==============================================
2018-06-06 14:44:57
Options:
--min 10 --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt GM12878_RAD21_nexus-GSM1872890/aligned.36mers.unique.bam --out GM12878_RAD21_nexus-GSM1872890/aligned.36mers.unique.GPS 

==============================================
2018-06-06 14:45:16
Options:
--min 10 --f SAM --d /oak/stanford/groups/akundaje/marinovg/programs/gem.v3.2/Read_Distribution_ChIP-exo.txt --expt GM12878_Smc3_nexus-GSM1872891/aligned.36mers.unique.bam --out GM12878_Smc3_nexus-GSM1872891/aligned.36mers.unique.GPS 

Original read count stats:
_IP  	Bases: 15986654	HitCounts: 2.543343E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 8 reads.


The genome is segmented into 792695 regions for analysis.

Running with 4 threads ...


Original read count stats:
_IP  	Bases: 22493286	HitCounts: 3.173349E7

At Poisson p-value 1.0e-03, in a 301bp window, expect 9 reads.


The genome is segmented into 1746037 regions for analysis.

Running with 4 threads ...

---------------------------
Events discovered 
Significant:	39444
Insignificant:	559
Filtered:	9594

Finish binding event prediction: 7.8m

Refine read distribution from 2000 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	73947
Insignificant:	304
Filtered:	8220

Finish binding event prediction: 9.6m

Refine read distribution from 2000 binding events. 


Running with 4 threads ...

---------------------------
Events discovered 
Significant:	32406
Insignificant:	4340
Filtered:	10

Finish binding event prediction: 3.1m

Refine read distribution from 2000 binding events. 

---------------------------
Events discovered 
Significant:	39568
Insignificant:	3075
Filtered:	20

Finish binding event prediction: 3.4m

Refine read distribution from 2000 binding events.