1 1 0 RNA polymerase Rpb1, domain 3 Ras PF00071.22 CCF74788.1 - 1e-41 142.2 0.0 4.7e-41 140.1 0.0 1.8 1 1 0 1 1 1 1 Ras family Roc PF08477.13 CCF74788.1 - 3e-30 104.9 0.2 2.4e-28 98.8 0.0 2.8 2 2 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF74788.1 - 3.2e-11 43.0 0.0 2.6e-09 36.7 0.0 2.2 1 1 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 CCF74788.1 - 4.9e-09 36.0 0.0 6.6e-09 35.6 0.0 1.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 CCF74788.1 - 1.1e-05 24.9 0.0 2.6e-05 23.7 0.0 1.6 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 CCF74788.1 - 0.00027 21.0 0.0 0.00074 19.6 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CCF74788.1 - 0.0033 17.3 0.4 1.9 8.4 0.0 2.3 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 CCF74788.1 - 0.052 13.9 0.2 0.35 11.2 0.2 2.1 1 1 1 2 2 2 0 AAA ATPase domain AAA_24 PF13479.6 CCF74788.1 - 0.1 12.3 0.0 0.72 9.5 0.0 2.1 2 0 0 2 2 2 0 AAA domain HAP2-GCS1 PF10699.9 CCF74789.1 - 5.3e-15 55.1 0.2 1.8e-14 53.4 0.2 2.0 1 0 0 1 1 1 1 Male gamete fusion factor zf-HC5HC2H_2 PF13832.6 CCF74790.1 - 2.4e-23 82.4 49.6 2.2e-10 40.6 0.1 7.2 5 2 0 6 6 6 3 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 CCF74790.1 - 1.5e-08 34.7 11.7 1e-07 32.1 2.5 9.0 6 3 3 9 9 9 2 PHD-like zinc-binding domain PHD_2 PF13831.6 CCF74790.1 - 1.6e-06 27.6 4.9 1.6e-06 27.6 4.9 7.7 7 1 0 7 7 7 4 PHD-finger PHD PF00628.29 CCF74790.1 - 0.00063 19.6 1.8 0.00063 19.6 1.8 9.2 12 0 0 12 12 12 4 PHD-finger Prok-RING_1 PF14446.6 CCF74790.1 - 0.0044 16.9 12.3 0.006 16.5 4.2 6.9 7 1 0 7 7 7 2 Prokaryotic RING finger family 1 C1_2 PF03107.16 CCF74790.1 - 0.0058 16.9 1.7 0.0058 16.9 1.7 9.1 8 2 0 8 8 8 3 C1 domain IGR PF09597.10 CCF74790.1 - 0.038 14.1 0.0 0.12 12.5 0.0 1.9 1 0 0 1 1 1 0 IGR protein motif BppL_N PF18338.1 CCF74790.1 - 0.16 11.8 0.0 0.16 11.8 0.0 1.9 2 0 0 2 2 2 0 Lower baseplate protein N-terminal domain CIAPIN1 PF05093.13 CCF74791.1 - 4.9e-19 68.7 12.2 3.7e-17 62.7 2.6 2.4 1 1 1 2 2 2 2 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Sybindin PF04099.12 CCF74793.1 - 3.3e-31 108.2 0.2 3.7e-31 108.0 0.2 1.0 1 0 0 1 1 1 1 Sybindin-like family Sedlin_N PF04628.13 CCF74793.1 - 0.0053 16.9 0.0 0.0055 16.8 0.0 1.2 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Spec3 PF15795.5 CCF74795.1 - 3e-05 24.5 17.4 0.00056 20.4 7.3 2.4 1 1 1 2 2 2 2 Ectodermal ciliogenesis protein DUF2975 PF11188.8 CCF74795.1 - 0.053 13.4 1.2 0.064 13.1 1.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2975) PI3_PI4_kinase PF00454.27 CCF74796.1 - 4.8e-45 154.3 0.0 8.5e-45 153.5 0.0 1.4 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase tRNA-synt_1 PF00133.22 CCF74797.1 - 1.4e-36 125.9 0.0 1.5e-14 53.2 0.3 4.2 2 2 1 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 CCF74797.1 - 3.2e-09 36.0 0.0 0.00064 18.6 0.0 3.0 4 0 0 4 4 4 2 tRNA synthetases class I (M) CSN8_PSD8_EIF3K PF10075.9 CCF74798.1 - 1.5e-20 73.6 0.3 3e-20 72.7 0.2 1.5 1 1 1 2 2 2 1 CSN8/PSMD8/EIF3K family SAC3_GANP PF03399.16 CCF74798.1 - 0.00013 21.5 0.8 0.0002 20.9 0.1 1.6 2 0 0 2 2 2 1 SAC3/GANP family Adaptin_N PF01602.20 CCF74799.1 - 1.9e-124 416.1 18.9 2.8e-124 415.6 18.9 1.1 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 CCF74799.1 - 1.6e-54 184.3 3.9 6.8e-54 182.3 0.9 3.0 3 0 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 CCF74799.1 - 1.2e-15 57.6 0.1 3.8e-07 30.4 0.0 5.2 3 1 2 5 5 5 4 HEAT repeats HEAT PF02985.22 CCF74799.1 - 2.9e-11 42.6 5.2 0.044 14.1 0.0 6.8 7 0 0 7 7 7 2 HEAT repeat CLASP_N PF12348.8 CCF74799.1 - 4.7e-05 23.1 0.2 0.051 13.1 0.0 3.0 2 1 0 2 2 2 2 CLASP N terminal RTP1_C1 PF10363.9 CCF74799.1 - 0.00018 21.6 2.2 0.6 10.3 0.0 3.9 1 1 2 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 Arm PF00514.23 CCF74799.1 - 0.00063 19.7 4.1 0.24 11.5 0.0 5.1 6 0 0 6 6 6 1 Armadillo/beta-catenin-like repeat RIX1 PF08167.12 CCF74799.1 - 0.072 12.8 5.3 3.9 7.2 0.1 3.6 4 0 0 4 4 4 0 rRNA processing/ribosome biogenesis Ribosomal_L7Ae PF01248.26 CCF74800.1 - 3.2e-11 42.8 0.0 5.9e-11 41.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Apis_Csd PF11671.8 CCF74800.1 - 1.8 8.5 16.2 0.061 13.3 4.2 3.3 3 0 0 3 3 3 0 Complementary sex determiner protein JAB PF01398.21 CCF74801.1 - 1e-09 38.4 0.1 1.7e-07 31.2 0.1 2.5 1 1 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease tRNA-synt_1 PF00133.22 CCF74804.1 - 3.5e-201 669.6 1.2 4.5e-201 669.2 1.2 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 CCF74804.1 - 4.3e-19 69.0 0.3 1.2e-18 67.5 0.2 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 CCF74804.1 - 9.6e-17 60.8 1.1 0.00043 19.1 0.4 4.0 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 CCF74804.1 - 0.00058 19.3 0.0 0.0013 18.1 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain Ins_allergen_rp PF06757.13 CCF74804.1 - 0.049 13.6 0.1 0.17 11.8 0.1 1.9 1 0 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification Cpn10 PF00166.21 CCF74805.1 - 1.3e-15 57.2 0.1 1.2e-11 44.5 0.0 2.0 2 0 0 2 2 2 2 Chaperonin 10 Kd subunit PAP_assoc PF03828.19 CCF74806.1 - 3.8e-10 39.8 0.1 1.1e-09 38.3 0.1 1.8 1 0 0 1 1 1 1 Cid1 family poly A polymerase HalOD1 PF18545.1 CCF74806.1 - 0.18 12.1 0.0 0.8 10.0 0.0 2.1 3 0 0 3 3 3 0 Halobacterial output domain 1 Sedlin_N PF04628.13 CCF74807.1 - 4.4e-33 114.2 0.1 5.1e-33 114.0 0.1 1.0 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Gemini_AL1 PF00799.20 CCF74808.1 - 0.15 12.4 1.4 0.36 11.2 1.4 1.6 1 0 0 1 1 1 0 Geminivirus Rep catalytic domain SPOUT_MTase PF02590.17 CCF74808.1 - 0.27 11.2 0.8 0.69 9.9 0.8 1.6 1 0 0 1 1 1 0 Predicted SPOUT methyltransferase SNARE PF05739.19 CCF74809.1 - 5.9e-08 32.6 3.9 5.9e-08 32.6 3.9 2.8 4 0 0 4 4 4 1 SNARE domain Syntaxin PF00804.25 CCF74809.1 - 1e-07 31.9 10.2 1.9e-07 31.0 10.2 1.4 1 0 0 1 1 1 1 Syntaxin ZnuA PF01297.17 CCF74809.1 - 0.068 12.6 3.4 0.13 11.7 3.4 1.6 1 1 0 1 1 1 0 Zinc-uptake complex component A periplasmic TRPM_tetra PF16519.5 CCF74809.1 - 0.083 13.0 2.3 0.13 12.4 0.4 2.3 2 0 0 2 2 2 0 Tetramerisation domain of TRPM RRP36 PF06102.12 CCF74809.1 - 0.24 11.3 9.5 0.057 13.4 6.0 1.7 2 0 0 2 2 2 0 rRNA biogenesis protein RRP36 Syntaxin-6_N PF09177.11 CCF74809.1 - 0.71 10.5 10.4 0.23 12.1 3.9 3.1 2 2 0 2 2 2 0 Syntaxin 6, N-terminal Snapin_Pallidin PF14712.6 CCF74809.1 - 0.92 10.0 13.3 2.3 8.7 0.2 2.9 3 0 0 3 3 3 0 Snapin/Pallidin DUF1664 PF07889.12 CCF74809.1 - 1.1 9.3 12.1 0.98 9.5 2.2 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) DUF3629 PF12302.8 CCF74809.1 - 1.6 8.1 7.6 0.59 9.5 1.5 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF3629) Baculo_PEP_C PF04513.12 CCF74809.1 - 2.3 8.2 12.0 1.5 8.9 5.5 2.6 2 1 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus YabA PF06156.13 CCF74809.1 - 7.3 7.3 12.2 0.97 10.1 5.1 2.8 2 1 1 3 3 3 0 Initiation control protein YabA Ribosomal_L14 PF00238.19 CCF74810.1 - 9.5e-35 119.3 0.0 1.1e-34 119.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e tRNA-synt_1c PF00749.21 CCF74811.1 - 3.9e-104 347.9 0.0 1.1e-103 346.5 0.0 1.7 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 CCF74811.1 - 4.7e-48 163.3 0.0 8.2e-48 162.6 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain Pkinase PF00069.25 CCF74813.1 - 7.5e-53 179.6 0.0 2.6e-41 141.8 0.0 2.4 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74813.1 - 6.7e-24 84.6 0.0 4.7e-23 81.8 0.0 2.2 1 1 0 1 1 1 1 Protein tyrosine kinase TUDOR PF00567.24 CCF74813.1 - 0.028 14.4 0.2 0.98 9.5 0.0 3.0 3 0 0 3 3 3 0 Tudor domain APH PF01636.23 CCF74813.1 - 0.22 11.4 0.0 0.38 10.6 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Thymidylate_kin PF02223.17 CCF74814.1 - 3.8e-38 131.0 0.0 4.8e-38 130.7 0.0 1.1 1 0 0 1 1 1 1 Thymidylate kinase KTI12 PF08433.10 CCF74814.1 - 0.00033 20.2 0.1 0.0017 17.8 0.1 1.9 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_18 PF13238.6 CCF74814.1 - 0.00063 20.3 0.1 0.0022 18.6 0.1 1.8 1 1 1 2 2 2 1 AAA domain APS_kinase PF01583.20 CCF74814.1 - 0.03 14.2 0.0 0.053 13.4 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_28 PF13521.6 CCF74814.1 - 0.037 14.3 0.0 0.099 12.9 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_22 PF13401.6 CCF74814.1 - 0.072 13.4 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 CCF74814.1 - 0.079 13.0 0.1 0.25 11.4 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CCF74814.1 - 0.2 11.4 0.0 0.31 10.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain Nucleoporin_FG PF13634.6 CCF74815.1 - 5.6e-30 104.0 190.9 9.7e-11 42.4 42.6 6.3 1 1 5 6 6 6 5 Nucleoporin FG repeat region T4SS PF07996.11 CCF74815.1 - 0.56 10.6 5.4 0.67 10.3 4.4 1.6 1 1 0 1 1 1 0 Type IV secretion system proteins DEAD PF00270.29 CCF74816.1 - 3.9e-45 153.8 0.1 3.5e-44 150.6 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74816.1 - 2.1e-29 102.1 0.0 7.7e-29 100.3 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74816.1 - 4.9e-06 26.7 0.1 8.9e-05 22.5 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit zf-CCHC PF00098.23 CCF74816.1 - 0.018 15.1 1.1 0.035 14.2 1.1 1.5 1 0 0 1 1 1 0 Zinc knuckle Ribosomal_L27A PF00828.19 CCF74817.1 - 3.5e-23 82.7 0.1 4.6e-23 82.3 0.1 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TRAPP PF04051.16 CCF74818.1 - 5.6e-19 68.3 0.0 6.5e-19 68.1 0.0 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component RAP PF08373.10 CCF74819.1 - 0.00017 21.6 0.1 0.0014 18.7 0.0 2.5 2 0 0 2 2 2 1 RAP domain Gpi1 PF05024.15 CCF74820.1 - 7.4e-26 91.4 15.7 7.4e-26 91.4 15.7 1.8 2 0 0 2 2 2 1 N-acetylglucosaminyl transferase component (Gpi1) LCCL PF03815.19 CCF74821.1 - 1.2e-11 44.5 1.7 3.9e-11 42.9 1.7 1.8 1 0 0 1 1 1 1 LCCL domain F5_F8_type_C PF00754.25 CCF74821.1 - 2.9e-07 30.7 1.9 0.011 15.9 0.0 4.8 4 1 0 4 4 4 2 F5/8 type C domain COLFI PF01410.18 CCF74821.1 - 0.0012 18.2 0.1 0.0027 17.0 0.1 1.5 1 0 0 1 1 1 1 Fibrillar collagen C-terminal domain TSP_C PF05735.12 CCF74821.1 - 0.054 13.4 1.6 8.7 6.2 0.0 4.2 3 1 0 4 4 4 0 Thrombospondin C-terminal region Bromodomain PF00439.25 CCF74822.1 - 4.2e-20 71.6 2.5 1e-19 70.3 2.5 1.7 1 0 0 1 1 1 1 Bromodomain Vps39_2 PF10367.9 CCF74822.1 - 0.046 14.2 0.0 0.14 12.6 0.0 1.9 1 1 0 1 1 1 0 Vacuolar sorting protein 39 domain 2 MYEOV2 PF15004.6 CCF74822.1 - 0.085 13.3 5.1 0.24 11.9 3.3 2.3 2 0 0 2 2 2 0 Myeloma-overexpressed-like Pox_MCEL PF03291.16 CCF74823.1 - 3.1e-37 128.5 9.0 5e-37 127.8 9.0 1.5 1 0 0 1 1 1 1 mRNA capping enzyme Methyltransf_31 PF13847.6 CCF74823.1 - 1.1e-10 41.5 1.2 1.4e-10 41.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF74823.1 - 8.7e-10 39.2 0.0 8e-09 36.1 0.0 2.5 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF74823.1 - 1.1e-08 35.1 0.0 9.1e-08 32.1 0.0 2.1 1 1 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF74823.1 - 1.9e-08 34.9 0.0 6.2e-08 33.3 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF74823.1 - 2.8e-08 34.3 0.0 5.4e-07 30.2 0.0 2.7 3 0 0 3 3 3 1 Methyltransferase domain mRNA_triPase PF02940.15 CCF74823.1 - 0.022 14.5 0.0 0.062 13.0 0.0 1.9 1 0 0 1 1 1 0 mRNA capping enzyme, beta chain MetW PF07021.12 CCF74823.1 - 0.071 12.7 0.0 0.15 11.7 0.0 1.5 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW LIP1 PF15904.5 CCF74823.1 - 0.085 13.2 0.0 0.27 11.6 0.0 1.9 1 0 0 1 1 1 0 LKB1 serine/threonine kinase interacting protein 1 DPPIV_rep PF18811.1 CCF74823.1 - 9.6 6.3 9.0 0.4 10.7 0.7 3.1 3 0 0 3 3 3 0 Dipeptidyl peptidase IV (DPP IV) low complexity region EMP24_GP25L PF01105.24 CCF74824.1 - 3.9e-16 59.5 4.9 4.5e-16 59.3 4.9 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD ThiF PF00899.21 CCF74825.1 - 3.2e-27 95.5 0.0 7.9e-27 94.2 0.0 1.6 1 1 0 1 1 1 1 ThiF family AP_endonuc_2 PF01261.24 CCF74826.1 - 1.8e-28 99.4 0.0 3.1e-28 98.7 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel DEAD PF00270.29 CCF74827.1 - 6.5e-39 133.5 0.0 2.9e-38 131.4 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74827.1 - 2.1e-27 95.7 5.2 1.5e-25 89.7 0.3 3.3 3 0 0 3 3 3 2 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74827.1 - 4.8e-07 29.9 0.0 1.1e-06 28.7 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit tRNA-synt_1b PF00579.25 CCF74827.1 - 0.036 13.4 0.0 0.066 12.5 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) DcuA_DcuB PF03605.14 CCF74827.1 - 0.12 11.2 0.1 0.17 10.7 0.1 1.2 1 0 0 1 1 1 0 Anaerobic c4-dicarboxylate membrane transporter AAA_22 PF13401.6 CCF74827.1 - 0.14 12.4 0.1 3.9 7.8 0.0 2.8 2 0 0 2 2 2 0 AAA domain eIF-6 PF01912.18 CCF74828.1 - 1.1e-60 204.5 0.7 1.8e-60 203.7 0.6 1.4 2 0 0 2 2 2 1 eIF-6 family Voldacs PF03517.13 CCF74830.1 - 2.1e-23 83.0 2.0 1.1e-20 74.2 2.0 2.2 1 1 0 1 1 1 1 Regulator of volume decrease after cellular swelling PH_TFIIH PF08567.11 CCF74830.1 - 0.057 13.7 0.0 0.15 12.4 0.0 1.7 1 1 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain FerA PF08165.11 CCF74831.1 - 0.012 15.5 0.2 3 7.9 0.0 2.4 2 0 0 2 2 2 0 FerA (NUC095) domain FEZ PF07763.13 CCF74831.1 - 0.026 14.3 1.2 0.064 13.0 1.1 1.5 1 1 0 1 1 1 0 FEZ-like protein Fur_reg_FbpB PF13040.6 CCF74831.1 - 0.096 12.3 0.5 0.096 12.3 0.5 2.1 3 0 0 3 3 3 0 Fur-regulated basic protein B ANAPC4_WD40 PF12894.7 CCF74832.1 - 1.3e-05 25.4 0.0 0.82 10.0 0.0 4.4 4 1 0 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF74832.1 - 0.007 17.2 4.7 2e+02 3.1 0.0 6.7 7 0 0 7 7 7 0 WD domain, G-beta repeat Atg8 PF02991.16 CCF74833.1 - 4.4e-30 103.9 0.1 7.9e-30 103.1 0.1 1.4 1 1 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like tRNA_Me_trans PF03054.16 CCF74834.1 - 1.6e-93 313.4 0.0 2.8e-87 292.8 0.0 2.1 1 1 1 2 2 2 2 tRNA methyl transferase ThiI PF02568.14 CCF74834.1 - 7.1e-05 22.5 0.0 0.00011 21.8 0.0 1.3 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 CCF74834.1 - 0.0011 18.5 0.0 0.0026 17.3 0.0 1.6 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC Asn_synthase PF00733.21 CCF74834.1 - 0.0025 17.5 0.0 0.0068 16.1 0.0 1.6 2 0 0 2 2 2 1 Asparagine synthase SufE PF02657.15 CCF74834.1 - 0.023 14.5 0.0 0.055 13.3 0.0 1.6 1 0 0 1 1 1 0 Fe-S metabolism associated domain NAD_synthase PF02540.17 CCF74834.1 - 0.18 10.9 0.0 0.31 10.1 0.0 1.3 1 0 0 1 1 1 0 NAD synthase Helicase_C_2 PF13307.6 CCF74835.1 - 2.3e-30 106.0 0.0 4.3e-30 105.1 0.0 1.5 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 CCF74835.1 - 3e-23 82.3 2.4 2.8e-12 46.6 2.1 3.8 2 1 0 2 2 2 2 DEAD_2 DEAD PF00270.29 CCF74835.1 - 7.2e-06 25.9 0.0 0.00018 21.4 0.0 2.6 3 0 0 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 CCF74835.1 - 0.00016 21.7 0.0 0.031 14.3 0.0 2.5 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 CCF74835.1 - 0.04 14.2 0.1 9 6.6 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 CCF74835.1 - 0.082 12.6 0.1 0.33 10.6 0.0 1.9 2 0 0 2 2 2 0 AAA domain Thioredoxin PF00085.20 CCF74837.1 - 1e-07 31.8 0.0 0.0038 17.2 0.0 3.4 3 0 0 3 3 3 2 Thioredoxin Thioredoxin_6 PF13848.6 CCF74837.1 - 1.2e-07 31.9 6.3 9.1e-05 22.4 1.3 3.0 2 1 0 2 2 2 2 Thioredoxin-like domain Thioredoxin_2 PF13098.6 CCF74837.1 - 4.3e-05 23.9 0.0 0.4 11.2 0.0 2.8 2 1 0 2 2 2 2 Thioredoxin-like domain Thioredoxin_8 PF13905.6 CCF74837.1 - 8.8e-05 22.8 1.8 0.41 11.0 0.0 3.1 3 0 0 3 3 3 2 Thioredoxin-like HyaE PF07449.11 CCF74837.1 - 0.0079 16.1 0.0 1.7 8.6 0.0 2.5 2 0 0 2 2 2 2 Hydrogenase-1 expression protein HyaE SHS2_Rpb7-N PF03876.17 CCF74839.1 - 9.4e-13 48.3 0.0 1.4e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 RNA_pol_Rbc25 PF08292.12 CCF74839.1 - 3.6e-08 33.7 0.0 5.5e-08 33.1 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase III subunit Rpc25 Peptidase_C3 PF00548.20 CCF74839.1 - 0.016 15.1 0.0 0.028 14.3 0.0 1.3 1 0 0 1 1 1 0 3C cysteine protease (picornain 3C) Nop53 PF07767.11 CCF74840.1 - 1.9e-19 70.4 11.9 3.4e-19 69.5 11.9 1.3 1 1 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) YdiH PF15930.5 CCF74840.1 - 0.15 12.2 0.1 0.33 11.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function FlgN PF05130.12 CCF74840.1 - 5.6 7.5 9.1 0.17 12.4 0.7 2.4 3 0 0 3 3 3 0 FlgN protein Ribosomal_S9 PF00380.19 CCF74841.1 - 8.5e-29 100.5 0.0 1.5e-28 99.7 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S9/S16 SPACA7 PF15307.6 CCF74841.1 - 0.0094 16.2 0.8 0.018 15.3 0.8 1.4 1 0 0 1 1 1 1 Sperm acrosome-associated protein 7 MAGE PF01454.19 CCF74841.1 - 0.047 13.4 0.0 0.12 12.0 0.0 1.7 1 0 0 1 1 1 0 MAGE family RRM_1 PF00076.22 CCF74842.1 - 6e-24 83.6 0.1 1.4e-15 56.9 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 CCF74842.1 - 3.7e-07 30.1 0.1 7.3e-07 29.2 0.1 1.5 1 0 0 1 1 1 1 WW domain RNA_bind PF08675.11 CCF74842.1 - 0.00063 19.7 0.1 1.1 9.3 0.0 2.5 2 0 0 2 2 2 2 RNA binding domain RRM_5 PF13893.6 CCF74842.1 - 0.057 13.0 0.0 0.26 10.9 0.0 1.9 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHM7_cyt PF14703.6 CCF74842.1 - 0.058 13.6 0.0 0.89 9.8 0.0 2.2 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter Nup35_RRM_2 PF14605.6 CCF74842.1 - 0.098 12.7 0.0 0.56 10.3 0.0 2.2 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif MA3 PF02847.17 CCF74843.1 - 1.6e-17 63.5 3.8 3.8e-17 62.3 2.7 2.2 2 0 0 2 2 2 1 MA3 domain CNOT1_CAF1_bind PF16415.5 CCF74843.1 - 0.0013 18.2 0.0 0.054 12.9 0.0 2.6 1 1 1 2 2 2 1 CCR4-NOT transcription complex subunit 1 CAF1-binding domain DUF3693 PF12472.8 CCF74843.1 - 0.15 11.7 0.0 0.44 10.2 0.0 1.7 1 0 0 1 1 1 0 Phage related protein Thr_synth_N PF14821.6 CCF74843.1 - 0.17 12.1 0.0 0.72 10.1 0.0 2.1 2 0 0 2 2 2 0 Threonine synthase N terminus Ribosomal_S8 PF00410.19 CCF74844.1 - 2e-17 63.3 0.0 2.3e-17 63.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Ras PF00071.22 CCF74846.1 - 2.7e-59 199.4 0.1 3.3e-59 199.1 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF74846.1 - 2.8e-35 121.1 0.5 4.4e-35 120.5 0.0 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF74846.1 - 3e-13 49.6 0.0 4.2e-13 49.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 CCF74846.1 - 5.2e-07 29.7 0.2 9.4e-07 28.9 0.0 1.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF74846.1 - 2e-05 24.1 0.0 2.6e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 CCF74846.1 - 0.00012 21.6 0.1 0.017 14.5 0.0 2.1 2 0 0 2 2 2 2 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 CCF74846.1 - 0.00051 19.6 0.0 0.0038 16.8 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 CCF74846.1 - 0.021 14.4 0.8 0.11 12.0 0.1 2.3 2 1 1 3 3 3 0 Ferrous iron transport protein B RsgA_GTPase PF03193.16 CCF74846.1 - 0.063 13.2 0.0 1.1 9.2 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase TniB PF05621.11 CCF74846.1 - 0.085 12.3 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Bacterial TniB protein Cyclin_N PF00134.23 CCF74847.1 - 3.8e-09 36.3 0.2 9.5e-09 35.1 0.0 1.7 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 CCF74847.1 - 0.032 14.3 0.2 0.15 12.2 0.1 2.2 2 0 0 2 2 2 0 Cyclin, C-terminal domain zf-RING_2 PF13639.6 CCF74849.1 - 4.4e-10 39.7 15.3 4.4e-10 39.7 15.3 2.4 2 0 0 2 2 1 1 Ring finger domain zinc_ribbon_9 PF14369.6 CCF74849.1 - 5.1e-06 26.6 3.2 5.1e-06 26.6 3.2 3.5 4 0 0 4 4 4 1 zinc-ribbon zf-rbx1 PF12678.7 CCF74849.1 - 1.6e-05 25.1 16.8 1.6e-05 25.1 16.8 2.7 2 2 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 CCF74849.1 - 3.3e-05 23.6 13.9 3.3e-05 23.6 13.9 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 CCF74849.1 - 0.0018 18.0 13.6 0.0018 18.0 13.6 2.4 2 0 0 2 2 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 CCF74849.1 - 0.0025 17.8 8.2 0.0076 16.3 8.2 1.8 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Rad50_zn_hook PF04423.14 CCF74849.1 - 0.13 12.1 0.1 0.13 12.1 0.1 1.9 2 0 0 2 2 2 0 Rad50 zinc hook motif FANCL_C PF11793.8 CCF74849.1 - 0.71 10.1 16.4 0.083 13.1 11.4 2.1 2 1 0 2 2 2 0 FANCL C-terminal domain CTU2 PF10288.9 CCF74849.1 - 2.2 8.6 11.2 18 5.6 7.1 3.3 2 1 0 2 2 2 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-RING_UBOX PF13445.6 CCF74849.1 - 2.4 8.3 16.4 0.067 13.2 8.6 2.5 2 1 1 3 3 3 0 RING-type zinc-finger Prok-RING_4 PF14447.6 CCF74849.1 - 6 6.8 17.2 12 5.8 14.0 2.9 2 1 1 3 3 3 0 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 CCF74849.1 - 6.3 6.7 23.4 0.25 11.3 15.8 2.5 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) UTP25 PF06862.12 CCF74850.1 - 4.5e-103 345.6 9.6 4.5e-103 345.6 9.6 2.0 2 0 0 2 2 2 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 WYL_3 PF18488.1 CCF74850.1 - 0.068 13.5 0.2 0.83 10.1 0.2 2.5 2 0 0 2 2 2 0 WYL domain tRNA-synt_1g PF09334.11 CCF74851.1 - 9.5e-48 162.9 5.1 1.8e-40 138.9 0.8 2.2 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 CCF74851.1 - 3.4e-08 32.2 0.3 0.0057 15.0 0.0 3.1 2 1 1 3 3 3 3 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 CCF74851.1 - 0.00065 19.7 0.6 0.0015 18.5 0.2 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 CCF74851.1 - 0.015 14.6 2.7 0.047 13.0 0.0 2.4 3 0 0 3 3 3 0 tRNA synthetases class I (C) catalytic domain Mito_carr PF00153.27 CCF74854.1 - 2.4e-19 69.0 2.5 3.9e-09 36.3 0.3 2.5 2 0 0 2 2 2 2 Mitochondrial carrier protein VPS13_C PF16909.5 CCF74855.1 - 0.034 13.9 0.4 0.047 13.5 0.4 1.2 1 0 0 1 1 1 0 Vacuolar-sorting-associated 13 protein C-terminal GldM_N PF12081.8 CCF74855.1 - 0.091 12.9 2.6 0.23 11.5 0.5 2.0 1 1 1 2 2 2 0 GldM N-terminal domain DWNN PF08783.11 CCF74855.1 - 0.099 12.9 0.5 13 6.1 0.0 2.3 2 0 0 2 2 2 0 DWNN domain RRM_1 PF00076.22 CCF74856.1 - 1.2e-28 98.7 0.1 5.6e-16 58.1 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF74856.1 - 0.00042 20.4 0.0 0.0011 19.1 0.0 1.8 1 0 0 1 1 1 1 RNA recognition motif RRM_occluded PF16842.5 CCF74856.1 - 0.00076 19.3 0.0 0.21 11.5 0.0 2.2 2 0 0 2 2 2 2 Occluded RNA-recognition motif Limkain-b1 PF11608.8 CCF74856.1 - 0.0014 18.6 0.0 0.021 14.9 0.0 2.3 2 0 0 2 2 2 1 Limkain b1 RRM_3 PF08777.11 CCF74856.1 - 0.0019 18.2 0.2 0.065 13.3 0.1 2.2 2 0 0 2 2 2 1 RNA binding motif Nup35_RRM_2 PF14605.6 CCF74856.1 - 0.011 15.8 0.1 0.14 12.2 0.0 2.3 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif DnaJ PF00226.31 CCF74857.1 - 5.7e-22 77.6 1.9 1.6e-21 76.2 0.2 2.7 3 1 0 3 3 3 1 DnaJ domain zf-met PF12874.7 CCF74857.1 - 1.6e-09 37.8 2.0 4.8e-09 36.3 2.0 1.9 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 CCF74857.1 - 2.8e-09 37.0 4.3 9.4e-09 35.3 4.3 2.0 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding zf-C2H2_2 PF12756.7 CCF74857.1 - 0.002 18.4 3.4 0.002 18.4 3.4 2.8 2 1 1 3 3 3 1 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 CCF74857.1 - 0.011 15.8 1.6 0.055 13.5 0.5 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2_4 PF13894.6 CCF74857.1 - 0.016 16.0 0.9 0.079 13.8 0.3 2.6 2 0 0 2 2 2 0 C2H2-type zinc finger RPT PF13446.6 CCF74857.1 - 0.049 13.6 0.0 1 9.3 0.0 2.5 2 0 0 2 2 2 0 A repeated domain in UCH-protein zf-C2H2 PF00096.26 CCF74857.1 - 0.061 13.8 1.0 0.061 13.8 1.0 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type Peptidase_C97 PF05903.14 CCF74858.1 - 3.5e-27 95.1 0.1 5.4e-27 94.5 0.1 1.3 1 0 0 1 1 1 1 PPPDE putative peptidase domain LRAT PF04970.13 CCF74858.1 - 0.064 13.6 0.0 0.23 11.8 0.0 1.9 2 0 0 2 2 2 0 Lecithin retinol acyltransferase RRM_1 PF00076.22 CCF74859.1 - 8.3e-37 124.8 0.0 1.1e-18 66.9 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 CCF74859.1 - 2.1e-05 24.5 0.1 0.017 15.2 0.0 2.4 2 0 0 2 2 2 2 RNA binding motif RRM_5 PF13893.6 CCF74859.1 - 0.00099 18.7 0.0 0.088 12.4 0.0 2.1 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 CCF74859.1 - 0.0037 17.3 0.2 1.9 8.6 0.0 2.4 2 1 0 2 2 2 2 Limkain b1 Auto_anti-p27 PF06677.12 CCF74860.1 - 3.1e-16 59.2 4.4 5.4e-16 58.5 4.4 1.4 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) RPA_interact_C PF14768.6 CCF74860.1 - 0.00057 20.4 0.4 0.00086 19.8 0.4 1.3 1 0 0 1 1 1 1 Replication protein A interacting C-terminal zf-RRPl_C4 PF17026.5 CCF74860.1 - 0.00096 19.2 0.2 0.0013 18.8 0.2 1.3 1 0 0 1 1 1 1 Putative ribonucleoprotein zinc-finger pf C4 type zf-U1 PF06220.12 CCF74860.1 - 0.0038 17.0 0.7 0.0067 16.2 0.7 1.4 1 0 0 1 1 1 1 U1 zinc finger Ribosomal_S27 PF01599.19 CCF74860.1 - 0.093 12.9 1.0 0.17 12.0 1.0 1.4 1 0 0 1 1 1 0 Ribosomal protein S27a Thioredoxin PF00085.20 CCF74861.1 - 8.1e-09 35.4 0.0 1.3e-08 34.7 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin Phosducin PF02114.16 CCF74861.1 - 3.5e-06 26.2 0.3 4.4e-06 25.8 0.3 1.1 1 0 0 1 1 1 1 Phosducin Endonuc-MspI PF09208.10 CCF74861.1 - 0.046 13.1 0.2 0.062 12.7 0.2 1.1 1 0 0 1 1 1 0 Restriction endonuclease MspI tRNA_m1G_MT PF01746.21 CCF74862.1 - 4.5e-19 68.9 0.0 5.9e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase Chlorophyllase PF07224.11 CCF74862.1 - 0.11 11.5 0.0 0.15 11.0 0.0 1.1 1 0 0 1 1 1 0 Chlorophyllase Peptidase_M24 PF00557.24 CCF74863.1 - 5.3e-49 166.7 0.1 6.5e-49 166.5 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-C6H2 PF15801.5 CCF74863.1 - 4e-09 36.6 11.0 8.3e-09 35.6 11.0 1.5 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding RecR PF02132.15 CCF74863.1 - 0.23 11.0 2.7 0.53 9.9 1.5 2.2 2 0 0 2 2 2 0 RecR protein zf-MYND PF01753.18 CCF74863.1 - 1.7 8.8 11.9 0.073 13.2 6.1 1.7 2 0 0 2 2 2 0 MYND finger RMI1_N PF08585.12 CCF74864.1 - 3.2e-13 49.9 0.3 7.6e-11 42.2 0.2 2.4 1 1 1 2 2 2 2 RecQ mediated genome instability protein NTP_transf_2 PF01909.23 CCF74865.1 - 8.9e-06 25.9 0.0 1.7e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 CCF74865.1 - 0.022 15.0 0.2 0.066 13.4 0.2 1.9 1 0 0 1 1 1 0 Cid1 family poly A polymerase Polbeta PF18765.1 CCF74865.1 - 0.088 12.9 0.0 0.24 11.5 0.0 1.7 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase ABC_membrane_2 PF06472.15 CCF74865.1 - 0.1 12.0 0.4 0.16 11.4 0.4 1.3 1 0 0 1 1 1 0 ABC transporter transmembrane region 2 Cpn60_TCP1 PF00118.24 CCF74866.1 - 2.2e-89 300.4 15.6 3.8e-89 299.6 15.6 1.3 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family GIT_CC PF16559.5 CCF74866.1 - 0.12 12.2 0.0 0.41 10.5 0.0 1.9 1 0 0 1 1 1 0 GIT coiled-coil Rho guanine nucleotide exchange factor Ribosomal_L22e PF01776.17 CCF74868.1 - 0.011 16.1 0.2 0.042 14.2 0.1 2.0 2 0 0 2 2 2 0 Ribosomal L22e protein family Ribosomal_S5 PF00333.20 CCF74869.1 - 8.2e-11 41.7 0.3 1.3e-10 41.0 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 CCF74869.1 - 1.6e-09 37.1 0.0 2.8e-09 36.3 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain Imm5 PF14423.6 CCF74870.1 - 0.088 13.0 0.0 0.11 12.7 0.0 1.2 1 0 0 1 1 1 0 Immunity protein Imm5 Histone PF00125.24 CCF74872.1 - 1.7e-18 67.2 1.5 2.1e-18 67.0 1.5 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 CCF74872.1 - 0.00014 22.1 1.0 0.00025 21.3 0.1 1.8 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 CCF74872.1 - 0.0031 18.0 0.0 0.0047 17.4 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A PHD PF00628.29 CCF74873.1 - 7.3e-11 41.8 5.2 7.3e-11 41.8 5.2 2.4 2 0 0 2 2 2 1 PHD-finger zf-RING_2 PF13639.6 CCF74873.1 - 1.8e-08 34.6 6.5 1.8e-08 34.6 6.5 2.4 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_3 PF13920.6 CCF74873.1 - 1.7e-05 24.6 5.2 1.7e-05 24.6 5.2 2.8 3 1 0 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF74873.1 - 1.8e-05 24.5 6.4 1.8e-05 24.5 6.4 2.8 2 1 1 3 3 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF74873.1 - 2.9e-05 23.8 7.3 2.9e-05 23.8 7.3 3.0 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 CCF74873.1 - 6.3e-05 23.2 16.5 0.00011 22.4 8.1 2.7 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 CCF74873.1 - 7.3e-05 22.6 4.9 7.3e-05 22.6 4.9 2.5 3 1 0 3 3 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 CCF74873.1 - 9.1e-05 22.2 6.0 9.1e-05 22.2 6.0 2.5 2 1 1 3 3 2 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 CCF74873.1 - 0.0041 17.1 1.7 0.0041 17.1 1.7 3.1 2 2 1 3 3 2 1 RING-type zinc-finger C1_2 PF03107.16 CCF74873.1 - 0.013 15.9 0.8 0.013 15.9 0.8 3.1 4 0 0 4 4 4 0 C1 domain zf-C3HC4_4 PF15227.6 CCF74873.1 - 0.029 14.5 4.6 0.029 14.5 4.6 2.8 3 1 0 3 3 2 0 zinc finger of C3HC4-type, RING FYVE_2 PF02318.16 CCF74873.1 - 0.23 11.7 4.4 5.1 7.3 0.5 2.6 2 0 0 2 2 2 0 FYVE-type zinc finger zf-RING_10 PF16685.5 CCF74873.1 - 0.43 10.8 8.3 0.95 9.7 1.9 3.2 3 0 0 3 3 3 0 zinc RING finger of MSL2 zf-P11 PF03854.14 CCF74873.1 - 0.55 9.9 5.7 0.13 12.0 1.6 2.1 2 0 0 2 2 2 0 P-11 zinc finger zf-HC5HC2H PF13771.6 CCF74873.1 - 1 9.7 5.2 0.97 9.7 0.1 2.9 2 1 1 3 3 3 0 PHD-like zinc-binding domain zf-ANAPC11 PF12861.7 CCF74873.1 - 4.2 7.5 13.2 0.13 12.3 1.2 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-UDP PF14569.6 CCF74873.1 - 8.3 6.6 10.2 0.88 9.7 2.2 2.4 2 0 0 2 2 2 0 Zinc-binding RING-finger PHD PF00628.29 CCF74875.1 - 0.00037 20.3 1.3 0.0072 16.2 0.2 2.8 2 0 0 2 2 2 1 PHD-finger DUF2340 PF10209.9 CCF74875.1 - 0.13 12.7 1.6 21 5.6 0.0 3.5 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2340) ABC_tran PF00005.27 CCF74876.1 - 1.7e-34 119.3 0.0 3.4e-34 118.3 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 CCF74876.1 - 9.1e-33 114.1 9.3 1.4e-32 113.5 9.3 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 CCF74876.1 - 6.9e-08 32.2 0.4 3.1e-05 23.5 0.0 2.8 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 CCF74876.1 - 0.00017 21.9 0.3 0.014 15.7 0.0 2.8 3 0 0 3 3 3 1 AAA domain AAA_15 PF13175.6 CCF74876.1 - 0.00018 21.4 0.5 0.00041 20.2 0.5 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 CCF74876.1 - 0.0045 17.4 0.2 0.046 14.2 0.2 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) PRK PF00485.18 CCF74876.1 - 0.022 14.5 0.0 0.037 13.8 0.0 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family AAA_23 PF13476.6 CCF74876.1 - 0.027 15.0 0.3 0.16 12.5 0.2 2.2 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 CCF74876.1 - 0.058 13.5 0.0 0.12 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 CCF74876.1 - 0.089 13.2 0.0 0.21 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 CCF74876.1 - 0.092 12.6 0.0 0.2 11.5 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Mon1 PF03164.14 CCF74877.1 - 1.6e-46 159.2 0.4 2.2e-24 86.3 0.1 2.1 1 1 1 2 2 2 2 Trafficking protein Mon1 RNase_T PF00929.24 CCF74878.1 - 3.7e-12 47.1 0.0 1.1e-11 45.6 0.0 1.8 1 0 0 1 1 1 1 Exonuclease UCH_1 PF13423.6 CCF74878.1 - 9e-09 35.4 5.1 2e-08 34.2 5.1 1.5 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase ELFV_dehydrog PF00208.21 CCF74879.1 - 2.5e-79 266.4 0.9 3.4e-79 266.0 0.9 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 CCF74879.1 - 8.9e-51 171.2 0.0 1.9e-50 170.1 0.0 1.6 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain R_equi_Vir PF05526.11 CCF74879.1 - 0.029 14.2 0.2 0.053 13.4 0.2 1.3 1 0 0 1 1 1 0 Rhodococcus equi virulence-associated protein Prefoldin PF02996.17 CCF74879.1 - 0.22 11.4 0.6 12 5.8 0.0 2.3 2 0 0 2 2 2 0 Prefoldin subunit CBP_BcsQ PF06564.12 CCF74880.1 - 0.02 14.4 0.0 0.037 13.5 0.0 1.4 1 0 0 1 1 1 0 Cellulose biosynthesis protein BcsQ Adaptin_N PF01602.20 CCF74881.1 - 2.3e-47 161.8 16.1 2.3e-47 161.8 16.1 1.4 2 0 0 2 2 2 1 Adaptin N terminal region Coatomer_b_Cpla PF14806.6 CCF74881.1 - 3e-34 117.7 0.2 1.2e-33 115.8 0.2 2.1 1 1 0 1 1 1 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 CCF74881.1 - 2.3e-24 85.9 0.3 4.4e-24 85.0 0.3 1.5 1 0 0 1 1 1 1 Coatomer beta C-terminal region Cnd1 PF12717.7 CCF74881.1 - 4.8e-11 43.0 2.1 7.7e-08 32.5 0.1 2.9 2 0 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 CCF74881.1 - 9.3e-07 29.2 0.0 2.4e-06 27.9 0.0 1.7 1 0 0 1 1 1 1 HEAT repeats HEAT PF02985.22 CCF74881.1 - 0.00021 21.3 0.3 0.019 15.2 0.0 3.7 4 0 0 4 4 4 1 HEAT repeat RTP1_C1 PF10363.9 CCF74881.1 - 0.058 13.6 0.2 0.32 11.2 0.0 2.4 3 0 0 3 3 3 0 Required for nuclear transport of RNA pol II C-terminus 1 MSC PF09402.10 CCF74882.1 - 0.11 11.9 0.4 0.17 11.3 0.2 1.3 1 1 0 1 1 1 0 Man1-Src1p-C-terminal domain Ribosomal_L27A PF00828.19 CCF74883.1 - 3.2e-12 47.2 0.0 5.5e-12 46.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A zf-CCCH_2 PF14608.6 CCF74883.1 - 0.29 11.7 1.3 0.64 10.6 1.3 1.6 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger Diphthamide_syn PF01866.17 CCF74884.1 - 5e-42 144.4 4.0 6.4e-42 144.0 4.0 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein zf-CCCH_3 PF15663.5 CCF74884.1 - 0.026 14.7 2.4 0.051 13.8 2.4 1.5 1 0 0 1 1 1 0 Zinc-finger containing family Focadhesin PF11229.8 CCF74884.1 - 0.045 12.0 0.1 0.069 11.4 0.1 1.2 1 0 0 1 1 1 0 Focadhesin CPW_WPC PF09717.10 CCF74885.1 - 4.2e-29 101.3 21.4 2.6e-11 44.3 3.9 3.2 3 0 0 3 3 3 3 Plasmodium falciparum domain of unknown function (CPW_WPC) NPCBM_assoc PF10633.9 CCF74885.1 - 0.00094 19.4 0.1 0.67 10.2 0.0 2.9 2 1 1 3 3 3 2 NPCBM-associated, NEW3 domain of alpha-galactosidase DUF4215 PF13948.6 CCF74885.1 - 7.1 7.2 8.8 6.3 7.3 0.3 3.0 2 1 0 2 2 2 0 Domain of unknown function (DUF4215) Chitin_bind_1 PF00187.19 CCF74885.1 - 9.9 6.7 9.2 0.43 11.1 1.4 2.7 2 1 1 3 3 3 0 Chitin recognition protein COX2 PF00116.20 CCF74886.1 - 6.4e-44 148.7 0.0 8e-44 148.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Ribosomal_L17 PF01196.19 CCF74887.1 - 8.1e-20 71.5 0.1 1.8e-19 70.4 0.1 1.6 1 0 0 1 1 1 1 Ribosomal protein L17 DUF4159 PF13709.6 CCF74887.1 - 0.079 12.4 0.0 0.16 11.3 0.0 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4159) DUF4108 PF13390.6 CCF74887.1 - 0.1 12.6 0.4 0.19 11.7 0.4 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4108) OB_RNB PF08206.11 CCF74887.1 - 0.15 11.7 0.0 0.26 11.0 0.0 1.4 1 0 0 1 1 1 0 Ribonuclease B OB domain MMR_HSR1 PF01926.23 CCF74888.1 - 3.4e-16 59.3 0.2 1.7e-14 53.8 0.0 2.5 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF74888.1 - 1.2e-06 28.2 0.0 7.8e-05 22.2 0.1 2.5 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 CCF74888.1 - 6.2e-06 26.2 1.0 0.0052 16.7 0.0 2.8 3 0 0 3 3 3 2 RsgA GTPase Dynamin_N PF00350.23 CCF74888.1 - 0.012 15.6 0.9 0.15 12.1 0.4 2.6 1 1 1 2 2 2 0 Dynamin family AIG1 PF04548.16 CCF74888.1 - 0.036 13.4 0.1 0.086 12.2 0.1 1.6 1 0 0 1 1 1 0 AIG1 family Lipoprotein_10 PF03202.13 CCF74889.1 - 6.6 7.2 8.4 1.3 9.5 3.0 2.2 1 1 1 2 2 2 0 Putative mycoplasma lipoprotein, C-terminal region Pkinase PF00069.25 CCF74890.1 - 3.9e-61 206.7 0.0 6.4e-61 206.0 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74890.1 - 1.4e-26 93.4 0.0 2.6e-26 92.5 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF74890.1 - 2.2e-09 37.1 0.0 3.9e-07 29.7 0.0 3.0 2 1 0 2 2 2 1 Kinase-like Haspin_kinase PF12330.8 CCF74890.1 - 5.4e-05 22.3 0.2 5.4e-05 22.3 0.2 2.3 2 0 0 2 2 2 1 Haspin like kinase domain Kdo PF06293.14 CCF74890.1 - 0.011 15.1 0.1 0.018 14.4 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family ATP-grasp_2 PF08442.10 CCF74891.1 - 1.3e-59 201.2 0.1 2e-59 200.6 0.1 1.3 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 CCF74891.1 - 1.7e-21 76.6 0.9 4.1e-21 75.4 0.9 1.6 1 0 0 1 1 1 1 CoA-ligase ATP-grasp_5 PF13549.6 CCF74891.1 - 1.1e-10 41.3 0.0 2.3e-10 40.3 0.0 1.5 1 0 0 1 1 1 1 ATP-grasp domain SF-assemblin PF06705.11 CCF74892.1 - 4e-06 26.4 22.6 5.3e-06 26.0 22.6 1.1 1 0 0 1 1 1 1 SF-assemblin/beta giardin Tsi6 PF18660.1 CCF74892.1 - 0.077 13.0 2.9 1.1 9.3 0.2 3.0 3 0 0 3 3 3 0 Tsi6 ApoO PF09769.9 CCF74892.1 - 0.083 12.9 2.6 4.7 7.2 0.4 2.5 2 1 0 2 2 2 0 Apolipoprotein O BshC PF10079.9 CCF74892.1 - 0.21 10.3 12.4 0.019 13.8 6.2 1.9 1 1 1 2 2 2 0 Bacillithiol biosynthesis BshC DUF842 PF05811.13 CCF74892.1 - 0.22 11.2 7.8 0.07 12.8 0.9 2.8 1 1 2 3 3 3 0 Eukaryotic protein of unknown function (DUF842) DUF885 PF05960.11 CCF74892.1 - 0.24 11.0 6.7 0.32 10.6 6.7 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF885) YojJ PF10372.9 CCF74892.1 - 0.52 10.4 6.9 0.86 9.7 0.4 3.3 2 1 1 3 3 3 0 Bacterial membrane-spanning protein N-terminus GPW_gp25 PF04965.14 CCF74892.1 - 0.53 10.1 4.8 0.94 9.3 0.1 3.4 2 2 2 4 4 4 0 Gene 25-like lysozyme DUF2379 PF09543.10 CCF74892.1 - 0.62 10.3 4.6 1.8 8.8 0.4 2.8 2 2 1 3 3 3 0 Protein of unknown function (DUF2379) DUF3763 PF12592.8 CCF74892.1 - 0.9 9.6 4.4 13 6.0 0.7 3.7 3 2 1 4 4 4 0 Protein of unknown function (DUF3763) DUF4407 PF14362.6 CCF74892.1 - 2.5 7.4 13.2 3.5 6.9 0.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4407) DUF883 PF05957.13 CCF74892.1 - 3.8 8.2 8.4 8.7 7.0 0.6 3.1 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF1664 PF07889.12 CCF74892.1 - 3.9 7.5 15.2 0.98 9.5 2.1 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF1664) RNase_J_C PF17770.1 CCF74892.1 - 8.1 7.6 9.0 27 5.9 0.5 3.2 2 1 2 4 4 4 0 Ribonuclease J C-terminal domain Ribosomal_L14e PF01929.17 CCF74893.1 - 4.2e-26 91.2 2.1 5.2e-26 90.9 2.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L14 KOW PF00467.29 CCF74893.1 - 0.00048 20.0 0.0 0.0012 18.7 0.0 1.6 2 0 0 2 2 2 1 KOW motif DUF773 PF05600.12 CCF74894.1 - 4.8e-27 94.9 21.3 1.1e-23 83.8 5.4 3.4 3 0 0 3 3 3 2 CDK5 regulatory subunit-associated protein 3 ATG16 PF08614.11 CCF74894.1 - 0.0048 17.2 0.1 0.0048 17.2 0.1 3.6 4 0 0 4 4 4 1 Autophagy protein 16 (ATG16) DUF948 PF06103.11 CCF74894.1 - 0.023 14.9 10.5 1.1 9.6 0.6 5.3 5 1 0 5 5 5 0 Bacterial protein of unknown function (DUF948) HBM PF16591.5 CCF74894.1 - 0.11 11.9 4.5 3 7.2 0.0 4.0 4 0 0 4 4 4 0 Helical bimodular sensor domain DUF3450 PF11932.8 CCF74894.1 - 0.18 11.1 6.1 1 8.6 0.1 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3450) TF_AP-2 PF03299.14 CCF74894.1 - 0.23 11.4 7.4 2 8.4 0.0 4.5 4 1 0 4 4 4 0 Transcription factor AP-2 DUF4140 PF13600.6 CCF74894.1 - 0.33 11.4 2.2 1.2 9.7 0.1 2.8 3 0 0 3 3 2 0 N-terminal domain of unknown function (DUF4140) Snapin_Pallidin PF14712.6 CCF74894.1 - 0.39 11.2 9.7 0.26 11.7 0.2 3.8 4 0 0 4 4 3 0 Snapin/Pallidin DUF4407 PF14362.6 CCF74894.1 - 0.81 9.0 4.5 3.1 7.1 0.1 3.2 3 1 0 3 3 3 0 Domain of unknown function (DUF4407) DASH_Dam1 PF08653.10 CCF74894.1 - 0.86 9.5 0.0 0.86 9.5 0.0 3.8 5 0 0 5 5 5 0 DASH complex subunit Dam1 TMF_TATA_bd PF12325.8 CCF74894.1 - 1 9.6 8.2 5.5 7.2 0.6 3.4 3 0 0 3 3 3 0 TATA element modulatory factor 1 TATA binding DUF1664 PF07889.12 CCF74894.1 - 1.1 9.3 12.6 0.24 11.5 0.2 4.7 5 1 0 5 5 4 0 Protein of unknown function (DUF1664) TolA_bind_tri PF16331.5 CCF74894.1 - 1.5 9.0 5.3 10 6.3 0.1 3.2 3 0 0 3 3 3 0 TolA binding protein trimerisation Med9 PF07544.13 CCF74894.1 - 1.7 8.8 7.6 2 8.5 0.1 4.3 3 1 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 Spectrin PF00435.21 CCF74894.1 - 4.2 7.9 9.8 2.9 8.4 0.1 3.7 4 0 0 4 4 3 0 Spectrin repeat HIP1_clath_bdg PF16515.5 CCF74894.1 - 6.7 7.4 9.9 6.3 7.5 0.1 4.4 5 1 0 5 5 5 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Noelin-1 PF12308.8 CCF74894.1 - 7.1 6.7 8.4 3.6 7.6 0.3 3.8 4 0 0 4 4 3 0 Neurogenesis glycoprotein Cnn_1N PF07989.11 CCF74894.1 - 7.6 6.8 9.2 4.5 7.5 0.2 3.4 3 0 0 3 3 3 0 Centrosomin N-terminal motif 1 TMF_DNA_bd PF12329.8 CCF74894.1 - 7.7 6.6 14.1 6.6 6.8 0.5 4.4 4 0 0 4 4 4 0 TATA element modulatory factor 1 DNA binding Nop10p PF04135.12 CCF74895.1 - 3.4e-21 75.0 0.1 3.7e-21 74.9 0.1 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Rtf2 PF04641.12 CCF74896.1 - 7.2e-48 163.2 0.4 1.1e-47 162.6 0.4 1.2 1 0 0 1 1 1 1 Rtf2 RING-finger zf-Nse PF11789.8 CCF74896.1 - 0.00039 20.2 2.1 0.013 15.3 0.6 2.4 1 1 1 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_UBOX PF13445.6 CCF74896.1 - 0.0047 16.9 0.1 0.0047 16.9 0.1 1.7 2 0 0 2 2 2 1 RING-type zinc-finger Zn_ribbon_SprT PF17283.2 CCF74896.1 - 0.01 15.7 0.3 0.044 13.7 0.1 2.3 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-RING_2 PF13639.6 CCF74896.1 - 0.027 14.8 0.6 0.056 13.8 0.6 1.6 1 0 0 1 1 1 0 Ring finger domain PriA_CRR PF18319.1 CCF74896.1 - 0.069 13.2 0.3 0.14 12.1 0.3 1.6 1 0 0 1 1 1 0 PriA DNA helicase Cys-rich region (CRR) domain zf-NOSIP PF15906.5 CCF74896.1 - 0.085 13.0 0.2 0.48 10.6 0.0 2.3 3 0 0 3 3 3 0 Zinc-finger of nitric oxide synthase-interacting protein zf-C3HC4_3 PF13920.6 CCF74896.1 - 0.33 10.8 2.4 0.6 10.0 1.4 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-HC5HC2H_2 PF13832.6 CCF74897.1 - 7.2e-20 71.2 43.8 8.9e-12 45.2 1.3 5.9 3 2 1 5 5 5 2 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 CCF74897.1 - 2.2e-13 50.2 48.5 3.5e-07 30.4 0.2 6.5 4 2 2 6 6 6 2 PHD-like zinc-binding domain PHD PF00628.29 CCF74897.1 - 6e-11 42.1 47.5 2e-06 27.6 7.6 5.4 5 0 0 5 5 5 4 PHD-finger PHD_2 PF13831.6 CCF74897.1 - 1.6e-06 27.6 15.7 7e-05 22.3 5.6 4.9 5 0 0 5 5 5 2 PHD-finger C1_1 PF00130.22 CCF74897.1 - 0.00018 21.3 13.0 0.00075 19.3 3.3 5.6 6 0 0 6 6 6 2 Phorbol esters/diacylglycerol binding domain (C1 domain) FYVE_2 PF02318.16 CCF74897.1 - 0.00033 20.9 13.2 0.019 15.2 0.8 3.9 3 0 0 3 3 3 2 FYVE-type zinc finger zf-RING-like PF08746.11 CCF74897.1 - 0.14 12.5 36.1 0.022 15.1 4.6 5.6 4 0 0 4 4 4 0 RING-like domain C1_2 PF03107.16 CCF74897.1 - 5.3 7.4 46.2 0.21 11.9 0.2 6.8 6 1 0 6 6 6 0 C1 domain Ribonuc_red_sm PF00268.21 CCF74898.1 - 6.3e-107 357.2 0.1 7.4e-107 357.0 0.1 1.0 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain TraD_N PF12615.8 CCF74898.1 - 0.011 16.5 0.1 1.4 9.7 0.3 2.6 1 1 1 2 2 2 0 F sex factor protein N terminal MutS_V PF00488.21 CCF74899.1 - 9.8e-23 81.1 0.0 1.9e-22 80.2 0.0 1.4 1 0 0 1 1 1 1 MutS domain V MutS_I PF01624.20 CCF74899.1 - 1.7e-09 37.9 0.0 1.4e-08 34.9 0.0 2.6 2 1 0 2 2 2 1 MutS domain I DNA_pol_phi PF04931.13 CCF74899.1 - 0.0062 14.7 0.0 0.0094 14.1 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase phi AAA_23 PF13476.6 CCF74899.1 - 0.021 15.3 0.1 0.05 14.1 0.1 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CCF74899.1 - 0.029 14.1 0.0 0.074 12.8 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain GIY-YIG PF01541.24 CCF74899.1 - 0.041 14.2 0.2 0.14 12.4 0.0 2.0 2 0 0 2 2 2 0 GIY-YIG catalytic domain Sybindin PF04099.12 CCF74900.1 - 6.2e-10 39.2 0.2 7.9e-10 38.8 0.2 1.2 1 0 0 1 1 1 1 Sybindin-like family GTP_EFTU PF00009.27 CCF74901.1 - 7.8e-55 185.4 0.1 1.3e-54 184.7 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 CCF74901.1 - 7.5e-41 139.0 0.6 3.4e-40 136.8 0.1 2.1 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 CCF74901.1 - 1.7e-13 50.7 0.5 6.9e-13 48.8 0.5 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF74901.1 - 2.7e-07 30.6 0.5 3.7e-05 23.8 0.0 2.9 3 0 0 3 3 3 1 50S ribosome-binding GTPase FlpD PF02662.16 CCF74901.1 - 0.0015 18.5 0.0 0.0041 17.1 0.0 1.6 1 0 0 1 1 1 1 Methyl-viologen-reducing hydrogenase, delta subunit NIF3 PF01784.18 CCF74901.1 - 0.062 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 NIF3 (NGG1p interacting factor 3) G-alpha PF00503.20 CCF74901.1 - 0.089 11.9 0.6 0.96 8.5 0.1 2.1 1 1 1 2 2 2 0 G-protein alpha subunit FeoB_N PF02421.18 CCF74901.1 - 0.1 12.1 0.6 0.99 8.9 0.1 2.6 2 1 0 2 2 2 0 Ferrous iron transport protein B ATP_bind_1 PF03029.17 CCF74901.1 - 0.25 11.1 1.9 4.7 6.9 0.1 2.9 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein tRNA-synt_1c PF00749.21 CCF74902.1 - 4.9e-80 268.8 1.0 6.5e-80 268.4 0.0 1.6 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain Pkinase PF00069.25 CCF74903.1 - 1.7e-77 260.4 0.0 2e-77 260.2 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74903.1 - 3.1e-34 118.4 0.0 4e-34 118.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 CCF74903.1 - 0.0015 17.6 0.0 0.015 14.2 0.0 2.0 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 CCF74903.1 - 0.0043 16.4 0.1 0.0091 15.4 0.1 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 CCF74903.1 - 0.0074 15.9 0.0 0.019 14.6 0.0 1.5 1 1 0 1 1 1 1 RIO1 family APH PF01636.23 CCF74903.1 - 0.012 15.5 0.1 0.14 12.1 0.0 2.0 1 1 0 2 2 2 0 Phosphotransferase enzyme family Kinase-like PF14531.6 CCF74903.1 - 0.045 13.1 0.1 0.14 11.5 0.0 1.8 2 1 0 2 2 2 0 Kinase-like Seadorna_VP7 PF07387.11 CCF74903.1 - 0.15 11.1 0.0 0.24 10.4 0.0 1.2 1 0 0 1 1 1 0 Seadornavirus VP7 Pkinase_fungal PF17667.1 CCF74903.1 - 0.16 10.7 0.0 0.23 10.2 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase Cmc1 PF08583.10 CCF74904.1 - 0.035 14.1 0.5 0.049 13.7 0.5 1.2 1 0 0 1 1 1 0 Cytochrome c oxidase biogenesis protein Cmc1 like DnaJ PF00226.31 CCF74905.1 - 9.1e-23 80.2 4.2 1.4e-22 79.5 4.2 1.3 1 0 0 1 1 1 1 DnaJ domain RCC1 PF00415.18 CCF74906.1 - 4.7e-34 116.8 6.8 5.1e-13 49.4 0.2 6.4 7 1 0 7 7 7 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 CCF74906.1 - 2.8e-23 81.1 15.3 1.1e-07 31.5 0.3 6.0 5 0 0 5 5 5 5 Regulator of chromosome condensation (RCC1) repeat Pkinase PF00069.25 CCF74907.1 - 3e-17 62.9 0.0 6.3e-11 42.1 0.0 4.5 3 2 0 3 3 3 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74907.1 - 9.3e-08 31.7 0.0 0.0016 17.8 0.0 3.3 3 0 0 3 3 3 3 Protein tyrosine kinase OmpH PF03938.14 CCF74908.1 - 0.0093 16.3 5.6 0.0093 16.3 5.6 1.9 2 0 0 2 2 2 1 Outer membrane protein (OmpH-like) DUF848 PF05852.11 CCF74908.1 - 0.067 13.3 6.0 0.76 9.9 1.3 2.9 1 1 1 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) Neurensin PF14927.6 CCF74908.1 - 0.072 12.8 1.7 0.56 9.9 0.0 3.0 3 1 1 4 4 4 0 Neurensin Peptidase_M16 PF00675.20 CCF74908.1 - 2.1 8.3 7.5 1.1 9.2 0.1 2.7 3 0 0 3 3 3 0 Insulinase (Peptidase family M16) DUF573 PF04504.14 CCF74908.1 - 3.7 8.3 9.9 1.7 9.4 5.1 2.9 2 1 0 3 3 3 0 Protein of unknown function, DUF573 DUF1664 PF07889.12 CCF74908.1 - 8.3 6.5 7.1 3.2 7.8 3.2 2.5 2 2 0 2 2 2 0 Protein of unknown function (DUF1664) UQ_con PF00179.26 CCF74909.1 - 1e-47 161.3 0.0 1.4e-47 160.9 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UBA PF00627.31 CCF74909.1 - 5.3e-08 32.6 0.0 1.1e-07 31.7 0.0 1.5 1 0 0 1 1 1 1 UBA/TS-N domain Prok-E2_B PF14461.6 CCF74909.1 - 1.5e-05 24.7 0.0 7.3e-05 22.5 0.0 1.9 1 1 0 2 2 2 1 Prokaryotic E2 family B RWD PF05773.22 CCF74909.1 - 0.00023 21.4 0.0 0.00037 20.7 0.0 1.4 1 0 0 1 1 1 1 RWD domain NurA PF09376.10 CCF74909.1 - 0.011 15.4 0.0 0.017 14.8 0.0 1.2 1 0 0 1 1 1 0 NurA domain UBA_4 PF14555.6 CCF74909.1 - 0.061 13.2 0.3 0.18 11.6 0.1 1.8 2 0 0 2 2 2 0 UBA-like domain RecX PF02631.16 CCF74909.1 - 0.065 13.7 0.6 0.11 13.0 0.6 1.3 1 0 0 1 1 1 0 RecX family TAP_C PF03943.13 CCF74909.1 - 0.098 12.3 0.0 0.25 11.0 0.0 1.7 1 0 0 1 1 1 0 TAP C-terminal domain UEV PF05743.13 CCF74909.1 - 0.13 12.1 0.3 0.22 11.4 0.3 1.5 1 1 0 1 1 1 0 UEV domain HBS1_N PF08938.10 CCF74909.1 - 0.15 12.4 1.3 0.17 12.2 0.5 1.6 2 0 0 2 2 2 0 HBS1 N-terminus Tim17 PF02466.19 CCF74910.1 - 2.6e-14 53.5 2.2 3.4e-14 53.1 1.8 1.4 1 1 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family UEV PF05743.13 CCF74911.1 - 4.4e-20 71.7 1.3 1.3e-19 70.3 0.7 2.0 2 0 0 2 2 2 1 UEV domain UQ_con PF00179.26 CCF74911.1 - 3.7e-07 29.9 0.9 8.6e-07 28.7 0.9 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Glutaredoxin PF00462.24 CCF74912.1 - 5.5e-14 52.1 0.0 6.5e-14 51.9 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin Reprolysin_4 PF13583.6 CCF74914.1 - 0.037 13.7 0.3 0.05 13.2 0.3 1.3 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like CLZ PF16526.5 CCF74914.1 - 0.049 14.0 1.0 0.11 12.9 1.0 1.6 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Sas10 PF09368.10 CCF74917.1 - 2.2e-19 69.7 6.9 8.3e-19 67.8 6.9 2.1 1 0 0 1 1 1 1 Sas10 C-terminal domain Sas10_Utp3 PF04000.15 CCF74917.1 - 2.5e-11 44.1 3.9 7.2e-11 42.6 1.0 3.4 2 1 0 2 2 2 1 Sas10/Utp3/C1D family Filamin PF00630.19 CCF74918.1 - 1.2e-17 64.6 0.1 1.5e-09 38.6 0.0 2.5 2 0 0 2 2 2 2 Filamin/ABP280 repeat Invasin_D3 PF09134.10 CCF74918.1 - 0.0043 17.3 0.0 0.01 16.1 0.0 1.6 1 0 0 1 1 1 1 Invasin, domain 3 SAC3 PF12209.8 CCF74918.1 - 0.015 15.4 0.5 0.069 13.3 0.0 2.3 2 0 0 2 2 2 0 Leucine permease transcriptional regulator helical domain VID27_PH PF17747.1 CCF74918.1 - 1.1 9.6 3.6 19 5.6 0.0 3.5 3 0 0 3 3 3 0 VID27 PH-like domain DUF3164 PF11363.8 CCF74921.1 - 0.023 14.3 0.0 0.042 13.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3164) Ank_2 PF12796.7 CCF74922.1 - 7.9e-18 64.8 0.6 6.7e-09 36.2 0.1 2.5 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_5 PF13857.6 CCF74922.1 - 5.8e-12 45.6 0.3 1.5e-11 44.3 0.0 1.9 3 0 0 3 3 3 1 Ankyrin repeats (many copies) Ank PF00023.30 CCF74922.1 - 3.5e-11 43.0 1.7 9.9e-08 32.1 0.1 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 CCF74922.1 - 5.6e-11 42.7 0.2 1.5e-07 31.8 0.0 2.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) ACBP PF00887.19 CCF74922.1 - 2.8e-10 40.3 0.0 5.9e-10 39.2 0.0 1.5 1 0 0 1 1 1 1 Acyl CoA binding protein Ank_3 PF13606.6 CCF74922.1 - 5.9e-08 32.4 0.4 8.8e-06 25.7 0.0 3.0 3 0 0 3 3 3 1 Ankyrin repeat SET PF00856.28 CCF74923.1 - 4.9e-11 43.3 0.0 1.7e-10 41.5 0.0 2.0 2 0 0 2 2 2 1 SET domain Nop PF01798.18 CCF74924.1 - 4.8e-79 265.1 0.6 9.9e-79 264.0 0.6 1.5 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 CCF74924.1 - 2.6e-20 72.6 0.3 1.5e-19 70.1 0.1 2.4 2 0 0 2 2 2 1 NOP5NT (NUC127) domain Peptidase_M16_C PF05193.21 CCF74925.1 - 7.7e-12 45.6 0.1 5.5e-10 39.6 0.0 3.3 3 1 0 3 3 3 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 CCF74925.1 - 3.5e-08 33.6 0.0 1.1e-07 31.9 0.0 1.8 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Spore_YhaL PF14147.6 CCF74925.1 - 5.2 6.8 6.6 12 5.6 6.6 1.6 1 0 0 1 1 1 0 Sporulation protein YhaL MOZ_SAS PF01853.18 CCF74926.1 - 1.5e-66 223.5 2.4 2.4e-66 222.8 2.4 1.2 1 0 0 1 1 1 1 MOZ/SAS family zf-MYST PF17772.1 CCF74926.1 - 2.4e-18 65.5 1.8 3.4e-18 65.0 0.2 2.1 2 0 0 2 2 2 1 MYST family zinc finger domain Tudor-knot PF11717.8 CCF74926.1 - 9.4e-11 41.4 0.1 2.6e-10 40.0 0.1 1.7 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain Acetyltransf_7 PF13508.7 CCF74926.1 - 0.087 13.3 0.0 0.18 12.2 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HSP90 PF00183.18 CCF74928.1 - 4.8e-100 335.9 10.9 6.2e-97 325.6 6.1 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c_3 PF13589.6 CCF74928.1 - 4.1e-07 29.9 0.0 1.1e-06 28.6 0.0 1.7 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 CCF74928.1 - 9.8e-06 26.0 0.1 2.6e-05 24.7 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Hen1_L PF12623.7 CCF74928.1 - 0.026 13.5 0.0 0.046 12.8 0.0 1.3 1 0 0 1 1 1 0 RNA repair, ligase-Pnkp-associating, region of Hen1 Clat_adaptor_s PF01217.20 CCF74929.1 - 1e-50 171.4 2.4 1.2e-50 171.1 2.4 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Cas_St_Csn2 PF16813.5 CCF74929.1 - 0.021 14.0 3.4 0.025 13.7 3.4 1.1 1 0 0 1 1 1 0 CRISPR-associated protein Csn2 subfamily St DNA_mis_repair PF01119.19 CCF74931.1 - 5.4e-21 74.5 0.3 1.2e-20 73.3 0.3 1.6 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain Mlh1_C PF16413.5 CCF74931.1 - 8e-18 64.8 2.6 1.9e-11 43.9 0.0 3.0 2 1 1 3 3 3 2 DNA mismatch repair protein Mlh1 C-terminus HATPase_c_3 PF13589.6 CCF74931.1 - 6.7e-13 48.7 0.0 1.7e-12 47.3 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 CCF74931.1 - 0.00023 21.6 0.7 0.0019 18.7 0.0 2.8 3 1 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MutL_C PF08676.11 CCF74931.1 - 0.028 14.2 0.0 0.074 12.8 0.0 1.7 1 0 0 1 1 1 0 MutL C terminal dimerisation domain Ras PF00071.22 CCF74932.1 - 2.3e-48 163.9 0.0 2.8e-48 163.6 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF74932.1 - 2.2e-30 105.4 0.0 5.4e-30 104.1 0.0 1.6 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF74932.1 - 1.3e-11 44.3 0.0 1.8e-11 43.8 0.0 1.3 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 CCF74932.1 - 4.6e-05 23.5 0.0 7.7e-05 22.8 0.0 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 CCF74932.1 - 0.00075 19.9 0.1 0.0035 17.7 0.1 1.9 1 1 0 1 1 1 1 RNA helicase RsgA_GTPase PF03193.16 CCF74932.1 - 0.0035 17.3 0.0 0.41 10.5 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase Gtr1_RagA PF04670.12 CCF74932.1 - 0.0049 16.3 0.0 0.01 15.2 0.0 1.5 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_16 PF13191.6 CCF74932.1 - 0.0069 16.8 0.0 0.011 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 CCF74932.1 - 0.016 14.7 0.0 0.03 13.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region ArgoMid PF16487.5 CCF74932.1 - 0.031 14.6 0.1 0.068 13.4 0.1 1.6 1 1 0 1 1 1 0 Mid domain of argonaute NB-ARC PF00931.22 CCF74932.1 - 0.054 12.7 0.1 0.085 12.0 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain Septin PF00735.18 CCF74932.1 - 0.12 11.7 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 Septin AAA_22 PF13401.6 CCF74932.1 - 0.15 12.3 0.2 0.49 10.7 0.0 1.9 2 1 1 3 3 3 0 AAA domain FixO PF02433.15 CCF74932.1 - 0.17 11.3 0.0 0.23 10.9 0.0 1.2 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO TsaE PF02367.17 CCF74932.1 - 0.17 11.9 0.1 0.37 10.8 0.1 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 CCF74932.1 - 0.18 11.5 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 CCF74932.1 - 0.23 11.4 0.3 0.64 9.9 0.1 1.8 2 0 0 2 2 2 0 NACHT domain efThoc1 PF11957.8 CCF74933.1 - 0.00032 19.5 0.6 0.00069 18.4 0.0 1.8 2 0 0 2 2 2 1 THO complex subunit 1 transcription elongation factor NTP_transf_2 PF01909.23 CCF74934.1 - 1.1e-05 25.6 0.1 3.5e-05 24.0 0.1 1.9 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF5504 PF17608.2 CCF74935.1 - 0.11 12.5 8.7 0.6 10.2 4.0 2.7 1 1 0 2 2 2 0 Family of unknown function (DUF5504) tRNA-synt_1b PF00579.25 CCF74937.1 - 2.5e-39 135.4 2.2 5.5e-38 130.9 2.2 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (W and Y) S4 PF01479.25 CCF74937.1 - 0.011 15.4 0.0 0.05 13.3 0.0 2.0 2 0 0 2 2 2 0 S4 domain HEPN_STY4199 PF18729.1 CCF74937.1 - 0.13 11.5 0.0 0.29 10.3 0.0 1.5 1 0 0 1 1 1 0 STY4199-like HEPN DUF3273 PF11677.8 CCF74938.1 - 1.2e-96 323.1 15.6 1.4e-96 322.9 15.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3273) Clat_adaptor_s PF01217.20 CCF74940.1 - 2.5e-39 134.4 5.4 2.8e-39 134.3 5.4 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Transket_pyr PF02779.24 CCF74941.1 - 0.041 13.6 0.0 0.072 12.8 0.0 1.3 1 0 0 1 1 1 0 Transketolase, pyrimidine binding domain DEAD PF00270.29 CCF74942.1 - 5.7e-41 140.2 0.1 9.9e-41 139.4 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74942.1 - 5.7e-32 110.4 0.0 2.1e-31 108.5 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74942.1 - 4.5e-05 23.5 0.0 8.9e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 CCF74942.1 - 0.0015 18.3 0.0 0.0024 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 CCF74942.1 - 0.024 14.5 0.0 0.052 13.5 0.0 1.6 1 1 0 1 1 1 0 NACHT domain CMS1 PF14617.6 CCF74942.1 - 0.027 13.8 0.1 0.078 12.3 0.1 1.8 1 1 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit DUF2075 PF09848.9 CCF74942.1 - 0.055 12.7 0.2 0.17 11.1 0.0 1.9 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 CCF74942.1 - 0.059 13.7 0.0 0.13 12.6 0.0 1.7 1 1 0 1 1 1 0 AAA domain DnaB_2 PF07261.11 CCF74943.1 - 0.091 12.5 0.2 0.32 10.7 0.2 2.0 1 0 0 1 1 1 0 Replication initiation and membrane attachment CDT1_C PF16679.5 CCF74945.1 - 0.074 13.5 0.1 0.11 13.0 0.1 1.4 1 1 0 1 1 1 0 DNA replication factor Cdt1 C-terminal domain CAF1C_H4-bd PF12265.8 CCF74946.1 - 3.9e-17 62.2 0.2 1.9e-16 60.1 0.1 2.3 3 0 0 3 3 3 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex WD40 PF00400.32 CCF74946.1 - 4.3e-14 52.7 7.2 0.035 15.0 0.1 5.8 6 0 0 6 6 6 4 WD domain, G-beta repeat Myosin_head PF00063.21 CCF74947.1 - 1.1e-196 655.1 3.0 7.3e-195 649.1 3.0 2.2 1 1 0 1 1 1 1 Myosin head (motor domain) IQ PF00612.27 CCF74947.1 - 4.1e-09 35.4 21.5 0.014 15.2 1.0 4.9 4 0 0 4 4 4 4 IQ calmodulin-binding motif WD40 PF00400.32 CCF74947.1 - 4.1e-05 24.3 0.1 5.7 8.0 0.0 5.8 6 0 0 6 6 5 1 WD domain, G-beta repeat AAA_22 PF13401.6 CCF74947.1 - 0.00033 20.9 0.0 1.2 9.4 0.0 3.5 3 0 0 3 3 3 2 AAA domain KLRAQ PF10205.9 CCF74947.1 - 0.00088 19.5 0.8 0.0024 18.1 0.8 1.7 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein RNA_helicase PF00910.22 CCF74947.1 - 0.0022 18.3 0.1 2.3 8.6 0.0 3.1 2 0 0 2 2 2 1 RNA helicase AAA_16 PF13191.6 CCF74947.1 - 0.0044 17.4 4.3 1.4 9.3 0.0 3.3 3 0 0 3 3 3 2 AAA ATPase domain DUF4686 PF15742.5 CCF74947.1 - 0.0069 15.6 11.2 0.015 14.5 11.2 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4686) AAA_18 PF13238.6 CCF74947.1 - 0.013 16.0 0.0 8.1 7.0 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 CCF74947.1 - 0.019 15.4 0.0 1.4 9.3 0.0 3.2 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) ANAPC4_WD40 PF12894.7 CCF74947.1 - 0.021 15.1 0.0 5.1 7.5 0.0 3.6 4 0 0 4 4 4 0 Anaphase-promoting complex subunit 4 WD40 domain bZIP_1 PF00170.21 CCF74947.1 - 0.062 13.4 4.1 0.19 11.9 4.1 1.9 1 0 0 1 1 1 0 bZIP transcription factor DivIC PF04977.15 CCF74947.1 - 0.069 12.9 5.6 0.054 13.3 3.4 2.0 1 1 0 1 1 1 0 Septum formation initiator NRBF2 PF08961.10 CCF74947.1 - 0.072 12.7 1.9 0.15 11.6 1.9 1.4 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator YabA PF06156.13 CCF74947.1 - 0.11 13.1 0.6 0.43 11.2 0.6 2.0 1 0 0 1 1 1 0 Initiation control protein YabA SlyX PF04102.12 CCF74947.1 - 0.12 13.0 2.2 0.39 11.4 2.2 1.9 1 0 0 1 1 1 0 SlyX bZIP_2 PF07716.15 CCF74947.1 - 0.34 11.0 4.7 0.47 10.6 3.5 1.9 1 1 0 1 1 1 0 Basic region leucine zipper NYD-SP28_assoc PF14775.6 CCF74947.1 - 1.3 9.2 6.6 3.1 8.0 1.2 2.9 2 0 0 2 2 2 0 Sperm tail C-terminal domain Nup54 PF13874.6 CCF74947.1 - 8.5 6.5 14.0 10 6.2 5.2 2.5 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 PI-PLC-X PF00388.19 CCF74948.1 - 1.1e-34 119.1 0.0 1.8e-34 118.4 0.0 1.4 1 0 0 1 1 1 1 Phosphatidylinositol-specific phospholipase C, X domain PI-PLC-Y PF00387.19 CCF74948.1 - 2e-24 86.2 0.0 4.7e-24 85.0 0.0 1.6 1 0 0 1 1 1 1 Phosphatidylinositol-specific phospholipase C, Y domain C2 PF00168.30 CCF74948.1 - 2.2e-05 24.7 0.0 4.4e-05 23.7 0.0 1.5 1 0 0 1 1 1 1 C2 domain Mcp5_PH PF12814.7 CCF74948.1 - 6.8e-05 23.0 1.4 0.00012 22.2 0.2 2.0 2 0 0 2 2 2 1 Meiotic cell cortex C-terminal pleckstrin homology Utp14 PF04615.13 CCF74950.1 - 4.1e-50 171.2 26.0 2.2e-33 115.8 21.0 2.1 1 1 1 2 2 2 2 Utp14 protein DUF4186 PF13811.6 CCF74950.1 - 0.061 13.4 3.3 0.61 10.1 0.5 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4186) Csd3_N PF18059.1 CCF74950.1 - 0.28 11.7 2.1 68 4.1 0.1 3.7 3 0 0 3 3 3 0 Csd3 N-terminal Myb_DNA-binding PF00249.31 CCF74951.1 - 5e-09 36.2 0.0 1.6e-08 34.6 0.0 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF74951.1 - 3.8e-06 27.1 0.0 9.2e-06 25.8 0.0 1.7 1 0 0 1 1 1 1 Myb-like DNA-binding domain Fungal_KA1 PF16797.5 CCF74951.1 - 0.15 11.7 1.6 0.24 11.1 0.2 2.0 2 1 0 2 2 2 0 Fungal kinase associated-1 domain ZZ PF00569.17 CCF74951.1 - 0.3 10.9 11.4 0.68 9.8 11.4 1.6 1 0 0 1 1 1 0 Zinc finger, ZZ type AP2 PF00847.20 CCF74952.1 - 0.00013 22.1 0.3 0.00036 20.7 0.3 1.7 1 0 0 1 1 1 1 AP2 domain eIF-5_eIF-2B PF01873.17 CCF74952.1 - 0.042 13.7 4.6 0.067 13.1 0.5 3.1 3 0 0 3 3 3 0 Domain found in IF2B/IF5 DZR PF12773.7 CCF74952.1 - 5.7 7.0 7.9 0.93 9.6 0.5 2.5 2 0 0 2 2 2 0 Double zinc ribbon Pkinase PF00069.25 CCF74953.1 - 8.5e-57 192.5 0.0 1.2e-56 192.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74953.1 - 4.3e-29 101.6 0.0 7.4e-29 100.8 0.0 1.4 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 CCF74953.1 - 2.6e-06 26.7 0.1 3.5e-06 26.2 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 CCF74953.1 - 0.02 14.2 0.1 0.046 13.1 0.1 1.6 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CLTH PF10607.9 CCF74954.1 - 1.4e-21 76.9 0.1 2.2e-21 76.3 0.1 1.3 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain SPRY PF00622.28 CCF74954.1 - 7.8e-15 55.0 0.4 1.6e-14 54.1 0.4 1.5 1 0 0 1 1 1 1 SPRY domain Elf1 PF05129.13 CCF74955.1 - 0.74 9.9 8.5 0.18 11.9 4.9 1.8 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Ank_4 PF13637.6 CCF74956.1 - 9.8e-28 96.2 3.8 2.1e-14 53.7 0.1 3.7 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Ank_2 PF12796.7 CCF74956.1 - 1.2e-27 96.3 6.5 1.7e-14 54.1 0.2 3.0 1 1 2 3 3 3 3 Ankyrin repeats (3 copies) Bromodomain PF00439.25 CCF74956.1 - 3e-20 72.1 0.4 1.8e-19 69.6 0.3 2.2 1 1 1 2 2 2 1 Bromodomain Ank_3 PF13606.6 CCF74956.1 - 1.3e-18 65.1 0.7 1.7e-05 24.8 0.0 4.9 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 CCF74956.1 - 1.4e-14 54.0 0.4 4.4e-06 26.9 0.1 3.9 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank PF00023.30 CCF74956.1 - 7.5e-13 48.3 0.4 2.3e-06 27.8 0.0 4.6 5 0 0 5 5 5 3 Ankyrin repeat DUF249 PF03158.13 CCF74956.1 - 0.0054 16.5 1.0 0.34 10.6 0.1 2.5 2 0 0 2 2 2 1 Multigene family 530 protein ECH_2 PF16113.5 CCF74956.1 - 0.079 12.4 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase PMM PF03332.13 CCF74957.1 - 1e-74 251.1 2.5 1.3e-74 250.7 2.5 1.1 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase Hydrolase_3 PF08282.12 CCF74957.1 - 1.1e-10 41.8 0.0 1.5e-10 41.3 0.0 1.3 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 CCF74957.1 - 0.036 14.2 0.0 0.073 13.2 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 CCF74957.1 - 0.11 12.8 0.1 3.6 7.8 0.3 2.5 2 1 1 3 3 3 0 haloacid dehalogenase-like hydrolase DUF1922 PF09082.10 CCF74957.1 - 0.14 12.4 0.0 0.28 11.5 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1922) HAD_2 PF13419.6 CCF74957.1 - 0.18 11.8 2.0 3 7.9 0.0 2.9 2 1 1 3 3 3 0 Haloacid dehalogenase-like hydrolase Gcd10p PF04189.13 CCF74959.1 - 7.2e-34 117.2 0.0 1e-33 116.8 0.0 1.2 1 0 0 1 1 1 1 Gcd10p family MFS_1 PF07690.16 CCF74960.1 - 0.00016 20.7 11.8 0.034 13.1 0.2 2.4 1 1 1 2 2 2 2 Major Facilitator Superfamily PRP1_N PF06424.12 CCF74961.1 - 9.9e-41 139.6 6.2 4.5e-36 124.5 1.2 2.6 2 0 0 2 2 2 2 PRP1 splicing factor, N-terminal TPR_14 PF13428.6 CCF74961.1 - 1e-13 50.9 3.9 0.59 11.1 0.1 10.6 5 2 7 12 12 12 2 Tetratricopeptide repeat TPR_19 PF14559.6 CCF74961.1 - 4.5e-13 49.5 7.6 0.31 11.6 0.0 8.1 7 1 1 8 8 8 3 Tetratricopeptide repeat TPR_17 PF13431.6 CCF74961.1 - 0.0035 17.6 0.1 0.78 10.3 0.0 4.6 3 1 1 4 4 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 CCF74961.1 - 0.037 14.1 0.1 36 4.8 0.0 4.9 5 0 0 5 5 5 0 Tetratricopeptide repeat PDCD2_C PF04194.13 CCF74961.1 - 0.16 12.0 1.4 0.4 10.7 1.4 1.6 1 0 0 1 1 1 0 Programmed cell death protein 2, C-terminal putative domain EntA_Immun PF08951.10 CCF74961.1 - 0.33 11.4 3.9 0.45 10.9 0.2 3.1 3 0 0 3 3 3 0 Enterocin A Immunity Vps35 PF03635.17 CCF74963.1 - 2e-169 565.5 18.1 2.3e-169 565.3 18.1 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 DUF2536 PF10750.9 CCF74963.1 - 0.016 15.1 0.4 0.042 13.7 0.4 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2536) Ribosomal_L11 PF00298.19 CCF74964.1 - 2.1e-22 79.4 0.0 3.1e-22 78.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 CCF74964.1 - 4e-21 74.6 0.2 7.6e-21 73.7 0.2 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Actin PF00022.19 CCF74965.1 - 1.7e-81 273.9 0.0 1.9e-80 270.5 0.0 1.9 1 1 0 1 1 1 1 Actin Es2 PF09751.9 CCF74966.1 - 1.4e-22 81.1 11.5 4.4e-11 43.2 8.2 3.8 1 1 1 2 2 2 2 Nuclear protein Es2 DUF2407_C PF13373.6 CCF74966.1 - 0.11 12.6 0.2 0.21 11.7 0.2 1.5 1 0 0 1 1 1 0 DUF2407 C-terminal domain zf-Tim10_DDP PF02953.15 CCF74970.1 - 3.1e-18 65.2 3.1 3.9e-18 64.8 3.1 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger FAST_1 PF06743.15 CCF74971.1 - 1.1e-05 25.3 10.3 0.16 11.9 1.5 4.7 4 1 1 5 5 5 3 FAST kinase-like protein, subdomain 1 TetR_C_14 PF17754.1 CCF74971.1 - 0.014 15.3 0.0 0.027 14.4 0.0 1.4 1 0 0 1 1 1 0 MftR C-terminal domain Ribosomal_L1 PF00687.21 CCF74972.1 - 4.1e-45 154.0 2.8 7e-45 153.3 2.8 1.5 1 1 0 1 1 1 1 Ribosomal protein L1p/L10e family DUF2664 PF10867.8 CCF74972.1 - 0.057 13.9 0.1 0.12 12.8 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2664) Asp PF00026.23 CCF74973.1 - 4.2e-20 72.4 9.5 2.4e-19 69.9 9.5 2.0 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 CCF74973.1 - 6.8e-06 26.4 2.0 0.00013 22.3 0.0 3.4 3 1 1 4 4 4 1 Xylanase inhibitor N-terminal Asp_protease_2 PF13650.6 CCF74973.1 - 0.0001 22.8 0.0 0.081 13.6 0.0 2.5 2 0 0 2 2 2 2 Aspartyl protease gag-asp_proteas PF13975.6 CCF74973.1 - 0.011 16.3 0.0 0.58 10.7 0.0 2.5 2 0 0 2 2 2 0 gag-polyprotein putative aspartyl protease UQ_con PF00179.26 CCF74974.1 - 9.9e-37 125.7 0.0 1.4e-36 125.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 CCF74974.1 - 0.014 15.1 0.0 0.021 14.5 0.0 1.4 1 1 0 1 1 1 0 Prokaryotic E2 family B UEV PF05743.13 CCF74974.1 - 0.039 13.8 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 UEV domain SNF2_N PF00176.23 CCF74975.1 - 1e-42 146.1 0.0 1.9e-42 145.2 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF74975.1 - 1.1e-13 51.5 0.0 8.7e-13 48.6 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF74975.1 - 8.7e-09 35.6 0.0 2.1e-08 34.4 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit DUF2075 PF09848.9 CCF74975.1 - 0.021 14.1 0.0 0.043 13.1 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) LSM PF01423.22 CCF74976.1 - 7.6e-18 64.0 0.1 8.6e-18 63.8 0.1 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 CCF74976.1 - 0.02 15.0 0.0 0.026 14.6 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain Dak1_2 PF13684.6 CCF74976.1 - 0.18 10.8 0.0 0.22 10.5 0.0 1.0 1 0 0 1 1 1 0 Dihydroxyacetone kinase family Ufd2P_core PF10408.9 CCF74978.1 - 1.3e-117 394.0 19.0 1.8e-117 393.6 19.0 1.1 1 0 0 1 1 1 1 Ubiquitin elongating factor core U-box PF04564.15 CCF74978.1 - 6.2e-27 93.6 4.1 8.2e-27 93.2 2.2 2.3 2 0 0 2 2 2 1 U-box domain uDENN PF03456.18 CCF74978.1 - 0.081 13.7 0.1 0.23 12.2 0.1 1.8 1 0 0 1 1 1 0 uDENN domain RNA_pol_Rpb1_5 PF04998.17 CCF74979.1 - 6.1e-80 268.5 0.1 9.5e-80 267.9 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 CCF74979.1 - 1.1e-61 207.9 0.0 5.9e-61 205.5 0.0 2.1 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 CCF74979.1 - 2.8e-26 92.3 0.2 1.5e-25 90.0 0.0 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_1 PF04997.12 CCF74979.1 - 1.2e-20 74.1 0.6 2.4e-20 73.1 0.6 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_4 PF05000.17 CCF74979.1 - 2.2e-17 63.0 0.1 7.5e-17 61.2 0.1 2.0 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 ArfGap PF01412.18 CCF74980.1 - 2.3e-30 105.1 3.8 3e-30 104.7 0.0 2.3 3 0 0 3 3 3 1 Putative GTPase activating protein for Arf Sporozoite_P67 PF05642.11 CCF74980.1 - 0.019 13.1 6.3 0.024 12.8 6.3 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen Nop14 PF04147.12 CCF74980.1 - 0.052 11.8 6.8 0.059 11.6 6.8 1.1 1 0 0 1 1 1 0 Nop14-like family DNA_pol_phi PF04931.13 CCF74980.1 - 0.15 10.1 8.4 0.18 9.9 8.4 1.2 1 0 0 1 1 1 0 DNA polymerase phi BSP_II PF05432.11 CCF74980.1 - 1.8 8.2 19.0 2.4 7.7 19.0 1.1 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) Paf1 PF03985.13 CCF74980.1 - 1.8 7.5 10.6 2.8 6.9 10.6 1.2 1 0 0 1 1 1 0 Paf1 NOA36 PF06524.12 CCF74980.1 - 2.7 7.2 9.4 4.2 6.6 9.4 1.2 1 0 0 1 1 1 0 NOA36 protein CoaE PF01121.20 CCF74981.1 - 3.7e-36 124.5 0.0 5.1e-36 124.0 0.0 1.2 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_18 PF13238.6 CCF74981.1 - 0.0012 19.4 0.0 0.0026 18.3 0.0 1.5 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 CCF74981.1 - 0.0019 18.3 0.1 0.034 14.3 0.1 2.1 2 0 0 2 2 2 1 Shikimate kinase Cytidylate_kin2 PF13189.6 CCF74981.1 - 0.033 14.3 0.0 8.4 6.5 0.0 2.2 2 0 0 2 2 2 0 Cytidylate kinase-like family AAA_28 PF13521.6 CCF74981.1 - 0.046 14.0 0.0 0.076 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 CCF74981.1 - 0.053 13.3 0.2 0.11 12.3 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_33 PF13671.6 CCF74981.1 - 0.077 13.2 0.0 0.16 12.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain dNK PF01712.19 CCF74981.1 - 0.14 12.0 0.0 0.23 11.3 0.0 1.5 1 0 0 1 1 1 0 Deoxynucleoside kinase zf-CCCH PF00642.24 CCF74982.1 - 3.4e-09 36.4 2.7 3.4e-09 36.4 2.7 2.5 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 CCF74982.1 - 3.1e-05 23.9 4.4 3.1e-05 23.9 4.4 2.7 2 0 0 2 2 2 1 Zinc finger domain zf-RING_UBOX PF13445.6 CCF74982.1 - 3.5e-05 23.7 5.8 0.00013 21.9 5.8 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_10 PF16685.5 CCF74982.1 - 0.00053 20.1 6.0 0.0006 19.9 4.2 2.1 2 0 0 2 2 2 1 zinc RING finger of MSL2 Zn_Tnp_IS91 PF14319.6 CCF74982.1 - 0.0024 17.8 6.3 0.0038 17.2 5.4 1.9 1 1 0 1 1 1 1 Transposase zinc-binding domain zf-C3HC4_3 PF13920.6 CCF74982.1 - 0.0031 17.3 5.4 0.0075 16.1 5.4 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-CCCH_4 PF18044.1 CCF74982.1 - 0.0038 17.0 2.8 0.0038 17.0 2.8 2.0 2 0 0 2 2 2 1 CCCH-type zinc finger zf-C3HC4 PF00097.25 CCF74982.1 - 0.0071 16.2 8.5 0.023 14.5 8.5 2.0 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF74982.1 - 0.011 15.6 9.1 0.029 14.2 9.1 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF74982.1 - 0.012 15.5 10.8 0.031 14.2 10.8 1.8 1 1 0 1 1 1 0 zinc-RING finger domain zf-C3HC4_4 PF15227.6 CCF74982.1 - 0.069 13.3 11.2 0.047 13.9 8.1 2.5 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-CCCH_2 PF14608.6 CCF74982.1 - 0.087 13.3 2.0 0.23 12.0 2.0 1.8 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger zf-RING_2 PF13639.6 CCF74982.1 - 0.19 12.1 8.6 0.38 11.1 7.7 2.1 1 1 0 1 1 1 0 Ring finger domain Prok-RING_4 PF14447.6 CCF74982.1 - 0.21 11.5 5.5 0.54 10.2 5.5 1.7 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 Rubredoxin_2 PF18073.1 CCF74982.1 - 2.7 7.8 13.5 0.12 12.1 7.5 2.0 2 0 0 2 2 2 0 Rubredoxin metal binding domain zf-CCCH_4 PF18044.1 CCF74983.1 - 1.1e-05 25.1 4.9 0.0024 17.6 0.4 4.2 4 0 0 4 4 4 2 CCCH-type zinc finger zf-CCCH_3 PF15663.5 CCF74983.1 - 0.00045 20.4 0.6 0.00045 20.4 0.6 2.1 2 0 0 2 2 2 1 Zinc-finger containing family zf-CCCH PF00642.24 CCF74983.1 - 0.038 13.9 0.7 0.038 13.9 0.7 5.2 6 1 0 6 6 6 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Pro_isomerase PF00160.21 CCF74984.1 - 2.2e-52 177.5 0.2 4.2e-52 176.6 0.2 1.5 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WD40 PF00400.32 CCF74984.1 - 7.7e-08 32.9 1.2 0.02 15.8 0.1 3.8 3 0 0 3 3 3 2 WD domain, G-beta repeat Ge1_WD40 PF16529.5 CCF74984.1 - 0.00022 20.3 0.7 0.41 9.6 0.0 2.8 2 1 0 2 2 2 2 WD40 region of Ge1, enhancer of mRNA-decapping protein ANAPC4_WD40 PF12894.7 CCF74984.1 - 0.0011 19.2 0.0 0.14 12.5 0.0 2.8 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain Mcl1_mid PF12341.8 CCF74984.1 - 0.019 14.3 0.0 4.5 6.5 0.0 2.2 2 0 0 2 2 2 0 Minichromosome loss protein, Mcl1, middle region tRNA-synt_2 PF00152.20 CCF74986.1 - 3e-80 269.7 0.2 4e-80 269.2 0.2 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CCF74986.1 - 9.5e-05 22.3 0.0 0.00019 21.3 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CCF74986.1 - 0.00055 19.5 0.4 0.0038 16.7 0.1 2.3 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) Peptidase_M24_C PF16188.5 CCF74986.1 - 0.059 13.4 0.1 0.14 12.3 0.1 1.5 1 0 0 1 1 1 0 C-terminal region of peptidase_M24 YqzE PF14038.6 CCF74986.1 - 0.15 12.1 0.6 7.2 6.7 0.2 2.6 2 0 0 2 2 2 0 YqzE-like protein PI3_PI4_kinase PF00454.27 CCF74987.1 - 1.3e-31 110.4 6.0 1.2e-22 81.0 1.8 2.9 2 1 1 3 3 3 2 Phosphatidylinositol 3- and 4-kinase PI3Ka PF00613.20 CCF74987.1 - 4.4e-07 29.5 0.5 9.3e-07 28.4 0.5 1.5 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) DUF4135 PF13575.6 CCF74987.1 - 0.023 14.1 0.0 0.045 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) Nse4_C PF08743.10 CCF74988.1 - 0.0045 17.2 0.6 0.025 14.8 0.0 2.5 3 1 0 3 3 3 1 Nse4 C-terminal DUF2804 PF10974.8 CCF74988.1 - 0.015 14.9 0.0 2.6 7.5 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2804) TPP_enzyme_M PF00205.22 CCF74988.1 - 0.15 11.8 0.9 0.24 11.1 0.9 1.3 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, central domain DEAD PF00270.29 CCF74989.1 - 2.2e-40 138.3 0.2 3.4e-40 137.7 0.2 1.3 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF74989.1 - 7.5e-22 77.8 0.3 3.2e-20 72.5 0.0 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 CCF74989.1 - 5.5e-10 39.3 0.3 1.2e-09 38.2 0.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) ResIII PF04851.15 CCF74989.1 - 1.7e-08 34.6 0.0 3.5e-08 33.6 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 CCF74989.1 - 0.0068 16.7 0.3 0.032 14.5 0.3 2.1 1 1 0 1 1 1 1 AAA domain Terminase_6 PF03237.15 CCF74989.1 - 0.14 11.8 0.0 0.28 10.8 0.0 1.5 1 0 0 1 1 1 0 Terminase-like family TRAF_BIRC3_bd PF16673.5 CCF74990.1 - 1.9 8.3 6.6 3.6 7.4 4.1 2.7 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain UPF0242 PF06785.11 CCF74990.1 - 3.7 7.6 7.8 9.1 6.3 7.8 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4200 PF13863.6 CCF74990.1 - 3.8 7.9 13.6 0.044 14.2 3.3 2.7 2 1 1 3 3 3 0 Domain of unknown function (DUF4200) RabGAP-TBC PF00566.18 CCF74991.1 - 5.6e-18 65.4 11.0 5.6e-18 65.4 11.0 2.5 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Pkinase PF00069.25 CCF74991.1 - 1.3e-11 44.4 5.6 7.8e-11 41.8 5.6 2.2 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF74991.1 - 1.1e-08 34.6 0.8 2.9e-08 33.3 0.1 2.0 3 0 0 3 3 3 1 Protein tyrosine kinase GYF_2 PF14237.6 CCF74993.1 - 1.3e-08 34.5 0.0 3.3e-08 33.2 0.0 1.7 1 0 0 1 1 1 1 GYF domain 2 RRM_1 PF00076.22 CCF74993.1 - 4e-07 29.8 0.2 0.00031 20.5 0.0 3.2 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF74993.1 - 0.002 18.2 0.0 0.005 16.9 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif GYF PF02213.16 CCF74993.1 - 0.069 12.8 0.1 2.6 7.8 0.0 2.7 2 0 0 2 2 2 0 GYF domain DUF5421 PF17458.2 CCF74993.1 - 0.073 12.5 1.7 0.14 11.5 1.7 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5421) SRP9-21 PF05486.12 CCF74994.1 - 0.0018 18.6 0.2 0.0031 17.9 0.2 1.5 1 1 1 2 2 2 1 Signal recognition particle 9 kDa protein (SRP9) NMD3 PF04981.13 CCF74995.1 - 1.5e-57 194.9 20.1 2e-57 194.4 20.1 1.2 1 0 0 1 1 1 1 NMD3 family TIP49 PF06068.13 CCF74995.1 - 0.52 9.5 3.6 4.2 6.5 2.8 2.1 2 0 0 2 2 2 0 TIP49 P-loop domain Brix PF04427.18 CCF74996.1 - 1.4e-33 116.6 0.4 2e-33 116.1 0.1 1.4 2 0 0 2 2 2 1 Brix domain Ribosomal_L30_N PF08079.12 CCF74996.1 - 0.077 13.3 2.0 0.12 12.6 2.0 1.4 1 0 0 1 1 1 0 Ribosomal L30 N-terminal domain FtsJ PF01728.19 CCF74997.1 - 1.4e-51 175.1 0.1 1.8e-51 174.8 0.1 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltr_RsmB-F PF01189.17 CCF74997.1 - 0.055 13.1 0.0 0.091 12.4 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F Adaptin_N PF01602.20 CCF74998.1 - 2.7e-43 148.4 22.8 3.7e-42 144.6 14.1 3.0 2 1 1 3 3 3 2 Adaptin N terminal region Cnd1 PF12717.7 CCF74998.1 - 7.9e-13 48.8 0.6 7.9e-13 48.8 0.6 4.0 3 2 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 B2-adapt-app_C PF09066.10 CCF74998.1 - 0.0008 19.5 0.0 0.0046 17.0 0.0 2.3 1 1 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain ParcG PF10274.9 CCF74998.1 - 0.0059 16.8 3.1 0.0081 16.3 0.3 2.6 3 0 0 3 3 3 1 Parkin co-regulated protein HEAT PF02985.22 CCF74998.1 - 0.0059 16.8 0.0 0.61 10.5 0.0 3.5 3 0 0 3 3 3 1 HEAT repeat HEAT_2 PF13646.6 CCF74998.1 - 0.0061 16.9 0.0 0.027 14.9 0.0 2.1 1 1 0 1 1 1 1 HEAT repeats zf-C3HC4_4 PF15227.6 CCF74999.1 - 1.6e-07 31.3 6.5 5.6e-07 29.6 6.5 2.0 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 CCF74999.1 - 4e-05 23.5 9.0 0.00012 22.0 9.0 1.9 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 CCF74999.1 - 6e-05 22.9 11.3 0.00024 21.0 11.3 2.1 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 CCF74999.1 - 0.00074 19.3 11.9 0.00074 19.3 11.9 2.6 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF74999.1 - 0.0015 18.4 9.8 0.0015 18.4 9.8 2.4 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 CCF74999.1 - 0.0032 17.7 11.0 0.0032 17.7 11.0 2.5 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 CCF74999.1 - 0.091 12.6 14.9 0.12 12.2 11.7 2.8 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 CCF74999.1 - 0.38 10.6 9.2 1.5 8.7 9.2 2.0 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain CLTH PF10607.9 CCF74999.1 - 0.43 10.5 7.9 0.092 12.6 1.3 3.0 2 1 1 3 3 3 0 CTLH/CRA C-terminal to LisH motif domain zf-C3HC4_3 PF13920.6 CCF75000.1 - 0.0014 18.4 11.2 0.0014 18.4 11.2 3.8 3 1 1 4 4 4 1 Zinc finger, C3HC4 type (RING finger) STAG PF08514.11 CCF75000.1 - 0.0026 17.7 0.0 0.0093 15.9 0.0 2.0 1 0 0 1 1 1 1 STAG domain zf-RING_2 PF13639.6 CCF75000.1 - 0.0075 16.6 11.6 0.0075 16.6 11.6 4.9 4 1 1 5 5 5 1 Ring finger domain zf-C3HC4_2 PF13923.6 CCF75000.1 - 1 9.3 27.7 0.18 11.7 11.5 4.9 4 0 0 4 4 4 0 Zinc finger, C3HC4 type (RING finger) FAD_binding_1 PF00667.20 CCF75001.1 - 2.5e-21 76.3 0.2 1.7e-19 70.3 0.0 2.1 2 0 0 2 2 2 2 FAD binding domain Flavodoxin_1 PF00258.25 CCF75001.1 - 3e-13 50.2 0.0 4.5e-13 49.6 0.0 1.3 1 0 0 1 1 1 1 Flavodoxin DUF3624 PF12292.8 CCF75002.1 - 0.037 14.4 0.8 0.077 13.4 0.3 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF3624) COBRA1 PF06209.13 CCF75003.1 - 5.1e-05 22.3 0.1 9.1e-05 21.5 0.1 1.4 1 0 0 1 1 1 1 Cofactor of BRCA1 (COBRA1) AAA PF00004.29 CCF75004.1 - 1.8e-43 148.1 0.0 4.1e-43 147.0 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF75004.1 - 2.6e-09 36.8 0.4 4.9e-09 35.8 0.4 1.5 1 0 0 1 1 1 1 AAA+ lid domain Prot_ATP_ID_OB PF16450.5 CCF75004.1 - 1.1e-08 34.8 0.2 2.6e-08 33.7 0.2 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_2 PF07724.14 CCF75004.1 - 7.3e-07 29.5 0.0 1.6e-06 28.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 CCF75004.1 - 1.4e-05 25.4 0.1 0.011 16.0 0.0 2.7 1 1 1 2 2 2 2 AAA domain RuvB_N PF05496.12 CCF75004.1 - 2.8e-05 23.9 0.0 5.8e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 CCF75004.1 - 3.8e-05 23.0 0.0 7e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_5 PF07728.14 CCF75004.1 - 4.2e-05 23.5 0.1 0.00029 20.9 0.1 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF75004.1 - 9.8e-05 22.8 0.0 0.003 18.0 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 CCF75004.1 - 0.0017 18.9 0.0 0.0036 17.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 CCF75004.1 - 0.0026 17.5 0.0 0.0052 16.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_14 PF13173.6 CCF75004.1 - 0.0045 17.0 0.0 0.01 15.9 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 CCF75004.1 - 0.0048 17.1 0.0 0.0093 16.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 CCF75004.1 - 0.0049 16.1 0.0 0.0099 15.1 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain RNA_helicase PF00910.22 CCF75004.1 - 0.0063 16.9 0.0 0.015 15.6 0.0 1.7 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 CCF75004.1 - 0.0078 16.5 0.0 0.017 15.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_3 PF07726.11 CCF75004.1 - 0.01 15.7 0.0 0.11 12.4 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 CCF75004.1 - 0.017 14.5 0.1 0.032 13.6 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 CCF75004.1 - 0.025 14.3 0.3 0.084 12.6 0.3 2.0 1 1 0 1 1 1 0 AAA domain Cytidylate_kin PF02224.18 CCF75004.1 - 0.026 14.3 0.1 3.6 7.3 0.0 2.6 2 0 0 2 2 2 0 Cytidylate kinase PhoH PF02562.16 CCF75004.1 - 0.029 13.8 0.1 0.13 11.7 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_7 PF12775.7 CCF75004.1 - 0.041 13.4 0.0 0.12 11.9 0.0 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region Prot_ATP_OB_N PF17758.1 CCF75004.1 - 0.053 13.2 0.1 0.18 11.5 0.0 1.9 2 0 0 2 2 1 0 Proteasomal ATPase OB N-terminal domain NACHT PF05729.12 CCF75004.1 - 0.058 13.3 0.0 0.5 10.3 0.0 2.3 1 1 1 2 2 2 0 NACHT domain AAA_30 PF13604.6 CCF75004.1 - 0.075 12.7 0.2 0.27 11.0 0.2 1.9 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CCF75004.1 - 0.077 13.5 0.2 0.41 11.1 0.2 2.3 1 1 0 1 1 1 0 ABC transporter AAA_25 PF13481.6 CCF75004.1 - 0.089 12.4 0.4 0.46 10.0 0.1 2.1 1 1 1 2 2 2 0 AAA domain ATPase PF06745.13 CCF75004.1 - 0.09 12.1 0.1 0.96 8.8 0.1 2.3 1 1 0 2 2 2 0 KaiC TsaE PF02367.17 CCF75004.1 - 0.1 12.6 0.0 0.2 11.7 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 CCF75004.1 - 0.16 11.0 0.0 0.29 10.2 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 Nup54 PF13874.6 CCF75005.1 - 2.7e-06 27.5 1.2 2.7e-06 27.5 1.2 2.3 1 1 1 2 2 2 1 Nucleoporin complex subunit 54 DUF3198 PF11433.8 CCF75005.1 - 0.06 13.2 0.1 0.18 11.7 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF3198) DERM PF14704.6 CCF75005.1 - 0.073 13.6 0.2 0.22 12.0 0.1 1.9 1 1 1 2 2 2 0 Dermatopontin zf-C3HC PF07967.13 CCF75005.1 - 0.073 13.1 0.5 0.073 13.1 0.5 2.2 3 0 0 3 3 3 0 C3HC zinc finger-like V-SNARE PF05008.15 CCF75005.1 - 1.4 9.4 0.0 1.4 9.4 0.0 3.3 3 2 1 4 4 4 0 Vesicle transport v-SNARE protein N-terminus ZapB PF06005.12 CCF75005.1 - 3.8 8.0 18.9 0.44 11.0 6.6 3.4 3 1 0 3 3 3 0 Cell division protein ZapB NYD-SP28 PF14772.6 CCF75005.1 - 4.3 7.4 7.5 2 8.5 0.4 3.2 2 1 1 3 3 3 0 Sperm tail MCU PF04678.13 CCF75005.1 - 6 6.9 7.3 1.1e+02 2.8 6.3 2.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter ABC_tran_CTD PF16326.5 CCF75005.1 - 6 7.2 12.3 2 8.7 0.7 3.8 3 2 2 5 5 5 0 ABC transporter C-terminal domain XRN_N PF03159.18 CCF75006.1 - 2.3e-56 190.9 0.0 3.9e-56 190.2 0.0 1.4 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN_M PF17846.1 CCF75006.1 - 6.1e-41 140.8 11.5 5.9e-28 98.0 5.5 2.6 2 1 1 3 3 3 2 Xrn1 helical domain PI-TkoII_IV PF18714.1 CCF75006.1 - 0.014 14.9 0.3 0.035 13.6 0.3 1.6 1 0 0 1 1 1 0 DNA polymerase II intein Domain IV PHD_4 PF16866.5 CCF75007.1 - 0.086 12.9 0.4 0.086 12.9 0.4 2.9 2 1 1 3 3 3 0 PHD-finger Prok-RING_2 PF14445.6 CCF75007.1 - 0.096 12.9 8.7 6 7.1 4.6 2.8 2 0 0 2 2 2 0 Prokaryotic RING finger family 2 C1_1 PF00130.22 CCF75007.1 - 0.35 10.8 0.1 0.35 10.8 0.1 3.3 3 1 0 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Baculo_gp64 PF03273.13 CCF75008.1 - 0.027 13.3 0.1 0.083 11.7 0.1 1.6 2 0 0 2 2 2 0 Baculovirus gp64 envelope glycoprotein family mTERF PF02536.14 CCF75010.1 - 4.6e-16 58.6 0.1 8.1e-15 54.5 0.0 2.3 2 0 0 2 2 2 1 mTERF IF3_N PF05198.16 CCF75010.1 - 5.3e-07 29.8 0.0 1.2e-06 28.7 0.0 1.6 1 0 0 1 1 1 1 Translation initiation factor IF-3, N-terminal domain IF3_C PF00707.22 CCF75010.1 - 0.00062 19.7 0.1 0.0013 18.6 0.1 1.5 1 0 0 1 1 1 1 Translation initiation factor IF-3, C-terminal domain gp45-slide_C PF09116.10 CCF75010.1 - 0.1 12.7 0.5 4.6 7.3 0.1 3.0 3 0 0 3 3 3 0 gp45 sliding clamp, C terminal SRP54 PF00448.22 CCF75011.1 - 4.7e-73 245.0 0.0 8.7e-73 244.1 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 CCF75011.1 - 1.7e-29 102.4 3.2 1.7e-29 102.4 3.2 2.8 2 1 0 2 2 2 1 Signal peptide binding domain SRP54_N PF02881.19 CCF75011.1 - 1.2e-16 60.6 0.5 3.8e-16 59.1 0.5 1.9 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_33 PF13671.6 CCF75011.1 - 8e-05 22.8 0.0 0.00017 21.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 CCF75011.1 - 0.00096 18.9 0.0 0.0018 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 CCF75011.1 - 0.0029 18.0 2.4 0.0074 16.7 0.1 2.6 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 CCF75011.1 - 0.003 16.9 0.1 0.0057 16.0 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 CCF75011.1 - 0.0091 16.3 0.2 0.039 14.2 0.2 2.2 1 1 0 1 1 1 1 AAA domain SRPRB PF09439.10 CCF75011.1 - 0.01 15.3 6.8 0.35 10.3 0.8 3.2 1 1 1 2 2 2 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 CCF75011.1 - 0.022 15.2 0.0 0.05 14.0 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain PduV-EutP PF10662.9 CCF75011.1 - 0.023 14.5 0.3 7.6 6.3 0.1 2.9 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation SIS PF01380.22 CCF75011.1 - 0.031 14.1 0.0 0.073 12.9 0.0 1.7 1 0 0 1 1 1 0 SIS domain cobW PF02492.19 CCF75011.1 - 0.082 12.5 4.8 0.55 9.8 1.9 2.7 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 CCF75011.1 - 0.09 13.3 0.9 2.1 8.9 0.9 2.7 1 1 0 1 1 1 0 AAA domain MeaB PF03308.16 CCF75011.1 - 0.091 11.7 1.2 0.38 9.7 0.1 2.6 3 1 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DNA_alkylation PF08713.11 CCF75012.1 - 0.038 13.7 0.0 0.092 12.4 0.0 1.6 1 0 0 1 1 1 0 DNA alkylation repair enzyme EIF_2_alpha PF07541.12 CCF75013.1 - 8.6e-27 93.5 0.0 1.4e-26 92.8 0.0 1.4 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 CCF75013.1 - 9.4e-10 38.7 0.7 9.4e-10 38.7 0.7 1.9 2 0 0 2 2 2 1 S1 RNA binding domain EXOSC1 PF10447.9 CCF75013.1 - 0.091 13.4 3.2 0.1 13.2 0.3 2.2 2 0 0 2 2 2 0 Exosome component EXOSC1/CSL4 TPR_12 PF13424.6 CCF75014.1 - 6.4e-18 64.8 2.4 7.2e-08 32.6 0.2 3.7 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_10 PF13374.6 CCF75014.1 - 4.9e-14 51.7 6.5 8.5e-06 25.5 0.2 4.6 5 0 0 5 5 5 3 Tetratricopeptide repeat TPR_2 PF07719.17 CCF75014.1 - 3.1e-12 45.6 0.9 2.5e-06 27.2 0.1 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF75014.1 - 5e-11 41.9 7.1 0.0025 17.9 0.1 4.8 4 1 0 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 CCF75014.1 - 5.9e-09 35.4 6.7 3.9e-06 26.4 0.2 4.2 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 CCF75014.1 - 4.9e-08 32.5 0.9 0.00046 20.0 0.0 3.9 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_6 PF13174.6 CCF75014.1 - 0.0052 17.3 0.3 4.2 8.2 0.1 3.7 4 1 0 4 4 4 1 Tetratricopeptide repeat MIT PF04212.18 CCF75014.1 - 0.0062 16.6 1.9 0.013 15.6 0.1 2.4 3 0 0 3 3 3 1 MIT (microtubule interacting and transport) domain TPR_17 PF13431.6 CCF75014.1 - 0.024 15.0 7.8 4.4 7.9 0.1 4.6 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_11 PF13414.6 CCF75014.1 - 0.025 14.3 3.5 0.88 9.3 0.9 4.1 2 1 1 3 3 3 0 TPR repeat ALIX_LYPXL_bnd PF13949.6 CCF75014.1 - 0.07 12.4 0.2 0.1 11.9 0.0 1.3 2 0 0 2 2 2 0 ALIX V-shaped domain binding to HIV Gal_Lectin PF02140.18 CCF75015.1 - 0.004 17.5 5.6 0.004 17.5 5.6 2.7 3 1 0 3 3 3 1 Galactose binding lectin domain tRNA_int_endo PF01974.17 CCF75016.1 - 1.4e-08 34.6 0.0 1.6e-08 34.5 0.0 1.0 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain G-patch PF01585.23 CCF75017.1 - 8.8e-15 54.3 0.5 1.6e-14 53.5 0.5 1.4 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 CCF75017.1 - 0.0078 16.3 0.5 0.032 14.3 0.5 2.0 1 0 0 1 1 1 1 G-patch domain AKAP2_C PF15304.6 CCF75017.1 - 0.013 14.8 2.6 0.019 14.3 2.6 1.2 1 0 0 1 1 1 0 A-kinase anchor protein 2 C-terminus RRM_1 PF00076.22 CCF75017.1 - 0.037 13.9 0.0 0.071 12.9 0.0 1.5 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BLI1 PF17324.2 CCF75017.1 - 0.091 13.4 0.4 2.7 8.7 0.1 2.3 2 0 0 2 2 2 0 BLOC-1 interactor 1 Gar1 PF04410.14 CCF75018.1 - 1.2e-10 41.4 6.5 4.7e-05 23.2 0.7 2.8 3 0 0 3 3 3 2 Gar1/Naf1 RNA binding region CHZ PF09649.10 CCF75019.1 - 0.035 13.6 0.1 0.07 12.6 0.1 1.5 1 0 0 1 1 1 0 Histone chaperone domain CHZ TFIIS_C PF01096.18 CCF75020.1 - 1.2e-14 53.8 4.1 1.2e-14 53.8 4.1 2.8 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) DZR PF12773.7 CCF75020.1 - 0.0083 16.1 8.1 0.34 11.0 1.0 2.5 2 1 0 2 2 2 2 Double zinc ribbon tRNA-synt_1f PF01921.18 CCF75020.1 - 0.046 12.6 0.4 0.077 11.9 0.4 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (K) DUF2757 PF10955.8 CCF75020.1 - 0.19 12.0 2.6 11 6.3 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2757) TF_Zn_Ribbon PF08271.12 CCF75020.1 - 1.7 8.2 13.4 0.57 9.7 2.1 3.3 2 1 0 2 2 2 0 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 CCF75020.1 - 1.8 8.6 9.8 0.39 10.7 0.6 2.7 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Nop10p PF04135.12 CCF75020.1 - 2.3 8.3 4.9 26 4.9 0.2 3.2 2 1 1 3 3 3 0 Nucleolar RNA-binding protein, Nop10p family PTH2 PF01981.16 CCF75021.1 - 2.3e-39 134.3 0.1 2.7e-39 134.1 0.1 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 UCR_14kD PF02271.16 CCF75022.1 - 4.7e-18 65.0 0.0 6.9e-18 64.5 0.0 1.3 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit KH_1 PF00013.29 CCF75024.1 - 1.6e-17 63.1 4.6 4.1e-12 45.7 0.8 4.4 3 1 1 4 4 4 3 KH domain KH_2 PF07650.17 CCF75024.1 - 9.5e-05 22.2 0.5 0.0004 20.2 0.5 2.1 1 0 0 1 1 1 1 KH domain UBA PF00627.31 CCF75025.1 - 4.1e-18 64.9 3.1 6.6e-09 35.5 0.2 2.5 2 0 0 2 2 2 2 UBA/TS-N domain XPC-binding PF09280.11 CCF75025.1 - 9e-17 60.6 7.3 6.6e-13 48.2 3.5 2.4 2 0 0 2 2 2 2 XPC-binding domain ubiquitin PF00240.23 CCF75025.1 - 1.7e-12 46.9 0.0 6e-12 45.1 0.1 1.8 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 CCF75025.1 - 0.00061 19.6 0.1 0.0011 18.8 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 CCF75025.1 - 0.0014 19.1 0.0 0.0026 18.3 0.0 1.4 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_5 PF18037.1 CCF75025.1 - 0.0059 16.9 0.1 0.012 15.9 0.1 1.5 1 0 0 1 1 1 1 Ubiquitin-like domain SOG2 PF10428.9 CCF75028.1 - 0.0017 17.6 6.3 0.002 17.4 6.3 1.0 1 0 0 1 1 1 1 RAM signalling pathway protein Peptidase_U32_C PF16325.5 CCF75028.1 - 0.0045 17.2 0.0 0.013 15.8 0.1 1.7 2 0 0 2 2 2 1 Peptidase family U32 C-terminal domain Macoilin PF09726.9 CCF75028.1 - 0.048 12.2 10.3 0.062 11.8 10.3 1.1 1 0 0 1 1 1 0 Macoilin family Presenilin PF01080.17 CCF75028.1 - 0.2 10.4 3.3 0.24 10.1 3.3 1.2 1 0 0 1 1 1 0 Presenilin Tubulin PF00091.25 CCF75029.1 - 8.1e-47 160.0 1.1 1.5e-46 159.1 1.1 1.4 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 CCF75029.1 - 1.3e-05 25.3 0.9 2.2e-05 24.6 0.2 1.8 2 0 0 2 2 2 1 Tubulin C-terminal domain Glyco_hydro_15 PF00723.21 CCF75029.1 - 0.011 14.5 0.0 0.011 14.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolases family 15 DUF4872 PF16169.5 CCF75029.1 - 0.066 13.0 0.0 0.6 9.8 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4872) DUF2655 PF10848.8 CCF75029.1 - 0.1 13.0 0.1 0.33 11.3 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2655) KH_1 PF00013.29 CCF75030.1 - 1.6e-29 101.5 3.7 4.2e-12 45.7 0.9 3.3 3 0 0 3 3 3 3 KH domain KH_2 PF07650.17 CCF75030.1 - 2.7e-07 30.3 0.1 0.00062 19.5 0.1 2.5 2 0 0 2 2 2 2 KH domain KH_5 PF13184.6 CCF75030.1 - 0.00023 21.2 1.2 0.005 16.9 0.5 2.4 2 0 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 CCF75030.1 - 0.027 14.3 0.1 0.42 10.5 0.0 2.3 2 0 0 2 2 2 0 KH domain DUF3098 PF11297.8 CCF75030.1 - 0.12 12.0 0.3 0.35 10.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) NSP2-B_epitope PF14757.6 CCF75030.1 - 0.12 12.0 0.2 0.27 10.9 0.1 1.6 1 1 0 1 1 1 0 Immunogenic region of nsp2 protein of arterivirus polyprotein SNF2_N PF00176.23 CCF75031.1 - 8.4e-57 192.5 4.2 9.6e-57 192.3 0.4 2.5 2 1 1 3 3 3 1 SNF2 family N-terminal domain Helicase_C PF00271.31 CCF75031.1 - 1.5e-20 73.6 0.0 3.6e-20 72.4 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Chromo PF00385.24 CCF75031.1 - 6.6e-20 70.8 1.8 1.6e-10 40.7 0.1 3.0 3 0 0 3 3 3 2 Chromo (CHRromatin Organisation MOdifier) domain HDA2-3 PF11496.8 CCF75031.1 - 1.9e-09 37.2 0.3 3.6e-09 36.2 0.3 1.4 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.15 CCF75031.1 - 7.6e-08 32.5 0.0 2.2e-07 31.0 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF4208 PF13907.6 CCF75031.1 - 4.5e-06 27.0 0.0 0.00013 22.4 0.0 2.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4208) DEAD PF00270.29 CCF75031.1 - 2.6e-05 24.1 0.0 5.1e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Rad54_N PF08658.10 CCF75031.1 - 0.085 13.0 5.8 5.9 7.0 0.1 2.8 2 0 0 2 2 2 0 Rad54 N terminal RRM_1 PF00076.22 CCF75033.1 - 1.1e-29 102.1 0.0 1.8e-17 62.9 0.2 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 CCF75033.1 - 2.3e-07 30.8 0.3 0.003 17.6 0.0 2.2 2 0 0 2 2 2 2 RNA binding motif RRM_7 PF16367.5 CCF75033.1 - 0.00037 20.5 0.1 0.0013 18.8 0.1 2.0 1 1 1 2 2 2 1 RNA recognition motif Nup35_RRM_2 PF14605.6 CCF75033.1 - 0.049 13.6 0.3 0.15 12.1 0.1 1.8 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif GMP_synt_C PF00958.22 CCF75035.1 - 2.3e-30 104.5 0.0 5.1e-30 103.4 0.0 1.6 1 0 0 1 1 1 1 GMP synthase C terminal domain GATase PF00117.28 CCF75035.1 - 2.4e-29 102.4 0.0 3.5e-29 101.9 0.0 1.2 1 0 0 1 1 1 1 Glutamine amidotransferase class-I NAD_synthase PF02540.17 CCF75035.1 - 1.3e-10 40.9 0.1 6.5e-09 35.3 0.1 2.3 2 0 0 2 2 2 1 NAD synthase Peptidase_C26 PF07722.13 CCF75035.1 - 2.2e-10 40.7 0.0 4.3e-10 39.7 0.0 1.6 1 1 0 1 1 1 1 Peptidase C26 ThiI PF02568.14 CCF75035.1 - 0.024 14.2 0.0 0.06 12.9 0.0 1.6 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 CCF75035.1 - 0.026 13.3 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 tRNA methyl transferase PAPS_reduct PF01507.19 CCF75035.1 - 0.033 14.2 0.0 0.11 12.5 0.0 1.8 2 0 0 2 2 2 0 Phosphoadenosine phosphosulfate reductase family GATase_3 PF07685.14 CCF75035.1 - 0.035 13.7 0.0 0.064 12.8 0.0 1.4 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ATP_bind_3 PF01171.20 CCF75035.1 - 0.083 12.6 0.0 0.14 11.9 0.0 1.3 1 0 0 1 1 1 0 PP-loop family GATase_5 PF13507.6 CCF75035.1 - 0.087 11.9 0.0 0.21 10.7 0.0 1.6 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain DUF3361 PF11841.8 CCF75035.1 - 0.1 12.6 0.1 9.9 6.1 0.1 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF3361) QueC PF06508.13 CCF75035.1 - 0.1 12.1 0.0 1 8.8 0.0 2.1 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC Thioredoxin PF00085.20 CCF75036.1 - 9.2e-33 112.3 0.1 4.3e-28 97.3 0.0 2.6 3 0 0 3 3 3 2 Thioredoxin Thioredoxin_6 PF13848.6 CCF75036.1 - 2.8e-10 40.4 0.1 0.00012 22.0 0.0 2.2 2 0 0 2 2 2 2 Thioredoxin-like domain OST3_OST6 PF04756.13 CCF75036.1 - 9.6e-10 38.3 1.0 2.8e-06 26.9 0.1 2.2 1 1 1 2 2 2 2 OST3 / OST6 family, transporter family TraF PF13728.6 CCF75036.1 - 1.3e-05 25.2 0.0 2.2e-05 24.4 0.0 1.3 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_2 PF13098.6 CCF75036.1 - 1.3e-05 25.6 0.0 4.7e-05 23.8 0.0 1.9 2 0 0 2 2 2 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 CCF75036.1 - 0.0013 19.0 0.0 0.015 15.6 0.0 2.5 1 1 0 1 1 1 1 Thioredoxin-like Thioredoxin_7 PF13899.6 CCF75036.1 - 0.01 16.0 0.0 0.029 14.5 0.0 1.8 1 0 0 1 1 1 1 Thioredoxin-like Glutaredoxin PF00462.24 CCF75036.1 - 0.063 13.5 0.4 0.17 12.2 0.0 1.9 2 0 0 2 2 2 0 Glutaredoxin Proteasome PF00227.26 CCF75037.1 - 1.3e-42 145.4 0.5 1.5e-42 145.2 0.5 1.0 1 0 0 1 1 1 1 Proteasome subunit Cyclin_N PF00134.23 CCF75038.1 - 0.13 12.0 0.8 0.79 9.5 0.1 2.7 2 1 0 2 2 2 0 Cyclin, N-terminal domain Syja_N PF02383.18 CCF75039.1 - 5.9e-66 223.0 0.2 1.1e-65 222.1 0.2 1.4 1 0 0 1 1 1 1 SacI homology domain LPD38 PF18857.1 CCF75041.1 - 0.038 14.1 0.0 0.049 13.8 0.0 1.2 1 0 0 1 1 1 0 Large polyvalent protein associated domain 38 Gag_p30 PF02093.16 CCF75041.1 - 0.054 13.0 0.0 0.06 12.8 0.0 1.2 1 0 0 1 1 1 0 Gag P30 core shell protein BRCA-2_OB1 PF09103.10 CCF75043.1 - 3.1e-06 27.1 0.0 1.1e-05 25.4 0.0 2.0 1 0 0 1 1 1 1 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 YonK PF09642.10 CCF75043.1 - 0.029 14.5 0.1 0.093 12.9 0.1 1.8 1 0 0 1 1 1 0 YonK protein Siva PF05458.12 CCF75044.1 - 0.0034 17.1 5.1 0.0044 16.7 5.1 1.1 1 0 0 1 1 1 1 Cd27 binding protein (Siva) zf-RING_5 PF14634.6 CCF75044.1 - 0.0059 16.5 14.6 0.0059 16.5 14.6 1.7 2 0 0 2 2 2 1 zinc-RING finger domain Rad50_zn_hook PF04423.14 CCF75044.1 - 0.012 15.5 0.1 0.012 15.5 0.1 1.6 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-RING_UBOX PF13445.6 CCF75044.1 - 0.055 13.5 7.4 0.12 12.4 7.4 1.7 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4 PF00097.25 CCF75044.1 - 0.17 11.7 12.2 0.42 10.5 12.2 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Proteasome PF00227.26 CCF75045.1 - 8.1e-48 162.4 0.2 1.1e-47 162.1 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit Prp18 PF02840.15 CCF75046.1 - 0.0013 18.8 0.2 0.0029 17.6 0.2 1.5 1 0 0 1 1 1 1 Prp18 domain SRA1 PF07304.11 CCF75046.1 - 0.25 11.1 2.5 7 6.4 0.1 2.5 2 1 0 2 2 2 0 Steroid receptor RNA activator (SRA1) AAA_lid_9 PF17871.1 CCF75047.1 - 9e-25 86.6 0.0 2e-24 85.5 0.0 1.6 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 CCF75047.1 - 3.6e-10 40.4 0.0 2.5e-09 37.6 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF75047.1 - 4.7e-09 36.9 0.1 2.5e-07 31.3 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 CCF75047.1 - 7.3e-08 32.7 0.0 9.7e-06 25.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 CCF75047.1 - 4.2e-05 23.6 0.0 0.00066 19.7 0.0 2.7 4 0 0 4 4 4 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CCF75047.1 - 0.0006 20.1 0.0 0.028 14.7 0.0 2.7 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.17 CCF75047.1 - 0.0023 17.7 0.0 0.005 16.6 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein NACHT PF05729.12 CCF75047.1 - 0.014 15.3 0.0 0.041 13.8 0.0 1.8 1 0 0 1 1 1 0 NACHT domain Mg_chelatase PF01078.21 CCF75047.1 - 0.022 14.2 0.0 0.13 11.6 0.0 2.1 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 CCF75047.1 - 0.024 14.1 0.0 0.26 10.8 0.0 2.5 3 0 0 3 3 3 0 P-loop containing dynein motor region DUF815 PF05673.13 CCF75047.1 - 0.05 12.8 0.1 0.11 11.6 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TniB PF05621.11 CCF75047.1 - 0.055 12.9 0.0 2.4 7.5 0.0 2.4 1 1 1 2 2 2 0 Bacterial TniB protein AAA_19 PF13245.6 CCF75047.1 - 0.086 13.2 0.0 0.22 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CCF75047.1 - 0.09 13.3 0.0 0.27 11.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain RuvB_N PF05496.12 CCF75047.1 - 0.15 11.8 0.2 1.4 8.6 0.2 2.4 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain WSD PF15613.6 CCF75048.1 - 9.8e-05 22.8 0.0 0.0059 17.1 0.0 3.2 4 0 0 4 4 4 1 Williams-Beuren syndrome DDT (WSD), D-TOX E motif DNMT1-RFD PF12047.8 CCF75048.1 - 0.0024 17.9 0.0 0.0061 16.6 0.0 1.6 1 0 0 1 1 1 1 Cytosine specific DNA methyltransferase replication foci domain DDT PF02791.17 CCF75048.1 - 0.05 13.9 0.3 0.91 9.9 0.0 3.1 3 0 0 3 3 3 0 DDT domain Aminotran_5 PF00266.19 CCF75049.1 - 8.9e-75 251.9 0.0 1e-74 251.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 CCF75049.1 - 6.3e-05 22.4 0.0 9.2e-05 21.9 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 CCF75049.1 - 0.0029 17.0 0.1 0.0042 16.4 0.1 1.3 1 1 0 1 1 1 1 Beta-eliminating lyase Cys_Met_Meta_PP PF01053.20 CCF75049.1 - 0.058 11.9 0.0 0.09 11.3 0.0 1.3 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme Cpn60_TCP1 PF00118.24 CCF75051.1 - 1.7e-149 498.7 6.7 1.9e-149 498.5 6.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family SF3b1 PF08920.10 CCF75053.1 - 1.2e-24 87.1 8.6 2.9e-24 85.8 7.1 2.4 1 1 1 2 2 2 1 Splicing factor 3B subunit 1 HEAT PF02985.22 CCF75053.1 - 1.3e-13 49.9 1.1 0.17 12.2 0.0 8.5 9 0 0 9 9 9 2 HEAT repeat HEAT_2 PF13646.6 CCF75053.1 - 8.4e-13 48.5 1.1 0.053 13.9 0.0 7.5 5 2 3 8 8 8 3 HEAT repeats HEAT_EZ PF13513.6 CCF75053.1 - 4.8e-10 39.7 0.6 0.0037 17.7 0.0 6.8 6 1 1 7 7 7 1 HEAT-like repeat Cnd1 PF12717.7 CCF75053.1 - 8.8e-06 25.9 6.9 1.9 8.5 0.0 6.7 6 2 2 8 8 8 2 non-SMC mitotic condensation complex subunit 1 Vac14_Fab1_bd PF12755.7 CCF75053.1 - 0.00025 21.6 0.1 0.06 13.9 0.0 3.7 3 0 0 3 3 3 1 Vacuolar 14 Fab1-binding region CLASP_N PF12348.8 CCF75053.1 - 0.00095 18.8 0.3 0.88 9.1 0.0 2.9 3 0 0 3 3 3 2 CLASP N terminal NUC173 PF08161.12 CCF75053.1 - 0.0019 17.9 0.1 4.1 7.0 0.0 3.9 4 0 0 4 4 4 1 NUC173 domain IFRD PF05004.13 CCF75053.1 - 0.0025 17.0 0.1 0.041 13.0 0.0 2.6 2 1 1 3 3 3 1 Interferon-related developmental regulator (IFRD) UME PF08064.13 CCF75053.1 - 0.014 15.3 1.9 9.7 6.2 0.0 5.1 4 3 1 5 5 5 0 UME (NUC010) domain MMS19_C PF12460.8 CCF75053.1 - 0.029 13.5 0.0 15 4.6 0.0 3.7 4 0 0 4 4 4 0 RNAPII transcription regulator C-terminal Ribul_P_3_epim PF00834.19 CCF75053.1 - 0.11 11.8 0.6 0.43 9.9 0.0 2.0 2 0 0 2 2 2 0 Ribulose-phosphate 3 epimerase family DUF4845 PF16137.5 CCF75054.1 - 4.2 8.3 6.4 3 8.8 0.2 3.4 4 1 1 5 5 5 0 Domain of unknown function (DUF4845) Prp19 PF08606.11 CCF75055.1 - 2.3e-29 101.2 0.5 4.5e-29 100.2 0.5 1.5 1 0 0 1 1 1 1 Prp19/Pso4-like WD40 PF00400.32 CCF75055.1 - 1.9e-28 98.1 15.2 6.4e-07 30.0 0.2 7.0 6 0 0 6 6 6 6 WD domain, G-beta repeat AHSA1 PF08327.11 CCF75055.1 - 5.8e-10 39.5 0.0 1.3e-08 35.1 0.0 2.4 2 0 0 2 2 2 1 Activator of Hsp90 ATPase homolog 1-like protein ANAPC4_WD40 PF12894.7 CCF75055.1 - 5.3e-07 29.9 0.1 0.087 13.1 0.0 4.7 2 1 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain zf-Nse PF11789.8 CCF75055.1 - 0.00068 19.4 0.0 0.0035 17.1 0.0 2.2 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit WD40_like PF17005.5 CCF75055.1 - 0.0074 15.6 0.8 0.15 11.4 0.1 2.9 2 1 1 3 3 3 1 WD40-like domain U-box PF04564.15 CCF75055.1 - 0.011 15.9 0.0 0.03 14.5 0.0 1.7 1 0 0 1 1 1 0 U-box domain Pyr_redox_2 PF07992.14 CCF75056.1 - 2.1e-61 207.7 0.6 2.8e-61 207.3 0.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 CCF75056.1 - 2.7e-33 114.5 0.2 9.2e-33 112.8 0.1 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 CCF75056.1 - 7e-20 71.4 5.8 9.3e-18 64.6 0.9 2.8 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 CCF75056.1 - 2.9e-12 46.5 6.6 4.4e-10 39.3 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 CCF75056.1 - 6.1e-10 38.4 10.9 0.00012 21.0 1.1 4.6 4 1 1 5 5 5 3 HI0933-like protein FAD_oxidored PF12831.7 CCF75056.1 - 2.9e-09 36.8 1.5 3.1e-09 36.7 0.4 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 CCF75056.1 - 7.6e-08 32.5 1.8 1.9e-05 24.8 0.7 2.6 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 CCF75056.1 - 1.4e-06 27.7 0.3 0.00052 19.3 0.1 2.4 2 0 0 2 2 2 2 Thi4 family FAD_binding_2 PF00890.24 CCF75056.1 - 2.6e-06 26.8 1.8 2.6e-06 26.8 1.8 3.4 3 1 1 4 4 4 1 FAD binding domain DAO PF01266.24 CCF75056.1 - 6.7e-06 25.9 6.8 0.0029 17.2 0.1 3.6 4 0 0 4 4 4 2 FAD dependent oxidoreductase GIDA PF01134.22 CCF75056.1 - 1.5e-05 24.3 12.0 0.00056 19.1 8.6 3.4 2 1 0 2 2 2 1 Glucose inhibited division protein A 3HCDH_N PF02737.18 CCF75056.1 - 0.0007 19.5 6.4 0.0015 18.5 0.2 2.7 3 0 0 3 3 3 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 CCF75056.1 - 0.0033 16.5 2.4 0.47 9.4 0.7 2.4 2 0 0 2 2 2 2 Lycopene cyclase protein K_oxygenase PF13434.6 CCF75056.1 - 0.005 16.0 0.8 0.1 11.7 0.0 2.3 2 1 1 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) AlaDh_PNT_C PF01262.21 CCF75056.1 - 0.01 15.2 6.0 0.3 10.4 0.1 3.7 1 1 1 3 3 3 0 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 CCF75056.1 - 0.04 13.2 7.9 0.54 9.4 0.7 3.1 2 1 1 3 3 3 0 FAD binding domain 2-Hacid_dh_C PF02826.19 CCF75056.1 - 0.053 12.9 0.0 0.17 11.2 0.0 1.9 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 CCF75056.1 - 0.13 12.3 0.9 0.53 10.2 0.1 2.4 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_7 PF13241.6 CCF75056.1 - 0.18 12.3 1.3 2.4 8.7 0.1 3.0 3 0 0 3 3 3 0 Putative NAD(P)-binding NAD_binding_9 PF13454.6 CCF75056.1 - 0.84 9.6 5.6 4.2 7.4 0.1 3.5 4 0 0 4 4 4 0 FAD-NAD(P)-binding Cpn60_TCP1 PF00118.24 CCF75057.1 - 1e-77 261.8 1.8 1.9e-77 260.9 1.8 1.5 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family PriC PF07445.12 CCF75057.1 - 0.01 15.7 0.0 0.022 14.7 0.0 1.5 1 0 0 1 1 1 0 Primosomal replication protein priC DUF5105 PF17118.5 CCF75057.1 - 0.67 9.7 4.6 0.48 10.2 0.2 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF5105) Cyt-b5 PF00173.28 CCF75058.1 - 5.6e-17 61.6 0.0 6.8e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain DUF572 PF04502.13 CCF75059.1 - 1.9e-38 132.9 8.2 7.1e-38 131.1 8.2 1.8 1 1 0 1 1 1 1 Family of unknown function (DUF572) DUF866 PF05907.13 CCF75059.1 - 0.0025 17.8 1.5 0.0035 17.3 0.0 1.9 2 1 0 2 2 2 1 Eukaryotic protein of unknown function (DUF866) Cys_rich_KTR PF14205.6 CCF75059.1 - 2.4 8.0 6.2 0.85 9.5 0.1 3.0 3 0 0 3 3 3 0 Cysteine-rich KTR ATP-synt_10 PF05176.14 CCF75060.1 - 0.09 12.0 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 ATP10 protein NTP_transf_2 PF01909.23 CCF75061.1 - 0.00026 21.2 0.1 0.00092 19.5 0.0 2.1 2 0 0 2 2 2 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 CCF75061.1 - 0.021 15.1 0.0 0.055 13.7 0.0 1.8 1 0 0 1 1 1 0 Cid1 family poly A polymerase ThrE PF06738.12 CCF75062.1 - 0.0055 16.1 3.8 0.0094 15.3 3.8 1.4 1 1 0 1 1 1 1 Putative threonine/serine exporter DUF1129 PF06570.11 CCF75062.1 - 1.4 8.3 7.6 2.5 7.6 7.6 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) UFD1 PF03152.14 CCF75063.1 - 8.4e-73 243.5 0.0 1.3e-72 242.8 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 CDC48_2 PF02933.17 CCF75063.1 - 0.0074 16.0 0.0 0.018 14.8 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 CHCH PF06747.13 CCF75063.1 - 0.018 15.2 7.9 0.18 12.0 2.4 2.5 2 0 0 2 2 2 0 CHCH domain COX6B PF02297.17 CCF75063.1 - 0.32 11.2 4.5 0.67 10.2 4.5 1.5 1 0 0 1 1 1 0 Cytochrome oxidase c subunit VIb CX9C PF16860.5 CCF75063.1 - 0.33 11.0 9.9 0.15 12.1 2.4 2.5 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, MCM PF00493.23 CCF75064.1 - 3.2e-87 291.3 0.0 8e-79 263.9 0.0 2.3 2 0 0 2 2 2 2 MCM P-loop domain MCM_OB PF17207.3 CCF75064.1 - 3.7e-31 107.6 0.2 7.1e-31 106.7 0.2 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 CCF75064.1 - 1.7e-21 76.4 0.1 5e-21 74.9 0.1 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 CCF75064.1 - 2e-09 37.9 0.5 6e-09 36.4 0.0 2.1 2 0 0 2 2 2 1 MCM N-terminal domain Mg_chelatase PF01078.21 CCF75064.1 - 5.1e-09 35.8 0.2 2.5e-06 27.0 0.1 2.9 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 CCF75064.1 - 0.00041 20.4 0.0 0.0012 18.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 CCF75064.1 - 0.00056 19.6 0.0 0.0031 17.3 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_3 PF07726.11 CCF75064.1 - 0.031 14.1 0.0 0.084 12.7 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA PF00004.29 CCF75064.1 - 0.067 13.6 0.0 0.2 12.1 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF75064.1 - 0.15 12.5 0.4 0.81 10.0 0.1 2.4 2 0 0 2 2 2 0 AAA ATPase domain Photo_RC PF00124.19 CCF75067.1 - 0.057 12.6 0.0 0.069 12.4 0.0 1.1 1 0 0 1 1 1 0 Photosynthetic reaction centre protein Baseplate PF16774.5 CCF75067.1 - 0.2 11.6 3.0 0.11 12.4 1.2 1.5 2 0 0 2 2 2 0 Baseplate protein 5_3_exonuc_N PF02739.16 CCF75068.1 - 1.9e-38 131.9 0.0 3.1e-38 131.2 0.0 1.3 1 0 0 1 1 1 1 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.20 CCF75068.1 - 6.3e-18 65.2 0.0 1.2e-17 64.2 0.0 1.5 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold NYN_YacP PF05991.11 CCF75068.1 - 0.008 16.1 0.0 0.013 15.5 0.0 1.3 1 0 0 1 1 1 1 YacP-like NYN domain COX6C PF02937.15 CCF75068.1 - 0.16 12.1 0.4 0.37 10.9 0.4 1.5 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc Sel1 PF08238.12 CCF75069.1 - 0.0015 19.1 17.9 0.14 12.8 0.1 6.0 7 0 0 7 7 7 3 Sel1 repeat DUF840 PF05801.11 CCF75069.1 - 0.077 13.1 0.6 0.29 11.2 0.3 2.1 2 0 0 2 2 2 0 Lagovirus protein of unknown function (DUF840) RRM_1 PF00076.22 CCF75070.1 - 4.3e-17 61.7 0.0 6.9e-17 61.0 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF75070.1 - 1.5e-05 24.6 0.0 2.5e-05 23.9 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Rpn9_C PF18261.1 CCF75071.1 - 0.066 12.8 0.6 0.19 11.3 0.6 1.8 1 1 0 1 1 1 0 Rpn9 C-terminal helix tRNA-synt_1 PF00133.22 CCF75072.1 - 4.8e-89 299.2 0.1 1.3e-68 231.8 0.0 3.3 2 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 CCF75072.1 - 1.4e-20 73.4 0.0 4.7e-10 38.8 0.0 3.8 3 1 0 3 3 3 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 CCF75072.1 - 8.7e-14 51.7 0.2 2.1e-13 50.5 0.2 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA zf-FPG_IleRS PF06827.14 CCF75072.1 - 0.00014 21.6 1.1 0.00014 21.6 1.1 1.8 2 0 0 2 2 2 1 Zinc finger found in FPG and IleRS zf-P11 PF03854.14 CCF75072.1 - 0.42 10.3 6.5 0.62 9.8 3.8 2.3 2 0 0 2 2 2 0 P-11 zinc finger MPC PF03650.13 CCF75073.1 - 5.8e-32 110.1 0.1 6.6e-32 109.9 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers RRM_1 PF00076.22 CCF75076.1 - 2.8e-20 71.9 0.0 4.8e-20 71.2 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) U1snRNP70_N PF12220.8 CCF75076.1 - 2.4e-15 56.9 1.5 2.4e-15 56.9 1.5 1.9 2 0 0 2 2 2 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal NAD_binding_1 PF00175.21 CCF75077.1 - 1.8e-12 47.9 0.0 1.8e-11 44.7 0.0 2.2 2 0 0 2 2 2 1 Oxidoreductase NAD-binding domain NAD_binding_6 PF08030.12 CCF75077.1 - 0.00027 21.1 0.2 0.0015 18.7 0.0 2.2 2 0 0 2 2 2 1 Ferric reductase NAD binding domain TusA PF01206.17 CCF75079.1 - 0.018 14.8 0.0 0.024 14.5 0.0 1.4 1 1 0 1 1 1 0 Sulfurtransferase TusA PseudoU_synth_2 PF00849.22 CCF75080.1 - 0.064 13.3 0.0 0.079 13.0 0.0 1.1 1 0 0 1 1 1 0 RNA pseudouridylate synthase RNase_H2_suC PF08615.11 CCF75081.1 - 7.9e-07 29.3 0.0 1e-06 29.0 0.0 1.1 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) TLD PF07534.16 CCF75084.1 - 1.1e-24 87.2 0.3 2.8e-24 85.9 0.3 1.7 1 0 0 1 1 1 1 TLD RAP PF08373.10 CCF75086.1 - 0.015 15.4 0.3 0.063 13.4 0.1 2.3 2 0 0 2 2 2 0 RAP domain Ras PF00071.22 CCF75087.1 - 8.4e-06 25.5 0.0 1e-05 25.2 0.0 1.1 1 0 0 1 1 1 1 Ras family Dynamin_N PF00350.23 CCF75087.1 - 0.034 14.2 0.0 0.057 13.5 0.0 1.4 1 1 0 1 1 1 0 Dynamin family Roc PF08477.13 CCF75087.1 - 0.038 14.2 0.0 0.048 13.9 0.0 1.2 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ATPase_2 PF01637.18 CCF75087.1 - 0.059 13.3 0.0 0.068 13.1 0.0 1.2 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 CCF75087.1 - 0.096 12.8 0.1 0.24 11.5 0.1 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase Corona_M PF01635.18 CCF75087.1 - 0.11 11.8 0.0 0.17 11.2 0.0 1.2 1 0 0 1 1 1 0 Coronavirus M matrix/glycoprotein APG6_N PF17675.1 CCF75088.1 - 0.0044 17.5 14.1 0.0044 17.5 14.1 1.6 1 1 0 1 1 1 1 Apg6 coiled-coil region Spc7 PF08317.11 CCF75088.1 - 0.044 12.7 13.0 0.048 12.5 13.0 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein CENP-F_leu_zip PF10473.9 CCF75088.1 - 0.049 13.6 15.8 0.17 11.9 15.7 1.7 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Seryl_tRNA_N PF02403.22 CCF75088.1 - 0.07 13.4 8.9 0.23 11.7 8.9 1.8 1 1 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Nairovirus_M PF07948.11 CCF75088.1 - 0.088 11.0 0.5 0.097 10.9 0.5 1.0 1 0 0 1 1 1 0 Nairovirus M polyprotein-like Jnk-SapK_ap_N PF09744.9 CCF75088.1 - 0.099 12.9 15.3 0.12 12.5 15.3 1.2 1 0 0 1 1 1 0 JNK_SAPK-associated protein-1 Phage_GP20 PF06810.11 CCF75088.1 - 0.1 12.4 10.1 0.16 11.8 5.9 2.0 1 1 1 2 2 2 0 Phage minor structural protein GP20 Suppressor_APC PF11414.8 CCF75088.1 - 0.16 12.1 6.0 0.13 12.3 4.8 1.6 1 1 0 1 1 1 0 Adenomatous polyposis coli tumour suppressor protein DUF4164 PF13747.6 CCF75088.1 - 0.46 10.8 12.0 0.7 10.2 5.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4164) PRKG1_interact PF15898.5 CCF75088.1 - 1 10.3 11.7 2.1 9.3 11.6 1.7 1 1 1 2 2 2 0 cGMP-dependent protein kinase interacting domain YojJ PF10372.9 CCF75088.1 - 1 9.5 7.5 3.9 7.6 0.8 2.5 1 1 1 2 2 2 0 Bacterial membrane-spanning protein N-terminus CREPT PF16566.5 CCF75088.1 - 1.1 9.5 9.0 0.52 10.5 5.3 1.9 1 1 1 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour UPF0242 PF06785.11 CCF75088.1 - 4.1 7.5 16.1 49 3.9 16.1 1.9 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus DUF4140 PF13600.6 CCF75088.1 - 8.7 6.9 10.5 24 5.4 4.5 2.3 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) CS PF04969.16 CCF75090.1 - 0.017 16.1 0.1 0.036 15.1 0.1 1.5 1 0 0 1 1 1 0 CS domain Potassium_chann PF11404.8 CCF75090.1 - 0.03 14.1 0.1 0.062 13.1 0.1 1.5 1 0 0 1 1 1 0 Potassium voltage-gated channel CDC37_N PF03234.14 CCF75090.1 - 0.18 12.7 0.7 0.33 11.9 0.2 1.7 2 0 0 2 2 2 0 Cdc37 N terminal kinase binding V-SNARE_C PF12352.8 CCF75091.1 - 3.3e-06 27.3 1.8 3.3e-06 27.3 1.8 2.0 2 0 0 2 2 2 1 Snare region anchored in the vesicle membrane C-terminus Pox_A14 PF05767.12 CCF75091.1 - 0.011 15.9 0.2 0.025 14.7 0.2 1.6 1 0 0 1 1 1 0 Poxvirus virion envelope protein A14 DUF3958 PF13125.6 CCF75091.1 - 0.053 13.7 5.3 0.031 14.5 3.0 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF3958) Sec20 PF03908.13 CCF75091.1 - 0.17 11.8 10.6 0.037 13.9 1.8 3.3 1 1 3 4 4 4 0 Sec20 DASH_Ask1 PF08655.10 CCF75091.1 - 0.17 11.8 1.7 13 5.7 0.1 2.7 2 0 0 2 2 2 0 DASH complex subunit Ask1 Flagellin_N PF00669.20 CCF75091.1 - 0.19 11.8 4.5 4.8 7.3 0.1 2.7 2 1 0 2 2 2 0 Bacterial flagellin N-terminal helical region Ureide_permease PF07168.11 CCF75091.1 - 0.37 9.5 3.0 0.24 10.1 1.2 1.5 1 1 0 1 1 1 0 Ureide permease mCpol PF18182.1 CCF75091.1 - 4.3 7.7 7.8 17 5.8 0.8 3.2 1 1 2 3 3 3 0 minimal CRISPR polymerase domain Laminin_II PF06009.12 CCF75091.1 - 5.7 7.0 12.4 2.8 8.0 1.9 2.8 1 1 1 3 3 3 0 Laminin Domain II SIR2 PF02146.17 CCF75092.1 - 2e-24 86.5 0.0 3.3e-24 85.8 0.0 1.4 1 0 0 1 1 1 1 Sir2 family zf-Nse PF11789.8 CCF75093.1 - 5.7e-12 45.3 0.4 2.3e-11 43.3 0.4 1.9 1 1 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit GTP_EFTU PF00009.27 CCF75094.1 - 7.7e-63 211.6 0.1 1.2e-62 210.9 0.1 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 CCF75094.1 - 6.9e-29 100.1 0.0 2.5e-28 98.3 0.0 2.0 2 0 0 2 2 2 1 Elongation factor G, domain IV EFG_C PF00679.24 CCF75094.1 - 1.1e-21 76.7 0.0 2.7e-21 75.4 0.0 1.7 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 CCF75094.1 - 2.3e-14 53.2 0.0 4.9e-14 52.2 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 CCF75094.1 - 2.9e-13 50.0 0.1 1.2e-12 48.0 0.0 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 CCF75094.1 - 0.00079 19.5 0.0 0.002 18.2 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 CCF75094.1 - 0.057 13.2 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Thiolase_N PF00108.23 CCF75095.1 - 3.3e-27 95.5 0.0 4.4e-27 95.1 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 CCF75095.1 - 1.2e-16 60.4 0.0 2.9e-16 59.2 0.0 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain cwf21 PF08312.12 CCF75096.1 - 6.3e-09 35.8 6.1 1.6e-08 34.5 6.1 1.7 1 0 0 1 1 1 1 cwf21 domain rve PF00665.26 CCF75096.1 - 0.061 13.5 0.1 0.11 12.7 0.1 1.4 1 0 0 1 1 1 0 Integrase core domain MqsA_antitoxin PF15731.5 CCF75096.1 - 0.071 13.2 0.2 0.071 13.2 0.2 1.7 2 0 0 2 2 2 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA DUF4505 PF14956.6 CCF75097.1 - 0.0033 17.2 0.1 0.0069 16.2 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4505) eRF1_1 PF03463.15 CCF75097.1 - 0.01 15.9 0.2 1.1 9.3 0.0 2.4 2 0 0 2 2 2 0 eRF1 domain 1 Baculo_PEP_C PF04513.12 CCF75098.1 - 4.6e-05 23.5 69.9 0.28 11.2 1.8 10.5 6 4 5 11 11 11 7 Baculovirus polyhedron envelope protein, PEP, C terminus Ribosomal_L17 PF01196.19 CCF75098.1 - 0.053 14.4 0.6 0.55 11.2 0.1 3.0 2 0 0 2 2 2 0 Ribosomal protein L17 MtrB PF05440.12 CCF75098.1 - 0.65 10.5 4.1 72 3.9 0.0 5.3 4 0 0 4 4 4 0 Tetrahydromethanopterin S-methyltransferase subunit B CTD_bind PF04818.13 CCF75098.1 - 0.86 10.5 4.8 1e+02 3.8 0.0 4.7 4 0 0 4 4 4 0 RNA polymerase II-binding domain. Utp12 PF04003.12 CCF75098.1 - 2.6 8.4 6.4 41 4.5 0.0 4.7 4 1 0 4 4 4 0 Dip2/Utp12 Family DUF2383 PF09537.10 CCF75098.1 - 3.4 8.0 18.9 13 6.2 0.2 6.9 7 2 2 9 9 9 0 Domain of unknown function (DUF2383) HALZ PF02183.18 CCF75098.1 - 4 7.8 11.2 0.54 10.5 1.0 5.0 5 1 0 5 5 5 0 Homeobox associated leucine zipper Img2 PF05046.14 CCF75098.1 - 4.6 7.6 9.7 39 4.6 0.3 4.8 4 1 0 4 4 4 0 Mitochondrial large subunit ribosomal protein (Img2) Bax1-I PF01027.20 CCF75099.1 - 1.7e-20 73.7 30.2 1.9e-20 73.6 30.2 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 PI3_PI4_kinase PF00454.27 CCF75101.1 - 3.4e-30 105.7 2.0 9.3e-21 74.8 1.4 2.6 1 1 1 2 2 2 2 Phosphatidylinositol 3- and 4-kinase PI3Ka PF00613.20 CCF75101.1 - 3.5e-15 55.9 0.1 7.9e-15 54.7 0.1 1.5 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) DUF272 PF03312.15 CCF75101.1 - 0.016 15.4 0.1 0.61 10.3 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF272) GLE1 PF07817.13 CCF75102.1 - 1.6e-10 40.6 0.6 7e-05 22.2 0.2 2.5 2 0 0 2 2 2 2 GLE1-like protein SPO22 PF08631.10 CCF75102.1 - 0.084 12.4 1.7 0.19 11.2 0.7 1.9 2 0 0 2 2 2 0 Meiosis protein SPO22/ZIP4 like PPR_3 PF13812.6 CCF75102.1 - 0.1 12.7 2.3 0.16 12.1 0.3 2.5 2 0 0 2 2 2 0 Pentatricopeptide repeat domain DnaJ_C PF01556.18 CCF75103.1 - 1.7e-31 109.3 0.0 2.3e-31 108.9 0.0 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 CCF75103.1 - 4.2e-20 71.6 3.1 6.8e-20 71.0 3.1 1.3 1 0 0 1 1 1 1 DnaJ domain ORC2 PF04084.14 CCF75104.1 - 1.2e-29 103.3 0.5 1.6e-29 102.9 0.5 1.2 1 0 0 1 1 1 1 Origin recognition complex subunit 2 PAP_central PF04928.17 CCF75105.1 - 1.3e-94 315.8 0.0 1.7e-94 315.5 0.0 1.1 1 0 0 1 1 1 1 Poly(A) polymerase central domain PAP_RNA-bind PF04926.15 CCF75105.1 - 1.5e-23 83.3 1.8 3.7e-13 49.5 0.1 2.3 1 1 1 2 2 2 2 Poly(A) polymerase predicted RNA binding domain NTP_transf_2 PF01909.23 CCF75105.1 - 1.3e-06 28.6 0.0 4.8e-06 26.8 0.0 2.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain Nrap_D2 PF17403.2 CCF75105.1 - 0.00068 19.4 0.2 0.0017 18.2 0.2 1.7 1 1 0 1 1 1 1 Nrap protein PAP/OAS-like domain Polbeta PF18765.1 CCF75105.1 - 0.093 12.8 0.3 0.71 10.0 0.0 2.4 2 1 0 3 3 3 0 Polymerase beta, Nucleotidyltransferase Brix PF04427.18 CCF75107.1 - 6e-27 95.0 0.3 9e-27 94.4 0.3 1.3 1 0 0 1 1 1 1 Brix domain YmcE_antitoxin PF15939.5 CCF75107.1 - 0.1 12.8 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system Exo5 PF09810.9 CCF75108.1 - 2.2e-44 152.5 24.5 5.2e-27 95.3 1.9 3.7 2 1 2 4 4 4 3 Exonuclease V - a 5' deoxyribonuclease PDDEXK_1 PF12705.7 CCF75108.1 - 2.5e-05 24.3 0.2 7e-05 22.9 0.2 1.7 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Kelch_4 PF13418.6 CCF75109.1 - 7.9e-31 105.8 15.5 3e-09 36.8 0.5 5.5 5 0 0 5 5 5 5 Galactose oxidase, central domain Kelch_6 PF13964.6 CCF75109.1 - 6.9e-23 80.1 14.2 9.7e-07 28.9 0.1 5.5 4 1 1 5 5 5 5 Kelch motif Kelch_1 PF01344.25 CCF75109.1 - 8.6e-23 79.7 2.6 1.3e-05 24.7 0.1 5.7 5 0 0 5 5 5 5 Kelch motif Kelch_5 PF13854.6 CCF75109.1 - 5e-22 77.4 16.4 3.4e-08 33.3 0.1 6.5 6 0 0 6 6 6 5 Kelch motif Kelch_2 PF07646.15 CCF75109.1 - 2.7e-15 55.6 11.4 0.013 15.5 0.0 5.7 5 0 0 5 5 5 5 Kelch motif Kelch_3 PF13415.6 CCF75109.1 - 2.9e-13 49.7 14.1 0.00079 19.6 0.3 5.5 4 1 1 5 5 5 5 Galactose oxidase, central domain EGF_2 PF07974.13 CCF75109.1 - 0.2 12.1 13.7 0.37 11.2 13.7 1.5 1 0 0 1 1 1 0 EGF-like domain Sin_N PF04801.13 CCF75110.1 - 3.6e-26 92.3 1.1 3.7e-19 69.3 0.0 2.9 1 1 1 2 2 2 2 Sin-like protein conserved region DEAD PF00270.29 CCF75112.1 - 2.9e-30 105.3 0.0 7.4e-30 104.0 0.0 1.7 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF75112.1 - 2e-22 79.6 0.1 6.4e-22 78.0 0.0 1.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF75112.1 - 7e-05 22.9 0.0 0.0012 18.9 0.0 2.3 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_lid_11 PF18198.1 CCF75112.1 - 0.016 15.0 0.1 0.089 12.6 0.0 2.1 2 0 0 2 2 2 0 Dynein heavy chain AAA lid domain RsgA_GTPase PF03193.16 CCF75113.1 - 1.6e-10 41.1 0.0 2.8e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase MMR_HSR1 PF01926.23 CCF75113.1 - 3.6e-09 36.7 1.0 1.1e-08 35.2 0.2 2.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 CCF75113.1 - 0.00011 21.8 0.0 0.29 10.6 0.0 2.6 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 CCF75113.1 - 0.00019 21.0 1.4 0.22 11.0 0.0 2.6 2 1 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF75113.1 - 0.017 15.2 3.6 1.1 9.3 0.1 3.2 3 0 0 3 3 3 0 Dynamin family Spore_IV_A PF09547.10 CCF75113.1 - 0.021 13.8 0.1 0.034 13.1 0.1 1.2 1 0 0 1 1 1 0 Stage IV sporulation protein A (spore_IV_A) Roc PF08477.13 CCF75113.1 - 0.22 11.8 0.3 0.88 9.8 0.1 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Pkinase PF00069.25 CCF75114.1 - 1.2e-33 116.7 0.0 4.4e-24 85.3 0.0 3.1 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75114.1 - 9.6e-17 61.1 0.0 8.3e-09 35.1 0.0 3.2 3 0 0 3 3 3 3 Protein tyrosine kinase Securin PF04856.13 CCF75114.1 - 0.0014 18.6 1.8 0.0033 17.4 1.8 1.5 1 0 0 1 1 1 1 Securin sister-chromatid separation inhibitor Kinase-like PF14531.6 CCF75114.1 - 0.004 16.5 0.0 0.012 14.9 0.0 1.7 2 0 0 2 2 2 1 Kinase-like APH PF01636.23 CCF75114.1 - 0.062 13.2 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family SF1-HH PF16275.5 CCF75115.1 - 4.1e-27 94.7 1.8 5.1e-27 94.4 0.0 2.1 3 0 0 3 3 3 1 Splicing factor 1 helix-hairpin domain KH_1 PF00013.29 CCF75115.1 - 5.3e-07 29.4 0.1 1.1e-06 28.3 0.1 1.5 1 0 0 1 1 1 1 KH domain zf-CCHC_3 PF13917.6 CCF75115.1 - 4.9e-05 23.2 2.4 0.04 13.9 0.3 2.5 1 1 1 2 2 2 2 Zinc knuckle zf-CCHC PF00098.23 CCF75115.1 - 0.00014 21.7 7.3 0.1 12.7 1.2 2.4 2 0 0 2 2 2 2 Zinc knuckle STI1 PF17830.1 CCF75115.1 - 0.00022 21.1 4.1 0.00027 20.8 2.8 1.8 2 0 0 2 2 2 1 STI1 domain zf-CCHC_4 PF14392.6 CCF75115.1 - 0.00043 20.0 2.4 0.098 12.4 0.1 2.5 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_6 PF15288.6 CCF75115.1 - 0.22 11.4 4.5 5.7 6.9 0.2 2.5 2 0 0 2 2 2 0 Zinc knuckle CpXC PF14353.6 CCF75115.1 - 0.49 10.5 2.1 16 5.6 2.1 2.6 1 1 0 1 1 1 0 CpXC protein zf-nanos PF05741.13 CCF75115.1 - 2 8.7 4.2 3.9 7.8 0.3 2.5 2 0 0 2 2 2 0 Nanos RNA binding domain DUF5390 PF17365.2 CCF75115.1 - 2.3 8.5 8.0 4.6 7.5 8.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5390) Helicase_C PF00271.31 CCF75116.1 - 3.1e-11 43.6 0.2 3.6e-10 40.1 0.0 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain SUV3_C PF12513.8 CCF75116.1 - 5.9e-05 22.9 0.4 0.00013 21.8 0.4 1.6 1 0 0 1 1 1 1 Mitochondrial degradasome RNA helicase subunit C terminal DUF3685 PF12452.8 CCF75116.1 - 0.35 10.5 1.7 0.76 9.5 1.7 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3685) RNase_HII PF01351.18 CCF75117.1 - 4.8e-51 173.4 0.0 5.6e-51 173.2 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII HNHc_6 PF16784.5 CCF75117.1 - 0.0042 16.7 0.1 0.007 16.0 0.1 1.3 1 0 0 1 1 1 1 Putative HNHc nuclease AKAP7_NLS PF10469.9 CCF75118.1 - 2.2e-06 27.7 1.7 4.9e-06 26.6 1.7 1.7 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain LigT_PEase PF02834.16 CCF75118.1 - 0.0015 18.7 0.0 0.12 12.5 0.0 2.3 2 0 0 2 2 2 2 LigT like Phosphoesterase DUF3883 PF13020.6 CCF75119.1 - 8.9e-23 80.2 0.3 2.3e-22 78.9 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF3883) SWIM PF04434.17 CCF75119.1 - 0.0074 15.9 2.5 0.016 14.8 2.5 1.6 1 0 0 1 1 1 1 SWIM zinc finger Paf67 PF10255.9 CCF75120.1 - 7e-131 437.0 14.7 8.3e-131 436.7 14.7 1.1 1 0 0 1 1 1 1 RNA polymerase I-associated factor PAF67 Hexokinase_1 PF00349.21 CCF75121.1 - 2.8e-50 171.0 0.0 3.7e-50 170.6 0.0 1.1 1 0 0 1 1 1 1 Hexokinase Hexokinase_2 PF03727.16 CCF75121.1 - 4.6e-47 160.5 0.0 6.8e-47 159.9 0.0 1.3 1 0 0 1 1 1 1 Hexokinase Beta-APP PF03494.13 CCF75121.1 - 0.17 11.7 1.4 1.6 8.6 0.5 2.7 2 0 0 2 2 2 0 Beta-amyloid peptide (beta-APP) CPW_WPC PF09717.10 CCF75123.1 - 6.7e-14 52.6 3.8 1.1e-13 51.9 3.8 1.4 1 0 0 1 1 1 1 Plasmodium falciparum domain of unknown function (CPW_WPC) DUF4372 PF14294.6 CCF75125.1 - 0.11 12.6 0.2 0.28 11.3 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) Myb_DNA-bind_7 PF15963.5 CCF75125.1 - 0.23 11.4 1.6 0.61 10.0 0.2 2.5 2 0 0 2 2 2 0 Myb DNA-binding like Nodulin_late PF07127.11 CCF75125.1 - 0.45 10.9 4.4 0.14 12.5 1.2 1.9 2 0 0 2 2 2 0 Late nodulin protein Prefoldin PF02996.17 CCF75126.1 - 2.6e-19 69.3 0.0 3.6e-19 68.8 0.0 1.3 1 0 0 1 1 1 1 Prefoldin subunit E2F_TDP PF02319.20 CCF75126.1 - 0.13 12.3 0.1 0.69 10.0 0.0 2.1 2 1 0 2 2 2 0 E2F/DP family winged-helix DNA-binding domain p25-alpha PF05517.12 CCF75127.1 - 3.2e-17 63.1 0.1 3.8e-17 62.9 0.1 1.0 1 0 0 1 1 1 1 p25-alpha OSCP PF00213.18 CCF75128.1 - 5.7e-28 98.2 4.1 8.4e-28 97.6 4.1 1.3 1 1 0 1 1 1 1 ATP synthase delta (OSCP) subunit HSP90 PF00183.18 CCF75129.1 - 2.7e-134 448.9 11.0 5.4e-134 447.9 11.0 1.5 1 0 0 1 1 1 1 Hsp90 protein AP2 PF00847.20 CCF75129.1 - 1.1e-12 48.0 0.3 2.9e-12 46.6 0.3 1.8 1 0 0 1 1 1 1 AP2 domain HATPase_c PF02518.26 CCF75129.1 - 7.6e-11 42.5 0.1 1.9e-10 41.2 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 CCF75129.1 - 4.5e-09 36.2 0.1 1.2e-08 34.8 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACDC PF14733.6 CCF75129.1 - 0.00016 21.9 4.8 0.00089 19.5 4.8 2.4 1 0 0 1 1 1 1 AP2-coincident C-terminal ORF6C PF10552.9 CCF75129.1 - 0.058 13.5 0.8 5.1 7.2 0.2 3.0 2 0 0 2 2 2 0 ORF6C domain Fumble PF03630.14 CCF75130.1 - 2.6e-19 69.6 0.3 3.3e-19 69.2 0.3 1.2 1 0 0 1 1 1 1 Fumble SNF2_N PF00176.23 CCF75131.1 - 5.2e-69 232.6 0.9 1.3e-68 231.2 0.0 1.9 2 0 0 2 2 2 1 SNF2 family N-terminal domain SLIDE PF09111.10 CCF75131.1 - 1.9e-20 73.0 0.4 7.3e-20 71.1 0.4 2.1 1 0 0 1 1 1 1 SLIDE Helicase_C PF00271.31 CCF75131.1 - 3.8e-17 62.6 0.0 1.3e-16 61.0 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF75131.1 - 1e-09 38.6 0.0 1.4e-08 34.9 0.0 2.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.8 CCF75131.1 - 5.4e-06 25.8 0.0 1.1e-05 24.8 0.0 1.5 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.29 CCF75131.1 - 1e-05 25.4 0.0 3.5e-05 23.6 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase SWI2_SNF2 PF18766.1 CCF75131.1 - 0.023 14.4 0.0 0.059 13.0 0.0 1.7 1 0 0 1 1 1 0 SWI2/SNF2 ATPase SRR1 PF07985.12 CCF75133.1 - 0.0093 16.0 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 SRR1 AAA PF00004.29 CCF75134.1 - 1.1e-89 297.7 0.0 6.3e-46 156.1 0.0 3.5 3 0 0 3 3 3 3 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 CCF75134.1 - 5.3e-26 90.2 0.5 1.5e-12 47.1 0.2 2.7 2 0 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 CCF75134.1 - 8.5e-19 67.5 0.1 2.5e-18 66.0 0.1 1.9 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain RuvB_N PF05496.12 CCF75134.1 - 7.3e-13 48.6 0.0 1.2e-05 25.1 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CCF75134.1 - 9.4e-13 48.9 0.0 0.00031 21.2 0.0 4.2 3 1 0 3 3 3 2 AAA ATPase domain AAA_33 PF13671.6 CCF75134.1 - 6.3e-11 42.6 0.0 3.9e-05 23.8 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_2 PF07724.14 CCF75134.1 - 7.1e-11 42.5 0.0 2.5e-06 27.7 0.0 2.9 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 CCF75134.1 - 2.5e-10 40.8 0.1 0.029 14.6 0.0 4.6 3 2 0 3 3 3 2 AAA domain AAA_5 PF07728.14 CCF75134.1 - 1.1e-09 38.4 0.1 8.5e-05 22.6 0.0 3.2 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 CCF75134.1 - 3e-08 33.3 0.0 0.0012 18.1 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain CDC48_2 PF02933.17 CCF75134.1 - 9.6e-08 31.7 0.0 2.2e-07 30.6 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_18 PF13238.6 CCF75134.1 - 4.2e-07 30.6 0.0 0.042 14.4 0.0 2.8 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 CCF75134.1 - 8e-07 28.6 0.2 0.037 13.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 CCF75134.1 - 1.1e-06 29.0 0.0 0.027 14.9 0.0 3.1 3 0 0 3 3 3 2 RNA helicase AAA_25 PF13481.6 CCF75134.1 - 2.8e-06 27.1 0.2 0.82 9.2 0.0 3.6 2 1 1 3 3 3 1 AAA domain AAA_14 PF13173.6 CCF75134.1 - 6.9e-06 26.1 0.0 0.0028 17.7 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_24 PF13479.6 CCF75134.1 - 9.1e-06 25.5 0.1 0.19 11.5 0.0 3.4 3 0 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 CCF75134.1 - 1.6e-05 24.7 0.0 0.18 11.5 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_17 PF13207.6 CCF75134.1 - 3.8e-05 24.1 0.3 0.31 11.5 0.0 3.2 3 0 0 3 3 3 2 AAA domain ABC_tran PF00005.27 CCF75134.1 - 4e-05 24.1 0.0 0.3 11.6 0.0 3.4 2 1 0 2 2 2 2 ABC transporter AAA_7 PF12775.7 CCF75134.1 - 7.7e-05 22.3 0.0 0.36 10.3 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region ATPase PF06745.13 CCF75134.1 - 8.2e-05 22.0 0.1 2.5 7.4 0.0 3.3 3 0 0 3 3 3 1 KaiC NACHT PF05729.12 CCF75134.1 - 8.9e-05 22.5 0.0 0.38 10.6 0.0 3.4 3 1 0 3 3 2 2 NACHT domain ATPase_2 PF01637.18 CCF75134.1 - 0.0001 22.3 0.0 0.94 9.3 0.0 3.0 2 1 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_28 PF13521.6 CCF75134.1 - 0.0001 22.6 0.0 0.46 10.7 0.0 2.5 2 0 0 2 2 2 2 AAA domain TsaE PF02367.17 CCF75134.1 - 0.00021 21.3 0.0 1 9.4 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Parvo_NS1 PF01057.17 CCF75134.1 - 0.00034 19.8 0.0 0.55 9.3 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 NB-ARC PF00931.22 CCF75134.1 - 0.00055 19.2 0.0 0.92 8.6 0.0 2.4 2 0 0 2 2 2 2 NB-ARC domain Sigma54_activat PF00158.26 CCF75134.1 - 0.00075 19.2 0.0 1.2 8.8 0.0 3.2 2 1 0 2 2 2 1 Sigma-54 interaction domain Vps4_C PF09336.10 CCF75134.1 - 0.00075 19.4 0.8 0.0055 16.7 0.1 2.4 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain Zeta_toxin PF06414.12 CCF75134.1 - 0.00076 18.8 0.0 0.7 9.1 0.0 2.6 2 0 0 2 2 2 1 Zeta toxin Viral_helicase1 PF01443.18 CCF75134.1 - 0.0025 17.6 0.0 0.36 10.5 0.0 2.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase PhoH PF02562.16 CCF75134.1 - 0.0026 17.2 0.1 2 7.9 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein DUF815 PF05673.13 CCF75134.1 - 0.0033 16.6 0.0 0.76 8.9 0.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_3 PF07726.11 CCF75134.1 - 0.0035 17.2 0.0 3.2 7.6 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 CCF75134.1 - 0.0036 17.2 0.0 1.6 8.5 0.0 2.4 2 0 0 2 2 2 1 Bacterial dnaA protein DUF2075 PF09848.9 CCF75134.1 - 0.0074 15.6 0.0 0.74 9.0 0.0 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 CCF75134.1 - 0.0077 16.3 0.0 0.29 11.1 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Sigma54_activ_2 PF14532.6 CCF75134.1 - 0.0099 16.0 0.0 1.2 9.2 0.0 2.5 2 0 0 2 2 2 1 Sigma-54 interaction domain Rad17 PF03215.15 CCF75134.1 - 0.011 15.6 0.0 1.8 8.5 0.0 2.7 2 1 0 2 2 2 0 Rad17 P-loop domain AAA_19 PF13245.6 CCF75134.1 - 0.015 15.6 1.1 6.6 7.1 0.1 3.4 3 1 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 CCF75134.1 - 0.026 14.5 0.1 13 5.7 0.0 3.5 3 0 0 3 3 3 0 NTPase AAA_30 PF13604.6 CCF75134.1 - 0.033 13.9 0.1 7.4 6.2 0.1 2.5 2 0 0 2 2 2 0 AAA domain Cytidylate_kin PF02224.18 CCF75134.1 - 0.038 13.7 0.1 7.4 6.2 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase AAA_11 PF13086.6 CCF75134.1 - 0.042 13.6 0.0 11 5.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain Cytidylate_kin2 PF13189.6 CCF75134.1 - 0.049 13.8 0.0 5.6 7.1 0.0 2.6 2 0 0 2 2 2 0 Cytidylate kinase-like family AAA_29 PF13555.6 CCF75134.1 - 0.058 13.2 0.0 7.3 6.4 0.0 2.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain SKI PF01202.22 CCF75134.1 - 0.083 13.0 0.1 19 5.4 0.0 2.5 2 0 0 2 2 2 0 Shikimate kinase F-box-like PF12937.7 CCF75135.1 - 0.015 15.2 0.1 0.035 14.0 0.1 1.5 1 0 0 1 1 1 0 F-box-like F-box PF00646.33 CCF75135.1 - 0.035 14.0 0.1 0.086 12.7 0.1 1.6 1 0 0 1 1 1 0 F-box domain GCV_T PF01571.21 CCF75138.1 - 6.2e-06 25.8 0.0 9.8e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain MA3 PF02847.17 CCF75138.1 - 0.22 11.5 2.2 1 9.4 0.2 3.0 4 0 0 4 4 4 0 MA3 domain LRR_4 PF12799.7 CCF75139.1 - 2.7e-26 91.2 85.2 4.3e-08 33.3 4.7 5.9 1 1 8 9 9 9 9 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 CCF75139.1 - 2.1e-14 53.0 68.3 2.7e-05 23.8 1.1 5.7 1 1 6 7 7 7 7 Leucine rich repeat LRR_9 PF14580.6 CCF75139.1 - 3.5e-09 36.4 15.4 4.2e-05 23.1 0.7 3.0 1 1 2 3 3 3 2 Leucine-rich repeat LRR_6 PF13516.6 CCF75139.1 - 0.0011 18.9 35.8 7.4 6.9 0.1 8.5 9 0 0 9 9 9 4 Leucine Rich repeat LRR_1 PF00560.33 CCF75139.1 - 0.016 15.7 34.2 3.5 8.5 0.7 8.1 8 1 0 8 8 8 0 Leucine Rich Repeat Toxin_R_bind_C PF07951.12 CCF75139.1 - 0.14 11.8 3.9 0.094 12.4 2.1 1.6 2 0 0 2 2 2 0 Clostridium neurotoxin, C-terminal receptor binding CLAG PF03805.13 CCF75140.1 - 6.4e-13 47.3 5.6 7.5e-06 23.9 3.5 2.3 2 0 0 2 2 2 2 Cytoadherence-linked asexual protein Nod1 PF17114.5 CCF75140.1 - 0.12 12.6 0.3 4.8 7.3 0.0 2.7 2 0 0 2 2 2 0 Gef2-related medial cortical node protein Nod1 Defensin_2 PF01097.18 CCF75140.1 - 0.13 12.2 0.2 0.24 11.4 0.2 1.4 1 0 0 1 1 1 0 Arthropod defensin RIBIOP_C PF04950.12 CCF75141.1 - 2e-79 267.0 0.3 3e-79 266.5 0.3 1.3 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal AARP2CN PF08142.12 CCF75141.1 - 1e-14 54.4 0.1 3.1e-14 52.8 0.1 1.9 1 1 0 1 1 1 1 AARP2CN (NUC121) domain Sortilin-Vps10 PF15902.5 CCF75142.1 - 3.3e-95 319.5 9.4 6.2e-93 312.0 7.0 2.3 2 1 0 2 2 2 2 Sortilin, neurotensin receptor 3, Sortilin_C PF15901.5 CCF75142.1 - 9.1e-38 130.3 0.5 1.5e-37 129.6 0.5 1.3 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal BNR_3 PF13859.6 CCF75142.1 - 0.012 14.9 0.0 0.34 10.2 0.0 2.4 2 0 0 2 2 2 0 BNR repeat-like domain EF-hand_7 PF13499.6 CCF75143.1 - 2.9e-21 75.7 3.3 1.7e-11 44.4 0.3 2.7 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 CCF75143.1 - 1.8e-20 70.9 6.8 9.8e-06 24.8 0.3 4.4 4 0 0 4 4 4 4 EF hand EF-hand_5 PF13202.6 CCF75143.1 - 1.1e-17 62.6 11.1 2e-06 27.0 0.4 4.4 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 CCF75143.1 - 2.5e-15 55.0 6.6 0.0078 16.1 0.0 4.4 4 0 0 4 4 4 4 EF-hand domain SPARC_Ca_bdg PF10591.9 CCF75143.1 - 3.3e-08 33.8 0.3 0.00013 22.2 0.1 2.5 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_8 PF13833.6 CCF75143.1 - 5.8e-08 32.5 11.2 0.018 14.9 1.8 4.4 3 2 2 5 5 5 3 EF-hand domain pair EF-hand_9 PF14658.6 CCF75143.1 - 0.0073 16.6 0.0 1.4 9.3 0.0 2.9 3 0 0 3 3 3 1 EF-hand domain Caleosin PF05042.13 CCF75143.1 - 0.013 15.5 1.4 6.6 6.6 0.1 3.6 2 2 2 4 4 4 0 Caleosin related protein Copper-fist PF00649.18 CCF75143.1 - 0.22 11.0 0.1 0.51 9.9 0.1 1.6 1 0 0 1 1 1 0 Copper fist DNA binding domain Dockerin_1 PF00404.18 CCF75143.1 - 0.67 10.2 11.9 1.2 9.3 0.4 3.5 2 2 1 3 3 3 0 Dockerin type I domain LSM PF01423.22 CCF75144.1 - 1.9e-13 49.9 0.0 2.4e-13 49.6 0.0 1.1 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 CCF75144.1 - 0.003 17.1 0.0 0.0045 16.6 0.0 1.3 1 0 0 1 1 1 1 Hfq protein LepB_GAP_N PF18172.1 CCF75144.1 - 0.014 15.3 0.0 0.016 15.1 0.0 1.1 1 0 0 1 1 1 0 LepB GAP domain N-terminal subdomain ApoLp-III PF07464.11 CCF75145.1 - 0.037 14.1 0.1 0.074 13.2 0.1 1.6 1 1 0 1 1 1 0 Apolipophorin-III precursor (apoLp-III) T3SS_ATPase_C PF18269.1 CCF75145.1 - 0.098 12.5 0.0 0.27 11.1 0.0 1.8 1 0 0 1 1 1 0 T3SS EscN ATPase C-terminal domain Trp_halogenase PF04820.14 CCF75145.1 - 0.18 10.7 0.0 0.33 9.7 0.0 1.4 2 0 0 2 2 2 0 Tryptophan halogenase TBCC_N PF16752.5 CCF75145.1 - 0.19 12.2 1.9 4.5 7.7 0.1 2.6 2 1 1 3 3 3 0 Tubulin-specific chaperone C N-terminal domain ERCC4 PF02732.15 CCF75147.1 - 3.9e-21 75.9 0.0 9e-21 74.7 0.0 1.7 1 0 0 1 1 1 1 ERCC4 domain RE_ApaLI PF09499.10 CCF75147.1 - 0.082 12.6 0.2 1.8 8.2 0.0 2.4 2 0 0 2 2 2 0 ApaLI-like restriction endonuclease Xpo1 PF08389.12 CCF75148.1 - 5.6e-09 36.2 3.4 5.6e-09 36.2 3.4 3.2 3 0 0 3 3 3 1 Exportin 1-like protein TFIIB PF00382.19 CCF75149.1 - 9.4e-24 83.3 0.1 8.7e-11 41.7 0.0 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat BRF1 PF07741.13 CCF75149.1 - 6e-14 52.2 1.5 1.2e-13 51.2 1.5 1.5 1 0 0 1 1 1 1 Brf1-like TBP-binding domain TF_Zn_Ribbon PF08271.12 CCF75149.1 - 0.00014 21.3 3.2 0.00051 19.5 3.2 2.0 1 0 0 1 1 1 1 TFIIB zinc-binding DUF16 PF01519.16 CCF75150.1 - 0.043 14.3 7.3 2.1 8.9 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function DUF16 Syntaxin_2 PF14523.6 CCF75150.1 - 0.046 14.1 9.9 2 8.9 1.0 3.3 2 1 1 3 3 3 0 Syntaxin-like protein CEP63 PF17045.5 CCF75150.1 - 0.075 12.9 1.4 0.12 12.3 0.6 1.7 1 1 1 2 2 2 0 Centrosomal protein of 63 kDa Allexi_40kDa PF05549.11 CCF75150.1 - 0.67 9.4 5.6 0.89 9.0 1.0 2.2 2 0 0 2 2 2 0 Allexivirus 40kDa protein DASH_Duo1 PF08651.10 CCF75150.1 - 1.5 8.7 12.8 3.4 7.5 0.2 3.9 2 1 1 4 4 4 0 DASH complex subunit Duo1 LPP PF04728.13 CCF75150.1 - 2.3 8.7 5.3 16 6.0 0.1 3.2 3 0 0 3 3 3 0 Lipoprotein leucine-zipper Patatin PF01734.22 CCF75151.1 - 0.00027 21.2 0.3 0.022 14.9 0.3 2.6 1 1 0 1 1 1 1 Patatin-like phospholipase EF-hand_6 PF13405.6 CCF75153.1 - 0.00052 19.7 0.2 0.011 15.6 0.0 2.4 2 0 0 2 2 2 1 EF-hand domain EF-hand_9 PF14658.6 CCF75153.1 - 0.0087 16.4 0.0 0.028 14.7 0.0 1.8 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 CCF75153.1 - 0.052 14.0 0.0 0.13 12.8 0.0 1.7 1 1 1 2 2 2 0 EF-hand domain pair EF-hand_1 PF00036.32 CCF75153.1 - 0.08 12.5 0.2 0.3 10.7 0.0 2.1 2 0 0 2 2 2 0 EF hand Imm47 PF15573.6 CCF75153.1 - 0.11 12.0 0.8 0.54 9.7 0.1 2.0 1 1 1 2 2 2 0 Immunity protein 47 zf-C3HC4_3 PF13920.6 CCF75154.1 - 1.5e-11 44.0 5.5 2.4e-11 43.3 5.5 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF75154.1 - 4.5e-11 42.4 7.1 8.2e-11 41.6 7.1 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 CCF75154.1 - 6.4e-11 41.9 7.7 1.1e-10 41.2 7.7 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF75154.1 - 2.3e-09 37.0 6.0 4e-09 36.2 6.0 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 CCF75154.1 - 2.5e-09 37.3 8.6 4.4e-09 36.5 8.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 CCF75154.1 - 6.7e-09 35.6 1.8 6.7e-09 35.6 1.8 2.3 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 CCF75154.1 - 9.5e-09 35.1 5.7 1.7e-08 34.2 5.7 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_4 PF15227.6 CCF75154.1 - 3.3e-06 27.1 7.3 5.9e-06 26.3 7.3 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 CCF75154.1 - 8.8e-05 22.7 10.2 0.00017 21.8 10.2 1.5 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-P11 PF03854.14 CCF75154.1 - 0.011 15.3 9.2 0.011 15.3 9.2 1.8 1 1 1 2 2 2 0 P-11 zinc finger zf-RING_6 PF14835.6 CCF75154.1 - 0.016 15.0 6.6 0.04 13.8 4.9 2.2 2 0 0 2 2 2 0 zf-RING of BARD1-type protein zf-ANAPC11 PF12861.7 CCF75154.1 - 0.022 14.8 4.3 0.035 14.2 4.3 1.3 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger IBR PF01485.21 CCF75154.1 - 0.036 14.3 11.7 0.036 14.3 11.7 1.8 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain Rtf2 PF04641.12 CCF75154.1 - 0.059 12.7 1.8 0.077 12.3 1.8 1.2 1 0 0 1 1 1 0 Rtf2 RING-finger zf-UDP PF14569.6 CCF75154.1 - 0.06 13.5 3.4 0.21 11.7 3.4 1.9 1 1 0 1 1 1 0 Zinc-binding RING-finger Ammonium_transp PF00909.21 CCF75154.1 - 0.1 11.3 1.5 0.12 11.0 1.5 1.0 1 0 0 1 1 1 0 Ammonium Transporter Family Zn_ribbon_17 PF17120.5 CCF75154.1 - 0.18 11.4 6.9 0.34 10.6 6.9 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 CCF75154.1 - 0.6 9.9 8.3 0.43 10.4 3.8 2.4 2 0 0 2 2 2 0 RING-like zinc finger zf-RING_4 PF14570.6 CCF75154.1 - 0.62 9.9 12.7 0.82 9.5 9.0 2.2 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain Baculo_IE-1 PF05290.11 CCF75154.1 - 0.7 9.8 6.4 1.2 9.1 6.4 1.3 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) S-AdoMet_synt_C PF02773.16 CCF75155.1 - 4.6e-56 188.6 0.0 1e-55 187.5 0.0 1.6 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 CCF75155.1 - 2.7e-42 143.8 0.0 7.9e-42 142.3 0.0 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 CCF75155.1 - 4.3e-42 142.8 0.8 7.9e-42 142.0 0.8 1.5 1 0 0 1 1 1 1 S-adenosylmethionine synthetase, N-terminal domain VirE1 PF12189.8 CCF75155.1 - 0.15 12.2 0.1 0.74 10.0 0.0 2.1 2 0 0 2 2 2 0 Single-strand DNA-binding protein NAD_kinase PF01513.21 CCF75156.1 - 2.8e-55 187.6 0.1 3.7e-55 187.2 0.1 1.2 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 CCF75156.1 - 0.00045 19.8 0.1 0.0012 18.5 0.0 1.7 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain Glyco_hydro_67N PF03648.14 CCF75156.1 - 0.092 13.0 0.0 0.64 10.3 0.0 2.1 1 1 1 2 2 2 0 Glycosyl hydrolase family 67 N-terminus DUF4444 PF14563.6 CCF75157.1 - 5.6 6.7 5.9 5.7 6.7 0.0 3.3 4 0 0 4 4 4 0 Domain of unknown function (DUF4444) SNF PF00209.18 CCF75158.1 - 1e-13 50.9 27.4 1e-13 50.9 27.4 2.1 1 1 0 2 2 2 1 Sodium:neurotransmitter symporter family SLATT_1 PF18181.1 CCF75158.1 - 4.9 7.1 5.9 1.5 8.8 0.4 2.4 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 SecE PF00584.20 CCF75159.1 - 2e-11 43.6 0.1 2.4e-11 43.4 0.1 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex DUF2481 PF10654.9 CCF75159.1 - 0.11 12.5 0.1 0.14 12.2 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2481) Ribosomal_L37ae PF01780.19 CCF75160.1 - 7.1e-38 128.6 6.1 8.1e-38 128.4 6.1 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family RPA_interact_C PF14768.6 CCF75160.1 - 0.024 15.2 0.4 0.036 14.6 0.4 1.4 1 0 0 1 1 1 0 Replication protein A interacting C-terminal Zn_Tnp_IS1595 PF12760.7 CCF75160.1 - 0.18 11.8 4.4 0.28 11.2 4.4 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain PITH PF06201.13 CCF75161.1 - 4.9e-18 65.8 0.2 6.5e-18 65.4 0.2 1.2 1 0 0 1 1 1 1 PITH domain DEAD PF00270.29 CCF75162.1 - 1.1e-35 123.0 0.1 1.8e-35 122.2 0.1 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF75162.1 - 1.5e-27 96.2 0.4 2.7e-26 92.1 0.2 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF75162.1 - 0.00052 20.1 0.0 0.001 19.1 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 CCF75162.1 - 0.0067 15.8 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 U3-containing 90S pre-ribosomal complex subunit MFS_1 PF07690.16 CCF75163.1 - 3e-09 36.3 19.6 8.9e-07 28.1 1.0 3.4 3 0 0 3 3 3 3 Major Facilitator Superfamily Sugar_tr PF00083.24 CCF75163.1 - 0.0001 21.3 6.2 0.0001 21.3 6.2 2.5 2 1 0 2 2 2 1 Sugar (and other) transporter E1-E2_ATPase PF00122.20 CCF75164.1 - 1.8e-13 50.5 0.0 1.2e-11 44.4 0.0 3.0 2 0 0 2 2 2 1 E1-E2 ATPase Hydrolase PF00702.26 CCF75164.1 - 5e-13 49.8 0.0 0.00011 22.5 0.0 3.3 3 0 0 3 3 3 3 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 CCF75164.1 - 0.0033 17.1 0.0 0.0033 17.1 0.0 2.3 2 0 0 2 2 2 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 CCF75164.1 - 0.006 16.6 0.0 0.016 15.3 0.0 1.6 1 0 0 1 1 1 1 Cation transport ATPase (P-type) RNA_pol_Rpb1_1 PF04997.12 CCF75165.1 - 5e-106 354.5 0.0 7.8e-106 353.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_5 PF04998.17 CCF75165.1 - 1.2e-102 343.0 0.0 1.7e-102 342.4 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 CCF75165.1 - 2.4e-72 242.6 0.0 4.6e-72 241.6 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_6 PF04992.14 CCF75165.1 - 1.5e-46 158.6 0.2 2.9e-46 157.7 0.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 6 RNA_pol_Rpb1_3 PF04983.18 CCF75165.1 - 2.5e-43 147.7 0.0 6.2e-43 146.5 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_7 PF04990.12 CCF75165.1 - 1.4e-41 141.7 0.0 2.5e-41 140.8 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 7 RNA_pol_Rpb1_4 PF05000.17 CCF75165.1 - 4.7e-36 123.0 0.0 9.2e-36 122.1 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 DUF4270 PF14092.6 CCF75169.1 - 0.073 12.2 0.4 0.081 12.0 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4270) Asn_synthase PF00733.21 CCF75171.1 - 3.6e-70 237.4 0.0 3.7e-40 138.7 0.0 2.0 1 1 1 2 2 2 2 Asparagine synthase GATase_7 PF13537.6 CCF75171.1 - 1.4e-22 79.9 0.0 2.8e-22 78.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 CCF75171.1 - 1.9e-16 60.5 0.0 3.3e-16 59.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain DUF3700 PF12481.8 CCF75171.1 - 0.00042 19.8 0.1 0.00083 18.9 0.1 1.4 1 0 0 1 1 1 1 Aluminium induced protein NAD_synthase PF02540.17 CCF75171.1 - 0.0069 15.5 0.0 0.011 14.8 0.0 1.3 1 0 0 1 1 1 1 NAD synthase QueC PF06508.13 CCF75171.1 - 0.066 12.7 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 Queuosine biosynthesis protein QueC TraD_N PF12615.8 CCF75171.1 - 0.15 12.8 0.1 0.6 10.9 0.1 2.0 1 0 0 1 1 1 0 F sex factor protein N terminal TMIE PF16038.5 CCF75172.1 - 0.2 11.5 2.0 0.93 9.4 0.5 2.2 2 0 0 2 2 2 0 TMIE protein Aconitase PF00330.20 CCF75173.1 - 2e-169 564.5 0.0 2.6e-169 564.1 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 CCF75173.1 - 8.3e-43 145.9 0.0 3.8e-42 143.7 0.0 2.1 2 0 0 2 2 2 1 Aconitase C-terminal domain Ribosomal_L18 PF17135.4 CCF75175.1 - 6.3e-84 280.0 2.2 6.9e-84 279.9 2.2 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 CCF75175.1 - 0.0025 18.5 0.0 0.0025 18.5 0.0 1.8 2 0 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ATP-synt_D PF01813.17 CCF75176.1 - 2e-50 171.4 5.5 2.7e-50 170.9 5.5 1.2 1 0 0 1 1 1 1 ATP synthase subunit D Ribosomal_S6e PF01092.19 CCF75177.1 - 2.4e-50 169.7 1.0 3.3e-50 169.3 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S6e CS PF04969.16 CCF75177.1 - 0.017 16.1 1.6 0.032 15.3 1.6 1.5 1 0 0 1 1 1 0 CS domain RAP PF08373.10 CCF75178.1 - 1.7e-08 34.4 0.0 6.1e-08 32.6 0.0 2.0 1 0 0 1 1 1 1 RAP domain Yos1 PF08571.10 CCF75179.1 - 3.4e-19 68.9 0.8 4.1e-19 68.6 0.8 1.1 1 0 0 1 1 1 1 Yos1-like LRR_4 PF12799.7 CCF75181.1 - 1.5 9.3 5.0 18 5.9 0.5 3.5 3 0 0 3 3 3 0 Leucine Rich repeats (2 copies) Ribosomal_L18A PF01775.17 CCF75183.1 - 9.4e-52 174.2 0.9 1.3e-51 173.7 0.9 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A T3SchapCesA PF11439.8 CCF75184.1 - 0.023 14.8 0.5 0.045 13.9 0.5 1.5 1 0 0 1 1 1 0 Type III secretion system filament chaperone CesA Leo1 PF04004.13 CCF75185.1 - 4.5e-10 39.6 0.1 6.6e-10 39.1 0.1 1.3 1 0 0 1 1 1 1 Leo1-like protein Myb_DNA-binding PF00249.31 CCF75187.1 - 2.5e-10 40.4 0.2 1.5e-07 31.5 0.1 3.3 3 0 0 3 3 3 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF75187.1 - 2.1e-09 37.5 1.1 5.2e-08 33.0 0.6 2.9 3 0 0 3 3 3 1 Myb-like DNA-binding domain MEF2_binding PF09047.10 CCF75187.1 - 0.06 13.2 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 MEF2 binding VHS PF00790.19 CCF75187.1 - 0.081 12.8 0.8 3.1 7.6 0.2 2.9 2 1 1 3 3 3 0 VHS domain MRP-L51 PF10244.9 CCF75187.1 - 0.13 12.5 0.5 4.1 7.7 0.0 2.8 3 0 0 3 3 3 0 Mitochondrial ribosomal subunit AbbA_antirepres PF14156.6 CCF75188.1 - 0.14 12.0 0.2 0.4 10.6 0.2 1.7 1 1 0 1 1 1 0 Antirepressor AbbA MPP6 PF10175.9 CCF75189.1 - 0.00012 22.5 0.1 0.00018 22.0 0.1 1.3 1 1 0 1 1 1 1 M-phase phosphoprotein 6 RAP PF08373.10 CCF75190.1 - 1.9e-11 43.9 0.1 1.9e-11 43.9 0.1 3.3 3 0 0 3 3 3 1 RAP domain MTES_1575 PF18741.1 CCF75190.1 - 1.6e-10 41.0 0.1 2.9e-09 37.0 0.1 2.8 2 1 0 2 2 2 1 REase_MTES_1575 DUF559 PF04480.12 CCF75190.1 - 0.011 15.6 0.0 0.22 11.4 0.0 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF559) tRNA-synt_1c PF00749.21 CCF75191.1 - 5.5e-102 340.9 0.0 8.4e-102 340.3 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 CCF75191.1 - 4.5e-26 91.8 0.2 1.4e-25 90.1 0.0 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain GST_C_3 PF14497.6 CCF75191.1 - 0.052 13.7 0.0 1 9.6 0.0 2.8 3 0 0 3 3 3 0 Glutathione S-transferase, C-terminal domain Ribosomal_L33 PF00471.20 CCF75192.1 - 3.4e-07 30.6 0.7 6.2e-07 29.8 0.2 1.8 2 0 0 2 2 2 1 Ribosomal protein L33 DUF3668 PF12416.8 CCF75192.1 - 0.1 12.4 0.0 5.2 6.8 0.0 2.7 1 1 2 3 3 3 0 Cep120 protein VraX PF17412.2 CCF75194.1 - 0.026 14.2 0.2 0.21 11.2 0.1 2.7 2 0 0 2 2 2 0 Family of unknown function Pox_I5 PF04713.12 CCF75194.1 - 0.5 10.4 2.5 0.42 10.7 0.4 1.9 2 0 0 2 2 2 0 Poxvirus protein I5 DIL PF01843.19 CCF75194.1 - 7.9 6.8 9.0 7.9 6.8 0.4 4.3 2 1 2 4 4 4 0 DIL domain CLASP_N PF12348.8 CCF75195.1 - 0.00021 20.9 3.6 0.00036 20.2 3.6 1.3 1 0 0 1 1 1 1 CLASP N terminal Proteasome PF00227.26 CCF75196.1 - 9.3e-53 178.5 0.0 1.2e-52 178.2 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 CCF75196.1 - 1.9e-12 46.6 0.0 3.7e-12 45.7 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature MAGE PF01454.19 CCF75197.1 - 0.018 14.8 0.0 0.031 14.0 0.0 1.4 1 0 0 1 1 1 0 MAGE family zf-FLZ PF04570.14 CCF75198.1 - 0.16 11.5 2.7 0.12 11.8 0.7 1.8 2 0 0 2 2 2 0 zinc-finger of the FCS-type, C2-C2 YgbB PF02542.16 CCF75199.1 - 1.6e-48 164.9 0.4 2e-48 164.6 0.4 1.1 1 0 0 1 1 1 1 YgbB family WD40 PF00400.32 CCF75203.1 - 0.00018 22.2 1.0 2.7 9.0 0.0 4.8 4 0 0 4 4 4 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75203.1 - 0.0021 18.3 0.0 0.55 10.6 0.0 2.7 1 1 1 2 2 2 2 Anaphase-promoting complex subunit 4 WD40 domain RRM_1 PF00076.22 CCF75204.1 - 8.5e-09 35.1 0.1 0.0038 17.0 0.0 3.6 4 0 0 4 4 4 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FliC_SP PF12613.8 CCF75204.1 - 2.6 8.6 4.4 0.58 10.7 0.3 2.0 2 0 0 2 2 2 0 Flagellin structural protein WD40 PF00400.32 CCF75205.1 - 4.5e-06 27.3 4.9 7.4e-05 23.5 0.7 3.8 4 0 0 4 4 4 1 WD domain, G-beta repeat WD40_like PF17005.5 CCF75205.1 - 0.0016 17.8 5.4 0.0023 17.3 0.4 2.8 1 1 3 4 4 4 1 WD40-like domain PQQ_3 PF13570.6 CCF75205.1 - 0.0052 17.2 0.2 29 5.3 0.0 3.6 3 0 0 3 3 3 2 PQQ-like domain RNA_pol_Rpb5_C PF01191.19 CCF75206.1 - 1.2e-33 114.8 0.7 2.8e-33 113.6 0.2 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 CCF75206.1 - 1.7e-21 76.6 0.2 3.5e-21 75.6 0.1 1.6 2 0 0 2 2 2 1 RNA polymerase Rpb5, N-terminal domain Mrr_cat PF04471.12 CCF75206.1 - 0.03 14.3 0.0 0.081 13.0 0.0 1.7 1 1 0 1 1 1 0 Restriction endonuclease Sof1 PF04158.14 CCF75206.1 - 0.092 13.0 0.3 0.092 13.0 0.3 1.9 2 0 0 2 2 2 0 Sof1-like domain zf-CCCH PF00642.24 CCF75207.1 - 3.1e-09 36.5 23.3 2.6e-05 24.0 4.8 4.0 4 0 0 4 4 4 3 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Torus PF16131.5 CCF75207.1 - 1.1e-06 29.3 11.2 0.00062 20.4 1.2 2.7 1 1 0 2 2 2 2 Torus domain zf-CCCH_2 PF14608.6 CCF75207.1 - 0.0003 21.1 24.1 0.093 13.2 0.4 4.3 4 0 0 4 4 4 3 RNA-binding, Nab2-type zinc finger zf-CCCH_3 PF15663.5 CCF75207.1 - 0.001 19.3 11.2 0.046 13.9 2.9 2.7 1 1 1 2 2 2 2 Zinc-finger containing family zf_CCCH_4 PF18345.1 CCF75207.1 - 0.0014 18.6 6.2 0.0014 18.6 6.2 4.3 4 1 0 4 4 4 2 Zinc finger domain zf-CCCH_4 PF18044.1 CCF75207.1 - 0.0045 16.7 3.3 0.0045 16.7 3.3 3.8 4 0 0 4 4 4 2 CCCH-type zinc finger Protoglobin PF11563.8 CCF75207.1 - 0.16 11.9 0.1 0.26 11.2 0.1 1.2 1 0 0 1 1 1 0 Protoglobin NPL PF17800.1 CCF75208.1 - 6.9e-09 36.2 0.1 6.9e-09 36.2 0.1 2.1 2 1 0 2 2 1 1 Nucleoplasmin-like domain CDC45 PF02724.14 CCF75208.1 - 0.021 13.1 6.1 0.023 13.0 6.1 1.1 1 0 0 1 1 1 0 CDC45-like protein Nucleoplasmin PF03066.15 CCF75208.1 - 0.067 13.7 0.1 0.76 10.3 0.0 2.3 2 0 0 2 2 2 0 Nucleoplasmin/nucleophosmin domain SDA1 PF05285.12 CCF75208.1 - 0.13 11.7 11.3 0.16 11.4 11.3 1.1 1 0 0 1 1 1 0 SDA1 DUF5102 PF17104.5 CCF75208.1 - 0.19 11.8 6.9 0.26 11.3 6.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF5102) Nop14 PF04147.12 CCF75208.1 - 0.2 9.8 10.9 0.27 9.4 10.9 1.1 1 0 0 1 1 1 0 Nop14-like family Sigma70_ner PF04546.13 CCF75208.1 - 0.27 11.1 6.4 0.35 10.7 6.4 1.2 1 0 0 1 1 1 0 Sigma-70, non-essential region YL1 PF05764.13 CCF75208.1 - 0.29 11.2 13.9 0.38 10.8 13.9 1.1 1 0 0 1 1 1 0 YL1 nuclear protein RRN3 PF05327.11 CCF75208.1 - 0.34 9.4 7.5 0.43 9.1 7.5 1.1 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 AIF_C PF14721.6 CCF75208.1 - 0.41 11.0 2.5 0.72 10.2 2.5 1.3 1 0 0 1 1 1 0 Apoptosis-inducing factor, mitochondrion-associated, C-term NOA36 PF06524.12 CCF75208.1 - 0.54 9.5 11.1 0.81 8.9 11.1 1.2 1 0 0 1 1 1 0 NOA36 protein PTPRCAP PF15713.5 CCF75208.1 - 2.5 8.4 10.1 3.7 7.8 10.1 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated Ribosomal_S17 PF00366.20 CCF75209.1 - 8.5e-15 54.6 0.1 1.3e-14 54.0 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein S17 DUF2040 PF09745.9 CCF75210.1 - 1.4e-09 38.0 9.7 2.9e-09 37.0 9.7 1.4 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 55 (DUF2040) Arm PF00514.23 CCF75211.1 - 5.2e-74 242.3 17.8 2.2e-12 46.6 0.0 9.2 9 0 0 9 9 9 8 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 CCF75211.1 - 1.1e-20 73.7 1.2 2.3e-08 34.4 0.0 6.0 3 1 2 5 5 5 4 HEAT-like repeat HEAT_2 PF13646.6 CCF75211.1 - 4.6e-15 55.8 0.3 5.4e-07 29.9 0.1 5.2 1 1 6 7 7 7 6 HEAT repeats IBB PF01749.20 CCF75211.1 - 2.2e-13 50.4 2.3 3e-12 46.8 1.2 3.0 3 0 0 3 3 3 1 Importin beta binding domain HEAT PF02985.22 CCF75211.1 - 2.4e-09 36.6 2.2 0.025 14.8 0.0 6.8 7 0 0 7 7 7 1 HEAT repeat Arm_3 PF16186.5 CCF75211.1 - 1.7e-07 30.7 0.1 1.7e-06 27.5 0.0 2.5 3 0 0 3 3 3 1 Atypical Arm repeat V-ATPase_H_C PF11698.8 CCF75211.1 - 2.8e-05 24.2 0.0 2.9 8.0 0.0 4.4 3 1 0 4 4 4 1 V-ATPase subunit H Arm_2 PF04826.13 CCF75211.1 - 8.7e-05 22.1 0.0 1 8.8 0.0 3.7 2 2 2 4 4 4 2 Armadillo-like RICTOR_V PF14668.6 CCF75211.1 - 0.00067 19.9 6.7 6.2 7.1 0.2 5.6 5 1 1 6 6 6 1 Rapamycin-insensitive companion of mTOR, domain 5 Adaptin_N PF01602.20 CCF75211.1 - 0.0033 16.0 0.0 0.74 8.3 0.0 2.3 2 0 0 2 2 2 2 Adaptin N terminal region UNC45-central PF11701.8 CCF75211.1 - 0.023 14.6 0.0 13 5.8 0.0 3.6 1 1 3 4 4 4 0 Myosin-binding striated muscle assembly central Atx10homo_assoc PF09759.9 CCF75211.1 - 0.026 14.6 0.4 2.8 8.0 0.0 3.5 2 2 2 5 5 5 0 Spinocerebellar ataxia type 10 protein domain HEAT_PBS PF03130.16 CCF75211.1 - 0.04 14.6 0.3 8.6 7.4 0.1 4.6 5 1 0 5 5 4 0 PBS lyase HEAT-like repeat PEHE PF15275.6 CCF75211.1 - 0.055 14.1 0.4 0.11 13.1 0.4 1.4 1 0 0 1 1 1 0 PEHE domain IFN-gamma PF00714.17 CCF75211.1 - 0.3 10.9 1.2 2.4 8.0 0.5 2.6 3 0 0 3 3 3 0 Interferon gamma RNase_PH PF01138.21 CCF75212.1 - 8.1e-19 68.4 0.0 1.3e-18 67.8 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 CCF75212.1 - 6.9e-11 42.0 0.2 1.2e-10 41.2 0.2 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 SurA_N_2 PF13623.6 CCF75212.1 - 0.024 14.5 0.2 0.11 12.3 0.1 2.2 3 0 0 3 3 3 0 SurA N-terminal domain Aldo_ket_red PF00248.21 CCF75213.1 - 8.5e-52 176.2 0.0 1.3e-51 175.6 0.0 1.2 1 0 0 1 1 1 1 Aldo/keto reductase family Spc7 PF08317.11 CCF75214.1 - 0.00065 18.7 19.0 0.00065 18.7 19.0 7.8 2 1 5 8 8 8 3 Spc7 kinetochore protein DUF5082 PF16888.5 CCF75214.1 - 0.0013 19.0 13.0 0.0013 19.0 13.0 10.3 4 2 6 10 10 10 1 Domain of unknown function (DUF5082) GAS PF13851.6 CCF75214.1 - 0.0026 17.2 38.1 0.0026 17.2 38.1 8.9 2 2 6 9 9 9 3 Growth-arrest specific micro-tubule binding Bacillus_HBL PF05791.11 CCF75214.1 - 0.0061 16.4 9.0 0.0061 16.4 9.0 7.7 2 1 4 8 8 8 2 Bacillus haemolytic enterotoxin (HBL) MscS_porin PF12795.7 CCF75214.1 - 0.0074 15.9 14.2 0.0074 15.9 14.2 7.3 2 1 5 7 7 7 3 Mechanosensitive ion channel porin domain DUF1778 PF08681.11 CCF75214.1 - 0.16 12.0 4.2 0.27 11.2 0.2 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1778) FUSC PF04632.12 CCF75214.1 - 0.61 8.5 17.2 0.44 9.0 0.8 3.7 1 1 1 3 3 3 0 Fusaric acid resistance protein family DUF5631 PF18645.1 CCF75214.1 - 3.1 8.3 11.0 1.6e+02 2.8 0.1 5.7 2 1 3 5 5 5 0 Family of unknown function (DUF5631) PCI PF01399.27 CCF75215.1 - 0.56 10.7 5.0 7.6 7.1 5.0 2.8 1 1 0 1 1 1 0 PCI domain HA2 PF04408.23 CCF75217.1 - 3.3e-19 69.1 0.1 1.7e-18 66.9 0.0 2.2 2 0 0 2 2 2 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 CCF75217.1 - 1e-16 61.1 0.0 3.5e-16 59.3 0.0 2.0 2 0 0 2 2 2 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 CCF75217.1 - 1.9e-12 47.5 0.0 5.2e-12 46.1 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF75217.1 - 1.6e-07 31.2 0.1 3.6e-07 30.1 0.1 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 CCF75217.1 - 0.00039 20.7 0.2 0.0012 19.1 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_14 PF13173.6 CCF75217.1 - 0.0065 16.5 0.7 0.1 12.6 0.1 3.0 2 1 0 2 2 2 1 AAA domain AAA_19 PF13245.6 CCF75217.1 - 0.0069 16.7 0.0 0.017 15.4 0.0 1.6 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 CCF75217.1 - 0.0073 16.3 0.9 1.8 8.5 0.0 2.8 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit DUF2075 PF09848.9 CCF75217.1 - 0.0089 15.3 0.0 0.019 14.2 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 CCF75217.1 - 0.01 14.9 0.0 0.021 13.9 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_30 PF13604.6 CCF75217.1 - 0.014 15.2 0.0 0.023 14.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain DAP3 PF10236.9 CCF75217.1 - 0.025 13.7 0.5 0.35 10.0 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 ATPase PF06745.13 CCF75217.1 - 0.049 13.0 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 KaiC SRP54 PF00448.22 CCF75217.1 - 0.1 12.2 0.3 0.28 10.8 0.0 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Flavi_DEAD PF07652.14 CCF75217.1 - 0.11 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Flavivirus DEAD domain FtsK_SpoIIIE PF01580.18 CCF75217.1 - 0.12 11.7 0.1 0.33 10.2 0.0 1.7 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_16 PF13191.6 CCF75217.1 - 0.19 12.1 0.1 0.65 10.4 0.0 1.9 1 1 1 2 2 2 0 AAA ATPase domain Microtub_bd PF16796.5 CCF75217.1 - 0.45 10.5 2.5 9.7 6.1 0.0 3.3 3 0 0 3 3 3 0 Microtubule binding ERCC4 PF02732.15 CCF75218.1 - 1.7e-13 51.1 0.0 6e-13 49.3 0.0 2.0 1 0 0 1 1 1 1 ERCC4 domain RNA_pol_Rpb8 PF03870.15 CCF75221.1 - 0.016 15.4 0.2 0.036 14.3 0.2 1.6 1 0 0 1 1 1 0 RNA polymerase Rpb8 DUF4400 PF14348.6 CCF75221.1 - 0.13 11.7 0.0 0.13 11.7 0.0 1.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4400) RRM_1 PF00076.22 CCF75222.1 - 2.8e-34 116.7 0.3 8.7e-16 57.5 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF75222.1 - 7.9e-09 35.5 0.2 0.00027 21.0 0.0 2.7 2 2 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 CCF75222.1 - 0.012 15.6 0.2 6.4 6.9 0.0 2.5 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif VGCC_beta4Aa_N PF12052.8 CCF75223.1 - 1.5 9.0 5.4 3.4 7.8 5.4 1.6 1 0 0 1 1 1 0 Voltage gated calcium channel subunit beta domain 4Aa N terminal PET117 PF15786.5 CCF75224.1 - 0.0027 17.9 0.1 0.007 16.6 0.0 1.9 2 0 0 2 2 2 1 PET assembly of cytochrome c oxidase, mitochondrial TrkH PF02386.16 CCF75224.1 - 0.097 11.1 0.1 0.12 10.7 0.1 1.1 1 0 0 1 1 1 0 Cation transport protein Abhydrolase_1 PF00561.20 CCF75225.1 - 0.0007 19.3 0.1 0.0012 18.6 0.1 1.2 1 0 0 1 1 1 1 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 CCF75225.1 - 0.00072 18.9 0.1 0.0013 18.0 0.1 1.3 1 0 0 1 1 1 1 Serine aminopeptidase, S33 KIP1 PF07765.12 CCF75225.1 - 0.061 13.4 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 KIP1-like protein MTHFR_C PF12225.8 CCF75225.1 - 0.13 11.9 0.1 0.31 10.7 0.1 1.6 1 0 0 1 1 1 0 Methylene-tetrahydrofolate reductase C terminal Brix PF04427.18 CCF75226.1 - 2.8e-21 76.5 1.0 6e-21 75.4 1.0 1.5 1 1 0 1 1 1 1 Brix domain ubiquitin PF00240.23 CCF75228.1 - 6.5e-17 61.0 0.3 1.3e-16 60.1 0.3 1.5 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 CCF75228.1 - 3.7e-06 26.7 0.2 7e-06 25.8 0.2 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 CCF75228.1 - 2.9e-05 24.4 0.2 8.8e-05 22.9 0.2 1.8 1 0 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 CCF75228.1 - 0.016 15.7 0.0 0.055 14.0 0.0 1.8 1 0 0 1 1 1 0 DUF2407 ubiquitin-like domain Rad60-SLD_2 PF13881.6 CCF75228.1 - 0.022 14.8 1.1 0.043 13.9 0.2 2.0 2 1 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 CCF75228.1 - 0.035 14.1 0.2 6.3 6.9 0.1 2.5 1 1 1 2 2 2 0 Ubiquitin-like domain TBK1_ULD PF18396.1 CCF75228.1 - 0.1 12.5 0.1 0.26 11.2 0.1 1.6 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain DJ-1_PfpI PF01965.24 CCF75229.1 - 5.3e-34 117.4 0.2 6.9e-34 117.0 0.2 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family Tim17 PF02466.19 CCF75231.1 - 3.5e-18 66.0 0.9 4.3e-18 65.7 0.9 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Methyltransf_11 PF08241.12 CCF75232.1 - 2.7e-17 63.2 0.0 4.2e-17 62.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF75232.1 - 2e-14 54.1 0.0 3.3e-14 53.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF75232.1 - 9.5e-13 48.3 0.0 1.2e-12 48.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF75232.1 - 4.9e-10 39.4 0.0 8.2e-10 38.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 CCF75232.1 - 4e-09 36.2 0.0 6.1e-09 35.6 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 CCF75232.1 - 7.2e-07 29.9 0.0 1.2e-06 29.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 CCF75232.1 - 1.1e-05 25.3 0.0 3.9e-05 23.5 0.0 1.7 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) MetW PF07021.12 CCF75232.1 - 0.0011 18.6 0.0 0.002 17.7 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW MTS PF05175.14 CCF75232.1 - 0.0079 15.8 0.0 0.012 15.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_15 PF09445.10 CCF75232.1 - 0.014 15.0 0.1 0.028 14.0 0.0 1.7 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Methyltransf_16 PF10294.9 CCF75232.1 - 0.028 14.2 0.0 0.037 13.7 0.0 1.2 1 0 0 1 1 1 0 Lysine methyltransferase Methyltransf_8 PF05148.15 CCF75232.1 - 0.037 13.9 0.0 0.061 13.2 0.0 1.4 1 1 0 1 1 1 0 Hypothetical methyltransferase UPF0020 PF01170.18 CCF75232.1 - 0.04 13.6 0.0 0.081 12.6 0.0 1.5 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 CSN8_PSD8_EIF3K PF10075.9 CCF75232.1 - 0.082 12.9 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 CSN8/PSMD8/EIF3K family tRNA-synt_2 PF00152.20 CCF75233.1 - 3.3e-69 233.4 0.1 4.9e-69 232.8 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CCF75233.1 - 1e-13 51.0 0.1 2.1e-13 50.1 0.1 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CCF75233.1 - 4.4e-09 36.2 0.1 0.0002 20.9 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) RNA_pol_Rpb1_2 PF00623.20 CCF75233.1 - 0.038 14.2 0.0 0.066 13.4 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 2 PA14 PF07691.12 CCF75234.1 - 2.5e-16 59.8 0.1 6.4e-16 58.5 0.0 1.8 2 0 0 2 2 2 1 PA14 domain cwf18 PF08315.12 CCF75234.1 - 2.9e-15 57.1 0.0 6.8e-15 55.9 0.0 1.6 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor fn2 PF00040.19 CCF75234.1 - 0.0086 16.3 0.9 0.025 14.9 0.9 1.9 1 0 0 1 1 1 1 Fibronectin type II domain F5_F8_type_C PF00754.25 CCF75234.1 - 0.055 13.6 0.6 0.2 11.8 0.1 2.2 3 0 0 3 3 3 0 F5/8 type C domain Speriolin_C PF15059.6 CCF75235.1 - 0.028 14.6 0.1 0.077 13.1 0.1 1.7 1 0 0 1 1 1 0 Speriolin C-terminus DUF4602 PF15375.6 CCF75236.1 - 1.3e-07 32.0 13.3 1.4e-07 31.9 12.5 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4602) FixO PF02433.15 CCF75236.1 - 0.018 14.5 0.1 0.027 13.9 0.1 1.3 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO Zds_C PF08632.10 CCF75237.1 - 3.4 7.5 5.5 2e+02 1.9 0.0 4.9 5 0 0 5 5 5 0 Activator of mitotic machinery Cdc14 phosphatase activation C-term NUC173 PF08161.12 CCF75239.1 - 2.8e-07 30.4 1.7 2e-06 27.7 0.0 2.9 3 0 0 3 3 3 1 NUC173 domain DUF2443 PF10398.9 CCF75239.1 - 0.06 13.4 0.1 0.48 10.5 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2443) SPG48 PF14764.6 CCF75239.1 - 0.83 10.1 9.1 0.29 11.6 0.4 4.0 3 2 1 4 4 4 0 AP-5 complex subunit, vesicle trafficking Condensin2nSMC PF12422.8 CCF75239.1 - 0.87 9.8 4.9 1.2 9.3 0.1 2.9 3 0 0 3 3 3 0 Condensin II non structural maintenance of chromosomes subunit CTD_bind PF04818.13 CCF75241.1 - 0.002 18.9 0.2 0.0057 17.5 0.2 1.8 1 1 0 1 1 1 1 RNA polymerase II-binding domain. DUF4042 PF13251.6 CCF75242.1 - 0.12 12.1 2.4 3.4 7.3 0.6 3.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4042) PX PF00787.24 CCF75243.1 - 4.2e-09 36.4 0.0 2e-08 34.2 0.0 2.2 1 0 0 1 1 1 1 PX domain Spc7 PF08317.11 CCF75243.1 - 0.00077 18.4 17.4 0.014 14.3 15.3 2.7 2 1 1 3 3 3 2 Spc7 kinetochore protein HrpE PF06188.12 CCF75243.1 - 0.0059 16.5 0.4 0.012 15.5 0.4 1.4 1 0 0 1 1 1 1 HrpE/YscL/FliH and V-type ATPase subunit E ATG16 PF08614.11 CCF75243.1 - 0.2 11.8 11.6 0.39 10.9 11.6 1.4 1 0 0 1 1 1 0 Autophagy protein 16 (ATG16) AI-2E_transport PF01594.16 CCF75243.1 - 0.22 10.6 0.7 12 4.9 0.1 2.5 2 1 1 3 3 3 0 AI-2E family transporter Filament PF00038.21 CCF75243.1 - 1.4 8.4 17.9 0.37 10.3 11.7 2.2 1 1 1 2 2 2 0 Intermediate filament protein Fez1 PF06818.15 CCF75243.1 - 1.4 9.3 12.7 2.7 8.4 12.7 1.5 1 0 0 1 1 1 0 Fez1 Exonuc_VII_L PF02601.15 CCF75243.1 - 2.1 7.9 8.6 4.3 6.8 8.6 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit DHR10 PF18595.1 CCF75243.1 - 8.4 6.5 21.5 3.3 7.8 8.2 2.8 2 1 1 3 3 3 0 Designed helical repeat protein 10 domain Ham1p_like PF01725.16 CCF75244.1 - 3.7e-45 154.2 0.0 4.1e-45 154.0 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Pyr_redox_2 PF07992.14 CCF75247.1 - 1.1e-43 149.6 0.0 1.4e-43 149.2 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CCF75247.1 - 4.1e-15 56.1 0.1 2.6e-11 43.9 0.1 3.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 CCF75247.1 - 2.6e-12 46.5 0.1 5.6e-12 45.4 0.1 1.6 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Reductase_C PF14759.6 CCF75247.1 - 1.4e-07 31.9 0.1 7.3e-07 29.7 0.0 2.3 2 0 0 2 2 1 1 Reductase C-terminal NAD_binding_7 PF13241.6 CCF75247.1 - 3.8e-07 30.5 0.0 0.0079 16.6 0.0 2.4 2 0 0 2 2 2 2 Putative NAD(P)-binding Pyr_redox_3 PF13738.6 CCF75247.1 - 1.8e-06 27.4 0.3 0.05 12.8 0.1 2.5 1 1 2 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Rieske_2 PF13806.6 CCF75247.1 - 1e-05 25.4 0.0 4.2e-05 23.4 0.0 2.0 2 0 0 2 2 2 1 Rieske-like [2Fe-2S] domain TrkA_N PF02254.18 CCF75247.1 - 0.0062 16.8 0.3 0.29 11.4 0.0 2.9 3 0 0 3 3 3 1 TrkA-N domain ThiF PF00899.21 CCF75247.1 - 0.0065 15.9 0.0 0.037 13.4 0.0 2.0 2 0 0 2 2 2 1 ThiF family IlvN PF07991.12 CCF75247.1 - 0.024 14.2 0.2 1.4 8.4 0.0 2.6 3 0 0 3 3 3 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_8 PF13450.6 CCF75247.1 - 0.038 14.2 1.7 0.55 10.5 0.3 2.6 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain DUF1188 PF06690.11 CCF75247.1 - 0.04 13.5 0.1 0.065 12.8 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) ApbA PF02558.16 CCF75247.1 - 0.089 12.4 0.0 0.33 10.6 0.0 2.1 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 CCF75247.1 - 0.09 12.8 0.0 14 5.7 0.0 3.1 3 0 0 3 3 3 0 FAD-NAD(P)-binding Shikimate_DH PF01488.20 CCF75247.1 - 0.15 12.1 0.3 3.5 7.7 0.1 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DUF3228 PF11539.8 CCF75248.1 - 1e-73 247.0 0.1 1.4e-73 246.6 0.1 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) LYTB PF02401.18 CCF75249.1 - 2.2e-77 259.9 2.6 2.6e-77 259.7 2.6 1.1 1 0 0 1 1 1 1 LytB protein UCH PF00443.29 CCF75250.1 - 3.2e-27 95.6 2.0 5.1e-27 95.0 0.2 2.3 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 CCF75250.1 - 9.9e-09 35.2 8.4 1.5e-07 31.4 2.5 3.5 2 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase GDA1_CD39 PF01150.17 CCF75251.1 - 2.1e-33 115.6 0.0 1.6e-32 112.7 0.0 2.3 1 1 0 1 1 1 1 GDA1/CD39 (nucleoside phosphatase) family DUF5644 PF18712.1 CCF75251.1 - 0.0015 18.6 2.3 0.0089 16.0 0.5 3.1 2 1 0 2 2 2 1 Family of unknown function (DUF5644) TAXi_N PF14543.6 CCF75252.1 - 6e-26 91.8 0.8 1e-25 91.0 0.8 1.4 1 0 0 1 1 1 1 Xylanase inhibitor N-terminal Asp PF00026.23 CCF75252.1 - 1.1e-17 64.5 3.8 2.9e-17 63.1 3.8 1.8 1 1 0 1 1 1 1 Eukaryotic aspartyl protease YfcL PF08891.11 CCF75252.1 - 0.084 13.2 0.1 26 5.3 0.1 2.5 2 0 0 2 2 2 0 YfcL protein TAXi_C PF14541.6 CCF75252.1 - 0.099 12.4 0.1 4 7.2 0.1 2.3 2 0 0 2 2 2 0 Xylanase inhibitor C-terminal RCC1 PF00415.18 CCF75253.1 - 2e-46 156.4 3.1 2.2e-10 41.0 0.0 7.9 7 1 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 CCF75253.1 - 1.1e-33 114.4 19.6 7.5e-08 32.0 0.1 7.4 7 0 0 7 7 7 7 Regulator of chromosome condensation (RCC1) repeat zf-RanBP PF00641.18 CCF75253.1 - 7.2 6.0 14.9 21 4.5 14.9 1.9 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others ETRAMP PF09716.10 CCF75254.1 - 0.0016 18.5 0.0 0.0021 18.1 0.0 1.1 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Got1 PF04178.12 CCF75255.1 - 2.3e-18 66.7 10.7 2.6e-18 66.5 10.7 1.0 1 0 0 1 1 1 1 Got1/Sft2-like family Got1 PF04178.12 CCF75256.1 - 2e-19 70.1 17.1 2e-19 70.1 17.1 1.3 1 1 0 1 1 1 1 Got1/Sft2-like family DUF2070 PF09843.9 CCF75256.1 - 3.5 5.8 16.7 4.5 5.5 16.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TAF PF02969.17 CCF75258.1 - 1e-08 35.2 0.1 2.5e-08 33.9 0.1 1.7 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) TAF6_C PF07571.13 CCF75258.1 - 8e-05 22.9 0.2 0.00049 20.4 0.1 2.4 3 0 0 3 3 3 1 TAF6 C-terminal HEAT repeat domain Topoisom_bac PF01131.20 CCF75259.1 - 5.2e-106 355.1 0.0 6.4e-106 354.8 0.0 1.1 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 CCF75259.1 - 9.9e-15 54.6 0.0 2.1e-14 53.6 0.0 1.6 1 0 0 1 1 1 1 Toprim domain DUF2226 PF09987.9 CCF75259.1 - 0.19 11.1 0.0 0.33 10.3 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2226) RRM_1 PF00076.22 CCF75260.1 - 8.3e-44 147.3 0.1 1.5e-17 63.2 0.0 3.6 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF75260.1 - 1.6e-06 27.9 0.0 0.0057 16.5 0.0 2.8 2 0 0 2 2 2 2 Occluded RNA-recognition motif DUF1866 PF08952.11 CCF75260.1 - 0.013 15.3 0.0 0.45 10.4 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF1866) RBM39linker PF15519.6 CCF75260.1 - 0.033 15.3 0.2 0.18 12.9 0.0 2.3 2 0 0 2 2 2 0 linker between RRM2 and RRM3 domains in RBM39 protein PNISR PF15996.5 CCF75260.1 - 0.68 10.2 10.6 0.086 13.1 6.1 1.7 2 0 0 2 2 2 0 Arginine/serine-rich protein PNISR SR-25 PF10500.9 CCF75260.1 - 2.4 7.7 32.8 5.5 6.5 32.8 1.5 1 0 0 1 1 1 0 Nuclear RNA-splicing-associated protein SOBP PF15279.6 CCF75260.1 - 2.8 8.5 9.2 4.7 7.7 9.2 1.4 1 0 0 1 1 1 0 Sine oculis-binding protein Hid1 PF12722.7 CCF75260.1 - 5 5.1 8.1 7 4.6 8.1 1.2 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein FAM76 PF16046.5 CCF75260.1 - 7.5 5.8 19.2 14 4.9 19.2 1.4 1 0 0 1 1 1 0 FAM76 protein DUF3273 PF11677.8 CCF75261.1 - 6.7e-94 314.1 7.5 7.6e-94 313.9 7.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3273) AATF-Che1 PF13339.6 CCF75262.1 - 0.03 15.0 6.2 5 7.8 0.1 3.6 3 1 0 3 3 3 0 Apoptosis antagonizing transcription factor MRP-S23 PF10484.9 CCF75262.1 - 0.1 12.9 3.0 0.32 11.3 0.7 3.0 2 1 1 3 3 3 0 Mitochondrial ribosomal protein S23 Med10 PF09748.9 CCF75262.1 - 0.28 11.2 6.8 1.7 8.7 0.2 3.0 3 0 0 3 3 3 0 Transcription factor subunit Med10 of Mediator complex hnRNP_Q_AcD PF18360.1 CCF75262.1 - 0.88 9.6 5.7 1.2 9.1 0.4 3.4 4 0 0 4 4 4 0 Heterogeneous nuclear ribonucleoprotein Q acidic domain YgaB PF14182.6 CCF75262.1 - 7.1 7.1 6.5 6.6 7.2 0.3 3.7 4 0 0 4 4 4 0 YgaB-like protein V-ATPase_G PF03179.15 CCF75263.1 - 2e-16 60.4 13.0 7.6e-11 42.5 5.7 2.0 2 0 0 2 2 2 2 Vacuolar (H+)-ATPase G subunit AAA_32 PF13654.6 CCF75263.1 - 0.023 13.5 6.8 0.027 13.3 6.8 1.1 1 0 0 1 1 1 0 AAA domain Repressor_Mnt PF11423.8 CCF75263.1 - 0.11 12.3 0.9 0.29 11.0 0.9 1.8 1 1 0 1 1 1 0 Regulatory protein Mnt NifU_N PF01592.16 CCF75263.1 - 0.11 12.6 0.5 0.17 12.0 0.5 1.3 1 0 0 1 1 1 0 NifU-like N terminal domain ATP-synt_B PF00430.18 CCF75263.1 - 0.2 11.7 10.4 0.36 10.9 0.3 2.4 2 1 0 2 2 2 0 ATP synthase B/B' CF(0) V-ATPase_G_2 PF16999.5 CCF75263.1 - 0.84 10.1 9.0 2.6 8.5 0.1 2.4 2 1 0 2 2 2 0 Vacuolar (H+)-ATPase G subunit Cor1 PF04803.12 CCF75263.1 - 0.92 9.7 12.1 6.6 6.9 12.2 2.1 1 1 0 1 1 1 0 Cor1/Xlr/Xmr conserved region RNA_pol_Rpb5_C PF01191.19 CCF75263.1 - 2.6 8.0 5.3 1.1 9.2 1.2 2.1 2 0 0 2 2 2 0 RNA polymerase Rpb5, C-terminal domain Acetyltransf_1 PF00583.25 CCF75264.1 - 7.2e-12 45.6 0.0 1.1e-11 45.0 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 CCF75264.1 - 2.8e-06 27.7 0.0 4.7e-06 26.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CCF75264.1 - 3.7e-06 26.9 0.0 5.8e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CCF75264.1 - 0.00046 20.1 0.0 0.00083 19.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 CCF75264.1 - 0.00083 20.0 0.0 0.0011 19.7 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CCF75264.1 - 0.0076 16.4 0.1 0.013 15.7 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Ribosomal_L23 PF00276.20 CCF75265.1 - 4.2e-14 52.7 0.1 4.2e-14 52.7 0.1 3.1 2 2 0 2 2 2 1 Ribosomal protein L23 Ribosomal_L23eN PF03939.13 CCF75265.1 - 4.7e-06 26.7 13.9 6.8e-06 26.2 12.6 1.9 1 1 0 1 1 1 1 Ribosomal protein L23, N-terminal domain ATP-synt_G PF04718.15 CCF75265.1 - 0.22 12.4 0.9 0.41 11.5 0.6 1.6 1 1 0 1 1 1 0 Mitochondrial ATP synthase g subunit DUF4629 PF15442.6 CCF75265.1 - 1.3 9.2 15.5 1.2 9.3 14.4 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4629) Paf1 PF03985.13 CCF75266.1 - 0.021 13.8 0.5 0.021 13.8 0.5 2.4 2 1 1 3 3 3 0 Paf1 Chorein_N PF12624.7 CCF75267.1 - 3.4e-22 78.7 0.3 1.6e-21 76.5 0.1 2.3 2 0 0 2 2 2 1 N-terminal region of Chorein or VPS13 VPS13 PF16908.5 CCF75267.1 - 1.3e-14 54.5 0.0 4.3e-14 52.9 0.0 1.9 1 0 0 1 1 1 1 Vacuolar sorting-associated protein 13, N-terminal ATG_C PF09333.11 CCF75267.1 - 2.8e-06 27.6 0.1 6.7e-06 26.4 0.1 1.5 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain VPS13_C PF16909.5 CCF75267.1 - 0.014 15.2 2.6 1.3 8.8 0.0 3.9 4 0 0 4 4 4 0 Vacuolar-sorting-associated 13 protein C-terminal DEAD PF00270.29 CCF75268.1 - 6.6e-14 52.1 0.0 1.3e-13 51.1 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 CCF75268.1 - 2.2e-06 27.8 0.0 8.3e-06 25.9 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 CCF75268.1 - 9.6e-05 22.7 0.0 0.00033 21.0 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain Ras PF00071.22 CCF75270.1 - 1.5e-52 177.5 0.2 1.7e-52 177.3 0.2 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF75270.1 - 2.8e-33 114.7 0.1 4.1e-33 114.1 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF75270.1 - 6.2e-12 45.3 0.1 8e-12 45.0 0.1 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 CCF75270.1 - 5.2e-07 29.7 0.1 9.8e-07 28.9 0.0 1.5 2 0 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 CCF75270.1 - 1.5e-05 24.5 0.0 2.3e-05 23.9 0.0 1.3 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 CCF75270.1 - 0.00024 20.7 0.0 0.003 17.1 0.0 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 CCF75270.1 - 0.00053 19.9 0.0 0.001 19.0 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase SRPRB PF09439.10 CCF75270.1 - 0.0055 16.2 0.0 0.0077 15.7 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_22 PF13401.6 CCF75270.1 - 0.0062 16.8 0.0 0.012 15.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CCF75270.1 - 0.012 16.0 0.0 0.016 15.6 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 CCF75270.1 - 0.013 15.4 0.2 0.024 14.6 0.2 1.7 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_23 PF13476.6 CCF75270.1 - 0.018 15.6 0.0 1.9 8.9 0.1 2.1 1 1 1 2 2 2 0 AAA domain AAA_7 PF12775.7 CCF75270.1 - 0.019 14.5 0.1 0.032 13.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 CCF75270.1 - 0.027 14.2 0.0 0.048 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain PduV-EutP PF10662.9 CCF75270.1 - 0.031 14.0 0.1 0.56 10.0 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Septin PF00735.18 CCF75270.1 - 0.046 13.0 0.1 0.076 12.3 0.1 1.3 1 0 0 1 1 1 0 Septin AAA_29 PF13555.6 CCF75270.1 - 0.063 13.0 0.2 0.39 10.5 0.0 2.2 2 0 0 2 2 2 0 P-loop containing region of AAA domain cobW PF02492.19 CCF75270.1 - 0.072 12.7 0.0 0.096 12.3 0.0 1.3 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain TniB PF05621.11 CCF75270.1 - 0.077 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein MraZ PF02381.18 CCF75270.1 - 0.15 12.1 0.4 15 5.7 0.0 2.6 2 1 1 3 3 3 0 MraZ protein, putative antitoxin-like ABC_tran PF00005.27 CCF75270.1 - 0.24 11.9 1.4 0.45 11.0 1.4 1.8 1 1 0 1 1 1 0 ABC transporter Rer1 PF03248.13 CCF75271.1 - 8.4e-55 185.1 8.1 1.3e-54 184.5 8.1 1.2 1 0 0 1 1 1 1 Rer1 family SLC3A2_N PF16028.5 CCF75271.1 - 3.9 7.1 5.1 0.51 9.9 0.6 1.9 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus OGG_N PF07934.12 CCF75272.1 - 0.039 14.1 0.1 0.22 11.6 0.1 2.2 2 0 0 2 2 2 0 8-oxoguanine DNA glycosylase, N-terminal domain Bromo_MP PF01573.16 CCF75272.1 - 0.085 12.2 0.1 0.44 9.8 0.2 1.9 2 0 0 2 2 2 0 Bromovirus movement protein DOT1 PF08123.13 CCF75273.1 - 6.4e-06 25.8 0.0 1.5e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Histone methylation protein DOT1 Amdo_NSP PF12475.8 CCF75273.1 - 0.055 13.5 2.3 0.59 10.3 0.1 2.9 2 0 0 2 2 2 0 Amdovirus non-structural protein PCMT PF01135.19 CCF75273.1 - 0.18 11.6 0.0 0.31 10.8 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cullin PF00888.22 CCF75274.1 - 3.6e-22 78.8 18.5 5.4e-22 78.2 18.5 1.2 1 0 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 CCF75274.1 - 0.052 13.6 3.4 0.074 13.1 0.1 3.1 4 0 0 4 4 4 0 Cullin protein neddylation domain CAP PF00188.26 CCF75275.1 - 0.042 14.7 0.0 0.049 14.5 0.0 1.2 1 0 0 1 1 1 0 Cysteine-rich secretory protein family Steroid_dh PF02544.16 CCF75277.1 - 3.7e-35 121.1 8.6 6.1e-35 120.4 8.6 1.3 1 0 0 1 1 1 1 3-oxo-5-alpha-steroid 4-dehydrogenase AAA_12 PF13087.6 CCF75278.1 - 3.2e-55 186.8 0.0 7.3e-55 185.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 CCF75278.1 - 2.3e-32 112.8 1.9 1.2e-19 71.1 1.2 2.4 1 1 1 2 2 2 2 AAA domain AAA_30 PF13604.6 CCF75278.1 - 3.8e-07 30.0 0.0 1.1e-06 28.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 CCF75278.1 - 3.6e-06 27.4 0.0 1.1e-05 25.8 0.0 1.9 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 CCF75278.1 - 0.0001 22.1 0.0 0.00032 20.5 0.0 1.8 1 0 0 1 1 1 1 IstB-like ATP binding protein PIF1 PF05970.14 CCF75278.1 - 0.0027 16.9 0.0 0.011 14.9 0.0 1.8 2 0 0 2 2 2 1 PIF1-like helicase NACHT PF05729.12 CCF75278.1 - 0.0065 16.4 0.0 0.018 15.0 0.0 1.7 1 0 0 1 1 1 1 NACHT domain ResIII PF04851.15 CCF75278.1 - 0.011 15.8 0.0 0.025 14.6 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit PhoH PF02562.16 CCF75278.1 - 0.027 13.9 0.0 0.06 12.8 0.0 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_7 PF12775.7 CCF75278.1 - 0.071 12.6 0.0 0.19 11.2 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 CCF75278.1 - 0.14 12.6 0.0 0.34 11.3 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) dsrm PF00035.26 CCF75278.1 - 0.14 12.9 0.1 2.9 8.7 0.0 3.0 3 0 0 3 3 2 0 Double-stranded RNA binding motif AAA_25 PF13481.6 CCF75278.1 - 0.16 11.6 0.0 0.35 10.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 CCF75278.1 - 0.18 11.0 0.5 16 4.6 0.1 2.6 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) SH2_2 PF14633.6 CCF75279.1 - 1.4e-18 67.1 0.0 3.2e-18 65.9 0.0 1.6 1 0 0 1 1 1 1 SH2 domain HHH_7 PF14635.6 CCF75279.1 - 1.7e-12 47.6 0.0 5.7e-12 45.9 0.0 1.9 1 0 0 1 1 1 1 Helix-hairpin-helix motif HTH_44 PF14641.6 CCF75279.1 - 0.00027 21.4 0.5 0.0008 19.8 0.5 1.8 1 0 0 1 1 1 1 Helix-turn-helix DNA-binding domain of SPT6 HHH_3 PF12836.7 CCF75279.1 - 0.13 12.5 0.0 0.73 10.1 0.0 2.3 2 1 0 2 2 2 0 Helix-hairpin-helix motif RRM_1 PF00076.22 CCF75280.1 - 1.8e-17 62.9 0.1 2.4e-17 62.5 0.1 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 CCF75280.1 - 0.00024 21.1 0.1 0.00037 20.5 0.1 1.3 1 0 0 1 1 1 1 RNA binding motif RRM_5 PF13893.6 CCF75280.1 - 0.0066 16.0 0.0 0.0078 15.8 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF75280.1 - 0.024 14.5 0.0 0.048 13.5 0.0 1.5 1 1 0 1 1 1 0 Occluded RNA-recognition motif Limkain-b1 PF11608.8 CCF75280.1 - 0.067 13.3 0.0 0.13 12.4 0.0 1.6 1 1 0 1 1 1 0 Limkain b1 KASH_CCD PF14662.6 CCF75281.1 - 7.4e-05 22.7 15.1 7.4e-05 22.7 15.1 2.7 3 0 0 3 3 3 1 Coiled-coil region of CCDC155 or KASH PH PF00169.29 CCF75281.1 - 0.26 11.8 12.2 0.41 11.2 0.1 5.3 6 0 0 6 6 6 0 PH domain Wtap PF17098.5 CCF75282.1 - 0.0026 17.7 0.6 0.0026 17.7 0.6 3.0 2 1 0 2 2 2 1 WTAP/Mum2p family ATG16 PF08614.11 CCF75282.1 - 0.003 17.8 7.3 0.003 17.8 7.3 2.1 2 0 0 2 2 2 1 Autophagy protein 16 (ATG16) GAS PF13851.6 CCF75282.1 - 0.059 12.7 19.0 0.027 13.8 3.1 3.1 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding DHR10 PF18595.1 CCF75282.1 - 0.071 13.2 11.2 0.43 10.7 5.1 2.8 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Cortex-I_coil PF09304.10 CCF75282.1 - 0.082 13.1 8.8 1.9 8.8 1.9 2.9 2 0 0 2 2 2 0 Cortexillin I, coiled coil bZIP_1 PF00170.21 CCF75282.1 - 0.19 11.9 15.4 0.034 14.2 1.7 3.8 3 0 0 3 3 3 0 bZIP transcription factor DUF2570 PF10828.8 CCF75282.1 - 0.29 11.0 7.9 0.081 12.7 0.9 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2570) DivIC PF04977.15 CCF75282.1 - 0.83 9.5 12.9 0.54 10.1 0.3 3.7 1 1 2 3 3 3 0 Septum formation initiator DUF2205 PF10224.9 CCF75282.1 - 0.92 9.6 6.7 2.6 8.1 0.1 2.9 2 0 0 2 2 2 0 Short coiled-coil protein ADIP PF11559.8 CCF75282.1 - 1.1 9.4 22.3 0.098 12.7 3.6 3.3 2 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding CENP-F_leu_zip PF10473.9 CCF75282.1 - 2.5 8.1 16.5 1.2 9.1 0.7 3.0 3 0 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 UPF0242 PF06785.11 CCF75282.1 - 2.5 8.2 17.4 3.2 7.8 14.4 2.4 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus Csm1_N PF18504.1 CCF75282.1 - 3 8.3 10.6 6 7.3 0.8 3.0 2 0 0 2 2 2 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 CCF75282.1 - 3 7.9 14.0 1.9 8.6 6.0 2.7 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein GIT_CC PF16559.5 CCF75282.1 - 3.6 7.5 13.7 1.2 9.0 1.0 4.1 3 1 1 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor Flu_NS2 PF00601.19 CCF75282.1 - 8.5 6.8 9.1 0.49 10.7 1.3 3.0 4 0 0 4 4 4 0 Influenza non-structural protein (NS2) Img2 PF05046.14 CCF75284.1 - 3.4e-15 56.1 0.2 4.9e-15 55.6 0.2 1.2 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) MT-A70 PF05063.14 CCF75286.1 - 2.5e-52 177.2 1.0 4.4e-52 176.5 1.0 1.4 1 0 0 1 1 1 1 MT-A70 SIR2 PF02146.17 CCF75286.1 - 0.029 14.3 1.0 0.13 12.2 0.4 2.0 1 1 1 2 2 2 0 Sir2 family CsgA PF17334.2 CCF75286.1 - 0.071 13.9 1.9 0.22 12.3 0.4 2.3 2 0 0 2 2 2 0 Minor curli fiber component A Skp1_POZ PF03931.15 CCF75286.1 - 0.094 12.9 0.0 0.3 11.3 0.0 1.9 1 0 0 1 1 1 0 Skp1 family, tetramerisation domain DUF3128 PF11326.8 CCF75286.1 - 0.64 10.4 3.5 5.3 7.5 0.7 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3128) EF-hand_7 PF13499.6 CCF75287.1 - 1.1e-24 86.6 3.6 4.7e-14 52.6 1.5 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 CCF75287.1 - 5.2e-23 78.8 9.5 8e-07 28.2 0.8 4.2 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 CCF75287.1 - 1e-20 71.8 6.5 4.4e-07 29.3 0.0 4.5 4 0 0 4 4 4 3 EF-hand domain EF-hand_8 PF13833.6 CCF75287.1 - 5.3e-18 64.6 7.6 7e-11 41.8 0.4 3.7 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 CCF75287.1 - 1.2e-10 41.6 0.1 5e-07 29.9 0.0 2.4 2 1 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 CCF75287.1 - 8.8e-09 34.5 9.8 0.00019 20.8 1.0 3.7 3 0 0 3 3 3 3 EF hand EF-hand_14 PF17959.1 CCF75287.1 - 1.2e-05 25.5 0.6 0.059 13.7 0.2 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 CCF75287.1 - 0.0021 18.0 3.5 0.11 12.4 1.0 2.9 1 1 0 2 2 2 1 Cytoskeletal-regulatory complex EF hand Caleosin PF05042.13 CCF75287.1 - 0.016 15.1 0.2 7.6 6.4 0.0 3.0 2 1 1 3 3 3 0 Caleosin related protein SPARC_Ca_bdg PF10591.9 CCF75287.1 - 0.018 15.4 0.5 3.9 7.8 0.1 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region IF2_N PF04760.15 CCF75287.1 - 0.051 13.4 2.3 3.5 7.5 0.1 3.6 4 0 0 4 4 4 0 Translation initiation factor IF-2, N-terminal region EF-hand_11 PF08976.11 CCF75287.1 - 0.061 14.2 0.6 1.4 9.9 0.1 2.2 1 1 1 2 2 2 0 EF-hand domain DNA_pol3_finger PF17657.1 CCF75289.1 - 0.089 12.1 0.0 0.19 11.1 0.0 1.5 1 0 0 1 1 1 0 Bacterial DNA polymerase III alpha subunit finger domain SPC25 PF06703.11 CCF75290.1 - 0.0064 16.3 0.0 0.0082 15.9 0.0 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) Pet191_N PF10203.9 CCF75290.1 - 0.45 10.8 3.7 0.72 10.2 3.7 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase assembly protein PET191 Ribosomal_L28e PF01778.17 CCF75291.1 - 1.2e-16 61.5 4.0 1.4e-16 61.3 4.0 1.0 1 0 0 1 1 1 1 Ribosomal L28e protein family Cyclin_N PF00134.23 CCF75292.1 - 0.027 14.2 1.5 0.11 12.2 0.4 2.5 2 1 0 2 2 2 0 Cyclin, N-terminal domain Ribosomal_L35Ae PF01247.18 CCF75293.1 - 6.3e-39 132.0 1.6 7.4e-39 131.8 1.6 1.0 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 CCF75293.1 - 0.069 13.4 0.0 10 6.4 0.0 2.4 3 0 0 3 3 3 0 RimM N-terminal domain Porin_3 PF01459.22 CCF75294.1 - 0.0039 16.7 7.0 0.0075 15.8 7.0 1.5 1 1 0 1 1 1 1 Eukaryotic porin DUF4365 PF14280.6 CCF75294.1 - 0.098 12.6 0.1 0.23 11.4 0.1 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF4365) cobW PF02492.19 CCF75295.1 - 1.7e-30 105.9 0.2 2.7e-30 105.3 0.2 1.3 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 CCF75295.1 - 0.00066 20.0 0.0 0.0036 17.6 0.0 2.2 3 0 0 3 3 3 1 AAA domain CobW_C PF07683.14 CCF75295.1 - 0.00067 19.5 0.0 0.0023 17.8 0.0 1.9 1 1 0 1 1 1 1 Cobalamin synthesis protein cobW C-terminal domain Viral_helicase1 PF01443.18 CCF75295.1 - 0.0019 18.0 0.0 0.0031 17.3 0.0 1.3 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase ATPase_2 PF01637.18 CCF75295.1 - 0.0056 16.6 0.0 0.016 15.1 0.0 1.8 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_33 PF13671.6 CCF75295.1 - 0.032 14.4 0.0 0.064 13.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 CCF75295.1 - 0.039 14.0 0.0 0.12 12.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 CCF75295.1 - 0.044 14.3 0.0 0.11 13.0 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 CCF75295.1 - 0.051 13.6 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 CCF75295.1 - 0.054 13.9 0.0 0.13 12.7 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain MobB PF03205.14 CCF75295.1 - 0.076 12.9 0.0 0.15 12.0 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B dNK PF01712.19 CCF75295.1 - 0.091 12.6 0.3 0.25 11.2 0.0 1.8 2 1 0 2 2 2 0 Deoxynucleoside kinase NACHT PF05729.12 CCF75295.1 - 0.1 12.5 0.0 0.28 11.1 0.0 1.7 1 0 0 1 1 1 0 NACHT domain T2SSE PF00437.20 CCF75295.1 - 0.13 11.3 0.0 0.21 10.6 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein FAD_SOX PF18371.1 CCF75296.1 - 0.05 14.0 0.1 0.056 13.8 0.1 1.2 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase BOP1NT PF08145.12 CCF75297.1 - 1.6e-55 188.9 5.2 2.4e-55 188.3 5.2 1.2 1 0 0 1 1 1 1 BOP1NT (NUC169) domain ANAPC4_WD40 PF12894.7 CCF75297.1 - 0.0011 19.3 0.0 1.5 9.2 0.0 3.4 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF75297.1 - 0.0059 17.4 1.0 17 6.5 0.0 4.1 4 0 0 4 4 4 1 WD domain, G-beta repeat HAP1_N PF04849.13 CCF75298.1 - 0.00035 19.9 18.6 0.00077 18.8 18.6 1.5 1 0 0 1 1 1 1 HAP1 N-terminal conserved region TSC22 PF01166.18 CCF75298.1 - 0.0042 17.4 11.2 0.23 11.8 0.9 3.3 2 0 0 2 2 2 2 TSC-22/dip/bun family WD40_alt PF14077.6 CCF75298.1 - 0.078 12.9 0.8 0.29 11.0 0.8 2.1 1 0 0 1 1 1 0 Alternative WD40 repeat motif Trimer_CC PF08954.11 CCF75298.1 - 0.078 12.5 0.1 0.28 10.8 0.1 1.9 1 0 0 1 1 1 0 Trimerisation motif ZapB PF06005.12 CCF75298.1 - 0.17 12.3 23.9 0.18 12.3 8.7 3.7 3 0 0 3 3 3 0 Cell division protein ZapB bZIP_2 PF07716.15 CCF75298.1 - 0.53 10.4 11.8 4.8 7.3 0.8 3.1 2 0 0 2 2 2 0 Basic region leucine zipper YabA PF06156.13 CCF75298.1 - 0.99 10.1 24.4 1.4 9.6 8.1 3.6 2 1 0 3 3 3 0 Initiation control protein YabA DivIC PF04977.15 CCF75298.1 - 1.5 8.7 17.3 3.2 7.6 4.4 3.1 1 1 0 2 2 2 0 Septum formation initiator bZIP_1 PF00170.21 CCF75298.1 - 5.3 7.2 19.8 0.2 11.8 3.4 3.8 4 0 0 4 4 4 0 bZIP transcription factor DUF4407 PF14362.6 CCF75298.1 - 5.9 6.1 13.5 11 5.3 13.5 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) YjeJ PF15922.5 CCF75300.1 - 1.3 8.2 4.1 1.2 8.3 2.9 1.3 1 1 0 1 1 1 0 YjeJ-like DUF3420 PF11900.8 CCF75301.1 - 0.059 13.5 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3420) COX15-CtaA PF02628.15 CCF75302.1 - 6.7e-90 301.4 0.0 7.7e-90 301.2 0.0 1.0 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein Peptidase_M24 PF00557.24 CCF75303.1 - 1.1e-35 123.3 0.0 1.4e-35 122.9 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Plant_NMP1 PF06694.11 CCF75303.1 - 0.22 10.6 1.9 0.95 8.5 0.6 2.0 1 1 1 2 2 2 0 Plant nuclear matrix protein 1 (NMP1) DUF4781 PF16013.5 CCF75303.1 - 2.8 6.7 4.1 3.9 6.2 4.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4781) MAM33 PF02330.16 CCF75304.1 - 2.6e-30 106.0 0.5 1.2e-29 103.8 0.5 1.8 1 1 0 1 1 1 1 Mitochondrial glycoprotein MINDY_DUB PF04424.13 CCF75304.1 - 0.055 13.5 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 MINDY deubiquitinase AAA_5 PF07728.14 CCF75305.1 - 5.2e-100 331.0 0.0 5.1e-21 75.1 0.0 9.5 9 0 0 9 9 9 9 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 CCF75305.1 - 3.3e-30 104.6 0.1 2.1e-09 37.3 0.0 7.6 7 0 0 7 7 7 3 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF75305.1 - 7e-23 81.8 0.0 0.0069 16.8 0.0 6.7 6 0 0 6 6 6 5 AAA ATPase domain Dynein_heavy PF03028.15 CCF75305.1 - 3.6e-21 75.5 0.1 0.0036 17.4 0.0 6.2 5 0 0 5 5 5 4 Dynein heavy chain region D6 P-loop domain AAA PF00004.29 CCF75305.1 - 9.6e-21 74.6 0.4 0.0008 19.8 0.0 7.3 7 0 0 7 7 6 3 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF75305.1 - 1.4e-20 73.9 0.1 0.042 14.1 0.0 7.3 6 0 0 6 6 6 5 AAA domain AAA_7 PF12775.7 CCF75305.1 - 5.1e-19 68.5 2.5 0.00041 19.9 0.0 6.8 6 1 0 6 6 6 4 P-loop containing dynein motor region AAA_18 PF13238.6 CCF75305.1 - 9.6e-17 61.8 0.1 0.23 12.0 0.0 7.0 6 0 0 6 6 6 5 AAA domain AAA_lid_7 PF17867.1 CCF75305.1 - 1.2e-16 60.9 0.7 0.00072 19.7 0.0 5.2 4 0 0 4 4 4 4 Midasin AAA lid domain AAA_lid_5 PF17865.1 CCF75305.1 - 1.9e-16 60.0 1.1 9.7e-14 51.3 0.7 3.1 2 0 0 2 2 2 1 Midasin AAA lid domain AAA_14 PF13173.6 CCF75305.1 - 7.2e-16 58.4 0.2 9e-05 22.5 0.0 7.2 7 0 0 7 7 6 3 AAA domain Sigma54_activat PF00158.26 CCF75305.1 - 9.8e-14 51.4 0.2 0.26 11.0 0.0 6.4 6 0 0 6 6 6 3 Sigma-54 interaction domain TsaE PF02367.17 CCF75305.1 - 4.2e-13 49.4 1.6 0.17 11.9 0.1 7.0 7 0 0 7 7 6 3 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 CCF75305.1 - 4.1e-12 46.4 1.0 0.71 9.8 0.0 6.7 6 0 0 6 6 6 2 Rad17 P-loop domain T2SSE PF00437.20 CCF75305.1 - 7.6e-12 44.9 3.2 0.21 10.6 0.0 6.2 6 0 0 6 6 6 4 Type II/IV secretion system protein RNA_helicase PF00910.22 CCF75305.1 - 1.6e-11 44.6 0.0 5 7.6 0.0 7.3 6 0 0 6 6 6 0 RNA helicase ABC_tran PF00005.27 CCF75305.1 - 7.5e-11 42.7 0.9 0.67 10.5 0.1 7.1 6 0 0 6 6 6 1 ABC transporter AAA_2 PF07724.14 CCF75305.1 - 2.6e-10 40.7 2.1 0.46 10.6 0.0 6.9 7 0 0 7 7 6 2 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 CCF75305.1 - 2.6e-10 40.0 1.8 0.2 11.0 0.0 7.6 9 1 0 9 9 7 2 Magnesium chelatase, subunit ChlI AAA_6 PF12774.7 CCF75305.1 - 9.8e-10 37.9 10.8 0.14 11.1 0.0 8.3 9 1 1 10 10 9 3 Hydrolytic ATP binding site of dynein motor region AAA_24 PF13479.6 CCF75305.1 - 1.2e-09 38.2 0.2 3.3 7.4 0.0 6.1 6 0 0 6 6 6 1 AAA domain AAA_30 PF13604.6 CCF75305.1 - 6.5e-08 32.5 0.0 0.14 11.8 0.0 6.2 7 0 0 7 7 7 1 AAA domain Sigma54_activ_2 PF14532.6 CCF75305.1 - 6.7e-08 32.8 0.5 0.018 15.1 0.0 6.2 6 0 0 6 6 5 1 Sigma-54 interaction domain RuvB_N PF05496.12 CCF75305.1 - 7.7e-08 32.2 0.8 0.15 11.8 0.0 6.5 6 0 0 6 6 6 1 Holliday junction DNA helicase RuvB P-loop domain MCM PF00493.23 CCF75305.1 - 9.1e-08 31.5 0.0 0.03 13.4 0.0 5.0 5 0 0 5 5 5 2 MCM P-loop domain AAA_33 PF13671.6 CCF75305.1 - 3e-07 30.7 0.0 17 5.6 0.0 5.6 5 0 0 5 5 5 0 AAA domain VWA_2 PF13519.6 CCF75305.1 - 8.1e-07 29.7 0.0 5e-06 27.1 0.0 2.5 2 0 0 2 2 1 1 von Willebrand factor type A domain RsgA_GTPase PF03193.16 CCF75305.1 - 8.3e-07 29.1 4.1 0.62 9.9 0.0 5.7 6 0 0 6 6 6 1 RsgA GTPase AAA_28 PF13521.6 CCF75305.1 - 9.6e-07 29.2 0.7 0.9 9.8 0.0 5.8 6 0 0 6 6 6 1 AAA domain SRP54 PF00448.22 CCF75305.1 - 2.8e-06 27.1 0.1 3.4 7.2 0.0 5.2 6 0 0 6 6 6 1 SRP54-type protein, GTPase domain AAA_19 PF13245.6 CCF75305.1 - 3.5e-06 27.4 0.2 6.1 7.2 0.0 5.5 6 0 0 6 6 4 0 AAA domain AAA_25 PF13481.6 CCF75305.1 - 4.5e-06 26.4 0.1 0.69 9.5 0.0 4.2 4 0 0 4 4 4 2 AAA domain AAA_29 PF13555.6 CCF75305.1 - 7e-06 25.7 1.9 8.8 6.2 0.0 5.5 6 0 0 6 6 5 0 P-loop containing region of AAA domain VWA PF00092.28 CCF75305.1 - 3e-05 24.4 0.6 0.00018 21.8 0.1 2.7 2 0 0 2 2 1 1 von Willebrand factor type A domain NTPase_1 PF03266.15 CCF75305.1 - 5e-05 23.3 3.9 5.6 6.8 0.0 6.2 7 0 0 7 7 6 0 NTPase PduV-EutP PF10662.9 CCF75305.1 - 9.6e-05 22.2 3.9 0.76 9.5 0.2 5.3 6 0 0 6 6 4 1 Ethanolamine utilisation - propanediol utilisation Cytidylate_kin PF02224.18 CCF75305.1 - 0.00023 21.0 0.0 0.41 10.4 0.0 4.6 4 0 0 4 4 4 1 Cytidylate kinase NACHT PF05729.12 CCF75305.1 - 0.00024 21.1 6.9 2.6 7.9 0.0 6.2 8 1 0 8 8 5 1 NACHT domain TIP49 PF06068.13 CCF75305.1 - 0.00025 20.4 0.3 0.62 9.2 0.0 4.8 5 0 0 5 5 5 1 TIP49 P-loop domain ATP_bind_1 PF03029.17 CCF75305.1 - 0.00036 20.4 6.3 11 5.8 0.0 6.0 6 0 0 6 6 6 0 Conserved hypothetical ATP binding protein dNK PF01712.19 CCF75305.1 - 0.00043 20.2 5.1 1.8 8.4 0.0 5.7 5 0 0 5 5 5 1 Deoxynucleoside kinase IstB_IS21 PF01695.17 CCF75305.1 - 0.00046 20.0 0.1 19 4.9 0.0 5.1 5 0 0 5 5 4 0 IstB-like ATP binding protein Roc PF08477.13 CCF75305.1 - 0.0018 18.5 2.7 6.5 7.0 0.0 5.0 5 0 0 5 5 4 0 Ras of Complex, Roc, domain of DAPkinase ATPase_2 PF01637.18 CCF75305.1 - 0.0038 17.2 13.0 1.1 9.2 0.0 6.6 9 0 0 9 9 5 2 ATPase domain predominantly from Archaea FtsK_SpoIIIE PF01580.18 CCF75305.1 - 0.0046 16.4 0.1 9.6 5.5 0.0 3.8 3 0 0 3 3 3 0 FtsK/SpoIIIE family DEAD PF00270.29 CCF75305.1 - 0.0051 16.6 0.0 8 6.2 0.0 4.1 4 0 0 4 4 3 0 DEAD/DEAH box helicase ATPase PF06745.13 CCF75305.1 - 0.025 13.9 0.7 0.35 10.2 0.0 3.1 3 0 0 3 3 3 0 KaiC AAA_11 PF13086.6 CCF75305.1 - 0.045 13.5 3.7 5 6.8 0.0 5.4 7 0 0 7 7 5 0 AAA domain ATP-synt_ab PF00006.25 CCF75305.1 - 0.065 12.9 0.0 5.9 6.5 0.0 3.4 3 1 0 3 3 3 0 ATP synthase alpha/beta family, nucleotide-binding domain Zeta_toxin PF06414.12 CCF75305.1 - 0.16 11.2 0.0 81 2.4 0.0 4.3 5 0 0 5 5 4 0 Zeta toxin CelTOS PF18659.1 CCF75305.1 - 0.56 10.6 4.8 1.5 9.3 0.3 3.6 2 0 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites TPR_1 PF00515.28 CCF75306.1 - 1.5e-62 205.0 40.0 3.5e-10 39.3 1.0 9.4 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_2 PF07719.17 CCF75306.1 - 2.5e-54 177.0 29.5 1.3e-07 31.2 0.2 9.5 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_11 PF13414.6 CCF75306.1 - 8.4e-37 124.6 28.1 6.4e-10 38.6 0.5 8.4 6 2 2 8 8 8 6 TPR repeat TPR_8 PF13181.6 CCF75306.1 - 3.2e-34 114.3 32.9 3.7e-06 26.7 0.1 9.8 9 0 0 9 9 9 7 Tetratricopeptide repeat TPR_17 PF13431.6 CCF75306.1 - 1.5e-24 84.6 18.0 0.00012 22.2 0.1 8.3 7 0 0 7 7 7 5 Tetratricopeptide repeat TPR_12 PF13424.6 CCF75306.1 - 1.9e-23 82.5 11.9 4.8e-07 30.0 0.0 6.9 6 2 0 6 6 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 CCF75306.1 - 5.9e-22 76.5 0.3 0.0037 18.0 0.0 9.1 6 2 3 9 9 9 3 Tetratricopeptide repeat TPR_7 PF13176.6 CCF75306.1 - 6.6e-22 75.9 4.7 0.00017 21.4 0.0 8.3 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_16 PF13432.6 CCF75306.1 - 5.2e-20 71.8 0.7 0.00035 21.2 0.0 6.3 4 2 2 6 6 6 5 Tetratricopeptide repeat TPR_19 PF14559.6 CCF75306.1 - 7.5e-19 68.0 10.4 0.00094 19.6 0.1 7.3 4 2 2 6 6 6 5 Tetratricopeptide repeat STI1 PF17830.1 CCF75306.1 - 2.6e-18 65.7 3.6 8.1e-13 48.1 0.1 3.5 2 1 1 3 3 3 2 STI1 domain TPR_10 PF13374.6 CCF75306.1 - 4.7e-14 51.7 14.3 0.06 13.2 0.0 8.9 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_9 PF13371.6 CCF75306.1 - 7.4e-09 35.6 0.0 0.16 12.1 0.0 5.4 3 2 3 6 6 5 2 Tetratricopeptide repeat TPR_6 PF13174.6 CCF75306.1 - 5.4e-08 33.0 13.7 0.68 10.7 0.1 7.3 7 0 0 7 7 6 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 CCF75306.1 - 7.9e-08 32.3 22.4 0.046 13.8 0.1 6.8 8 0 0 8 8 7 3 Fis1 C-terminal tetratricopeptide repeat BTAD PF03704.17 CCF75306.1 - 1.1e-05 25.9 0.5 0.038 14.4 0.0 4.7 4 1 1 5 5 5 1 Bacterial transcriptional activator domain ANAPC3 PF12895.7 CCF75306.1 - 3.8e-05 23.8 15.7 0.51 10.6 0.3 5.8 3 3 3 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 MIT PF04212.18 CCF75306.1 - 5.1e-05 23.3 15.1 6.5 6.9 0.2 7.3 7 0 0 7 7 7 0 MIT (microtubule interacting and transport) domain SHNi-TPR PF10516.9 CCF75306.1 - 6.3e-05 22.3 1.1 5.6 6.5 0.0 6.3 7 0 0 7 7 7 1 SHNi-TPR TPR_20 PF14561.6 CCF75306.1 - 0.00034 20.9 0.7 2.3 8.6 0.0 4.6 4 1 1 5 5 4 1 Tetratricopeptide repeat DUF3856 PF12968.7 CCF75306.1 - 0.00075 19.6 7.5 2.5 8.1 0.2 5.3 3 3 0 3 3 3 1 Domain of Unknown Function (DUF3856) PPR PF01535.20 CCF75306.1 - 0.0012 18.9 9.4 0.93 9.9 0.3 5.7 5 0 0 5 5 4 1 PPR repeat NRBF2_MIT PF17169.4 CCF75306.1 - 0.0016 18.6 2.8 0.079 13.2 0.1 4.2 5 0 0 5 5 4 1 MIT domain of nuclear receptor-binding factor 2 TPR_15 PF13429.6 CCF75306.1 - 0.0019 17.4 6.4 3 7.0 0.0 5.0 2 2 3 6 6 6 2 Tetratricopeptide repeat DUF5113 PF17140.4 CCF75306.1 - 0.011 15.5 16.2 0.47 10.2 3.8 5.2 2 2 3 6 6 6 0 Domain of unknown function (DUF5113) Cas_Cas02710 PF09670.10 CCF75306.1 - 0.068 12.0 5.5 0.11 11.2 2.6 2.7 2 1 0 2 2 2 0 CRISPR-associated protein (Cas_Cas02710) TPR_3 PF07720.12 CCF75306.1 - 0.17 11.9 20.5 14 5.8 0.1 6.9 7 0 0 7 7 7 0 Tetratricopeptide repeat CCP_MauG PF03150.14 CCF75306.1 - 0.65 10.6 3.9 15 6.2 0.1 3.7 3 1 0 4 4 4 0 Di-haem cytochrome c peroxidase Mad3_BUB1_I PF08311.12 CCF75306.1 - 1.3 9.0 5.3 8.3 6.4 1.5 4.1 4 1 0 4 4 4 0 Mad3/BUB1 homology region 1 Strep_SA_rep PF06696.11 CCF75306.1 - 8.1 6.6 9.1 11 6.2 5.0 3.3 2 0 0 2 2 2 0 Streptococcal surface antigen repeat TGT PF01702.18 CCF75307.1 - 3.9e-21 75.6 0.2 6e-21 75.0 0.2 1.3 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase FNIP PF05725.12 CCF75307.1 - 2 8.7 6.3 1.7 8.9 0.2 3.5 3 2 1 4 4 4 0 FNIP Repeat Melibiase PF02065.18 CCF75308.1 - 0.013 14.4 0.0 0.018 14.0 0.0 1.1 1 0 0 1 1 1 0 Melibiase MRP-S23 PF10484.9 CCF75308.1 - 0.25 11.6 2.7 0.68 10.2 2.7 1.7 1 1 0 1 1 1 0 Mitochondrial ribosomal protein S23 NuA4 PF09340.10 CCF75310.1 - 2.3e-06 27.4 3.6 5.3e-06 26.2 0.0 3.1 2 1 1 3 3 3 1 Histone acetyltransferase subunit NuA4 Cmc1 PF08583.10 CCF75310.1 - 0.00032 20.6 1.5 0.00032 20.6 1.5 2.3 2 0 0 2 2 2 1 Cytochrome c oxidase biogenesis protein Cmc1 like NDUF_B7 PF05676.13 CCF75310.1 - 1.2 8.9 7.5 0.056 13.2 1.6 1.9 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) YchF-GTPase_C PF06071.13 CCF75311.1 - 3.6e-40 136.0 2.4 6.4e-40 135.2 0.1 2.4 3 0 0 3 3 3 1 Protein of unknown function (DUF933) MMR_HSR1 PF01926.23 CCF75311.1 - 2.6e-15 56.5 0.0 5.5e-15 55.5 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF75311.1 - 0.00077 19.0 0.3 0.0025 17.3 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B Noelin-1 PF12308.8 CCF75311.1 - 0.022 14.7 0.5 1.6 8.7 0.2 2.2 2 0 0 2 2 2 0 Neurogenesis glycoprotein TGS PF02824.21 CCF75311.1 - 0.071 13.2 0.0 0.31 11.1 0.0 2.0 2 0 0 2 2 2 0 TGS domain MeaB PF03308.16 CCF75311.1 - 0.18 10.8 0.9 0.28 10.1 0.0 1.7 2 1 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Cwf_Cwc_15 PF04889.12 CCF75312.1 - 4.3e-40 138.0 13.7 2.9e-39 135.3 13.7 1.9 1 1 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein YL1 PF05764.13 CCF75312.1 - 0.66 10.0 14.8 0.88 9.6 14.8 1.1 1 0 0 1 1 1 0 YL1 nuclear protein BING4CT PF08149.11 CCF75313.1 - 1.8e-29 101.4 2.8 1.6e-27 95.1 0.0 3.0 3 0 0 3 3 3 2 BING4CT (NUC141) domain WD40 PF00400.32 CCF75313.1 - 2.4e-06 28.2 3.0 0.00099 19.9 0.1 4.3 4 1 1 5 5 5 1 WD domain, G-beta repeat DUF4768 PF15989.5 CCF75313.1 - 0.055 13.4 0.2 0.19 11.7 0.2 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) DUF2423 PF10338.9 CCF75313.1 - 0.54 10.5 5.3 1.5 9.1 5.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2423) DNA_pol_E_B PF04042.16 CCF75314.1 - 1.6e-24 86.5 0.9 2.5e-24 85.8 0.9 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B SMK-1 PF04802.15 CCF75315.1 - 3e-20 72.9 7.9 7.8e-20 71.5 7.9 1.7 1 0 0 1 1 1 1 Component of IIS longevity pathway SMK-1 Phlebovirus_G1 PF07243.11 CCF75316.1 - 0.072 11.5 0.2 0.099 11.0 0.2 1.1 1 0 0 1 1 1 0 Phlebovirus glycoprotein G1 Toast_rack_N PF17115.5 CCF75316.1 - 0.077 13.3 0.1 0.59 10.5 0.0 2.2 3 0 0 3 3 3 0 N-terminal domain of toast_rack, DUF2154 CSD PF00313.22 CCF75318.1 - 1.5e-21 76.0 0.1 1.9e-21 75.7 0.1 1.1 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 CCF75318.1 - 0.0084 15.8 0.0 0.018 14.7 0.0 1.5 1 0 0 1 1 1 1 Ribonuclease B OB domain TNF PF00229.18 CCF75318.1 - 0.022 14.7 0.0 0.03 14.3 0.0 1.2 1 0 0 1 1 1 0 TNF(Tumour Necrosis Factor) family S1 PF00575.23 CCF75318.1 - 0.025 14.9 0.1 0.038 14.3 0.1 1.3 1 0 0 1 1 1 0 S1 RNA binding domain DUF190 PF02641.15 CCF75318.1 - 0.1 12.9 0.0 0.14 12.5 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized ACR, COG1993 ATP-synt_ab PF00006.25 CCF75319.1 - 1.3e-71 240.6 0.0 2e-71 240.0 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 CCF75319.1 - 1.2e-41 141.9 0.3 2.4e-41 141.0 0.3 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 CCF75319.1 - 1e-15 58.0 3.9 2.6e-15 56.7 3.9 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 CCF75319.1 - 0.00065 19.8 1.4 0.0012 19.0 1.4 1.5 1 0 0 1 1 1 1 HAS barrel domain DUF3659 PF12396.8 CCF75319.1 - 0.12 12.3 1.4 0.28 11.1 0.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF3659) Sec1 PF00995.23 CCF75321.1 - 8.9e-99 332.3 17.7 1e-98 332.0 17.7 1.0 1 0 0 1 1 1 1 Sec1 family Ribosomal_S30 PF04758.14 CCF75322.1 - 2.7e-26 91.5 5.8 3e-26 91.4 5.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 RFC1 PF08519.12 CCF75324.1 - 9.4e-27 94.1 0.0 2.3e-26 92.8 0.0 1.7 1 0 0 1 1 1 1 Replication factor RFC1 C terminal domain AAA PF00004.29 CCF75324.1 - 1.3e-10 41.8 0.0 3.9e-10 40.3 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) BRCT PF00533.26 CCF75324.1 - 5.1e-08 33.2 0.0 2.1e-07 31.2 0.0 2.0 1 0 0 1 1 1 1 BRCA1 C Terminus (BRCT) domain Rad17 PF03215.15 CCF75324.1 - 3.3e-06 27.2 1.6 5.4e-06 26.5 0.1 2.1 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_14 PF13173.6 CCF75324.1 - 0.00088 19.3 0.0 0.0055 16.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_17 PF13207.6 CCF75324.1 - 0.0022 18.4 0.0 0.26 11.7 0.0 2.8 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 CCF75324.1 - 0.0049 17.3 0.0 0.01 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 CCF75324.1 - 0.0058 16.4 0.0 0.015 15.0 0.0 1.7 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 CCF75324.1 - 0.0073 16.8 0.2 0.042 14.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CCF75324.1 - 0.0097 16.2 0.0 0.044 14.1 0.0 2.1 2 0 0 2 2 2 1 AAA domain DNA_pol3_delta PF06144.13 CCF75324.1 - 0.0099 15.7 0.0 0.04 13.7 0.0 2.0 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_5 PF07728.14 CCF75324.1 - 0.022 14.8 0.0 0.052 13.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 CCF75324.1 - 0.048 13.6 0.4 0.48 10.3 0.0 2.7 2 1 0 3 3 3 0 NTPase AAA_assoc_2 PF16193.5 CCF75324.1 - 0.049 14.0 0.0 0.16 12.3 0.0 1.9 1 0 0 1 1 1 0 AAA C-terminal domain AAA_33 PF13671.6 CCF75324.1 - 0.16 12.1 0.0 0.41 10.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain Serum_albumin PF00273.20 CCF75324.1 - 0.32 10.8 8.1 0.5 10.1 1.4 2.5 2 0 0 2 2 2 0 Serum albumin family Peptidase_U4 PF03419.13 CCF75325.1 - 0.01 15.1 0.8 0.066 12.5 0.1 2.0 2 0 0 2 2 2 0 Sporulation factor SpoIIGA WD40_like PF17005.5 CCF75326.1 - 6.7e-07 28.9 1.5 6.7e-07 28.9 1.5 1.8 2 1 0 2 2 2 1 WD40-like domain ANAPC4_WD40 PF12894.7 CCF75326.1 - 1.9e-05 24.9 2.6 0.0039 17.4 0.6 3.0 1 1 2 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF75326.1 - 0.0001 23.0 2.4 0.31 12.0 0.0 4.5 4 0 0 4 4 4 1 WD domain, G-beta repeat BBS2_Mid PF14783.6 CCF75326.1 - 0.00086 19.3 0.3 0.14 12.2 0.2 2.7 1 1 1 2 2 2 2 Ciliary BBSome complex subunit 2, middle region Cytochrom_D1 PF02239.16 CCF75326.1 - 0.028 13.0 0.0 0.051 12.1 0.0 1.4 1 0 0 1 1 1 0 Cytochrome D1 heme domain PQQ_3 PF13570.6 CCF75326.1 - 0.1 13.1 0.0 27 5.4 0.0 4.1 5 0 0 5 5 5 0 PQQ-like domain Fcf1 PF04900.12 CCF75327.1 - 7.6e-10 39.1 1.8 1.2e-09 38.4 0.1 2.1 2 0 0 2 2 2 1 Fcf1 EMG1 PF03587.14 CCF75329.1 - 1.4e-29 103.1 2.9 2.4e-29 102.4 2.9 1.4 1 1 0 1 1 1 1 EMG1/NEP1 methyltransferase E2_bind PF08825.10 CCF75329.1 - 0.079 13.1 0.3 2.4 8.3 0.0 2.5 2 0 0 2 2 2 0 E2 binding domain HisKA PF00512.25 CCF75329.1 - 0.12 12.4 0.0 0.25 11.4 0.0 1.5 1 0 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Plus-3 PF03126.18 CCF75330.1 - 0.00021 21.8 0.1 0.0059 17.1 0.0 3.4 2 1 0 2 2 2 1 Plus-3 domain FliT PF05400.13 CCF75330.1 - 1.9 9.4 6.0 3.6 8.5 0.0 2.9 2 1 1 3 3 3 0 Flagellar protein FliT Med31 PF05669.12 CCF75331.1 - 1e-20 73.5 2.9 1e-20 73.5 2.9 2.1 2 0 0 2 2 2 1 SOH1 ubiquitin PF00240.23 CCF75332.1 - 1.2e-07 31.3 0.1 2.3e-07 30.4 0.1 1.5 1 1 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 CCF75332.1 - 0.00051 20.4 0.2 0.0023 18.3 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 CCF75332.1 - 0.019 15.0 0.5 0.18 11.9 0.3 1.9 1 1 1 2 2 2 0 Ubiquitin-like domain HCBP_related PF06594.11 CCF75332.1 - 0.2 11.6 1.0 0.3 11.1 0.1 1.9 2 1 0 2 2 2 0 Haemolysin-type calcium binding protein related domain DHHC PF01529.20 CCF75333.1 - 3.9e-35 120.9 13.4 3.9e-35 120.9 13.4 2.1 2 1 0 2 2 2 1 DHHC palmitoyltransferase UPF0242 PF06785.11 CCF75333.1 - 0.0088 16.2 4.4 0.017 15.2 4.4 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0242) N-terminus Ninjurin PF04923.12 CCF75333.1 - 0.38 10.7 2.9 1 9.3 2.9 1.8 1 1 0 1 1 1 0 Ninjurin Bromo_TP PF07524.13 CCF75334.1 - 1.6e-05 24.8 0.0 2.8e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Bromodomain associated RPA_interact_C PF14768.6 CCF75334.1 - 0.1 13.2 0.0 0.22 12.1 0.0 1.5 1 0 0 1 1 1 0 Replication protein A interacting C-terminal DUF3395 PF11875.8 CCF75335.1 - 1.7e-17 63.7 0.0 7.3e-17 61.7 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF3395) DnaJ PF00226.31 CCF75335.1 - 3.4e-16 59.1 0.3 7.5e-16 58.0 0.3 1.6 1 0 0 1 1 1 1 DnaJ domain IPK PF03770.16 CCF75336.1 - 1.7e-08 34.5 0.0 3.5e-08 33.5 0.0 1.5 1 1 0 1 1 1 1 Inositol polyphosphate kinase P4Ha_N PF08336.11 CCF75336.1 - 0.025 14.6 0.1 0.051 13.6 0.1 1.5 1 0 0 1 1 1 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region BrkDBD PF09607.10 CCF75336.1 - 0.083 12.7 0.3 0.34 10.7 0.0 2.1 2 0 0 2 2 2 0 Brinker DNA-binding domain zf-CW PF07496.15 CCF75336.1 - 0.16 12.0 0.7 6.1 6.9 0.1 2.5 2 0 0 2 2 2 0 CW-type Zinc Finger Rib_5-P_isom_A PF06026.14 CCF75337.1 - 9.7e-58 194.6 0.4 1.3e-57 194.2 0.4 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Synaptobrevin PF00957.21 CCF75338.1 - 0.00062 19.5 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Synaptobrevin E3_UFM1_ligase PF09743.9 CCF75339.1 - 4.1e-41 141.4 9.4 4.1e-41 141.4 9.4 2.3 3 0 0 3 3 3 1 E3 UFM1-protein ligase 1 CS PF04969.16 CCF75340.1 - 6.5e-10 39.9 0.8 1.1e-09 39.1 0.8 1.4 1 0 0 1 1 1 1 CS domain SGS PF05002.15 CCF75340.1 - 0.00038 20.5 0.5 0.001 19.2 0.2 1.9 2 0 0 2 2 2 1 SGS domain CTP_transf_like PF01467.26 CCF75341.1 - 9.5e-11 42.1 0.0 2.5e-10 40.7 0.0 1.7 1 1 1 2 2 2 1 Cytidylyltransferase-like Helicase_C_2 PF13307.6 CCF75343.1 - 2e-39 135.5 0.0 4.6e-39 134.3 0.0 1.6 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 CCF75343.1 - 4.2e-33 114.4 3.7 1.6e-32 112.6 3.7 2.0 1 0 0 1 1 1 1 DEAD_2 ResIII PF04851.15 CCF75343.1 - 1.2e-05 25.4 0.1 0.023 14.7 0.0 3.2 1 1 1 2 2 2 2 Type III restriction enzyme, res subunit DEAD PF00270.29 CCF75343.1 - 0.006 16.4 0.0 0.39 10.5 0.0 2.6 2 1 0 2 2 2 1 DEAD/DEAH box helicase Sde2_N_Ubi PF13019.6 CCF75344.1 - 2.5e-18 66.5 0.0 4.1e-18 65.8 0.0 1.3 1 0 0 1 1 1 1 Silencing defective 2 N-terminal ubiquitin domain SAC3_GANP PF03399.16 CCF75345.1 - 3.7e-13 49.5 9.2 1.7e-11 44.0 9.2 2.6 1 1 0 1 1 1 1 SAC3/GANP family CNDH2_C PF16858.5 CCF75345.1 - 0.44 10.4 9.0 0.032 14.1 1.0 2.3 2 0 0 2 2 2 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term Prenyltrans PF00432.21 CCF75346.1 - 8.9e-52 172.5 6.9 4.6e-11 42.3 0.0 5.9 6 0 0 6 6 6 5 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 CCF75346.1 - 1.1e-05 24.7 0.0 0.0035 16.5 0.0 3.6 2 1 2 4 4 4 1 Squalene-hopene cyclase N-terminal domain SQHop_cyclase_C PF13243.6 CCF75346.1 - 0.024 13.7 0.0 1.6 7.8 0.0 2.8 1 1 1 3 3 3 0 Squalene-hopene cyclase C-terminal domain MMR_HSR1 PF01926.23 CCF75347.1 - 2.5e-40 137.1 5.9 7.3e-20 71.2 0.2 3.7 3 1 0 3 3 3 2 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF75347.1 - 2.1e-20 72.9 8.3 9e-12 44.8 1.8 2.9 2 1 1 3 3 3 2 Ferrous iron transport protein B KH_dom-like PF14714.6 CCF75347.1 - 8.7e-14 51.6 0.2 3.1e-13 49.9 0.2 2.0 1 1 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GTP_EFTU PF00009.27 CCF75347.1 - 7.9e-12 45.1 5.8 2.4e-09 37.0 0.7 3.9 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain AIG1 PF04548.16 CCF75347.1 - 1.3e-09 37.7 11.5 1.2e-05 24.7 0.6 2.9 3 0 0 3 3 3 2 AIG1 family Dynamin_N PF00350.23 CCF75347.1 - 1e-08 35.5 8.2 0.026 14.6 0.1 4.8 3 1 1 4 4 4 3 Dynamin family RsgA_GTPase PF03193.16 CCF75347.1 - 8e-07 29.1 2.3 0.034 14.1 0.0 3.8 4 0 0 4 4 4 2 RsgA GTPase SRPRB PF09439.10 CCF75347.1 - 1.7e-05 24.3 4.1 0.0034 16.8 0.1 3.2 2 1 0 2 2 2 2 Signal recognition particle receptor beta subunit Roc PF08477.13 CCF75347.1 - 3e-05 24.2 2.3 0.12 12.6 0.1 3.6 3 1 0 3 3 3 2 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 CCF75347.1 - 0.0002 21.0 6.4 0.0095 15.5 0.7 3.5 2 1 1 3 3 3 2 Ras family Arf PF00025.21 CCF75347.1 - 0.0089 15.5 5.7 0.07 12.6 1.1 3.8 3 1 0 3 3 3 1 ADP-ribosylation factor family MMR_HSR1_Xtn PF16897.5 CCF75347.1 - 0.057 13.4 11.6 2.4 8.2 0.8 4.5 4 1 0 4 4 4 0 C-terminal region of MMR_HSR1 domain DUF2789 PF10982.8 CCF75347.1 - 0.11 12.7 0.1 2 8.7 0.1 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2789) DUF126 PF01989.16 CCF75347.1 - 0.17 11.7 0.0 0.63 9.9 0.0 2.0 1 0 0 1 1 1 0 Aconitase X swivel domain TniB PF05621.11 CCF75347.1 - 0.97 8.8 3.1 7.3 5.9 0.0 2.9 3 1 0 3 3 3 0 Bacterial TniB protein zf-CSL PF05207.13 CCF75348.1 - 5.3e-08 32.5 1.4 8.6e-08 31.8 1.4 1.4 1 0 0 1 1 1 1 CSL zinc finger YGGT PF02325.17 CCF75349.1 - 8.5e-08 32.5 2.1 8.5e-08 32.5 2.1 1.6 2 0 0 2 2 2 1 YGGT family ESCRT-II PF05871.12 CCF75350.1 - 1.1e-15 58.1 0.3 8.5e-15 55.2 0.3 2.1 1 1 0 1 1 1 1 ESCRT-II complex subunit DDRGK PF09756.9 CCF75351.1 - 9.6e-35 119.9 23.1 9.6e-35 119.9 23.1 1.8 1 1 1 2 2 2 1 DDRGK domain FtsH_ext PF06480.15 CCF75351.1 - 0.012 15.9 0.1 0.12 12.7 0.0 2.4 2 0 0 2 2 2 0 FtsH Extracellular SID-1_RNA_chan PF13965.6 CCF75351.1 - 0.013 14.0 3.3 0.018 13.4 3.3 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 DUF997 PF06196.12 CCF75351.1 - 0.032 14.2 0.1 0.064 13.3 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF997) Ribosomal_L13 PF00572.18 CCF75351.1 - 0.086 13.1 3.3 0.87 9.8 2.2 2.2 2 0 0 2 2 2 0 Ribosomal protein L13 MAP17 PF15807.5 CCF75351.1 - 0.11 12.7 3.6 0.23 11.7 3.6 1.6 1 0 0 1 1 1 0 Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 CSG2 PF16965.5 CCF75351.1 - 0.34 9.8 1.1 0.49 9.3 1.1 1.2 1 0 0 1 1 1 0 Ceramide synthase regulator Zip PF02535.22 CCF75351.1 - 0.35 10.0 0.4 0.36 10.0 0.4 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 CCF75351.1 - 0.54 9.0 3.5 0.72 8.6 3.5 1.2 1 0 0 1 1 1 0 Presenilin MscL PF01741.18 CCF75351.1 - 0.98 9.7 4.2 3.4 8.0 4.2 2.0 1 1 0 1 1 1 0 Large-conductance mechanosensitive channel, MscL O-antigen_lig PF13425.6 CCF75351.1 - 2.2 7.0 9.2 0.47 9.2 6.1 1.4 2 0 0 2 2 2 0 O-antigen ligase like membrane protein PolyA_pol PF01743.20 CCF75352.1 - 1.2e-27 96.8 0.1 4.5e-27 95.0 0.1 2.0 2 0 0 2 2 2 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 CCF75352.1 - 0.097 12.4 0.0 0.18 11.6 0.0 1.4 1 0 0 1 1 1 0 Probable RNA and SrmB- binding site of polymerase A Ppx-GppA PF02541.16 CCF75354.1 - 0.084 12.3 0.0 0.16 11.4 0.0 1.4 1 0 0 1 1 1 0 Ppx/GppA phosphatase family cNMP_binding PF00027.29 CCF75355.1 - 8.5e-59 195.6 0.0 3.6e-17 62.2 0.0 4.5 4 0 0 4 4 4 4 Cyclic nucleotide-binding domain Pkinase PF00069.25 CCF75355.1 - 2.2e-57 194.4 0.0 4e-57 193.6 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75355.1 - 2.2e-28 99.3 0.0 3.9e-28 98.5 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF75355.1 - 5e-07 29.3 0.0 8.6e-07 28.6 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 CCF75355.1 - 0.0034 16.8 0.0 0.0071 15.7 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 CCF75355.1 - 0.0042 15.9 0.0 0.0069 15.2 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 CCF75355.1 - 0.011 14.8 1.2 0.014 14.4 0.1 1.6 2 0 0 2 2 2 0 Haspin like kinase domain APH PF01636.23 CCF75355.1 - 0.016 15.2 0.0 0.025 14.5 0.0 1.2 1 0 0 1 1 1 0 Phosphotransferase enzyme family Cupin_2 PF07883.11 CCF75355.1 - 0.23 11.2 0.9 13 5.6 0.0 3.4 4 0 0 4 4 4 0 Cupin domain Metallophos PF00149.28 CCF75356.1 - 4.6e-09 37.1 0.9 7e-09 36.5 0.9 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Zip PF02535.22 CCF75357.1 - 6.9e-14 51.8 13.4 3.7e-10 39.5 9.6 2.1 2 0 0 2 2 2 2 ZIP Zinc transporter DUF2456 PF10445.9 CCF75357.1 - 3.8 7.6 11.2 0.19 11.8 1.2 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF2456) Cyt-b5 PF00173.28 CCF75358.1 - 5e-23 81.0 0.1 6.5e-23 80.7 0.1 1.1 1 0 0 1 1 1 1 Cytochrome b5-like Heme/Steroid binding domain Ribosomal_L3 PF00297.22 CCF75359.1 - 3.4e-17 62.5 3.8 1.7e-15 56.9 1.7 2.1 1 1 1 2 2 2 2 Ribosomal protein L3 RRM_1 PF00076.22 CCF75360.1 - 3.6e-26 90.8 0.7 8.7e-13 47.9 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF75360.1 - 1.7e-09 37.6 0.1 0.00056 20.0 0.0 2.7 2 0 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 CCF75360.1 - 1.8e-05 24.7 0.1 0.12 12.3 0.0 2.6 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif LSM PF01423.22 CCF75361.1 - 1e-15 57.1 0.1 1.6e-15 56.5 0.1 1.3 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 CCF75361.1 - 6.2e-05 23.1 0.0 0.00017 21.7 0.0 1.8 1 1 0 1 1 1 1 Ataxin 2 SM domain Telomerase_RBD PF12009.8 CCF75365.1 - 5e-28 97.9 3.4 5e-28 97.9 3.4 2.6 3 0 0 3 3 3 1 Telomerase ribonucleoprotein complex - RNA binding domain RVT_1 PF00078.27 CCF75365.1 - 7e-11 42.1 1.7 1.9e-08 34.1 0.2 2.8 2 0 0 2 2 2 2 Reverse transcriptase (RNA-dependent DNA polymerase) Macro PF01661.21 CCF75366.1 - 0.048 13.7 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Macro domain Consortin_C PF15281.6 CCF75368.1 - 0.04 13.9 0.0 0.055 13.5 0.0 1.3 1 0 0 1 1 1 0 Consortin C-terminus ECSCR PF15820.5 CCF75368.1 - 0.077 12.8 0.1 0.1 12.5 0.1 1.2 1 0 0 1 1 1 0 Endothelial cell-specific chemotaxis regulator CD34_antigen PF06365.12 CCF75368.1 - 0.12 12.0 0.1 0.13 11.9 0.1 1.1 1 0 0 1 1 1 0 CD34/Podocalyxin family GDPD PF03009.17 CCF75369.1 - 0.061 13.1 0.7 0.086 12.6 0.7 1.1 1 0 0 1 1 1 0 Glycerophosphoryl diester phosphodiesterase family AP2 PF00847.20 CCF75372.1 - 5.6e-29 100.1 11.0 1.4e-14 54.0 0.3 2.8 3 0 0 3 3 3 2 AP2 domain DUF4983 PF16356.5 CCF75372.1 - 0.44 11.4 6.7 1.2 10.0 0.5 3.9 3 1 1 4 4 4 0 Domain of unknown function (DUF4983) CpXC PF14353.6 CCF75373.1 - 0.052 13.6 0.0 0.071 13.2 0.0 1.3 1 0 0 1 1 1 0 CpXC protein Ribonuc_red_lgC PF02867.15 CCF75374.1 - 2.1e-184 613.9 0.0 2.8e-184 613.5 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 CCF75374.1 - 1.1e-21 76.6 0.0 2.3e-21 75.6 0.0 1.6 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 CCF75374.1 - 7.8e-13 48.8 0.0 2.7e-12 47.1 0.0 1.9 2 0 0 2 2 2 1 ATP cone domain CLP_protease PF00574.23 CCF75376.1 - 1.4e-41 142.3 0.4 2.2e-40 138.5 0.4 2.3 1 1 0 1 1 1 1 Clp protease Glyco_hydro_4C PF11975.8 CCF75376.1 - 0.097 12.7 0.2 0.38 10.8 0.2 2.0 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase C-terminal domain E1_dh PF00676.20 CCF75377.1 - 4.6e-79 265.5 0.0 5.9e-79 265.1 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component DUF4219 PF13961.6 CCF75377.1 - 0.25 11.1 0.6 0.76 9.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4219) FANCI_S2 PF14676.6 CCF75378.1 - 0.08 13.2 4.8 2.9 8.2 0.5 2.5 2 1 0 2 2 2 0 FANCI solenoid 2 MRP-S28 PF10213.9 CCF75379.1 - 2.1e-07 31.4 0.0 5e-07 30.2 0.0 1.7 2 0 0 2 2 2 1 Mitochondrial ribosomal subunit protein GYF PF02213.16 CCF75380.1 - 1e-06 28.3 0.2 1.9e-06 27.4 0.2 1.5 1 0 0 1 1 1 1 GYF domain ATP-synt_ab PF00006.25 CCF75381.1 - 6.8e-98 326.5 0.0 1.1e-97 325.8 0.0 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 CCF75381.1 - 1.3e-40 138.0 0.1 2.9e-40 136.9 0.0 1.7 2 0 0 2 2 2 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 CCF75381.1 - 2.8e-11 43.8 0.3 8.9e-11 42.2 0.3 2.0 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain PhoU_div PF01865.16 CCF75381.1 - 0.027 13.8 0.3 0.05 12.9 0.3 1.3 1 0 0 1 1 1 0 Protein of unknown function DUF47 Thi4 PF01946.17 CCF75381.1 - 0.042 13.1 0.1 0.1 11.8 0.0 1.6 2 0 0 2 2 2 0 Thi4 family Flagellar_rod PF05149.12 CCF75381.1 - 0.13 11.7 0.2 0.21 11.0 0.2 1.2 1 0 0 1 1 1 0 Paraflagellar rod protein SeqA_N PF17206.3 CCF75382.1 - 0.043 13.1 1.6 7.9 5.9 0.0 3.4 3 0 0 3 3 3 0 SeqA protein N-terminal domain Cytochrom_C PF00034.21 CCF75383.1 - 2.2e-08 35.1 0.0 3.9e-08 34.3 0.0 1.4 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 CCF75383.1 - 1e-05 25.8 0.1 1.4e-05 25.3 0.1 1.5 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 CCF75383.1 - 0.00014 21.5 0.0 0.0049 16.6 0.0 2.2 2 0 0 2 2 2 1 Cytochrome c-550 domain Cytochrom_C1 PF02167.15 CCF75383.1 - 0.029 14.1 0.0 0.049 13.4 0.0 1.3 1 0 0 1 1 1 0 Cytochrome C1 family Haem_bd PF14376.6 CCF75383.1 - 0.13 12.2 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Haem-binding domain UCH PF00443.29 CCF75384.1 - 2.2e-37 128.9 2.3 2.7e-37 128.7 2.3 1.1 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 CCF75384.1 - 4.3e-08 33.1 0.6 4.3e-08 33.1 0.6 2.1 1 1 0 2 2 2 1 Ubiquitin carboxyl-terminal hydrolase Euplotes_phero PF05842.11 CCF75384.1 - 0.023 15.3 2.0 0.023 15.3 2.0 2.2 3 0 0 3 3 3 0 Euplotes octocarinatus mating pheromone protein zf-SNAP50_C PF12251.8 CCF75385.1 - 0.035 13.8 2.1 1.9 8.1 0.2 2.4 2 0 0 2 2 2 0 snRNA-activating protein of 50kDa MW C terminal ICAT PF06384.11 CCF75385.1 - 0.093 13.0 0.0 0.35 11.1 0.0 2.0 1 0 0 1 1 1 0 Beta-catenin-interacting protein ICAT Ribosomal_60s PF00428.19 CCF75386.1 - 1.7e-20 73.4 4.3 2e-20 73.1 4.3 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein DEAD PF00270.29 CCF75387.1 - 2.2e-11 43.9 0.2 5.1e-11 42.6 0.2 1.6 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA PF00004.29 CCF75387.1 - 8.8e-07 29.4 0.4 4.4e-06 27.1 0.4 2.1 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 CCF75387.1 - 5.2e-05 23.5 0.2 0.00022 21.5 0.1 2.2 1 1 1 2 2 2 1 AAA domain ResIII PF04851.15 CCF75387.1 - 0.00051 20.1 0.2 0.0015 18.6 0.1 1.8 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_24 PF13479.6 CCF75387.1 - 0.0006 19.6 1.7 0.0027 17.5 1.5 2.1 1 1 0 1 1 1 1 AAA domain Helicase_C PF00271.31 CCF75387.1 - 0.0012 19.2 2.6 0.004 17.5 0.2 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain AAA_19 PF13245.6 CCF75387.1 - 0.0059 16.9 0.1 0.23 11.8 0.0 2.7 2 2 0 2 2 2 1 AAA domain NACHT PF05729.12 CCF75387.1 - 0.007 16.3 0.5 0.036 14.0 0.5 2.1 1 1 1 2 2 2 1 NACHT domain AAA_25 PF13481.6 CCF75387.1 - 0.015 14.9 0.0 0.029 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_11 PF13086.6 CCF75387.1 - 0.026 14.3 0.7 0.11 12.3 0.7 2.1 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 CCF75387.1 - 0.033 13.9 1.2 0.1 12.4 0.0 2.5 3 1 0 3 3 3 0 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CCF75387.1 - 0.035 14.5 0.0 0.069 13.5 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain EGL-1 PF11430.8 CCF75387.1 - 0.25 11.2 1.3 1.3 9.0 0.3 2.3 2 0 0 2 2 2 0 Programmed cell death activator EGL-1 Maf PF02545.14 CCF75389.1 - 6.5e-34 117.2 0.0 7.5e-34 117.0 0.0 1.0 1 0 0 1 1 1 1 Maf-like protein DUF1837 PF08878.11 CCF75389.1 - 0.018 14.9 0.7 0.023 14.5 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1837) B-block_TFIIIC PF04182.12 CCF75390.1 - 6.3e-16 58.3 6.0 1.7e-14 53.7 0.7 3.8 4 0 0 4 4 4 2 B-block binding subunit of TFIIIC Enolase_C PF00113.22 CCF75391.1 - 3.6e-149 495.9 0.6 4.9e-149 495.5 0.6 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 CCF75391.1 - 1.1e-48 164.7 0.0 1.9e-48 164.0 0.0 1.3 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 CCF75391.1 - 1.1e-10 41.5 0.0 1.6e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 CCF75391.1 - 1e-05 24.9 0.2 1.7e-05 24.1 0.2 1.3 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus TUDOR PF00567.24 CCF75392.1 - 0.03 14.4 0.1 0.076 13.1 0.0 1.7 2 0 0 2 2 2 0 Tudor domain GNAT_acetyltr_2 PF13718.6 CCF75392.1 - 0.044 13.2 0.1 0.076 12.4 0.1 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase 2 BSD PF03909.17 CCF75393.1 - 1.9e-05 24.5 4.2 0.0071 16.3 0.4 3.3 3 0 0 3 3 3 2 BSD domain SART-1 PF03343.13 CCF75394.1 - 3.9e-64 217.3 6.4 4.4e-44 151.1 0.5 2.3 1 1 1 2 2 2 2 SART-1 family DUF1936 PF09151.10 CCF75394.1 - 0.28 11.1 0.7 1.4 8.9 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF1936) Sel1 PF08238.12 CCF75396.1 - 1.1e-07 32.2 6.3 0.49 11.2 0.0 7.1 8 1 0 8 8 7 2 Sel1 repeat TPR_17 PF13431.6 CCF75396.1 - 5e-06 26.5 0.7 0.95 10.0 0.1 5.3 4 1 1 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 CCF75396.1 - 0.00058 19.7 4.4 0.84 9.8 0.2 5.2 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_14 PF13428.6 CCF75396.1 - 0.00089 19.9 4.7 0.18 12.7 1.0 4.6 4 1 1 5 5 4 1 Tetratricopeptide repeat TPR_2 PF07719.17 CCF75396.1 - 0.0014 18.6 0.2 0.093 12.9 0.1 4.2 5 0 0 5 5 3 1 Tetratricopeptide repeat TPR_6 PF13174.6 CCF75396.1 - 0.0023 18.4 7.1 20 6.1 0.0 5.8 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_1 PF00515.28 CCF75396.1 - 0.005 16.6 0.8 0.17 11.8 0.0 3.9 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 CCF75396.1 - 0.006 17.2 1.7 0.053 14.2 0.6 2.9 2 1 1 3 3 2 2 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF75396.1 - 0.019 15.2 7.0 0.19 12.0 0.7 4.5 4 1 1 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 CCF75396.1 - 0.035 14.4 4.4 0.29 11.4 0.3 4.0 4 1 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 CCF75396.1 - 0.069 13.4 5.1 7.6 7.0 0.0 5.7 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_10 PF13374.6 CCF75396.1 - 0.15 12.0 3.0 4.1 7.4 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_19 PF14559.6 CCF75396.1 - 0.16 12.5 11.3 0.32 11.6 4.5 4.3 3 3 1 4 4 4 0 Tetratricopeptide repeat Hydrolase_4 PF12146.8 CCF75399.1 - 2.6e-09 36.7 0.0 1.6e-05 24.3 0.0 2.1 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 CCF75399.1 - 3.2e-06 26.8 0.0 0.0015 18.1 0.0 2.9 2 1 0 2 2 2 1 Prolyl oligopeptidase family Abhydrolase_6 PF12697.7 CCF75399.1 - 1.1e-05 26.1 0.0 0.00058 20.5 0.0 2.1 1 1 1 2 2 2 1 Alpha/beta hydrolase family Abhydrolase_2 PF02230.16 CCF75399.1 - 1.7e-05 24.7 0.5 0.65 9.8 0.3 3.3 2 1 0 2 2 2 2 Phospholipase/Carboxylesterase Abhydrolase_1 PF00561.20 CCF75399.1 - 0.0013 18.4 0.6 0.062 12.9 0.4 2.1 2 0 0 2 2 2 1 alpha/beta hydrolase fold DLH PF01738.18 CCF75399.1 - 0.099 12.2 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Dienelactone hydrolase family Abhydrolase_3 PF07859.13 CCF75399.1 - 0.22 11.3 0.0 0.38 10.6 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold His_Phos_1 PF00300.22 CCF75400.1 - 4.9e-28 98.1 0.0 4.4e-13 49.4 0.0 3.1 2 1 1 3 3 3 3 Histidine phosphatase superfamily (branch 1) Exc PF07825.11 CCF75400.1 - 0.028 14.4 0.0 0.073 13.1 0.0 1.7 1 0 0 1 1 1 0 Excisionase-like protein Stap_Strp_toxin PF01123.20 CCF75400.1 - 0.16 12.9 0.0 3.1 8.7 0.0 2.3 2 0 0 2 2 2 0 Staphylococcal/Streptococcal toxin, OB-fold domain Acetyltransf_1 PF00583.25 CCF75401.1 - 2.4e-08 34.2 0.0 9.6e-08 32.3 0.0 1.9 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_4 PF13420.7 CCF75401.1 - 0.0011 19.1 0.0 0.0024 18.0 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 CCF75401.1 - 0.0067 16.4 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CCF75401.1 - 0.011 16.1 0.1 0.02 15.3 0.1 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain DnaJ PF00226.31 CCF75402.1 - 2.1e-22 79.0 3.5 2.5e-22 78.8 1.3 2.2 2 0 0 2 2 2 1 DnaJ domain Thioredoxin PF00085.20 CCF75402.1 - 2.9e-14 52.9 0.1 8.3e-14 51.4 0.1 1.8 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 CCF75402.1 - 0.012 15.9 0.4 0.075 13.4 0.1 2.5 2 1 0 2 2 2 0 Thioredoxin-like TPR_1 PF00515.28 CCF75403.1 - 4e-12 45.4 0.1 1.3e-08 34.3 0.0 3.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 CCF75403.1 - 3.9e-10 39.1 0.0 2e-06 27.5 0.0 2.8 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_17 PF13431.6 CCF75403.1 - 2e-08 34.0 0.1 0.0057 17.0 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF75403.1 - 4.5e-08 32.7 0.2 0.00026 21.0 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 CCF75403.1 - 4.4e-06 26.3 0.0 0.0014 18.2 0.0 2.8 2 0 0 2 2 2 1 TPR repeat TPR_7 PF13176.6 CCF75403.1 - 0.00057 19.7 0.0 1.9 8.7 0.0 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat DUF3996 PF13161.6 CCF75403.1 - 0.037 13.8 0.1 0.06 13.1 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3996) TPR_12 PF13424.6 CCF75403.1 - 0.052 13.8 0.0 0.34 11.2 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 CCF75403.1 - 0.11 12.6 0.1 21 5.3 0.0 2.5 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat RPN7 PF10602.9 CCF75403.1 - 0.12 12.0 0.3 0.93 9.2 0.1 2.1 1 1 1 2 2 2 0 26S proteasome subunit RPN7 DUF1712 PF08217.11 CCF75404.1 - 2e-09 36.6 0.6 2e-08 33.2 0.1 2.0 2 0 0 2 2 2 2 Fungal domain of unknown function (DUF1712) DUF4536 PF15055.6 CCF75405.1 - 1.1e-05 25.6 0.5 1.4e-05 25.2 0.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4536) HSP70 PF00012.20 CCF75408.1 - 8.5e-248 823.4 9.7 9.7e-248 823.3 9.7 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 CCF75408.1 - 1.1e-19 70.5 0.4 8.7e-19 67.5 0.1 2.0 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 CCF75408.1 - 0.00022 21.6 1.6 1.3 9.5 0.0 3.4 3 0 0 3 3 3 2 Cell division protein FtsA Radial_spoke_3 PF06098.11 CCF75408.1 - 0.0013 18.1 5.4 0.0023 17.3 5.4 1.3 1 0 0 1 1 1 1 Radial spoke protein 3 Hydantoinase_A PF01968.18 CCF75408.1 - 0.014 14.7 0.4 0.21 10.8 0.1 2.6 3 0 0 3 3 3 0 Hydantoinase/oxoprolinase FGGY_C PF02782.16 CCF75408.1 - 0.015 15.1 0.0 0.074 12.8 0.0 2.1 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain RMI1_C PF16099.5 CCF75408.1 - 0.1 12.5 0.1 0.23 11.3 0.1 1.6 1 0 0 1 1 1 0 Recq-mediated genome instability protein 1, C-terminal OB-fold GLE1 PF07817.13 CCF75408.1 - 0.11 11.7 0.9 0.5 9.5 0.0 2.3 3 0 0 3 3 3 0 GLE1-like protein Pkinase PF00069.25 CCF75409.1 - 4.7e-67 226.1 0.1 6.2e-67 225.7 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75409.1 - 1.7e-21 76.7 0.0 3.3e-21 75.7 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 CCF75409.1 - 1.1e-07 32.0 0.0 7.7e-06 26.0 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 CCF75409.1 - 0.00075 18.4 0.1 0.033 13.0 0.0 2.4 3 0 0 3 3 3 1 Fungal protein kinase Kdo PF06293.14 CCF75409.1 - 0.0032 16.9 0.0 0.0048 16.3 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 CCF75409.1 - 0.12 11.6 0.0 0.25 10.6 0.0 1.5 1 0 0 1 1 1 0 Kinase-like Aconitase_B_N PF11791.8 CCF75409.1 - 0.19 11.8 0.0 5 7.2 0.0 2.2 2 0 0 2 2 2 0 Aconitate B N-terminal domain Ligase_CoA PF00549.19 CCF75410.1 - 6.9e-22 77.9 0.1 1.3e-21 77.0 0.1 1.5 1 0 0 1 1 1 1 CoA-ligase CoA_binding PF02629.19 CCF75410.1 - 6e-19 68.5 0.0 2.1e-18 66.8 0.0 1.9 2 0 0 2 2 2 1 CoA binding domain Succ_CoA_lig PF13607.6 CCF75410.1 - 1.9e-09 37.4 0.0 3.4e-09 36.6 0.0 1.4 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 CCF75410.1 - 0.096 13.2 0.4 0.29 11.6 0.0 1.9 2 1 0 2 2 2 0 CoA binding domain RtcB PF01139.17 CCF75411.1 - 2.9e-142 474.7 0.1 3.6e-142 474.4 0.1 1.1 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Fic PF02661.18 CCF75412.1 - 0.031 15.2 0.5 0.088 13.7 0.2 1.9 2 0 0 2 2 2 0 Fic/DOC family TIP49 PF06068.13 CCF75413.1 - 4.2e-148 493.2 0.4 2.4e-75 254.0 0.0 2.1 2 0 0 2 2 2 2 TIP49 P-loop domain TIP49_C PF17856.1 CCF75413.1 - 4.6e-21 74.7 0.1 1.2e-20 73.4 0.1 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 CCF75413.1 - 1.4e-08 35.2 0.1 7.3e-07 29.7 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 CCF75413.1 - 6.1e-07 29.3 0.1 1.9e-05 24.5 0.0 2.5 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 CCF75413.1 - 0.00018 22.0 0.0 0.00038 20.9 0.0 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 CCF75413.1 - 0.00036 20.8 0.1 0.63 10.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 CCF75413.1 - 0.0013 18.7 0.0 0.0048 16.9 0.0 2.0 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) DnaB_C PF03796.15 CCF75413.1 - 0.0041 16.5 0.0 0.0065 15.8 0.0 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_25 PF13481.6 CCF75413.1 - 0.0041 16.7 0.7 0.0088 15.6 0.2 1.7 1 1 1 2 2 2 1 AAA domain AAA_7 PF12775.7 CCF75413.1 - 0.0051 16.3 0.0 0.0091 15.5 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 CCF75413.1 - 0.0059 16.4 0.0 0.013 15.3 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein Sigma54_activat PF00158.26 CCF75413.1 - 0.0064 16.2 0.1 0.049 13.3 0.0 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_33 PF13671.6 CCF75413.1 - 0.007 16.5 0.0 0.018 15.2 0.0 1.7 2 0 0 2 2 1 1 AAA domain ABC_tran PF00005.27 CCF75413.1 - 0.0076 16.8 0.1 0.026 15.0 0.1 1.7 1 1 0 1 1 1 1 ABC transporter AAA_23 PF13476.6 CCF75413.1 - 0.009 16.5 0.0 0.014 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain TsaE PF02367.17 CCF75413.1 - 0.0095 15.9 0.0 0.022 14.8 0.0 1.6 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 CCF75413.1 - 0.013 15.9 0.0 0.032 14.6 0.0 1.7 1 0 0 1 1 1 0 RNA helicase NACHT PF05729.12 CCF75413.1 - 0.017 15.0 0.0 0.041 13.8 0.0 1.7 1 0 0 1 1 1 0 NACHT domain Mg_chelatase PF01078.21 CCF75413.1 - 0.018 14.4 0.2 0.039 13.3 0.0 1.6 2 0 0 2 2 1 0 Magnesium chelatase, subunit ChlI PhoH PF02562.16 CCF75413.1 - 0.03 13.8 0.2 0.077 12.4 0.2 1.6 1 0 0 1 1 1 0 PhoH-like protein Parvo_NS1 PF01057.17 CCF75413.1 - 0.035 13.2 0.0 0.07 12.2 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_18 PF13238.6 CCF75413.1 - 0.039 14.5 0.1 0.15 12.6 0.0 2.0 2 0 0 2 2 1 0 AAA domain PIF1 PF05970.14 CCF75413.1 - 0.06 12.5 0.1 0.53 9.4 0.0 2.1 2 0 0 2 2 2 0 PIF1-like helicase Rad17 PF03215.15 CCF75413.1 - 0.073 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain Zeta_toxin PF06414.12 CCF75413.1 - 0.088 12.1 0.1 0.18 11.1 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin T2SSE PF00437.20 CCF75413.1 - 0.091 11.8 0.0 0.22 10.6 0.0 1.7 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_19 PF13245.6 CCF75413.1 - 0.11 12.8 1.1 0.33 11.3 1.1 2.0 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 CCF75413.1 - 0.11 12.3 0.0 0.3 11.0 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase ResIII PF04851.15 CCF75413.1 - 0.12 12.4 0.2 0.31 11.0 0.1 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_17 PF13207.6 CCF75413.1 - 0.13 12.6 0.0 0.25 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain Peptidase_C2 PF00648.21 CCF75414.1 - 4.1e-39 134.4 0.1 6.7e-39 133.7 0.1 1.3 1 0 0 1 1 1 1 Calpain family cysteine protease MFS_1 PF07690.16 CCF75415.1 - 4.7e-07 29.1 39.7 2.7e-06 26.5 39.3 2.4 1 1 0 1 1 1 1 Major Facilitator Superfamily WD40 PF00400.32 CCF75416.1 - 4.7e-38 128.5 30.4 8.1e-08 32.8 2.5 8.0 8 0 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75416.1 - 0.00044 20.5 1.9 6.3 7.2 0.1 3.9 1 1 3 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 CCF75416.1 - 0.00049 18.9 1.5 0.13 10.9 0.0 3.4 1 1 1 4 4 4 2 Nucleoporin Nup120/160 WD40_like PF17005.5 CCF75416.1 - 0.026 13.9 0.0 2.1 7.6 0.0 2.9 2 1 1 3 3 3 0 WD40-like domain PI3_PI4_kinase PF00454.27 CCF75417.1 - 0.043 13.6 0.0 2 8.2 0.0 2.3 2 0 0 2 2 2 0 Phosphatidylinositol 3- and 4-kinase Rab5ip PF07019.12 CCF75419.1 - 4.1e-08 33.7 1.5 4.1e-08 33.7 1.5 2.0 2 0 0 2 2 2 1 Rab5-interacting protein (Rab5ip) KH_1 PF00013.29 CCF75420.1 - 1.2e-08 34.7 0.2 1.8e-06 27.7 0.1 2.4 2 0 0 2 2 2 2 KH domain HCNGP PF07818.13 CCF75421.1 - 3.1e-05 24.5 0.0 4.1e-05 24.1 0.0 1.1 1 0 0 1 1 1 1 HCNGP-like protein DUF1682 PF07946.14 CCF75422.1 - 4.3e-29 101.8 2.0 5.7e-29 101.4 2.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1682) Binary_toxB_3 PF17476.2 CCF75422.1 - 0.0047 17.1 0.3 0.0047 17.1 0.3 2.2 2 1 1 3 3 3 1 Clostridial binary toxin B/anthrax toxin PA domain 3 zf-rbx1 PF12678.7 CCF75423.1 - 1e-22 80.2 19.0 3.7e-22 78.4 19.0 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 CCF75423.1 - 6.3e-16 58.2 16.2 6.3e-16 58.2 16.2 2.2 2 1 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 CCF75423.1 - 0.00029 20.6 5.3 0.00029 20.6 5.3 2.7 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 CCF75423.1 - 0.00047 20.4 23.3 0.0025 18.1 19.3 2.8 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 CCF75423.1 - 0.69 9.8 21.0 0.69 9.8 15.6 3.1 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 CCF75423.1 - 2.4 7.8 18.2 0.27 10.9 7.9 2.5 1 1 1 2 2 2 0 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 CCF75423.1 - 2.5 8.2 11.9 14 5.8 11.9 2.3 1 1 0 1 1 1 0 RING-type zinc-finger zf-RING_11 PF17123.5 CCF75423.1 - 5.7 6.8 18.3 0.26 11.1 6.4 2.8 2 0 0 2 2 2 0 RING-like zinc finger zf-RING_5 PF14634.6 CCF75423.1 - 9.8 6.2 17.1 1.8e+02 2.2 17.1 2.9 1 1 0 1 1 1 0 zinc-RING finger domain WD40 PF00400.32 CCF75424.1 - 4e-07 30.6 6.4 6.9e-06 26.7 0.1 4.9 6 0 0 6 6 6 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75424.1 - 3.4e-05 24.0 0.0 2.5 8.5 0.0 3.7 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain MMS1_N PF10433.9 CCF75424.1 - 0.0023 16.6 4.0 0.091 11.4 0.7 2.1 1 1 0 2 2 2 2 Mono-functional DNA-alkylating methyl methanesulfonate N-term Utp8 PF10395.9 CCF75424.1 - 0.063 11.8 0.0 0.097 11.2 0.0 1.3 1 1 0 1 1 1 0 Utp8 family RAP PF08373.10 CCF75425.1 - 2.5e-05 24.3 0.1 8.5e-05 22.6 0.1 1.9 1 0 0 1 1 1 1 RAP domain EF-hand_7 PF13499.6 CCF75425.1 - 0.032 14.7 0.1 0.096 13.2 0.1 1.8 1 0 0 1 1 1 0 EF-hand domain pair TIM PF00121.18 CCF75426.1 - 1.1e-34 119.9 0.1 1.9e-23 83.1 0.0 2.0 1 1 1 2 2 2 2 Triosephosphate isomerase CENP-T_C PF15511.6 CCF75427.1 - 6.1e-09 36.0 0.1 7.3e-09 35.7 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 CCF75427.1 - 0.00039 20.7 0.1 0.00052 20.4 0.1 1.3 1 1 0 1 1 1 1 CENP-S protein TAF PF02969.17 CCF75427.1 - 0.00075 19.6 0.0 0.001 19.2 0.0 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 CCF75427.1 - 0.00086 19.5 0.0 0.0012 19.0 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 CCF75427.1 - 0.0041 17.5 0.1 0.0045 17.3 0.1 1.3 1 1 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID-31kDa PF02291.15 CCF75427.1 - 0.026 14.6 0.0 0.03 14.4 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit Bromo_TP PF07524.13 CCF75427.1 - 0.074 13.1 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated TAFII28 PF04719.14 CCF75427.1 - 0.1 12.7 0.0 0.12 12.4 0.0 1.2 1 0 0 1 1 1 0 hTAFII28-like protein conserved region Pkinase PF00069.25 CCF75428.1 - 3.7e-48 164.2 0.4 2.1e-47 161.7 0.0 2.0 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75428.1 - 1.8e-19 70.1 0.6 1.2e-18 67.3 0.0 2.1 2 0 0 2 2 2 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 CCF75428.1 - 3.7e-07 29.3 0.0 3.7e-07 29.3 0.0 2.8 3 1 1 4 4 4 1 Fungal protein kinase Kdo PF06293.14 CCF75428.1 - 0.00019 20.8 0.0 0.00042 19.7 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF75428.1 - 0.021 14.8 0.0 0.12 12.3 0.0 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family Chloroa_b-bind PF00504.21 CCF75428.1 - 0.022 15.3 0.0 0.067 13.7 0.0 1.8 1 0 0 1 1 1 0 Chlorophyll A-B binding protein STAT6_C PF14596.6 CCF75428.1 - 0.15 12.0 3.2 21 5.1 0.6 3.2 2 1 1 3 3 3 0 STAT6 C-terminal EF-hand_7 PF13499.6 CCF75429.1 - 3.1e-11 43.5 1.4 1.7e-06 28.4 0.3 2.4 1 1 1 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 CCF75429.1 - 2.4e-10 39.2 2.1 0.00013 21.2 0.1 3.8 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 CCF75429.1 - 2.7e-09 36.2 0.9 0.00053 19.7 0.0 3.9 3 1 1 4 4 4 2 EF-hand domain EF-hand_8 PF13833.6 CCF75429.1 - 2.6e-08 33.6 1.9 0.00021 21.1 0.2 3.5 2 1 1 3 3 3 3 EF-hand domain pair Ribosomal_S4e PF00900.20 CCF75430.1 - 1.6e-31 108.0 0.1 1e-30 105.4 0.0 2.3 3 0 0 3 3 3 1 Ribosomal family S4e 40S_S4_C PF16121.5 CCF75430.1 - 2.7e-22 78.2 0.1 4.4e-22 77.5 0.1 1.4 1 0 0 1 1 1 1 40S ribosomal protein S4 C-terminus RS4NT PF08071.12 CCF75430.1 - 3.1e-17 62.4 5.1 5.6e-17 61.6 5.1 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4 PF01479.25 CCF75430.1 - 0.00057 19.5 0.0 0.0013 18.4 0.0 1.7 1 0 0 1 1 1 1 S4 domain KOW PF00467.29 CCF75430.1 - 0.00061 19.7 2.0 0.0012 18.7 0.4 2.5 2 0 0 2 2 2 1 KOW motif EF-hand_1 PF00036.32 CCF75431.1 - 2.4e-23 79.9 22.0 1.3e-05 24.3 0.6 5.9 6 0 0 6 6 6 5 EF hand EF-hand_6 PF13405.6 CCF75431.1 - 5.1e-22 75.9 19.7 0.00011 21.9 0.3 5.8 6 0 0 6 6 5 5 EF-hand domain EF-hand_7 PF13499.6 CCF75431.1 - 9.7e-22 77.2 16.6 1e-10 41.9 1.1 3.6 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 CCF75431.1 - 1.5e-21 74.9 19.4 0.00045 19.6 0.0 5.9 6 0 0 6 6 6 5 EF hand EF-hand_8 PF13833.6 CCF75431.1 - 1.7e-15 56.6 15.1 0.00042 20.1 0.1 5.5 4 1 1 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 CCF75431.1 - 9.3e-10 38.8 5.6 0.00029 21.1 0.1 3.3 2 1 1 3 3 3 3 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_10 PF14788.6 CCF75431.1 - 8.8e-05 22.3 8.4 0.18 11.7 0.1 4.1 4 1 0 4 4 4 2 EF hand Dockerin_1 PF00404.18 CCF75431.1 - 0.0082 16.3 4.4 6.4 7.1 0.2 4.3 3 1 1 4 4 4 1 Dockerin type I domain Pam16 PF03656.13 CCF75431.1 - 0.056 13.4 0.9 0.26 11.3 0.2 2.2 1 1 1 2 2 2 0 Pam16 EF-hand_4 PF12763.7 CCF75431.1 - 0.088 12.8 13.6 0.67 9.9 0.2 4.4 2 1 2 5 5 5 0 Cytoskeletal-regulatory complex EF hand Sua5_yciO_yrdC PF01300.18 CCF75431.1 - 0.19 11.2 0.0 0.45 10.0 0.0 1.6 1 1 1 2 2 2 0 Telomere recombination ABC_ATPase PF09818.9 CCF75432.1 - 7.2e-154 512.9 0.0 1.2e-153 512.2 0.0 1.2 1 0 0 1 1 1 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 CCF75432.1 - 1.8e-06 28.6 0.1 7e-06 26.7 0.1 1.9 1 1 0 1 1 1 1 AAA domain Helicase_C PF00271.31 CCF75433.1 - 3e-18 66.2 0.0 1.4e-17 64.0 0.0 2.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 CCF75433.1 - 1.8e-14 53.9 0.0 1.2e-09 38.2 0.0 2.5 2 0 0 2 2 2 2 DEAD/DEAH box helicase ResIII PF04851.15 CCF75433.1 - 0.0035 17.3 1.1 5.4 7.0 0.0 3.8 5 0 0 5 5 5 2 Type III restriction enzyme, res subunit AAA_12 PF13087.6 CCF75434.1 - 1.6e-49 168.2 2.0 2.4e-49 167.7 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 CCF75434.1 - 6.2e-41 140.9 0.1 1.9e-19 70.5 0.0 3.0 2 1 1 3 3 3 2 AAA domain AAA_30 PF13604.6 CCF75434.1 - 7.1e-14 52.0 0.0 2.7e-12 46.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain zf-AN1 PF01428.16 CCF75434.1 - 1.9e-09 37.5 5.2 4.3e-09 36.4 5.2 1.6 1 0 0 1 1 1 1 AN1-like Zinc finger AAA_19 PF13245.6 CCF75434.1 - 1e-08 35.6 0.0 4.3e-08 33.6 0.0 2.0 2 0 0 2 2 2 1 AAA domain ResIII PF04851.15 CCF75434.1 - 1.9e-08 34.5 3.1 1.1e-05 25.5 0.1 3.0 2 1 0 2 2 2 2 Type III restriction enzyme, res subunit AAA_22 PF13401.6 CCF75434.1 - 7e-06 26.4 0.1 3e-05 24.3 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 CCF75434.1 - 8.8e-05 22.3 0.3 0.0005 19.8 0.3 2.1 1 1 0 1 1 1 1 AAA domain PIF1 PF05970.14 CCF75434.1 - 0.00013 21.3 0.0 0.12 11.5 0.0 2.5 2 0 0 2 2 2 2 PIF1-like helicase AAA PF00004.29 CCF75434.1 - 0.00052 20.4 0.1 0.0048 17.3 0.2 2.6 2 1 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) T2SSE PF00437.20 CCF75434.1 - 0.0015 17.6 0.0 0.0027 16.8 0.0 1.3 1 0 0 1 1 1 1 Type II/IV secretion system protein SRP54 PF00448.22 CCF75434.1 - 0.012 15.2 0.0 0.25 11.0 0.0 2.3 1 1 0 2 2 2 0 SRP54-type protein, GTPase domain DEAD PF00270.29 CCF75434.1 - 0.017 14.9 0.1 0.11 12.3 0.1 2.2 1 1 0 1 1 1 0 DEAD/DEAH box helicase AAA_5 PF07728.14 CCF75434.1 - 0.018 15.1 0.0 0.072 13.1 0.0 2.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA_helicase PF00910.22 CCF75434.1 - 0.025 14.9 0.0 0.38 11.2 0.0 3.0 3 0 0 3 3 2 0 RNA helicase AAA_25 PF13481.6 CCF75434.1 - 0.049 13.2 0.0 0.089 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 CCF75434.1 - 0.059 12.6 3.7 0.31 10.3 0.2 3.1 2 1 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_16 PF13191.6 CCF75434.1 - 0.087 13.2 0.0 0.17 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain SWI2_SNF2 PF18766.1 CCF75434.1 - 0.09 12.4 0.4 1.5 8.4 0.1 2.5 2 0 0 2 2 2 0 SWI2/SNF2 ATPase AAA_28 PF13521.6 CCF75434.1 - 0.097 12.9 0.1 0.19 12.0 0.1 1.5 1 0 0 1 1 1 0 AAA domain Helicase_RecD PF05127.14 CCF75434.1 - 0.14 12.0 0.0 0.72 9.7 0.0 2.2 1 1 0 1 1 1 0 Helicase IstB_IS21 PF01695.17 CCF75434.1 - 0.16 11.6 0.0 2.4 7.9 0.0 2.5 3 0 0 3 3 2 0 IstB-like ATP binding protein AAA_18 PF13238.6 CCF75434.1 - 1.3 9.6 6.1 0.59 10.7 0.3 3.3 3 1 0 3 3 2 0 AAA domain Ribosomal_S15 PF00312.22 CCF75437.1 - 1.1e-22 80.0 2.1 2.2e-22 79.0 1.5 1.9 2 0 0 2 2 2 1 Ribosomal protein S15 Gpi16 PF04113.14 CCF75438.1 - 6.8e-14 51.2 0.0 1.3e-10 40.4 0.0 3.0 2 1 0 2 2 2 2 Gpi16 subunit, GPI transamidase component DUF2682 PF10909.8 CCF75438.1 - 1 9.9 4.1 0.75 10.3 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2682) RNA_pol_Rpb1_5 PF04998.17 CCF75439.1 - 8.8e-86 287.6 0.0 1.4e-85 286.9 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 CCF75439.1 - 2e-81 273.8 4.0 3e-81 273.2 4.0 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 CCF75439.1 - 4.5e-70 235.2 0.0 7.8e-70 234.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 CCF75439.1 - 2e-36 125.3 0.0 7.6e-36 123.4 0.0 2.1 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 CCF75439.1 - 7.2e-31 106.3 0.1 1.7e-30 105.1 0.1 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 HSP90 PF00183.18 CCF75441.1 - 4.8e-145 484.4 2.6 6.9e-145 483.9 2.6 1.2 1 0 0 1 1 1 1 Hsp90 protein HATPase_c_3 PF13589.6 CCF75441.1 - 1.2e-07 31.6 0.2 4.3e-07 29.8 0.2 1.9 1 1 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 CCF75441.1 - 5.3e-07 30.1 0.2 1.3e-06 28.9 0.2 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3887 PF13026.6 CCF75441.1 - 0.015 16.1 0.2 0.082 13.7 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3887) Pkinase PF00069.25 CCF75442.1 - 9.3e-37 126.8 0.1 3.4e-21 75.8 0.0 2.7 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75442.1 - 3.2e-13 49.6 0.6 1.4e-05 24.5 0.0 3.7 2 2 0 2 2 2 2 Protein tyrosine kinase GATA PF00320.27 CCF75443.1 - 3.3e-05 23.4 3.4 6.5e-05 22.5 3.4 1.5 1 0 0 1 1 1 1 GATA zinc finger TniQ PF06527.11 CCF75443.1 - 0.05 14.3 0.6 0.12 13.1 0.6 1.6 1 0 0 1 1 1 0 TniQ PHD20L1_u1 PF16660.5 CCF75443.1 - 0.11 13.2 0.3 0.11 13.2 0.3 2.1 2 0 0 2 2 2 0 PHD finger protein 20-like protein 1 FTP PF07504.13 CCF75443.1 - 1.2 9.0 6.5 0.2 11.5 1.1 2.5 2 0 0 2 2 2 0 Fungalysin/Thermolysin Propeptide Motif OTU PF02338.19 CCF75444.1 - 0.0052 17.3 0.3 0.84 10.1 0.0 3.9 3 2 0 3 3 3 1 OTU-like cysteine protease PIG-P PF08510.12 CCF75445.1 - 1.2e-14 54.3 4.0 1.4e-14 54.0 4.0 1.1 1 0 0 1 1 1 1 PIG-P Spore_YabQ PF09578.10 CCF75445.1 - 0.54 10.5 8.4 8.6 6.7 8.4 2.1 1 1 0 1 1 1 0 Spore cortex protein YabQ (Spore_YabQ) Sec1 PF00995.23 CCF75446.1 - 5.3e-60 204.3 16.4 6.7e-60 203.9 16.4 1.1 1 0 0 1 1 1 1 Sec1 family DUF1722 PF08349.11 CCF75446.1 - 0.073 13.4 7.0 0.23 11.8 3.9 2.5 1 1 0 2 2 2 0 Protein of unknown function (DUF1722) MRP-S23 PF10484.9 CCF75446.1 - 3.1 8.0 5.3 1.1 9.6 0.7 2.6 2 1 1 3 3 3 0 Mitochondrial ribosomal protein S23 D123 PF07065.14 CCF75448.1 - 4.9e-15 55.5 0.2 8.4e-14 51.4 0.2 2.2 1 1 0 1 1 1 1 D123 Fe-S_biosyn PF01521.20 CCF75449.1 - 3.6e-09 36.8 0.3 6.5e-09 36.0 0.0 1.5 2 0 0 2 2 2 1 Iron-sulphur cluster biosynthesis Mito_carr PF00153.27 CCF75451.1 - 1.4e-18 66.6 0.7 2.7e-08 33.6 0.1 3.5 1 1 3 4 4 4 3 Mitochondrial carrier protein PAP2_C PF14360.6 CCF75453.1 - 4.8e-15 55.8 13.8 4.8e-15 55.8 13.8 2.4 2 0 0 2 2 1 1 PAP2 superfamily C-terminal AAA PF00004.29 CCF75453.1 - 2e-11 44.5 0.0 5.6e-11 43.0 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 CCF75453.1 - 7.3e-09 35.8 0.4 1.9e-07 31.2 0.0 2.7 2 0 0 2 2 2 1 Rad17 P-loop domain PAP2_3 PF14378.6 CCF75453.1 - 1.1e-06 28.5 6.4 2.3e-06 27.4 6.4 1.6 1 0 0 1 1 1 1 PAP2 superfamily AAA_5 PF07728.14 CCF75453.1 - 1.2e-06 28.5 0.0 2.9e-06 27.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) PAP2 PF01569.21 CCF75453.1 - 2.9e-05 23.9 5.0 6.9e-05 22.6 5.0 1.6 1 0 0 1 1 1 1 PAP2 superfamily AAA_16 PF13191.6 CCF75453.1 - 3.7e-05 24.2 0.0 0.00026 21.4 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.12 CCF75453.1 - 9.5e-05 21.8 0.0 0.00019 20.8 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_14 PF13173.6 CCF75453.1 - 0.00047 20.2 0.0 0.0014 18.6 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CCF75453.1 - 0.00049 20.4 0.0 0.0012 19.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 CCF75453.1 - 0.00069 19.6 0.0 0.0021 18.0 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase AAA_18 PF13238.6 CCF75453.1 - 0.0012 19.4 0.0 0.0044 17.6 0.0 2.0 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 CCF75453.1 - 0.0035 17.1 0.0 0.0076 16.0 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 CCF75453.1 - 0.015 15.5 0.0 0.045 13.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 CCF75453.1 - 0.022 15.2 0.0 0.068 13.7 0.0 1.8 1 0 0 1 1 1 0 ABC transporter NTPase_1 PF03266.15 CCF75453.1 - 0.034 14.1 0.0 0.071 13.0 0.0 1.5 1 0 0 1 1 1 0 NTPase RNA_helicase PF00910.22 CCF75453.1 - 0.056 13.8 0.1 1.1 9.7 0.0 3.1 3 0 0 3 3 2 0 RNA helicase NB-ARC PF00931.22 CCF75453.1 - 0.071 12.3 0.0 0.16 11.1 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_17 PF13207.6 CCF75453.1 - 0.13 12.7 0.0 0.29 11.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain Mito_carr PF00153.27 CCF75454.1 - 1.4e-08 34.5 0.0 6.9e-05 22.7 0.0 2.4 2 0 0 2 2 2 2 Mitochondrial carrier protein PA14 PF07691.12 CCF75455.1 - 1.1e-11 44.8 0.0 3.4e-11 43.2 0.0 1.9 1 0 0 1 1 1 1 PA14 domain GLEYA PF10528.9 CCF75455.1 - 0.00092 19.6 0.2 0.12 12.9 0.0 3.2 2 0 0 2 2 2 1 GLEYA domain FapA PF03961.13 CCF75455.1 - 1.7 7.1 5.6 3 6.3 5.6 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A NUDIX_2 PF13869.6 CCF75456.1 - 4.6e-40 137.2 0.0 6.3e-40 136.8 0.0 1.1 1 0 0 1 1 1 1 Nucleotide hydrolase Acetyltransf_1 PF00583.25 CCF75458.1 - 4.2e-14 52.8 0.1 5.4e-14 52.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CCF75458.1 - 2e-11 43.9 0.1 2.4e-11 43.7 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CCF75458.1 - 4.8e-07 30.1 0.2 6e-07 29.8 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 CCF75458.1 - 1.6e-05 24.8 0.0 2.5e-05 24.2 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 CCF75458.1 - 0.056 13.5 0.0 0.08 13.0 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 CCF75458.1 - 0.067 13.3 0.4 0.088 12.9 0.4 1.1 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_13 PF13880.6 CCF75458.1 - 0.15 12.1 0.0 0.24 11.4 0.0 1.3 1 0 0 1 1 1 0 ESCO1/2 acetyl-transferase TBCA PF02970.16 CCF75459.1 - 2.3e-13 50.3 1.4 3.6e-13 49.7 1.1 1.5 1 1 0 1 1 1 1 Tubulin binding cofactor A Phage_GP20 PF06810.11 CCF75459.1 - 0.00033 20.5 1.7 0.026 14.3 0.3 2.1 1 1 1 2 2 2 2 Phage minor structural protein GP20 DMAP1_like PF17024.5 CCF75459.1 - 0.03 14.5 0.8 0.03 14.5 0.8 1.6 2 0 0 2 2 2 0 Putative DMAP1-like tRNA-synt_2d PF01409.20 CCF75461.1 - 1.1e-70 237.9 0.0 4.9e-48 163.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) PheRS_DBD3 PF18553.1 CCF75461.1 - 2.6e-05 24.4 0.2 0.00021 21.5 0.0 2.3 2 0 0 2 2 2 1 PheRS DNA binding domain 3 tRNA-synt_2 PF00152.20 CCF75461.1 - 0.00025 20.2 0.1 0.0061 15.7 0.0 2.5 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) tRNA_synthFbeta PF17759.1 CCF75461.1 - 0.031 13.7 0.1 0.089 12.2 0.0 1.7 2 0 0 2 2 2 0 Phenylalanyl tRNA synthetase beta chain CLM domain PheRS_DBD2 PF18554.1 CCF75461.1 - 0.082 12.9 0.4 0.19 11.8 0.4 1.7 1 0 0 1 1 1 0 PheRS DNA binding domain 2 Mre11_DNA_bind PF04152.14 CCF75462.1 - 1.7e-29 103.3 0.1 4e-29 102.1 0.1 1.7 1 0 0 1 1 1 1 Mre11 DNA-binding presumed domain Metallophos PF00149.28 CCF75462.1 - 2.3e-12 47.8 2.9 5.1e-12 46.7 2.9 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 CCF75462.1 - 0.00071 19.8 0.0 0.022 15.0 0.0 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Iso_dh PF00180.20 CCF75463.1 - 4.4e-62 210.2 0.0 5.1e-62 210.0 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase FAST_1 PF06743.15 CCF75464.1 - 0.054 13.4 3.6 5.4 7.0 0.0 4.6 3 2 1 4 4 4 0 FAST kinase-like protein, subdomain 1 Proteasome PF00227.26 CCF75465.1 - 1.7e-30 105.9 0.0 1.9e-30 105.8 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit Raf1_HTH PF18579.1 CCF75465.1 - 0.16 11.6 0.0 0.33 10.7 0.0 1.4 1 0 0 1 1 1 0 Rubisco accumulation factor 1 helix turn helix domain DNA_pol_A PF00476.20 CCF75466.1 - 5.9e-81 272.4 1.0 1.1e-80 271.6 1.0 1.3 1 0 0 1 1 1 1 DNA polymerase family A DUF4140 PF13600.6 CCF75467.1 - 0.14 12.6 0.7 2.2 8.7 0.7 2.5 1 1 0 1 1 1 0 N-terminal domain of unknown function (DUF4140) Tmemb_14 PF03647.13 CCF75468.1 - 2.9e-05 24.7 9.2 3.7e-05 24.4 9.2 1.1 1 0 0 1 1 1 1 Transmembrane proteins 14C DUF751 PF05421.11 CCF75468.1 - 0.034 14.8 2.3 0.034 14.8 2.3 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF751) FixS PF03597.15 CCF75468.1 - 0.3 10.8 2.1 9.5 6.0 0.3 2.7 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type DUF2953 PF11167.8 CCF75468.1 - 0.48 10.5 0.2 0.48 10.5 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF2953) Tmemb_170 PF10190.9 CCF75468.1 - 1 9.7 11.1 0.8 10.1 7.7 2.2 1 1 1 2 2 2 0 Putative transmembrane protein 170 BCLP PF12304.8 CCF75468.1 - 2.7 7.5 7.8 5.6 6.5 3.2 2.1 1 1 0 2 2 2 0 Beta-casein like protein DUF2207 PF09972.9 CCF75468.1 - 8.1 5.1 7.4 9.1 4.9 7.4 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) PIG-L PF02585.17 CCF75469.1 - 4.3e-05 24.1 0.0 8.8e-05 23.1 0.0 1.6 1 1 0 1 1 1 1 GlcNAc-PI de-N-acetylase SNF2_N PF00176.23 CCF75470.1 - 1e-45 156.0 0.0 3.2e-45 154.4 0.0 1.8 1 1 1 2 2 2 1 SNF2 family N-terminal domain PHD PF00628.29 CCF75470.1 - 5e-18 64.7 81.7 5e-10 39.1 6.5 7.6 7 0 0 7 7 7 4 PHD-finger Helicase_C PF00271.31 CCF75470.1 - 6.6e-16 58.6 0.3 2.3e-15 56.9 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF75470.1 - 1.2e-06 28.6 0.0 6.6e-06 26.2 0.0 2.4 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Prok-RING_1 PF14446.6 CCF75470.1 - 3.5e-05 23.6 4.7 3.5e-05 23.6 4.7 7.5 6 3 2 8 8 8 2 Prokaryotic RING finger family 1 DEAD PF00270.29 CCF75470.1 - 0.0003 20.6 0.0 0.00082 19.2 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase PHD_2 PF13831.6 CCF75470.1 - 0.00045 19.7 0.8 0.00045 19.7 0.8 7.1 8 0 0 8 8 8 3 PHD-finger C1_1 PF00130.22 CCF75470.1 - 0.0019 18.0 1.9 0.0019 18.0 1.9 8.4 7 3 1 8 8 8 2 Phorbol esters/diacylglycerol binding domain (C1 domain) APO_RNA-bind PF05634.11 CCF75470.1 - 0.018 14.4 1.2 0.2 11.0 0.3 3.0 3 0 0 3 3 3 0 APO RNA-binding AAA_14 PF13173.6 CCF75470.1 - 0.089 12.8 0.0 0.49 10.4 0.0 2.3 1 0 0 1 1 1 0 AAA domain PPR PF01535.20 CCF75471.1 - 5e-05 23.3 1.9 0.33 11.3 0.1 4.2 4 0 0 4 4 4 2 PPR repeat TPR_14 PF13428.6 CCF75471.1 - 0.067 14.0 0.0 1.6e+02 3.5 0.1 4.4 4 1 1 5 5 5 0 Tetratricopeptide repeat PPR_2 PF13041.6 CCF75471.1 - 0.074 13.3 0.4 5.9 7.2 0.1 3.0 2 0 0 2 2 2 0 PPR repeat family TPR_12 PF13424.6 CCF75471.1 - 0.074 13.3 4.3 1 9.7 0.1 3.5 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_19 PF14559.6 CCF75471.1 - 0.18 12.3 1.9 40 4.8 0.0 3.5 3 1 0 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF75471.1 - 1.2 9.5 12.3 4.3 7.6 1.2 3.8 3 1 0 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 Chorein_N PF12624.7 CCF75472.1 - 5.8e-22 78.0 1.2 1.7e-21 76.5 0.8 2.0 2 0 0 2 2 2 1 N-terminal region of Chorein or VPS13 VPS13_C PF16909.5 CCF75472.1 - 2.3e-20 73.1 0.1 5e-20 72.0 0.1 1.6 1 0 0 1 1 1 1 Vacuolar-sorting-associated 13 protein C-terminal SHR-BD PF06650.12 CCF75472.1 - 8.9e-08 31.8 0.0 1e-05 25.1 0.0 2.6 2 1 0 2 2 2 2 SHR-binding domain of vacuolar-sorting associated protein 13 GTP_EFTU PF00009.27 CCF75473.1 - 6e-20 71.6 0.0 1e-19 70.9 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 CCF75473.1 - 0.0011 19.0 0.0 0.0044 17.1 0.0 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_29 PF13555.6 CCF75473.1 - 0.0028 17.4 0.5 0.063 13.0 0.0 2.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain cobW PF02492.19 CCF75473.1 - 0.0093 15.6 0.1 0.2 11.2 0.0 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Septin PF00735.18 CCF75473.1 - 0.011 15.0 0.0 0.023 14.0 0.0 1.5 1 0 0 1 1 1 0 Septin RsgA_GTPase PF03193.16 CCF75473.1 - 0.019 14.9 0.2 2 8.3 0.1 2.5 2 0 0 2 2 2 0 RsgA GTPase SRPRB PF09439.10 CCF75473.1 - 0.1 12.1 0.3 1.1 8.7 0.3 2.5 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Nop52 PF05997.12 CCF75474.1 - 2.5e-35 122.3 0.0 4.2e-35 121.5 0.0 1.3 1 0 0 1 1 1 1 Nucleolar protein,Nop52 RICTOR_M PF14666.6 CCF75474.1 - 0.084 12.7 0.2 0.24 11.2 0.2 1.8 1 0 0 1 1 1 0 Rapamycin-insensitive companion of mTOR, middle domain NifU PF01106.17 CCF75475.1 - 2.6e-24 85.2 0.1 3.4e-24 84.8 0.1 1.2 1 0 0 1 1 1 1 NifU-like domain DUF2600 PF10776.9 CCF75475.1 - 0.0038 16.1 0.0 0.004 16.1 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF2600) Ank_2 PF12796.7 CCF75476.1 - 2.6e-41 140.1 20.5 6.6e-13 49.1 0.0 5.4 2 1 2 5 5 5 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 CCF75476.1 - 2.2e-28 98.3 9.5 3.3e-09 37.1 0.3 7.5 3 2 3 7 7 7 6 Ankyrin repeats (many copies) Ank PF00023.30 CCF75476.1 - 3.3e-24 84.2 10.2 0.0011 19.3 0.0 8.4 9 0 0 9 9 9 5 Ankyrin repeat Ank_3 PF13606.6 CCF75476.1 - 2.7e-22 76.4 10.2 0.00017 21.7 0.0 9.6 10 0 0 10 10 10 5 Ankyrin repeat Ank_5 PF13857.6 CCF75476.1 - 2.2e-20 72.4 3.6 0.0006 20.1 0.2 7.7 2 2 6 8 8 8 5 Ankyrin repeats (many copies) Kelch_4 PF13418.6 CCF75477.1 - 4.4e-37 125.9 14.6 1.6e-09 37.6 0.1 6.4 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_3 PF13415.6 CCF75477.1 - 7.5e-29 99.4 6.2 6.7e-07 29.4 0.1 7.0 7 0 0 7 7 7 6 Galactose oxidase, central domain Kelch_5 PF13854.6 CCF75477.1 - 2e-18 66.0 10.3 0.00044 20.2 0.3 6.8 6 1 0 6 6 6 5 Kelch motif Kelch_6 PF13964.6 CCF75477.1 - 6.5e-15 54.8 18.0 1.4e-06 28.4 0.2 6.3 4 1 2 6 6 6 3 Kelch motif Kelch_2 PF07646.15 CCF75477.1 - 1.4e-14 53.4 7.6 0.0032 17.4 0.3 6.8 6 0 0 6 6 6 5 Kelch motif Kelch_1 PF01344.25 CCF75477.1 - 1.3e-13 50.2 16.2 8.7e-06 25.2 0.2 6.5 7 0 0 7 7 7 3 Kelch motif DUF4110 PF13422.6 CCF75477.1 - 6.6e-06 26.1 0.7 1.4e-05 25.0 0.7 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4110) PK PF00224.21 CCF75478.1 - 5.7e-141 469.4 11.0 8.8e-141 468.8 11.0 1.2 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 CCF75478.1 - 3.1e-24 85.5 3.7 4.5e-24 84.9 1.0 2.4 2 1 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 CCF75478.1 - 0.0037 16.4 0.3 0.0072 15.5 0.3 1.5 1 0 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family Intein_splicing PF14890.6 CCF75478.1 - 0.019 14.9 1.8 0.043 13.8 0.2 2.4 2 2 0 2 2 2 0 Intein splicing domain DUF2345 PF10106.9 CCF75478.1 - 0.083 12.8 0.2 0.18 11.7 0.2 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2345) Alliinase_C PF04864.13 CCF75479.1 - 0.043 12.7 0.2 0.13 11.1 0.0 1.7 2 0 0 2 2 2 0 Allinase adh_short PF00106.25 CCF75480.1 - 5.7e-28 97.7 0.4 9.3e-28 97.0 0.1 1.5 2 0 0 2 2 2 1 short chain dehydrogenase adh_short_C2 PF13561.6 CCF75480.1 - 5.8e-17 62.0 0.0 8.6e-17 61.5 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 CCF75480.1 - 3e-07 30.5 0.0 4.9e-07 29.8 0.0 1.2 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 CCF75480.1 - 0.011 15.2 0.2 0.032 13.7 0.2 1.6 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 CCF75480.1 - 0.059 12.8 0.1 0.1 12.0 0.1 1.5 1 1 0 1 1 1 0 GDP-mannose 4,6 dehydratase NAD_binding_2 PF03446.15 CCF75480.1 - 0.16 12.2 0.0 0.31 11.2 0.0 1.4 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase RNase_PH_C PF03725.15 CCF75481.1 - 0.00023 21.1 0.1 0.00042 20.3 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 AP2 PF00847.20 CCF75482.1 - 8.2e-08 32.4 2.9 1.6e-07 31.4 2.9 1.5 1 0 0 1 1 1 1 AP2 domain UCR_UQCRX_QCR9 PF05365.12 CCF75483.1 - 1.9e-11 43.7 0.1 3.6e-11 42.8 0.1 1.5 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like NapB PF03892.14 CCF75483.1 - 0.018 15.0 0.7 13 5.8 0.0 3.3 3 0 0 3 3 3 0 Nitrate reductase cytochrome c-type subunit (NapB) Axin_b-cat_bind PF08833.10 CCF75483.1 - 0.13 12.3 1.8 16 5.7 0.4 3.3 3 0 0 3 3 3 0 Axin beta-catenin binding domain FAST_1 PF06743.15 CCF75484.1 - 0.00033 20.5 12.5 0.0041 17.0 2.1 5.4 3 2 4 7 7 7 2 FAST kinase-like protein, subdomain 1 Death PF00531.22 CCF75484.1 - 0.095 12.9 0.0 19 5.5 0.0 2.8 2 0 0 2 2 2 0 Death domain DUF647 PF04884.14 CCF75485.1 - 6.7e-27 94.7 3.3 6.7e-27 94.7 3.3 1.6 2 0 0 2 2 2 1 Vitamin B6 photo-protection and homoeostasis tRNA-synt_1 PF00133.22 CCF75486.1 - 1.7e-37 129.0 0.0 3.8e-22 78.3 0.0 3.9 1 1 1 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 CCF75486.1 - 2.4e-17 62.8 0.4 5.7e-09 35.2 0.0 2.8 3 0 0 3 3 3 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 CCF75486.1 - 1.3e-13 51.2 1.9 1.3e-13 51.2 1.9 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 CCF75486.1 - 9.9e-11 41.5 0.0 9.9e-11 41.5 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain HEAT PF02985.22 CCF75488.1 - 0.028 14.6 0.1 26 5.4 0.0 4.2 4 0 0 4 4 4 0 HEAT repeat FAST_1 PF06743.15 CCF75490.1 - 9.9e-05 22.2 5.5 0.0024 17.8 0.6 4.4 4 1 1 5 5 5 2 FAST kinase-like protein, subdomain 1 FKS1_dom1 PF14288.6 CCF75490.1 - 0.045 14.1 0.7 1.8 8.9 0.0 3.2 2 0 0 2 2 2 0 1,3-beta-glucan synthase subunit FKS1, domain-1 Methyltrans_RNA PF04452.14 CCF75491.1 - 6.8e-25 87.7 0.0 3.2e-24 85.5 0.0 1.8 1 1 0 1 1 1 1 RNA methyltransferase NAC PF01849.18 CCF75494.1 - 2.9e-20 72.0 0.6 6.6e-20 70.8 0.6 1.6 1 0 0 1 1 1 1 NAC domain HOIP-UBA PF16678.5 CCF75494.1 - 0.0061 16.6 0.7 0.011 15.7 0.1 1.8 2 1 0 2 2 2 1 HOIP UBA domain pair SHS2_FTSA PF02491.20 CCF75494.1 - 0.039 14.4 0.7 0.084 13.3 0.7 1.6 1 0 0 1 1 1 0 SHS2 domain inserted in FTSA SRP68 PF16969.5 CCF75495.1 - 1.1e-26 94.0 7.4 2.9e-26 92.6 7.4 1.7 1 1 0 1 1 1 1 RNA-binding signal recognition particle 68 RAP PF08373.10 CCF75496.1 - 5.9e-23 80.7 0.0 1.5e-22 79.5 0.0 1.7 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 CCF75496.1 - 0.00042 20.4 0.0 0.0015 18.6 0.0 1.9 2 0 0 2 2 2 1 REase_MTES_1575 RRP36 PF06102.12 CCF75498.1 - 6.1e-23 81.6 14.6 7.2e-23 81.4 14.6 1.0 1 0 0 1 1 1 1 rRNA biogenesis protein RRP36 DDE_Tnp_IS1 PF03400.13 CCF75498.1 - 0.026 14.8 0.6 0.037 14.4 0.6 1.2 1 0 0 1 1 1 0 IS1 transposase NAD2 PF18782.1 CCF75498.1 - 0.032 14.3 0.2 0.047 13.8 0.2 1.3 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 XRN_M PF17846.1 CCF75498.1 - 0.67 8.8 7.6 0.86 8.5 7.6 1.1 1 0 0 1 1 1 0 Xrn1 helical domain D5_N PF08706.11 CCF75498.1 - 6.1 7.1 8.1 17 5.6 8.1 1.8 1 1 0 1 1 1 0 D5 N terminal like ABC_tran PF00005.27 CCF75499.1 - 1.2e-36 126.3 0.0 2.5e-18 66.9 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 CCF75499.1 - 1.8e-13 51.0 6.2 0.0088 15.9 0.7 4.4 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system RLI PF04068.15 CCF75499.1 - 3.6e-12 45.9 5.0 1.3e-11 44.1 5.0 2.0 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI SMC_N PF02463.19 CCF75499.1 - 1.1e-10 41.4 6.4 0.00042 19.8 0.0 3.7 2 2 0 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 CCF75499.1 - 2.7e-08 33.9 1.0 0.013 15.2 0.0 3.4 3 1 0 4 4 4 2 AAA ATPase domain Fer4 PF00037.27 CCF75499.1 - 2.6e-06 27.0 7.6 2.6e-06 27.0 7.6 2.8 3 0 0 3 3 3 1 4Fe-4S binding domain Fer4_6 PF12837.7 CCF75499.1 - 2.6e-06 27.3 13.3 5.5e-05 23.1 2.7 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain AAA_22 PF13401.6 CCF75499.1 - 4.2e-06 27.1 0.1 0.00084 19.6 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 CCF75499.1 - 1.6e-05 24.6 0.2 0.22 11.3 0.0 2.3 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 CCF75499.1 - 7.7e-05 23.3 0.0 0.028 14.9 0.0 2.4 2 0 0 2 2 2 1 AAA domain RsgA_GTPase PF03193.16 CCF75499.1 - 0.00026 20.9 0.0 0.39 10.6 0.0 2.8 3 0 0 3 3 2 1 RsgA GTPase AAA PF00004.29 CCF75499.1 - 0.0004 20.8 0.1 0.36 11.3 0.0 3.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 CCF75499.1 - 0.00047 20.6 0.0 0.28 11.5 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain Rad17 PF03215.15 CCF75499.1 - 0.00047 20.1 0.0 0.09 12.7 0.0 2.5 2 0 0 2 2 2 1 Rad17 P-loop domain AAA_24 PF13479.6 CCF75499.1 - 0.00076 19.3 0.1 0.19 11.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain SRP54 PF00448.22 CCF75499.1 - 0.00095 18.8 1.2 0.11 12.1 0.0 2.4 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_18 PF13238.6 CCF75499.1 - 0.0011 19.5 0.0 2.2 8.9 0.0 2.7 3 0 0 3 3 2 1 AAA domain NACHT PF05729.12 CCF75499.1 - 0.0021 18.0 0.3 0.22 11.4 0.0 2.4 2 0 0 2 2 2 1 NACHT domain Fer4_7 PF12838.7 CCF75499.1 - 0.0029 18.2 1.4 0.0029 18.2 1.4 2.4 1 1 2 3 3 3 2 4Fe-4S dicluster domain RNA_helicase PF00910.22 CCF75499.1 - 0.0031 17.9 1.3 2.3 8.6 0.0 3.4 3 1 0 3 3 2 1 RNA helicase Fer4_10 PF13237.6 CCF75499.1 - 0.0086 16.2 3.1 0.0086 16.2 3.1 2.5 1 1 1 2 2 2 1 4Fe-4S dicluster domain AAA_30 PF13604.6 CCF75499.1 - 0.0094 15.7 0.0 1.8 8.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain SbcCD_C PF13558.6 CCF75499.1 - 0.0096 16.1 0.0 5.9 7.2 0.0 3.2 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit Fer4_2 PF12797.7 CCF75499.1 - 0.015 15.4 4.0 0.015 15.4 4.0 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain AAA_5 PF07728.14 CCF75499.1 - 0.016 15.2 0.4 1.3 9.0 0.0 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) VirE PF05272.11 CCF75499.1 - 0.023 14.4 0.0 4.3 7.0 0.0 2.4 2 0 0 2 2 2 0 Virulence-associated protein E Mg_chelatase PF01078.21 CCF75499.1 - 0.027 13.9 0.0 0.73 9.2 0.0 2.4 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI AAA_33 PF13671.6 CCF75499.1 - 0.028 14.6 0.2 2 8.6 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 CCF75499.1 - 0.036 13.6 0.0 0.84 9.1 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region TsaE PF02367.17 CCF75499.1 - 0.039 14.0 0.1 0.34 10.9 0.0 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_28 PF13521.6 CCF75499.1 - 0.04 14.1 0.2 4.1 7.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain Fer4_9 PF13187.6 CCF75499.1 - 0.046 13.9 15.3 0.27 11.4 16.1 1.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 CCF75499.1 - 0.055 14.0 1.0 0.055 14.0 1.0 2.7 3 0 0 3 3 2 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 CCF75499.1 - 0.058 13.5 16.8 0.13 12.4 16.8 1.6 1 0 0 1 1 1 0 4Fe-4S dicluster domain G-alpha PF00503.20 CCF75499.1 - 0.058 12.5 0.0 2.4 7.2 0.0 2.2 2 0 0 2 2 2 0 G-protein alpha subunit MMR_HSR1 PF01926.23 CCF75499.1 - 0.091 12.8 0.1 9.7 6.3 0.0 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_14 PF13173.6 CCF75499.1 - 0.1 12.6 0.9 27 4.8 0.0 3.5 2 1 0 3 3 3 0 AAA domain NB-ARC PF00931.22 CCF75499.1 - 0.12 11.5 0.1 6.2 5.9 0.0 2.3 2 0 0 2 2 2 0 NB-ARC domain Fer4_16 PF13484.6 CCF75499.1 - 1.4 9.9 14.8 0.063 14.2 1.9 2.6 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain PduV-EutP PF10662.9 CCF75499.1 - 1.8 8.3 4.6 5.8 6.7 0.1 3.4 3 1 1 4 4 3 0 Ethanolamine utilisation - propanediol utilisation Fer4_4 PF12800.7 CCF75499.1 - 2.9 8.6 15.3 0.14 12.8 2.7 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Ribosomal_S10 PF00338.22 CCF75500.1 - 2.1e-13 50.3 0.3 5.2e-13 49.1 0.3 1.7 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Peptidase_M22 PF00814.25 CCF75501.1 - 7.8e-49 166.8 0.2 4.2e-48 164.4 0.0 2.0 2 0 0 2 2 2 1 Glycoprotease family Ribosomal_S11 PF00411.19 CCF75501.1 - 0.032 14.6 0.0 0.067 13.6 0.0 1.5 1 0 0 1 1 1 0 Ribosomal protein S11 RWD PF05773.22 CCF75502.1 - 5.3 7.4 7.3 1.1 9.5 0.4 3.1 2 2 0 2 2 2 0 RWD domain UPF0160 PF03690.13 CCF75503.1 - 9e-109 363.9 0.0 1e-108 363.8 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0160) PNRC PF15365.6 CCF75504.1 - 0.017 14.9 3.1 0.1 12.5 0.9 2.7 2 1 0 2 2 2 0 Proline-rich nuclear receptor coactivator motif RIO1 PF01163.22 CCF75505.1 - 1.5e-44 151.9 0.2 1.5e-44 151.9 0.2 1.6 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 CCF75505.1 - 3.2e-30 104.2 0.0 1.1e-29 102.4 0.0 2.0 2 0 0 2 2 2 1 Rio2, N-terminal APH PF01636.23 CCF75505.1 - 2.8e-06 27.5 0.4 0.00031 20.8 0.3 2.3 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 CCF75505.1 - 3.4e-05 23.3 0.1 0.00045 19.6 0.1 2.2 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Ribosomal_L21p PF00829.21 CCF75506.1 - 1.6e-15 57.2 0.1 3.4e-15 56.1 0.1 1.6 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein DnaJ PF00226.31 CCF75507.1 - 3.5e-06 27.1 0.1 1.1e-05 25.4 0.1 1.9 1 0 0 1 1 1 1 DnaJ domain CspB_prodomain PF18425.1 CCF75507.1 - 0.0079 16.2 0.1 0.028 14.4 0.0 2.0 3 0 0 3 3 3 1 Csp protease B prodomain Ribosomal_S7e PF01251.18 CCF75508.1 - 6.8e-67 224.8 4.8 7.6e-67 224.6 4.8 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e RsfS PF02410.15 CCF75509.1 - 2.4e-14 53.6 0.0 4.7e-14 52.6 0.0 1.5 1 0 0 1 1 1 1 Ribosomal silencing factor during starvation TFIIE-A_C PF11521.8 CCF75510.1 - 0.01 16.1 0.3 0.023 15.0 0.3 1.6 1 1 0 1 1 1 0 C-terminal general transcription factor TFIIE alpha Methyltransf_10 PF05971.12 CCF75511.1 - 3.6e-46 157.9 3.4 4.6e-44 150.9 1.2 3.5 2 1 1 3 3 3 1 RNA methyltransferase MTS PF05175.14 CCF75511.1 - 7.1e-05 22.4 0.0 0.00014 21.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 CCF75511.1 - 0.00038 19.9 0.1 0.00065 19.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 CCF75511.1 - 0.14 12.1 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain S10_plectin PF03501.15 CCF75512.1 - 2.2e-38 130.2 0.9 2.5e-38 130.0 0.9 1.0 1 0 0 1 1 1 1 Plectin/S10 domain KH_1 PF00013.29 CCF75513.1 - 2.9e-05 23.8 0.0 7.3e-05 22.5 0.0 1.7 1 0 0 1 1 1 1 KH domain ATP-synt_C PF00137.21 CCF75515.1 - 1.1e-25 89.7 28.2 1.4e-13 51.0 11.2 3.0 2 1 0 2 2 2 2 ATP synthase subunit C DUF2542 PF10808.8 CCF75515.1 - 2.8 8.5 5.8 3.3 8.2 0.3 3.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2542) FtsJ PF01728.19 CCF75516.1 - 3e-55 187.1 0.4 3.7e-54 183.5 0.0 2.6 3 0 0 3 3 3 1 FtsJ-like methyltransferase Spb1_C PF07780.12 CCF75516.1 - 1.9e-36 125.7 18.3 1.9e-36 125.7 18.3 3.6 3 1 1 4 4 4 1 Spb1 C-terminal domain DUF3381 PF11861.8 CCF75516.1 - 4.1e-31 108.0 3.6 4.1e-31 108.0 3.6 5.0 4 2 2 6 6 6 1 Domain of unknown function (DUF3381) zf-C3HC4_2 PF13923.6 CCF75517.1 - 1.2e-05 25.0 18.2 1.2e-05 25.0 18.2 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF75517.1 - 6.4e-05 22.7 17.0 6.4e-05 22.7 17.0 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 CCF75517.1 - 7.8e-05 22.5 22.7 0.00043 20.1 19.8 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_6 PF14835.6 CCF75517.1 - 0.00036 20.4 12.8 0.00036 20.4 12.8 1.7 2 0 0 2 2 2 1 zf-RING of BARD1-type protein zf-C3HC4_5 PF17121.5 CCF75517.1 - 0.0047 16.8 6.5 0.0047 16.8 6.5 2.1 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 CCF75517.1 - 0.0078 16.5 19.9 0.0078 16.5 19.9 2.5 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 CCF75517.1 - 6.9 6.7 29.0 0.27 11.2 20.4 2.4 2 0 0 2 2 2 0 zinc-RING finger domain Proteasome PF00227.26 CCF75518.1 - 5.1e-58 195.7 0.2 6e-58 195.5 0.2 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 CCF75518.1 - 5.8e-14 51.4 0.2 1.7e-13 49.9 0.0 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature SapB_1 PF05184.15 CCF75518.1 - 3.1 7.9 4.9 17 5.5 0.4 2.4 2 0 0 2 2 2 0 Saposin-like type B, region 1 Proteasome PF00227.26 CCF75519.1 - 3.7e-49 166.8 0.0 5.3e-49 166.3 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 CCF75519.1 - 8e-12 44.6 0.2 1.5e-11 43.8 0.2 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Romo1 PF10247.9 CCF75520.1 - 5.8e-16 58.6 11.7 7.5e-16 58.2 11.7 1.2 1 0 0 1 1 1 1 Reactive mitochondrial oxygen species modulator 1 ER_lumen_recept PF00810.18 CCF75522.1 - 2.9e-50 170.9 14.4 4e-50 170.5 14.4 1.2 1 0 0 1 1 1 1 ER lumen protein retaining receptor PQ-loop PF04193.14 CCF75522.1 - 0.011 15.5 0.5 0.011 15.5 0.5 4.3 4 1 1 5 5 5 0 PQ loop repeat Tfb4 PF03850.14 CCF75523.1 - 2.6e-23 82.9 4.8 3.3e-20 72.7 4.8 2.5 1 1 0 1 1 1 1 Transcription factor Tfb4 zf-RanBP PF00641.18 CCF75524.1 - 8.6e-08 31.4 4.0 2.8e-07 29.7 4.0 1.9 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others OCRE PF17780.1 CCF75524.1 - 0.00068 19.6 4.9 0.0012 18.8 3.5 2.3 2 0 0 2 2 2 1 OCRE domain DEAD PF00270.29 CCF75525.1 - 5.5e-46 156.5 0.0 2e-45 154.7 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF75525.1 - 4.2e-26 91.5 0.1 2.2e-25 89.1 0.0 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 CCF75525.1 - 2.4e-17 62.9 0.2 4.5e-17 62.0 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) ResIII PF04851.15 CCF75525.1 - 0.0076 16.3 0.0 0.02 14.9 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit P30 PF07390.11 CCF75525.1 - 0.06 13.4 0.2 0.19 11.8 0.2 1.8 1 1 0 1 1 1 0 Mycoplasma P30 protein Pkinase PF00069.25 CCF75526.1 - 1.2e-68 231.3 0.0 1.8e-68 230.8 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75526.1 - 1.6e-35 122.7 0.0 2.4e-35 122.1 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF75526.1 - 8.1e-06 25.4 0.0 1.5e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 CCF75526.1 - 0.00045 19.3 0.6 0.0025 16.8 0.6 2.1 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 CCF75526.1 - 0.0051 16.2 0.0 0.0086 15.5 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF75526.1 - 0.25 11.2 0.0 0.37 10.7 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family DUF1651 PF07864.11 CCF75527.1 - 0.0068 16.7 0.0 0.011 16.0 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1651) CPW_WPC PF09717.10 CCF75528.1 - 4.9e-13 49.8 10.2 6.3e-09 36.7 2.9 2.5 2 0 0 2 2 2 2 Plasmodium falciparum domain of unknown function (CPW_WPC) CelTOS PF18659.1 CCF75528.1 - 0.065 13.7 0.2 0.13 12.7 0.2 1.5 1 0 0 1 1 1 0 Cell-traversal protein for ookinetes and sporozoites DNA_pol_B_exo1 PF03104.19 CCF75530.1 - 1.9e-51 175.2 6.7 1.9e-51 175.2 6.7 1.9 2 0 0 2 2 2 1 DNA polymerase family B, exonuclease domain DUF1744 PF08490.12 CCF75530.1 - 2.8e-13 49.2 2.9 3.9e-12 45.5 1.6 3.0 2 1 0 2 2 2 1 Domain of unknown function (DUF1744) DNA_pol_B PF00136.21 CCF75530.1 - 1.5e-11 43.7 3.7 1.7e-06 27.0 0.1 4.3 4 0 0 4 4 4 3 DNA polymerase family B DNA_pol_B_exo2 PF10108.9 CCF75530.1 - 4e-09 36.5 0.1 1.3e-08 34.8 0.1 1.8 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.6 CCF75530.1 - 9.3e-07 29.0 0.2 0.00014 21.9 0.0 3.2 2 0 0 2 2 2 1 RNase_H superfamily Casc1_N PF15927.5 CCF75530.1 - 0.066 12.9 0.2 0.2 11.3 0.2 1.8 1 0 0 1 1 1 0 Cancer susceptibility candidate 1 N-terminus SET PF00856.28 CCF75531.1 - 3.6e-18 66.5 2.2 3.6e-18 66.5 2.2 3.8 4 2 0 4 4 4 1 SET domain NLE PF08154.12 CCF75532.1 - 2.1e-07 31.4 0.0 4.5e-07 30.3 0.0 1.6 1 0 0 1 1 1 1 NLE (NUC135) domain WD40 PF00400.32 CCF75532.1 - 3.1e-07 31.0 10.6 0.0051 17.6 0.0 5.6 6 0 0 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75532.1 - 1.2e-06 28.7 1.0 2.1 8.7 0.0 5.4 1 1 4 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 CCF75532.1 - 0.00038 19.2 0.5 0.00086 18.1 0.1 1.7 2 0 0 2 2 2 1 Nucleoporin Nup120/160 THUMP PF02926.17 CCF75533.1 - 5.1e-05 23.4 0.0 8e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 THUMP domain UPF0020 PF01170.18 CCF75533.1 - 0.13 11.9 0.0 0.84 9.3 0.0 2.1 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 Peptidase_C78 PF07910.13 CCF75534.1 - 1.1e-35 123.0 1.1 1.8e-35 122.3 1.1 1.4 1 0 0 1 1 1 1 Peptidase family C78 Peptidase_C54 PF03416.19 CCF75534.1 - 0.00058 19.4 0.2 0.0012 18.4 0.0 1.7 2 0 0 2 2 2 1 Peptidase family C54 Ubie_methyltran PF01209.18 CCF75535.1 - 1.4e-66 224.2 0.1 9.8e-66 221.4 0.1 2.0 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 CCF75535.1 - 1.1e-12 48.4 0.0 3.7e-12 46.7 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF75535.1 - 1.3e-10 41.8 0.0 1.4e-08 35.4 0.0 3.3 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF75535.1 - 6.5e-07 29.3 0.0 1.5e-05 24.8 0.0 2.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF75535.1 - 1.2e-05 26.0 0.0 3.2e-05 24.6 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF75535.1 - 4.3e-05 23.4 0.0 6.6e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 CCF75535.1 - 0.00019 21.4 0.0 0.0037 17.2 0.0 2.2 2 0 0 2 2 2 1 Hypothetical methyltransferase SET PF00856.28 CCF75536.1 - 1.1e-19 71.4 0.4 2.3e-19 70.4 0.4 1.6 1 0 0 1 1 1 1 SET domain PHD PF00628.29 CCF75536.1 - 4.6e-15 55.2 65.0 8e-06 25.7 7.0 9.8 10 0 0 10 10 10 5 PHD-finger Bromodomain PF00439.25 CCF75536.1 - 1.5e-09 37.8 0.8 6.5e-09 35.7 0.3 2.2 2 0 0 2 2 2 1 Bromodomain Prok-RING_1 PF14446.6 CCF75536.1 - 0.0053 16.6 3.2 0.0053 16.6 3.2 7.2 8 0 0 8 8 8 2 Prokaryotic RING finger family 1 PUNUT PF16913.5 CCF75537.1 - 0.0045 16.3 15.9 0.11 11.7 15.3 2.4 1 1 0 1 1 1 1 Purine nucleobase transmembrane transport EamA PF00892.20 CCF75537.1 - 4.4 7.5 33.1 0.25 11.5 15.6 2.8 2 1 1 3 3 3 0 EamA-like transporter family FeS_assembly_P PF01883.19 CCF75538.1 - 1.2e-07 31.7 0.0 2.8e-07 30.6 0.0 1.6 2 0 0 2 2 2 1 Iron-sulfur cluster assembly protein Mad3_BUB1_I_2 PF17014.5 CCF75538.1 - 0.043 13.9 0.0 0.068 13.3 0.0 1.3 1 0 0 1 1 1 0 Putative Mad3/BUB1 like region 1 protein PPR PF01535.20 CCF75539.1 - 4.8e-16 57.8 4.5 0.0011 19.1 0.0 7.2 7 0 0 7 7 7 3 PPR repeat PPR_2 PF13041.6 CCF75539.1 - 7.5e-16 58.1 3.0 9.1e-07 29.0 0.1 5.1 4 1 1 5 5 5 3 PPR repeat family PPR_long PF17177.4 CCF75539.1 - 5.8e-06 25.8 2.3 0.00031 20.2 0.2 2.5 2 0 0 2 2 2 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 CCF75539.1 - 7.9e-06 25.5 1.3 0.14 11.9 0.0 3.9 4 0 0 4 4 4 2 PPR repeat PPR_3 PF13812.6 CCF75539.1 - 5.1e-05 23.3 2.8 4 7.6 0.0 5.3 4 2 3 7 7 7 2 Pentatricopeptide repeat domain ATP13 PF12921.7 CCF75539.1 - 0.0071 16.2 1.3 4.2 7.2 0.0 4.5 2 1 2 5 5 5 1 Mitochondrial ATPase expression TPR_2 PF07719.17 CCF75539.1 - 0.0082 16.2 4.5 2.8 8.3 0.0 4.5 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_1 PF00515.28 CCF75539.1 - 0.0095 15.7 6.6 1.8 8.5 0.1 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_14 PF13428.6 CCF75539.1 - 0.018 15.8 0.1 28 5.9 0.0 4.3 4 1 1 5 5 4 0 Tetratricopeptide repeat TPR_16 PF13432.6 CCF75539.1 - 0.071 13.8 0.1 1.9 9.2 0.0 2.9 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 CCF75539.1 - 0.072 13.4 0.2 4 7.8 0.0 3.5 3 1 0 3 3 3 0 Tetratricopeptide repeat AAA_2 PF07724.14 CCF75540.1 - 8.2e-42 143.2 0.0 1.1e-40 139.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 CCF75540.1 - 1.5e-22 79.4 0.2 3.3e-22 78.4 0.2 1.5 1 0 0 1 1 1 1 AAA lid domain AAA PF00004.29 CCF75540.1 - 1.3e-18 67.7 0.0 7.9e-11 42.5 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ClpB_D2-small PF10431.9 CCF75540.1 - 3.4e-15 55.9 0.1 1e-12 47.9 0.1 2.9 2 0 0 2 2 2 1 C-terminal, D2-small domain, of ClpB protein AAA_5 PF07728.14 CCF75540.1 - 3.2e-14 53.1 0.0 1.3e-08 34.9 0.0 3.2 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 CCF75540.1 - 1.6e-08 34.9 0.0 0.0009 19.5 0.1 3.8 2 1 0 2 2 2 2 AAA domain AAA_16 PF13191.6 CCF75540.1 - 2e-07 31.5 1.0 0.00023 21.6 0.0 4.1 3 1 1 4 4 4 1 AAA ATPase domain Sigma54_activat PF00158.26 CCF75540.1 - 1.6e-06 27.9 0.0 0.00093 18.9 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_14 PF13173.6 CCF75540.1 - 1.4e-05 25.1 0.0 0.09 12.8 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 CCF75540.1 - 3.1e-05 24.5 0.0 0.035 14.7 0.0 2.7 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 CCF75540.1 - 0.00012 21.6 0.0 0.21 11.0 0.0 2.9 1 1 1 2 2 2 2 Bacterial TniB protein IstB_IS21 PF01695.17 CCF75540.1 - 0.00021 21.0 0.0 0.07 12.9 0.0 2.6 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_3 PF07726.11 CCF75540.1 - 0.00038 20.3 0.1 0.5 10.2 0.1 3.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Clp_N PF02861.20 CCF75540.1 - 0.0024 17.9 0.1 0.028 14.6 0.0 2.7 2 1 0 2 2 2 1 Clp amino terminal domain, pathogenicity island component RNA_helicase PF00910.22 CCF75540.1 - 0.0029 18.0 0.1 1.9 8.9 0.0 3.5 3 0 0 3 3 3 1 RNA helicase AAA_7 PF12775.7 CCF75540.1 - 0.02 14.4 0.0 2.5 7.6 0.0 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region ATPase_2 PF01637.18 CCF75540.1 - 0.02 14.8 2.1 2.4 8.0 0.0 3.5 3 1 0 4 4 3 0 ATPase domain predominantly from Archaea Roc PF08477.13 CCF75540.1 - 0.024 14.9 0.0 0.66 10.2 0.0 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_30 PF13604.6 CCF75540.1 - 0.026 14.3 0.0 1.5 8.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 CCF75540.1 - 0.034 14.2 0.0 2.7 8.0 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DNA_pol3_delta2 PF13177.6 CCF75540.1 - 0.086 12.6 0.0 5.9 6.6 0.0 3.2 3 0 0 3 3 3 0 DNA polymerase III, delta subunit Mg_chelatase PF01078.21 CCF75540.1 - 0.089 12.2 0.1 10 5.4 0.0 2.8 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 CCF75540.1 - 0.16 11.3 0.0 7.9 5.7 0.0 2.6 2 0 0 2 2 2 0 Zeta toxin NACHT PF05729.12 CCF75540.1 - 0.16 11.9 0.0 0.62 10.0 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.6 CCF75540.1 - 0.18 11.4 0.0 0.39 10.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain Metallophos_2 PF12850.7 CCF75541.1 - 1.9e-12 47.7 0.0 2.4e-12 47.4 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 CCF75541.1 - 0.0066 17.0 0.5 0.1 13.1 0.5 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase DUF3273 PF11677.8 CCF75542.1 - 8.3e-92 307.2 7.4 9.4e-92 307.1 7.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3273) H2O2_YaaD PF03883.14 CCF75542.1 - 0.025 14.1 0.0 0.035 13.6 0.0 1.2 1 0 0 1 1 1 0 Peroxide stress protein YaaA DUF2569 PF10754.9 CCF75542.1 - 2.9 8.3 10.5 2.7 8.4 8.9 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF2569) Radical_SAM PF04055.21 CCF75543.1 - 1.5e-16 61.2 0.0 2.2e-16 60.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 CCF75543.1 - 0.0004 20.5 0.0 0.0011 19.1 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 CCF75543.1 - 0.018 15.3 0.0 0.068 13.4 0.0 2.0 2 0 0 2 2 2 0 4Fe-4S single cluster domain LCCL PF03815.19 CCF75544.1 - 4.3e-72 238.3 8.5 1.2e-18 67.0 0.1 5.1 5 0 0 5 5 5 4 LCCL domain SRCR PF00530.18 CCF75544.1 - 2e-28 98.8 15.8 2.1e-17 63.5 1.2 2.8 2 0 0 2 2 2 2 Scavenger receptor cysteine-rich domain PLAT PF01477.23 CCF75544.1 - 1.2e-09 38.8 0.2 7.1e-09 36.3 0.0 2.4 2 0 0 2 2 2 1 PLAT/LH2 domain Rxt3 PF08642.10 CCF75544.1 - 5.9e-09 36.8 0.2 1.2 9.9 0.0 5.1 3 2 2 5 5 5 3 Histone deacetylation protein Rxt3 Laminin_G_3 PF13385.6 CCF75544.1 - 7.5e-07 29.4 1.0 1.7e-06 28.3 1.0 1.6 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily SRCR_2 PF15494.6 CCF75544.1 - 2.9e-05 24.5 7.7 0.02 15.4 3.1 3.2 3 0 0 3 3 3 2 Scavenger receptor cysteine-rich domain Hepsin-SRCR PF09272.10 CCF75544.1 - 0.0015 19.0 0.5 0.53 10.8 0.0 2.9 2 1 0 2 2 2 1 Hepsin, SRCR domain Fibrillarin PF01269.17 CCF75545.1 - 1.5e-103 344.8 0.0 1.8e-103 344.5 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 CCF75545.1 - 0.00038 20.2 0.0 0.00054 19.7 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltr_RsmB-F PF01189.17 CCF75545.1 - 0.0062 16.2 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F DREV PF05219.12 CCF75545.1 - 0.24 10.5 0.0 0.34 10.0 0.0 1.2 1 0 0 1 1 1 0 DREV methyltransferase DASH_Dad1 PF08649.10 CCF75546.1 - 0.071 13.3 1.0 0.17 12.1 1.0 1.7 1 0 0 1 1 1 0 DASH complex subunit Dad1 T2SSF PF00482.23 CCF75546.1 - 0.22 11.5 0.7 2.6 8.0 0.4 2.1 1 1 1 2 2 2 0 Type II secretion system (T2SS), protein F DUF3113 PF11310.8 CCF75546.1 - 0.34 10.9 5.8 0.14 12.1 1.1 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3113) Cytochrom_B562 PF07361.11 CCF75546.1 - 1.3 9.8 5.8 2.5 8.8 0.3 2.6 3 0 0 3 3 3 0 Cytochrome b562 PRP38 PF03371.15 CCF75547.1 - 2.1e-41 141.7 1.5 3.4e-41 141.0 1.5 1.3 1 0 0 1 1 1 1 PRP38 family CDC45 PF02724.14 CCF75547.1 - 6.7 4.9 10.2 9.1 4.4 10.2 1.1 1 0 0 1 1 1 0 CDC45-like protein Trm112p PF03966.16 CCF75548.1 - 2.1e-09 37.8 0.0 2.6e-09 37.5 0.0 1.1 1 0 0 1 1 1 1 Trm112p-like protein Mon2_C PF16206.5 CCF75548.1 - 0.044 11.9 0.0 0.045 11.9 0.0 1.0 1 0 0 1 1 1 0 C-terminal region of Mon2 protein zinc_ribbon_4 PF13717.6 CCF75548.1 - 0.11 12.4 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 zinc-ribbon domain Pkinase PF00069.25 CCF75549.1 - 9.5e-43 146.5 0.3 2.2e-39 135.4 0.0 3.8 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75549.1 - 3.1e-17 62.7 0.0 2.8e-12 46.5 0.0 3.6 3 1 0 3 3 3 3 Protein tyrosine kinase ACDC PF14733.6 CCF75550.1 - 4.8e-22 78.1 4.3 1.1e-21 76.9 4.3 1.7 1 0 0 1 1 1 1 AP2-coincident C-terminal AP2 PF00847.20 CCF75550.1 - 6.2e-18 64.8 1.1 1e-17 64.0 1.1 1.4 1 0 0 1 1 1 1 AP2 domain Ubiq_cyt_C_chap PF03981.12 CCF75551.1 - 2.4e-09 37.4 3.0 1.7e-08 34.6 3.0 1.9 1 1 0 1 1 1 1 Ubiquinol-cytochrome C chaperone MMR_HSR1 PF01926.23 CCF75552.1 - 1.6e-13 50.7 0.0 4.9e-13 49.2 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 CCF75552.1 - 6.6e-07 29.1 0.0 4.1e-06 26.5 0.0 2.3 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 CCF75552.1 - 0.0067 15.8 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 AIG1 family Arf PF00025.21 CCF75552.1 - 0.028 13.9 0.1 0.18 11.3 0.1 2.1 1 1 0 1 1 1 0 ADP-ribosylation factor family Dynamin_N PF00350.23 CCF75552.1 - 0.052 13.6 0.5 0.59 10.2 0.6 2.1 1 1 1 2 2 2 0 Dynamin family FeoB_N PF02421.18 CCF75552.1 - 0.056 13.0 0.0 0.22 11.1 0.0 1.9 2 1 0 2 2 2 0 Ferrous iron transport protein B KH_2 PF07650.17 CCF75552.1 - 0.061 13.1 0.3 0.12 12.2 0.3 1.6 1 0 0 1 1 1 0 KH domain LsmAD PF06741.13 CCF75553.1 - 3.3e-08 34.0 0.1 6.7e-08 33.0 0.1 1.5 1 0 0 1 1 1 1 LsmAD domain PAM2 PF07145.15 CCF75553.1 - 0.00053 19.5 2.1 0.00053 19.5 2.1 2.0 2 0 0 2 2 2 1 Ataxin-2 C-terminal region CUTL PF16557.5 CCF75553.1 - 0.032 14.4 0.2 0.072 13.3 0.2 1.6 1 0 0 1 1 1 0 CUT1-like DNA-binding domain of SATB DBP10CT PF08147.12 CCF75554.1 - 0.059 13.6 1.3 0.2 11.9 0.1 2.2 1 1 1 2 2 2 0 DBP10CT (NUC160) domain DUF3899 PF13038.6 CCF75554.1 - 0.087 13.3 0.9 0.22 12.0 0.9 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF3899) Helicase_C_2 PF13307.6 CCF75555.1 - 5.7e-52 176.3 0.0 1.5e-51 174.9 0.0 1.8 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 CCF75555.1 - 6.2e-45 153.0 1.1 1.5e-44 151.7 1.1 1.7 1 0 0 1 1 1 1 DEAD_2 ResIII PF04851.15 CCF75555.1 - 6.5e-07 29.5 0.7 5.1e-06 26.6 0.1 2.6 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 CCF75555.1 - 7.5e-07 29.1 0.1 2e-05 24.5 0.0 2.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase PhoH PF02562.16 CCF75555.1 - 0.004 16.6 0.5 0.76 9.2 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein Vps26 PF03643.15 CCF75557.1 - 3.7e-84 282.0 1.4 4.2e-84 281.8 1.4 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 TFIIA_gamma_C PF02751.14 CCF75558.1 - 0.0054 16.8 0.2 0.0054 16.8 0.2 1.9 2 1 0 2 2 2 1 Transcription initiation factor IIA, gamma subunit RSN1_7TM PF02714.15 CCF75559.1 - 1.8e-20 73.4 16.7 1.8e-20 73.4 16.7 2.8 3 0 0 3 3 3 1 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 CCF75559.1 - 1.1e-09 38.8 0.0 2.4e-08 34.4 0.0 2.4 1 1 0 1 1 1 1 Cytosolic domain of 10TM putative phosphate transporter Myc_N PF01056.18 CCF75559.1 - 0.17 11.7 4.0 0.28 11.0 4.0 1.2 1 0 0 1 1 1 0 Myc amino-terminal region DUF3827 PF12877.7 CCF75559.1 - 0.24 9.8 3.3 0.36 9.2 3.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3827) Pkinase PF00069.25 CCF75561.1 - 1.8e-48 165.2 0.0 3.2e-48 164.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75561.1 - 7.4e-21 74.6 0.0 1.4e-20 73.7 0.0 1.4 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF75561.1 - 0.00035 20.0 0.0 0.00059 19.2 0.0 1.3 1 0 0 1 1 1 1 Kinase-like ATP-synt_D PF01813.17 CCF75561.1 - 0.059 13.2 3.9 0.12 12.2 1.0 2.2 2 0 0 2 2 2 0 ATP synthase subunit D tRNA-synt_1b PF00579.25 CCF75562.1 - 9.5e-47 159.7 0.0 1.2e-46 159.4 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) DUF5424 PF17462.2 CCF75562.1 - 0.052 13.5 0.1 0.13 12.2 0.1 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5424) eIF3_p135 PF12807.7 CCF75562.1 - 0.12 12.4 0.0 0.24 11.4 0.0 1.5 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit 135 WD40 PF00400.32 CCF75565.1 - 1.4e-10 41.6 7.9 0.0049 17.7 0.4 5.4 5 1 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75565.1 - 8e-08 32.5 0.2 5.7e-05 23.3 0.2 3.2 2 1 1 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_4 PF16300.5 CCF75565.1 - 1.1e-06 28.4 0.0 2.3e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 Type of WD40 repeat DUF1899 PF08953.11 CCF75565.1 - 0.0013 18.5 0.4 0.032 14.1 0.4 2.8 1 1 0 1 1 1 1 Domain of unknown function (DUF1899) Ge1_WD40 PF16529.5 CCF75565.1 - 0.0014 17.6 0.0 0.013 14.5 0.0 2.1 1 1 1 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Frtz PF11768.8 CCF75565.1 - 0.0028 16.0 0.1 0.0045 15.4 0.1 1.2 1 0 0 1 1 1 1 WD repeat-containing and planar cell polarity effector protein Fritz Ribosomal_L26 PF16906.5 CCF75566.1 - 6.1e-40 135.6 3.7 7.9e-40 135.2 3.7 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 CCF75566.1 - 0.00018 21.3 0.5 0.00045 20.1 0.5 1.7 1 0 0 1 1 1 1 KOW motif CofC PF01983.16 CCF75567.1 - 0.061 12.5 0.2 0.095 11.9 0.1 1.3 1 1 0 1 1 1 0 Guanylyl transferase CofC like EF-hand_1 PF00036.32 CCF75568.1 - 2.1e-06 26.9 0.2 5.2e-06 25.6 0.1 1.8 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 CCF75568.1 - 8e-05 22.3 0.2 0.00018 21.2 0.1 1.7 2 0 0 2 2 2 1 EF-hand domain EF-hand_5 PF13202.6 CCF75568.1 - 0.00074 18.9 0.2 0.0018 17.7 0.2 1.7 1 0 0 1 1 1 1 EF hand EF-hand_7 PF13499.6 CCF75568.1 - 0.001 19.5 0.0 0.0015 19.0 0.0 1.2 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_8 PF13833.6 CCF75568.1 - 0.071 13.0 0.3 0.18 11.6 0.1 1.8 2 1 0 2 2 2 0 EF-hand domain pair Peptidase_M24 PF00557.24 CCF75569.1 - 2.2e-46 158.2 0.1 2.7e-46 157.9 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 UCH PF00443.29 CCF75570.1 - 6.6e-36 124.1 1.2 8.7e-36 123.7 1.2 1.2 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase ubiquitin PF00240.23 CCF75570.1 - 2.5e-07 30.3 0.3 8.6e-07 28.6 0.0 2.1 2 0 0 2 2 2 1 Ubiquitin family UCH_1 PF13423.6 CCF75570.1 - 9.3e-07 28.7 7.6 7.9e-06 25.7 3.6 2.3 1 1 1 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase PUF PF00806.19 CCF75570.1 - 0.063 13.0 0.0 0.19 11.5 0.0 1.8 1 0 0 1 1 1 0 Pumilio-family RNA binding repeat DER1 PF04511.15 CCF75571.1 - 1.4e-35 123.0 19.8 1.7e-35 122.7 19.8 1.1 1 0 0 1 1 1 1 Der1-like family TFIID-31kDa PF02291.15 CCF75572.1 - 6.3e-08 32.7 0.0 8.3e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit PCI PF01399.27 CCF75573.1 - 1.1e-10 42.0 1.2 1.9e-10 41.2 0.2 2.0 2 0 0 2 2 2 1 PCI domain RPN6_N PF18055.1 CCF75573.1 - 2.6e-07 31.0 0.0 6.3e-07 29.8 0.0 1.7 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN6 N-terminal domain RPN7 PF10602.9 CCF75573.1 - 0.025 14.3 0.1 0.053 13.2 0.1 1.6 1 0 0 1 1 1 0 26S proteasome subunit RPN7 Glycos_transf_1 PF00534.20 CCF75574.1 - 8.1e-29 100.3 0.0 1.7e-28 99.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 PIGA PF08288.12 CCF75574.1 - 3.8e-27 94.7 0.2 9.1e-27 93.5 0.2 1.7 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_4 PF13439.6 CCF75574.1 - 2.4e-22 79.7 0.0 3.6e-22 79.2 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_4 PF13692.6 CCF75574.1 - 4.6e-22 78.9 0.0 8.2e-22 78.1 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_2 PF13477.6 CCF75574.1 - 2.3e-05 24.5 0.1 5.7e-05 23.2 0.1 1.6 1 0 0 1 1 1 1 Glycosyl transferase 4-like DUF5370 PF17340.2 CCF75574.1 - 0.013 15.4 0.1 0.036 14.0 0.1 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5370) Imm8 PF15586.6 CCF75574.1 - 0.026 14.5 0.0 0.066 13.3 0.0 1.6 1 0 0 1 1 1 0 Immunity protein 8 AAA_14 PF13173.6 CCF75575.1 - 5.6e-06 26.4 0.1 2.3e-05 24.5 0.1 2.0 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 CCF75575.1 - 0.0006 20.2 0.0 0.0055 17.1 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain RNA_helicase PF00910.22 CCF75575.1 - 0.046 14.1 0.7 0.33 11.4 0.0 2.6 3 1 0 3 3 3 0 RNA helicase NACHT PF05729.12 CCF75575.1 - 0.094 12.6 0.0 0.2 11.6 0.0 1.6 1 0 0 1 1 1 0 NACHT domain LHH PF14411.6 CCF75575.1 - 0.1 12.8 0.0 0.21 11.7 0.0 1.5 1 0 0 1 1 1 0 A nuclease of the HNH/ENDO VII superfamily with conserved LHH NB-ARC PF00931.22 CCF75575.1 - 0.13 11.4 0.0 0.26 10.5 0.0 1.6 1 0 0 1 1 1 0 NB-ARC domain DCP1 PF06058.13 CCF75576.1 - 2.1e-27 95.4 0.1 2.9e-27 94.9 0.1 1.2 1 0 0 1 1 1 1 Dcp1-like decapping family SAC3_GANP PF03399.16 CCF75577.1 - 9.6e-43 146.6 1.2 9.6e-43 146.6 1.2 2.1 3 0 0 3 3 3 1 SAC3/GANP family Di19_C PF14571.6 CCF75577.1 - 0.0029 18.1 0.8 0.061 13.9 0.5 3.1 2 0 0 2 2 2 1 Stress-induced protein Di19, C-terminal DUF3867 PF12983.7 CCF75577.1 - 0.012 15.7 2.4 0.024 14.7 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3867) zf-U1 PF06220.12 CCF75579.1 - 8.3e-06 25.5 0.9 1.6e-05 24.5 0.9 1.5 1 0 0 1 1 1 1 U1 zinc finger WW PF00397.26 CCF75579.1 - 9.3e-05 22.4 0.5 0.00031 20.8 0.0 2.2 2 0 0 2 2 2 1 WW domain DUF1682 PF07946.14 CCF75579.1 - 0.036 13.3 4.1 2.1 7.5 0.7 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1682) Band_3_cyto PF07565.13 CCF75579.1 - 0.46 10.2 2.2 0.25 11.1 0.2 1.6 2 0 0 2 2 2 0 Band 3 cytoplasmic domain Ribosomal_S27 PF01599.19 CCF75580.1 - 3e-23 81.7 1.8 3e-23 81.7 1.8 1.9 2 0 0 2 2 2 1 Ribosomal protein S27a Hairy_orange PF07527.13 CCF75580.1 - 0.054 13.7 0.1 0.14 12.4 0.0 1.7 2 0 0 2 2 2 0 Hairy Orange DUF5124 PF17160.4 CCF75580.1 - 0.077 13.8 0.0 0.12 13.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5124) CTD_bind PF04818.13 CCF75581.1 - 1.4e-08 35.4 0.2 3.4e-08 34.2 0.2 1.7 1 0 0 1 1 1 1 RNA polymerase II-binding domain. Surp PF01805.20 CCF75581.1 - 1.7e-07 31.1 0.0 4e-07 29.9 0.0 1.6 1 0 0 1 1 1 1 Surp module Ribosomal_S2 PF00318.20 CCF75583.1 - 6.4e-29 100.7 0.9 1.9e-14 53.5 0.2 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 PPI_Ypi1 PF07491.11 CCF75583.1 - 3.4e-08 33.2 7.6 7.1e-08 32.2 7.6 1.6 1 0 0 1 1 1 1 Protein phosphatase inhibitor 40S_SA_C PF16122.5 CCF75583.1 - 2.7 9.4 8.4 0.71 11.3 4.9 1.9 2 0 0 2 2 2 0 40S ribosomal protein SA C-terminus Cyclin_N PF00134.23 CCF75584.1 - 0.0088 15.8 0.0 0.027 14.2 0.0 1.8 1 1 0 1 1 1 1 Cyclin, N-terminal domain F-box PF00646.33 CCF75586.1 - 0.04 13.8 0.6 0.11 12.4 0.2 1.9 2 0 0 2 2 2 0 F-box domain Tox-MPTase3 PF15639.6 CCF75586.1 - 0.045 13.6 0.2 0.15 11.9 0.1 1.9 2 0 0 2 2 2 0 Metallopeptidase toxin 3 RimM PF01782.18 CCF75587.1 - 3.6e-12 46.3 0.0 9.5e-12 45.0 0.0 1.8 1 0 0 1 1 1 1 RimM N-terminal domain zf-H2C2_2 PF13465.6 CCF75587.1 - 0.044 14.2 1.1 0.1 13.0 1.1 1.7 1 0 0 1 1 1 0 Zinc-finger double domain zf-C2H2_6 PF13912.6 CCF75587.1 - 0.078 13.0 1.2 0.18 11.9 1.2 1.6 1 0 0 1 1 1 0 C2H2-type zinc finger zf-C2H2 PF00096.26 CCF75587.1 - 0.45 11.1 2.2 1.2 9.7 2.2 1.8 1 0 0 1 1 1 0 Zinc finger, C2H2 type Rad9 PF04139.13 CCF75588.1 - 5.5e-20 71.9 1.1 9.9e-20 71.0 1.1 1.3 1 0 0 1 1 1 1 Rad9 PCNA_N PF00705.18 CCF75588.1 - 0.049 13.3 0.2 0.19 11.5 0.1 2.2 2 1 0 2 2 2 0 Proliferating cell nuclear antigen, N-terminal domain DPPIV_N PF00930.21 CCF75589.1 - 0.015 14.1 0.1 0.039 12.7 0.2 1.5 1 1 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region zf-C2H2_aberr PF17017.5 CCF75590.1 - 0.029 14.5 0.4 0.12 12.5 0.4 2.1 1 0 0 1 1 1 0 Aberrant zinc-finger HNH_4 PF13395.6 CCF75590.1 - 0.031 14.2 0.0 0.11 12.5 0.0 1.9 1 0 0 1 1 1 0 HNH endonuclease tRNA-synt_1 PF00133.22 CCF75591.1 - 2.6e-178 594.1 0.0 5.5e-177 589.7 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 CCF75591.1 - 1.2e-29 103.3 0.2 2.6e-29 102.2 0.2 1.6 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 CCF75591.1 - 1.1e-16 60.7 0.1 1.1e-07 31.0 0.0 3.4 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 CCF75591.1 - 2.8e-07 30.3 0.0 5.8e-07 29.2 0.0 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1b PF00579.25 CCF75591.1 - 0.00093 18.6 0.1 0.049 12.9 0.0 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (W and Y) tRNA-synt_1e PF01406.19 CCF75591.1 - 0.0015 17.9 0.0 2 7.7 0.0 2.5 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1c PF00749.21 CCF75591.1 - 0.06 12.2 0.0 0.19 10.6 0.0 1.8 2 0 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain Val_tRNA-synt_C PF10458.9 CCF75591.1 - 0.14 12.4 0.8 0.3 11.4 0.8 1.6 1 0 0 1 1 1 0 Valyl tRNA synthetase tRNA binding arm eIF-3c_N PF05470.12 CCF75592.1 - 1.1e-108 364.2 8.5 1.8e-108 363.4 8.5 1.2 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus PCI PF01399.27 CCF75592.1 - 9.9e-12 45.3 0.0 1.5e-10 41.5 0.0 3.1 3 1 0 3 3 3 1 PCI domain Katanin_con80 PF13925.6 CCF75592.1 - 0.13 12.3 1.0 4.8 7.2 0.1 2.9 3 0 0 3 3 3 0 con80 domain of Katanin FXMRP1_C_core PF12235.8 CCF75592.1 - 3 8.5 11.0 9.8 6.8 11.0 1.9 1 0 0 1 1 1 0 Fragile X-related 1 protein core C terminal SEEEED PF14797.6 CCF75592.1 - 3.2 7.9 40.5 1 9.5 31.7 2.8 2 0 0 2 2 2 0 Serine-rich region of AP3B1, clathrin-adaptor complex Nucleoporin2 PF04096.14 CCF75593.1 - 4.7e-27 94.9 0.0 1.1e-26 93.7 0.0 1.6 1 0 0 1 1 1 1 Nucleoporin autopeptidase Nucleoporin_FG PF13634.6 CCF75593.1 - 0.001 19.9 30.5 0.001 19.9 30.5 2.9 2 1 1 3 3 3 2 Nucleoporin FG repeat region GldM_N PF12081.8 CCF75593.1 - 0.085 12.9 0.8 0.53 10.3 0.0 2.4 2 1 1 3 3 3 0 GldM N-terminal domain Ribosomal_S21e PF01249.18 CCF75594.1 - 9.3e-34 115.4 0.1 1e-33 115.3 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S21e Img2 PF05046.14 CCF75595.1 - 3.5e-17 62.5 0.0 5e-17 62.0 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) YlmH_RBD PF17774.1 CCF75595.1 - 0.097 13.0 0.0 0.16 12.3 0.0 1.4 1 0 0 1 1 1 0 Putative RNA-binding domain in YlmH Creatinase_N_2 PF16189.5 CCF75596.1 - 9.5e-46 155.8 0.8 8.4e-45 152.8 0.9 2.3 3 0 0 3 3 3 1 Creatinase/Prolidase N-terminal domain Peptidase_M24 PF00557.24 CCF75596.1 - 9.4e-37 126.7 0.0 1.4e-36 126.2 0.0 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 CCF75596.1 - 9.5e-21 74.8 0.0 5.7e-15 56.1 0.0 2.5 2 0 0 2 2 2 2 Creatinase/Prolidase N-terminal domain Peptidase_M24_C PF16188.5 CCF75596.1 - 9.2e-20 70.5 0.1 2.2e-19 69.3 0.1 1.7 1 0 0 1 1 1 1 C-terminal region of peptidase_M24 HEPN_Swt1 PF18731.1 CCF75597.1 - 6.1e-05 23.3 0.1 0.00019 21.8 0.1 1.8 1 0 0 1 1 1 1 Swt1-like HEPN DUF3987 PF13148.6 CCF75597.1 - 0.012 14.6 0.0 0.019 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3987) tRNA_synthFbeta PF17759.1 CCF75598.1 - 1.5e-25 89.9 0.0 3e-25 88.9 0.0 1.5 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain PhetRS_B1 PF18262.1 CCF75598.1 - 4.3e-24 84.5 0.1 1.4e-23 82.8 0.0 2.0 2 0 0 2 2 2 1 Phe-tRNA synthetase beta subunit B1 domain B3_4 PF03483.17 CCF75598.1 - 6.2e-21 74.8 0.1 9.9e-21 74.2 0.1 1.3 1 0 0 1 1 1 1 B3/4 domain B5 PF03484.15 CCF75598.1 - 2.8e-09 37.1 0.0 5e-05 23.5 0.0 3.0 3 0 0 3 3 3 2 tRNA synthetase B5 domain AP2 PF00847.20 CCF75599.1 - 1.7e-13 50.5 0.7 4.2e-13 49.3 0.7 1.6 1 0 0 1 1 1 1 AP2 domain PPTA PF01239.22 CCF75600.1 - 1.1e-12 47.2 18.9 0.012 15.3 0.1 6.5 6 0 0 6 6 6 4 Protein prenyltransferase alpha subunit repeat LRR_1 PF00560.33 CCF75600.1 - 0.0061 16.9 8.1 32 5.6 0.5 5.2 5 0 0 5 5 5 1 Leucine Rich Repeat LRR_8 PF13855.6 CCF75600.1 - 0.011 15.5 4.1 2.6 7.9 1.2 3.0 2 0 0 2 2 2 0 Leucine rich repeat LRR_4 PF12799.7 CCF75600.1 - 0.44 11.0 10.9 2.4 8.7 6.4 4.0 3 1 1 4 4 4 0 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 CCF75600.1 - 8.8 6.7 7.5 5.3 7.4 0.6 3.6 4 0 0 4 4 4 0 Leucine Rich repeat Sec7 PF01369.20 CCF75601.1 - 1.2e-53 181.6 0.0 3.5e-53 180.0 0.0 1.8 1 0 0 1 1 1 1 Sec7 domain Ribosomal_TL5_C PF14693.6 CCF75602.1 - 0.0018 18.6 0.0 0.0031 17.8 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein TL5, C-terminal domain Ribosomal_L25p PF01386.19 CCF75602.1 - 0.0038 17.7 0.0 0.01 16.4 0.0 1.8 1 1 0 1 1 1 1 Ribosomal L25p family Aminotran_1_2 PF00155.21 CCF75603.1 - 1.8e-43 149.1 0.0 2.1e-43 148.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II PS_Dcarbxylase PF02666.15 CCF75604.1 - 1.7e-42 145.3 0.0 2.1e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Phosphatidylserine decarboxylase COX5B PF01215.19 CCF75605.1 - 9.4e-12 44.7 0.0 1.7e-11 43.9 0.0 1.4 1 0 0 1 1 1 1 Cytochrome c oxidase subunit Vb Histone PF00125.24 CCF75606.1 - 1e-20 74.4 0.7 1.4e-20 74.0 0.7 1.2 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TAF PF02969.17 CCF75606.1 - 0.0029 17.8 0.2 0.006 16.7 0.2 1.5 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CENP-T_C PF15511.6 CCF75606.1 - 0.032 14.3 0.0 0.053 13.7 0.0 1.3 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 CCF75606.1 - 0.086 13.2 0.1 0.18 12.2 0.1 1.5 1 0 0 1 1 1 0 CENP-S protein Metallophos PF00149.28 CCF75607.1 - 1.2e-36 127.1 0.3 1.7e-36 126.6 0.3 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 CCF75607.1 - 0.0046 17.4 1.1 0.0095 16.4 1.1 1.4 1 0 0 1 1 1 1 Serine-threonine protein phosphatase N-terminal domain Glyco_hydro_65N PF03636.15 CCF75607.1 - 0.17 11.5 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 65, N-terminal domain SLBP_RNA_bind PF15247.6 CCF75608.1 - 3.6e-23 81.5 1.2 9.9e-23 80.1 1.2 1.8 1 0 0 1 1 1 1 Histone RNA hairpin-binding protein RNA-binding domain tRNA-synt_2b PF00587.25 CCF75608.1 - 4.2e-23 82.2 0.1 8.5e-23 81.2 0.1 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) MG4 PF17789.1 CCF75608.1 - 0.54 10.4 4.0 0.17 12.1 0.6 1.9 2 0 0 2 2 2 0 Macroglobulin domain MG4 Hist_deacetyl PF00850.19 CCF75609.1 - 1.7e-79 267.5 0.0 2.2e-79 267.2 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain Thioredoxin PF00085.20 CCF75610.1 - 9.1e-20 70.6 0.2 1.3e-17 63.7 0.1 2.2 2 0 0 2 2 2 1 Thioredoxin Yippee-Mis18 PF03226.14 CCF75610.1 - 1.4e-13 50.9 1.5 2.4e-13 50.2 1.5 1.3 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly Glutaredoxin PF00462.24 CCF75610.1 - 0.00082 19.5 0.0 0.0017 18.5 0.0 1.6 1 0 0 1 1 1 1 Glutaredoxin Zn_ribbon_recom PF13408.6 CCF75610.1 - 0.0053 17.3 2.3 0.027 15.0 0.5 2.3 2 0 0 2 2 2 1 Recombinase zinc beta ribbon domain Thioredoxin_8 PF13905.6 CCF75610.1 - 0.0072 16.6 0.1 0.022 15.1 0.0 1.8 2 1 0 2 2 2 1 Thioredoxin-like Thioredoxin_9 PF14595.6 CCF75610.1 - 0.032 14.0 0.6 0.048 13.4 0.0 1.6 2 0 0 2 2 2 0 Thioredoxin zinc_ribbon_6 PF14599.6 CCF75610.1 - 0.04 13.9 0.1 0.04 13.9 0.1 2.8 3 0 0 3 3 3 0 Zinc-ribbon RIG-I_C-RD PF11648.8 CCF75610.1 - 0.044 14.0 0.6 0.09 13.0 0.6 1.6 1 0 0 1 1 1 0 C-terminal domain of RIG-I SelR PF01641.18 CCF75610.1 - 0.068 13.2 0.6 1.2 9.2 0.1 2.2 1 1 1 2 2 2 0 SelR domain OST3_OST6 PF04756.13 CCF75610.1 - 0.11 11.8 0.0 0.16 11.3 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HNH_5 PF14279.6 CCF75610.1 - 0.14 12.0 2.5 1.4 8.8 0.1 2.9 3 0 0 3 3 3 0 HNH endonuclease V-ATPase_C PF03223.15 CCF75611.1 - 1.6e-75 254.8 1.9 1.9e-75 254.6 1.9 1.0 1 0 0 1 1 1 1 V-ATPase subunit C BRCT_2 PF16589.5 CCF75612.1 - 2.5e-07 31.0 0.0 1.2e-06 28.8 0.0 2.2 2 0 0 2 2 2 1 BRCT domain, a BRCA1 C-terminus domain MMR_HSR1 PF01926.23 CCF75613.1 - 2.7e-09 37.1 0.0 2.2e-08 34.2 0.0 2.2 1 1 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 CCF75613.1 - 7.4e-08 32.5 0.0 2.2e-07 30.9 0.0 1.8 1 1 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 CCF75613.1 - 0.00034 20.2 0.0 0.039 13.5 0.0 2.5 2 1 0 2 2 2 2 Ferrous iron transport protein B Ras PF00071.22 CCF75613.1 - 0.11 12.1 0.0 13 5.4 0.0 2.2 2 0 0 2 2 2 0 Ras family HECT PF00632.25 CCF75615.1 - 2.5e-82 276.8 0.1 4.5e-82 276.0 0.1 1.4 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Bcl-2_3 PF15286.6 CCF75616.1 - 0.05 14.3 0.6 0.079 13.6 0.1 1.5 2 0 0 2 2 2 0 Apoptosis regulator M11, B cell 2 leukaemia/lymphoma like tRNA_anti-codon PF01336.25 CCF75616.1 - 0.063 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain RPA_C PF08784.11 CCF75616.1 - 0.11 13.1 0.1 0.21 12.2 0.1 1.4 1 0 0 1 1 1 0 Replication protein A C terminal Hydrolase_4 PF12146.8 CCF75617.1 - 6.2e-13 48.6 0.0 1.1e-07 31.4 0.0 2.3 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 CCF75617.1 - 9.6e-06 25.4 0.1 0.037 13.7 0.0 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 CCF75617.1 - 0.0059 17.2 0.0 0.02 15.5 0.0 1.6 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF818 PF05677.12 CCF75617.1 - 0.0064 15.5 0.0 0.013 14.5 0.0 1.5 1 0 0 1 1 1 1 Chlamydia CHLPS protein (DUF818) Peptidase_S9 PF00326.21 CCF75617.1 - 0.0082 15.6 0.0 0.33 10.4 0.0 2.2 2 0 0 2 2 2 1 Prolyl oligopeptidase family DUF1057 PF06342.12 CCF75617.1 - 0.055 12.5 0.0 1.9 7.5 0.0 2.3 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1057) FSH1 PF03959.13 CCF75617.1 - 0.081 12.6 0.0 0.14 11.8 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) DLH PF01738.18 CCF75617.1 - 0.095 12.2 0.0 0.2 11.2 0.0 1.5 1 0 0 1 1 1 0 Dienelactone hydrolase family ORC3_N PF07034.11 CCF75618.1 - 0.0077 15.4 0.4 0.036 13.2 0.2 2.0 2 0 0 2 2 2 1 Origin recognition complex (ORC) subunit 3 N-terminus Mito_carr PF00153.27 CCF75619.1 - 4.6e-56 186.7 0.4 2.1e-20 72.4 0.1 3.3 3 0 0 3 3 3 3 Mitochondrial carrier protein RRP14 PF15459.6 CCF75621.1 - 0.023 15.3 1.2 0.078 13.6 1.1 2.0 1 1 0 1 1 1 0 60S ribosome biogenesis protein Rrp14 PGI PF00342.19 CCF75624.1 - 4.5e-163 543.3 0.0 5.2e-163 543.1 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase DUF676 PF05057.14 CCF75625.1 - 6.1e-08 32.4 0.7 2.8e-07 30.3 0.7 2.0 1 1 0 1 1 1 1 Putative serine esterase (DUF676) CBF PF03914.17 CCF75626.1 - 3e-25 89.2 1.2 9.1e-25 87.7 0.6 2.2 1 1 0 1 1 1 1 CBF/Mak21 family DUF5398 PF17376.2 CCF75626.1 - 0.026 15.1 1.0 0.13 12.9 0.4 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5398) Pilin_PilX PF11530.8 CCF75626.1 - 0.078 12.9 0.2 11 6.0 0.0 2.6 2 0 0 2 2 2 0 Minor type IV pilin, PilX Cnd1 PF12717.7 CCF75626.1 - 0.46 10.5 8.8 0.18 11.9 0.7 3.8 2 2 1 3 3 3 0 non-SMC mitotic condensation complex subunit 1 ARL2_Bind_BART PF11527.8 CCF75626.1 - 7 6.8 13.9 0.32 11.1 0.2 3.4 3 1 0 3 3 3 0 The ARF-like 2 binding protein BART RNA_GG_bind PF10258.9 CCF75627.1 - 1.7e-18 66.4 0.2 2.3e-18 66.0 0.2 1.2 1 0 0 1 1 1 1 PHAX RNA-binding domain AAA PF00004.29 CCF75628.1 - 4.5e-31 108.0 0.0 1.2e-30 106.6 0.0 1.8 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) MIT PF04212.18 CCF75628.1 - 6.5e-11 42.1 2.5 6.5e-11 42.1 2.5 1.7 2 0 0 2 2 1 1 MIT (microtubule interacting and transport) domain Vps4_C PF09336.10 CCF75628.1 - 3.5e-09 36.5 0.1 1.5e-08 34.5 0.0 2.1 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain TIP49 PF06068.13 CCF75628.1 - 7.9e-06 25.3 0.0 1.4e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 TIP49 P-loop domain RuvB_N PF05496.12 CCF75628.1 - 9.5e-06 25.4 0.0 3e-05 23.8 0.0 1.7 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 CCF75628.1 - 0.00016 21.9 0.0 0.00041 20.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_18 PF13238.6 CCF75628.1 - 0.0002 21.9 0.1 0.00092 19.8 0.1 2.1 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 CCF75628.1 - 0.00029 20.9 0.0 0.0012 18.9 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_14 PF13173.6 CCF75628.1 - 0.00067 19.7 0.1 0.0036 17.3 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 CCF75628.1 - 0.0011 18.5 0.8 0.015 14.8 0.0 2.7 3 1 0 3 3 3 1 P-loop containing dynein motor region ATPase PF06745.13 CCF75628.1 - 0.0012 18.2 0.1 0.0039 16.6 0.0 1.9 2 1 0 2 2 2 1 KaiC AAA_lid_3 PF17862.1 CCF75628.1 - 0.0015 18.3 0.1 0.004 16.9 0.1 1.7 1 0 0 1 1 1 1 AAA+ lid domain Parvo_NS1 PF01057.17 CCF75628.1 - 0.0017 17.5 0.3 0.004 16.3 0.3 1.5 1 1 0 1 1 1 1 Parvovirus non-structural protein NS1 AAA_22 PF13401.6 CCF75628.1 - 0.0022 18.3 0.3 0.092 13.0 0.0 3.2 3 1 0 4 4 4 1 AAA domain AAA_16 PF13191.6 CCF75628.1 - 0.0026 18.2 0.0 0.015 15.7 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain Mg_chelatase PF01078.21 CCF75628.1 - 0.011 15.1 0.0 0.026 13.9 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 CCF75628.1 - 0.015 15.0 0.1 0.033 13.9 0.1 1.6 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 CCF75628.1 - 0.017 14.9 0.0 0.046 13.5 0.0 1.7 2 0 0 2 2 1 0 IstB-like ATP binding protein DUF2075 PF09848.9 CCF75628.1 - 0.022 14.0 0.0 0.038 13.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 CCF75628.1 - 0.023 14.7 1.6 0.43 10.6 0.0 2.4 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_25 PF13481.6 CCF75628.1 - 0.035 13.7 0.0 0.073 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 CCF75628.1 - 0.038 13.1 0.0 0.073 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) DrrA_P4M PF14860.6 CCF75628.1 - 0.04 13.7 0.6 0.1 12.4 0.6 1.7 1 0 0 1 1 1 0 DrrA phosphatidylinositol 4-phosphate binding domain Sigma54_activat PF00158.26 CCF75628.1 - 0.047 13.4 0.0 0.2 11.3 0.0 2.1 1 1 1 2 2 2 0 Sigma-54 interaction domain AAA_17 PF13207.6 CCF75628.1 - 0.064 13.7 0.1 0.4 11.1 0.0 2.2 2 1 0 2 2 2 0 AAA domain PhoH PF02562.16 CCF75628.1 - 0.088 12.2 0.0 0.23 10.9 0.0 1.6 1 0 0 1 1 1 0 PhoH-like protein TPR_8 PF13181.6 CCF75628.1 - 0.13 12.6 3.8 11 6.5 0.1 3.7 3 0 0 3 3 3 0 Tetratricopeptide repeat DUF5074 PF16819.5 CCF75628.1 - 0.46 10.5 2.8 3 7.9 0.3 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5074) IKI3 PF04762.12 CCF75629.1 - 0.009 14.1 0.0 0.021 12.9 0.0 1.5 1 0 0 1 1 1 1 IKI3 family ANAPC4_WD40 PF12894.7 CCF75629.1 - 0.031 14.6 0.2 3.2 8.1 0.0 3.7 4 0 0 4 4 4 0 Anaphase-promoting complex subunit 4 WD40 domain Pro_isomerase PF00160.21 CCF75630.1 - 1.5e-52 178.1 0.0 1.7e-52 177.9 0.0 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF3980 PF13140.6 CCF75631.1 - 0.026 14.9 0.0 0.049 14.1 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3980) WD40 PF00400.32 CCF75631.1 - 0.034 15.0 5.4 0.062 14.2 0.2 3.0 3 1 0 3 3 3 0 WD domain, G-beta repeat BT1 PF03092.16 CCF75632.1 - 1.9e-47 161.7 17.2 6.8e-31 107.1 4.9 2.0 2 0 0 2 2 2 2 BT1 family Diphthami_syn_2 PF01902.17 CCF75634.1 - 7.6e-43 146.5 0.0 1.7e-42 145.4 0.0 1.5 1 1 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 CCF75634.1 - 0.011 15.3 0.0 0.041 13.4 0.0 2.0 1 1 0 1 1 1 0 Queuosine biosynthesis protein QueC UBA_6 PF18039.1 CCF75634.1 - 0.16 11.9 0.0 0.29 11.1 0.0 1.4 1 0 0 1 1 1 0 UBA-like domain Ribosomal_L7Ae PF01248.26 CCF75635.1 - 4.6e-06 26.3 0.3 8.2e-06 25.5 0.1 1.5 2 0 0 2 2 2 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RNase_P_pop3 PF08228.11 CCF75635.1 - 0.00098 19.2 0.2 0.0013 18.8 0.2 1.3 1 1 0 1 1 1 1 RNase P subunit Pop3 COX6B PF02297.17 CCF75636.1 - 0.0054 16.9 2.7 0.0073 16.5 2.7 1.2 1 0 0 1 1 1 1 Cytochrome oxidase c subunit VIb XPG_I PF00867.18 CCF75637.1 - 1.8e-25 89.1 0.0 6e-25 87.4 0.0 2.0 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 CCF75637.1 - 1.6e-24 86.3 0.0 4.5e-24 84.8 0.0 1.8 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 CCF75637.1 - 8.4e-07 29.5 0.1 1.1e-05 25.9 0.0 2.6 2 0 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold HHH_5 PF14520.6 CCF75637.1 - 0.00017 22.1 0.1 0.00073 20.1 0.0 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain HHH_2 PF12826.7 CCF75637.1 - 0.1 12.7 0.0 0.4 10.8 0.0 2.0 2 0 0 2 2 2 0 Helix-hairpin-helix motif HHH PF00633.23 CCF75637.1 - 0.13 12.2 0.1 0.35 10.8 0.1 1.8 1 0 0 1 1 1 0 Helix-hairpin-helix motif DnaJ PF00226.31 CCF75639.1 - 3.9e-12 46.1 0.8 5.3e-12 45.7 0.8 1.2 1 0 0 1 1 1 1 DnaJ domain zf-CSL PF05207.13 CCF75639.1 - 0.00013 21.6 4.1 0.00029 20.5 4.1 1.6 1 1 0 1 1 1 1 CSL zinc finger FAD_binding_3 PF01494.19 CCF75641.1 - 2.4e-50 171.7 0.0 2.2e-30 106.1 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain Pyr_redox_2 PF07992.14 CCF75641.1 - 0.0032 16.7 0.0 0.014 14.6 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 CCF75641.1 - 0.059 13.9 0.0 3.9 8.1 0.0 2.6 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 CCF75641.1 - 0.083 13.1 0.0 0.25 11.6 0.0 1.8 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 CCF75641.1 - 0.2 11.2 0.0 8.2 5.9 0.0 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase RL11D PF11088.8 CCF75642.1 - 0.034 14.4 0.2 0.065 13.5 0.2 1.5 1 0 0 1 1 1 0 Glycoprotein encoding membrane proteins RL5A and RL6 Capsule_synth PF05159.14 CCF75642.1 - 0.058 12.8 0.0 0.08 12.4 0.0 1.2 1 0 0 1 1 1 0 Capsule polysaccharide biosynthesis protein Aurora-A_bind PF09041.10 CCF75642.1 - 0.061 13.4 0.3 0.44 10.6 0.0 2.4 3 0 0 3 3 3 0 Aurora-A binding DUF4709 PF15821.5 CCF75643.1 - 3 8.2 6.4 1.8 8.9 3.2 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4709) Methyltransf_8 PF05148.15 CCF75644.1 - 3e-72 243.0 0.1 3.4e-72 242.8 0.1 1.0 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_11 PF08241.12 CCF75644.1 - 1.5e-05 25.5 0.0 0.0001 22.9 0.0 2.2 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF75644.1 - 0.00024 21.7 0.0 0.016 15.9 0.0 2.4 1 1 1 2 2 2 1 Methyltransferase domain MTS PF05175.14 CCF75644.1 - 0.00089 18.8 0.0 0.04 13.4 0.0 2.2 1 1 1 2 2 2 1 Methyltransferase small domain Methyltransf_23 PF13489.6 CCF75644.1 - 0.0014 18.4 0.0 0.048 13.5 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF75644.1 - 0.0047 16.7 0.0 2.2 8.1 0.0 2.4 1 1 1 2 2 2 2 Methyltransferase domain Ubie_methyltran PF01209.18 CCF75644.1 - 0.033 13.5 0.0 0.047 13.0 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family AP2 PF00847.20 CCF75645.1 - 9.4e-13 48.2 8.1 4.1e-06 26.9 0.2 2.6 3 0 0 3 3 3 2 AP2 domain Sterile PF03015.19 CCF75646.1 - 0.091 13.0 0.1 1.9 8.7 0.0 2.6 2 0 0 2 2 2 0 Male sterility protein Methyltransf_1N PF02870.15 CCF75646.1 - 0.1 13.4 0.0 0.21 12.4 0.0 1.5 1 0 0 1 1 1 0 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Rep_fac-A_3 PF08661.11 CCF75647.1 - 9.2e-19 67.7 0.0 2e-18 66.6 0.0 1.5 1 0 0 1 1 1 1 Replication factor A protein 3 MCM_bind PF09739.9 CCF75647.1 - 1.2e-06 27.3 0.2 2.3e-06 26.4 0.2 1.4 1 1 0 1 1 1 1 Mini-chromosome maintenance replisome factor AAA PF00004.29 CCF75649.1 - 4.6e-37 127.4 0.0 8.7e-37 126.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 CCF75649.1 - 5e-07 29.6 0.0 1.1e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_lid_3 PF17862.1 CCF75649.1 - 2.1e-06 27.5 0.0 4.9e-06 26.3 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 CCF75649.1 - 6.5e-05 23.2 0.4 0.0054 17.0 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_2 PF07724.14 CCF75649.1 - 0.00023 21.3 0.0 0.0011 19.2 0.0 2.1 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_25 PF13481.6 CCF75649.1 - 0.00043 19.9 1.4 0.33 10.5 0.1 2.3 1 1 0 2 2 2 2 AAA domain AAA_5 PF07728.14 CCF75649.1 - 0.00093 19.2 0.0 0.0046 17.0 0.0 2.3 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF75649.1 - 0.00094 19.6 0.1 0.0083 16.5 0.1 2.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_33 PF13671.6 CCF75649.1 - 0.002 18.3 0.0 0.0058 16.8 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 CCF75649.1 - 0.0025 17.8 0.0 0.0078 16.3 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 CCF75649.1 - 0.0025 18.3 0.2 0.014 15.9 0.0 2.5 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 CCF75649.1 - 0.0038 16.5 0.0 0.01 15.0 0.0 1.7 1 1 0 1 1 1 1 TIP49 P-loop domain MMR_HSR1 PF01926.23 CCF75649.1 - 0.0055 16.8 0.0 0.016 15.3 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 CCF75649.1 - 0.0078 16.7 3.8 0.15 12.5 0.0 3.2 2 1 0 2 2 2 1 ABC transporter AAA_28 PF13521.6 CCF75649.1 - 0.0082 16.4 0.0 0.023 14.9 0.0 1.8 1 1 1 2 2 2 1 AAA domain NACHT PF05729.12 CCF75649.1 - 0.014 15.3 0.2 0.14 12.1 0.0 2.3 2 0 0 2 2 2 0 NACHT domain AAA_24 PF13479.6 CCF75649.1 - 0.014 15.1 0.1 0.049 13.4 0.1 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 CCF75649.1 - 0.019 15.4 0.1 0.019 15.4 0.1 2.4 2 2 0 2 2 2 0 RNA helicase SIS PF01380.22 CCF75649.1 - 0.021 14.7 0.1 0.041 13.7 0.1 1.4 1 0 0 1 1 1 0 SIS domain IstB_IS21 PF01695.17 CCF75649.1 - 0.04 13.7 0.0 0.083 12.6 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein Mg_chelatase PF01078.21 CCF75649.1 - 0.043 13.2 0.0 0.1 11.9 0.0 1.6 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 CCF75649.1 - 0.053 13.5 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MCM PF00493.23 CCF75649.1 - 0.06 12.4 0.0 0.12 11.4 0.0 1.5 1 1 0 1 1 1 0 MCM P-loop domain ATPase_2 PF01637.18 CCF75649.1 - 0.065 13.1 0.3 6.8 6.5 0.0 2.7 1 1 1 2 2 2 0 ATPase domain predominantly from Archaea Cytidylate_kin PF02224.18 CCF75649.1 - 0.098 12.4 0.1 0.7 9.6 0.0 2.2 2 0 0 2 2 2 0 Cytidylate kinase Form_Nir_trans PF01226.17 CCF75650.1 - 3.1e-47 160.9 21.4 3.6e-47 160.7 21.4 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter zf-RING_2 PF13639.6 CCF75651.1 - 4.2e-06 27.0 11.2 1.2e-05 25.5 11.2 1.9 1 0 0 1 1 1 1 Ring finger domain RWD PF05773.22 CCF75651.1 - 0.0012 19.2 0.2 0.12 12.7 0.0 3.1 2 1 0 2 2 2 1 RWD domain FANCL_C PF11793.8 CCF75651.1 - 0.0024 18.0 7.7 0.0077 16.4 7.7 1.9 1 1 0 1 1 1 1 FANCL C-terminal domain zf-ANAPC11 PF12861.7 CCF75651.1 - 0.031 14.3 4.0 0.083 13.0 4.0 1.7 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_2 PF13923.6 CCF75651.1 - 0.067 13.0 10.6 0.19 11.6 10.6 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 CCF75651.1 - 0.073 13.0 12.1 0.23 11.4 12.1 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) HEAT_2 PF13646.6 CCF75651.1 - 0.11 12.9 0.0 2.1 8.8 0.0 2.7 2 1 1 3 3 3 0 HEAT repeats zf-C2H2_6 PF13912.6 CCF75651.1 - 0.15 12.1 4.4 6.4 6.9 1.6 2.8 2 0 0 2 2 2 0 C2H2-type zinc finger zf-rbx1 PF12678.7 CCF75651.1 - 0.64 10.3 14.7 0.63 10.4 12.2 2.2 2 0 0 2 2 2 0 RING-H2 zinc finger domain zf-RING-like PF08746.11 CCF75651.1 - 0.74 10.2 6.4 2.1 8.8 6.4 1.8 1 0 0 1 1 1 0 RING-like domain Zn-ribbon_8 PF09723.10 CCF75651.1 - 0.85 9.8 2.7 2.2 8.5 2.7 1.6 1 0 0 1 1 1 0 Zinc ribbon domain RINGv PF12906.7 CCF75651.1 - 1.2 9.3 14.1 0.26 11.4 9.8 2.1 2 0 0 2 2 2 0 RING-variant domain Zf_RING PF16744.5 CCF75651.1 - 2 8.6 4.9 5.9 7.1 4.9 1.8 1 0 0 1 1 1 0 KIAA1045 RING finger zf-C3HC4_3 PF13920.6 CCF75651.1 - 7.1 6.6 9.4 46 4.0 9.4 2.2 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Bax1-I PF01027.20 CCF75652.1 - 1.2e-27 97.1 29.6 1.4e-27 96.9 29.6 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 PET117 PF15786.5 CCF75652.1 - 0.19 12.0 1.0 0.8 10.0 0.1 2.5 2 0 0 2 2 2 0 PET assembly of cytochrome c oxidase, mitochondrial DUF2070 PF09843.9 CCF75652.1 - 0.38 9.0 21.0 0.48 8.7 21.0 1.2 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DNA_pol_E_B PF04042.16 CCF75653.1 - 2.4e-29 102.2 0.1 4.4e-29 101.3 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B DNA_pol_D_N PF18018.1 CCF75653.1 - 9.4e-29 100.1 0.0 3.9e-28 98.2 0.0 1.9 2 0 0 2 2 2 1 DNA polymerase delta subunit OB-fold domain MOLO1 PF17175.4 CCF75653.1 - 0.027 14.6 0.1 0.11 12.7 0.0 2.0 2 0 0 2 2 2 0 Modulator of levamisole receptor-1 RasGEF PF00617.19 CCF75653.1 - 0.13 12.5 0.2 0.45 10.7 0.1 2.0 3 0 0 3 3 3 0 RasGEF domain ARL2_Bind_BART PF11527.8 CCF75655.1 - 0.098 12.8 1.9 0.2 11.8 0.2 2.4 2 0 0 2 2 2 0 The ARF-like 2 binding protein BART RrnaAD PF00398.20 CCF75656.1 - 1.5e-40 138.9 0.0 1.9e-40 138.6 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase MTS PF05175.14 CCF75656.1 - 0.00011 21.8 0.0 0.0002 20.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_23 PF13489.6 CCF75656.1 - 0.00063 19.6 0.0 0.0009 19.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 CCF75656.1 - 0.0079 16.9 0.0 0.017 15.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF75656.1 - 0.051 13.4 0.0 0.095 12.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain FtsJ PF01728.19 CCF75656.1 - 0.062 13.4 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 FtsJ-like methyltransferase Methyltransf_12 PF08242.12 CCF75656.1 - 0.13 13.0 0.0 0.27 12.0 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain RNase_P_p30 PF01876.16 CCF75657.1 - 1.4e-21 77.0 0.2 1.6e-21 76.8 0.2 1.1 1 0 0 1 1 1 1 RNase P subunit p30 DUF4980 PF16352.5 CCF75657.1 - 0.16 12.0 0.0 0.29 11.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) Fcf2 PF08698.11 CCF75658.1 - 7.7e-13 48.7 0.4 1.4e-12 47.9 0.4 1.3 1 0 0 1 1 1 1 Fcf2 pre-rRNA processing baeRF_family5 PF18846.1 CCF75658.1 - 0.02 15.1 0.4 0.033 14.4 0.4 1.3 1 0 0 1 1 1 0 Bacterial archaeo-eukaryotic release factor family 5 Mito_fiss_Elm1 PF06258.11 CCF75658.1 - 0.074 12.2 0.0 0.086 12.0 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial fission ELM1 Tho2 PF11262.8 CCF75659.1 - 7.1e-35 120.7 3.4 7.1e-35 120.7 3.4 2.2 2 1 0 2 2 2 1 Transcription factor/nuclear export subunit protein 2 THOC2_N PF16134.5 CCF75659.1 - 1.2e-12 47.4 2.5 4.2e-05 22.4 0.2 3.3 3 0 0 3 3 3 3 THO complex subunit 2 N-terminus Thoc2 PF11732.8 CCF75659.1 - 1.6e-05 24.9 0.0 5.6e-05 23.1 0.0 2.0 1 0 0 1 1 1 1 Transcription- and export-related complex subunit DASH_Dam1 PF08653.10 CCF75659.1 - 0.014 15.2 0.4 0.059 13.2 0.4 2.2 1 0 0 1 1 1 0 DASH complex subunit Dam1 Asp PF00026.23 CCF75661.1 - 1.8e-61 208.3 0.4 3.1e-61 207.5 0.4 1.3 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 CCF75661.1 - 1.9e-11 44.5 1.5 4.7e-08 33.5 0.1 2.5 2 1 1 3 3 3 2 Xylanase inhibitor N-terminal Elong-fact-P_C PF09285.11 CCF75662.1 - 9.8e-10 38.0 0.2 2.8e-09 36.6 0.2 1.8 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 CCF75662.1 - 1.6e-05 24.9 1.2 2.5e-05 24.2 0.2 1.9 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain RsgA_N PF16745.5 CCF75662.1 - 0.15 11.8 0.2 7.7 6.3 0.1 2.5 2 0 0 2 2 2 0 RsgA N-terminal domain DUF1955 PF09205.10 CCF75663.1 - 9.2 6.0 12.2 2.1 8.1 1.8 3.5 3 1 1 4 4 4 0 Domain of unknown function (DUF1955) V-SNARE_C PF12352.8 CCF75664.1 - 3.4e-07 30.4 1.1 7.9e-07 29.3 1.1 1.6 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus DUF5089 PF17002.5 CCF75664.1 - 0.0055 16.6 0.1 0.0073 16.2 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5089) Sec20 PF03908.13 CCF75664.1 - 0.036 14.0 0.2 0.048 13.6 0.2 1.2 1 0 0 1 1 1 0 Sec20 Ribosomal_S8e PF01201.22 CCF75665.1 - 1.7e-52 177.3 0.0 2.6e-52 176.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S8e DUF3638 PF12340.8 CCF75667.1 - 1.4e-23 83.4 0.0 2.7e-23 82.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3638) DUF3645 PF12359.8 CCF75667.1 - 1.9e-16 59.1 0.0 5.5e-16 57.7 0.0 1.9 1 0 0 1 1 1 1 Protein of unknown function (DUF3645) Vps62 PF06101.11 CCF75667.1 - 3e-06 25.9 0.0 5.2e-06 25.1 0.0 1.2 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 62 EF-hand_6 PF13405.6 CCF75667.1 - 0.0079 16.0 0.0 3.1 8.0 0.0 3.0 2 0 0 2 2 2 1 EF-hand domain EF-hand_7 PF13499.6 CCF75667.1 - 0.021 15.2 0.0 0.071 13.6 0.0 1.9 1 0 0 1 1 1 0 EF-hand domain pair Cpn60_TCP1 PF00118.24 CCF75669.1 - 5.5e-159 529.9 2.4 6.2e-159 529.7 2.4 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Peripla_BP_1 PF00532.21 CCF75669.1 - 0.084 12.3 0.0 0.86 9.0 0.0 2.1 2 0 0 2 2 2 0 Periplasmic binding proteins and sugar binding domain of LacI family ATP12 PF07542.11 CCF75670.1 - 5e-06 26.6 0.0 9.5e-06 25.7 0.0 1.4 1 0 0 1 1 1 1 ATP12 chaperone protein SIS PF01380.22 CCF75671.1 - 1.3e-24 86.5 1.1 2.7e-11 43.4 0.3 2.5 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 CCF75671.1 - 1.3e-15 57.7 0.0 2.4e-15 56.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 CCF75671.1 - 3.3e-10 39.9 0.0 6.4e-10 39.0 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_4 PF13230.6 CCF75671.1 - 9.8e-05 21.4 0.0 0.00021 20.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferases class-II YjeF_N PF03853.15 CCF75672.1 - 6e-33 114.1 0.0 7.5e-33 113.8 0.0 1.1 1 0 0 1 1 1 1 YjeF-related protein N-terminus LAGLIDADG_2 PF03161.13 CCF75672.1 - 0.093 12.8 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 LAGLIDADG DNA endonuclease family RseA_N PF03872.13 CCF75673.1 - 0.0037 17.7 0.4 0.0063 17.0 0.1 1.5 2 0 0 2 2 2 1 Anti sigma-E protein RseA, N-terminal domain TruD PF01142.18 CCF75674.1 - 2.7e-65 220.8 0.0 3.8e-63 213.7 0.0 2.4 2 1 0 2 2 2 2 tRNA pseudouridine synthase D (TruD) DDE_Tnp_1_assoc PF13808.6 CCF75674.1 - 0.14 12.2 0.0 0.34 11.0 0.0 1.6 1 0 0 1 1 1 0 DDE_Tnp_1-associated Synaptobrevin PF00957.21 CCF75675.1 - 6e-08 32.4 0.2 1.1e-07 31.5 0.2 1.5 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 CCF75675.1 - 5.8e-06 26.3 0.0 1.1e-05 25.4 0.0 1.6 1 1 0 1 1 1 1 Regulated-SNARE-like domain DUF1411 PF07199.11 CCF75675.1 - 0.062 13.0 0.3 0.083 12.5 0.3 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1411) PGM_PMM_I PF02878.16 CCF75676.1 - 6e-13 48.7 0.1 1.9e-08 34.1 0.0 2.5 1 1 1 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_IV PF00408.20 CCF75676.1 - 0.0013 18.8 0.0 0.0027 17.9 0.0 1.4 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain DUF4301 PF14134.6 CCF75676.1 - 0.05 12.4 0.0 0.1 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4301) Proteasome PF00227.26 CCF75677.1 - 2.6e-48 164.0 0.5 3.1e-48 163.8 0.5 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 CCF75677.1 - 9.1e-13 47.6 0.1 1.9e-12 46.6 0.1 1.6 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Lipoprot_C PF08794.10 CCF75677.1 - 0.077 13.0 0.1 0.17 11.8 0.0 1.7 2 0 0 2 2 2 0 Lipoprotein GNA1870 C terminal like Peptidase_M48_N PF16491.5 CCF75678.1 - 8.3e-48 162.7 10.4 8.3e-48 162.7 10.4 2.2 2 0 0 2 2 2 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 CCF75678.1 - 1.2e-35 123.1 0.0 2.1e-35 122.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M1 PF01433.20 CCF75678.1 - 0.023 14.2 0.6 0.023 14.2 0.6 1.6 2 0 0 2 2 2 0 Peptidase family M1 domain DUF4538 PF15061.6 CCF75678.1 - 0.085 12.6 0.5 0.25 11.1 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4538) DUF2170 PF09938.9 CCF75679.1 - 0.015 15.0 0.0 0.05 13.3 0.0 1.8 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2170) DUF5517 PF17639.2 CCF75680.1 - 0.044 14.1 0.0 0.053 13.8 0.0 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5517) FAST_1 PF06743.15 CCF75683.1 - 4.5e-05 23.3 0.4 2.8 8.0 0.0 4.1 2 1 2 4 4 4 3 FAST kinase-like protein, subdomain 1 ATP-cone PF03477.16 CCF75684.1 - 0.013 16.1 1.0 3.9 8.1 0.0 2.3 2 0 0 2 2 2 0 ATP cone domain Rep_fac_C PF08542.11 CCF75684.1 - 0.033 14.6 0.7 0.12 12.8 0.0 2.0 2 0 0 2 2 2 0 Replication factor C C-terminal domain Cep57_CLD_2 PF14197.6 CCF75684.1 - 0.12 12.5 3.4 0.11 12.6 1.5 1.9 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Syntaxin_2 PF14523.6 CCF75684.1 - 0.22 11.9 3.6 4.1 7.8 0.5 2.5 3 0 0 3 3 3 0 Syntaxin-like protein DER1 PF04511.15 CCF75685.1 - 4.5e-23 82.2 5.3 2.1e-12 47.4 0.3 2.2 2 0 0 2 2 2 2 Der1-like family DUF4625 PF15418.6 CCF75686.1 - 0.0074 16.5 0.2 16 5.8 0.3 3.6 2 1 0 2 2 2 2 Domain of unknown function (DUF4625) Peptidase_Mx PF15887.5 CCF75686.1 - 0.03 13.7 0.1 0.063 12.7 0.1 1.5 1 0 0 1 1 1 0 Putative zinc-binding metallo-peptidase Cgr1 PF03879.14 CCF75687.1 - 1.2e-09 38.5 15.5 1.5e-09 38.2 15.5 1.1 1 0 0 1 1 1 1 Cgr1 family DUF3585 PF12130.8 CCF75687.1 - 0.0096 16.1 9.7 0.012 15.8 9.7 1.2 1 0 0 1 1 1 1 Bivalent Mical/EHBP Rab binding domain PAP_assoc PF03828.19 CCF75687.1 - 6 7.2 5.0 1.3e+02 2.8 5.0 2.6 1 1 0 1 1 1 0 Cid1 family poly A polymerase RRM_1 PF00076.22 CCF75688.1 - 1.5e-41 140.1 12.4 1.9e-13 50.0 0.2 5.4 4 1 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF75688.1 - 0.00035 20.6 0.1 1.4 9.1 0.0 3.9 3 1 0 3 3 3 2 RNA recognition motif Limkain-b1 PF11608.8 CCF75688.1 - 0.00095 19.2 1.4 2.6 8.2 0.2 4.1 3 2 1 4 4 4 1 Limkain b1 RRM_occluded PF16842.5 CCF75688.1 - 0.0012 18.6 1.1 7.5 6.5 0.0 4.2 4 0 0 4 4 4 2 Occluded RNA-recognition motif DASH_Spc34 PF08657.10 CCF75688.1 - 0.0019 18.1 1.6 0.038 13.8 0.7 2.3 2 0 0 2 2 2 1 DASH complex subunit Spc34 RRM_5 PF13893.6 CCF75688.1 - 0.0023 17.5 0.1 4.7 6.8 0.0 4.0 4 0 0 4 4 4 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_Rrp7 PF17799.1 CCF75688.1 - 0.79 9.5 11.3 6 6.6 0.0 4.9 5 1 1 6 6 6 0 Rrp7 RRM-like N-terminal domain EF-hand_4 PF12763.7 CCF75689.1 - 1.7e-17 63.3 0.1 8.4e-08 32.1 0.0 2.8 2 0 0 2 2 2 2 Cytoskeletal-regulatory complex EF hand EF-hand_7 PF13499.6 CCF75689.1 - 1.2e-08 35.3 0.6 1.2e-06 28.9 0.6 2.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 CCF75689.1 - 1.2e-06 27.6 0.5 0.025 14.1 0.0 3.6 3 0 0 3 3 3 2 EF hand EF-hand_6 PF13405.6 CCF75689.1 - 9.2e-06 25.2 0.6 0.43 10.6 0.1 3.6 3 0 0 3 3 3 2 EF-hand domain EF-hand_8 PF13833.6 CCF75689.1 - 0.00022 21.0 0.6 0.097 12.5 0.4 3.6 3 1 1 4 4 4 1 EF-hand domain pair EF-hand_5 PF13202.6 CCF75689.1 - 0.0052 16.2 1.0 0.38 10.3 0.0 2.6 2 0 0 2 2 2 1 EF hand Cupin_8 PF13621.6 CCF75690.1 - 3.4e-25 89.2 0.1 4.7e-25 88.8 0.1 1.1 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 CCF75690.1 - 8.4e-05 22.2 0.0 0.00019 21.0 0.0 1.5 1 1 0 1 1 1 1 Cupin superfamily protein Cupin_2 PF07883.11 CCF75690.1 - 0.0039 16.9 0.0 0.0089 15.7 0.0 1.5 1 0 0 1 1 1 1 Cupin domain DAGK_acc PF00609.19 CCF75692.1 - 2.3e-32 112.5 0.1 6.3e-32 111.1 0.0 1.8 2 0 0 2 2 2 1 Diacylglycerol kinase accessory domain TMEM43 PF07787.12 CCF75692.1 - 3.2e-16 59.5 0.0 6.4e-16 58.5 0.0 1.4 1 0 0 1 1 1 1 Transmembrane protein 43 DAGK_cat PF00781.24 CCF75692.1 - 7.8e-14 51.4 0.0 1.6e-13 50.4 0.0 1.5 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 CCF75692.1 - 0.043 13.0 0.0 0.078 12.2 0.0 1.4 1 0 0 1 1 1 0 ATP-NAD kinase TPR_14 PF13428.6 CCF75693.1 - 1.2e-22 78.6 15.8 0.034 15.0 0.0 12.0 8 3 5 13 13 12 5 Tetratricopeptide repeat HAT PF02184.16 CCF75693.1 - 5.2e-16 58.3 49.5 0.015 15.3 0.1 13.2 12 1 0 12 12 12 6 HAT (Half-A-TPR) repeat TPR_19 PF14559.6 CCF75693.1 - 7.2e-16 58.5 0.1 0.039 14.5 0.0 7.6 6 1 2 8 8 8 2 Tetratricopeptide repeat Suf PF05843.14 CCF75693.1 - 1.1e-15 58.4 25.7 0.0038 17.2 1.1 6.8 3 2 3 6 6 6 5 Suppressor of forked protein (Suf) TPR_15 PF13429.6 CCF75693.1 - 4.1e-07 29.5 5.3 0.035 13.3 1.8 4.2 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 CCF75693.1 - 8e-06 25.6 23.1 3.2 8.1 0.1 9.8 10 1 0 11 11 10 2 Tetratricopeptide repeat TPR_16 PF13432.6 CCF75693.1 - 1.5e-05 25.5 5.7 0.17 12.5 0.0 6.4 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_8 PF13181.6 CCF75693.1 - 6.3e-05 22.9 11.2 0.59 10.5 0.0 8.1 8 0 0 8 8 8 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 CCF75693.1 - 0.00052 20.0 26.3 0.08 12.9 0.2 7.1 7 2 1 8 8 8 3 Mad3/BUB1 homology region 1 TPR_7 PF13176.6 CCF75693.1 - 0.00058 19.7 1.9 8.4 6.7 0.0 5.4 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 CCF75693.1 - 0.0049 17.4 13.2 64 4.5 0.0 7.9 9 0 0 9 9 8 0 Tetratricopeptide repeat TPR_9 PF13371.6 CCF75693.1 - 0.0056 16.8 0.1 4.5 7.5 0.0 4.0 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_17 PF13431.6 CCF75693.1 - 0.015 15.7 8.9 5.3 7.7 0.0 6.4 8 0 0 8 8 5 0 Tetratricopeptide repeat TPR_12 PF13424.6 CCF75693.1 - 0.015 15.5 13.2 7.6 6.9 0.0 6.6 7 1 0 7 7 6 0 Tetratricopeptide repeat PBP_GOBP PF01395.22 CCF75693.1 - 0.073 13.2 0.1 0.24 11.6 0.1 1.9 1 0 0 1 1 1 0 PBP/GOBP family DUF1563 PF07599.11 CCF75693.1 - 0.1 12.7 0.3 2.5 8.2 0.1 3.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1563) NRDE-2 PF08424.10 CCF75693.1 - 0.14 11.2 14.8 0.67 9.0 0.1 4.8 4 3 1 5 5 5 0 NRDE-2, necessary for RNA interference TPR_1 PF00515.28 CCF75693.1 - 0.17 11.7 3.8 19 5.3 0.0 5.0 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_10 PF13374.6 CCF75693.1 - 3.1 7.8 14.6 9.7 6.2 0.2 6.3 6 0 0 6 6 6 0 Tetratricopeptide repeat AP2 PF00847.20 CCF75694.1 - 4.5e-10 39.6 0.1 1.4e-09 38.0 0.1 1.9 2 0 0 2 2 2 1 AP2 domain WH1 PF00568.23 CCF75696.1 - 0.09 12.7 0.0 0.16 11.9 0.0 1.4 1 0 0 1 1 1 0 WH1 domain Golgin_A5 PF09787.9 CCF75697.1 - 0.063 12.7 0.1 0.26 10.7 0.0 2.0 2 0 0 2 2 2 0 Golgin subfamily A member 5 Phage_int_SAM_5 PF13102.6 CCF75697.1 - 0.47 10.8 0.0 0.47 10.8 0.0 4.0 5 0 0 5 5 5 0 Phage integrase SAM-like domain Cons_hypoth95 PF03602.15 CCF75698.1 - 4.6e-17 62.2 0.2 5.7e-15 55.4 0.0 2.6 1 1 1 2 2 2 2 Conserved hypothetical protein 95 PrmA PF06325.13 CCF75698.1 - 0.012 15.0 0.0 0.018 14.5 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 CCF75698.1 - 0.02 15.6 0.0 0.037 14.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MTS PF05175.14 CCF75698.1 - 0.041 13.4 0.0 0.063 12.8 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain UPF0020 PF01170.18 CCF75698.1 - 0.16 11.6 0.4 1.3 8.7 0.4 2.0 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 Mannosyl_trans2 PF04188.13 CCF75699.1 - 5.6e-22 78.7 18.9 5.6e-22 78.7 18.9 1.7 1 1 0 1 1 1 1 Mannosyltransferase (PIG-V) RRM_1 PF00076.22 CCF75700.1 - 7.9e-19 67.3 0.0 1.2e-18 66.7 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF75700.1 - 0.00018 21.1 0.0 0.00018 21.1 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF75700.1 - 0.025 14.5 0.0 0.047 13.6 0.0 1.4 2 0 0 2 2 2 0 Occluded RNA-recognition motif RRM_3 PF08777.11 CCF75700.1 - 0.12 12.4 0.0 0.15 12.1 0.0 1.2 1 0 0 1 1 1 0 RNA binding motif Skp1 PF01466.19 CCF75701.1 - 3.6e-18 65.4 0.0 6.8e-18 64.5 0.0 1.5 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 CCF75701.1 - 7.4e-15 54.9 0.2 1.3e-14 54.1 0.2 1.4 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain DUF812 PF05667.11 CCF75704.1 - 0.0018 17.3 10.6 0.002 17.1 10.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF812) MbeD_MobD PF04899.12 CCF75704.1 - 0.021 14.9 4.2 2.4 8.3 0.4 2.3 1 1 0 2 2 2 0 MbeD/MobD like FlxA PF14282.6 CCF75704.1 - 0.026 14.5 12.5 0.026 14.5 12.5 2.6 1 1 1 2 2 2 0 FlxA-like protein Lipoprotein_6 PF01441.19 CCF75704.1 - 0.035 14.1 3.0 0.045 13.8 3.0 1.1 1 0 0 1 1 1 0 Lipoprotein Spc7 PF08317.11 CCF75704.1 - 0.041 12.8 11.1 0.19 10.6 11.1 1.8 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF4795 PF16043.5 CCF75704.1 - 0.042 13.5 8.8 0.063 12.9 8.8 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4795) Syntaxin-6_N PF09177.11 CCF75704.1 - 0.051 14.1 4.6 0.71 10.5 4.6 2.1 1 1 0 1 1 1 0 Syntaxin 6, N-terminal CENP-F_leu_zip PF10473.9 CCF75704.1 - 0.057 13.5 10.9 0.1 12.6 10.9 1.4 1 1 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Med30 PF11315.8 CCF75704.1 - 0.059 13.6 8.3 0.07 13.3 8.3 1.0 1 0 0 1 1 1 0 Mediator complex subunit 30 CCDC-167 PF15188.6 CCF75704.1 - 0.061 13.7 6.7 0.49 10.8 6.7 2.0 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 ABC_tran_Xtn PF12848.7 CCF75704.1 - 0.063 13.3 7.5 0.057 13.5 6.5 1.5 1 1 0 1 1 1 0 ABC transporter DUF1192 PF06698.11 CCF75704.1 - 0.063 13.3 0.4 0.063 13.3 0.4 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF1192) TMF_TATA_bd PF12325.8 CCF75704.1 - 0.086 13.1 5.5 0.18 12.1 4.7 1.9 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF724 PF05266.14 CCF75704.1 - 0.095 12.5 7.2 0.12 12.2 7.2 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF724) Baculo_PEP_C PF04513.12 CCF75704.1 - 0.097 12.7 5.9 0.17 12.0 5.9 1.4 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus BRE1 PF08647.11 CCF75704.1 - 0.11 12.6 11.5 0.067 13.3 9.1 1.7 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase ABC_tran_CTD PF16326.5 CCF75704.1 - 0.12 12.7 7.9 1.6 9.0 0.8 2.3 1 1 1 2 2 2 0 ABC transporter C-terminal domain COG5 PF10392.9 CCF75704.1 - 0.14 12.4 8.5 0.37 11.0 0.7 2.3 1 1 1 2 2 2 0 Golgi transport complex subunit 5 Atg14 PF10186.9 CCF75704.1 - 0.15 11.1 10.2 0.29 10.2 10.2 1.4 1 1 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 LPP PF04728.13 CCF75704.1 - 0.17 12.3 6.6 0.56 10.6 0.3 2.4 2 0 0 2 2 2 0 Lipoprotein leucine-zipper GAS PF13851.6 CCF75704.1 - 0.17 11.2 13.3 0.2 11.0 13.3 1.0 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Vac_Fusion PF02346.16 CCF75704.1 - 0.21 11.2 4.7 9.5 5.9 0.3 2.9 2 1 1 3 3 3 0 Chordopoxvirus multifunctional envelope protein A27 AAA_32 PF13654.6 CCF75704.1 - 0.22 10.3 6.9 0.27 10.0 6.9 1.0 1 0 0 1 1 1 0 AAA domain FapA PF03961.13 CCF75704.1 - 0.25 9.9 9.2 0.33 9.5 9.2 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A HrpB7 PF09486.10 CCF75704.1 - 0.26 11.7 1.8 0.65 10.4 0.7 1.9 1 1 1 2 2 2 0 Bacterial type III secretion protein (HrpB7) CLZ PF16526.5 CCF75704.1 - 0.28 11.6 7.6 0.1 13.0 1.4 2.2 2 0 0 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels ATG16 PF08614.11 CCF75704.1 - 0.28 11.4 8.4 0.45 10.7 3.0 2.0 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Herpes_UL6 PF01763.16 CCF75704.1 - 0.35 9.4 6.5 0.35 9.3 5.1 1.5 1 1 1 2 2 2 0 Herpesvirus UL6 like DUF4140 PF13600.6 CCF75704.1 - 0.41 11.1 4.6 1.1 9.8 0.8 2.2 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) NPV_P10 PF05531.12 CCF75704.1 - 0.46 11.0 8.1 28 5.3 8.1 2.3 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DASH_Dam1 PF08653.10 CCF75704.1 - 0.61 9.9 3.5 1.5 8.6 0.2 2.5 1 1 3 4 4 4 0 DASH complex subunit Dam1 CEP209_CC5 PF16574.5 CCF75704.1 - 0.62 10.2 8.5 0.38 10.9 0.9 2.0 1 1 1 2 2 2 0 Coiled-coil region of centrosome protein CE290 YlqD PF11068.8 CCF75704.1 - 0.66 10.3 15.3 3.5 8.0 15.3 1.8 1 1 0 1 1 1 0 YlqD protein DUF1664 PF07889.12 CCF75704.1 - 0.67 10.0 7.4 1.8 8.6 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) TolA_bind_tri PF16331.5 CCF75704.1 - 0.78 9.9 13.3 0.21 11.7 6.0 2.4 1 1 1 2 2 2 0 TolA binding protein trimerisation DUF3573 PF12097.8 CCF75704.1 - 0.78 8.5 4.3 0.96 8.2 4.3 1.2 1 1 0 1 1 1 0 Protein of unknown function (DUF3573) TMPIT PF07851.13 CCF75704.1 - 0.79 8.9 6.3 1.1 8.4 6.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein ADIP PF11559.8 CCF75704.1 - 0.8 9.8 12.2 4.6 7.3 12.0 1.9 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding Fib_alpha PF08702.10 CCF75704.1 - 0.84 9.8 12.5 0.28 11.4 4.8 2.1 1 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Jnk-SapK_ap_N PF09744.9 CCF75704.1 - 0.9 9.7 10.1 3.7 7.8 10.1 1.8 1 1 0 1 1 1 0 JNK_SAPK-associated protein-1 DHR10 PF18595.1 CCF75704.1 - 0.92 9.6 12.2 1.4 9.0 7.4 2.1 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Exonuc_VII_L PF02601.15 CCF75704.1 - 0.95 9.0 6.5 1.1 8.8 6.5 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit DASH_Dad2 PF08654.10 CCF75704.1 - 1.1 9.7 7.3 2.3 8.7 1.1 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad2 FliJ PF02050.16 CCF75704.1 - 1.3 9.2 12.8 1.4 9.2 6.2 2.1 1 1 1 2 2 2 0 Flagellar FliJ protein YabA PF06156.13 CCF75704.1 - 1.4 9.6 9.2 2.4 8.9 5.6 2.1 1 1 1 2 2 2 0 Initiation control protein YabA Swi5 PF07061.11 CCF75704.1 - 1.4 9.0 10.2 31 4.8 10.2 2.3 1 1 0 1 1 1 0 Swi5 DUF4446 PF14584.6 CCF75704.1 - 1.5 8.8 5.3 0.82 9.7 1.4 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4446) APG6_N PF17675.1 CCF75704.1 - 1.6 9.2 11.2 5.5 7.5 11.2 1.7 1 1 0 1 1 1 0 Apg6 coiled-coil region DUF4349 PF14257.6 CCF75704.1 - 1.9 7.9 6.3 0.65 9.4 0.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4349) KELK PF15796.5 CCF75704.1 - 1.9 9.0 11.3 3 8.4 4.4 2.4 1 1 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF2935 PF11155.8 CCF75704.1 - 2.5 8.5 7.2 5.2 7.4 1.8 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) FlaC_arch PF05377.11 CCF75704.1 - 2.5 8.6 6.7 5.4 7.5 2.5 2.7 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) DUF5082 PF16888.5 CCF75704.1 - 2.7 8.3 12.0 1.8 8.8 7.5 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) BLOC1_2 PF10046.9 CCF75704.1 - 2.8 8.3 9.9 1 9.7 2.3 2.3 1 1 1 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 SlyX PF04102.12 CCF75704.1 - 4.1 8.1 11.4 1.9 9.2 5.1 2.6 1 1 1 2 2 2 0 SlyX DUF2968 PF11180.8 CCF75704.1 - 4.4 6.9 10.2 7.4 6.2 10.2 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2968) Spc24 PF08286.11 CCF75704.1 - 4.6 7.5 9.6 10 6.5 4.4 2.5 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 SseC PF04888.12 CCF75704.1 - 4.7 6.7 8.1 1.1 8.8 0.9 2.3 1 1 1 2 2 2 0 Secretion system effector C (SseC) like family FliD_N PF02465.18 CCF75704.1 - 4.7 8.0 8.1 82 4.0 8.1 2.1 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 N-terminus DUF16 PF01519.16 CCF75704.1 - 5 7.7 11.7 2.6 8.6 7.4 2.0 1 1 1 2 2 2 0 Protein of unknown function DUF16 DASH_Hsk3 PF08227.11 CCF75704.1 - 7.5 7.0 10.6 8.8 6.8 1.1 2.6 2 0 0 2 2 2 0 DASH complex subunit Hsk3 like Ribosomal_L24e PF01246.20 CCF75705.1 - 1.5e-30 105.2 4.4 1.5e-30 105.2 4.4 1.8 2 0 0 2 2 2 1 Ribosomal protein L24e zf-FCS PF06467.14 CCF75705.1 - 0.0097 15.8 1.7 0.021 14.8 1.7 1.6 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-C3HC4_5 PF17121.5 CCF75705.1 - 0.021 14.7 1.0 0.034 14.0 1.0 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) tRNA-synt_2b PF00587.25 CCF75706.1 - 7e-41 140.1 0.1 1.1e-40 139.5 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 CCF75706.1 - 2.4e-13 50.2 3.3 5.3e-13 49.1 3.3 1.6 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain tRNA-synt_2 PF00152.20 CCF75706.1 - 0.089 11.9 0.0 0.17 11.0 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class II (D, K and N) CENP-K PF11802.8 CCF75706.1 - 0.36 10.4 3.5 0.093 12.3 0.4 1.5 2 0 0 2 2 2 0 Centromere-associated protein K IMPDH PF00478.25 CCF75707.1 - 9.5e-115 383.3 0.8 1.1e-114 383.0 0.8 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 CCF75707.1 - 6.3e-13 49.0 0.1 4.9e-05 23.7 0.0 2.8 2 0 0 2 2 2 2 CBS domain NMO PF03060.15 CCF75707.1 - 2.4e-10 40.4 2.7 8.2e-05 22.1 0.0 2.7 2 1 0 2 2 2 2 Nitronate monooxygenase FMN_dh PF01070.18 CCF75707.1 - 4e-06 26.1 0.5 4.8e-05 22.6 0.1 2.3 2 0 0 2 2 2 1 FMN-dependent dehydrogenase B12-binding PF02310.19 CCF75707.1 - 0.0063 16.5 0.0 0.02 14.9 0.0 1.8 1 0 0 1 1 1 1 B12 binding domain His_biosynth PF00977.21 CCF75707.1 - 0.0069 15.9 1.3 0.027 14.0 0.4 2.3 2 1 0 2 2 2 1 Histidine biosynthesis protein ThiG PF05690.14 CCF75707.1 - 0.041 13.2 0.6 0.23 10.8 0.6 2.2 1 1 0 1 1 1 0 Thiazole biosynthesis protein ThiG QRPTase_C PF01729.19 CCF75707.1 - 0.043 13.6 0.0 0.079 12.7 0.0 1.4 1 0 0 1 1 1 0 Quinolinate phosphoribosyl transferase, C-terminal domain NanE PF04131.14 CCF75707.1 - 0.068 12.4 1.0 0.23 10.6 0.3 2.3 2 1 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase RTC PF01137.21 CCF75708.1 - 2.4e-14 53.1 0.0 7e-14 51.5 0.0 1.7 1 1 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 CCF75708.1 - 1.1e-07 32.3 0.0 1.6e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain HTH_10 PF04967.12 CCF75708.1 - 0.17 11.7 0.0 0.33 10.8 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Pro_isomerase PF00160.21 CCF75709.1 - 7.7e-38 130.3 0.2 1.9e-37 129.0 0.0 1.7 2 0 0 2 2 2 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SYF2 PF08231.12 CCF75709.1 - 5.7e-30 104.8 11.1 5.7e-30 104.8 11.1 2.2 2 0 0 2 2 2 1 SYF2 splicing factor Tubulin PF00091.25 CCF75710.1 - 9.8e-61 205.4 0.2 4.2e-60 203.3 0.0 1.9 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 CCF75710.1 - 1.3e-24 86.7 0.0 2.7e-24 85.7 0.0 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Metallophos PF00149.28 CCF75711.1 - 2.8e-35 122.7 0.3 2.8e-35 122.7 0.3 1.9 3 0 0 3 3 3 1 Calcineurin-like phosphoesterase zf-HIT PF04438.16 CCF75712.1 - 2.1e-05 24.3 13.9 5.3e-05 23.0 13.9 1.7 1 0 0 1 1 1 1 HIT zinc finger Guanylate_cyc PF00211.20 CCF75713.1 - 1.5e-09 37.7 0.0 0.00018 21.2 0.0 2.4 2 0 0 2 2 2 2 Adenylate and Guanylate cyclase catalytic domain DNA_pol_phi PF04931.13 CCF75714.1 - 2.7e-10 39.1 0.3 7.3e-10 37.6 0.0 1.9 3 0 0 3 3 3 1 DNA polymerase phi IL34 PF15036.6 CCF75714.1 - 0.031 14.3 0.5 0.095 12.7 0.5 1.8 1 0 0 1 1 1 0 Interleukin 34 DUF1966 PF09260.11 CCF75715.1 - 0.091 13.0 0.0 0.13 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1966) DEAD PF00270.29 CCF75717.1 - 1.7e-32 112.6 0.1 1.8e-31 109.3 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF75717.1 - 4.1e-26 91.5 0.1 3.3e-25 88.6 0.0 2.3 2 1 1 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF75717.1 - 0.0019 18.2 0.0 0.0043 17.1 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C_2 PF13307.6 CCF75717.1 - 0.028 14.6 0.0 0.05 13.8 0.0 1.3 1 0 0 1 1 1 0 Helicase C-terminal domain Sigma70_r1_1 PF03979.14 CCF75717.1 - 0.086 12.9 0.2 14 5.8 0.0 3.1 3 0 0 3 3 3 0 Sigma-70 factor, region 1.1 tRNA-synt_1b PF00579.25 CCF75717.1 - 0.17 11.2 0.0 1.9 7.7 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) FAD_binding_2 PF00890.24 CCF75718.1 - 4.6e-117 391.6 0.2 5.7e-117 391.3 0.2 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 CCF75718.1 - 2e-42 144.2 0.5 2.9e-42 143.7 0.5 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 CCF75718.1 - 3.7e-05 23.1 0.4 0.0026 17.1 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 CCF75718.1 - 0.0038 16.5 0.1 0.0056 16.0 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain GIDA PF01134.22 CCF75718.1 - 0.022 13.8 0.4 0.048 12.7 0.4 1.5 1 0 0 1 1 1 0 Glucose inhibited division protein A Thi4 PF01946.17 CCF75718.1 - 0.033 13.4 0.2 6.2 6.0 0.0 2.3 2 0 0 2 2 2 0 Thi4 family Ribosomal_L27 PF01016.19 CCF75719.1 - 4.1e-22 78.0 0.1 5.1e-22 77.7 0.1 1.1 1 0 0 1 1 1 1 Ribosomal L27 protein RRN3 PF05327.11 CCF75721.1 - 3e-23 82.2 16.3 6.9e-16 57.9 2.6 3.1 1 1 1 3 3 3 3 RNA polymerase I specific transcription initiation factor RRN3 DUF3223 PF11523.8 CCF75721.1 - 0.00013 22.8 0.0 0.00027 21.7 0.0 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) AMMECR1 PF01871.17 CCF75722.1 - 1.3e-37 129.0 0.0 1.5e-37 128.8 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 Thioredoxin PF00085.20 CCF75724.1 - 2.1e-05 24.4 0.0 3.5e-05 23.7 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 CCF75724.1 - 0.00073 19.0 0.0 0.0008 18.9 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family GP120 PF00516.18 CCF75724.1 - 0.011 14.4 0.0 0.013 14.1 0.0 1.1 1 0 0 1 1 1 0 Envelope glycoprotein GP120 EF_TS PF00889.19 CCF75725.1 - 1.4e-29 103.2 1.1 6.2e-27 94.6 1.1 2.1 1 1 0 1 1 1 1 Elongation factor TS NapD PF03927.13 CCF75725.1 - 0.1 12.7 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 NapD protein UBA PF00627.31 CCF75725.1 - 0.17 11.8 0.0 0.33 10.9 0.0 1.5 1 0 0 1 1 1 0 UBA/TS-N domain Sec1 PF00995.23 CCF75726.1 - 3.2e-82 277.6 3.4 3.7e-82 277.4 3.4 1.0 1 0 0 1 1 1 1 Sec1 family Ribosomal_S3Ae PF01015.18 CCF75726.1 - 0.068 12.7 0.0 0.13 11.8 0.0 1.4 1 0 0 1 1 1 0 Ribosomal S3Ae family TruB_N PF01509.18 CCF75728.1 - 3.2e-42 144.4 0.0 4.5e-42 143.9 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 CCF75728.1 - 6.6e-07 29.4 0.0 2.3e-06 27.7 0.1 1.8 2 0 0 2 2 2 1 tRNA pseudouridylate synthase B C-terminal domain EF-hand_7 PF13499.6 CCF75729.1 - 2.4e-05 24.7 1.2 0.002 18.5 0.3 2.7 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 CCF75729.1 - 9.4e-05 21.7 0.8 0.00023 20.5 0.0 2.1 2 0 0 2 2 2 1 EF hand EF-hand_6 PF13405.6 CCF75729.1 - 0.00014 21.5 1.0 0.00048 19.8 0.1 2.4 2 0 0 2 2 2 1 EF-hand domain EF-hand_8 PF13833.6 CCF75729.1 - 0.0003 20.6 0.1 0.45 10.4 0.0 3.1 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_5 PF13202.6 CCF75729.1 - 0.00077 18.8 0.0 0.0018 17.7 0.0 1.6 1 0 0 1 1 1 1 EF hand Pkinase PF00069.25 CCF75730.1 - 3.8e-58 196.9 0.0 4.8e-58 196.6 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75730.1 - 1.3e-27 96.7 0.0 1.8e-27 96.2 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF75730.1 - 0.0014 18.0 0.0 0.0033 16.8 0.0 1.5 1 1 0 1 1 1 1 Kinase-like YrbL-PhoP_reg PF10707.9 CCF75730.1 - 0.2 11.2 0.4 0.51 9.8 0.0 1.8 2 0 0 2 2 2 0 PhoP regulatory network protein YrbL RRM_1 PF00076.22 CCF75731.1 - 6.7e-26 89.9 0.1 2.7e-13 49.5 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 CCF75731.1 - 8.3e-05 22.2 0.0 0.019 14.6 0.1 2.5 1 1 2 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF75731.1 - 0.013 15.3 0.0 0.049 13.5 0.0 1.8 2 0 0 2 2 2 0 Occluded RNA-recognition motif DUF4523 PF15023.6 CCF75731.1 - 0.04 13.7 0.0 0.059 13.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF4523) SpvD PF05563.12 CCF75731.1 - 0.044 13.4 0.0 0.059 13.0 0.0 1.2 1 0 0 1 1 1 0 Salmonella plasmid virulence protein SpvD Med7 PF05983.11 CCF75731.1 - 0.12 12.4 0.1 0.18 11.9 0.1 1.2 1 0 0 1 1 1 0 MED7 protein DUF1242 PF06842.12 CCF75732.1 - 1.9e-11 43.5 0.7 3.4e-11 42.8 0.7 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1242) PCI PF01399.27 CCF75733.1 - 3.2e-14 53.3 3.1 5.1e-14 52.7 1.6 2.2 2 0 0 2 2 2 1 PCI domain ANAPC3 PF12895.7 CCF75733.1 - 0.041 14.1 0.7 0.19 12.0 0.5 2.1 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_2 PF07719.17 CCF75733.1 - 0.47 10.7 3.6 0.4 10.9 0.1 2.6 3 0 0 3 3 3 0 Tetratricopeptide repeat RRM_1 PF00076.22 CCF75734.1 - 8.3e-40 134.5 0.0 1.6e-20 72.7 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 CCF75734.1 - 0.00026 21.0 0.1 0.039 14.1 0.0 2.5 2 1 0 2 2 2 1 RNA recognition motif OB_RNB PF08206.11 CCF75734.1 - 0.0008 19.0 0.4 1.3 8.8 0.1 2.4 2 0 0 2 2 2 2 Ribonuclease B OB domain PHM7_cyt PF14703.6 CCF75734.1 - 0.0014 18.8 0.0 0.05 13.8 0.0 2.2 2 0 0 2 2 2 1 Cytosolic domain of 10TM putative phosphate transporter RRM_5 PF13893.6 CCF75734.1 - 0.013 15.1 0.0 0.33 10.6 0.0 2.1 1 1 1 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) UDG PF03167.19 CCF75735.1 - 2.2e-22 79.7 0.0 3.1e-22 79.2 0.0 1.2 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily YTH PF04146.15 CCF75736.1 - 5.1e-28 98.1 0.1 6.7e-27 94.5 0.1 2.2 1 1 0 1 1 1 1 YT521-B-like domain zf_CCCH_4 PF18345.1 CCF75736.1 - 0.00033 20.6 2.8 0.00033 20.6 2.8 2.2 3 0 0 3 3 3 1 Zinc finger domain Torus PF16131.5 CCF75736.1 - 0.00041 21.0 0.6 0.00098 19.8 0.3 1.8 1 1 0 1 1 1 1 Torus domain zf-CCCH_4 PF18044.1 CCF75736.1 - 0.01 15.6 0.8 0.01 15.6 0.8 2.1 2 0 0 2 2 2 0 CCCH-type zinc finger UMP1 PF05348.11 CCF75737.1 - 5.8e-07 29.8 0.0 6.9e-07 29.5 0.0 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 Ribosomal_60s PF00428.19 CCF75738.1 - 3.3e-20 72.5 3.0 4.5e-20 72.0 3.0 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein Pkinase PF00069.25 CCF75739.1 - 7e-30 104.3 0.0 1.1e-28 100.3 0.0 1.9 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75739.1 - 1.3e-19 70.5 0.0 2.4e-19 69.6 0.0 1.3 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF75739.1 - 0.02 14.2 0.0 0.066 12.5 0.0 1.9 1 1 0 1 1 1 0 Kinase-like DSPc PF00782.20 CCF75741.1 - 4.6e-14 52.4 0.1 8.3e-14 51.5 0.1 1.5 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain N2227 PF07942.12 CCF75742.1 - 1.8e-88 296.3 0.0 3e-88 295.5 0.0 1.3 1 0 0 1 1 1 1 N2227-like protein FAST_1 PF06743.15 CCF75743.1 - 0.11 12.4 2.4 0.28 11.1 0.2 2.8 3 0 0 3 3 3 0 FAST kinase-like protein, subdomain 1 DcpS_C PF11969.8 CCF75744.1 - 7e-11 42.6 0.1 1.6e-10 41.4 0.1 1.6 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding Ribosomal_L9_N PF01281.19 CCF75744.1 - 1.5e-08 34.1 0.0 3.2e-08 33.0 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Ribosomal_L13 PF00572.18 CCF75745.1 - 3.6e-07 30.5 0.0 4.4e-05 23.7 0.0 2.5 2 1 0 2 2 2 1 Ribosomal protein L13 PI3_PI4_kinase PF00454.27 CCF75747.1 - 1.9e-31 109.8 0.0 3e-31 109.1 0.0 1.2 1 0 0 1 1 1 1 Phosphatidylinositol 3- and 4-kinase FATC PF02260.20 CCF75747.1 - 6.5e-07 29.1 0.1 1.2e-06 28.2 0.1 1.5 1 0 0 1 1 1 1 FATC domain TPR_5 PF12688.7 CCF75747.1 - 0.0097 16.1 0.1 0.039 14.2 0.1 2.0 1 0 0 1 1 1 1 Tetratrico peptide repeat ANAPC4_WD40 PF12894.7 CCF75748.1 - 9e-07 29.1 0.2 0.87 9.9 0.0 4.6 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 CCF75748.1 - 3.5 8.7 16.2 16 6.6 0.0 6.4 7 1 0 7 7 7 0 WD domain, G-beta repeat YCII PF03795.14 CCF75750.1 - 0.00057 20.3 0.0 0.59 10.6 0.0 2.4 2 0 0 2 2 2 2 YCII-related domain Nif11 PF07862.11 CCF75751.1 - 0.0072 16.6 0.1 0.26 11.6 0.0 2.5 2 0 0 2 2 2 1 Nif11 domain XRN_N PF03159.18 CCF75751.1 - 0.06 12.8 0.8 0.1 12.0 0.2 1.6 2 0 0 2 2 2 0 XRN 5'-3' exonuclease N-terminus eIF2A PF08662.11 CCF75752.1 - 1.2e-25 90.5 0.0 4.9e-25 88.6 0.0 1.9 1 1 0 1 1 1 1 Eukaryotic translation initiation factor eIF2A HTH_45 PF14947.6 CCF75752.1 - 0.13 12.2 0.5 0.2 11.6 0.5 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix eIF2A PF08662.11 CCF75753.1 - 0.00046 20.1 0.0 0.0044 16.9 0.0 2.4 3 0 0 3 3 3 1 Eukaryotic translation initiation factor eIF2A Brix PF04427.18 CCF75754.1 - 0.00076 19.6 0.0 0.0012 19.0 0.0 1.3 1 0 0 1 1 1 1 Brix domain Cluap1 PF10234.9 CCF75754.1 - 0.0066 15.9 0.2 0.0084 15.5 0.2 1.1 1 0 0 1 1 1 1 Clusterin-associated protein-1 ABC_tran_Xtn PF12848.7 CCF75754.1 - 0.013 15.5 1.2 0.025 14.6 1.2 1.4 1 0 0 1 1 1 0 ABC transporter Brix PF04427.18 CCF75755.1 - 3.6e-18 66.4 0.0 4.1e-18 66.2 0.0 1.0 1 0 0 1 1 1 1 Brix domain WD40 PF00400.32 CCF75756.1 - 3.8e-25 87.7 9.7 6.5e-05 23.6 0.2 6.7 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75756.1 - 2.3e-06 27.8 0.0 0.17 12.2 0.0 3.8 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain RCC1 PF00415.18 CCF75757.1 - 1.2e-13 51.5 0.8 3.9e-06 27.4 0.3 3.1 2 0 0 2 2 2 2 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 CCF75757.1 - 1.2e-12 47.3 6.5 1.3e-08 34.4 0.1 2.9 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat IQ PF00612.27 CCF75757.1 - 1.5e-11 43.0 27.2 0.00075 19.1 0.2 6.7 6 0 0 6 6 6 5 IQ calmodulin-binding motif CwfJ_C_1 PF04677.15 CCF75758.1 - 2.4e-14 53.2 0.0 4.9e-14 52.2 0.0 1.5 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 CwfJ_C_2 PF04676.14 CCF75758.1 - 0.00017 22.4 1.6 0.0011 19.8 0.5 2.2 2 0 0 2 2 2 1 Protein similar to CwfJ C-terminus 2 Ribo_biogen_C PF04034.13 CCF75759.1 - 2.2e-34 117.9 0.1 5.1e-34 116.7 0.1 1.6 1 1 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 CCF75759.1 - 2.3e-10 40.1 0.1 4.2e-10 39.3 0.1 1.5 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Aha1_N PF09229.11 CCF75761.1 - 1.1e-15 58.0 1.0 1.1e-15 58.0 1.0 2.4 2 1 0 2 2 2 1 Activator of Hsp90 ATPase, N-terminal TPR_2 PF07719.17 CCF75761.1 - 3.6e-05 23.5 19.8 0.0038 17.2 0.6 4.6 6 0 0 6 6 6 3 Tetratricopeptide repeat TPR_19 PF14559.6 CCF75761.1 - 0.00024 21.5 8.7 0.00082 19.8 0.7 2.5 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 CCF75761.1 - 0.00045 19.9 13.0 0.025 14.4 1.0 4.0 4 0 0 4 4 4 2 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 CCF75761.1 - 0.012 15.6 10.7 0.027 14.6 0.3 3.9 4 0 0 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 CCF75761.1 - 0.017 15.4 1.7 0.055 13.8 1.3 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_14 PF13428.6 CCF75761.1 - 0.023 15.5 2.9 4.4 8.4 0.1 3.7 1 1 2 3 3 3 0 Tetratricopeptide repeat TPR_11 PF13414.6 CCF75761.1 - 0.1 12.3 2.1 1.6 8.4 0.0 3.4 4 0 0 4 4 4 0 TPR repeat TPR_8 PF13181.6 CCF75761.1 - 1.4 9.3 7.4 0.31 11.4 0.5 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Myb_DNA-binding PF00249.31 CCF75762.1 - 1.6e-09 37.8 0.3 3.5e-09 36.7 0.3 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 CCF75762.1 - 0.007 16.6 0.1 0.022 15.0 0.1 1.9 1 0 0 1 1 1 1 Myb-like DNA-binding domain Baculo_p47 PF05112.12 CCF75762.1 - 0.043 13.4 1.0 0.06 12.9 1.0 1.1 1 0 0 1 1 1 0 Baculovirus P47 protein EutH PF04346.12 CCF75762.1 - 0.075 12.2 0.1 0.11 11.7 0.1 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation protein, EutH CCB1 PF12046.8 CCF75763.1 - 0.024 14.0 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B RNA_pol_Rpb4 PF03874.16 CCF75763.1 - 0.031 14.6 0.3 0.044 14.1 0.3 1.4 1 1 0 1 1 1 0 RNA polymerase Rpb4 CENP-B_N PF04218.13 CCF75763.1 - 0.11 12.1 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Oxysterol_BP PF01237.18 CCF75764.1 - 2.5e-114 382.0 0.2 3.7e-114 381.5 0.2 1.3 1 0 0 1 1 1 1 Oxysterol-binding protein PH PF00169.29 CCF75764.1 - 4.8e-11 43.1 0.5 4.8e-11 43.1 0.5 2.1 2 0 0 2 2 2 1 PH domain PH_11 PF15413.6 CCF75764.1 - 0.058 13.8 2.8 7.3 7.1 0.6 3.1 1 1 1 2 2 2 0 Pleckstrin homology domain zf-C4H2 PF10146.9 CCF75764.1 - 3.4 7.9 7.7 2.3 8.5 5.2 2.0 2 1 0 2 2 2 0 Zinc finger-containing protein Pkinase PF00069.25 CCF75767.1 - 2.8e-80 269.5 0.1 4.5e-80 268.8 0.1 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75767.1 - 3.1e-36 125.0 0.0 4.6e-36 124.4 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 CCF75767.1 - 1.3e-25 87.0 6.0 3.9e-06 26.0 0.2 4.7 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 CCF75767.1 - 7.2e-25 87.2 2.7 2e-12 47.4 1.4 2.7 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 CCF75767.1 - 1.7e-23 81.0 7.8 3.5e-07 29.4 0.2 4.5 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 CCF75767.1 - 5.6e-21 72.6 9.3 3.9e-05 23.2 0.3 5.1 5 0 0 5 5 5 4 EF-hand domain EF-hand_8 PF13833.6 CCF75767.1 - 4.5e-17 61.6 6.9 6.5e-06 25.9 0.1 4.2 3 1 1 4 4 4 3 EF-hand domain pair SPARC_Ca_bdg PF10591.9 CCF75767.1 - 1.5e-08 34.9 2.1 0.00036 20.8 0.0 2.6 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_9 PF14658.6 CCF75767.1 - 8.1e-05 22.9 0.1 0.16 12.3 0.0 2.8 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 CCF75767.1 - 0.00086 19.2 2.2 0.45 10.5 1.1 2.7 1 1 0 2 2 2 2 Cytoskeletal-regulatory complex EF hand Pkinase_fungal PF17667.1 CCF75767.1 - 0.0093 14.8 0.0 0.017 13.9 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Choline_kinase PF01633.20 CCF75767.1 - 0.023 14.3 0.3 0.28 10.7 0.0 2.4 2 0 0 2 2 2 0 Choline/ethanolamine kinase Kdo PF06293.14 CCF75767.1 - 0.026 13.9 0.1 0.06 12.7 0.1 1.7 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF75767.1 - 0.054 13.4 0.0 0.1 12.5 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Dockerin_1 PF00404.18 CCF75767.1 - 0.12 12.6 3.1 7.3 6.9 0.3 3.8 2 1 1 3 3 3 0 Dockerin type I domain ubiquitin PF00240.23 CCF75768.1 - 1.3e-12 47.2 0.1 2.4e-12 46.4 0.1 1.4 1 0 0 1 1 1 1 Ubiquitin family UBA PF00627.31 CCF75768.1 - 0.00049 19.9 0.0 0.0011 18.8 0.0 1.7 1 0 0 1 1 1 1 UBA/TS-N domain Rad60-SLD PF11976.8 CCF75768.1 - 0.0039 17.0 0.0 0.0082 15.9 0.0 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like HOIP-UBA PF16678.5 CCF75768.1 - 0.046 13.7 0.0 0.087 12.8 0.0 1.4 1 0 0 1 1 1 0 HOIP UBA domain pair TBK1_ULD PF18396.1 CCF75768.1 - 0.14 12.1 0.0 0.3 11.0 0.0 1.6 1 0 0 1 1 1 0 TANK binding kinase 1 ubiquitin-like domain RuBisCO_small PF00101.20 CCF75770.1 - 0.18 11.8 0.0 0.45 10.5 0.0 1.6 1 0 0 1 1 1 0 Ribulose bisphosphate carboxylase, small chain RecX PF02631.16 CCF75770.1 - 0.21 12.0 0.6 6.7 7.2 0.0 2.9 3 0 0 3 3 3 0 RecX family Cytochrom_C PF00034.21 CCF75771.1 - 1.7e-11 45.1 0.1 4.7e-11 43.7 0.1 1.6 1 1 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 CCF75771.1 - 6.1e-07 29.7 1.1 4.8e-06 26.8 1.1 2.0 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 CCF75771.1 - 0.00066 19.4 0.1 0.0019 17.9 0.0 1.7 2 1 0 2 2 2 1 Cytochrome c-550 domain FOG_N PF15888.5 CCF75771.1 - 0.1 13.0 0.0 0.15 12.5 0.0 1.2 1 0 0 1 1 1 0 Folded gastrulation N-terminus TRAM_LAG1_CLN8 PF03798.16 CCF75772.1 - 3e-28 98.9 28.2 6.5e-28 97.8 28.2 1.6 1 1 0 1 1 1 1 TLC domain DUF1744 PF08490.12 CCF75772.1 - 0.003 16.2 0.0 0.0044 15.6 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1744) Wx5_PLAF3D7 PF09688.10 CCF75772.1 - 0.044 13.8 0.4 0.073 13.1 0.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (Wx5_PLAF3D7) Sec62 PF03839.16 CCF75774.1 - 2.6e-31 108.8 6.1 2.6e-31 108.8 6.1 1.6 2 0 0 2 2 2 1 Translocation protein Sec62 Ribosomal_L20 PF00453.18 CCF75775.1 - 1.3e-23 83.2 1.2 1.6e-23 82.8 1.2 1.1 1 0 0 1 1 1 1 Ribosomal protein L20 DRMBL PF07522.14 CCF75776.1 - 1.1e-15 57.8 0.7 2.2e-15 56.8 0.7 1.5 1 0 0 1 1 1 1 DNA repair metallo-beta-lactamase Lactamase_B PF00753.27 CCF75776.1 - 0.0093 16.0 3.6 0.031 14.3 1.4 2.1 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily RMMBL PF07521.12 CCF75776.1 - 0.1 12.5 0.0 0.22 11.5 0.0 1.5 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Polbeta PF18765.1 CCF75776.1 - 0.18 11.9 1.7 2.9 8.1 0.7 2.4 2 0 0 2 2 2 0 Polymerase beta, Nucleotidyltransferase PRP21_like_P PF12230.8 CCF75777.1 - 5.7e-37 127.7 1.3 5.7e-37 127.7 1.3 2.0 2 0 0 2 2 2 1 Pre-mRNA splicing factor PRP21 like protein Surp PF01805.20 CCF75777.1 - 4e-34 116.4 1.9 3.7e-16 58.8 0.5 2.7 2 0 0 2 2 2 2 Surp module Pkinase PF00069.25 CCF75779.1 - 3.8e-37 128.1 0.0 7.3e-18 64.9 0.0 2.3 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75779.1 - 5e-19 68.6 0.0 1.1e-14 54.4 0.0 2.2 1 1 0 1 1 1 1 Protein tyrosine kinase ThiF PF00899.21 CCF75780.1 - 0.0029 17.0 0.0 0.014 14.7 0.0 2.0 1 1 0 1 1 1 1 ThiF family Methyltransf_16 PF10294.9 CCF75781.1 - 7.2e-28 97.5 0.0 1.2e-27 96.7 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Ank_2 PF12796.7 CCF75781.1 - 5.1e-13 49.4 0.2 2.7e-11 43.9 0.1 2.3 1 1 1 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 CCF75781.1 - 1.1e-12 48.2 0.3 9.6e-06 26.1 0.2 3.4 2 1 1 3 3 3 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 CCF75781.1 - 1.3e-12 47.6 0.1 9.9e-10 38.5 0.1 3.3 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Methyltransf_31 PF13847.6 CCF75781.1 - 9.4e-10 38.5 0.2 2.4e-09 37.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Ank_3 PF13606.6 CCF75781.1 - 1.3e-08 34.4 0.0 0.00017 21.8 0.0 3.8 3 0 0 3 3 3 2 Ankyrin repeat Ank PF00023.30 CCF75781.1 - 1.5e-08 34.7 0.0 0.002 18.5 0.0 3.7 2 1 0 2 2 2 2 Ankyrin repeat PrmA PF06325.13 CCF75781.1 - 1.1e-06 28.3 0.1 1.7e-06 27.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 CCF75781.1 - 6.7e-06 26.7 0.0 2.3e-05 25.0 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF75781.1 - 9.5e-05 23.1 0.0 0.00026 21.7 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 CCF75781.1 - 0.00016 22.2 0.0 0.00054 20.6 0.0 1.9 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 CCF75781.1 - 0.0014 18.2 0.0 0.0035 16.9 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase small domain GidB PF02527.15 CCF75781.1 - 0.0036 16.7 0.0 0.0092 15.3 0.0 1.7 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_23 PF13489.6 CCF75781.1 - 0.0046 16.8 0.0 0.0091 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 CCF75781.1 - 0.0067 16.2 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein NIF PF03031.18 CCF75782.1 - 5.7e-32 110.6 1.0 1.1e-31 109.7 0.2 1.8 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase DUF705 PF05152.12 CCF75782.1 - 0.066 12.7 0.2 1.9 7.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF705) DUF2608 PF11019.8 CCF75782.1 - 0.11 12.0 0.0 0.39 10.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2608) Syntaxin-6_N PF09177.11 CCF75783.1 - 0.09 13.3 1.3 0.16 12.5 1.0 1.6 1 1 0 1 1 1 0 Syntaxin 6, N-terminal DUF883 PF05957.13 CCF75783.1 - 0.13 12.9 2.1 1.2 9.7 0.4 2.2 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) ECH_2 PF16113.5 CCF75783.1 - 0.13 11.7 1.5 0.16 11.4 1.5 1.2 1 0 0 1 1 1 0 Enoyl-CoA hydratase/isomerase HSCB_C PF07743.13 CCF75783.1 - 0.7 10.4 8.6 1.2 9.6 1.0 2.4 2 1 0 2 2 2 0 HSCB C-terminal oligomerisation domain DASH_Dad1 PF08649.10 CCF75783.1 - 1.7 8.9 4.7 35 4.7 0.5 3.1 3 0 0 3 3 3 0 DASH complex subunit Dad1 Ribosomal_S5 PF00333.20 CCF75786.1 - 6.7e-28 96.5 1.3 7.9e-28 96.2 0.4 1.6 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 CCF75786.1 - 1.1e-22 79.3 0.0 1.9e-22 78.5 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain DUF2089 PF09862.9 CCF75787.1 - 0.081 13.0 0.1 0.25 11.4 0.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2089) zf_Hakai PF18408.1 CCF75788.1 - 0.027 14.2 0.1 0.043 13.5 0.1 1.3 1 0 0 1 1 1 0 C2H2 Hakai zinc finger domain Ribosomal_S14 PF00253.21 CCF75788.1 - 0.045 13.5 1.2 0.071 12.9 0.5 1.7 2 0 0 2 2 2 0 Ribosomal protein S14p/S29e MatC_N PF07158.11 CCF75792.1 - 0.047 13.7 1.2 3.6 7.6 0.1 2.5 2 1 0 2 2 2 0 Dicarboxylate carrier protein MatC N-terminus HSP70 PF00012.20 CCF75793.1 - 8e-270 896.2 8.8 9.2e-270 896.0 8.8 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 CCF75793.1 - 1.7e-15 56.7 0.9 2.5e-13 49.5 0.1 2.6 2 1 0 2 2 2 2 MreB/Mbl protein FGGY_C PF02782.16 CCF75793.1 - 0.00079 19.2 0.0 0.0048 16.7 0.0 2.2 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 CCF75793.1 - 0.024 15.0 1.0 13 6.3 0.0 3.5 3 2 0 3 3 3 0 Cell division protein FtsA eRF1_2 PF03464.15 CCF75795.1 - 3.4e-44 150.4 0.0 5.4e-44 149.7 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 CCF75795.1 - 2.4e-37 127.9 0.1 5.2e-37 126.8 0.1 1.6 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 CCF75795.1 - 2.5e-20 72.8 0.0 4.2e-20 72.1 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 acVLRF1 PF18859.1 CCF75795.1 - 6e-10 39.5 0.0 9.5e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 CCF75795.1 - 5.4e-09 36.4 0.0 9.2e-09 35.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 DUF5643 PF18705.1 CCF75795.1 - 0.11 12.5 0.1 0.29 11.1 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5643) CPSF_A PF03178.15 CCF75796.1 - 1e-14 54.6 0.1 1.7e-07 30.9 0.1 3.1 3 1 0 3 3 3 2 CPSF A subunit region GAF PF01590.26 CCF75797.1 - 5.7e-08 33.5 0.1 5.5e-06 27.1 0.0 3.1 2 2 0 2 2 2 1 GAF domain GAF_2 PF13185.6 CCF75797.1 - 2.2e-06 28.0 0.0 0.00018 21.8 0.0 3.2 2 2 0 2 2 2 1 GAF domain ABC_tran PF00005.27 CCF75798.1 - 5.6e-28 98.2 0.0 7.5e-14 52.4 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_23 PF13476.6 CCF75798.1 - 0.00012 22.7 0.2 0.004 17.7 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 CCF75798.1 - 0.00012 22.0 3.4 0.079 12.8 0.2 3.5 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 CCF75798.1 - 0.00016 21.5 0.1 0.11 12.1 0.0 2.2 2 0 0 2 2 2 2 AAA ATPase domain AAA_16 PF13191.6 CCF75798.1 - 0.00021 21.7 0.3 1.1 9.7 0.1 2.5 2 0 0 2 2 2 2 AAA ATPase domain ABC_membrane PF00664.23 CCF75798.1 - 0.00053 19.7 19.8 0.00053 19.7 19.8 3.7 4 0 0 4 4 4 1 ABC transporter transmembrane region SMC_N PF02463.19 CCF75798.1 - 0.00062 19.3 0.0 0.041 13.3 0.0 2.6 2 1 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 CCF75798.1 - 0.0021 17.7 3.2 0.16 11.7 0.2 2.6 2 0 0 2 2 2 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 CCF75798.1 - 0.0039 17.1 1.4 2 8.3 0.2 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 CCF75798.1 - 0.004 17.4 0.1 2.3 8.5 0.0 2.7 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 CCF75798.1 - 0.0053 16.7 2.1 2.9 7.9 0.1 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE DnaB_C PF03796.15 CCF75798.1 - 0.0057 16.0 0.3 0.43 9.9 0.0 2.3 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_18 PF13238.6 CCF75798.1 - 0.011 16.3 0.0 2.6 8.6 0.0 2.5 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 CCF75798.1 - 0.013 14.8 1.3 0.85 8.9 0.1 2.3 2 0 0 2 2 2 0 Zeta toxin MMR_HSR1 PF01926.23 CCF75798.1 - 0.028 14.5 0.7 2.5 8.2 0.1 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase SbcCD_C PF13558.6 CCF75798.1 - 0.029 14.6 0.0 0.088 13.1 0.0 1.8 1 0 0 1 1 1 0 Putative exonuclease SbcCD, C subunit ATPase_2 PF01637.18 CCF75798.1 - 0.031 14.2 0.0 1.9 8.4 0.0 2.4 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 CCF75798.1 - 0.045 13.5 0.3 1.1 8.9 0.0 2.3 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 CCF75798.1 - 0.078 12.7 0.5 11 5.7 0.1 2.4 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation NB-ARC PF00931.22 CCF75798.1 - 0.088 12.0 1.3 0.58 9.3 0.1 2.3 2 0 0 2 2 2 0 NB-ARC domain Dynamin_N PF00350.23 CCF75798.1 - 0.1 12.6 2.2 2.1 8.4 0.2 2.6 2 0 0 2 2 2 0 Dynamin family AAA PF00004.29 CCF75798.1 - 0.12 12.8 0.2 35 4.8 0.0 2.9 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 CCF75798.1 - 0.14 12.0 2.6 0.75 9.7 0.2 2.7 3 0 0 3 3 2 0 NACHT domain MobB PF03205.14 CCF75798.1 - 0.18 11.7 2.0 14 5.6 0.2 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B FtsK_SpoIIIE PF01580.18 CCF75798.1 - 0.2 10.9 0.9 0.39 10.0 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family T2SSE PF00437.20 CCF75798.1 - 0.23 10.5 1.9 9.5 5.2 0.4 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_33 PF13671.6 CCF75798.1 - 0.28 11.3 0.7 4.1 7.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 CCF75798.1 - 0.33 10.6 0.5 4.6 6.9 0.1 2.2 2 0 0 2 2 2 0 AAA domain Peptidase_C13 PF01650.18 CCF75799.1 - 4.4e-12 46.1 0.8 6.8e-08 32.3 0.0 2.4 2 0 0 2 2 2 2 Peptidase C13 family s48_45 PF07422.13 CCF75799.1 - 2.2e-06 28.2 5.6 4.2e-06 27.3 3.5 2.7 2 1 0 2 2 2 1 Sexual stage antigen s48/45 domain Lipin_mid PF16876.5 CCF75799.1 - 0.12 12.5 0.1 0.36 11.0 0.1 1.7 1 0 0 1 1 1 0 Lipin/Ned1/Smp2 multi-domain protein middle domain ParA PF10609.9 CCF75801.1 - 9.8e-52 175.8 0.0 1.6e-50 171.9 0.0 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 CCF75801.1 - 7e-10 39.0 0.1 1.1e-09 38.4 0.1 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 CCF75801.1 - 1.9e-08 34.4 0.2 4.6e-08 33.2 0.0 1.7 2 0 0 2 2 2 1 AAA domain MipZ PF09140.11 CCF75801.1 - 0.0029 16.9 0.0 0.0041 16.4 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 CCF75801.1 - 0.0063 16.0 0.1 0.63 9.5 0.1 2.4 2 1 0 2 2 2 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 CCF75801.1 - 0.042 13.0 0.2 0.08 12.1 0.2 1.4 1 0 0 1 1 1 0 Anion-transporting ATPase Ribosomal_S7 PF00177.21 CCF75802.1 - 4.5e-39 133.5 2.6 6e-39 133.1 2.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Ubiq_cyt_C_chap PF03981.12 CCF75803.1 - 4.8e-15 55.9 0.0 6.7e-15 55.4 0.0 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone tRNA-synt_2 PF00152.20 CCF75804.1 - 9.2e-81 271.3 0.0 1.2e-80 270.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 CCF75804.1 - 2.6e-09 36.9 0.2 5e-09 36.0 0.2 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 CCF75804.1 - 0.0002 20.9 0.2 0.0035 16.8 0.1 2.5 3 0 0 3 3 3 1 tRNA synthetases class II core domain (F) DHHC PF01529.20 CCF75805.1 - 4.3e-25 88.4 20.3 4.3e-25 88.4 20.3 2.2 1 1 1 2 2 2 1 DHHC palmitoyltransferase DUF5551 PF17705.1 CCF75805.1 - 0.16 11.6 0.2 0.27 10.9 0.2 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5551) BofC_C PF08955.10 CCF75806.1 - 0.0099 15.9 0.0 0.014 15.5 0.0 1.3 1 0 0 1 1 1 1 BofC C-terminal domain ORC5_C PF14630.6 CCF75808.1 - 0.024 14.1 0.0 0.11 12.0 0.0 1.9 1 1 0 1 1 1 0 Origin recognition complex (ORC) subunit 5 C-terminus Ribosomal_L12 PF00542.19 CCF75810.1 - 4.8e-27 94.1 5.2 6.8e-23 80.8 3.3 2.2 2 0 0 2 2 2 2 Ribosomal protein L7/L12 C-terminal domain Ribosomal_L12_N PF16320.5 CCF75810.1 - 0.0042 16.8 1.4 0.0061 16.2 0.2 1.9 2 0 0 2 2 2 1 Ribosomal protein L7/L12 dimerisation domain Prok-RING_1 PF14446.6 CCF75812.1 - 0.12 12.4 4.3 0.29 11.1 2.2 2.4 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Lar_restr_allev PF14354.6 CCF75812.1 - 0.47 10.9 4.6 0.47 10.9 0.3 3.1 4 0 0 4 4 4 0 Restriction alleviation protein Lar PhoLip_ATPase_C PF16212.5 CCF75813.1 - 6.5e-44 150.5 30.7 6.5e-44 150.5 30.7 2.9 3 0 0 3 3 3 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase PF00702.26 CCF75813.1 - 2.5e-15 57.4 0.8 2e-11 44.6 0.8 3.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase PhoLip_ATPase_N PF16209.5 CCF75813.1 - 4e-13 48.9 9.4 6.2e-13 48.2 7.0 2.5 2 0 0 2 2 2 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 CCF75813.1 - 4.8e-12 45.8 0.1 1.6e-09 37.5 0.0 3.7 3 1 0 3 3 3 1 E1-E2 ATPase Cation_ATPase PF13246.6 CCF75813.1 - 2.6e-09 37.1 0.0 1.3e-08 34.8 0.0 2.1 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 CCF75813.1 - 0.00014 21.7 0.1 0.0009 19.1 0.1 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 CCF75813.1 - 0.045 13.8 0.4 0.12 12.4 0.1 1.9 2 0 0 2 2 2 0 Haloacid dehalogenase-like hydrolase TRCF PF03461.15 CCF75813.1 - 0.13 12.6 0.0 15 6.0 0.0 2.4 2 0 0 2 2 2 0 TRCF domain DNA_topoisoIV PF00521.20 CCF75814.1 - 1.7e-111 373.1 0.0 2.7e-111 372.5 0.0 1.3 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A DNA_gyraseA_C PF03989.13 CCF75814.1 - 2.5e-06 26.9 0.3 0.055 13.0 0.0 3.7 3 0 0 3 3 3 2 DNA gyrase C-terminal domain, beta-propeller SH3_17 PF18350.1 CCF75814.1 - 0.0078 16.1 0.1 0.028 14.3 0.1 2.0 1 0 0 1 1 1 1 Restriction endonuclease SH3 domain PT PF04886.12 CCF75815.1 - 4.1e-36 122.2 157.2 6.6e-08 32.0 35.7 7.1 1 1 4 5 5 5 4 PT repeat Brr6_like_C_C PF10104.9 CCF75816.1 - 4.9e-28 97.5 3.6 8.6e-28 96.8 3.6 1.3 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain HgmA PF04209.13 CCF75816.1 - 0.037 12.7 0.0 0.054 12.2 0.0 1.2 1 0 0 1 1 1 0 homogentisate 1,2-dioxygenase PCI PF01399.27 CCF75817.1 - 1.8e-07 31.6 0.8 5.7e-07 30.0 0.8 2.0 1 0 0 1 1 1 1 PCI domain RPN5_C PF18098.1 CCF75817.1 - 3.6e-06 27.0 0.5 9.8e-06 25.6 0.5 1.8 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN5 C-terminal domain eIF-1a PF01176.19 CCF75818.1 - 2.5e-21 75.2 0.0 4.3e-21 74.5 0.0 1.4 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RNA_pol_A_bac PF01000.26 CCF75819.1 - 4.3e-20 72.1 0.0 9.9e-20 71.0 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 CCF75819.1 - 3.2e-16 58.5 0.0 6.1e-16 57.6 0.0 1.4 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_7 PF12838.7 CCF75819.1 - 0.0091 16.6 1.0 0.022 15.4 1.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 CCF75819.1 - 0.012 15.7 0.4 0.025 14.7 0.4 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 CCF75819.1 - 0.013 15.7 0.7 0.028 14.6 0.7 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 CCF75819.1 - 0.063 13.4 0.8 0.19 11.9 0.8 1.8 1 0 0 1 1 1 0 4Fe-4S binding domain Fer4 PF00037.27 CCF75819.1 - 0.46 10.4 3.7 0.22 11.4 0.7 2.1 2 0 0 2 2 2 0 4Fe-4S binding domain CRAL_TRIO PF00650.20 CCF75822.1 - 8.4e-31 106.8 0.1 1.4e-30 106.2 0.1 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 CCF75822.1 - 0.00025 21.2 0.0 0.00046 20.3 0.0 1.5 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain CRAL_TRIO_N PF03765.15 CCF75822.1 - 0.014 15.6 0.0 0.036 14.2 0.0 1.8 1 0 0 1 1 1 0 CRAL/TRIO, N-terminal domain Isy1 PF06246.12 CCF75823.1 - 2.8e-51 174.5 0.9 3.2e-51 174.4 0.9 1.0 1 0 0 1 1 1 1 Isy1-like splicing family Cyto_heme_lyase PF01265.17 CCF75824.1 - 1.9e-42 145.9 9.1 3.3e-41 141.8 9.1 2.0 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase Tachykinin PF02202.16 CCF75824.1 - 1.9 8.6 3.8 23 5.2 0.4 3.4 3 0 0 3 3 3 0 Tachykinin family ASF1_hist_chap PF04729.13 CCF75825.1 - 2.2e-58 196.6 0.3 2.7e-58 196.3 0.3 1.1 1 0 0 1 1 1 1 ASF1 like histone chaperone DHHC PF01529.20 CCF75826.1 - 1.9e-32 112.2 19.8 1.9e-32 112.2 19.8 2.0 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF3961 PF13106.6 CCF75826.1 - 0.11 12.2 0.2 0.35 10.6 0.2 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3961) Ccdc124 PF06244.12 CCF75827.1 - 7.4e-31 107.4 26.1 2e-27 96.3 26.1 2.2 1 1 0 1 1 1 1 Coiled-coil domain-containing protein 124 /Oxs1 HMG_box PF00505.19 CCF75827.1 - 0.0063 16.9 2.5 0.0063 16.9 2.5 3.0 2 1 0 2 2 2 1 HMG (high mobility group) box Inv-AAD PF18785.1 CCF75827.1 - 0.022 14.6 0.2 0.048 13.5 0.2 1.6 1 1 0 1 1 1 0 Invertebrate-AID/APOBEC-deaminase PCRF PF03462.18 CCF75827.1 - 0.25 11.2 12.0 0.48 10.3 12.0 1.5 1 0 0 1 1 1 0 PCRF domain RNA_pol_Rpb1_5 PF04998.17 CCF75827.1 - 0.95 8.8 6.8 1.6 8.1 6.8 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 5 LSM PF01423.22 CCF75828.1 - 0.0032 17.1 0.2 2.8 7.7 0.0 2.4 2 0 0 2 2 2 2 LSM domain DSS1_SEM1 PF05160.13 CCF75829.1 - 0.00062 19.8 12.7 0.0078 16.2 12.7 2.0 1 1 0 1 1 1 1 DSS1/SEM1 family Adaptin_N PF01602.20 CCF75830.1 - 6.1e-75 252.8 13.9 8.3e-75 252.3 13.9 1.1 1 0 0 1 1 1 1 Adaptin N terminal region COP-gamma_platf PF08752.10 CCF75830.1 - 2e-21 76.7 2.6 2e-21 76.7 1.2 1.8 2 0 0 2 2 2 1 Coatomer gamma subunit appendage platform subdomain Coatomer_g_Cpla PF16381.5 CCF75830.1 - 5.3e-16 58.8 0.1 2.2e-15 56.8 0.0 2.1 2 0 0 2 2 2 1 Coatomer subunit gamma-1 C-terminal appendage platform Cnd1 PF12717.7 CCF75830.1 - 2.9e-12 46.9 13.7 1.8e-09 37.9 0.6 5.2 3 1 1 4 4 4 2 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 CCF75830.1 - 2.8e-08 34.1 0.0 0.0013 19.1 0.0 4.2 3 1 1 4 4 4 2 HEAT repeats RTP1_C1 PF10363.9 CCF75830.1 - 0.0039 17.4 0.3 5 7.3 0.0 3.9 2 2 2 4 4 4 1 Required for nuclear transport of RNA pol II C-terminus 1 CLASP_N PF12348.8 CCF75830.1 - 0.078 12.5 0.7 9.3 5.7 0.0 2.9 2 1 1 3 3 3 0 CLASP N terminal Pkinase PF00069.25 CCF75831.1 - 1.6e-32 113.0 0.0 9.4e-31 107.1 0.0 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75831.1 - 4.7e-15 55.6 0.0 2.7e-14 53.1 0.0 2.0 1 1 1 2 2 2 1 Protein tyrosine kinase Kinase-like PF14531.6 CCF75831.1 - 0.00027 20.4 0.0 0.019 14.3 0.1 2.2 2 0 0 2 2 2 1 Kinase-like DUF4694 PF15765.5 CCF75831.1 - 0.044 13.8 0.7 0.1 12.7 0.7 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4694) APH PF01636.23 CCF75831.1 - 0.064 13.2 0.1 0.13 12.2 0.2 1.5 1 1 0 1 1 1 0 Phosphotransferase enzyme family Cript PF10235.9 CCF75832.1 - 9e-12 45.4 2.3 9e-12 45.4 2.3 1.6 1 1 1 2 2 2 1 Microtubule-associated protein CRIPT DZR PF12773.7 CCF75832.1 - 0.00074 19.5 0.7 0.02 14.9 0.1 2.3 1 1 1 2 2 2 1 Double zinc ribbon DUF2039 PF10217.9 CCF75832.1 - 0.0048 17.2 1.5 0.0048 17.2 1.5 1.9 1 1 1 2 2 2 1 Uncharacterized conserved protein (DUF2039) zinc_ribbon_15 PF17032.5 CCF75832.1 - 0.073 13.8 6.3 0.073 13.8 2.6 2.4 2 1 0 2 2 2 0 zinc-ribbon family TackOD1 PF18551.1 CCF75832.1 - 0.18 11.5 5.0 0.081 12.6 1.1 1.9 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 YdjO PF14169.6 CCF75832.1 - 0.21 11.4 7.8 8.8 6.1 0.1 3.1 2 1 1 3 3 3 0 Cold-inducible protein YdjO zf-piccolo PF05715.13 CCF75832.1 - 0.35 11.1 5.1 0.15 12.2 1.7 2.0 2 0 0 2 2 2 0 Piccolo Zn-finger ADK_lid PF05191.14 CCF75832.1 - 0.93 9.5 5.1 4 7.5 0.2 2.8 3 0 0 3 3 3 0 Adenylate kinase, active site lid zf-C3HC4_3 PF13920.6 CCF75832.1 - 5.4 7.0 9.5 64 3.5 5.5 3.0 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) Vps36-NZF-N PF16988.5 CCF75832.1 - 9.9 5.7 9.5 0.11 11.9 2.2 1.5 2 0 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-BED PF02892.15 CCF75832.1 - 9.9 6.3 8.6 8.1 6.6 0.2 2.8 3 0 0 3 3 3 0 BED zinc finger Dynamin_M PF01031.20 CCF75833.1 - 2e-71 240.6 1.6 2.3e-71 240.3 0.1 1.8 2 0 0 2 2 2 1 Dynamin central region Dynamin_N PF00350.23 CCF75833.1 - 1.9e-48 164.7 0.2 8.2e-48 162.6 0.0 2.1 2 0 0 2 2 2 1 Dynamin family GED PF02212.18 CCF75833.1 - 8.5e-20 70.7 4.0 1.7e-18 66.6 0.2 3.3 3 0 0 3 3 3 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 CCF75833.1 - 4.8e-05 23.4 0.0 0.00014 21.9 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase TBCA PF02970.16 CCF75833.1 - 0.048 14.0 0.2 0.19 12.1 0.2 1.9 2 0 0 2 2 2 0 Tubulin binding cofactor A Peptidase_M22 PF00814.25 CCF75835.1 - 3.3e-63 213.9 0.0 3.2e-61 207.4 0.0 2.0 1 1 0 1 1 1 1 Glycoprotease family PCI PF01399.27 CCF75836.1 - 7.7e-16 58.5 1.6 7.7e-16 58.5 1.6 2.3 2 0 0 2 2 2 1 PCI domain SpoU_methylase PF00588.19 CCF75839.1 - 0.15 12.2 0.0 0.31 11.2 0.0 1.5 1 0 0 1 1 1 0 SpoU rRNA Methylase family LRR_4 PF12799.7 CCF75840.1 - 1.2e-38 130.4 58.3 4.4e-09 36.5 1.9 7.2 3 1 6 9 9 9 9 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 CCF75840.1 - 2.5e-19 68.8 38.6 9.3e-05 22.1 0.2 6.5 3 1 2 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 CCF75840.1 - 1.6e-18 66.8 18.0 3e-09 36.6 1.5 4.2 1 1 3 4 4 4 4 Leucine-rich repeat LRR_6 PF13516.6 CCF75840.1 - 0.0011 18.8 25.2 8.3 6.7 0.5 9.4 10 0 0 10 10 10 3 Leucine Rich repeat LRR_1 PF00560.33 CCF75840.1 - 0.0095 16.3 39.6 14 6.7 0.1 10.6 10 1 0 10 10 10 2 Leucine Rich Repeat DUF3408 PF11888.8 CCF75840.1 - 0.12 12.5 0.4 0.26 11.4 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3408) WD40 PF00400.32 CCF75841.1 - 3.7e-50 166.8 25.8 4e-12 46.4 0.1 7.1 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75841.1 - 1.6e-11 44.4 1.9 1.3 9.4 0.0 5.3 2 2 3 5 5 5 5 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 CCF75841.1 - 9.6e-06 25.6 0.0 0.11 12.4 0.0 3.2 1 1 2 3 3 3 3 Eukaryotic translation initiation factor eIF2A WD40_like PF17005.5 CCF75841.1 - 5.3e-05 22.7 0.0 0.022 14.1 0.0 2.7 2 1 0 2 2 2 2 WD40-like domain Ge1_WD40 PF16529.5 CCF75841.1 - 0.00016 20.8 0.0 5.6 5.8 0.0 4.2 3 1 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein PALB2_WD40 PF16756.5 CCF75841.1 - 0.00047 19.2 3.0 0.00082 18.4 0.1 2.5 2 1 0 2 2 2 1 Partner and localizer of BRCA2 WD40 domain PQQ_3 PF13570.6 CCF75841.1 - 0.0013 19.2 0.0 0.12 12.9 0.0 3.4 3 0 0 3 3 3 1 PQQ-like domain Cytochrom_D1 PF02239.16 CCF75841.1 - 0.007 14.9 0.1 4.3 5.8 0.0 2.9 2 1 1 3 3 3 2 Cytochrome D1 heme domain PD40 PF07676.12 CCF75841.1 - 0.026 14.5 0.0 14 5.7 0.0 3.6 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat RPAP1_C PF08620.10 CCF75842.1 - 1.1e-19 70.3 0.0 2.8e-19 69.0 0.0 1.8 1 0 0 1 1 1 1 RPAP1-like, C-terminal QVR PF17064.5 CCF75843.1 - 0.07 13.4 0.0 0.2 11.9 0.0 1.7 1 0 0 1 1 1 0 Sleepless protein Tubulin_3 PF14881.6 CCF75843.1 - 0.082 12.6 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Tubulin domain WD40 PF00400.32 CCF75844.1 - 2.9e-37 126.0 22.8 2.3e-08 34.5 0.1 9.2 7 2 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75844.1 - 4.3e-17 62.2 1.3 0.00036 20.8 0.0 4.7 3 1 1 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain NLE PF08154.12 CCF75844.1 - 4.7e-12 46.3 0.2 1.3e-11 44.8 0.2 1.9 1 0 0 1 1 1 1 NLE (NUC135) domain HTH_9 PF08221.11 CCF75844.1 - 4.9e-07 29.7 0.3 4.9e-07 29.7 0.3 2.4 2 0 0 2 2 2 1 RNA polymerase III subunit RPC82 helix-turn-helix domain Nup160 PF11715.8 CCF75844.1 - 3.8e-06 25.8 1.4 0.036 12.7 0.1 3.2 3 0 0 3 3 3 2 Nucleoporin Nup120/160 eIF2A PF08662.11 CCF75844.1 - 8.4e-05 22.5 0.0 0.59 10.0 0.0 2.7 2 0 0 2 2 2 2 Eukaryotic translation initiation factor eIF2A Ge1_WD40 PF16529.5 CCF75844.1 - 0.011 14.8 0.5 3.1 6.7 0.0 3.7 3 1 1 4 4 4 0 WD40 region of Ge1, enhancer of mRNA-decapping protein HTH_IclR PF09339.10 CCF75844.1 - 0.041 13.7 0.0 0.26 11.1 0.0 2.3 2 0 0 2 2 2 0 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 CCF75844.1 - 0.15 11.9 0.1 1.5 8.7 0.1 2.3 2 0 0 2 2 2 0 TFIIE alpha subunit EMP24_GP25L PF01105.24 CCF75845.1 - 0.28 11.1 1.2 0.64 9.9 1.2 1.5 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD SLATT_4 PF18186.1 CCF75845.1 - 0.34 10.6 1.8 0.62 9.7 1.8 1.4 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 DUF3139 PF11337.8 CCF75845.1 - 2.2 9.0 6.3 5.8 7.6 0.8 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF3139) Ribosomal_L11_N PF03946.14 CCF75846.1 - 6.5e-17 61.1 0.1 9.2e-17 60.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 CCF75846.1 - 6.8e-13 48.9 0.0 1.1e-12 48.2 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Ribosomal_L2_C PF03947.18 CCF75847.1 - 6.7e-45 152.3 3.2 1.2e-44 151.5 3.2 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 CCF75847.1 - 3.4e-17 62.2 0.7 1e-16 60.6 0.7 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain PHD_Oberon PF07227.11 CCF75848.1 - 0.77 9.6 5.5 0.16 11.9 0.7 2.3 2 1 1 3 3 3 0 PHD - plant homeodomain finger protein Ribosomal_L2_C PF03947.18 CCF75849.1 - 6.5e-45 152.4 3.2 1.2e-44 151.6 3.2 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 CCF75849.1 - 3.3e-17 62.2 0.7 9.8e-17 60.7 0.7 1.9 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain GTP_EFTU PF00009.27 CCF75850.1 - 1.8e-09 37.4 0.0 6e-09 35.7 0.0 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 CCF75850.1 - 5e-05 23.4 0.0 0.00013 22.1 0.0 1.7 1 0 0 1 1 1 1 Translation-initiation factor 2 Phosducin PF02114.16 CCF75850.1 - 0.00073 18.6 0.0 0.0012 17.8 0.0 1.2 1 0 0 1 1 1 1 Phosducin MMR_HSR1 PF01926.23 CCF75850.1 - 0.003 17.6 0.0 0.0075 16.4 0.0 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 CCF75850.1 - 0.019 14.4 0.0 0.039 13.4 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit Roc PF08477.13 CCF75850.1 - 0.027 14.7 0.0 0.083 13.1 0.0 1.8 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase PseudoU_synth_1 PF01416.20 CCF75851.1 - 1.6e-16 60.7 0.0 1.7e-13 50.9 0.0 2.4 2 0 0 2 2 2 2 tRNA pseudouridine synthase Ribosomal_S11 PF00411.19 CCF75852.1 - 7.9e-45 151.8 0.6 1.4e-44 151.0 0.6 1.4 1 0 0 1 1 1 1 Ribosomal protein S11 NIF PF03031.18 CCF75854.1 - 1.3e-37 129.0 0.7 2.8e-37 127.9 0.3 1.7 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase AMPKBI PF04739.15 CCF75854.1 - 0.2 12.0 0.4 9.4 6.6 0.2 2.6 2 1 0 2 2 2 0 5'-AMP-activated protein kinase beta subunit, interaction domain BolA PF01722.18 CCF75855.1 - 3.5e-17 62.4 0.0 9.8e-17 61.0 0.0 1.6 1 1 0 1 1 1 1 BolA-like protein zf-B_box PF00643.24 CCF75857.1 - 5.5e-11 42.4 16.6 3.2e-06 27.2 0.9 2.8 3 0 0 3 3 3 2 B-box zinc finger DUF2318 PF10080.9 CCF75857.1 - 0.04 14.1 0.5 0.04 14.1 0.5 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2318) ALMT PF11744.8 CCF75857.1 - 0.082 11.7 1.8 0.14 11.0 1.8 1.3 1 0 0 1 1 1 0 Aluminium activated malate transporter FYVE PF01363.21 CCF75857.1 - 0.39 10.9 10.4 0.27 11.4 7.5 2.2 1 1 0 1 1 1 0 FYVE zinc finger TMPIT PF07851.13 CCF75857.1 - 1.6 7.9 5.2 2.7 7.2 5.2 1.3 1 0 0 1 1 1 0 TMPIT-like protein zf-NOSIP PF15906.5 CCF75858.1 - 3.2e-11 43.2 0.1 5.5e-11 42.4 0.1 1.4 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein zf-C3HC4_2 PF13923.6 CCF75858.1 - 7.8e-05 22.4 2.2 0.00016 21.4 2.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 CCF75858.1 - 0.00012 22.0 1.6 0.00012 22.0 1.6 2.0 2 0 0 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 CCF75858.1 - 0.00075 19.3 2.3 0.0016 18.3 2.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 CCF75858.1 - 0.0013 18.9 0.7 0.0031 17.6 0.7 1.7 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 CCF75858.1 - 0.01 15.7 1.5 0.01 15.7 1.5 2.2 3 0 0 3 3 3 0 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 CCF75858.1 - 0.018 14.9 1.2 0.018 14.9 1.2 1.7 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 CCF75858.1 - 0.031 14.2 3.8 0.032 14.2 2.1 1.9 2 0 0 2 2 2 0 zinc-RING finger domain Ima1_N PF09779.9 CCF75858.1 - 0.073 13.9 0.1 0.13 13.2 0.1 1.4 1 0 0 1 1 1 0 Ima1 N-terminal domain zf-RING_2 PF13639.6 CCF75858.1 - 0.48 10.8 5.8 0.15 12.4 2.8 1.7 2 0 0 2 2 2 0 Ring finger domain SWIB PF02201.18 CCF75859.1 - 3.9e-22 77.9 0.0 5.7e-22 77.4 0.0 1.3 1 0 0 1 1 1 1 SWIB/MDM2 domain AP2 PF00847.20 CCF75860.1 - 5.4e-16 58.6 8.1 1.8e-06 28.1 1.1 3.6 3 0 0 3 3 3 3 AP2 domain eIF2A PF08662.11 CCF75861.1 - 3.7e-26 92.2 1.2 1.1e-20 74.3 0.4 4.6 3 2 0 3 3 3 2 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 CCF75861.1 - 0.032 15.1 2.9 28 5.8 0.0 4.0 3 0 0 3 3 3 0 WD domain, G-beta repeat DUF1706 PF08020.11 CCF75861.1 - 0.12 12.2 3.3 0.34 10.8 3.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1706) DivIC PF04977.15 CCF75861.1 - 0.13 12.0 2.7 0.23 11.2 2.1 1.7 1 1 0 1 1 1 0 Septum formation initiator Ribosomal_L37e PF01907.19 CCF75862.1 - 2.5e-25 88.4 7.8 4.8e-25 87.5 7.8 1.5 1 0 0 1 1 1 1 Ribosomal protein L37e DZR PF12773.7 CCF75862.1 - 0.021 14.8 1.4 0.036 14.1 1.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon HypA PF01155.19 CCF75862.1 - 0.045 13.8 0.2 0.055 13.5 0.2 1.2 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF1258 PF06869.12 CCF75862.1 - 0.057 12.9 0.5 0.066 12.7 0.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1258) zf-RING_5 PF14634.6 CCF75862.1 - 0.11 12.4 3.0 0.18 11.8 3.0 1.3 1 0 0 1 1 1 0 zinc-RING finger domain Tnp_zf-ribbon_2 PF13842.6 CCF75862.1 - 0.17 12.7 4.1 2.9 8.8 1.6 2.3 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon GCV_H PF01597.19 CCF75863.1 - 1.3e-15 57.3 0.1 1.5e-15 57.2 0.1 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 CCF75863.1 - 0.0006 19.6 0.0 0.00081 19.2 0.0 1.2 1 0 0 1 1 1 1 Biotin-requiring enzyme Cep57_CLD_2 PF14197.6 CCF75864.1 - 0.06 13.4 0.8 0.21 11.7 0.4 2.2 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Radical_SAM_C PF16199.5 CCF75864.1 - 0.11 12.5 0.0 0.54 10.3 0.0 2.2 2 0 0 2 2 2 0 Radical_SAM C-terminal domain RIX1 PF08167.12 CCF75867.1 - 0.41 10.4 2.8 0.42 10.3 0.1 2.3 2 1 1 3 3 3 0 rRNA processing/ribosome biogenesis IBN_N PF03810.19 CCF75868.1 - 0.00035 20.4 2.2 0.0035 17.2 0.1 3.3 3 1 1 4 4 4 1 Importin-beta N-terminal domain DUF1805 PF08827.11 CCF75868.1 - 0.033 14.5 0.0 0.076 13.4 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF1805) Syntaxin PF00804.25 CCF75869.1 - 1.5e-20 73.7 12.2 2e-20 73.3 12.2 1.2 1 0 0 1 1 1 1 Syntaxin SNARE PF05739.19 CCF75869.1 - 2.1e-07 30.8 0.1 5.4e-07 29.5 0.1 1.8 1 0 0 1 1 1 1 SNARE domain Syntaxin_2 PF14523.6 CCF75869.1 - 0.00025 21.4 9.4 0.00025 21.4 9.4 2.7 2 1 0 2 2 2 1 Syntaxin-like protein dCMP_cyt_deam_1 PF00383.23 CCF75869.1 - 0.0018 18.1 0.2 0.0042 16.9 0.2 1.6 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region DUF4145 PF13643.6 CCF75869.1 - 0.022 14.9 1.3 0.022 14.9 1.3 2.3 2 1 0 2 2 2 0 Domain of unknown function (DUF4145) Lipase_chap PF03280.14 CCF75869.1 - 0.024 14.6 5.5 0.047 13.6 5.5 1.5 1 0 0 1 1 1 0 Proteobacterial lipase chaperone protein DUF3708 PF12501.8 CCF75869.1 - 0.092 12.5 0.7 0.27 11.0 0.1 1.9 1 1 0 2 2 2 0 Phosphate ATP-binding cassette transporter GIT1_C PF12205.8 CCF75869.1 - 0.12 12.4 6.3 0.097 12.8 3.9 2.0 1 1 0 1 1 1 0 G protein-coupled receptor kinase-interacting protein 1 C term YvfG PF09628.10 CCF75869.1 - 0.28 11.5 4.0 3.7 8.0 0.4 2.8 2 0 0 2 2 2 0 YvfG protein 7TMR-HDED PF07697.11 CCF75869.1 - 0.45 10.6 14.1 1.6 8.8 13.5 2.0 1 1 0 1 1 1 0 7TM-HD extracellular MOLO1 PF17175.4 CCF75869.1 - 0.47 10.6 4.0 1.4 9.1 4.0 1.8 1 0 0 1 1 1 0 Modulator of levamisole receptor-1 Sec5 PF15469.6 CCF75869.1 - 0.68 9.7 14.5 17 5.2 13.9 2.8 1 1 0 1 1 1 0 Exocyst complex component Sec5 Mit_KHE1 PF10173.9 CCF75869.1 - 1.3 9.1 10.7 2.3 8.3 0.1 2.5 1 1 0 2 2 2 0 Mitochondrial K+-H+ exchange-related MCM_N PF14551.6 CCF75869.1 - 1.8 9.2 9.1 1.1 9.8 3.4 2.8 1 1 1 2 2 2 0 MCM N-terminal domain ComGF PF15980.5 CCF75869.1 - 2.9 8.3 11.6 0.14 12.5 2.2 3.1 1 1 3 4 4 4 0 Putative Competence protein ComGF P4Ha_N PF08336.11 CCF75869.1 - 2.9 7.9 10.8 2.2 8.3 6.3 2.9 1 1 2 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region TSC22 PF01166.18 CCF75869.1 - 2.9 8.3 5.5 6 7.3 1.1 3.4 2 1 1 3 3 3 0 TSC-22/dip/bun family CREPT PF16566.5 CCF75869.1 - 7.9 6.6 11.7 0.36 11.0 2.7 2.6 1 1 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Allexi_40kDa PF05549.11 CCF75869.1 - 8 5.9 10.0 1.9 7.9 3.9 2.2 1 1 0 2 2 2 0 Allexivirus 40kDa protein WD40 PF00400.32 CCF75870.1 - 1.3e-07 32.2 1.0 0.062 14.2 0.0 5.4 6 1 0 6 6 6 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75870.1 - 2.1e-07 31.1 0.1 0.00073 19.8 0.0 3.2 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 CCF75870.1 - 1e-06 28.3 5.9 0.0066 15.8 2.0 2.9 1 1 1 3 3 3 2 WD40-like domain Nup160 PF11715.8 CCF75870.1 - 0.027 13.1 0.4 0.05 12.3 0.3 1.4 1 1 0 1 1 1 0 Nucleoporin Nup120/160 BBS2_Mid PF14783.6 CCF75870.1 - 0.061 13.4 0.2 7.7 6.6 0.0 2.6 3 0 0 3 3 3 0 Ciliary BBSome complex subunit 2, middle region DNA_gyraseA_C PF03989.13 CCF75870.1 - 0.13 11.8 0.1 2 7.9 0.0 2.4 2 0 0 2 2 2 0 DNA gyrase C-terminal domain, beta-propeller AP2 PF00847.20 CCF75871.1 - 5.2e-08 33.0 0.4 1e-07 32.0 0.4 1.6 1 0 0 1 1 1 1 AP2 domain CRT-like PF08627.10 CCF75873.1 - 1.8e-46 158.6 32.3 1.2e-43 149.3 32.3 2.0 1 1 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like EamA PF00892.20 CCF75873.1 - 0.004 17.3 13.6 0.004 17.3 13.6 3.1 3 0 0 3 3 3 1 EamA-like transporter family CAP PF00188.26 CCF75874.1 - 2.6e-10 41.2 0.6 4.3e-10 40.5 0.6 1.4 1 0 0 1 1 1 1 Cysteine-rich secretory protein family DnaJ-X PF14308.6 CCF75875.1 - 2.8e-44 151.1 4.2 5.8e-44 150.1 4.2 1.5 1 0 0 1 1 1 1 X-domain of DnaJ-containing DnaJ PF00226.31 CCF75875.1 - 2.1e-24 85.4 2.3 4.2e-24 84.4 1.3 2.1 2 0 0 2 2 2 1 DnaJ domain ATG_C PF09333.11 CCF75875.1 - 7.6e-05 23.0 0.6 0.0018 18.6 0.0 3.1 4 0 0 4 4 4 1 Autophagy-related protein C terminal domain TraD PF06412.11 CCF75875.1 - 0.024 14.5 0.7 0.14 12.0 0.2 2.5 2 0 0 2 2 2 0 Conjugal transfer protein TraD TPR_2 PF07719.17 CCF75875.1 - 0.57 10.4 3.8 1 9.6 0.3 3.2 3 1 1 4 4 4 0 Tetratricopeptide repeat Ribosomal_S14 PF00253.21 CCF75876.1 - 9.8e-14 50.9 4.1 1.2e-13 50.6 4.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e DUF1289 PF06945.13 CCF75876.1 - 0.0069 16.2 1.4 0.014 15.2 1.4 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF1289) DUF4428 PF14471.6 CCF75876.1 - 0.016 15.1 0.4 0.02 14.8 0.4 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4428) HypA PF01155.19 CCF75876.1 - 0.11 12.5 0.2 0.13 12.3 0.2 1.0 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RPAP3_C PF13877.6 CCF75878.1 - 0.034 14.7 1.0 1.3 9.6 0.0 3.5 3 0 0 3 3 3 0 Potential Monad-binding region of RPAP3 Peptidase_M16_C PF05193.21 CCF75879.1 - 1.6e-28 100.0 0.0 2.8e-28 99.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 CCF75879.1 - 4.3e-27 94.9 0.0 6.6e-27 94.3 0.0 1.3 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Dehydratase_LU PF02286.15 CCF75879.1 - 0.14 10.7 0.0 0.2 10.2 0.0 1.1 1 0 0 1 1 1 0 Dehydratase large subunit G10 PF01125.17 CCF75880.1 - 3.4e-63 211.8 6.2 3.8e-63 211.6 6.2 1.0 1 0 0 1 1 1 1 G10 protein Clat_adaptor_s PF01217.20 CCF75881.1 - 0.019 14.9 0.7 0.067 13.1 0.7 2.0 1 0 0 1 1 1 0 Clathrin adaptor complex small chain DUF166 PF02593.14 CCF75881.1 - 0.11 12.0 0.3 1 8.9 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function Nab2 PF11517.8 CCF75881.1 - 8.4 6.8 6.6 11 6.4 0.0 3.9 4 0 0 4 4 4 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) Archease PF01951.16 CCF75882.1 - 6.6e-37 126.8 0.1 7.3e-37 126.7 0.1 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) Ribosomal_L27A PF00828.19 CCF75884.1 - 1.7e-17 64.3 0.8 5.9e-17 62.5 0.8 2.0 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DUF848 PF05852.11 CCF75884.1 - 0.0018 18.4 0.7 0.0034 17.5 0.7 1.4 1 0 0 1 1 1 1 Gammaherpesvirus protein of unknown function (DUF848) Ribosomal_L17 PF01196.19 CCF75885.1 - 2.3e-25 89.3 2.2 3.1e-25 88.9 2.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L17 TPR_14 PF13428.6 CCF75885.1 - 0.086 13.7 1.0 0.54 11.2 0.1 2.5 3 0 0 3 3 3 0 Tetratricopeptide repeat AFG1_ATPase PF03969.16 CCF75886.1 - 8.1e-61 205.9 0.0 1.7e-59 201.6 0.0 2.2 2 0 0 2 2 2 1 AFG1-like ATPase Ribosomal_S10 PF00338.22 CCF75886.1 - 1.1e-05 25.6 0.3 4.2e-05 23.7 0.3 2.1 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e Bac_DnaA PF00308.18 CCF75886.1 - 0.00074 19.4 0.3 0.0019 18.1 0.1 1.7 2 0 0 2 2 2 1 Bacterial dnaA protein AAA_14 PF13173.6 CCF75886.1 - 0.00094 19.2 0.1 0.0031 17.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 CCF75886.1 - 0.038 14.2 0.2 0.38 11.0 0.2 2.6 2 1 0 2 2 2 0 AAA domain AAA_5 PF07728.14 CCF75886.1 - 0.048 13.7 0.0 0.092 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 CCF75886.1 - 0.05 14.0 0.1 0.62 10.4 0.0 2.2 1 1 1 2 2 2 0 AAA ATPase domain NACHT PF05729.12 CCF75886.1 - 0.08 12.9 0.1 0.21 11.5 0.1 1.9 1 1 0 1 1 1 0 NACHT domain Sigma54_activat PF00158.26 CCF75886.1 - 0.11 12.2 0.0 3 7.5 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA PF00004.29 CCF75886.1 - 0.14 12.6 0.0 0.35 11.3 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Chromo PF00385.24 CCF75887.1 - 2.7e-18 65.6 2.8 7.8e-14 51.3 0.0 2.6 2 0 0 2 2 2 2 Chromo (CHRromatin Organisation MOdifier) domain Chromo_shadow PF01393.19 CCF75887.1 - 7.9e-06 25.9 0.4 0.05 13.7 0.0 3.2 3 0 0 3 3 3 2 Chromo shadow domain DUF4816 PF16086.5 CCF75887.1 - 0.44 10.5 3.3 12 5.9 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4816) PseudoU_synth_2 PF00849.22 CCF75889.1 - 8.5e-24 84.5 0.0 1.2e-23 84.0 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase M11L PF11099.8 CCF75889.1 - 0.034 14.4 0.0 0.058 13.7 0.0 1.3 1 0 0 1 1 1 0 Apoptosis regulator M11L like DNA_RNApol_7kD PF03604.13 CCF75891.1 - 1.4e-15 56.7 3.6 1.9e-15 56.2 3.6 1.2 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.6 CCF75891.1 - 0.0014 18.0 1.6 0.011 15.1 1.7 2.2 1 1 0 1 1 1 1 zinc-ribbon domain zf-ISL3 PF14690.6 CCF75891.1 - 0.0014 19.2 2.9 0.0087 16.7 0.7 2.1 2 0 0 2 2 2 1 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DZR PF12773.7 CCF75891.1 - 0.0014 18.6 1.1 0.002 18.1 1.1 1.4 1 1 0 1 1 1 1 Double zinc ribbon HypA PF01155.19 CCF75891.1 - 0.0015 18.5 0.3 0.0017 18.3 0.3 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_10 PF10058.9 CCF75891.1 - 0.0016 18.1 0.3 0.058 13.1 0.0 2.3 2 0 0 2 2 2 1 Predicted integral membrane zinc-ribbon metal-binding protein GFA PF04828.14 CCF75891.1 - 0.0024 18.2 0.6 0.43 10.9 0.1 2.1 1 1 1 2 2 2 1 Glutathione-dependent formaldehyde-activating enzyme zf_UBZ PF18439.1 CCF75891.1 - 0.0055 16.3 0.6 0.23 11.1 0.1 2.2 2 0 0 2 2 2 1 Ubiquitin-Binding Zinc Finger DUF2318 PF10080.9 CCF75891.1 - 0.0097 16.0 1.0 0.011 15.8 1.0 1.1 1 0 0 1 1 1 1 Predicted membrane protein (DUF2318) TF_Zn_Ribbon PF08271.12 CCF75891.1 - 0.0098 15.4 1.1 3.3 7.3 0.1 2.3 2 0 0 2 2 2 2 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 CCF75891.1 - 0.011 15.4 2.2 0.17 11.7 2.2 2.2 1 1 1 2 2 2 0 A2L zinc ribbon domain zf-C2HC5 PF06221.13 CCF75891.1 - 0.016 15.2 0.1 0.026 14.5 0.1 1.4 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Zn-ribbon_8 PF09723.10 CCF75891.1 - 0.017 15.3 2.3 0.03 14.4 1.5 1.9 1 1 1 2 2 2 0 Zinc ribbon domain DUF1451 PF07295.11 CCF75891.1 - 0.021 14.9 0.1 0.027 14.5 0.1 1.2 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf-C4_Topoisom PF01396.19 CCF75891.1 - 0.031 14.0 1.1 5 7.0 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger DUF35_N PF12172.8 CCF75891.1 - 0.034 14.0 0.5 1 9.3 0.1 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) TFIIS_C PF01096.18 CCF75891.1 - 0.039 13.8 0.6 7.1 6.6 0.1 2.2 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Nudix_N_2 PF14803.6 CCF75891.1 - 0.045 13.7 1.9 6.1 6.9 0.1 2.3 2 0 0 2 2 2 0 Nudix N-terminal zinc_ribbon_2 PF13240.6 CCF75891.1 - 0.049 13.4 3.9 1.7 8.5 3.9 2.3 1 1 1 2 2 2 0 zinc-ribbon domain DUF2688 PF10892.8 CCF75891.1 - 0.059 12.9 3.6 0.39 10.2 0.6 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2688) UPF0547 PF10571.9 CCF75891.1 - 0.063 13.4 4.0 0.76 9.9 0.5 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zinc_ribbon_13 PF09855.9 CCF75891.1 - 0.075 13.2 1.8 0.14 12.4 0.1 2.0 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Rubredoxin_2 PF18073.1 CCF75891.1 - 0.08 12.7 4.9 2.2 8.1 0.3 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Prim_Zn_Ribbon PF08273.12 CCF75891.1 - 0.13 12.5 3.9 2.5 8.4 0.0 2.5 2 1 0 2 2 2 0 Zinc-binding domain of primase-helicase Tnp_zf-ribbon_2 PF13842.6 CCF75891.1 - 0.14 13.0 5.4 9.4 7.1 3.1 2.2 2 0 0 2 2 2 0 DDE_Tnp_1-like zinc-ribbon DUF2197 PF09963.9 CCF75891.1 - 0.17 12.1 3.8 3.1 8.1 0.2 2.2 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2197) zf-dskA_traR PF01258.17 CCF75891.1 - 0.43 10.6 5.4 28 4.8 5.4 2.2 1 1 0 1 1 1 0 Prokaryotic dksA/traR C4-type zinc finger Zn_ribbon_recom PF13408.6 CCF75891.1 - 0.52 10.9 6.4 1.1 9.8 3.1 2.1 2 0 0 2 2 2 0 Recombinase zinc beta ribbon domain Zn_Tnp_IS1595 PF12760.7 CCF75891.1 - 0.63 10.1 4.6 2.3 8.3 0.8 2.1 1 1 0 2 2 2 0 Transposase zinc-ribbon domain PUB PF09409.10 CCF75892.1 - 6.9e-06 25.9 0.1 1.7e-05 24.6 0.1 1.7 1 0 0 1 1 1 1 PUB domain DUF4041 PF13250.6 CCF75892.1 - 0.0061 16.4 0.4 0.12 12.3 0.1 3.2 3 0 0 3 3 3 1 Domain of unknown function (DUF4041) PriC PF07445.12 CCF75892.1 - 0.12 12.3 5.0 0.04 13.8 2.0 1.7 2 0 0 2 2 2 0 Primosomal replication protein priC YpjP PF14005.6 CCF75892.1 - 0.43 10.6 3.4 0.73 9.9 2.0 2.1 1 1 1 2 2 2 0 YpjP-like protein Sec20 PF03908.13 CCF75893.1 - 0.22 11.5 2.4 0.46 10.4 1.8 1.9 1 1 1 2 2 2 0 Sec20 Methyltransf_11 PF08241.12 CCF75895.1 - 6.4e-11 42.8 0.0 1.1e-10 42.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain WBS_methylT PF12589.8 CCF75895.1 - 3.3e-10 40.6 6.0 5.1e-10 40.0 6.0 1.3 1 0 0 1 1 1 1 Methyltransferase involved in Williams-Beuren syndrome Methyltransf_25 PF13649.6 CCF75895.1 - 3.4e-10 40.5 0.0 8.1e-10 39.3 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 CCF75895.1 - 2.5e-05 24.1 0.0 4.1e-05 23.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 CCF75895.1 - 0.0012 19.6 0.1 0.0031 18.2 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 CCF75895.1 - 0.003 17.4 0.0 0.0094 15.8 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 CCF75895.1 - 0.038 13.7 0.0 0.4 10.4 0.0 2.1 2 1 0 2 2 2 0 DNA methylase zf-CCCH_4 PF18044.1 CCF75896.1 - 4.6e-05 23.1 1.0 4.6e-05 23.1 1.0 2.9 3 0 0 3 3 3 1 CCCH-type zinc finger zf-CCCH PF00642.24 CCF75896.1 - 0.00036 20.4 19.1 0.01 15.7 1.7 4.7 3 1 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 CCF75896.1 - 0.0025 17.8 20.1 0.012 15.6 3.3 3.5 3 0 0 3 3 3 2 Zinc finger domain zf-CCCH_2 PF14608.6 CCF75896.1 - 0.011 16.2 5.0 0.011 16.2 5.0 3.4 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger Torus PF16131.5 CCF75898.1 - 4.2e-30 104.7 1.8 4.4e-30 104.6 0.2 1.7 2 0 0 2 2 2 1 Torus domain RRM_1 PF00076.22 CCF75898.1 - 0.00037 20.2 0.0 0.00086 19.1 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-CCCH_4 PF18044.1 CCF75898.1 - 0.0078 16.0 7.6 0.014 15.1 7.6 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 CCF75898.1 - 0.45 11.1 4.5 0.84 10.2 4.5 1.5 1 0 0 1 1 1 0 RNA-binding, Nab2-type zinc finger zf-CCCH PF00642.24 CCF75898.1 - 0.53 10.3 7.5 1 9.4 7.5 1.4 1 0 0 1 1 1 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 CCF75898.1 - 6.8 6.9 8.0 14 5.9 8.0 1.6 1 0 0 1 1 1 0 Zinc finger domain CDC73_C PF05179.14 CCF75900.1 - 2.3e-26 92.4 1.9 3.7e-26 91.7 0.0 2.0 2 0 0 2 2 2 1 RNA pol II accessory factor, Cdc73 family, C-terminal CofC PF01983.16 CCF75900.1 - 0.033 13.4 0.7 0.052 12.7 0.1 1.7 2 0 0 2 2 2 0 Guanylyl transferase CofC like YkuI_C PF10388.9 CCF75900.1 - 2.5 7.9 6.5 0.87 9.4 0.9 2.5 3 0 0 3 3 3 0 EAL-domain associated signalling protein domain NUDIX PF00293.28 CCF75901.1 - 2.3e-12 47.1 0.0 2.9e-12 46.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain UDPG_MGDP_dh_C PF03720.15 CCF75901.1 - 0.054 13.9 0.0 0.08 13.4 0.0 1.2 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LSM PF01423.22 CCF75902.1 - 4.3e-10 39.1 1.8 1.6e-08 34.1 0.1 2.2 1 1 1 2 2 2 2 LSM domain Hfq PF17209.3 CCF75902.1 - 0.047 13.3 0.1 0.083 12.5 0.1 1.4 1 0 0 1 1 1 0 Hfq protein SspN PF08177.11 CCF75903.1 - 5 7.1 12.8 56 3.8 0.1 4.9 4 0 0 4 4 4 0 Small acid-soluble spore protein N family VWA PF00092.28 CCF75905.1 - 2.2e-30 106.2 0.0 7.6e-30 104.4 0.0 1.9 1 0 0 1 1 1 1 von Willebrand factor type A domain TSP_1 PF00090.19 CCF75905.1 - 6.2e-16 58.4 31.4 3.5e-09 36.8 0.7 5.0 4 1 0 4 4 4 4 Thrombospondin type 1 domain VWA_2 PF13519.6 CCF75905.1 - 4.5e-11 43.4 0.0 1e-10 42.2 0.0 1.6 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 CCF75905.1 - 0.00087 19.3 0.0 0.0017 18.3 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain DUF1494 PF07379.11 CCF75905.1 - 0.17 11.7 0.0 0.37 10.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1494) FoP_duplication PF13865.6 CCF75907.1 - 9.3e-15 54.9 10.8 1.9e-14 54.0 10.8 1.6 1 1 0 1 1 1 1 C-terminal duplication domain of Friend of PRMT1 S4 PF01479.25 CCF75909.1 - 9.5e-13 47.6 1.2 1.9e-12 46.7 0.2 2.0 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 CCF75909.1 - 6.3e-08 33.4 1.1 2.6e-07 31.5 1.0 2.1 1 1 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain SPT16 PF08644.11 CCF75911.1 - 1.6e-44 151.7 4.6 3.7e-44 150.5 0.1 2.7 2 0 0 2 2 2 1 FACT complex subunit (SPT16/CDC68) FACT-Spt16_Nlob PF14826.6 CCF75911.1 - 1.1e-23 83.8 0.1 2.5e-23 82.6 0.1 1.7 1 0 0 1 1 1 1 FACT complex subunit SPT16 N-terminal lobe domain Peptidase_M24 PF00557.24 CCF75911.1 - 2.8e-21 76.2 0.0 4.7e-21 75.4 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Rtt106 PF08512.12 CCF75911.1 - 6.3e-14 52.2 0.1 1.8e-13 50.7 0.1 1.8 1 0 0 1 1 1 1 Histone chaperone Rttp106-like DNA_pol_phi PF04931.13 CCF75911.1 - 1.6 6.8 26.2 3.3 5.7 26.2 1.5 1 0 0 1 1 1 0 DNA polymerase phi Nop14 PF04147.12 CCF75911.1 - 7.2 4.7 21.9 14 3.7 21.9 1.4 1 0 0 1 1 1 0 Nop14-like family RRM_1 PF00076.22 CCF75912.1 - 2.2e-32 110.7 0.0 4.9e-21 74.3 0.1 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 CCF75912.1 - 0.00053 19.9 0.0 0.0018 18.2 0.0 1.8 2 0 0 2 2 2 1 Nup53/35/40-type RNA recognition motif RRM_3 PF08777.11 CCF75912.1 - 0.0062 16.6 0.1 0.18 11.9 0.1 2.2 2 0 0 2 2 2 1 RNA binding motif RRM_7 PF16367.5 CCF75912.1 - 0.028 14.5 0.0 0.063 13.4 0.0 1.7 1 1 0 1 1 1 0 RNA recognition motif RRM_occluded PF16842.5 CCF75912.1 - 0.075 12.9 0.0 0.13 12.1 0.0 1.3 1 0 0 1 1 1 0 Occluded RNA-recognition motif PRP38_assoc PF12871.7 CCF75912.1 - 5.5 7.7 42.1 0.35 11.5 34.7 2.3 2 0 0 2 2 2 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term Proteasome PF00227.26 CCF75914.1 - 2.9e-34 118.2 0.2 3.3e-34 118.1 0.2 1.0 1 0 0 1 1 1 1 Proteasome subunit Cyclin PF08613.11 CCF75915.1 - 8.2e-34 117.3 1.6 2.4e-33 115.8 1.6 1.8 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 CCF75915.1 - 4.4e-11 42.6 0.2 1.2e-10 41.2 0.1 1.8 2 0 0 2 2 2 1 Cyclin, N-terminal domain NDUF_B7 PF05676.13 CCF75915.1 - 0.47 10.2 3.2 0.67 9.7 1.2 2.3 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) ATP-synt_C PF00137.21 CCF75916.1 - 2.7e-30 104.5 32.3 1.1e-17 64.1 13.1 2.1 2 0 0 2 2 2 2 ATP synthase subunit C AcrZ PF10766.9 CCF75916.1 - 1.8 8.2 7.4 0.1 12.2 0.9 2.3 3 0 0 3 3 3 0 Multidrug efflux pump-associated protein AcrZ Ribosomal_L14 PF00238.19 CCF75917.1 - 2.7e-20 72.7 1.5 3.3e-20 72.4 1.5 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e GCV_T_C PF08669.11 CCF75917.1 - 0.076 12.9 0.0 0.21 11.5 0.0 1.7 2 0 0 2 2 2 0 Glycine cleavage T-protein C-terminal barrel domain SLBP_RNA_bind PF15247.6 CCF75918.1 - 9.1e-20 70.6 1.0 9.1e-20 70.6 1.0 1.9 2 0 0 2 2 2 1 Histone RNA hairpin-binding protein RNA-binding domain PUF PF00806.19 CCF75920.1 - 2.1e-54 178.3 12.9 7.1e-09 34.9 0.0 8.4 8 0 0 8 8 8 8 Pumilio-family RNA binding repeat WD40 PF00400.32 CCF75921.1 - 3e-31 107.0 10.4 8.8e-07 29.5 0.0 7.1 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75921.1 - 9.1e-08 32.3 0.6 0.062 13.6 0.0 4.5 2 2 3 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 CCF75921.1 - 0.052 12.9 0.0 2.7 7.2 0.0 2.3 1 1 1 2 2 2 0 WD40-like domain RACo_linker PF17650.1 CCF75921.1 - 0.14 12.0 0.1 0.54 10.2 0.0 2.0 2 0 0 2 2 2 0 RACo linker region DEAD PF00270.29 CCF75922.1 - 3.1e-47 160.6 0.0 2.1e-46 157.9 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF75922.1 - 1.6e-31 108.9 0.1 3.8e-31 107.7 0.1 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF75922.1 - 0.00012 22.1 0.0 0.00043 20.3 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit UbiA PF01040.18 CCF75923.1 - 2.1e-26 92.7 12.7 2.9e-26 92.3 12.7 1.2 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF1801 PF08818.11 CCF75923.1 - 0.077 13.5 0.0 0.15 12.6 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DU1801) Ribosomal_S24e PF01282.19 CCF75924.1 - 3.9e-29 100.4 0.0 6.4e-29 99.7 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S24e Pkinase PF00069.25 CCF75925.1 - 8.5e-10 38.4 0.1 9.5e-10 38.3 0.1 1.1 1 0 0 1 1 1 1 Protein kinase domain RIO1 PF01163.22 CCF75925.1 - 1e-07 31.7 0.0 1.4e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 RIO1 family Pkinase_Tyr PF07714.17 CCF75925.1 - 2.6e-07 30.2 0.0 3.3e-07 29.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 CCF75925.1 - 8.3e-06 25.3 0.0 0.00095 18.6 0.0 2.1 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF75925.1 - 0.02 14.8 0.0 2 8.3 0.0 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family SCO1-SenC PF02630.14 CCF75926.1 - 5.6e-39 133.1 0.0 8.6e-39 132.5 0.0 1.3 1 0 0 1 1 1 1 SCO1/SenC Imm57 PF15596.6 CCF75926.1 - 0.019 15.3 0.5 0.19 12.0 0.1 2.7 2 1 1 3 3 3 0 Immunity protein 57 AhpC-TSA PF00578.21 CCF75926.1 - 0.078 12.9 0.0 3 7.8 0.0 2.6 2 1 0 2 2 2 0 AhpC/TSA family Nkap_C PF06047.11 CCF75928.1 - 1.5e-22 79.6 0.8 2.7e-22 78.8 0.8 1.4 1 0 0 1 1 1 1 NF-kappa-B-activating protein C-terminal domain RNA_pol_N PF01194.17 CCF75929.1 - 1.1e-29 102.5 0.3 1.4e-29 102.1 0.3 1.2 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit CAMSAP_CH PF11971.8 CCF75929.1 - 0.053 13.3 0.1 0.066 13.1 0.1 1.2 1 0 0 1 1 1 0 CAMSAP CH domain HSP70 PF00012.20 CCF75931.1 - 8.3e-92 308.3 0.7 6.2e-86 288.9 0.0 2.4 3 0 0 3 3 3 2 Hsp70 protein MreB_Mbl PF06723.13 CCF75931.1 - 0.0014 17.5 0.0 0.032 13.1 0.0 2.4 2 1 0 2 2 2 1 MreB/Mbl protein DUF4795 PF16043.5 CCF75931.1 - 0.67 9.5 5.7 0.17 11.4 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4795) HSP90 PF00183.18 CCF75932.1 - 1.8e-223 743.2 29.4 2.4e-223 742.7 29.4 1.1 1 0 0 1 1 1 1 Hsp90 protein HATPase_c PF02518.26 CCF75932.1 - 2.2e-13 50.7 0.2 4.2e-13 49.8 0.2 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 CCF75932.1 - 1.7e-12 47.3 0.5 4.5e-12 46.0 0.5 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF1198 PF06711.11 CCF75932.1 - 0.14 12.3 0.4 0.82 9.7 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1198) SF3a60_bindingd PF12108.8 CCF75932.1 - 0.68 9.9 6.1 6.3 6.8 1.7 2.8 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain TRAP_alpha PF03896.16 CCF75932.1 - 7.1 5.7 12.3 0.31 10.2 6.6 1.5 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit FAM176 PF14851.6 CCF75932.1 - 7.2 6.3 13.3 7.9 6.1 6.4 2.5 2 0 0 2 2 2 0 FAM176 family Arf PF00025.21 CCF75933.1 - 3.7e-75 251.2 0.1 4.2e-75 251.0 0.1 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 CCF75933.1 - 4.8e-15 55.8 0.1 6.8e-15 55.3 0.1 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 CCF75933.1 - 3.1e-13 49.6 1.3 5.1e-08 32.5 0.1 2.2 1 1 1 2 2 2 2 G-protein alpha subunit Ras PF00071.22 CCF75933.1 - 5.2e-13 48.9 0.0 6.1e-13 48.7 0.0 1.1 1 0 0 1 1 1 1 Ras family SRPRB PF09439.10 CCF75933.1 - 9.1e-13 48.0 0.0 1.1e-12 47.7 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 CCF75933.1 - 9.7e-10 38.2 0.0 1.1e-09 38.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 CCF75933.1 - 8.8e-06 25.8 0.1 1.4e-05 25.2 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 CCF75933.1 - 0.0036 16.6 0.3 0.0059 15.9 0.1 1.5 2 0 0 2 2 2 1 6-phosphofructo-2-kinase AAA_33 PF13671.6 CCF75933.1 - 0.14 12.3 0.2 0.26 11.4 0.1 1.7 1 1 0 1 1 1 0 AAA domain DUF4509 PF14970.6 CCF75935.1 - 0.00044 20.2 0.2 0.00044 20.2 0.2 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4509) DUF3107 PF11305.8 CCF75935.1 - 0.016 15.4 0.0 0.093 13.0 0.0 2.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3107) GNAT_acetyltr_2 PF13718.6 CCF75936.1 - 1.2e-71 240.8 0.0 1.3e-70 237.4 0.0 2.1 1 1 0 1 1 1 1 GNAT acetyltransferase 2 Helicase_RecD PF05127.14 CCF75936.1 - 9.8e-50 168.8 0.0 2e-49 167.8 0.0 1.6 1 0 0 1 1 1 1 Helicase DUF1726 PF08351.11 CCF75936.1 - 1.4e-28 98.7 0.1 3e-28 97.6 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) tRNA_bind_2 PF13725.6 CCF75936.1 - 1.5e-28 100.1 0.3 2.5e-28 99.4 0.3 1.4 1 0 0 1 1 1 1 Possible tRNA binding domain AAA_19 PF13245.6 CCF75936.1 - 0.0054 17.1 0.3 0.058 13.7 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 CCF75936.1 - 0.0082 15.9 0.0 0.19 11.4 0.0 2.6 3 0 0 3 3 3 1 AAA domain Acetyltransf_7 PF13508.7 CCF75936.1 - 0.022 15.2 0.0 0.064 13.7 0.0 1.7 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 CCF75936.1 - 0.054 13.7 0.0 0.17 12.2 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) family CENP-H PF05837.12 CCF75937.1 - 0.04 14.3 0.0 0.076 13.4 0.0 1.4 1 1 0 1 1 1 0 Centromere protein H (CENP-H) Poxvirus PF06227.12 CCF75937.1 - 0.097 12.4 5.5 0.12 12.2 5.5 1.2 1 0 0 1 1 1 0 dsDNA Poxvirus LRR_8 PF13855.6 CCF75938.1 - 1.3e-10 40.9 15.2 7.8e-07 28.8 5.0 3.9 3 1 0 3 3 3 2 Leucine rich repeat LRR_4 PF12799.7 CCF75938.1 - 5.3e-10 39.4 24.0 5.7e-07 29.8 8.5 4.5 4 1 1 5 5 5 3 Leucine Rich repeats (2 copies) LRR_1 PF00560.33 CCF75938.1 - 4.1e-05 23.6 17.9 1.9 9.4 0.1 6.5 6 1 0 6 6 6 3 Leucine Rich Repeat LRR_6 PF13516.6 CCF75938.1 - 0.0042 17.0 16.8 1.3 9.3 0.1 5.7 6 0 0 6 6 6 3 Leucine Rich repeat FTH PF01827.27 CCF75938.1 - 0.0047 16.7 0.4 0.021 14.6 0.2 2.0 2 0 0 2 2 2 1 FTH domain LRR_9 PF14580.6 CCF75938.1 - 0.012 15.2 0.7 0.82 9.1 0.2 2.6 3 0 0 3 3 3 0 Leucine-rich repeat DUF4372 PF14294.6 CCF75939.1 - 0.058 13.5 0.1 0.13 12.4 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4372) NOG1_N PF17835.1 CCF75940.1 - 3.5e-50 170.1 0.7 7.5e-50 169.0 0.7 1.6 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 CCF75940.1 - 5e-25 87.0 0.3 2.8e-24 84.6 0.4 2.3 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) NOGCT PF08155.11 CCF75940.1 - 5.7e-24 83.9 4.0 1.4e-23 82.6 4.0 1.6 1 0 0 1 1 1 1 NOGCT (NUC087) domain MMR_HSR1 PF01926.23 CCF75940.1 - 8.3e-18 64.5 0.0 1.9e-17 63.4 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF75940.1 - 1.5e-11 44.0 0.0 4.1e-11 42.7 0.0 1.7 1 0 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 CCF75940.1 - 0.00078 18.9 0.0 0.017 14.5 0.0 2.9 3 0 0 3 3 3 1 ADP-ribosylation factor family KAP PF05804.12 CCF75940.1 - 0.0012 17.0 1.3 0.0019 16.5 1.3 1.1 1 0 0 1 1 1 1 Kinesin-associated protein (KAP) Dynamin_N PF00350.23 CCF75940.1 - 0.0022 18.1 0.9 1.3 9.0 0.0 2.8 2 1 0 3 3 3 2 Dynamin family GTP_EFTU PF00009.27 CCF75940.1 - 0.0024 17.4 0.0 0.012 15.1 0.0 2.0 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 CCF75940.1 - 0.0039 16.5 0.0 0.009 15.4 0.0 1.6 1 0 0 1 1 1 1 AIG1 family Roc PF08477.13 CCF75940.1 - 0.0087 16.3 0.0 0.075 13.3 0.0 2.5 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 CCF75940.1 - 0.0087 16.0 0.4 0.62 9.9 0.0 3.0 3 1 0 3 3 3 1 RsgA GTPase AAA_16 PF13191.6 CCF75940.1 - 0.038 14.4 0.0 0.99 9.8 0.0 2.9 2 1 0 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 CCF75940.1 - 0.071 13.7 0.0 0.49 10.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain ATP_bind_3 PF01171.20 CCF75941.1 - 1.5e-20 73.7 0.0 2.2e-20 73.2 0.0 1.2 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 CCF75941.1 - 0.0002 21.5 0.0 0.00038 20.6 0.0 1.4 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.16 CCF75941.1 - 0.00066 18.6 0.0 0.0009 18.1 0.0 1.2 1 0 0 1 1 1 1 tRNA methyl transferase SUa-2TM PF18179.1 CCF75941.1 - 0.0036 16.7 0.6 0.009 15.3 0.2 1.7 2 0 0 2 2 2 1 SMODS- and Ubiquitin system-associated 2TM effector domain RecR PF02132.15 CCF75941.1 - 0.0089 15.6 1.8 0.0089 15.6 1.8 3.3 4 0 0 4 4 4 1 RecR protein zn-ribbon_14 PF16503.5 CCF75941.1 - 0.013 15.0 5.4 0.013 15.0 5.4 3.1 3 0 0 3 3 3 0 Zinc-ribbon Ras PF00071.22 CCF75942.1 - 1.5e-58 197.0 1.3 1.8e-58 196.7 1.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 CCF75942.1 - 7.8e-37 126.2 0.3 1.1e-36 125.6 0.3 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 CCF75942.1 - 1.7e-17 63.4 0.2 3.5e-17 62.4 0.3 1.5 2 0 0 2 2 2 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 CCF75942.1 - 8.6e-08 31.8 0.2 1.1e-07 31.4 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 CCF75942.1 - 8e-07 28.7 0.2 9.5e-07 28.4 0.2 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 CCF75942.1 - 5.7e-05 22.7 0.1 0.0002 20.9 0.1 1.8 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 CCF75942.1 - 0.00015 21.8 0.1 0.00022 21.3 0.1 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase TetR_C_16 PF17920.1 CCF75942.1 - 0.0025 18.0 0.0 0.0037 17.5 0.0 1.3 1 0 0 1 1 1 1 Tetracyclin repressor-like, C-terminal domain CPT PF07931.12 CCF75942.1 - 0.0066 16.3 0.0 0.0083 16.0 0.0 1.3 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein G-alpha PF00503.20 CCF75942.1 - 0.022 13.9 1.9 0.21 10.7 0.1 2.3 1 1 1 2 2 2 0 G-protein alpha subunit AAA_15 PF13175.6 CCF75942.1 - 0.026 14.2 1.4 2.2 7.9 0.1 2.1 1 1 0 2 2 2 0 AAA ATPase domain AAA_24 PF13479.6 CCF75942.1 - 0.029 14.1 0.4 0.045 13.5 0.4 1.7 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 CCF75942.1 - 0.04 13.4 0.2 0.066 12.7 0.2 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 CCF75942.1 - 0.071 13.6 0.4 2.1 8.9 0.5 2.2 1 1 0 1 1 1 0 ABC transporter PduV-EutP PF10662.9 CCF75942.1 - 0.21 11.3 1.6 0.24 11.1 0.5 1.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Imm8 PF15586.6 CCF75944.1 - 0.09 12.8 0.0 0.097 12.7 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 8 ATP-synt_DE_N PF02823.16 CCF75945.1 - 4.2e-14 52.2 0.0 5e-14 52.0 0.0 1.1 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain COX2_TM PF02790.15 CCF75946.1 - 0.0037 17.4 0.1 0.0037 17.4 0.1 1.0 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, transmembrane domain PrmA PF06325.13 CCF75947.1 - 0.00013 21.5 0.0 0.00031 20.2 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 CCF75947.1 - 0.003 17.1 0.1 0.0091 15.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain PRMT5 PF05185.16 CCF75947.1 - 0.013 15.4 0.0 0.025 14.4 0.0 1.5 1 0 0 1 1 1 0 PRMT5 arginine-N-methyltransferase Methyltransf_25 PF13649.6 CCF75947.1 - 0.016 15.9 0.0 0.49 11.1 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain A_deaminase PF00962.22 CCF75948.1 - 7.3e-91 304.9 0.0 1.3e-90 304.1 0.0 1.4 1 1 0 1 1 1 1 Adenosine/AMP deaminase Daxx PF03344.15 CCF75948.1 - 0.029 14.4 0.2 0.25 11.4 0.0 2.4 3 0 0 3 3 3 0 Daxx N-terminal Rassf1C-interacting domain Prenyltrans PF00432.21 CCF75949.1 - 1.1e-26 92.3 6.8 4.3e-11 42.3 0.8 5.3 5 0 0 5 5 5 4 Prenyltransferase and squalene oxidase repeat SSXT PF05030.12 CCF75950.1 - 0.00094 18.8 0.2 0.00094 18.8 0.2 2.1 3 0 0 3 3 3 1 SSXT protein (N-terminal region) PNP_UDP_1 PF01048.20 CCF75951.1 - 3.9e-33 114.7 0.0 4.2e-33 114.5 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily PACT_coil_coil PF10495.9 CCF75952.1 - 0.063 13.9 0.1 0.17 12.5 0.1 1.7 1 0 0 1 1 1 0 Pericentrin-AKAP-450 domain of centrosomal targeting protein TPR_2 PF07719.17 CCF75953.1 - 0.061 13.5 0.1 1.4 9.2 0.0 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat OrsD PF12013.8 CCF75953.1 - 0.5 10.8 4.2 0.81 10.1 1.3 2.5 2 1 1 3 3 3 0 Orsellinic acid/F9775 biosynthesis cluster protein D PITH PF06201.13 CCF75954.1 - 1.4e-15 57.9 0.2 1.7e-15 57.5 0.2 1.1 1 0 0 1 1 1 1 PITH domain RRM_1 PF00076.22 CCF75957.1 - 1.1e-34 118.1 0.2 3.5e-16 58.8 0.1 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 CCF75957.1 - 6.2e-08 32.4 0.0 5.3e-06 26.2 0.0 2.6 2 1 0 2 2 2 1 Occluded RNA-recognition motif Nup35_RRM_2 PF14605.6 CCF75957.1 - 5.2e-07 29.6 0.1 2.6e-05 24.1 0.0 2.6 2 1 0 2 2 2 1 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 CCF75957.1 - 0.046 13.8 0.1 0.17 12.0 0.0 2.0 2 1 0 2 2 2 0 RNA recognition motif CDC45 PF02724.14 CCF75958.1 - 0.31 9.3 3.6 0.39 9.0 3.6 1.1 1 0 0 1 1 1 0 CDC45-like protein Orf78 PF06024.12 CCF75958.1 - 1.9 8.9 8.6 4.7 7.6 0.5 2.8 2 1 1 3 3 3 0 Orf78 (ac78) DXP_redisom_C PF08436.12 CCF75960.1 - 0.065 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain MobA_MobL PF03389.15 CCF75960.1 - 0.57 9.9 5.3 0.77 9.4 5.3 1.1 1 0 0 1 1 1 0 MobA/MobL family AP2 PF00847.20 CCF75961.1 - 0.0004 20.5 1.1 0.0008 19.6 1.1 1.4 1 0 0 1 1 1 1 AP2 domain ATP-synt_C PF00137.21 CCF75963.1 - 7.2e-09 35.9 6.9 1.1e-08 35.3 6.9 1.3 1 0 0 1 1 1 1 ATP synthase subunit C Rtt106 PF08512.12 CCF75964.1 - 1.4e-22 79.9 0.1 7.8e-21 74.3 0.1 2.7 2 0 0 2 2 2 1 Histone chaperone Rttp106-like POB3_N PF17292.2 CCF75964.1 - 6.5e-22 77.8 1.3 1.3e-19 70.4 0.1 2.9 3 0 0 3 3 3 1 POB3-like N-terminal PH domain SSrecog PF03531.14 CCF75964.1 - 8.9e-19 67.2 0.0 8.9e-19 67.2 0.0 2.4 3 0 0 3 3 3 1 Structure-specific recognition protein (SSRP1) TFIIA PF03153.13 CCF75964.1 - 0.0015 18.6 4.6 0.002 18.2 4.6 1.3 1 0 0 1 1 1 1 Transcription factor IIA, alpha/beta subunit PPP4R2 PF09184.11 CCF75964.1 - 0.37 10.3 13.0 0.58 9.7 13.0 1.3 1 0 0 1 1 1 0 PPP4R2 CDC45 PF02724.14 CCF75964.1 - 9.1 4.4 13.4 12 4.0 13.4 1.1 1 0 0 1 1 1 0 CDC45-like protein Pkinase PF00069.25 CCF75965.1 - 4.6e-46 157.3 0.0 6e-46 156.9 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75965.1 - 5.9e-27 94.6 0.0 8.5e-27 94.1 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 CCF75965.1 - 0.0003 19.7 0.0 0.00048 19.0 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase zf-ribbon_3 PF13248.6 CCF75965.1 - 0.018 14.4 1.4 0.044 13.2 1.4 1.7 1 0 0 1 1 1 0 zinc-ribbon domain Abhydrolase_1 PF00561.20 CCF75966.1 - 0.038 13.6 0.0 3.1 7.4 0.0 2.2 2 0 0 2 2 2 0 alpha/beta hydrolase fold RACo_C_ter PF14574.6 CCF75966.1 - 0.3 10.1 0.0 0.45 9.5 0.0 1.1 1 0 0 1 1 1 0 C-terminal domain of RACo the ASKHA domain PUF PF00806.19 CCF75967.1 - 4.9e-08 32.2 0.2 0.013 15.2 0.0 4.8 5 0 0 5 5 5 3 Pumilio-family RNA binding repeat DUF445 PF04286.12 CCF75967.1 - 0.0024 17.7 1.5 0.011 15.6 0.7 2.2 1 1 0 2 2 2 1 Protein of unknown function (DUF445) Exo_endo_phos_2 PF14529.6 CCF75967.1 - 0.037 13.9 0.0 0.15 11.9 0.0 2.2 1 0 0 1 1 1 0 Endonuclease-reverse transcriptase Rrf2 PF02082.20 CCF75967.1 - 0.15 12.5 0.0 1.2 9.6 0.0 2.5 2 1 1 3 3 3 0 Transcriptional regulator LCM PF04072.14 CCF75968.1 - 3.2e-26 92.5 0.0 4.8e-26 91.9 0.0 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase Pkinase PF00069.25 CCF75969.1 - 5.5e-78 262.0 0.0 7.6e-78 261.5 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF75969.1 - 3.3e-40 138.0 0.0 4.8e-40 137.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 CCF75969.1 - 1.7e-25 86.6 8.8 2.6e-05 23.4 0.0 4.8 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 CCF75969.1 - 1.5e-21 74.4 3.9 1.2e-05 24.9 0.0 4.9 4 0 0 4 4 4 4 EF-hand domain EF-hand_7 PF13499.6 CCF75969.1 - 1e-20 73.9 6.9 1.5e-10 41.4 0.4 3.2 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 CCF75969.1 - 7.3e-17 60.0 5.7 2.7e-05 23.5 0.1 4.6 4 0 0 4 4 4 3 EF hand EF-hand_8 PF13833.6 CCF75969.1 - 6.1e-15 54.8 11.1 0.00066 19.5 0.0 5.2 4 1 1 5 5 5 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 CCF75969.1 - 7.9e-08 32.6 3.9 8.8e-05 22.8 0.5 3.1 3 1 0 3 3 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 CCF75969.1 - 4.7e-07 29.7 5.3 0.0097 15.8 0.6 3.7 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand Kinase-like PF14531.6 CCF75969.1 - 1.5e-05 24.5 0.1 0.00017 21.0 0.1 2.3 1 1 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 CCF75969.1 - 0.00045 19.1 0.0 0.00068 18.5 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 CCF75969.1 - 0.01 15.2 0.1 0.021 14.2 0.1 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF75969.1 - 0.023 14.6 0.0 0.074 13.0 0.0 1.7 1 1 1 2 2 2 0 Phosphotransferase enzyme family EF-hand_9 PF14658.6 CCF75969.1 - 0.081 13.3 0.7 2 8.8 0.1 3.0 2 1 0 2 2 2 0 EF-hand domain SBDS PF01172.18 CCF75969.1 - 0.13 12.3 0.2 1 9.5 0.1 2.5 2 1 0 2 2 2 0 Shwachman-Bodian-Diamond syndrome (SBDS) protein Eapp_C PF10238.9 CCF75970.1 - 1.3e-09 38.3 0.6 6.1e-06 26.4 0.0 2.3 1 1 1 2 2 2 2 E2F-associated phosphoprotein Ribosomal_S26e PF01283.19 CCF75971.1 - 4.1e-49 165.5 7.9 4.5e-49 165.4 7.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e SRP19 PF01922.17 CCF75971.1 - 0.002 19.0 0.2 0.0031 18.4 0.2 1.2 1 0 0 1 1 1 1 SRP19 protein AAA PF00004.29 CCF75973.1 - 2.9e-14 53.6 0.0 7.6e-14 52.3 0.0 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 CCF75973.1 - 1.2e-12 48.0 0.0 1.3e-11 44.6 0.0 2.3 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rep_fac_C PF08542.11 CCF75973.1 - 3.2e-12 46.7 0.0 1.1e-11 45.0 0.0 2.0 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA_30 PF13604.6 CCF75973.1 - 9.7e-06 25.4 0.0 1.6e-05 24.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 CCF75973.1 - 5.2e-05 22.9 0.0 0.026 14.1 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_19 PF13245.6 CCF75973.1 - 5.9e-05 23.4 0.0 0.00031 21.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 CCF75973.1 - 7.7e-05 22.6 0.0 0.00028 20.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 CCF75973.1 - 0.00016 22.0 0.1 0.0077 16.5 0.1 2.7 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 CCF75973.1 - 0.00021 21.3 0.1 0.0012 18.9 0.1 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Rad17 PF03215.15 CCF75973.1 - 0.00028 20.9 0.0 0.00046 20.2 0.0 1.5 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 CCF75973.1 - 0.0003 21.2 0.0 0.001 19.5 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 CCF75973.1 - 0.0011 18.8 0.0 0.0052 16.5 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 CCF75973.1 - 0.0012 18.6 0.0 0.0039 16.9 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_assoc_2 PF16193.5 CCF75973.1 - 0.0015 18.8 0.0 0.0038 17.5 0.0 1.7 1 0 0 1 1 1 1 AAA C-terminal domain AAA_14 PF13173.6 CCF75973.1 - 0.0019 18.3 0.0 0.0049 16.9 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_18 PF13238.6 CCF75973.1 - 0.0025 18.4 0.0 0.0047 17.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain DUF2075 PF09848.9 CCF75973.1 - 0.0031 16.8 0.0 0.0049 16.2 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) SNF2_N PF00176.23 CCF75973.1 - 0.0046 15.7 0.0 0.0073 15.1 0.0 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain PhoH PF02562.16 CCF75973.1 - 0.0048 16.4 0.0 0.063 12.7 0.0 2.3 2 0 0 2 2 2 1 PhoH-like protein DEAD PF00270.29 CCF75973.1 - 0.005 16.6 0.1 0.6 9.8 0.0 2.5 2 1 1 3 3 3 1 DEAD/DEAH box helicase ResIII PF04851.15 CCF75973.1 - 0.0082 16.2 0.0 0.11 12.5 0.0 2.4 1 1 2 3 3 3 1 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 CCF75973.1 - 0.015 15.1 0.0 0.048 13.4 0.0 1.8 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA_helicase PF00910.22 CCF75973.1 - 0.016 15.6 0.0 0.061 13.7 0.0 2.0 2 0 0 2 2 1 0 RNA helicase AAA_23 PF13476.6 CCF75973.1 - 0.018 15.6 0.0 0.036 14.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 CCF75973.1 - 0.021 15.1 0.0 0.038 14.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 CCF75973.1 - 0.021 15.0 0.0 0.078 13.1 0.0 2.0 1 1 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 CCF75973.1 - 0.021 14.2 0.1 0.23 10.8 0.0 2.3 2 1 0 2 2 2 0 Magnesium chelatase, subunit ChlI KTI12 PF08433.10 CCF75973.1 - 0.028 13.9 0.0 0.052 13.0 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 TIP49 PF06068.13 CCF75973.1 - 0.069 12.4 0.0 0.24 10.6 0.0 1.9 2 0 0 2 2 2 0 TIP49 P-loop domain TPR_6 PF13174.6 CCF75973.1 - 0.1 13.3 0.1 15 6.5 0.0 3.3 3 0 0 3 3 2 0 Tetratricopeptide repeat Rad60-SLD_2 PF13881.6 CCF75974.1 - 0.043 13.9 0.0 0.07 13.2 0.0 1.5 2 0 0 2 2 2 0 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 CCF75974.1 - 0.15 11.8 0.0 0.45 10.3 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin family Mt_ATP-synt_B PF05405.14 CCF75975.1 - 0.00088 18.9 5.8 0.00088 18.9 5.8 3.2 4 0 0 4 4 4 1 Mitochondrial ATP synthase B chain precursor (ATP-synt_B) Pox_A21 PF05323.12 CCF75975.1 - 0.06 13.9 3.1 4.7 7.8 0.1 2.5 2 0 0 2 2 2 0 Poxvirus A21 Protein RNA_pol PF00940.19 CCF75976.1 - 8.5e-131 436.6 0.0 1.7e-130 435.6 0.0 1.6 1 1 0 1 1 1 1 DNA-dependent RNA polymerase RPOL_N PF14700.6 CCF75976.1 - 4e-15 56.0 0.0 3.9e-12 46.2 0.0 3.0 2 1 1 3 3 3 2 DNA-directed RNA polymerase N-terminal RB_B PF01857.20 CCF75976.1 - 0.21 11.6 1.3 0.68 10.0 1.3 1.9 1 0 0 1 1 1 0 Retinoblastoma-associated protein B domain SHOCT PF09851.9 CCF75978.1 - 0.18 11.6 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Short C-terminal domain zf-C3HC4_3 PF13920.6 CCF75979.1 - 4e-08 33.0 12.8 8.7e-08 31.9 12.8 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 CCF75979.1 - 0.00059 19.6 13.7 0.0015 18.4 13.7 1.7 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Cep57_CLD PF14073.6 CCF75979.1 - 0.016 15.3 0.4 0.034 14.2 0.4 1.5 1 0 0 1 1 1 0 Centrosome localisation domain of Cep57 Agenet PF05641.12 CCF75979.1 - 0.11 13.0 0.0 0.33 11.5 0.0 1.8 1 0 0 1 1 1 0 Agenet domain zf-RING_5 PF14634.6 CCF75979.1 - 4.7 7.2 15.1 14 5.8 15.1 1.8 1 0 0 1 1 1 0 zinc-RING finger domain DUF2039 PF10217.9 CCF75979.1 - 5.4 7.4 10.0 1.1 9.7 5.7 2.1 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2039) Snf7 PF03357.21 CCF75980.1 - 9.3e-19 67.7 12.5 1.2e-18 67.3 12.5 1.1 1 0 0 1 1 1 1 Snf7 TPR_22 PF18833.1 CCF75980.1 - 0.024 14.8 0.4 0.055 13.6 0.1 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat DDE_Tnp_1_2 PF13586.6 CCF75980.1 - 0.049 14.0 0.1 0.37 11.2 0.1 2.2 2 0 0 2 2 2 0 Transposase DDE domain DUF2408 PF10303.9 CCF75980.1 - 0.18 12.4 5.3 0.45 11.1 5.2 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) NuA4 PF09340.10 CCF75980.1 - 0.4 10.6 2.4 2.6 8.0 0.2 2.5 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 FadA PF09403.10 CCF75980.1 - 1.2 9.6 10.9 4.5 7.8 1.5 2.4 1 1 0 2 2 2 0 Adhesion protein FadA SUI1 PF01253.22 CCF75981.1 - 1.8e-23 82.8 0.1 2.3e-23 82.5 0.1 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 GIDA PF01134.22 CCF75982.1 - 3.2e-110 368.9 0.0 4.2e-110 368.5 0.0 1.1 1 0 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 CCF75982.1 - 4.5e-52 177.3 0.0 7.4e-52 176.6 0.0 1.3 1 0 0 1 1 1 1 GidA associated domain TIP41 PF04176.13 CCF75983.1 - 0.099 12.1 0.0 0.22 11.0 0.0 1.5 1 0 0 1 1 1 0 TIP41-like family VirE1 PF12189.8 CCF75983.1 - 0.1 12.7 1.4 21 5.3 0.1 2.8 2 0 0 2 2 2 0 Single-strand DNA-binding protein TSP_1 PF00090.19 CCF75984.1 - 1.6e-05 25.0 5.2 5.5e-05 23.3 5.2 2.0 1 0 0 1 1 1 1 Thrombospondin type 1 domain Tme5_EGF_like PF09064.10 CCF75984.1 - 1.6 8.7 7.0 5.5 7.0 1.5 3.1 2 0 0 2 2 2 0 Thrombomodulin like fifth domain, EGF-like WD40 PF00400.32 CCF75985.1 - 4.1e-10 40.1 2.7 0.19 12.6 0.3 6.5 6 1 1 7 7 7 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 CCF75985.1 - 6e-06 26.5 0.0 0.089 13.1 0.0 4.2 1 1 3 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain NARP1 PF12569.8 CCF75986.1 - 8.3e-42 143.8 19.4 9.1e-27 94.1 7.2 4.0 3 1 0 3 3 3 3 NMDA receptor-regulated protein 1 TPR_2 PF07719.17 CCF75986.1 - 1.7e-11 43.3 4.7 0.00013 21.9 0.0 7.4 8 0 0 8 8 7 2 Tetratricopeptide repeat TPR_8 PF13181.6 CCF75986.1 - 6.7e-10 38.4 7.9 0.00017 21.6 0.0 7.2 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 CCF75986.1 - 2.2e-08 34.5 1.7 0.065 13.7 0.0 4.3 3 1 0 4 4 4 3 Tetratricopeptide repeat TPR_15 PF13429.6 CCF75986.1 - 4.5e-08 32.7 0.0 0.0039 16.4 0.0 2.4 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_14 PF13428.6 CCF75986.1 - 1.6e-07 31.6 0.0 0.23 12.4 0.0 5.9 4 1 2 6 6 6 2 Tetratricopeptide repeat TPR_1 PF00515.28 CCF75986.1 - 1.5e-06 27.7 8.7 6.2e-05 22.7 0.0 5.2 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF75986.1 - 6.8e-06 26.3 3.5 0.057 13.7 0.0 5.4 6 1 1 7 7 6 2 Tetratricopeptide repeat TPR_16 PF13432.6 CCF75986.1 - 8.4e-05 23.1 0.0 1.7 9.3 0.0 3.9 3 2 0 3 3 3 1 Tetratricopeptide repeat TPR_10 PF13374.6 CCF75986.1 - 0.00015 21.5 0.0 7.2 6.6 0.0 4.7 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_11 PF13414.6 CCF75986.1 - 0.0003 20.4 2.0 0.01 15.5 0.0 4.2 5 1 0 5 5 5 1 TPR repeat TPR_17 PF13431.6 CCF75986.1 - 0.0016 18.7 0.3 0.34 11.4 0.0 4.4 5 0 0 5 5 4 1 Tetratricopeptide repeat TPR_6 PF13174.6 CCF75986.1 - 0.002 18.7 0.0 2.8 8.8 0.0 4.4 3 0 0 3 3 3 1 Tetratricopeptide repeat ANAPC3 PF12895.7 CCF75986.1 - 0.0021 18.2 17.1 0.0027 17.9 1.6 4.8 4 1 1 5 5 5 2 Anaphase-promoting complex, cyclosome, subunit 3 YfiO PF13525.6 CCF75986.1 - 0.0045 16.7 2.1 2.9 7.6 0.0 3.7 3 1 1 4 4 4 1 Outer membrane lipoprotein TPR_7 PF13176.6 CCF75986.1 - 0.026 14.5 0.7 0.79 9.9 0.0 3.7 5 0 0 5 5 3 0 Tetratricopeptide repeat ChAPs PF09295.10 CCF75986.1 - 0.03 13.3 4.6 2.4 7.1 0.1 3.2 3 0 0 3 3 3 0 ChAPs (Chs5p-Arf1p-binding proteins) Fis1_TPR_C PF14853.6 CCF75986.1 - 0.034 14.2 6.0 0.65 10.1 0.1 4.6 6 0 0 6 6 4 0 Fis1 C-terminal tetratricopeptide repeat Cas_Cas02710 PF09670.10 CCF75986.1 - 0.037 12.8 1.2 0.93 8.2 0.1 2.5 2 0 0 2 2 2 0 CRISPR-associated protein (Cas_Cas02710) Tfb2 PF03849.14 CCF75987.1 - 1.2e-57 195.6 0.7 9.7e-57 192.5 0.7 2.3 1 1 0 1 1 1 1 Transcription factor Tfb2 Tfb2_C PF18307.1 CCF75987.1 - 8.5e-07 29.3 1.0 2.7e-06 27.7 1.0 2.0 1 0 0 1 1 1 1 Transcription factor Tfb2 (p52) C-terminal domain Helicase_C_3 PF13625.6 CCF75987.1 - 1.2e-05 25.5 0.0 2.6e-05 24.4 0.0 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain tRNA_int_end_N2 PF12928.7 CCF75987.1 - 0.093 12.9 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 tRNA-splicing endonuclease subunit sen54 N-term PH PF00169.29 CCF75988.1 - 9.5e-05 22.9 0.5 0.00022 21.7 0.1 1.7 1 1 1 2 2 2 1 PH domain Synaptobrevin PF00957.21 CCF75989.1 - 4.9e-07 29.5 0.4 9.8e-07 28.5 0.4 1.5 1 0 0 1 1 1 1 Synaptobrevin I_LWEQ PF01608.17 CCF75989.1 - 0.0082 16.4 0.0 0.015 15.6 0.0 1.4 1 0 0 1 1 1 1 I/LWEQ domain Mur_ligase_M PF08245.12 CCF75990.1 - 1.6e-10 41.3 0.0 2.3e-10 40.8 0.0 1.3 1 0 0 1 1 1 1 Mur ligase middle domain CLP1_N PF16573.5 CCF75991.1 - 4.9e-19 68.3 0.0 9.6e-19 67.4 0.0 1.5 1 0 0 1 1 1 1 N-terminal beta-sandwich domain of polyadenylation factor CLP1_P PF16575.5 CCF75991.1 - 8.7e-19 68.0 0.4 4.3e-16 59.2 0.2 3.1 1 1 1 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_16 PF13191.6 CCF75991.1 - 0.034 14.5 0.0 0.058 13.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain Med7 PF05983.11 CCF75992.1 - 1.5e-10 41.5 16.4 4.3e-08 33.5 16.4 2.0 1 1 0 1 1 1 1 MED7 protein Ribosomal_L4 PF00573.22 CCF75993.1 - 5.7e-49 166.4 0.0 7.9e-49 166.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Sec61_beta PF03911.16 CCF75995.1 - 9.5e-12 44.8 0.1 1.2e-11 44.5 0.1 1.1 1 0 0 1 1 1 1 Sec61beta family RNase_PH_C PF03725.15 CCF75998.1 - 1.6e-05 24.8 0.8 0.0014 18.6 0.2 2.8 3 0 0 3 3 3 2 3' exoribonuclease family, domain 2 DNA_pol_B PF00136.21 CCF75999.1 - 4.1e-126 421.4 1.1 5.5e-126 420.9 1.1 1.2 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 CCF75999.1 - 4.3e-74 249.7 3.2 9.1e-74 248.6 3.2 1.6 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain zf-C4pol PF14260.6 CCF75999.1 - 4.8e-15 55.8 10.8 1e-14 54.7 10.8 1.6 1 0 0 1 1 1 1 C4-type zinc-finger of DNA polymerase delta DNA_pol_B_exo2 PF10108.9 CCF75999.1 - 0.065 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB zinc-ribbons_6 PF07191.12 CCF75999.1 - 0.14 12.1 7.5 1.4 8.9 0.6 2.5 2 0 0 2 2 2 0 zinc-ribbons C1_1 PF00130.22 CCF75999.1 - 0.36 10.7 3.2 1.5 8.8 3.2 2.0 1 1 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Noc2 PF03715.13 CCF76000.1 - 6.1e-38 130.8 3.0 1.9e-37 129.2 3.0 1.7 1 1 0 1 1 1 1 Noc2p family HTH_16 PF12645.7 CCF76000.1 - 0.64 10.1 3.5 1.4 9.0 0.0 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain CwfJ_C_1 PF04677.15 CCF76001.1 - 2.4e-14 53.2 1.0 4.4e-14 52.4 0.3 1.8 2 0 0 2 2 2 1 Protein similar to CwfJ C-terminus 1 RRM_1 PF00076.22 CCF76001.1 - 3.6e-09 36.3 0.1 1.5e-08 34.4 0.0 2.1 3 0 0 3 3 3 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CwfJ_C_2 PF04676.14 CCF76001.1 - 0.00061 20.6 0.1 0.0013 19.5 0.1 1.7 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 2 DUF3767 PF12597.8 CCF76001.1 - 0.2 11.5 1.0 0.55 10.1 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3767) Rpr2 PF04032.16 CCF76004.1 - 5.2e-17 61.9 0.6 6.7e-17 61.6 0.6 1.1 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain zf-U1 PF06220.12 CCF76004.1 - 0.023 14.5 0.3 0.23 11.3 0.1 2.3 2 0 0 2 2 2 0 U1 zinc finger Toxin_trans PF07952.12 CCF76004.1 - 0.025 13.7 0.7 0.029 13.5 0.7 1.1 1 0 0 1 1 1 0 Clostridium neurotoxin, Translocation domain DnaGprimase_HBD PF16730.5 CCF76004.1 - 0.1 12.7 0.4 0.13 12.3 0.4 1.1 1 0 0 1 1 1 0 DnaG-primase C-terminal, helicase-binding domain NapB PF03892.14 CCF76004.1 - 2.9 7.9 5.2 1.2 9.2 0.3 2.5 2 1 1 3 3 3 0 Nitrate reductase cytochrome c-type subunit (NapB) RNase_PH PF01138.21 CCF76005.1 - 2.2e-07 31.4 0.0 3.7e-07 30.7 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 CCF76005.1 - 0.00016 21.6 0.1 0.00032 20.7 0.1 1.5 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 CdiI_2 PF18593.1 CCF76006.1 - 0.035 14.7 0.2 5.4 7.7 0.1 2.9 2 0 0 2 2 2 0 CdiI immunity protein U79_P34 PF03064.16 CCF76006.1 - 0.2 11.0 0.6 15 4.8 0.0 2.4 2 0 0 2 2 2 0 HSV U79 / HCMV P34 Mito_carr PF00153.27 CCF76008.1 - 1.8e-49 165.6 1.1 4.1e-16 58.7 0.0 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein NTP_transferase PF00483.23 CCF76010.1 - 3.3e-48 164.4 0.0 4.7e-48 163.9 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 CCF76010.1 - 1.2e-10 40.7 8.5 2e-08 33.6 3.0 3.2 2 0 0 2 2 2 2 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 CCF76010.1 - 3e-07 30.9 0.0 4.5e-07 30.4 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 CCF76010.1 - 0.0036 17.3 0.0 0.0067 16.4 0.0 1.4 1 0 0 1 1 1 1 Cytidylyltransferase Hexapep_2 PF14602.6 CCF76010.1 - 0.0062 16.3 4.5 0.0062 16.3 4.5 2.5 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 CCF76010.1 - 0.07 12.1 0.2 1.1 8.2 0.1 2.2 2 0 0 2 2 2 0 L-fucokinase IspD PF01128.19 CCF76010.1 - 0.077 12.7 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4974 PF16344.5 CCF76010.1 - 0.13 12.3 0.2 0.33 11.0 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) DUF4954 PF16314.5 CCF76010.1 - 0.21 9.7 6.8 1 7.4 1.2 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4954) DnaJ PF00226.31 CCF76011.1 - 1.1e-20 73.5 0.0 2.6e-20 72.3 0.0 1.7 1 0 0 1 1 1 1 DnaJ domain Thioredoxin PF00085.20 CCF76011.1 - 6.2e-10 39.0 0.0 1.4e-09 37.9 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin DUF4181 PF13789.6 CCF76011.1 - 0.068 13.4 0.6 0.14 12.5 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4181) DUF1033 PF06279.11 CCF76011.1 - 0.079 13.1 0.3 0.4 10.9 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1033) Bromo_TP_like PF17027.5 CCF76011.1 - 0.2 11.8 2.6 0.19 11.9 0.2 2.1 2 0 0 2 2 2 0 Histone-fold protein GatB_N PF02934.15 CCF76012.1 - 2.3e-57 194.5 0.9 3.2e-51 174.3 0.6 2.1 2 0 0 2 2 2 2 GatB/GatE catalytic domain GatB_Yqey PF02637.18 CCF76012.1 - 1.3e-12 47.8 0.2 4.6e-10 39.6 0.0 2.4 2 0 0 2 2 2 2 GatB domain Acetyltransf_1 PF00583.25 CCF76013.1 - 4.3e-11 43.1 0.0 5.3e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 CCF76013.1 - 3.4e-08 33.5 0.0 5.1e-08 32.9 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 CCF76013.1 - 1.4e-06 28.6 0.0 1.9e-06 28.2 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 CCF76013.1 - 0.013 15.6 0.0 0.021 14.9 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 CCF76013.1 - 0.078 12.5 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_3 PF13302.7 CCF76013.1 - 0.12 13.0 0.0 0.15 12.7 0.0 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AT_hook PF02178.19 CCF76015.1 - 0.053 13.4 13.8 0.46 10.5 3.1 2.4 2 0 0 2 2 2 0 AT hook motif NAD_binding_1 PF00175.21 CCF76016.1 - 4.5e-18 65.9 0.0 9e-18 64.9 0.0 1.5 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 CCF76016.1 - 2.3e-05 24.7 0.0 0.00027 21.2 0.0 2.2 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 CCF76016.1 - 0.00096 19.3 0.0 0.034 14.3 0.0 2.4 1 1 1 2 2 2 1 Ferric reductase NAD binding domain UPF0086 PF01868.16 CCF76017.1 - 2.7e-19 68.8 0.0 4.2e-19 68.2 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function UPF0086 HECT PF00632.25 CCF76018.1 - 1.1e-42 146.6 0.0 2.3e-42 145.5 0.0 1.4 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) Sod_Fe_C PF02777.18 CCF76019.1 - 4.4e-28 97.4 0.0 1.5e-27 95.8 0.0 1.8 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 CCF76019.1 - 1.4e-18 67.1 4.6 2.8e-18 66.1 4.6 1.5 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain A_deaminase PF00962.22 CCF76019.1 - 0.13 11.5 0.1 0.19 11.0 0.1 1.2 1 0 0 1 1 1 0 Adenosine/AMP deaminase SANT_DAMP1_like PF16282.5 CCF76020.1 - 2.9e-23 81.8 3.6 2.9e-23 81.8 3.6 2.0 2 0 0 2 2 2 1 SANT/Myb-like domain of DAMP1 Myb_DNA-bind_6 PF13921.6 CCF76020.1 - 0.046 14.0 1.4 0.097 12.9 0.3 2.2 2 0 0 2 2 2 0 Myb-like DNA-binding domain CDP-OH_P_transf PF01066.21 CCF76021.1 - 3.9e-11 43.6 1.3 3.9e-11 43.6 1.3 4.4 3 2 0 3 3 3 1 CDP-alcohol phosphatidyltransferase OPA3 PF07047.12 CCF76022.1 - 2.4e-29 101.6 0.1 3.4e-29 101.2 0.1 1.2 1 0 0 1 1 1 1 Optic atrophy 3 protein (OPA3) TPR_MLP1_2 PF07926.12 CCF76024.1 - 0.11 12.6 14.3 0.34 11.0 14.3 1.8 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein Inhibitor_I24 PF10465.9 CCF76024.1 - 0.15 12.1 4.6 4.3 7.3 0.2 3.0 2 1 2 4 4 4 0 PinA peptidase inhibitor G-gamma PF00631.22 CCF76024.1 - 0.34 10.9 6.3 3.1 7.9 0.5 3.9 3 1 0 3 3 3 0 GGL domain DHR10 PF18595.1 CCF76024.1 - 0.68 10.0 10.4 0.27 11.3 3.7 2.5 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain SlyX PF04102.12 CCF76024.1 - 0.72 10.5 3.6 21 5.8 0.5 3.4 1 1 2 3 3 3 0 SlyX SOGA PF11365.8 CCF76024.1 - 0.77 10.9 12.9 0.54 11.4 3.4 2.9 2 1 1 3 3 3 0 Protein SOGA DUF745 PF05335.13 CCF76024.1 - 1.1 8.9 4.0 2 8.1 4.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF745) PCRF PF03462.18 CCF76024.1 - 1.4 8.8 8.6 1.3 8.8 6.8 1.9 2 0 0 2 2 2 0 PCRF domain LMBR1 PF04791.16 CCF76024.1 - 2.4 6.9 4.6 2.6 6.8 4.6 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein HIP1_clath_bdg PF16515.5 CCF76024.1 - 5.2 7.8 12.9 14 6.3 8.4 2.5 1 1 1 2 2 2 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Uso1_p115_C PF04871.13 CCF76024.1 - 5.8 7.3 14.3 4.1 7.8 4.2 2.3 1 1 1 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region TPR_17 PF13431.6 CCF76026.1 - 2.2e-06 27.6 7.7 0.27 11.7 0.0 6.6 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_2 PF07719.17 CCF76026.1 - 5e-05 23.1 0.1 5 7.5 0.0 7.0 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_1 PF00515.28 CCF76026.1 - 6.3e-05 22.6 0.1 1.9 8.4 0.0 5.7 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_19 PF14559.6 CCF76026.1 - 0.00033 21.1 0.0 4.8 7.8 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_7 PF13176.6 CCF76026.1 - 0.00087 19.2 1.7 0.53 10.4 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 CCF76026.1 - 0.0014 18.7 0.4 39 4.8 0.0 5.7 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 CCF76026.1 - 0.0016 18.9 0.6 18 6.3 0.0 5.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_11 PF13414.6 CCF76026.1 - 0.042 13.5 0.8 7.3 6.4 0.0 4.7 6 0 0 6 6 6 0 TPR repeat TPR_12 PF13424.6 CCF76026.1 - 0.23 11.8 7.3 17 5.8 0.0 6.0 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_14 PF13428.6 CCF76026.1 - 0.64 11.0 2.8 2.6e+02 2.9 0.0 5.5 7 1 1 8 8 8 0 Tetratricopeptide repeat RAP PF08373.10 CCF76027.1 - 0.0014 18.7 0.1 0.0034 17.4 0.1 1.6 1 0 0 1 1 1 1 RAP domain NifU PF01106.17 CCF76028.1 - 3.5e-20 71.9 0.4 6.8e-20 71.0 0.3 1.5 2 0 0 2 2 2 1 NifU-like domain HSR PF03172.13 CCF76029.1 - 0.03 14.5 1.7 0.099 12.8 0.1 2.5 3 0 0 3 3 3 0 HSR domain PP2C PF00481.21 CCF76030.1 - 4.6e-48 164.1 0.0 5.3e-48 163.9 0.0 1.0 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 CCF76030.1 - 0.01 15.5 0.0 0.016 14.8 0.0 1.5 1 1 0 1 1 1 0 Protein phosphatase 2C HPIH PF13323.6 CCF76030.1 - 0.047 13.5 0.0 0.077 12.8 0.0 1.3 1 0 0 1 1 1 0 N-terminal domain with HPIH motif MIP PF00230.20 CCF76031.1 - 1.5e-05 24.8 9.8 8.9e-05 22.3 9.8 2.1 1 1 0 1 1 1 1 Major intrinsic protein PWI PF01480.17 CCF76032.1 - 1.1e-25 89.7 0.8 1.8e-25 89.0 0.8 1.4 1 0 0 1 1 1 1 PWI domain DUF1980 PF09323.10 CCF76032.1 - 3.6 7.5 9.0 0.31 10.9 0.2 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1980) YTH PF04146.15 CCF76033.1 - 2.7e-33 115.3 0.1 1.8e-31 109.4 0.1 2.2 1 1 0 1 1 1 1 YT521-B-like domain Diphthamide_syn PF01866.17 CCF76034.1 - 6.3e-106 354.2 0.6 8.3e-106 353.8 0.6 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Rieske PF00355.26 CCF76036.1 - 6.1e-13 48.5 0.1 2.4e-12 46.6 0.0 2.0 2 0 0 2 2 2 1 Rieske [2Fe-2S] domain SUFU_C PF12470.8 CCF76038.1 - 0.13 12.3 0.0 0.19 11.8 0.0 1.2 1 0 0 1 1 1 0 Suppressor of Fused Gli/Ci N terminal binding domain Pkinase PF00069.25 CCF76039.1 - 5.4e-51 173.5 0.1 9.8e-51 172.6 0.1 1.4 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 CCF76039.1 - 1.7e-22 80.0 0.0 3.3e-22 79.0 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 CCF76039.1 - 8.9e-05 21.4 0.0 0.00013 20.8 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase Kinase-like PF14531.6 CCF76039.1 - 9.2e-05 21.9 0.0 0.00028 20.3 0.0 1.8 1 1 1 2 2 2 1 Kinase-like Kdo PF06293.14 CCF76039.1 - 0.00011 21.7 0.3 0.00019 20.9 0.3 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 CCF76039.1 - 0.0043 17.0 0.1 0.0068 16.3 0.1 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family DUF1604 PF07713.13 CCF76040.1 - 3.5e-27 94.1 0.3 7.1e-27 93.1 0.3 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1604) Ribosomal_S8e PF01201.22 CCF76041.1 - 1.3e-45 154.9 1.7 1.8e-45 154.5 1.7 1.2 1 0 0 1 1 1 1 Ribosomal protein S8e DUF1460 PF07313.12 CCF76041.1 - 0.078 12.4 0.4 0.67 9.3 0.3 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1460) Sld5 PF05916.11 CCF76042.1 - 3.2e-09 37.2 0.1 1.7e-08 34.9 0.0 2.2 2 0 0 2 2 2 1 GINS complex protein Pro_isomerase PF00160.21 CCF76044.1 - 2.6e-38 131.8 0.0 5.3e-38 130.8 0.0 1.5 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD U-box PF04564.15 CCF76044.1 - 0.042 14.0 0.2 0.097 12.9 0.2 1.6 1 0 0 1 1 1 0 U-box domain UvrA_DNA-bind PF17755.1 CCF76044.1 - 0.069 13.5 0.5 0.15 12.4 0.5 1.5 1 0 0 1 1 1 0 UvrA DNA-binding domain Neur_chan_memb PF02932.16 CCF76044.1 - 0.076 13.1 1.9 0.13 12.3 1.9 1.4 1 0 0 1 1 1 0 Neurotransmitter-gated ion-channel transmembrane region LRR_4 PF12799.7 CCF76045.1 - 8.2e-10 38.8 31.9 0.00091 19.6 1.0 6.8 2 2 7 9 9 9 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 CCF76045.1 - 9.2e-10 38.2 20.2 1.5e-07 31.1 1.6 5.7 4 2 1 5 5 5 5 Leucine rich repeat CAP_GLY PF01302.25 CCF76045.1 - 1e-05 25.4 0.0 3.2e-05 23.9 0.0 1.9 1 0 0 1 1 1 1 CAP-Gly domain LRR_9 PF14580.6 CCF76045.1 - 3.5e-05 23.4 11.3 0.0023 17.4 5.6 2.9 1 1 1 3 3 3 3 Leucine-rich repeat Ubiquitin_2 PF14560.6 CCF76045.1 - 0.018 15.5 0.1 0.21 12.0 0.0 2.6 3 0 0 3 3 3 0 Ubiquitin-like domain FNIP PF05725.12 CCF76045.1 - 0.022 14.9 0.5 0.53 10.5 0.0 3.5 4 1 0 4 4 4 0 FNIP Repeat LRR_6 PF13516.6 CCF76045.1 - 5.2 7.4 11.2 1.2e+02 3.1 0.1 5.3 5 0 0 5 5 5 0 Leucine Rich repeat PCNA_N PF00705.18 CCF76046.1 - 6.4e-25 87.3 0.2 1.3e-24 86.3 0.2 1.6 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 CCF76046.1 - 5.7e-16 58.8 0.2 1.9e-15 57.1 0.1 1.8 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 CCF76046.1 - 1.4e-06 28.0 0.0 7.5e-06 25.6 0.0 1.9 1 1 0 1 1 1 1 Rad9 Cthe_2159 PF14262.6 CCF76046.1 - 0.047 13.0 0.1 0.1 11.9 0.0 1.6 2 0 0 2 2 2 0 Carbohydrate-binding domain-containing protein Cthe_2159 Rad1 PF02144.16 CCF76046.1 - 0.075 12.1 0.9 0.94 8.5 0.6 2.6 1 1 1 2 2 2 0 Repair protein Rad1/Rec1/Rad17 Thioredoxin PF00085.20 CCF76048.1 - 9e-24 83.4 0.0 1.5e-23 82.7 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 CCF76048.1 - 0.00015 22.1 0.0 0.00098 19.6 0.0 2.1 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 CCF76048.1 - 0.019 14.8 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 CCF76048.1 - 0.021 15.1 0.1 2.4 8.5 0.0 2.4 1 1 1 2 2 2 0 Thioredoxin-like HyaE PF07449.11 CCF76048.1 - 0.036 14.0 0.0 0.062 13.3 0.0 1.3 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Thioredoxin_3 PF13192.6 CCF76048.1 - 0.088 12.9 0.0 0.15 12.1 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin domain MMR_HSR1 PF01926.23 CCF76049.1 - 4.8e-11 42.7 0.1 1.4e-10 41.2 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_15 PF13175.6 CCF76049.1 - 0.014 15.2 9.0 0.11 12.1 0.0 2.5 2 1 0 2 2 2 0 AAA ATPase domain FeoB_N PF02421.18 CCF76049.1 - 0.021 14.4 0.0 0.071 12.6 0.0 1.8 1 1 0 1 1 1 0 Ferrous iron transport protein B RsgA_GTPase PF03193.16 CCF76049.1 - 0.049 13.5 0.0 0.16 11.9 0.0 1.9 1 1 0 1 1 1 0 RsgA GTPase Dynamin_N PF00350.23 CCF76049.1 - 0.081 13.0 0.0 1.2 9.1 0.0 2.6 1 1 0 2 2 2 0 Dynamin family Arf PF00025.21 CCF76049.1 - 0.088 12.2 0.0 4.3 6.8 0.0 2.4 1 1 1 2 2 2 0 ADP-ribosylation factor family cobW PF02492.19 CCF76049.1 - 0.13 11.9 0.1 4.4 6.8 0.1 2.2 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain FNIP PF05725.12 CCF76052.1 - 0.025 14.7 0.5 0.025 14.7 0.5 2.0 2 0 0 2 2 2 0 FNIP Repeat Mito_carr PF00153.27 CCF76053.1 - 1.4e-51 172.3 4.5 7.2e-19 67.5 0.5 3.9 3 1 0 3 3 3 3 Mitochondrial carrier protein Bac_DNA_binding PF00216.21 CCF76055.1 - 2.9e-21 75.5 0.3 3.7e-21 75.1 0.3 1.1 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 CCF76055.1 - 1.8e-08 34.5 0.1 3.3e-08 33.7 0.1 1.5 1 1 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_euk_1 PF14908.6 CCF76055.1 - 1.5e-05 25.1 0.1 2.9e-05 24.1 0.0 1.5 1 1 0 1 1 1 1 CCDC81 eukaryotic HU domain 1 Mon1 PF03164.14 CCF76055.1 - 0.01 14.9 0.2 0.012 14.7 0.2 1.2 1 0 0 1 1 1 0 Trafficking protein Mon1 DUF4634 PF15465.6 CCF76055.1 - 0.044 14.1 0.0 0.053 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4634) HU-CCDC81_bac_2 PF18175.1 CCF76055.1 - 0.071 13.0 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_2 PF18289.1 CCF76055.1 - 0.12 12.5 0.0 0.26 11.5 0.0 1.5 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 Prefoldin_2 PF01920.20 CCF76056.1 - 1.5e-11 44.2 0.6 1.8e-11 43.9 0.6 1.1 1 0 0 1 1 1 1 Prefoldin subunit Fib_alpha PF08702.10 CCF76056.1 - 0.018 15.3 0.8 0.032 14.4 0.8 1.4 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family KxDL PF10241.9 CCF76056.1 - 0.02 15.2 2.7 0.57 10.5 0.3 2.3 1 1 0 2 2 2 0 Uncharacterized conserved protein SKA2 PF16740.5 CCF76056.1 - 0.12 12.2 1.4 4.5 7.1 0.1 2.2 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 2 XhlA PF10779.9 CCF76056.1 - 3.9 7.8 7.0 1.1 9.5 1.4 2.6 2 1 1 3 3 3 0 Haemolysin XhlA SPC22 PF04573.12 CCF76057.1 - 1.3e-27 96.4 0.1 1.6e-27 96.1 0.1 1.0 1 0 0 1 1 1 1 Signal peptidase subunit Sporozoite_P67 PF05642.11 CCF76058.1 - 0.019 13.1 0.7 0.025 12.7 0.7 1.1 1 0 0 1 1 1 0 Sporozoite P67 surface antigen DAP PF15228.6 CCF76058.1 - 1.1 10.5 5.6 0.37 12.0 0.4 2.4 1 1 1 2 2 2 0 Death-associated protein Adaptin_N PF01602.20 CCF76059.1 - 8.7e-46 156.6 22.9 2e-44 152.1 22.9 2.2 1 1 0 1 1 1 1 Adaptin N terminal region HEAT_2 PF13646.6 CCF76059.1 - 0.00027 21.2 0.0 0.33 11.4 0.0 4.1 3 1 1 4 4 4 1 HEAT repeats DUF760 PF05542.11 CCF76059.1 - 2.7 8.4 4.7 62 4.0 3.4 3.4 2 1 0 2 2 2 0 Protein of unknown function (DUF760) RabGAP-TBC PF00566.18 CCF76060.1 - 6.9e-13 48.7 5.1 1e-12 48.2 5.1 1.2 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Collagen PF01391.18 CCF76060.1 - 0.015 15.0 0.0 5 7.0 0.0 3.1 1 1 0 1 1 1 0 Collagen triple helix repeat (20 copies) Ribosomal_L32e PF01655.18 CCF76061.1 - 1.5e-40 137.9 0.8 1.8e-40 137.7 0.8 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 Tubulin PF00091.25 CCF76062.1 - 7e-68 228.7 0.0 1e-67 228.2 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 CCF76062.1 - 2.1e-51 173.3 0.2 3.9e-51 172.5 0.2 1.5 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 CCF76062.1 - 0.0033 17.1 0.0 0.0081 15.9 0.0 1.8 1 0 0 1 1 1 1 Tubulin domain Telomere_Sde2_2 PF13297.6 CCF76064.1 - 0.00069 19.2 0.0 0.0017 18.0 0.0 1.6 1 0 0 1 1 1 1 Telomere stability C-terminal LysM PF01476.20 CCF76064.1 - 0.074 13.1 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 LysM domain Cpn60_TCP1 PF00118.24 CCF76065.1 - 1.3e-162 541.8 10.5 1.5e-162 541.6 10.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family WD40 PF00400.32 CCF76066.1 - 8.7e-15 54.9 13.2 0.0044 17.8 0.1 6.1 6 1 0 6 6 6 4 WD domain, G-beta repeat Nup160 PF11715.8 CCF76066.1 - 0.051 12.2 1.0 3.9 6.0 0.0 2.4 2 1 0 2 2 2 0 Nucleoporin Nup120/160 WD40 PF00400.32 CCF76067.1 - 3.7e-12 46.6 4.1 0.00011 22.8 0.1 4.7 4 0 0 4 4 4 3 WD domain, G-beta repeat DUF4474 PF14751.6 CCF76067.1 - 0.075 12.4 0.1 0.15 11.5 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4474) Ribosomal_L1 PF00687.21 CCF76068.1 - 9.5e-42 143.0 0.9 1.2e-41 142.7 0.9 1.1 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family TetR PF13972.6 CCF76068.1 - 0.16 11.7 0.0 0.32 10.7 0.0 1.4 1 0 0 1 1 1 0 Bacterial transcriptional repressor MDM1 PF15501.6 CCF76069.1 - 0.52 9.4 19.2 0.58 9.3 19.2 1.1 1 0 0 1 1 1 0 Nuclear protein MDM1 Thioredoxin PF00085.20 CCF76070.1 - 7.3e-05 22.7 0.1 0.00016 21.6 0.1 1.5 1 0 0 1 1 1 1 Thioredoxin Phosducin PF02114.16 CCF76070.1 - 0.0093 14.9 0.8 0.014 14.3 0.8 1.2 1 0 0 1 1 1 1 Phosducin DUF3361 PF11841.8 CCF76071.1 - 0.018 15.0 1.5 0.057 13.3 1.5 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF3361) Coat_F PF07875.12 CCF76071.1 - 0.4 10.9 3.4 2.2 8.6 0.0 3.1 4 0 0 4 4 4 0 Coat F domain Arm_3 PF16186.5 CCF76071.1 - 0.59 9.7 3.0 2 8.0 0.2 2.9 2 1 1 3 3 3 0 Atypical Arm repeat PP2C_C PF07830.13 CCF76071.1 - 0.87 10.1 3.1 1.7 9.1 0.3 2.9 3 1 0 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain Fes1 PF08609.10 CCF76071.1 - 3.1 8.7 9.1 3.4 8.6 6.2 2.5 2 2 0 2 2 2 0 Nucleotide exchange factor Fes1 Fib_alpha PF08702.10 CCF76071.1 - 4.8 7.4 7.8 1.2 9.3 4.2 1.9 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family PPR_2 PF13041.6 CCF76072.1 - 2.3e-38 130.1 15.7 1.6e-13 50.6 0.2 9.2 4 1 6 10 10 10 7 PPR repeat family PPR_3 PF13812.6 CCF76072.1 - 1.4e-26 92.4 5.2 4.9e-05 23.3 0.0 6.8 6 1 0 7 7 7 5 Pentatricopeptide repeat domain PPR_1 PF12854.7 CCF76072.1 - 5.5e-23 80.4 9.0 1.4e-05 24.7 0.1 7.6 8 0 0 8 8 8 4 PPR repeat PPR PF01535.20 CCF76072.1 - 1.1e-19 69.2 23.0 2.7e-07 30.4 0.4 9.9 10 1 0 10 10 10 5 PPR repeat PPR_long PF17177.4 CCF76072.1 - 1.1e-13 51.0 0.0 2.3e-05 23.9 0.0 3.8 1 1 1 3 3 3 2 Pentacotripeptide-repeat region of PRORP RPM2 PF08579.11 CCF76072.1 - 0.0026 18.1 5.9 4.6 7.7 0.0 4.3 4 1 1 5 5 5 2 Mitochondrial ribonuclease P subunit (RPM2) MNE1 PF13762.6 CCF76072.1 - 0.017 15.1 0.6 0.077 13.0 0.1 2.5 2 0 0 2 2 2 0 Mitochondrial splicing apparatus component ATP13 PF12921.7 CCF76072.1 - 0.059 13.2 0.4 22 5.0 0.0 3.1 2 1 1 3 3 3 0 Mitochondrial ATPase expression DUF1754 PF08555.10 CCF76073.1 - 0.0014 19.4 0.4 0.0014 19.4 0.4 1.6 2 1 0 2 2 2 1 Eukaryotic family of unknown function (DUF1754) TCTP PF00838.17 CCF76073.1 - 0.0029 18.0 1.1 0.0034 17.7 1.1 1.1 1 0 0 1 1 1 1 Translationally controlled tumour protein DUF4760 PF15956.5 CCF76073.1 - 0.019 15.1 0.0 0.032 14.4 0.0 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4760) Mso1_C PF14477.6 CCF76074.1 - 0.18 12.2 0.4 5.2 7.5 0.0 2.4 2 0 0 2 2 2 0 Membrane-polarising domain of Mso1 GTP_EFTU PF00009.27 CCF76075.1 - 9.7e-58 194.9 0.0 1.7e-57 194.1 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_II PF14492.6 CCF76075.1 - 6.1e-30 103.1 0.0 1.1e-29 102.3 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_IV PF03764.18 CCF76075.1 - 8.2e-28 96.6 0.0 1.6e-27 95.7 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_C PF00679.24 CCF76075.1 - 1.1e-22 79.8 0.1 2.4e-22 78.8 0.1 1.6 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 CCF76075.1 - 2.1e-10 40.8 0.0 1.2e-09 38.5 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 RF3_C PF16658.5 CCF76075.1 - 1.6e-05 24.8 0.0 3.2e-05 23.8 0.0 1.4 1 0 0 1 1 1 1 Class II release factor RF3, C-terminal domain Arm_2 PF04826.13 CCF76076.1 - 0.0017 17.9 2.1 0.0095 15.4 0.5 2.5 2 0 0 2 2 2 1 Armadillo-like FAST_1 PF06743.15 CCF76079.1 - 1.5e-06 28.0 5.4 0.00045 20.1 0.7 3.8 3 0 0 3 3 3 2 FAST kinase-like protein, subdomain 1 Importin_rep_6 PF18829.1 CCF76079.1 - 0.029 14.5 0.2 0.14 12.3 0.2 2.2 1 0 0 1 1 1 0 Importin repeat 6 MACPF PF01823.19 CCF76080.1 - 8.8e-25 88.0 3.2 3.5e-23 82.8 3.2 2.2 1 1 0 1 1 1 1 MAC/Perforin domain Proteasome PF00227.26 CCF76081.1 - 2.7e-60 203.1 0.0 4.4e-60 202.4 0.0 1.3 2 0 0 2 2 2 1 Proteasome subunit Proteasome_A_N PF10584.9 CCF76081.1 - 1.5e-09 37.4 0.6 3e-09 36.4 0.0 1.8 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Sipho_Gp157 PF05565.11 CCF76081.1 - 0.0014 18.7 0.6 0.0025 17.8 0.1 1.7 2 0 0 2 2 2 1 Siphovirus Gp157 PBP5_C PF07943.13 CCF76081.1 - 0.066 13.4 0.1 0.13 12.5 0.1 1.5 1 0 0 1 1 1 0 Penicillin-binding protein 5, C-terminal domain Bac_surface_Ag PF01103.23 CCF76082.1 - 9.8e-16 58.1 2.6 1.3e-15 57.7 2.6 1.1 1 0 0 1 1 1 1 Surface antigen La_HTH_kDCL PF18177.1 CCF76083.1 - 0.069 13.4 0.0 0.086 13.1 0.0 1.2 1 1 0 1 1 1 0 La HTH in kinetoplastid DICER domain CPW_WPC PF09717.10 CCF76084.1 - 8.1e-30 103.6 28.0 4.2e-11 43.7 0.7 4.2 4 0 0 4 4 4 4 Plasmodium falciparum domain of unknown function (CPW_WPC) Peptidase_S24 PF00717.23 CCF76085.1 - 1.2e-11 44.4 0.1 2e-11 43.7 0.1 1.4 1 0 0 1 1 1 1 Peptidase S24-like UbiA PF01040.18 CCF76087.1 - 1.7e-44 152.1 3.9 2.1e-44 151.7 3.9 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family Ntox5 PF15543.6 CCF76087.1 - 0.037 13.9 0.0 0.061 13.2 0.0 1.2 1 0 0 1 1 1 0 Bacterial toxin 5 MACPF PF01823.19 CCF76088.1 - 4e-72 242.7 26.9 1.4e-24 87.4 0.1 4.7 3 2 1 4 4 4 3 MAC/Perforin domain OHA PF14418.6 CCF76089.1 - 1.1e-22 79.6 0.0 4.3e-22 77.7 0.0 2.0 1 0 0 1 1 1 1 OST-HTH Associated domain OST-HTH PF12872.7 CCF76089.1 - 0.00099 18.9 0.0 0.0023 17.7 0.0 1.5 1 0 0 1 1 1 1 OST-HTH/LOTUS domain HECW1_helix PF18436.1 CCF76089.1 - 0.081 13.1 0.0 0.32 11.1 0.0 2.0 2 0 0 2 2 2 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 GTP1_OBG PF01018.22 CCF76090.1 - 4.4e-27 94.6 6.1 6.1e-27 94.1 6.1 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 CCF76090.1 - 4.9e-18 65.3 0.0 7.4e-18 64.7 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 CCF76090.1 - 1.8e-11 43.8 0.0 3e-11 43.1 0.0 1.4 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF76090.1 - 0.13 12.3 0.2 4.6 7.3 0.1 2.1 1 1 1 2 2 2 0 Dynamin family PduV-EutP PF10662.9 CCF76090.1 - 0.14 11.9 0.0 0.24 11.2 0.0 1.2 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_18 PF13238.6 CCF76090.1 - 0.16 12.6 0.0 0.3 11.6 0.0 1.6 1 1 0 1 1 1 0 AAA domain GTP_EFTU PF00009.27 CCF76090.1 - 0.16 11.5 0.0 5.3 6.5 0.0 2.1 1 1 1 2 2 2 0 Elongation factor Tu GTP binding domain dCMP_cyt_deam_1 PF00383.23 CCF76092.1 - 8.7e-20 70.5 5.5 1.1e-19 70.1 5.5 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 CCF76092.1 - 8.6e-19 67.7 0.1 9.6e-19 67.5 0.1 1.1 1 0 0 1 1 1 1 MafB19-like deaminase SNAD4 PF18750.1 CCF76092.1 - 0.00032 20.8 0.7 0.00047 20.3 0.7 1.2 1 0 0 1 1 1 1 Secreted Novel AID/APOBEC-like Deaminase 4 APOBEC2 PF18772.1 CCF76092.1 - 0.0073 16.4 0.9 0.01 15.9 0.9 1.1 1 0 0 1 1 1 1 APOBEC2 NAD1 PF18778.1 CCF76092.1 - 0.0083 16.2 0.9 0.011 15.8 0.9 1.1 1 0 0 1 1 1 1 Novel AID APOBEC clade 1 NAD2 PF18782.1 CCF76092.1 - 0.013 15.6 0.4 0.019 15.1 0.4 1.1 1 0 0 1 1 1 0 Novel AID APOBEC clade 2 APOBEC_N PF08210.11 CCF76092.1 - 0.025 14.5 0.8 0.035 14.0 0.8 1.1 1 0 0 1 1 1 0 APOBEC-like N-terminal domain APOBEC4_like PF18774.1 CCF76092.1 - 0.039 13.9 1.5 0.059 13.3 1.5 1.2 1 0 0 1 1 1 0 APOBEC4-like -AID/APOBEC-deaminase APOBEC3 PF18771.1 CCF76092.1 - 0.24 11.5 1.3 0.33 11.1 1.3 1.2 1 0 0 1 1 1 0 APOBEC3 Bd3614-deam PF14439.6 CCF76092.1 - 0.56 10.3 9.0 3.6 7.7 0.6 2.2 1 1 1 2 2 2 0 Bd3614-like deaminase SPC25 PF06703.11 CCF76093.1 - 0.0012 18.7 2.2 0.0018 18.1 2.2 1.3 1 1 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) Snf7 PF03357.21 CCF76094.1 - 8e-06 25.6 1.6 1.1e-05 25.1 1.6 1.1 1 0 0 1 1 1 1 Snf7 DUF1451 PF07295.11 CCF76094.1 - 0.0041 17.2 0.3 0.0063 16.6 0.3 1.2 1 0 0 1 1 1 1 Zinc-ribbon containing domain Viral_P18 PF04521.13 CCF76094.1 - 0.036 13.8 0.6 0.062 13.1 0.6 1.3 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein DEAD PF00270.29 CCF76095.1 - 8.2e-32 110.4 0.0 1.7e-31 109.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF76095.1 - 1.8e-08 34.7 0.0 5.1e-08 33.2 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain POP1 PF06978.11 CCF76096.1 - 9e-26 91.1 17.0 2.2e-17 63.8 1.0 2.8 2 1 1 3 3 3 2 Ribonucleases P/MRP protein subunit POP1 POPLD PF08170.12 CCF76096.1 - 8.1e-19 67.8 0.0 2.5e-18 66.2 0.0 1.8 1 0 0 1 1 1 1 POPLD (NUC188) domain GCV_T PF01571.21 CCF76096.1 - 0.0002 20.9 0.0 0.51 9.7 0.0 2.4 2 0 0 2 2 2 2 Aminomethyltransferase folate-binding domain IPK PF03770.16 CCF76097.1 - 8.9e-38 130.1 0.8 3.6e-37 128.1 0.1 2.2 2 1 0 2 2 2 1 Inositol polyphosphate kinase eIF-3_zeta PF05091.12 CCF76098.1 - 1.7e-154 515.7 3.7 2e-154 515.4 3.7 1.0 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) NARG2_C PF10505.9 CCF76098.1 - 0.016 14.7 0.0 0.047 13.2 0.0 1.8 1 0 0 1 1 1 0 NMDA receptor-regulated gene protein 2 C-terminus SAE2 PF08573.10 CCF76098.1 - 0.037 15.2 2.2 0.13 13.4 2.2 1.9 1 0 0 1 1 1 0 DNA repair protein endonuclease SAE2/CtIP C-terminus Patatin PF01734.22 CCF76099.1 - 5.6e-19 69.1 0.0 1.7e-17 64.3 0.0 2.6 2 0 0 2 2 2 1 Patatin-like phospholipase zf-HC5HC2H_2 PF13832.6 CCF76101.1 - 1.1e-08 35.2 18.0 6.8e-07 29.4 6.0 5.6 4 2 1 5 5 5 2 PHD-zinc-finger like domain PHD PF00628.29 CCF76101.1 - 3e-08 33.4 19.6 4.2e-06 26.6 9.8 7.2 7 1 0 7 7 7 2 PHD-finger zf-HC5HC2H PF13771.6 CCF76101.1 - 2.3e-06 27.8 13.2 0.00017 21.8 6.1 6.2 5 1 1 6 6 6 2 PHD-like zinc-binding domain Rhomboid PF01694.22 CCF76102.1 - 1.5e-22 80.2 7.8 1.7e-21 76.8 7.8 2.3 1 1 0 1 1 1 1 Rhomboid family DUF3819 PF12842.7 CCF76102.1 - 0.22 11.5 0.0 0.36 10.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3819) Cytochrom_B562 PF07361.11 CCF76103.1 - 0.0087 16.7 0.2 0.35 11.5 0.0 2.7 3 0 0 3 3 3 1 Cytochrome b562 Ribosomal_L15e PF00827.17 CCF76104.1 - 2.5e-91 304.6 6.5 2.8e-91 304.4 6.5 1.0 1 0 0 1 1 1 1 Ribosomal L15 Hepatitis_core PF00906.20 CCF76104.1 - 1.4 8.5 7.0 1.4 8.5 0.1 2.1 2 0 0 2 2 2 0 Hepatitis core antigen AP2 PF00847.20 CCF76105.1 - 2.9e-07 30.6 3.7 1.4e-06 28.4 3.7 2.1 1 1 0 1 1 1 1 AP2 domain Clat_adaptor_s PF01217.20 CCF76105.1 - 7.6e-05 22.7 1.9 0.00032 20.6 1.9 1.9 1 1 0 1 1 1 1 Clathrin adaptor complex small chain Mqo PF06039.15 CCF76106.1 - 3.2e-14 52.3 0.0 6.2e-14 51.4 0.0 1.4 1 1 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) SNARE PF05739.19 CCF76107.1 - 0.029 14.3 0.1 0.082 12.9 0.1 1.8 1 0 0 1 1 1 0 SNARE domain NUDIX PF00293.28 CCF76111.1 - 2.8e-11 43.6 0.0 3.6e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain DUF4539 PF15072.6 CCF76112.1 - 1.7e-07 31.2 0.5 3.1e-07 30.3 0.5 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4539) Zip PF02535.22 CCF76113.1 - 2.5e-37 128.8 21.6 1.3e-36 126.6 21.6 1.8 1 1 0 1 1 1 1 ZIP Zinc transporter MASE2 PF05230.11 CCF76113.1 - 0.009 16.1 1.6 0.078 13.1 0.0 2.9 2 1 0 2 2 2 1 MASE2 domain SID PF11778.8 CCF76114.1 - 0.0077 16.4 2.9 0.0077 16.4 2.9 1.8 2 0 0 2 2 2 1 Septation initiation Spt5-NGN PF03439.13 CCF76115.1 - 2.6e-18 65.7 0.0 6e-18 64.5 0.0 1.7 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 CCF76115.1 - 1.3e-14 53.6 22.7 4.5e-05 23.2 0.2 7.9 8 0 0 8 8 8 5 KOW motif Spt5_N PF11942.8 CCF76115.1 - 7.1 7.7 23.3 0.084 13.9 13.5 2.3 2 0 0 2 2 2 0 Spt5 transcription elongation factor, acidic N-terminal MMR_HSR1 PF01926.23 CCF76116.1 - 7.7e-14 51.7 0.0 1.9e-05 24.7 0.1 3.0 3 0 0 3 3 3 2 50S ribosome-binding GTPase NOG1 PF06858.14 CCF76116.1 - 9.2e-05 22.1 0.0 0.00027 20.6 0.0 1.8 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) GTP_EFTU PF00009.27 CCF76116.1 - 0.0019 17.8 0.0 0.0054 16.3 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 CCF76116.1 - 0.0031 17.1 0.5 0.03 13.8 0.1 2.5 3 0 0 3 3 3 1 Ferrous iron transport protein B Dynamin_N PF00350.23 CCF76116.1 - 0.0094 16.0 0.7 0.18 11.9 0.0 2.9 3 1 0 3 3 3 1 Dynamin family RsgA_GTPase PF03193.16 CCF76116.1 - 0.023 14.6 0.0 0.064 13.2 0.0 1.8 1 0 0 1 1 1 0 RsgA GTPase AAA_14 PF13173.6 CCF76116.1 - 0.038 14.0 8.2 2 8.4 0.0 3.5 4 0 0 4 4 4 0 AAA domain HSBP1 PF06825.12 CCF76116.1 - 0.08 12.8 0.1 0.08 12.8 0.1 2.0 2 0 0 2 2 2 0 Heat shock factor binding protein 1 Baculo_p74 PF04583.12 CCF76116.1 - 0.086 12.3 0.7 0.15 11.5 0.7 1.4 1 0 0 1 1 1 0 Baculoviridae p74 conserved region Microtub_bd PF16796.5 CCF76116.1 - 0.39 10.7 3.2 45 4.0 0.1 3.2 3 0 0 3 3 3 0 Microtubule binding NPV_P10 PF05531.12 CCF76116.1 - 0.44 11.0 2.5 31 5.1 0.8 2.8 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein IFN-gamma PF00714.17 CCF76116.1 - 0.47 10.3 5.9 0.32 10.9 1.3 2.5 2 0 0 2 2 2 0 Interferon gamma DUF2408 PF10303.9 CCF76116.1 - 0.48 11.0 3.7 0.91 10.1 0.1 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2408) Porin_3 PF01459.22 CCF76118.1 - 9.5e-25 87.6 0.2 1.2e-23 83.9 0.2 2.0 2 0 0 2 2 2 2 Eukaryotic porin M16C_assoc PF08367.11 CCF76120.1 - 1.7e-19 70.0 2.0 4.5e-19 68.6 2.0 1.7 1 1 0 1 1 1 1 Peptidase M16C associated Peptidase_M16_C PF05193.21 CCF76120.1 - 1.2e-17 64.5 0.0 2.2e-08 34.3 0.0 3.7 4 0 0 4 4 4 2 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 CCF76120.1 - 3.1e-05 24.0 0.0 0.00021 21.3 0.0 2.4 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) CdiI_2 PF18593.1 CCF76120.1 - 0.00048 20.7 0.4 0.0087 16.7 0.6 2.6 2 0 0 2 2 2 1 CdiI immunity protein BAR_3 PF16746.5 CCF76120.1 - 0.027 14.2 0.7 0.067 12.9 0.7 1.6 1 0 0 1 1 1 0 BAR domain of APPL family Abhydrolase_6 PF12697.7 CCF76121.1 - 4.1e-19 70.1 0.0 5.6e-19 69.6 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_1 PF00561.20 CCF76121.1 - 6.4e-09 35.8 0.1 1.2e-08 34.9 0.1 1.4 1 0 0 1 1 1 1 alpha/beta hydrolase fold Thioesterase PF00975.20 CCF76121.1 - 4.5e-07 30.2 0.1 1e-06 29.0 0.0 1.5 2 0 0 2 2 2 1 Thioesterase domain Hydrolase_4 PF12146.8 CCF76121.1 - 3.6e-05 23.2 0.1 7.1e-05 22.2 0.1 1.4 1 0 0 1 1 1 1 Serine aminopeptidase, S33 DLH PF01738.18 CCF76121.1 - 0.0039 16.8 0.0 0.014 15.0 0.0 1.7 2 0 0 2 2 2 1 Dienelactone hydrolase family Lipase_3 PF01764.25 CCF76121.1 - 0.0042 17.0 0.1 0.0082 16.0 0.1 1.5 1 0 0 1 1 1 1 Lipase (class 3) BAAT_C PF08840.11 CCF76121.1 - 0.0064 16.4 0.0 0.011 15.7 0.0 1.3 1 0 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal DUF3530 PF12048.8 CCF76121.1 - 0.0067 15.9 0.0 0.0093 15.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3530) LIDHydrolase PF10230.9 CCF76121.1 - 0.028 14.0 0.1 0.051 13.1 0.1 1.4 1 0 0 1 1 1 0 Lipid-droplet associated hydrolase APOC4 PF15119.6 CCF76121.1 - 0.04 14.2 0.1 0.081 13.2 0.1 1.5 1 0 0 1 1 1 0 Apolipoprotein C4 Ser_hydrolase PF06821.13 CCF76121.1 - 0.15 11.9 0.0 0.29 11.0 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase zf-MIZ PF02891.20 CCF76122.1 - 8.9e-19 67.0 2.2 8.9e-19 67.0 2.2 2.7 2 1 1 3 3 3 1 MIZ/SP-RING zinc finger PINIT PF14324.6 CCF76122.1 - 7.5e-05 23.1 0.1 0.00022 21.6 0.0 1.8 2 0 0 2 2 2 1 PINIT domain PHD PF00628.29 CCF76122.1 - 0.00049 19.9 16.9 0.001 18.9 8.8 2.7 2 0 0 2 2 2 2 PHD-finger zf-Nse PF11789.8 CCF76122.1 - 0.025 14.4 0.7 0.025 14.4 0.7 1.9 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit DUF1533 PF07550.11 CCF76122.1 - 0.055 13.4 0.0 0.15 12.0 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1533) zinc_ribbon_10 PF10058.9 CCF76122.1 - 0.58 9.9 15.5 1.9 8.3 0.8 2.6 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein PHD_4 PF16866.5 CCF76122.1 - 1.5 9.0 13.5 5.5 7.2 5.4 2.9 2 1 1 3 3 3 0 PHD-finger EMC3_TMCO1 PF01956.16 CCF76124.1 - 7e-05 22.6 0.1 9.3e-05 22.2 0.1 1.2 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like RRM_1 PF00076.22 CCF76125.1 - 2.5e-17 62.5 0.0 4.4e-17 61.7 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) IGPS PF00218.21 CCF76127.1 - 3.3e-22 78.9 0.0 5.1e-22 78.3 0.0 1.2 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 CCF76127.1 - 0.03 13.8 0.0 0.095 12.1 0.0 1.8 1 0 0 1 1 1 0 Histidine biosynthesis protein Trns_repr_metal PF02583.17 CCF76127.1 - 0.04 14.3 0.3 0.68 10.3 0.0 2.5 2 0 0 2 2 2 0 Metal-sensitive transcriptional repressor WD40 PF00400.32 CCF76128.1 - 2.4e-16 59.8 11.2 8.8e-05 23.2 0.1 8.1 8 0 0 8 8 8 3 WD domain, G-beta repeat PFU PF09070.11 CCF76128.1 - 7.8e-15 55.1 0.2 1.6e-14 54.1 0.2 1.5 1 0 0 1 1 1 1 PFU (PLAA family ubiquitin binding) PUL PF08324.11 CCF76128.1 - 3.6e-11 42.8 3.6 3.6e-11 42.8 3.6 1.5 1 1 0 1 1 1 1 PUL domain WD40_like PF17005.5 CCF76128.1 - 4.1e-05 23.1 0.9 9.9e-05 21.8 0.7 1.7 1 1 1 2 2 2 1 WD40-like domain PH_4 PF15404.6 CCF76128.1 - 0.057 13.2 0.1 0.095 12.5 0.1 1.3 1 0 0 1 1 1 0 Pleckstrin homology domain PQQ_3 PF13570.6 CCF76128.1 - 0.23 12.0 3.7 2.8 8.5 0.1 4.1 4 1 1 5 5 5 0 PQQ-like domain Ribosomal_L9_N PF01281.19 CCF76129.1 - 0.013 15.1 0.0 0.04 13.5 0.0 1.8 2 0 0 2 2 2 0 Ribosomal protein L9, N-terminal domain HTH_5 PF01022.20 CCF76130.1 - 0.061 13.2 0.0 1.7 8.6 0.0 2.4 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 CCF76130.1 - 0.12 12.6 0.1 5.5 7.3 0.0 2.4 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain PNK3P PF08645.11 CCF76131.1 - 9.7e-38 129.4 0.3 1.4e-37 128.9 0.3 1.2 1 0 0 1 1 1 1 Polynucleotide kinase 3 phosphatase AI-2E_transport PF01594.16 CCF76132.1 - 0.042 13.0 3.0 0.3 10.2 0.0 2.9 3 0 0 3 3 3 0 AI-2E family transporter TPR_14 PF13428.6 CCF76133.1 - 1.2e-05 25.7 4.4 10 7.3 0.0 7.6 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_15 PF13429.6 CCF76133.1 - 0.0018 17.6 0.9 0.1 11.8 0.2 2.9 3 0 0 3 3 3 1 Tetratricopeptide repeat PPR PF01535.20 CCF76133.1 - 0.002 18.2 0.0 4.3 7.8 0.0 3.9 4 0 0 4 4 4 1 PPR repeat TPR_8 PF13181.6 CCF76133.1 - 0.0022 18.1 2.1 2.6 8.5 0.0 5.1 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 CCF76133.1 - 0.0023 18.2 0.1 0.98 9.8 0.0 4.1 3 0 0 3 3 3 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 CCF76133.1 - 0.0054 16.7 7.4 5.5 7.0 0.0 5.7 6 0 0 6 6 6 1 Mad3/BUB1 homology region 1 TPR_2 PF07719.17 CCF76133.1 - 0.029 14.5 7.0 0.66 10.2 0.0 5.9 7 0 0 7 7 7 0 Tetratricopeptide repeat HAT PF02184.16 CCF76133.1 - 0.61 10.1 4.5 37 4.4 0.1 4.7 4 0 0 4 4 4 0 HAT (Half-A-TPR) repeat TPR_10 PF13374.6 CCF76133.1 - 0.88 9.5 3.8 4.7 7.2 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_6 PF13174.6 CCF76133.1 - 0.95 10.2 3.8 1.7e+02 3.2 0.0 5.4 5 0 0 5 5 5 0 Tetratricopeptide repeat V-SNARE_C PF12352.8 CCF76135.1 - 9e-06 25.9 0.3 3.7e-05 23.9 0.0 2.0 2 0 0 2 2 2 1 Snare region anchored in the vesicle membrane C-terminus B56 PF01603.20 CCF76136.1 - 9.8e-146 485.9 6.8 1.4e-145 485.5 6.8 1.1 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) Cytochrom_B561 PF03188.16 CCF76136.1 - 0.057 13.6 0.0 0.1 12.8 0.0 1.3 1 0 0 1 1 1 0 Eukaryotic cytochrome b561 Laminin_II PF06009.12 CCF76136.1 - 0.12 12.4 0.3 0.33 11.0 0.3 1.7 1 0 0 1 1 1 0 Laminin Domain II IMP2_N PF18590.1 CCF76137.1 - 1.1e-22 80.4 0.1 1.5e-22 79.9 0.1 1.2 1 0 0 1 1 1 1 Immune Mapped Protein 2 (IMP2) N-terminal domain IMP2_C PF18591.1 CCF76137.1 - 8.4e-15 54.4 0.1 1.3e-14 53.7 0.1 1.3 1 0 0 1 1 1 1 Immune Mapped Protein 2 (IMP2) C-terminal domain MTBP_mid PF14919.6 CCF76138.1 - 0.081 12.1 0.1 0.091 12.0 0.1 1.1 1 0 0 1 1 1 0 MDM2-binding DUF3611 PF12263.8 CCF76140.1 - 0.73 9.7 7.6 0.08 12.8 2.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3611) DUF2678 PF10856.8 CCF76140.1 - 0.8 9.7 5.5 1.6 8.7 5.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2678) DUF900 PF05990.12 CCF76141.1 - 3e-17 62.9 0.0 3.1e-15 56.3 0.0 2.2 2 0 0 2 2 2 2 Alpha/beta hydrolase of unknown function (DUF900) CoA_binding_3 PF13727.6 CCF76141.1 - 1 9.3 3.0 2.1 8.4 3.0 1.4 1 0 0 1 1 1 0 CoA-binding domain zf-CDGSH PF09360.10 CCF76142.1 - 9.1e-09 35.4 0.0 1.7e-08 34.5 0.0 1.5 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type HECT PF00632.25 CCF76143.1 - 1.3e-48 166.1 0.0 1.1e-47 163.0 0.0 2.4 1 1 0 1 1 1 1 HECT-domain (ubiquitin-transferase) YARHG PF13308.6 CCF76143.1 - 0.052 13.4 0.1 0.15 11.9 0.1 1.8 1 0 0 1 1 1 0 YARHG domain Methyltr_RsmB-F PF01189.17 CCF76145.1 - 2.2e-33 115.6 0.0 1.9e-32 112.6 0.0 2.0 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Baculo_LEF5 PF04838.12 CCF76145.1 - 0.0083 16.2 0.1 0.019 15.0 0.1 1.5 1 0 0 1 1 1 1 Baculoviridae late expression factor 5 Methyltr_RsmF_N PF17125.5 CCF76145.1 - 0.15 12.6 0.0 0.4 11.2 0.0 1.7 1 0 0 1 1 1 0 N-terminal domain of 16S rRNA methyltransferase RsmF Mvb12 PF09452.10 CCF76145.1 - 0.15 12.5 0.7 0.64 10.5 0.0 2.2 2 0 0 2 2 2 0 ESCRT-I subunit Mvb12 RNA_pol_A_CTD PF03118.15 CCF76146.1 - 0.07 12.9 0.0 0.23 11.3 0.0 1.8 2 0 0 2 2 2 0 Bacterial RNA polymerase, alpha chain C terminal domain Ribosomal_L39 PF00832.20 CCF76149.1 - 7.5e-22 76.7 9.9 7.5e-22 76.7 9.9 1.3 2 0 0 2 2 2 1 Ribosomal L39 protein PADR1 PF08063.12 CCF76150.1 - 1.3 8.8 4.9 0.25 11.2 0.9 1.8 2 0 0 2 2 2 0 PADR1 (NUC008) domain Peptidase_C1 PF00112.23 CCF76151.1 - 4e-59 200.3 0.1 6.9e-59 199.6 0.1 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 CCF76151.1 - 6.9e-13 48.8 3.3 1.3e-12 47.9 3.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 CCF76151.1 - 4.9e-07 28.9 1.8 4.8e-05 22.3 0.1 2.4 2 1 0 2 2 2 2 Peptidase C1-like family PQQ PF01011.21 CCF76151.1 - 0.063 13.2 1.2 1.1 9.3 1.3 2.4 2 0 0 2 2 2 0 PQQ enzyme repeat Synaptobrevin PF00957.21 CCF76151.1 - 0.1 12.4 0.2 0.18 11.6 0.2 1.3 1 0 0 1 1 1 0 Synaptobrevin DEAD PF00270.29 CCF76152.1 - 1.8e-35 122.3 0.5 3.5e-35 121.3 0.5 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 CCF76152.1 - 7e-26 90.7 0.6 6.3e-25 87.7 0.0 2.6 2 1 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 CCF76152.1 - 4.1e-07 30.1 0.1 9.1e-07 29.0 0.1 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 CCF76152.1 - 3.1e-06 26.2 0.1 5.3e-06 25.4 0.1 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain AAA_22 PF13401.6 CCF76152.1 - 0.00025 21.3 0.2 0.002 18.4 0.2 2.4 1 1 0 1 1 1 1 AAA domain SWI2_SNF2 PF18766.1 CCF76152.1 - 0.026 14.2 0.1 0.063 12.9 0.1 1.6 1 1 0 1 1 1 0 SWI2/SNF2 ATPase Helicase_C_2 PF13307.6 CCF76152.1 - 0.1 12.8 0.1 0.47 10.6 0.0 2.1 2 1 1 3 3 3 0 Helicase C-terminal domain An_peroxidase PF03098.15 CCF76152.1 - 0.1 11.1 0.0 1.2 7.6 0.0 2.0 2 0 0 2 2 2 0 Animal haem peroxidase DUF747 PF05346.11 CCF76153.1 - 1.1e-97 327.3 26.7 1.6e-97 326.8 26.7 1.1 1 0 0 1 1 1 1 Eukaryotic membrane protein family Peptidase_C1 PF00112.23 CCF76154.1 - 4e-59 200.3 0.1 6.9e-59 199.6 0.1 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 CCF76154.1 - 6.9e-13 48.8 3.3 1.3e-12 47.9 3.3 1.5 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 CCF76154.1 - 4.9e-07 28.9 1.8 4.8e-05 22.3 0.1 2.4 2 1 0 2 2 2 2 Peptidase C1-like family PQQ PF01011.21 CCF76154.1 - 0.063 13.2 1.2 1.1 9.3 1.3 2.4 2 0 0 2 2 2 0 PQQ enzyme repeat Synaptobrevin PF00957.21 CCF76154.1 - 0.1 12.4 0.2 0.18 11.6 0.2 1.3 1 0 0 1 1 1 0 Synaptobrevin Exo_endo_phos PF03372.23 CCF76155.1 - 9.7e-13 48.2 0.0 3.7e-12 46.3 0.0 1.9 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family UQ_con PF00179.26 CCF76156.1 - 4.1e-44 149.6 0.1 4.7e-44 149.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 CCF76156.1 - 0.0017 18.6 0.3 0.0028 17.9 0.3 1.4 1 1 0 1 1 1 1 RWD domain UEV PF05743.13 CCF76156.1 - 0.11 12.4 0.1 0.18 11.7 0.1 1.4 1 0 0 1 1 1 0 UEV domain Cpn60_TCP1 PF00118.24 CCF76157.1 - 4.9e-148 493.8 7.2 5.6e-148 493.6 7.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family FN3_7 PF18447.1 CCF76157.1 - 0.18 12.1 2.8 0.22 11.9 0.9 2.1 2 0 0 2 2 2 0 Fibronectin type III domain DUF1497 PF07384.11 CCF76158.1 - 0.11 12.9 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1497) Longin PF13774.6 CCF76159.1 - 2.8e-17 62.5 0.1 4.9e-17 61.7 0.1 1.4 1 0 0 1 1 1 1 Regulated-SNARE-like domain Synaptobrevin PF00957.21 CCF76159.1 - 2.4e-11 43.3 0.8 4e-11 42.6 0.8 1.4 1 0 0 1 1 1 1 Synaptobrevin DUF747 PF05346.11 CCF76160.1 - 2.3e-64 217.9 12.0 3.4e-64 217.3 12.0 1.1 1 0 0 1 1 1 1 Eukaryotic membrane protein family Cloacin_immun PF03513.14 CCF76160.1 - 0.07 13.5 0.1 0.21 12.0 0.1 1.8 1 0 0 1 1 1 0 Cloacin immunity protein BMP2K_C PF15282.6 CCF76160.1 - 0.34 10.7 2.2 1.8 8.4 0.1 2.6 2 1 1 3 3 3 0 BMP-2-inducible protein kinase C-terminus ArsR PF09824.9 CCF76161.1 - 0.044 13.4 2.6 0.071 12.7 0.4 2.2 2 1 1 3 3 3 0 ArsR transcriptional regulator Baculo_RING PF05883.11 CCF76161.1 - 0.19 11.7 4.9 0.14 12.1 1.9 2.2 2 1 1 3 3 3 0 Baculovirus U-box/Ring-like domain D123 PF07065.14 CCF76161.1 - 0.29 10.3 2.7 0.13 11.4 0.2 1.6 2 0 0 2 2 2 0 D123 YtxH PF12732.7 CCF76161.1 - 0.36 11.4 1.1 1.3 9.6 0.0 2.4 2 1 1 3 3 3 0 YtxH-like protein DUF3161 PF11362.8 CCF76162.1 - 0.072 13.1 2.3 1.7 8.7 0.1 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3161) # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_microti-strainRI-ASM69194v1/GCA_000691945.1_ASM69194v1_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_microti-strainRI-ASM69194v1/GCA_000691945.1_ASM69194v1_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_microti-strainRI-ASM69194v1/GCA_000691945.1_ASM69194v1_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_microti-strainRI-ASM69194v1/GCA_000691945.1_ASM69194v1_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 00:26:18 2019 # [ok]