/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks100.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks101.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks102.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks103.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks104.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks105.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks106.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks107.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks108.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks109.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks10.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks110.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks111.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks112.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks113.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks114.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks115.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks116.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks117.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks118.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks119.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks11.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks120.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks121.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks122.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks123.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks124.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks125.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks126.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks127.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks128.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks129.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks12.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks130.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks131.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks132.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks133.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks134.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks135.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks136.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks137.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks138.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks139.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks13.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks140.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks141.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks142.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks143.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks144.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks145.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks146.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks147.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks148.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks149.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks14.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks150.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks151.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks152.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks153.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks154.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks155.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks156.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks157.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks158.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks159.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks15.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks160.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks161.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks162.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks163.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks164.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks165.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks166.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks167.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks168.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks169.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks16.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks170.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks171.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks172.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks173.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks174.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks175.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks176.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks177.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks178.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks179.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks17.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks180.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks181.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks182.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks183.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks184.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks185.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks186.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks187.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks188.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks189.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks18.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks190.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks191.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks192.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks193.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks194.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks195.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks196.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks197.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks198.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks199.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks19.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks1.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks200.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks201.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks202.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks203.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks204.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks205.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks206.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks207.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks208.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks209.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks20.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks210.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks211.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks212.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks213.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks214.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks215.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks216.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks217.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks218.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks219.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks21.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks220.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks221.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks222.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks223.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks224.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks225.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks226.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks227.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks228.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks229.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks22.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks230.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks231.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks232.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks233.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks234.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks235.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks236.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks237.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks238.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks239.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks23.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks240.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks241.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks242.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks243.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks244.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks245.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks246.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks247.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks248.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks249.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks24.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks250.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks251.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks252.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks253.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks254.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks255.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks256.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks257.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks258.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks259.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks25.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks260.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks261.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks262.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks263.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks264.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks265.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks266.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks267.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks268.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks269.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks26.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks270.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks271.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks272.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks273.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks274.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks275.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks276.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks277.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks278.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks279.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks27.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks280.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks281.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks282.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks283.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks284.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks285.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks286.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks287.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks288.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks289.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks28.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks290.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks291.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks292.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks293.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks294.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks295.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks296.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks297.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks298.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks299.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks29.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks2.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks300.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks301.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks302.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks303.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks304.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks305.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks306.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks307.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks308.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks309.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks30.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks310.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks311.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks312.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks313.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks314.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks315.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks316.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks317.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks318.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks319.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks31.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks320.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks321.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks322.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks323.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks324.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks325.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks326.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks327.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks328.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks329.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks32.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks330.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks331.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks332.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks333.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks334.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks335.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks336.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks337.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks338.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks339.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks33.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks340.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks341.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks342.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks343.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks344.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks345.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks346.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks347.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks348.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks349.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks34.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks350.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks351.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks352.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks353.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks354.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks355.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks356.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks357.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks358.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks359.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks35.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks360.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks361.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks362.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks363.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks364.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks365.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks366.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks367.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks368.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks369.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks36.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks370.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks371.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks372.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks373.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks374.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks375.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks376.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks377.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks378.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks379.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks37.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks380.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks381.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks382.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks383.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks384.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks385.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks386.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks387.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks388.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks389.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks38.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks390.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks391.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks392.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks393.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks394.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks395.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks396.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks397.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks398.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks399.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks39.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks3.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks400.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks40.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks41.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks42.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks43.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks44.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks45.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks46.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks47.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks48.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks49.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks4.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks50.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks51.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks52.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks53.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks54.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks55.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks56.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks57.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks58.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks59.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks5.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks60.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks61.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks62.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks63.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks64.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks65.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks66.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks67.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks68.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks69.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks6.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks70.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks71.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks72.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks73.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks74.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks75.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks76.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks77.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks78.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks79.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks7.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks80.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks81.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks82.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks83.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks84.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks85.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks86.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks87.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks88.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks89.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks8.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks90.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks91.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks92.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks93.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks94.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks95.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks96.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks97.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks98.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks99.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks9.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks100.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks100.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks101.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks101.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks102.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks102.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks103.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks103.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks104.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks104.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks105.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks105.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks106.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks106.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks107.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks107.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks108.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks108.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks109.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks109.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks10.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks10.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks110.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks110.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks111.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks111.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks112.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks112.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks113.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks113.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks114.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks114.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks115.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks115.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks116.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks116.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks117.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks117.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks118.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks118.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks119.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks119.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks11.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks11.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks120.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks120.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks121.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks121.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks122.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks122.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks123.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks123.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks124.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks124.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks125.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks125.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks126.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks126.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks127.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks127.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks128.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks128.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks129.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks129.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks12.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks12.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks130.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks130.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks131.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks131.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks132.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks132.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks133.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks133.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks134.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks134.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks135.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks135.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks136.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks136.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks137.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks137.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks138.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks138.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks139.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks139.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks13.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks13.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks140.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks140.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks141.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks141.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks142.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks142.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks143.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks143.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks144.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks144.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks145.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks145.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks146.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks146.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks147.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks147.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks148.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks148.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks149.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks149.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks14.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks14.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks150.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks150.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks151.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks151.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks152.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks152.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks153.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks153.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks154.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks154.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks155.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks155.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks156.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks156.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks157.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks157.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks158.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks158.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks159.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks159.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks15.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks15.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks160.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks160.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks161.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks161.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks162.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks162.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks163.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks163.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks164.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks164.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks165.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks165.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks166.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks166.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks167.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks167.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks168.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks168.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks169.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks169.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks16.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks16.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks170.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks170.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks171.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks171.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks172.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks172.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks173.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks173.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks174.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks174.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks175.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks175.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks176.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks176.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks177.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks177.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks178.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks178.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks179.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks179.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks17.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks17.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks180.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks180.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks181.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks181.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks182.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks182.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks183.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks183.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks184.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks184.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks185.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks185.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks186.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks186.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks187.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks187.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks188.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks188.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks189.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks189.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks18.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks18.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks190.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks190.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks191.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks191.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks192.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks192.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks193.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks193.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks194.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks194.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks195.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks195.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks196.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks196.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks197.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks197.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks198.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks198.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks199.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks199.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks19.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks19.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks1.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks1.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks200.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks200.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks201.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks201.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks202.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks202.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks203.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks203.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks204.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks204.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks205.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks205.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks206.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks206.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks207.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks207.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks208.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks208.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks209.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks209.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks20.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks20.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks210.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks210.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks211.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks211.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks212.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks212.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks213.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks213.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks214.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks214.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks215.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks215.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks216.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks216.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks217.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks217.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks218.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks218.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks219.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks219.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks21.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks21.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks220.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks220.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks221.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks221.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks222.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks222.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks223.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks223.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks224.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks224.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks225.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks225.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks226.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks226.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks227.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks227.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks228.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks228.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks229.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks229.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks22.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks22.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks230.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks230.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks231.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks231.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks232.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks232.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks233.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks233.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks234.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks234.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks235.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks235.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks236.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks236.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks237.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks237.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks238.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks238.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks239.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks239.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks23.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks23.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks240.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks240.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks241.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks241.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks242.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks242.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks243.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks243.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks244.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks244.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks245.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks245.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks246.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks246.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks247.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks247.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks248.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks248.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks249.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks249.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks24.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks24.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks250.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks250.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks251.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks251.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks252.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks252.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks253.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks253.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks254.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks254.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks255.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks255.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks256.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks256.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks257.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks257.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks258.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks258.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks259.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks259.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks25.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks25.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks260.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks260.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks261.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks261.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks262.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks262.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks263.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks263.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks264.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks264.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks265.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks265.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks266.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks266.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks267.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks267.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks268.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks268.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks269.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks269.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks26.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks26.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks270.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks270.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks271.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks271.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks272.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks272.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks273.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks273.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks274.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks274.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks275.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks275.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks276.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks276.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks277.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks277.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks278.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks278.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks279.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks279.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks27.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks27.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks280.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks280.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks281.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks281.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks282.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks282.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks283.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks283.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks284.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks284.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks285.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks285.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks286.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks286.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks287.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks287.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks288.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks288.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks289.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks289.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks28.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks28.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks290.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks290.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks291.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks291.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks292.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks292.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks293.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks293.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks294.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks294.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks295.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks295.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks296.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks296.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks297.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks297.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks298.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks298.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks299.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks299.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks29.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks29.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks2.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks2.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks300.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks300.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks301.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks301.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks302.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks302.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks303.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks303.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks304.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks304.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks305.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks305.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks306.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks306.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks307.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks307.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks308.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks308.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks309.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks309.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks30.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks30.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks310.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks310.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks311.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks311.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks312.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks312.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks313.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks313.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks314.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks314.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks315.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks315.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks316.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks316.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks317.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks317.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks318.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks318.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks319.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks319.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks31.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks31.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks320.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks320.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks321.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks321.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks322.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks322.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks323.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks323.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks324.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks324.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks325.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks325.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks326.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks326.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks327.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks327.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks328.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks328.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks329.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks329.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks32.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks32.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks330.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks330.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks33.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks33.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks34.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks34.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks35.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks35.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks36.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks36.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks37.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks37.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks38.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks38.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks39.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks39.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks3.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks3.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks40.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks40.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks41.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks41.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks42.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks42.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks43.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks43.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks44.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks44.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks45.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks45.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks46.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks46.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks47.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks47.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks48.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks48.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks49.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks49.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks4.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks4.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks50.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks50.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks51.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks51.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks52.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks52.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks53.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks53.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks54.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks54.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks55.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks55.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks56.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks56.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks57.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks57.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks58.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks58.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks59.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks59.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks5.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks5.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks60.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks60.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks61.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks61.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks62.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks62.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks63.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks63.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks64.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks64.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks65.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks65.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks66.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks66.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks67.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks67.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks68.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks68.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks69.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks69.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks6.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks6.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks70.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks70.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks71.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks71.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks72.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks72.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks73.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks73.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks74.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks74.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks75.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks75.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks76.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks76.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks77.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks77.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks78.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks78.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks79.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks79.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks7.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks7.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks80.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks80.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks81.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks81.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks82.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks82.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks83.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks83.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks84.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks84.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks85.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks85.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks86.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks86.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks87.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks87.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks88.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks88.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks89.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks89.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks8.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks8.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks90.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks90.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks91.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks91.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks92.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks92.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks93.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks93.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks94.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks94.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks95.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks95.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks96.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks96.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks97.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks97.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks98.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks98.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks99.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks99.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks9.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/hard_filtered_transcripts.min60aa_standardCode_ORF.chunks9.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks100.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks101.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks102.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks103.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks104.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks105.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks106.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks107.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks108.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks109.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks10.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks110.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks111.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks112.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks113.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks114.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks115.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks116.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks117.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks118.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks119.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks11.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks120.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks121.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks122.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks123.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks124.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks125.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks126.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks127.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks128.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks129.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks12.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks130.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks131.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks132.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks133.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks134.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks135.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks136.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks137.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks138.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks139.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks13.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks140.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks141.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks142.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks143.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks144.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks145.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks146.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks147.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks148.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks149.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks14.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks150.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks151.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks152.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks153.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks154.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks155.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks156.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks157.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks158.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks159.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks15.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks160.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks161.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks162.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks163.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks164.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks165.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks166.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks167.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks168.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks169.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks16.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks170.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks171.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks172.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks173.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks174.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks175.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks176.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks177.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks178.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks179.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks17.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks180.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks181.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks182.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks183.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks184.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks185.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks186.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks187.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks188.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks189.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks18.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks190.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks191.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks192.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks193.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks194.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks195.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks196.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks197.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks198.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks199.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks19.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks1.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks200.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks201.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks202.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks203.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks204.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks205.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks206.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks207.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks208.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks209.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks20.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks210.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks211.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks212.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks213.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks214.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks215.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks216.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks217.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks218.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks219.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks21.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks220.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks221.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks222.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks223.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks224.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks225.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks226.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks227.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks228.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks229.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks22.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks230.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks231.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks232.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks233.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks234.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks235.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks236.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks237.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks238.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks239.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks23.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks240.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks241.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks242.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks243.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks244.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks245.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks246.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks247.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks248.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks249.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks24.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks250.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks251.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks252.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks253.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks254.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks255.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks256.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks257.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks258.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks259.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks25.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks260.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks261.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks262.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks263.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks264.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks265.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks266.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks267.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks268.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks269.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks26.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks270.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks271.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks272.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks273.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks274.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks275.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks276.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks277.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks278.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks279.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks27.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks280.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks281.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks282.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks283.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks284.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks285.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks286.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks287.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks288.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks289.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks28.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks290.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks291.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks292.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks293.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks294.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks295.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks296.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks297.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks298.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks299.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks29.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks2.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks300.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks301.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks302.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks303.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks304.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks305.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks306.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks307.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks308.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks309.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks30.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks310.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks311.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks312.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks313.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks314.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks315.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks316.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks317.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks318.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks319.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks31.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks320.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks321.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks322.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks323.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks324.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks325.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks326.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks327.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks328.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks329.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks32.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks330.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks331.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks332.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks333.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks334.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks335.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks336.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks337.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks338.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks339.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks33.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks340.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks341.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks342.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks343.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks344.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks345.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks346.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks347.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks348.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks349.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks34.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks350.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks351.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks352.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks353.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks354.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks355.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks356.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks357.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks358.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks359.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks35.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks360.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks361.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks362.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks363.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks364.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks365.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks366.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks367.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks368.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks369.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks36.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks370.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks371.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks372.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks373.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks374.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks375.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks376.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks377.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks378.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks379.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks37.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks380.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks381.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks382.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks383.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks384.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks385.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks386.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks387.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks388.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks389.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks38.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks390.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks391.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks392.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks393.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks394.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks395.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks396.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks397.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks398.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks399.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks39.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks3.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks400.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks401.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks401.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks401.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks402.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks402.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks402.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks403.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks403.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks403.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks404.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks404.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks404.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks405.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks405.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks405.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks406.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks406.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks406.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks407.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks407.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks407.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks408.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks408.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks408.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks409.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks409.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks409.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks40.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks410.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks410.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks410.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks411.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks411.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks411.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks412.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks412.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks412.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks413.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks413.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks413.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks414.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks414.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks414.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks415.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks415.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks415.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks416.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks416.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks416.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks417.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks417.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks417.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks418.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks418.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks418.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks419.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks419.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks419.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks41.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks420.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks420.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks420.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks421.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks421.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks421.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks422.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks422.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks422.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks423.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks423.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks423.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks424.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks424.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks424.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks425.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks425.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks425.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks426.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks426.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks426.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks427.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks427.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks427.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks428.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks428.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks428.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks429.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks429.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks429.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks42.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks430.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks430.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks430.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks431.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks431.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks431.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks432.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks432.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks432.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks433.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks433.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks433.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks434.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks434.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks434.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks435.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks435.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks435.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks436.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks436.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks436.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks437.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks437.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks437.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks438.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks438.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks438.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks439.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks439.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks439.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks43.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks440.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks440.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks440.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks441.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks441.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks441.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks442.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks442.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks442.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks443.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks443.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks443.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks444.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks444.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks444.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks445.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks445.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks445.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks446.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks446.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks446.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks447.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks447.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks447.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks448.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks448.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks448.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks449.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks449.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks449.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks44.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks450.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks450.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks450.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks451.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks451.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks451.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks452.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks452.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks452.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks453.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks453.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks453.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks454.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks454.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks454.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks455.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks455.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks455.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks456.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks456.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks456.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks457.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks457.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks457.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks458.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks458.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks458.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks459.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks459.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks459.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks45.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks460.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks460.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks460.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks461.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks461.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks461.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks462.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks462.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks462.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks463.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks463.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks463.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks464.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks464.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks464.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks465.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks465.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks465.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks466.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks466.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks466.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks467.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks467.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks467.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks468.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks468.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks468.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks469.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks469.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks469.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks46.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks470.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks470.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks470.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks471.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks471.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks471.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks472.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks472.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks472.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks473.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks473.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks473.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks474.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks474.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks474.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks475.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks475.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks475.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks476.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks476.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks476.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks477.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks477.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks477.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks478.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks478.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks478.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks479.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks479.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks479.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks47.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks480.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks480.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks480.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks481.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks481.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks481.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks482.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks482.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks482.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks48.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks49.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks4.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks50.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks51.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks52.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks53.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks54.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks55.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks56.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks57.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks58.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks59.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks5.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks60.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks61.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks62.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks63.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks64.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks65.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks66.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks67.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks68.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks69.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks6.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks70.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks71.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks72.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks73.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks74.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks75.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks76.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks77.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks78.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks79.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks7.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks80.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks81.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks82.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks83.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks84.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks85.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks86.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks87.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks88.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks89.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks8.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks90.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks91.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks92.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks93.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks94.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks95.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks96.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks97.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks98.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks99.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.6frame.chunks9.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks100.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks100.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks101.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks101.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks102.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks102.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks103.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks103.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks104.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks104.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks105.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks105.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks106.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks106.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks107.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks107.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks108.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks108.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks109.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks109.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks10.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks10.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks110.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks110.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks111.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks111.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks112.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks112.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks113.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks113.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks114.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks114.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks115.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks115.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks116.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks116.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks117.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks117.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks118.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks118.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks119.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks119.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks11.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks11.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks120.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks120.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks121.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks121.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks122.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks122.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks123.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks123.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks124.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks124.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks125.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks125.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks126.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks126.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks127.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks127.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks128.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks128.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks129.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks129.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks12.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks12.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks130.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks130.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks131.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks131.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks132.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks132.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks133.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks133.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks134.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks134.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks135.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks135.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks136.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks136.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks137.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks137.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks138.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks138.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks139.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks139.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks13.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks13.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks140.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks140.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks141.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks141.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks142.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks142.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks143.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks143.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks144.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks144.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks145.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks145.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks146.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks146.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks147.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks147.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks148.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks148.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks149.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks149.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks14.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks14.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks150.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks150.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks151.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks151.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks152.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks152.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks153.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks153.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks154.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks154.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks155.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks155.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks156.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks156.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks157.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks157.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks158.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks158.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks159.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks159.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks15.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks15.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks160.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks160.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks161.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks161.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks162.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks162.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks163.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks163.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks164.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks164.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks165.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks165.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks166.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks166.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks167.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks167.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks168.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks168.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks169.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks169.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks16.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks16.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks170.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks170.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks171.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks171.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks172.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks172.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks173.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks173.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks174.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks174.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks175.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks175.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks176.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks176.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks177.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks177.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks178.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks178.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks179.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks179.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks17.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks17.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks180.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks180.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks181.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks181.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks182.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks182.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks183.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks183.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks184.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks184.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks185.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks185.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks186.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks186.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks187.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks187.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks188.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks188.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks189.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks189.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks18.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks18.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks190.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks190.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks191.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks191.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks192.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks192.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks193.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks193.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks194.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks194.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks195.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks195.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks196.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks196.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks197.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks197.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks198.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks198.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks199.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks199.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks19.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks19.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks1.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks1.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks200.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks200.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks201.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks201.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks202.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks202.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks203.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks203.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks204.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks204.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks205.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks205.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks206.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks206.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks207.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks207.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks208.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks208.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks209.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks209.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks20.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks20.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks210.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks210.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks211.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks211.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks212.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks212.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks213.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks213.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks214.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks214.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks215.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks215.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks216.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks216.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks217.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks217.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks218.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks218.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks219.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks219.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks21.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks21.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks220.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks220.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks221.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks221.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks222.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks222.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks223.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks223.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks224.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks224.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks225.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks225.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks226.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks226.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks227.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks227.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks228.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks228.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks229.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks229.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks22.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks22.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks230.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks230.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks231.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks231.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks232.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks232.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks233.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks233.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks234.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks234.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks235.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks235.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks236.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks236.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks237.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks237.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks238.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks238.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks239.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks239.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks23.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks23.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks240.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks240.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks241.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks241.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks242.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks242.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks243.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks243.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks244.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks244.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks245.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks245.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks246.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks246.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks247.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks247.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks248.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks248.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks249.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks249.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks24.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks24.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks250.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks250.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks251.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks251.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks252.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks252.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks253.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks253.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks254.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks254.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks255.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks255.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks256.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks256.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks257.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks257.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks258.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks258.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks259.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks259.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks25.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks25.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks260.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks260.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks261.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks261.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks262.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks262.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks263.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks263.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks264.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks264.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks265.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks265.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks266.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks266.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks267.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks267.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks268.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks268.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks269.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks269.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks26.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks26.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks270.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks270.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks271.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks271.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks272.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks272.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks273.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks273.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks274.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks274.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks275.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks275.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks276.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks276.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks277.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks277.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks278.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks278.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks279.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks279.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks27.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks27.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks280.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks280.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks281.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks281.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks282.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks282.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks283.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks283.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks284.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks284.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks285.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks285.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks286.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks286.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks287.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks287.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks288.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks288.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks289.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks289.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks28.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks28.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks290.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks290.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks291.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks291.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks292.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks292.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks293.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks293.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks294.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks294.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks295.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks295.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks296.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks296.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks297.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks297.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks298.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks298.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks299.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks299.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks29.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks29.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks2.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks2.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks300.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks300.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks301.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks301.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks302.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks302.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks303.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks303.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks304.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks304.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks305.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks305.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks306.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks306.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks307.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks307.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks308.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks308.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks309.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks309.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks30.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks30.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks310.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks310.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks311.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks311.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks312.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks312.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks313.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks313.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks314.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks314.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks315.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks315.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks316.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks316.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks317.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks317.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks318.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks318.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks319.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks319.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks31.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks31.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks320.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks320.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks321.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks321.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks322.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks322.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks323.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks323.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks324.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks324.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks325.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks325.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks326.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks326.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks327.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks327.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks328.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks328.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks329.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks329.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks32.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks32.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks330.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks330.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks331.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks331.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks33.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks33.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks34.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks34.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks35.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks35.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks36.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks36.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks37.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks37.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks38.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks38.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks39.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks39.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks3.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks3.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks40.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks40.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks41.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks41.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks42.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks42.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks43.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks43.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks44.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks44.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks45.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks45.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks46.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks46.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks47.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks47.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks48.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks48.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks49.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks49.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks4.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks4.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks50.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks50.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks51.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks51.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks52.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks52.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks53.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks53.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks54.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks54.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks55.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks55.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks56.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks56.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks57.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks57.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks58.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks58.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks59.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks59.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks5.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks5.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks60.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks60.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks61.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks61.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks62.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks62.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks63.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks63.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks64.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks64.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks65.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks65.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks66.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks66.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks67.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks67.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks68.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks68.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks69.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks69.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks6.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks6.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks70.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks70.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks71.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks71.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks72.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks72.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks73.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks73.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks74.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks74.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks75.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks75.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks76.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks76.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks77.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks77.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks78.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks78.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks79.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks79.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks7.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks7.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks80.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks80.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks81.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks81.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks82.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks82.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks83.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks83.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks84.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks84.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks85.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks85.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks86.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks86.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks87.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks87.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks88.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks88.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks89.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks89.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks8.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks8.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks90.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks90.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks91.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks91.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks92.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks92.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks93.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks93.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks94.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks94.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks95.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks95.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks96.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks96.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks97.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks97.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks98.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks98.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks99.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks99.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks9.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/soft_filtered_transcripts.min60aa_standardCode_ORF.chunks9.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks100.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks100.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks101.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks101.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks102.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks102.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks103.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks103.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks104.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks104.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks105.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks105.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks106.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks106.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks107.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks107.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks108.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks108.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks109.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks109.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks10.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks10.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks110.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks110.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks111.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks111.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks112.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks112.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks113.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks113.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks114.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks114.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks115.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks115.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks116.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks116.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks117.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks117.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks118.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks118.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks119.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks119.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks11.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks11.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks120.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks120.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks121.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks121.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks122.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks122.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks123.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks123.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks124.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks124.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks125.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks125.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks126.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks126.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks127.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks127.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks128.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks128.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks129.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks129.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks12.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks12.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks130.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks130.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks131.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks131.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks132.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks132.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks133.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks133.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks134.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks134.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks135.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks135.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks136.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks136.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks137.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks137.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks138.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks138.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks139.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks139.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks13.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks13.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks140.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks140.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks141.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks141.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks142.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks142.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks143.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks143.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks144.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks144.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks145.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks145.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks146.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks146.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks147.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks147.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks148.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks148.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks149.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks149.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks14.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks14.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks150.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks150.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks151.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks151.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks152.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks152.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks153.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks153.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks154.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks154.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks155.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks155.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks156.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks156.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks157.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks157.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks158.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks158.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks159.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks159.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks15.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks15.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks160.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks160.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks161.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks161.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks162.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks162.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks163.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks163.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks164.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks164.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks165.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks165.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks166.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks166.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks167.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks167.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks168.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks168.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks169.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks169.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks16.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks16.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks170.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks170.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks171.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks171.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks172.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks172.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks173.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks173.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks174.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks174.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks175.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks175.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks176.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks176.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks177.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks177.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks178.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks178.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks179.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks179.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks17.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks17.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks180.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks180.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks181.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks181.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks182.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks182.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks183.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks183.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks184.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks184.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks185.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks185.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks186.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks186.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks187.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks187.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks188.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks188.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks189.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks189.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks18.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks18.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks190.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks190.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks191.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks191.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks192.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks192.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks193.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks193.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks194.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks194.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks195.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks195.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks196.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks196.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks197.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks197.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks198.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks198.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks199.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks199.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks19.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks19.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks1.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks1.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks200.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks200.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks201.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks201.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks202.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks202.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks203.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks203.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks204.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks204.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks205.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks205.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks206.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks206.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks207.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks207.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks208.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks208.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks209.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks209.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks20.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks20.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks210.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks210.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks211.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks211.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks212.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks212.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks213.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks213.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks214.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks214.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks215.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks215.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks216.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks216.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks217.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks217.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks218.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks218.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks219.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks219.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks21.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks21.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks220.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks220.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks221.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks221.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks222.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks222.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks223.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks223.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks224.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks224.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks225.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks225.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks226.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks226.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks227.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks227.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks228.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks228.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks229.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks229.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks22.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks22.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks230.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks230.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks231.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks231.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks232.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks232.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks233.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks233.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks234.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks234.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks235.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks235.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks236.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks236.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks237.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks237.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks238.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks238.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks239.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks239.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks23.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks23.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks240.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks240.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks241.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks241.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks242.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks242.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks243.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks243.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks244.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks244.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks245.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks245.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks246.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks246.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks247.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks247.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks248.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks248.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks249.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks249.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks24.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks24.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks250.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks250.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks251.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks251.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks252.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks252.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks253.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks253.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks254.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks254.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks255.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks255.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks256.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks256.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks257.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks257.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks258.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks258.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks259.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks259.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks25.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks25.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks260.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks260.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks261.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks261.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks262.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks262.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks263.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks263.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks264.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks264.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks265.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks265.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks266.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks266.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks267.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks267.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks268.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks268.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks269.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks269.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks26.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks26.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks270.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks270.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks271.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks271.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks272.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks272.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks273.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks273.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks274.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks274.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks275.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks275.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks276.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks276.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks277.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks277.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks278.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks278.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks279.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks279.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks27.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks27.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks280.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks280.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks281.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks281.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks282.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks282.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks283.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks283.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks284.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks284.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks285.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks285.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks286.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks286.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks287.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks287.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks288.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks288.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks289.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks289.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks28.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks28.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks290.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks290.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks291.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks291.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks292.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks292.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks293.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks293.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks294.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks294.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks295.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks295.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks296.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks296.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks297.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks297.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks298.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks298.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks299.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks299.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks29.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks29.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks2.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks2.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks300.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks300.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks301.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks301.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks302.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks302.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks303.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks303.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks304.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks304.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks305.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks305.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks306.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks306.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks307.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks307.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks308.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks308.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks309.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks309.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks30.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks30.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks310.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks310.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks311.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks311.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks312.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks312.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks313.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks313.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks314.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks314.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks315.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks315.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks316.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks316.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks317.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks317.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks318.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks318.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks319.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks319.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks31.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks31.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks320.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks320.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks321.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks321.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks322.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks322.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks323.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks323.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks324.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks324.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks325.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks325.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks326.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks326.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks327.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks327.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks328.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks328.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks329.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks329.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks32.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks32.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks330.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks330.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks331.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks331.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks332.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks332.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks333.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks333.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks334.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks334.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks335.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks335.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks336.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks336.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks337.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks337.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks338.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks338.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks339.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks339.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks33.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks33.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks340.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks340.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks341.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks341.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks342.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks342.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks343.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks343.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks344.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks344.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks345.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks345.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks346.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks346.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks347.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks347.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks348.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks348.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks349.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks349.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks34.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks34.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks350.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks350.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks351.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks351.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks352.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks352.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks353.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks353.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks354.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks354.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks355.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks355.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks356.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks356.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks357.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks357.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks358.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks358.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks359.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks359.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks35.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks35.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks360.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks360.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks361.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks361.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks362.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks362.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks363.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks363.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks364.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks364.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks365.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks365.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks366.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks366.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks367.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks367.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks368.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks368.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks369.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks369.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks36.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks36.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks370.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks370.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks371.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks371.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks372.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks372.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks373.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks373.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks374.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks374.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks375.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks375.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks376.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks376.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks377.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks377.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks378.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks378.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks379.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks379.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks37.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks37.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks380.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks380.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks381.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks381.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks382.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks382.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks383.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks383.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks384.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks384.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks385.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks385.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks386.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks386.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks387.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks387.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks388.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks388.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks389.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks389.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks38.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks38.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks390.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks390.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks391.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks391.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks392.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks392.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks393.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks393.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks394.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks394.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks395.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks395.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks396.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks396.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks397.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks397.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks398.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks398.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks399.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks399.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks39.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks39.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks3.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks3.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks400.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks400.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks401.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks401.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks401.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks402.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks402.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks402.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks403.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks403.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks403.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks404.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks404.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks404.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks405.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks405.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks405.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks406.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks406.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks406.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks407.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks407.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks407.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks408.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks408.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks408.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks409.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks409.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks409.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks40.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks40.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks410.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks410.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks410.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks411.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks411.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks411.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks412.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks412.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks412.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks413.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks413.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks413.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks414.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks414.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks414.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks415.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks415.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks415.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks416.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks416.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks416.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks417.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks417.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks417.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks418.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks418.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks418.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks419.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks419.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks419.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks41.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks41.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks420.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks420.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks420.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks421.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks421.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks421.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks422.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks422.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks422.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks423.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks423.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks423.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks424.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks424.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks424.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks425.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks425.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks425.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks426.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks426.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks426.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks427.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks427.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks427.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks428.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks428.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks428.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks429.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks429.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks429.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks42.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks42.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks430.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks430.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks430.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks431.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks431.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks431.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks432.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks432.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks432.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks433.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks433.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks433.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks434.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks434.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks434.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks435.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks435.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks435.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks436.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks436.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks436.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks437.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks437.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks437.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks438.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks438.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks438.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks439.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks439.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks439.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks43.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks43.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks440.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks440.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks440.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks441.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks441.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks441.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks442.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks442.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks442.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks443.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks443.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks443.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks444.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks444.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks444.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks44.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks44.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks45.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks45.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks46.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks46.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks47.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks47.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks48.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks48.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks49.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks49.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks4.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks4.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks50.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks50.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks51.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks51.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks52.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks52.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks53.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks53.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks54.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks54.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks55.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks55.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks56.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks56.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks57.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks57.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks58.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks58.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks59.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks59.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks5.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks5.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks60.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks60.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks61.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks61.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks62.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks62.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks63.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks63.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks64.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks64.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks65.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks65.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks66.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks66.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks67.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks67.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks68.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks68.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks69.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks69.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks6.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks6.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks70.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks70.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks71.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks71.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks72.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks72.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks73.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks73.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks74.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks74.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks75.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks75.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks76.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks76.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks77.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks77.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks78.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks78.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks79.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks79.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks7.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks7.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks80.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks80.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks81.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks81.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks82.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks82.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks83.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks83.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks84.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks84.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks85.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks85.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks86.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks86.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks87.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks87.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks88.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks88.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks89.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks89.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks8.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks8.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks90.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks90.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks91.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks91.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks92.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks92.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks93.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks93.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks94.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks94.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks95.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks95.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks96.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks96.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks97.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks97.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks98.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks98.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks99.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks99.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks9.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.6frame.chunks9.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks100.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks100.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks100.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks101.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks101.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks101.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks102.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks102.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks102.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks103.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks103.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks103.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks104.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks104.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks104.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks105.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks105.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks105.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks106.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks106.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks106.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks107.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks107.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks107.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks108.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks108.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks108.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks109.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks109.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks109.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks10.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks10.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks10.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks110.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks110.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks110.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks111.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks111.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks111.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks112.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks112.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks112.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks113.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks113.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks113.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks114.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks114.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks114.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks115.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks115.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks115.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks116.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks116.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks116.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks117.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks117.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks117.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks118.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks118.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks118.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks119.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks119.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks119.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks11.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks11.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks11.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks120.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks120.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks120.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks121.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks121.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks121.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks122.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks122.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks122.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks123.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks123.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks123.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks124.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks124.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks124.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks125.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks125.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks125.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks126.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks126.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks126.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks127.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks127.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks127.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks128.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks128.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks128.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks129.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks129.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks129.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks12.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks12.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks12.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks130.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks130.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks130.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks131.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks131.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks131.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks132.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks132.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks132.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks133.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks133.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks133.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks134.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks134.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks134.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks135.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks135.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks135.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks136.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks136.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks136.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks137.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks137.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks137.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks138.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks138.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks138.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks139.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks139.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks139.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks13.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks13.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks13.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks140.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks140.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks140.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks141.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks141.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks141.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks142.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks142.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks142.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks143.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks143.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks143.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks144.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks144.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks144.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks145.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks145.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks145.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks146.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks146.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks146.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks147.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks147.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks147.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks148.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks148.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks148.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks149.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks149.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks149.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks14.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks14.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks14.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks150.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks150.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks150.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks151.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks151.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks151.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks152.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks152.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks152.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks153.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks153.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks153.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks154.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks154.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks154.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks155.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks155.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks155.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks156.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks156.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks156.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks157.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks157.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks157.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks158.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks158.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks158.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks159.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks159.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks159.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks15.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks15.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks15.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks160.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks160.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks160.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks161.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks161.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks161.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks162.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks162.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks162.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks163.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks163.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks163.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks164.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks164.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks164.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks165.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks165.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks165.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks166.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks166.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks166.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks167.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks167.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks167.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks168.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks168.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks168.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks169.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks169.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks169.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks16.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks16.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks16.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks170.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks170.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks170.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks171.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks171.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks171.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks172.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks172.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks172.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks173.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks173.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks173.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks174.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks174.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks174.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks175.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks175.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks175.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks176.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks176.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks176.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks177.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks177.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks177.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks178.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks178.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks178.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks179.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks179.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks179.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks17.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks17.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks17.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks180.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks180.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks180.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks181.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks181.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks181.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks182.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks182.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks182.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks183.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks183.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks183.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks184.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks184.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks184.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks185.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks185.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks185.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks186.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks186.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks186.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks187.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks187.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks187.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks188.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks188.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks188.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks189.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks189.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks189.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks18.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks18.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks18.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks190.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks190.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks190.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks191.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks191.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks191.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks192.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks192.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks192.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks193.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks193.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks193.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks194.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks194.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks194.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks195.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks195.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks195.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks196.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks196.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks196.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks197.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks197.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks197.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks198.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks198.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks198.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks199.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks199.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks199.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks19.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks19.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks19.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks1.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks1.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks1.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks200.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks200.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks200.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks201.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks201.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks201.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks202.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks202.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks202.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks203.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks203.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks203.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks204.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks204.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks204.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks205.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks205.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks205.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks206.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks206.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks206.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks207.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks207.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks207.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks208.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks208.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks208.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks209.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks209.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks209.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks20.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks20.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks20.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks210.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks210.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks210.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks211.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks211.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks211.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks212.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks212.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks212.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks213.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks213.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks213.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks214.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks214.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks214.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks215.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks215.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks215.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks216.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks216.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks216.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks217.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks217.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks217.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks218.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks218.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks218.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks219.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks219.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks219.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks21.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks21.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks21.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks220.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks220.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks220.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks221.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks221.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks221.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks222.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks222.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks222.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks223.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks223.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks223.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks224.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks224.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks224.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks225.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks225.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks225.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks226.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks226.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks226.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks227.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks227.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks227.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks228.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks228.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks228.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks229.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks229.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks229.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks22.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks22.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks22.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks230.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks230.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks230.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks231.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks231.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks231.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks232.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks232.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks232.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks233.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks233.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks233.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks234.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks234.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks234.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks235.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks235.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks235.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks236.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks236.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks236.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks237.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks237.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks237.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks238.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks238.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks238.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks239.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks239.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks239.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks23.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks23.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks23.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks240.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks240.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks240.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks241.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks241.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks241.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks242.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks242.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks242.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks243.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks243.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks243.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks244.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks244.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks244.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks245.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks245.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks245.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks246.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks246.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks246.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks247.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks247.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks247.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks248.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks248.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks248.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks249.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks249.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks249.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks24.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks24.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks24.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks250.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks250.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks250.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks251.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks251.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks251.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks252.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks252.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks252.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks253.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks253.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks253.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks254.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks254.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks254.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks255.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks255.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks255.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks256.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks256.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks256.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks257.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks257.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks257.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks258.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks258.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks258.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks259.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks259.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks259.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks25.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks25.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks25.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks260.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks260.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks260.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks261.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks261.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks261.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks262.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks262.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks262.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks263.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks263.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks263.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks264.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks264.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks264.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks265.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks265.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks265.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks266.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks266.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks266.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks267.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks267.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks267.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks268.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks268.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks268.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks269.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks269.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks269.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks26.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks26.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks26.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks270.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks270.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks270.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks271.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks271.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks271.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks272.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks272.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks272.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks273.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks273.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks273.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks274.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks274.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks274.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks275.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks275.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks275.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks276.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks276.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks276.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks277.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks277.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks277.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks278.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks278.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks278.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks279.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks279.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks279.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks27.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks27.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks27.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks280.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks280.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks280.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks281.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks281.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks281.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks282.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks282.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks282.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks283.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks283.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks283.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks284.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks284.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks284.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks285.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks285.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks285.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks286.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks286.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks286.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks287.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks287.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks287.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks288.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks288.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks288.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks289.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks289.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks289.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks28.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks28.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks28.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks290.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks290.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks290.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks291.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks291.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks291.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks292.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks292.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks292.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks293.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks293.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks293.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks294.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks294.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks294.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks295.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks295.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks295.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks296.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks296.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks296.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks297.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks297.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks297.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks298.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks298.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks298.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks299.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks299.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks299.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks29.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks29.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks29.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks2.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks2.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks2.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks300.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks300.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks300.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks301.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks301.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks301.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks302.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks302.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks302.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks303.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks303.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks303.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks304.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks304.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks304.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks305.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks305.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks305.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks306.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks306.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks306.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks307.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks307.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks307.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks308.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks308.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks308.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks309.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks309.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks309.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks30.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks30.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks30.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks310.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks310.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks310.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks311.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks311.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks311.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks312.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks312.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks312.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks313.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks313.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks313.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks314.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks314.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks314.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks315.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks315.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks315.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks316.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks316.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks316.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks317.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks317.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks317.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks318.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks318.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks318.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks319.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks319.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks319.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks31.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks31.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks31.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks320.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks320.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks320.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks321.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks321.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks321.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks322.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks322.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks322.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks323.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks323.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks323.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks324.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks324.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks324.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks325.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks325.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks325.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks326.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks326.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks326.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks327.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks327.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks327.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks328.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks328.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks328.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks329.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks329.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks329.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks32.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks32.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks32.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks330.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks330.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks330.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks331.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks331.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks331.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks33.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks33.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks33.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks34.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks34.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks34.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks35.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks35.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks35.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks36.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks36.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks36.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks37.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks37.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks37.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks38.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks38.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks38.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks39.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks39.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks39.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks3.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks3.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks3.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks40.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks40.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks40.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks41.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks41.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks41.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks42.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks42.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks42.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks43.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks43.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks43.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks44.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks44.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks44.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks45.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks45.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks45.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks46.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks46.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks46.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks47.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks47.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks47.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks48.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks48.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks48.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks49.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks49.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks49.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks4.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks4.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks4.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks50.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks50.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks50.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks51.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks51.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks51.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks52.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks52.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks52.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks53.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks53.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks53.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks54.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks54.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks54.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks55.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks55.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks55.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks56.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks56.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks56.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks57.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks57.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks57.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks58.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks58.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks58.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks59.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks59.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks59.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks5.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks5.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks5.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks60.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks60.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks60.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks61.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks61.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks61.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks62.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks62.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks62.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks63.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks63.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks63.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks64.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks64.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks64.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks65.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks65.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks65.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks66.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks66.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks66.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks67.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks67.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks67.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks68.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks68.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks68.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks69.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks69.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks69.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks6.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks6.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks6.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks70.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks70.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks70.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks71.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks71.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks71.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks72.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks72.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks72.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks73.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks73.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks73.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks74.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks74.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks74.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks75.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks75.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks75.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks76.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks76.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks76.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks77.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks77.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks77.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks78.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks78.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks78.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks79.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks79.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks79.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks7.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks7.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks7.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks80.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks80.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks80.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks81.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks81.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks81.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks82.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks82.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks82.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks83.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks83.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks83.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks84.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks84.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks84.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks85.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks85.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks85.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks86.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks86.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks86.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks87.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks87.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks87.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks88.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks88.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks88.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks89.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks89.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks89.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks8.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks8.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks8.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks90.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks90.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks90.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks91.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks91.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks91.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks92.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks92.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks92.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks93.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks93.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks93.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks94.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks94.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks94.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks95.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks95.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks95.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks96.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks96.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks96.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks97.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks97.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks97.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks98.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks98.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks98.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks99.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks99.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks99.fa
/oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan --cpu 20 -o SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks9.PFam32-A --tblout SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks9.PFam32-A.tblout /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm SPAdes-3.13-RNA-SSE01_FRAS202340102-1r/transcripts.min60aa_standardCode_ORF.chunks9.fa