python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== K562-ATAC-seq-02-Control.merged.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-ATAC-seq-02-Control.merged.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py ==== K562-ATAC-seq-02-Control.dedup.merged.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-ATAC-seq-02-Control.dedup.merged.wig -notitle -uniqueBAM -RPM
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py ==== K562-ATAC-seq-02-Control.merged.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-ATAC-seq-02-Control.merged.5p.wig -notitle -uniqueBAM -RPM -shift 5
python /oak/stanford/groups/akundaje/marinovg/code/make5primeWigglefromBAM-NH.py ==== K562-ATAC-seq-02-Control.dedup.merged.bam /oak/stanford/groups/akundaje/marinovg/genomes/hg19/hg19.chrom.sizes K562-ATAC-seq-02-Control.dedup.merged.5p.wig -notitle -uniqueBAM -RPM -shift 5