Green-APETALA2a	Green-APETALA2a.end1.fastq.gz	Green-APETALA2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-ARF4	Green-ARF4.end1.fastq.gz	Green-ARF4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-BES1_BZR1hp2	Green-BES1_BZR1hp2.end1.fastq.gz	Green-BES1_BZR1hp2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-BHLH1	Green-BHLH1.end1.fastq.gz	Green-BHLH1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-CBF2	Green-CBF2.end1.fastq.gz	Green-CBF2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-CIP2a	Green-CIP2a.end1.fastq.gz	Green-CIP2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-cip2b	Green-cip2b.end1.fastq.gz	Green-cip2b.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-CNR	Green-CNR.end1.fastq.gz	Green-CNR.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-CZFP1	Green-CZFP1.end1.fastq.gz	Green-CZFP1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Dof4	Green-Dof4.end1.fastq.gz	Green-Dof4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-DREB3	Green-DREB3.end1.fastq.gz	Green-DREB3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-EIL1	Green-EIL1.end1.fastq.gz	Green-EIL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-EIL2	Green-EIL2.end1.fastq.gz	Green-EIL2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-EIL3	Green-EIL3.end1.fastq.gz	Green-EIL3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-EIL4	Green-EIL4.end1.fastq.gz	Green-EIL4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-ERF10	Green-ERF10.end1.fastq.gz	Green-ERF10.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-ERF9	Green-ERF9.end1.fastq.gz	Green-ERF9.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-GRAS10	Green-GRAS10.end1.fastq.gz	Green-GRAS10.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-GRAS12	Green-GRAS12.end1.fastq.gz	Green-GRAS12.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-GRAS4	Green-GRAS4.end1.fastq.gz	Green-GRAS4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-gras6	Green-gras6.end1.fastq.gz	Green-gras6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-HALO	Green-HALO.end1.fastq.gz	Green-HALO.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-JERF1	Green-JERF1.end1.fastq.gz	Green-JERF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LAT61	Green-LAT61.end1.fastq.gz	Green-LAT61.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LES1	Green-LES1.end1.fastq.gz	Green-LES1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LeT12	Green-LeT12.end1.fastq.gz	Green-LeT12.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LeZIP2	Green-LeZIP2.end1.fastq.gz	Green-LeZIP2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LOB1	Green-LOB1.end1.fastq.gz	Green-LOB1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LOB38	Green-LOB38.end1.fastq.gz	Green-LOB38.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LOB42	Green-LOB42.end1.fastq.gz	Green-LOB42.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-LSD1	Green-LSD1.end1.fastq.gz	Green-LSD1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-MADS-MC	Green-MADS-MC.end1.fastq.gz	Green-MADS-MC.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-MADS-RIN	Green-MADS-RIN.end1.fastq.gz	Green-MADS-RIN.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-MADS1	Green-MADS1.end1.fastq.gz	Green-MADS1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-MBD5	Green-MBD5.end1.fastq.gz	Green-MBD5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-MBP7	Green-MBP7.end1.fastq.gz	Green-MBP7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-NAC-NOR	Green-NAC-NOR.end1.fastq.gz	Green-NAC-NOR.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-NAC6	Green-NAC6.end1.fastq.gz	Green-NAC6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-NF-YB-3	Green-NF-YB-3.end1.fastq.gz	Green-NF-YB-3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-PTI4	Green-PTI4.end1.fastq.gz	Green-PTI4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SCL32-like	Green-SCL32-like.end1.fastq.gz	Green-SCL32-like.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SEPALLATA3	Green-SEPALLATA3.end1.fastq.gz	Green-SEPALLATA3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_C_4	Green-Sl-ERF_C_4.end1.fastq.gz	Green-Sl-ERF_C_4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_C_6	Green-Sl-ERF_C_6.end1.fastq.gz	Green-Sl-ERF_C_6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_E_4	Green-Sl-ERF_E_4.end1.fastq.gz	Green-Sl-ERF_E_4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_F_2	Green-Sl-ERF_F_2.end1.fastq.gz	Green-Sl-ERF_F_2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_F_3	Green-Sl-ERF_F_3.end1.fastq.gz	Green-Sl-ERF_F_3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_F_4	Green-Sl-ERF_F_4.end1.fastq.gz	Green-Sl-ERF_F_4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-Sl-ERF_F_5	Green-Sl-ERF_F_5.end1.fastq.gz	Green-Sl-ERF_F_5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlBEL1	Green-SlBEL1.end1.fastq.gz	Green-SlBEL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlbHLH014	Green-SlbHLH014.end1.fastq.gz	Green-SlbHLH014.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlbHLH138	Green-SlbHLH138.end1.fastq.gz	Green-SlbHLH138.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlbHLH147	Green-SlbHLH147.end1.fastq.gz	Green-SlbHLH147.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlC3H11	Green-SlC3H11.end1.fastq.gz	Green-SlC3H11.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlC3H48	Green-SlC3H48.end1.fastq.gz	Green-SlC3H48.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlCOL1	Green-SlCOL1.end1.fastq.gz	Green-SlCOL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlDof14	Green-SlDof14.end1.fastq.gz	Green-SlDof14.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlDRP1	Green-SlDRP1.end1.fastq.gz	Green-SlDRP1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF1	Green-SlERF1.end1.fastq.gz	Green-SlERF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF1a-1	Green-SlERF1a-1.end1.fastq.gz	Green-SlERF1a-1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF1a-2	Green-SlERF1a-2.end1.fastq.gz	Green-SlERF1a-2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF36	Green-SlERF36.end1.fastq.gz	Green-SlERF36.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF4-1	Green-SlERF4-1.end1.fastq.gz	Green-SlERF4-1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF4-2	Green-SlERF4-2.end1.fastq.gz	Green-SlERF4-2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF5-2	Green-SlERF5-2.end1.fastq.gz	Green-SlERF5-2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlERF5	Green-SlERF5.end1.fastq.gz	Green-SlERF5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlGABL2	Green-SlGABL2.end1.fastq.gz	Green-SlGABL2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlGABL4	Green-SlGABL4.end1.fastq.gz	Green-SlGABL4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlGATA9_1	Green-SlGATA9_1.end1.fastq.gz	Green-SlGATA9_1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlGATA9_2	Green-SlGATA9_2.end1.fastq.gz	Green-SlGATA9_2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlGRAS3	Green-SlGRAS3.end1.fastq.gz	Green-SlGRAS3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlGT2	Green-SlGT2.end1.fastq.gz	Green-SlGT2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlHB1	Green-SlHB1.end1.fastq.gz	Green-SlHB1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlHZIP2	Green-SlHZIP2.end1.fastq.gz	Green-SlHZIP2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlHZIP3	Green-SlHZIP3.end1.fastq.gz	Green-SlHZIP3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMADF1	Green-SlMADF1.end1.fastq.gz	Green-SlMADF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYB44	Green-SlMYB44.end1.fastq.gz	Green-SlMYB44.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYB70	Green-SlMYB70.end1.fastq.gz	Green-SlMYB70.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYB91	Green-SlMYB91.end1.fastq.gz	Green-SlMYB91.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYBL1	Green-SlMYBL1.end1.fastq.gz	Green-SlMYBL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYBL2	Green-SlMYBL2.end1.fastq.gz	Green-SlMYBL2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYBL3	Green-SlMYBL3.end1.fastq.gz	Green-SlMYBL3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlMYBL4	Green-SlMYBL4.end1.fastq.gz	Green-SlMYBL4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlNAM1	Green-SlNAM1.end1.fastq.gz	Green-SlNAM1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlNAM2	Green-SlNAM2.end1.fastq.gz	Green-SlNAM2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlNAM3	Green-SlNAM3.end1.fastq.gz	Green-SlNAM3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlNAM4	Green-SlNAM4.end1.fastq.gz	Green-SlNAM4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlNAM5	Green-SlNAM5.end1.fastq.gz	Green-SlNAM5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlTCP12	Green-SlTCP12.end1.fastq.gz	Green-SlTCP12.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlTCP15	Green-SlTCP15.end1.fastq.gz	Green-SlTCP15.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlTCP18	Green-SlTCP18.end1.fastq.gz	Green-SlTCP18.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWOX14	Green-SlWOX14.end1.fastq.gz	Green-SlWOX14.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY11	Green-SlWRKY11.end1.fastq.gz	Green-SlWRKY11.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY23	Green-SlWRKY23.end1.fastq.gz	Green-SlWRKY23.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY40	Green-SlWRKY40.end1.fastq.gz	Green-SlWRKY40.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY41	Green-SlWRKY41.end1.fastq.gz	Green-SlWRKY41.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY6	Green-SlWRKY6.end1.fastq.gz	Green-SlWRKY6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY7	Green-SlWRKY7.end1.fastq.gz	Green-SlWRKY7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlWRKY81	Green-SlWRKY81.end1.fastq.gz	Green-SlWRKY81.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlYABBY2a	Green-SlYABBY2a.end1.fastq.gz	Green-SlYABBY2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZF1	Green-SlZF1.end1.fastq.gz	Green-SlZF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZF2	Green-SlZF2.end1.fastq.gz	Green-SlZF2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZF3	Green-SlZF3.end1.fastq.gz	Green-SlZF3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZF6	Green-SlZF6.end1.fastq.gz	Green-SlZF6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZFCL3	Green-SlZFCL3.end1.fastq.gz	Green-SlZFCL3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZIP1	Green-SlZIP1.end1.fastq.gz	Green-SlZIP1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZIP3	Green-SlZIP3.end1.fastq.gz	Green-SlZIP3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZIP4	Green-SlZIP4.end1.fastq.gz	Green-SlZIP4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZIP5	Green-SlZIP5.end1.fastq.gz	Green-SlZIP5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZIP6	Green-SlZIP6.end1.fastq.gz	Green-SlZIP6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SlZIP7	Green-SlZIP7.end1.fastq.gz	Green-SlZIP7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfA2	Green-SolycHsfA2.end1.fastq.gz	Green-SolycHsfA2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfA4a	Green-SolycHsfA4a.end1.fastq.gz	Green-SolycHsfA4a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfA6b	Green-SolycHsfA6b.end1.fastq.gz	Green-SolycHsfA6b.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfA7	Green-SolycHsfA7.end1.fastq.gz	Green-SolycHsfA7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfB1	Green-SolycHsfB1.end1.fastq.gz	Green-SolycHsfB1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfB2a	Green-SolycHsfB2a.end1.fastq.gz	Green-SolycHsfB2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfB2b	Green-SolycHsfB2b.end1.fastq.gz	Green-SolycHsfB2b.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-SolycHsfC1	Green-SolycHsfC1.end1.fastq.gz	Green-SolycHsfC1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-TDR4	Green-TDR4.end1.fastq.gz	Green-TDR4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-TM29	Green-TM29.end1.fastq.gz	Green-TM29.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Green-VAHOX1	Green-VAHOX1.end1.fastq.gz	Green-VAHOX1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-ampDAP_100_A.end2.fastq.gz	HALO-Green-ampDAP_100_A.end1.fastq.gz	HALO-Green-ampDAP_100_A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-ampDAP_150_A.end2.fastq.gz	HALO-Green-ampDAP_150_A.end1.fastq.gz	HALO-Green-ampDAP_150_A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-ampDAP_300_A.end2.fastq.gz	HALO-Green-ampDAP_300_A.end1.fastq.gz	HALO-Green-ampDAP_300_A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-ampDAP_50_A.end2.fastq.gz	HALO-Green-ampDAP_50_A.end1.fastq.gz	HALO-Green-ampDAP_50_A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-DAP_100_C.end2.fastq.gz	HALO-Green-DAP_100_C.end1.fastq.gz	HALO-Green-DAP_100_C.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-DAP_150_D.end2.fastq.gz	HALO-Green-DAP_150_D.end1.fastq.gz	HALO-Green-DAP_150_D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-DAP_300_D.end2.fastq.gz	HALO-Green-DAP_300_D.end1.fastq.gz	HALO-Green-DAP_300_D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Green-DAP_50_D.end2.fastq.gz	HALO-Green-DAP_50_D.end1.fastq.gz	HALO-Green-DAP_50_D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Red-DAP_100_E.end2.fastq.gz	HALO-Red-DAP_100_E.end1.fastq.gz	HALO-Red-DAP_100_E.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Red-DAP_150_G.end2.fastq.gz	HALO-Red-DAP_150_G.end1.fastq.gz	HALO-Red-DAP_150_G.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Red-DAP_300_G.end2.fastq.gz	HALO-Red-DAP_300_G.end1.fastq.gz	HALO-Red-DAP_300_G.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
HALO-Red-DAP_50_G.end2.fastq.gz	HALO-Red-DAP_50_G.end1.fastq.gz	HALO-Red-DAP_50_G.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-ampDAP_100_B.end2.fastq.gz	MBD5-Green-ampDAP_100_B.end1.fastq.gz	MBD5-Green-ampDAP_100_B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-ampDAP_150_B.end2.fastq.gz	MBD5-Green-ampDAP_150_B.end1.fastq.gz	MBD5-Green-ampDAP_150_B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-ampDAP_300_B.end2.fastq.gz	MBD5-Green-ampDAP_300_B.end1.fastq.gz	MBD5-Green-ampDAP_300_B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-ampDAP_50_B.end2.fastq.gz	MBD5-Green-ampDAP_50_B.end1.fastq.gz	MBD5-Green-ampDAP_50_B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-DAP_100_D.end2.fastq.gz	MBD5-Green-DAP_100_D.end1.fastq.gz	MBD5-Green-DAP_100_D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-DAP_150_E.end2.fastq.gz	MBD5-Green-DAP_150_E.end1.fastq.gz	MBD5-Green-DAP_150_E.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-DAP_300_E.end2.fastq.gz	MBD5-Green-DAP_300_E.end1.fastq.gz	MBD5-Green-DAP_300_E.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Green-DAP_50_E.end2.fastq.gz	MBD5-Green-DAP_50_E.end1.fastq.gz	MBD5-Green-DAP_50_E.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Red-DAP_100_F.end2.fastq.gz	MBD5-Red-DAP_100_F.end1.fastq.gz	MBD5-Red-DAP_100_F.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Red-DAP_150_H.end2.fastq.gz	MBD5-Red-DAP_150_H.end1.fastq.gz	MBD5-Red-DAP_150_H.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Red-DAP_300_H.end2.fastq.gz	MBD5-Red-DAP_300_H.end1.fastq.gz	MBD5-Red-DAP_300_H.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
MBD5-Red-DAP_50_H.end2.fastq.gz	MBD5-Red-DAP_50_H.end1.fastq.gz	MBD5-Red-DAP_50_H.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-APETALA2a	Red-APETALA2a.end1.fastq.gz	Red-APETALA2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-ARF4	Red-ARF4.end1.fastq.gz	Red-ARF4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-BES1_BZR1hp2	Red-BES1_BZR1hp2.end1.fastq.gz	Red-BES1_BZR1hp2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-BHLH1	Red-BHLH1.end1.fastq.gz	Red-BHLH1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-CBF2	Red-CBF2.end1.fastq.gz	Red-CBF2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-CIP2a	Red-CIP2a.end1.fastq.gz	Red-CIP2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-cip2b	Red-cip2b.end1.fastq.gz	Red-cip2b.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-CNR	Red-CNR.end1.fastq.gz	Red-CNR.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-CZFP1	Red-CZFP1.end1.fastq.gz	Red-CZFP1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Dof4	Red-Dof4.end1.fastq.gz	Red-Dof4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-DREB3	Red-DREB3.end1.fastq.gz	Red-DREB3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-EIL1	Red-EIL1.end1.fastq.gz	Red-EIL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-EIL2	Red-EIL2.end1.fastq.gz	Red-EIL2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-EIL3	Red-EIL3.end1.fastq.gz	Red-EIL3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-EIL4	Red-EIL4.end1.fastq.gz	Red-EIL4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-ERF10	Red-ERF10.end1.fastq.gz	Red-ERF10.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-ERF9	Red-ERF9.end1.fastq.gz	Red-ERF9.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-GRAS10	Red-GRAS10.end1.fastq.gz	Red-GRAS10.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-GRAS12	Red-GRAS12.end1.fastq.gz	Red-GRAS12.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-GRAS4	Red-GRAS4.end1.fastq.gz	Red-GRAS4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-gras6	Red-gras6.end1.fastq.gz	Red-gras6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-HALO	Red-HALO.end1.fastq.gz	Red-HALO.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-JERF1	Red-JERF1.end1.fastq.gz	Red-JERF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LAT61	Red-LAT61.end1.fastq.gz	Red-LAT61.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LES1	Red-LES1.end1.fastq.gz	Red-LES1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LeT12	Red-LeT12.end1.fastq.gz	Red-LeT12.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LeZIP2	Red-LeZIP2.end1.fastq.gz	Red-LeZIP2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LOB1	Red-LOB1.end1.fastq.gz	Red-LOB1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LOB38	Red-LOB38.end1.fastq.gz	Red-LOB38.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LOB42	Red-LOB42.end1.fastq.gz	Red-LOB42.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-LSD1	Red-LSD1.end1.fastq.gz	Red-LSD1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-MADS-MC	Red-MADS-MC.end1.fastq.gz	Red-MADS-MC.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-MADS-RIN	Red-MADS-RIN.end1.fastq.gz	Red-MADS-RIN.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-MADS1	Red-MADS1.end1.fastq.gz	Red-MADS1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-MBD5	Red-MBD5.end1.fastq.gz	Red-MBD5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-MBP7	Red-MBP7.end1.fastq.gz	Red-MBP7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-NAC-NOR	Red-NAC-NOR.end1.fastq.gz	Red-NAC-NOR.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-NAC6	Red-NAC6.end1.fastq.gz	Red-NAC6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-NF-YB-3	Red-NF-YB-3.end1.fastq.gz	Red-NF-YB-3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-PTI4	Red-PTI4.end1.fastq.gz	Red-PTI4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SCL32-like	Red-SCL32-like.end1.fastq.gz	Red-SCL32-like.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SEPALLATA3	Red-SEPALLATA3.end1.fastq.gz	Red-SEPALLATA3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_C_4	Red-Sl-ERF_C_4.end1.fastq.gz	Red-Sl-ERF_C_4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_C_6	Red-Sl-ERF_C_6.end1.fastq.gz	Red-Sl-ERF_C_6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_E_4	Red-Sl-ERF_E_4.end1.fastq.gz	Red-Sl-ERF_E_4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_F_2	Red-Sl-ERF_F_2.end1.fastq.gz	Red-Sl-ERF_F_2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_F_3	Red-Sl-ERF_F_3.end1.fastq.gz	Red-Sl-ERF_F_3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_F_4	Red-Sl-ERF_F_4.end1.fastq.gz	Red-Sl-ERF_F_4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-Sl-ERF_F_5	Red-Sl-ERF_F_5.end1.fastq.gz	Red-Sl-ERF_F_5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlBEL1	Red-SlBEL1.end1.fastq.gz	Red-SlBEL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlbHLH014	Red-SlbHLH014.end1.fastq.gz	Red-SlbHLH014.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlbHLH138	Red-SlbHLH138.end1.fastq.gz	Red-SlbHLH138.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlbHLH147	Red-SlbHLH147.end1.fastq.gz	Red-SlbHLH147.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlC3H11	Red-SlC3H11.end1.fastq.gz	Red-SlC3H11.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlC3H48	Red-SlC3H48.end1.fastq.gz	Red-SlC3H48.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlCOL1	Red-SlCOL1.end1.fastq.gz	Red-SlCOL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlDof14	Red-SlDof14.end1.fastq.gz	Red-SlDof14.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlDRP1	Red-SlDRP1.end1.fastq.gz	Red-SlDRP1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF1	Red-SlERF1.end1.fastq.gz	Red-SlERF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF1a-1	Red-SlERF1a-1.end1.fastq.gz	Red-SlERF1a-1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF1a-2	Red-SlERF1a-2.end1.fastq.gz	Red-SlERF1a-2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF36	Red-SlERF36.end1.fastq.gz	Red-SlERF36.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF4-1	Red-SlERF4-1.end1.fastq.gz	Red-SlERF4-1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF4-2	Red-SlERF4-2.end1.fastq.gz	Red-SlERF4-2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlERF5	Red-SlERF5.end1.fastq.gz	Red-SlERF5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlGABL2	Red-SlGABL2.end1.fastq.gz	Red-SlGABL2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlGABL4	Red-SlGABL4.end1.fastq.gz	Red-SlGABL4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlGATA9_1	Red-SlGATA9_1.end1.fastq.gz	Red-SlGATA9_1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlGATA9_2	Red-SlGATA9_2.end1.fastq.gz	Red-SlGATA9_2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlGRAS3	Red-SlGRAS3.end1.fastq.gz	Red-SlGRAS3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlGT2	Red-SlGT2.end1.fastq.gz	Red-SlGT2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlHB1	Red-SlHB1.end1.fastq.gz	Red-SlHB1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlHZIP2	Red-SlHZIP2.end1.fastq.gz	Red-SlHZIP2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlHZIP3	Red-SlHZIP3.end1.fastq.gz	Red-SlHZIP3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMADF1	Red-SlMADF1.end1.fastq.gz	Red-SlMADF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYB44	Red-SlMYB44.end1.fastq.gz	Red-SlMYB44.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYB70	Red-SlMYB70.end1.fastq.gz	Red-SlMYB70.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYB91	Red-SlMYB91.end1.fastq.gz	Red-SlMYB91.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYBL1	Red-SlMYBL1.end1.fastq.gz	Red-SlMYBL1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYBL2	Red-SlMYBL2.end1.fastq.gz	Red-SlMYBL2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYBL3	Red-SlMYBL3.end1.fastq.gz	Red-SlMYBL3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlMYBL4	Red-SlMYBL4.end1.fastq.gz	Red-SlMYBL4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlNAM1	Red-SlNAM1.end1.fastq.gz	Red-SlNAM1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlNAM2	Red-SlNAM2.end1.fastq.gz	Red-SlNAM2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlNAM3	Red-SlNAM3.end1.fastq.gz	Red-SlNAM3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlNAM4	Red-SlNAM4.end1.fastq.gz	Red-SlNAM4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlNAM5	Red-SlNAM5.end1.fastq.gz	Red-SlNAM5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlTCP12	Red-SlTCP12.end1.fastq.gz	Red-SlTCP12.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlTCP15	Red-SlTCP15.end1.fastq.gz	Red-SlTCP15.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlTCP18	Red-SlTCP18.end1.fastq.gz	Red-SlTCP18.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWOX14	Red-SlWOX14.end1.fastq.gz	Red-SlWOX14.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY11	Red-SlWRKY11.end1.fastq.gz	Red-SlWRKY11.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY23	Red-SlWRKY23.end1.fastq.gz	Red-SlWRKY23.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY40	Red-SlWRKY40.end1.fastq.gz	Red-SlWRKY40.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY41	Red-SlWRKY41.end1.fastq.gz	Red-SlWRKY41.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY6	Red-SlWRKY6.end1.fastq.gz	Red-SlWRKY6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY7	Red-SlWRKY7.end1.fastq.gz	Red-SlWRKY7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlWRKY81	Red-SlWRKY81.end1.fastq.gz	Red-SlWRKY81.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlYABBY2a	Red-SlYABBY2a.end1.fastq.gz	Red-SlYABBY2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZF1	Red-SlZF1.end1.fastq.gz	Red-SlZF1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZF2	Red-SlZF2.end1.fastq.gz	Red-SlZF2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZF3	Red-SlZF3.end1.fastq.gz	Red-SlZF3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZF6	Red-SlZF6.end1.fastq.gz	Red-SlZF6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZFCL3	Red-SlZFCL3.end1.fastq.gz	Red-SlZFCL3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZIP1	Red-SlZIP1.end1.fastq.gz	Red-SlZIP1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZIP3	Red-SlZIP3.end1.fastq.gz	Red-SlZIP3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZIP5	Red-SlZIP5.end1.fastq.gz	Red-SlZIP5.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZIP6	Red-SlZIP6.end1.fastq.gz	Red-SlZIP6.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SlZIP7	Red-SlZIP7.end1.fastq.gz	Red-SlZIP7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfA2	Red-SolycHsfA2.end1.fastq.gz	Red-SolycHsfA2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfA4a	Red-SolycHsfA4a.end1.fastq.gz	Red-SolycHsfA4a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfA6b	Red-SolycHsfA6b.end1.fastq.gz	Red-SolycHsfA6b.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfA7	Red-SolycHsfA7.end1.fastq.gz	Red-SolycHsfA7.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfB1	Red-SolycHsfB1.end1.fastq.gz	Red-SolycHsfB1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfB2a	Red-SolycHsfB2a.end1.fastq.gz	Red-SolycHsfB2a.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfB2b	Red-SolycHsfB2b.end1.fastq.gz	Red-SolycHsfB2b.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-SolycHsfC1	Red-SolycHsfC1.end1.fastq.gz	Red-SolycHsfC1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-TDR4	Red-TDR4.end1.fastq.gz	Red-TDR4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-TM29	Red-TM29.end1.fastq.gz	Red-TM29.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes
Red-VAHOX1	Red-VAHOX1.end1.fastq.gz	Red-VAHOX1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/bowtie-indexes/Solanum_lycopersicum.SL2.40.19	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes