Index of /kundaje/marinovg/oak/Symbiodinium/2020-02-13-Novogene-NovaSeq/juicer-L1410-Dictyostelium_discoideum_Hi-C-MboI_MseI-3D_DNA-rounds10

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]Dictyostelium_discoideum.dictybase.01.20.0.asm2020-07-04 06:19 127  
[ ]Dictyostelium_discoideum.dictybase.01.20.0.assembly2020-07-04 06:20 817  
[ ]Dictyostelium_discoideum.dictybase.01.20.0.cprops2020-07-04 06:17 651  
[ ]Dictyostelium_discoideum.dictybase.01.20.0.hic2020-07-04 06:22 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.0_asm.scaffold_track.txt2020-07-04 06:20 4.3K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.0_asm.superscaf_track.txt2020-07-04 06:20 433  
[ ]Dictyostelium_discoideum.dictybase.01.20.1.asm2020-07-04 06:25 402  
[ ]Dictyostelium_discoideum.dictybase.01.20.1.assembly2020-07-04 06:26 4.2K 
[ ]Dictyostelium_discoideum.dictybase.01.20.1.cprops2020-07-04 06:22 3.7K 
[ ]Dictyostelium_discoideum.dictybase.01.20.1.hic2020-07-04 06:29 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.1_asm.scaffold_track.txt2020-07-04 06:26 14K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.1_asm.superscaf_track.txt2020-07-04 06:26 8.2K 
[ ]Dictyostelium_discoideum.dictybase.01.20.2.asm2020-07-04 06:33 495  
[ ]Dictyostelium_discoideum.dictybase.01.20.2.assembly2020-07-04 06:34 5.1K 
[ ]Dictyostelium_discoideum.dictybase.01.20.2.cprops2020-07-04 06:29 4.5K 
[ ]Dictyostelium_discoideum.dictybase.01.20.2.hic2020-07-04 06:36 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.2_asm.scaffold_track.txt2020-07-04 06:34 17K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.2_asm.superscaf_track.txt2020-07-04 06:34 9.7K 
[ ]Dictyostelium_discoideum.dictybase.01.20.3.asm2020-07-04 06:40 563  
[ ]Dictyostelium_discoideum.dictybase.01.20.3.assembly2020-07-04 06:41 5.8K 
[ ]Dictyostelium_discoideum.dictybase.01.20.3.cprops2020-07-04 06:37 5.1K 
[ ]Dictyostelium_discoideum.dictybase.01.20.3.hic2020-07-04 06:44 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.3_asm.scaffold_track.txt2020-07-04 06:41 19K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.3_asm.superscaf_track.txt2020-07-04 06:41 12K 
[ ]Dictyostelium_discoideum.dictybase.01.20.4.asm2020-07-04 06:48 605  
[ ]Dictyostelium_discoideum.dictybase.01.20.4.assembly2020-07-04 06:49 6.3K 
[ ]Dictyostelium_discoideum.dictybase.01.20.4.cprops2020-07-04 06:44 5.5K 
[ ]Dictyostelium_discoideum.dictybase.01.20.4.hic2020-07-04 06:51 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.4_asm.scaffold_track.txt2020-07-04 06:49 21K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.4_asm.superscaf_track.txt2020-07-04 06:49 13K 
[ ]Dictyostelium_discoideum.dictybase.01.20.5.asm2020-07-04 06:55 626  
[ ]Dictyostelium_discoideum.dictybase.01.20.5.assembly2020-07-04 06:55 6.6K 
[ ]Dictyostelium_discoideum.dictybase.01.20.5.cprops2020-07-04 06:51 5.8K 
[ ]Dictyostelium_discoideum.dictybase.01.20.5.hic2020-07-04 06:57 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.5_asm.scaffold_track.txt2020-07-04 06:55 22K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.5_asm.superscaf_track.txt2020-07-04 06:55 14K 
[ ]Dictyostelium_discoideum.dictybase.01.20.6.asm2020-07-04 07:02 676  
[ ]Dictyostelium_discoideum.dictybase.01.20.6.assembly2020-07-04 07:03 7.1K 
[ ]Dictyostelium_discoideum.dictybase.01.20.6.cprops2020-07-04 06:58 6.2K 
[ ]Dictyostelium_discoideum.dictybase.01.20.6.hic2020-07-04 07:05 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.6_asm.scaffold_track.txt2020-07-04 07:03 23K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.6_asm.superscaf_track.txt2020-07-04 07:03 16K 
[ ]Dictyostelium_discoideum.dictybase.01.20.7.asm2020-07-04 07:10 681  
[ ]Dictyostelium_discoideum.dictybase.01.20.7.assembly2020-07-04 07:11 7.1K 
[ ]Dictyostelium_discoideum.dictybase.01.20.7.cprops2020-07-04 07:06 6.3K 
[ ]Dictyostelium_discoideum.dictybase.01.20.7.hic2020-07-04 07:13 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.7_asm.scaffold_track.txt2020-07-04 07:11 23K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.7_asm.superscaf_track.txt2020-07-04 07:11 16K 
[ ]Dictyostelium_discoideum.dictybase.01.20.FINAL.assembly2020-07-04 07:42 4.7K 
[ ]Dictyostelium_discoideum.dictybase.01.20.FINAL.fasta2020-07-04 07:42 35M 
[ ]Dictyostelium_discoideum.dictybase.01.20.FINAL.hic2020-07-04 07:46 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.FINAL_asm.scaffold_track.txt2020-07-04 07:44 14K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.FINAL_asm.superscaf_track.txt2020-07-04 07:44 15K 
[ ]Dictyostelium_discoideum.dictybase.01.20.cprops2020-07-04 06:17 651  
[TXT]Dictyostelium_discoideum.dictybase.01.20.edits.txt2020-07-04 07:06 12K 
[ ]Dictyostelium_discoideum.dictybase.01.20.final.asm2020-07-04 07:38 593  
[ ]Dictyostelium_discoideum.dictybase.01.20.final.assembly2020-07-04 07:40 3.9K 
[ ]Dictyostelium_discoideum.dictybase.01.20.final.cprops2020-07-04 07:38 3.2K 
[ ]Dictyostelium_discoideum.dictybase.01.20.final.fasta2020-07-04 07:42 33M 
[ ]Dictyostelium_discoideum.dictybase.01.20.final.hic2020-07-04 07:42 20M 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.asm2020-07-04 07:29 1.4K 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.cprops2020-07-04 07:14 6.3K 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.depletion_score_narrow.wig2020-07-04 07:14 446K 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.depletion_score_wide.wig2020-07-04 07:13 4.6K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished.edits_2D.txt2020-07-04 07:14 47  
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.hic2020-07-04 07:32 22M 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.mismatch_narrow.bed2020-07-04 07:14 52  
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.mismatch_wide.bed2020-07-04 07:13 53  
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished.mismatches_2D.txt2020-07-04 07:14 47  
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.split.assembly2020-07-04 07:36 7.9K 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.split.depletion_score_narrow.wig2020-07-04 07:33 457K 
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.split.depletion_score_wide.wig2020-07-04 07:32 4.7K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished.split.edits_2D.txt2020-07-04 07:33 47  
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.split.mismatch_narrow.bed2020-07-04 07:33 54  
[ ]Dictyostelium_discoideum.dictybase.01.20.polished.split.mismatch_wide.bed2020-07-04 07:32 54  
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished.split.mismatches_2D.txt2020-07-04 07:33 47  
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished.split.suspicious_2D.txt2020-07-04 07:33 47  
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished.suspect_2D.txt2020-07-04 07:14 47  
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished_asm.scaffold_track.txt2020-07-04 07:30 24K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.polished_asm.superscaf_track.txt2020-07-04 07:30 17K 
[ ]Dictyostelium_discoideum.dictybase.01.20.rawchrom.asm2020-07-04 07:38 593  
[ ]Dictyostelium_discoideum.dictybase.01.20.rawchrom.assembly2020-07-04 07:40 3.9K 
[ ]Dictyostelium_discoideum.dictybase.01.20.rawchrom.cprops2020-07-04 07:38 3.2K 
[ ]Dictyostelium_discoideum.dictybase.01.20.rawchrom.fasta2020-07-04 07:42 33M 
[ ]Dictyostelium_discoideum.dictybase.01.20.rawchrom.hic2020-07-04 07:42 20M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.rawchrom_asm.scaffold_track.txt2020-07-04 07:40 13K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.rawchrom_asm.superscaf_track.txt2020-07-04 07:40 15K 
[ ]Dictyostelium_discoideum.dictybase.01.20.resolved.asm2020-07-04 07:10 681  
[ ]Dictyostelium_discoideum.dictybase.01.20.resolved.cprops2020-07-04 07:06 6.3K 
[ ]Dictyostelium_discoideum.dictybase.01.20.resolved.hic2020-07-04 07:13 20M 
[ ]Dictyostelium_discoideum.dictybase.01.20.resolved.polish.assembly2020-07-04 07:30 7.9K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.resolved_asm.scaffold_track.txt2020-07-04 07:11 23K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.resolved_asm.superscaf_track.txt2020-07-04 07:11 16K 
[ ]Dictyostelium_discoideum.dictybase.01.20.split.asm2020-07-04 07:35 1.4K 
[ ]Dictyostelium_discoideum.dictybase.01.20.split.assembly2020-07-04 07:38 7.9K 
[ ]Dictyostelium_discoideum.dictybase.01.20.split.cprops2020-07-04 07:33 6.3K 
[ ]Dictyostelium_discoideum.dictybase.01.20.split.hic2020-07-04 07:38 22M 
[TXT]Dictyostelium_discoideum.dictybase.01.20.split_asm.scaffold_track.txt2020-07-04 07:36 24K 
[TXT]Dictyostelium_discoideum.dictybase.01.20.split_asm.superscaf_track.txt2020-07-04 07:36 35K 
[ ]LICENSE2020-07-04 06:15 1.0K 
[TXT]README.md2020-07-04 06:15 8.7K 
[TXT]archive.Dictyostelium_discoideum.dictybase.01.20.edits.at.step.1.txt2020-07-04 06:29 5.7K 
[TXT]archive.Dictyostelium_discoideum.dictybase.01.20.edits.at.step.2.txt2020-07-04 06:37 7.1K 
[TXT]archive.Dictyostelium_discoideum.dictybase.01.20.edits.at.step.3.txt2020-07-04 06:44 8.4K 
[TXT]archive.Dictyostelium_discoideum.dictybase.01.20.edits.at.step.4.txt2020-07-04 06:51 9.5K 
[TXT]archive.Dictyostelium_discoideum.dictybase.01.20.edits.at.step.5.txt2020-07-04 06:58 10K 
[TXT]archive.Dictyostelium_discoideum.dictybase.01.20.edits.at.step.6.txt2020-07-04 07:06 11K 
[ ]coverage_wide.at.step.0.wig2020-07-04 06:22 24K 
[ ]coverage_wide.at.step.1.wig2020-07-04 06:29 24K 
[ ]coverage_wide.at.step.2.wig2020-07-04 06:37 24K 
[ ]coverage_wide.at.step.3.wig2020-07-04 06:44 24K 
[ ]coverage_wide.at.step.4.wig2020-07-04 06:51 24K 
[ ]coverage_wide.at.step.5.wig2020-07-04 06:58 24K 
[ ]coverage_wide.at.step.6.wig2020-07-04 07:06 24K 
[ ]coverage_wide.at.step.7.wig2020-07-04 07:13 24K 
[ ]depletion_score_narrow.at.step.0.wig2020-07-04 06:22 417K 
[ ]depletion_score_narrow.at.step.1.wig2020-07-04 06:29 417K 
[ ]depletion_score_narrow.at.step.2.wig2020-07-04 06:37 417K 
[ ]depletion_score_narrow.at.step.3.wig2020-07-04 06:44 417K 
[ ]depletion_score_narrow.at.step.4.wig2020-07-04 06:51 417K 
[ ]depletion_score_narrow.at.step.5.wig2020-07-04 06:58 417K 
[ ]depletion_score_narrow.at.step.6.wig2020-07-04 07:06 417K 
[ ]depletion_score_narrow.at.step.7.wig2020-07-04 07:13 417K 
[ ]depletion_score_wide.at.step.0.wig2020-07-04 06:22 22K 
[ ]depletion_score_wide.at.step.1.wig2020-07-04 06:29 22K 
[ ]depletion_score_wide.at.step.2.wig2020-07-04 06:36 22K 
[ ]depletion_score_wide.at.step.3.wig2020-07-04 06:44 22K 
[ ]depletion_score_wide.at.step.4.wig2020-07-04 06:51 19K 
[ ]depletion_score_wide.at.step.5.wig2020-07-04 06:57 22K 
[ ]depletion_score_wide.at.step.6.wig2020-07-04 07:05 22K 
[ ]depletion_score_wide.at.step.7.wig2020-07-04 07:13 22K 
[TXT]edits.for.step.1.txt2020-07-04 06:22 7.8K 
[TXT]edits.for.step.2.txt2020-07-04 06:29 1.8K 
[TXT]edits.for.step.3.txt2020-07-04 06:37 1.5K 
[TXT]edits.for.step.4.txt2020-07-04 06:44 1.2K 
[TXT]edits.for.step.5.txt2020-07-04 06:51 957  
[TXT]edits.for.step.6.txt2020-07-04 06:58 1.3K 
[TXT]edits.for.step.7.txt2020-07-04 07:06 138  
[TXT]h.edits.txt2020-07-04 07:33 47  
[ ]mismatch_narrow.at.step.0.bed2020-07-04 06:22 185  
[ ]mismatch_narrow.at.step.1.bed2020-07-04 06:29 594  
[ ]mismatch_narrow.at.step.2.bed2020-07-04 06:37 461  
[ ]mismatch_narrow.at.step.3.bed2020-07-04 06:44 365  
[ ]mismatch_narrow.at.step.4.bed2020-07-04 06:51 392  
[ ]mismatch_narrow.at.step.5.bed2020-07-04 06:58 369  
[ ]mismatch_narrow.at.step.6.bed2020-07-04 07:06 256  
[ ]mismatch_narrow.at.step.7.bed2020-07-04 07:13 256  
[ ]mismatch_wide.at.step.0.bed2020-07-04 06:22 158  
[ ]mismatch_wide.at.step.1.bed2020-07-04 06:29 259  
[ ]mismatch_wide.at.step.2.bed2020-07-04 06:36 209  
[ ]mismatch_wide.at.step.3.bed2020-07-04 06:44 204  
[ ]mismatch_wide.at.step.4.bed2020-07-04 06:51 208  
[ ]mismatch_wide.at.step.5.bed2020-07-04 06:57 208  
[ ]mismatch_wide.at.step.6.bed2020-07-04 07:05 208  
[ ]mismatch_wide.at.step.7.bed2020-07-04 07:13 208  
[TXT]mismatches.at.step.0.txt2020-07-04 06:22 47  
[TXT]mismatches.at.step.1.txt2020-07-04 06:29 1.0K 
[TXT]mismatches.at.step.2.txt2020-07-04 06:37 866  
[TXT]mismatches.at.step.3.txt2020-07-04 06:44 866  
[TXT]mismatches.at.step.4.txt2020-07-04 06:51 1.1K 
[TXT]mismatches.at.step.5.txt2020-07-04 06:58 502  
[TXT]mismatches.at.step.6.txt2020-07-04 07:06 229  
[TXT]mismatches.at.step.7.txt2020-07-04 07:13 320  
[ ]repeats_wide.at.step.0.bed2020-07-04 06:22 1.1K 
[ ]repeats_wide.at.step.1.bed2020-07-04 06:29 374  
[ ]repeats_wide.at.step.2.bed2020-07-04 06:37 703  
[ ]repeats_wide.at.step.3.bed2020-07-04 06:44 483  
[ ]repeats_wide.at.step.4.bed2020-07-04 06:51 839  
[ ]repeats_wide.at.step.5.bed2020-07-04 06:58 626  
[ ]repeats_wide.at.step.6.bed2020-07-04 07:06 678  
[ ]repeats_wide.at.step.7.bed2020-07-04 07:13 753  
[TXT]run-asm-pipeline-post-review.sh2020-07-04 06:15 11K 
[TXT]run-asm-pipeline.sh2020-07-04 06:15 44K 
[ ]suspect.at.step.0.bed2020-07-04 06:22 1.1K 
[ ]suspect.at.step.1.bed2020-07-04 06:29 704  
[ ]suspect.at.step.2.bed2020-07-04 06:37 958  
[ ]suspect.at.step.3.bed2020-07-04 06:44 596  
[ ]suspect.at.step.4.bed2020-07-04 06:51 1.0K 
[ ]suspect.at.step.5.bed2020-07-04 06:58 789  
[ ]suspect.at.step.6.bed2020-07-04 07:06 776  
[ ]suspect.at.step.7.bed2020-07-04 07:13 851  
[TXT]suspect_2D.at.step.0.txt2020-07-04 06:22 7.8K 
[TXT]suspect_2D.at.step.1.txt2020-07-04 06:29 2.8K 
[TXT]suspect_2D.at.step.2.txt2020-07-04 06:37 2.3K 
[TXT]suspect_2D.at.step.3.txt2020-07-04 06:44 2.0K 
[TXT]suspect_2D.at.step.4.txt2020-07-04 06:51 2.0K 
[TXT]suspect_2D.at.step.5.txt2020-07-04 06:58 1.7K 
[TXT]suspect_2D.at.step.6.txt2020-07-04 07:06 320  
[TXT]suspect_2D.at.step.7.txt2020-07-04 07:13 320  
[ ]z2020-07-04 06:15 368  
[ ]zL1410-3D10.1.err2020-07-04 07:43 2.2K 
[ ]zL1410-3D10.1.out2020-07-04 07:46 38K 
[ ]zL1410-3D10.1.sbatch2020-07-04 06:17 577  
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