python /oak/stanford/groups/akundaje/marinovg/programs/PeakXus/src/PeakXus.py exo_BATF_rep1-GSM2259184/aligned.36mers.unique.bam exo_BATF_rep1-GSM2259184/peakXus/ /oak/stanford/groups/akundaje/marinovg/genomes/mm10/mm10.chrom.sizes --blacklist /oak/stanford/groups/akundaje/marinovg/genomes/blacklists/mm10.blacklist.bed
python /oak/stanford/groups/akundaje/marinovg/programs/PeakXus/src/PeakXus.py exo_BATF_rep2-GSM2259185/aligned.36mers.unique.bam exo_BATF_rep2-GSM2259185/peakXus/ /oak/stanford/groups/akundaje/marinovg/genomes/mm10/mm10.chrom.sizes --blacklist /oak/stanford/groups/akundaje/marinovg/genomes/blacklists/mm10.blacklist.bed
python /oak/stanford/groups/akundaje/marinovg/programs/PeakXus/src/PeakXus.py exo_BATF_rep3-GSM2259186/aligned.36mers.unique.bam exo_BATF_rep3-GSM2259186/peakXus/ /oak/stanford/groups/akundaje/marinovg/genomes/mm10/mm10.chrom.sizes --blacklist /oak/stanford/groups/akundaje/marinovg/genomes/blacklists/mm10.blacklist.bed
python /oak/stanford/groups/akundaje/marinovg/programs/PeakXus/src/PeakXus.py exo_BATF_rep4-GSM2259187/aligned.36mers.unique.bam exo_BATF_rep4-GSM2259187/peakXus/ /oak/stanford/groups/akundaje/marinovg/genomes/mm10/mm10.chrom.sizes --blacklist /oak/stanford/groups/akundaje/marinovg/genomes/blacklists/mm10.blacklist.bed
python /oak/stanford/groups/akundaje/marinovg/programs/PeakXus/src/PeakXus.py exo_IRF4_rep1-GSM2259188/aligned.36mers.unique.bam exo_IRF4_rep1-GSM2259188/peakXus/ /oak/stanford/groups/akundaje/marinovg/genomes/mm10/mm10.chrom.sizes --blacklist /oak/stanford/groups/akundaje/marinovg/genomes/blacklists/mm10.blacklist.bed
python /oak/stanford/groups/akundaje/marinovg/programs/PeakXus/src/PeakXus.py exo_IRF4_rep2-GSM2259189/aligned.36mers.unique.bam exo_IRF4_rep2-GSM2259189/peakXus/ /oak/stanford/groups/akundaje/marinovg/genomes/mm10/mm10.chrom.sizes --blacklist /oak/stanford/groups/akundaje/marinovg/genomes/blacklists/mm10.blacklist.bed