Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=ATAC-seq_K562_Control-rep1-GSM2695560.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=ATAC-seq_K562_Control-rep1-GSM2695560.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=ATAC-seq_K562_Control-rep2-GSM2695561.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=ATAC-seq_K562_Control-rep2-GSM2695561.36mers.unique.QC
Rscript /oak/stanford/groups/akundaje/marinovg/code/spp/spp_package/run_spp.R -c=ATAC-seq_K562_Control-rep3-GSM2695562.36mers.unique.bam -p=8 -savp -rf -s=-0:2:400 -out=ATAC-seq_K562_Control-rep3-GSM2695562.36mers.unique.QC