==============================================
2018-06-06 18:45:04
Options:
--f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt gd7-2-4h-cic-ChIP-nexus-rep1-GSM2808648/aligned.25mers.unique.bam --out gd7-2-4h-cic-ChIP-nexus-rep1-GSM2808648/aligned.25mers.unique.GPS 

==============================================
2018-06-06 18:45:44
Options:
--f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt toll10b-2-4h-cic-ChIP-nexus-rep1-GSM2808647/aligned.25mers.unique.bam --out toll10b-2-4h-cic-ChIP-nexus-rep1-GSM2808647/aligned.25mers.unique.GPS 

==============================================
2018-06-06 18:46:43
Options:
--f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt toll10b-2-4h-dl-ChIP-nexus-rep1-GSM2808646/aligned.25mers.unique.bam --out toll10b-2-4h-dl-ChIP-nexus-rep1-GSM2808646/aligned.25mers.unique.GPS 

Original read count stats:
_IP  	Bases: 18482033	HitCounts: 4.2177437E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 88 reads.


The genome is segmented into 212554 regions for analysis.

Running with 4 threads ...


Original read count stats:
_IP  	Bases: 20039997	HitCounts: 4.9718794E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 97 reads.


The genome is segmented into 211214 regions for analysis.

Running with 4 threads ...

---------------------------
Events discovered 
Significant:	2021
Insignificant:	26
Filtered:	357

Finish binding event prediction: 5.9m

Refine read distribution from 1082 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	7099
Insignificant:	1653
Filtered:	5

Finish binding event prediction: 3.9m

Refine read distribution from 2000 binding events. 

---------------------------
Events discovered 
Significant:	2421
Insignificant:	41
Filtered:	376

Finish binding event prediction: 6.7m

Refine read distribution from 1396 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	5130
Insignificant:	1236
Filtered:	11

Finish binding event prediction: 5.0m

Refine read distribution from 2000 binding events. 


Original read count stats:
_IP  	Bases: 31409262	HitCounts: 6.9440504E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 186 reads.


The genome is segmented into 208774 regions for analysis.

Running with 4 threads ...

---------------------------
Events discovered 
Significant:	11851
Insignificant:	103
Filtered:	1075

Finish binding event prediction: 15.3m

Refine read distribution from 2000 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	17656
Insignificant:	3034
Filtered:	73

Finish binding event prediction: 10.8m

Refine read distribution from 2000 binding events.