Index of /kundaje/marinovg/oak/Symbiodinium/2020-01-23-Novogene-NovaSeq/juicer-L1194-Gonium_pectorale_Hi-C-3D_DNA-r20

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]LICENSE2020-03-08 13:02 1.0K 
[TXT]README.md2020-03-08 13:02 8.7K 
[TXT]archive.scaffolds.edits.at.step.1.txt2020-03-08 17:45 1.4M 
[TXT]archive.scaffolds.edits.at.step.2.txt2020-03-08 18:37 2.1M 
[TXT]archive.scaffolds.edits.at.step.3.txt2020-03-08 19:28 2.0M 
[TXT]archive.scaffolds.edits.at.step.4.txt2020-03-08 20:17 2.6M 
[TXT]archive.scaffolds.edits.at.step.5.txt2020-03-08 21:00 2.9M 
[TXT]archive.scaffolds.edits.at.step.6.txt2020-03-08 21:44 3.2M 
[TXT]archive.scaffolds.edits.at.step.7.txt2020-03-08 22:32 3.4M 
[TXT]archive.scaffolds.edits.at.step.8.txt2020-03-08 23:16 3.5M 
[TXT]archive.scaffolds.edits.at.step.9.txt2020-03-08 23:55 3.6M 
[TXT]archive.scaffolds.edits.at.step.10.txt2020-03-09 00:37 3.7M 
[TXT]archive.scaffolds.edits.at.step.11.txt2020-03-09 01:13 3.8M 
[TXT]archive.scaffolds.edits.at.step.12.txt2020-03-09 01:47 3.9M 
[TXT]archive.scaffolds.edits.at.step.13.txt2020-03-09 02:21 3.9M 
[TXT]archive.scaffolds.edits.at.step.14.txt2020-03-09 02:54 4.0M 
[TXT]archive.scaffolds.edits.at.step.15.txt2020-03-09 03:25 4.0M 
[TXT]archive.scaffolds.edits.at.step.16.txt2020-03-09 03:56 4.0M 
[TXT]archive.scaffolds.edits.at.step.17.txt2020-03-09 04:28 4.0M 
[TXT]archive.scaffolds.edits.at.step.18.txt2020-03-09 05:00 4.1M 
[ ]coverage_wide.at.step.0.wig2020-03-08 16:47 235K 
[ ]coverage_wide.at.step.1.wig2020-03-08 17:45 235K 
[ ]coverage_wide.at.step.2.wig2020-03-08 18:37 235K 
[ ]coverage_wide.at.step.3.wig2020-03-08 19:28 235K 
[ ]coverage_wide.at.step.4.wig2020-03-08 20:17 234K 
[ ]coverage_wide.at.step.5.wig2020-03-08 21:00 234K 
[ ]coverage_wide.at.step.6.wig2020-03-08 21:44 234K 
[ ]coverage_wide.at.step.7.wig2020-03-08 22:32 234K 
[ ]coverage_wide.at.step.8.wig2020-03-08 23:15 234K 
[ ]coverage_wide.at.step.9.wig2020-03-08 23:55 234K 
[ ]coverage_wide.at.step.10.wig2020-03-09 00:37 235K 
[ ]coverage_wide.at.step.11.wig2020-03-09 01:13 234K 
[ ]coverage_wide.at.step.12.wig2020-03-09 01:47 234K 
[ ]coverage_wide.at.step.13.wig2020-03-09 02:21 234K 
[ ]coverage_wide.at.step.14.wig2020-03-09 02:54 235K 
[ ]coverage_wide.at.step.15.wig2020-03-09 03:25 234K 
[ ]coverage_wide.at.step.16.wig2020-03-09 03:56 234K 
[ ]coverage_wide.at.step.17.wig2020-03-09 04:28 234K 
[ ]coverage_wide.at.step.18.wig2020-03-09 05:00 235K 
[ ]coverage_wide.at.step.19.wig2020-03-09 05:33 234K 
[DIR]data/2020-03-08 13:02 -  
[ ]depletion_score_narrow.at.step.0.wig2020-03-08 16:47 3.6M 
[ ]depletion_score_narrow.at.step.1.wig2020-03-08 17:45 3.6M 
[ ]depletion_score_narrow.at.step.2.wig2020-03-08 18:37 3.6M 
[ ]depletion_score_narrow.at.step.3.wig2020-03-08 19:28 3.6M 
[ ]depletion_score_narrow.at.step.4.wig2020-03-08 20:17 3.6M 
[ ]depletion_score_narrow.at.step.5.wig2020-03-08 21:00 3.6M 
[ ]depletion_score_narrow.at.step.6.wig2020-03-08 21:44 3.6M 
[ ]depletion_score_narrow.at.step.7.wig2020-03-08 22:31 3.6M 
[ ]depletion_score_narrow.at.step.8.wig2020-03-08 23:15 3.6M 
[ ]depletion_score_narrow.at.step.9.wig2020-03-08 23:55 3.6M 
[ ]depletion_score_narrow.at.step.10.wig2020-03-09 00:37 3.6M 
[ ]depletion_score_narrow.at.step.11.wig2020-03-09 01:13 3.6M 
[ ]depletion_score_narrow.at.step.12.wig2020-03-09 01:47 3.6M 
[ ]depletion_score_narrow.at.step.13.wig2020-03-09 02:21 3.6M 
[ ]depletion_score_narrow.at.step.14.wig2020-03-09 02:54 3.6M 
[ ]depletion_score_narrow.at.step.15.wig2020-03-09 03:25 3.6M 
[ ]depletion_score_narrow.at.step.16.wig2020-03-09 03:56 3.6M 
[ ]depletion_score_narrow.at.step.17.wig2020-03-09 04:28 3.6M 
[ ]depletion_score_narrow.at.step.18.wig2020-03-09 05:00 3.6M 
[ ]depletion_score_narrow.at.step.19.wig2020-03-09 05:33 3.6M 
[ ]depletion_score_wide.at.step.0.wig2020-03-08 16:46 196K 
[ ]depletion_score_wide.at.step.1.wig2020-03-08 17:45 192K 
[ ]depletion_score_wide.at.step.2.wig2020-03-08 18:36 189K 
[ ]depletion_score_wide.at.step.3.wig2020-03-08 19:27 189K 
[ ]depletion_score_wide.at.step.4.wig2020-03-08 20:16 188K 
[ ]depletion_score_wide.at.step.5.wig2020-03-08 20:59 186K 
[ ]depletion_score_wide.at.step.6.wig2020-03-08 21:43 185K 
[ ]depletion_score_wide.at.step.7.wig2020-03-08 22:31 185K 
[ ]depletion_score_wide.at.step.8.wig2020-03-08 23:15 184K 
[ ]depletion_score_wide.at.step.9.wig2020-03-08 23:54 184K 
[ ]depletion_score_wide.at.step.10.wig2020-03-09 00:36 180K 
[ ]depletion_score_wide.at.step.11.wig2020-03-09 01:12 183K 
[ ]depletion_score_wide.at.step.12.wig2020-03-09 01:46 183K 
[ ]depletion_score_wide.at.step.13.wig2020-03-09 02:20 183K 
[ ]depletion_score_wide.at.step.14.wig2020-03-09 02:53 181K 
[ ]depletion_score_wide.at.step.15.wig2020-03-09 03:24 183K 
[ ]depletion_score_wide.at.step.16.wig2020-03-09 03:55 183K 
[ ]depletion_score_wide.at.step.17.wig2020-03-09 04:28 182K 
[ ]depletion_score_wide.at.step.18.wig2020-03-09 04:59 182K 
[ ]depletion_score_wide.at.step.19.wig2020-03-09 05:32 182K 
[DIR]edit/2020-03-08 13:02 -  
[TXT]edits.for.step.1.txt2020-03-08 16:47 1.2M 
[TXT]edits.for.step.2.txt2020-03-08 17:45 610K 
[TXT]edits.for.step.3.txt2020-03-08 18:37 12K 
[TXT]edits.for.step.4.txt2020-03-08 19:28 436K 
[TXT]edits.for.step.5.txt2020-03-08 20:17 310K 
[TXT]edits.for.step.6.txt2020-03-08 21:00 193K 
[TXT]edits.for.step.7.txt2020-03-08 21:44 162K 
[TXT]edits.for.step.8.txt2020-03-08 22:32 125K 
[TXT]edits.for.step.9.txt2020-03-08 23:16 87K 
[TXT]edits.for.step.10.txt2020-03-08 23:55 70K 
[TXT]edits.for.step.11.txt2020-03-09 00:37 63K 
[TXT]edits.for.step.12.txt2020-03-09 01:13 56K 
[TXT]edits.for.step.13.txt2020-03-09 01:47 42K 
[TXT]edits.for.step.14.txt2020-03-09 02:21 35K 
[TXT]edits.for.step.15.txt2020-03-09 02:54 30K 
[TXT]edits.for.step.16.txt2020-03-09 03:25 1.3K 
[TXT]edits.for.step.17.txt2020-03-09 03:56 30K 
[TXT]edits.for.step.18.txt2020-03-09 04:28 26K 
[TXT]edits.for.step.19.txt2020-03-09 05:00 9.6K 
[DIR]finalize/2020-03-08 13:02 -  
[TXT]h.edits.txt2020-03-10 04:07 47  
[DIR]lift/2020-03-08 13:02 -  
[DIR]merge/2020-03-08 13:02 -  
[ ]mismatch_narrow.at.step.0.bed2020-03-08 16:47 182K 
[ ]mismatch_narrow.at.step.1.bed2020-03-08 17:45 202K 
[ ]mismatch_narrow.at.step.2.bed2020-03-08 18:37 197K 
[ ]mismatch_narrow.at.step.3.bed2020-03-08 19:28 199K 
[ ]mismatch_narrow.at.step.4.bed2020-03-08 20:17 198K 
[ ]mismatch_narrow.at.step.5.bed2020-03-08 21:00 199K 
[ ]mismatch_narrow.at.step.6.bed2020-03-08 21:44 201K 
[ ]mismatch_narrow.at.step.7.bed2020-03-08 22:32 202K 
[ ]mismatch_narrow.at.step.8.bed2020-03-08 23:15 207K 
[ ]mismatch_narrow.at.step.9.bed2020-03-08 23:55 208K 
[ ]mismatch_narrow.at.step.10.bed2020-03-09 00:37 209K 
[ ]mismatch_narrow.at.step.11.bed2020-03-09 01:13 211K 
[ ]mismatch_narrow.at.step.12.bed2020-03-09 01:47 210K 
[ ]mismatch_narrow.at.step.13.bed2020-03-09 02:21 212K 
[ ]mismatch_narrow.at.step.14.bed2020-03-09 02:54 212K 
[ ]mismatch_narrow.at.step.15.bed2020-03-09 03:25 214K 
[ ]mismatch_narrow.at.step.16.bed2020-03-09 03:56 214K 
[ ]mismatch_narrow.at.step.17.bed2020-03-09 04:28 216K 
[ ]mismatch_narrow.at.step.18.bed2020-03-09 05:00 214K 
[ ]mismatch_narrow.at.step.19.bed2020-03-09 05:33 214K 
[ ]mismatch_wide.at.step.0.bed2020-03-08 16:46 6.2K 
[ ]mismatch_wide.at.step.1.bed2020-03-08 17:45 6.3K 
[ ]mismatch_wide.at.step.2.bed2020-03-08 18:36 5.8K 
[ ]mismatch_wide.at.step.3.bed2020-03-08 19:27 5.7K 
[ ]mismatch_wide.at.step.4.bed2020-03-08 20:16 5.4K 
[ ]mismatch_wide.at.step.5.bed2020-03-08 20:59 5.4K 
[ ]mismatch_wide.at.step.6.bed2020-03-08 21:43 5.2K 
[ ]mismatch_wide.at.step.7.bed2020-03-08 22:31 5.4K 
[ ]mismatch_wide.at.step.8.bed2020-03-08 23:15 5.2K 
[ ]mismatch_wide.at.step.9.bed2020-03-08 23:54 5.2K 
[ ]mismatch_wide.at.step.10.bed2020-03-09 00:36 4.9K 
[ ]mismatch_wide.at.step.11.bed2020-03-09 01:12 5.2K 
[ ]mismatch_wide.at.step.12.bed2020-03-09 01:46 5.1K 
[ ]mismatch_wide.at.step.13.bed2020-03-09 02:20 5.2K 
[ ]mismatch_wide.at.step.14.bed2020-03-09 02:53 5.1K 
[ ]mismatch_wide.at.step.15.bed2020-03-09 03:24 5.1K 
[ ]mismatch_wide.at.step.16.bed2020-03-09 03:55 5.3K 
[ ]mismatch_wide.at.step.17.bed2020-03-09 04:28 5.1K 
[ ]mismatch_wide.at.step.18.bed2020-03-09 04:59 4.9K 
[ ]mismatch_wide.at.step.19.bed2020-03-09 05:32 5.0K 
[TXT]mismatches.at.step.0.txt2020-03-08 16:47 142K 
[TXT]mismatches.at.step.1.txt2020-03-08 17:45 169K 
[TXT]mismatches.at.step.2.txt2020-03-08 18:37 1.9K 
[TXT]mismatches.at.step.3.txt2020-03-08 19:28 146K 
[TXT]mismatches.at.step.4.txt2020-03-08 20:17 123K 
[TXT]mismatches.at.step.5.txt2020-03-08 21:00 75K 
[TXT]mismatches.at.step.6.txt2020-03-08 21:44 74K 
[TXT]mismatches.at.step.7.txt2020-03-08 22:32 62K 
[TXT]mismatches.at.step.8.txt2020-03-08 23:16 49K 
[TXT]mismatches.at.step.9.txt2020-03-08 23:55 39K 
[TXT]mismatches.at.step.10.txt2020-03-09 00:37 38K 
[TXT]mismatches.at.step.11.txt2020-03-09 01:13 31K 
[TXT]mismatches.at.step.12.txt2020-03-09 01:47 31K 
[TXT]mismatches.at.step.13.txt2020-03-09 02:21 25K 
[TXT]mismatches.at.step.14.txt2020-03-09 02:54 23K 
[TXT]mismatches.at.step.15.txt2020-03-09 03:25 684  
[TXT]mismatches.at.step.16.txt2020-03-09 03:56 25K 
[TXT]mismatches.at.step.17.txt2020-03-09 04:28 27K 
[TXT]mismatches.at.step.18.txt2020-03-09 05:00 1.6K 
[TXT]mismatches.at.step.19.txt2020-03-09 05:33 47  
[DIR]polish/2020-03-08 13:02 -  
[ ]repeats_wide.at.step.0.bed2020-03-08 16:47 3.7K 
[ ]repeats_wide.at.step.1.bed2020-03-08 17:45 14K 
[ ]repeats_wide.at.step.2.bed2020-03-08 18:37 20K 
[ ]repeats_wide.at.step.3.bed2020-03-08 19:28 21K 
[ ]repeats_wide.at.step.4.bed2020-03-08 20:17 23K 
[ ]repeats_wide.at.step.5.bed2020-03-08 21:00 26K 
[ ]repeats_wide.at.step.6.bed2020-03-08 21:44 28K 
[ ]repeats_wide.at.step.7.bed2020-03-08 22:32 28K 
[ ]repeats_wide.at.step.8.bed2020-03-08 23:15 29K 
[ ]repeats_wide.at.step.9.bed2020-03-08 23:55 29K 
[ ]repeats_wide.at.step.10.bed2020-03-09 00:37 29K 
[ ]repeats_wide.at.step.11.bed2020-03-09 01:13 29K 
[ ]repeats_wide.at.step.12.bed2020-03-09 01:47 30K 
[ ]repeats_wide.at.step.13.bed2020-03-09 02:21 30K 
[ ]repeats_wide.at.step.14.bed2020-03-09 02:54 29K 
[ ]repeats_wide.at.step.15.bed2020-03-09 03:25 29K 
[ ]repeats_wide.at.step.16.bed2020-03-09 03:56 29K 
[ ]repeats_wide.at.step.17.bed2020-03-09 04:28 30K 
[ ]repeats_wide.at.step.18.bed2020-03-09 05:00 30K 
[ ]repeats_wide.at.step.19.bed2020-03-09 05:33 30K 
[TXT]run-asm-pipeline-post-review.sh2020-03-08 13:02 11K 
[TXT]run-asm-pipeline.sh2020-03-08 13:02 44K 
[DIR]scaffold/2020-03-08 13:02 -  
[ ]scaffolds.0.asm2020-03-08 16:39 1.6M 
[ ]scaffolds.0.assembly2020-03-08 16:40 13M 
[ ]scaffolds.0.cprops2020-03-08 13:02 12M 
[ ]scaffolds.0.hic2020-03-08 16:46 67M 
[TXT]scaffolds.0_asm.scaffold_track.txt2020-03-08 16:40 37M 
[TXT]scaffolds.0_asm.superscaf_track.txt2020-03-08 16:40 26M 
[ ]scaffolds.1.asm2020-03-08 17:37 1.7M 
[ ]scaffolds.1.assembly2020-03-08 17:38 14M 
[ ]scaffolds.1.cprops2020-03-08 16:49 12M 
[ ]scaffolds.1.hic2020-03-08 17:44 78M 
[TXT]scaffolds.1_asm.scaffold_track.txt2020-03-08 17:38 39M 
[TXT]scaffolds.1_asm.superscaf_track.txt2020-03-08 17:38 27M 
[ ]scaffolds.2.asm2020-03-08 18:29 1.7M 
[ ]scaffolds.2.assembly2020-03-08 18:30 15M 
[ ]scaffolds.2.cprops2020-03-08 17:47 13M 
[ ]scaffolds.2.hic2020-03-08 18:36 79M 
[TXT]scaffolds.2_asm.scaffold_track.txt2020-03-08 18:30 41M 
[TXT]scaffolds.2_asm.superscaf_track.txt2020-03-08 18:30 28M 
[ ]scaffolds.3.asm2020-03-08 19:19 1.7M 
[ ]scaffolds.3.assembly2020-03-08 19:20 15M 
[ ]scaffolds.3.cprops2020-03-08 18:38 13M 
[ ]scaffolds.3.hic2020-03-08 19:27 79M 
[TXT]scaffolds.3_asm.scaffold_track.txt2020-03-08 19:20 41M 
[TXT]scaffolds.3_asm.superscaf_track.txt2020-03-08 19:20 28M 
[ ]scaffolds.4.asm2020-03-08 20:08 1.8M 
[ ]scaffolds.4.assembly2020-03-08 20:09 15M 
[ ]scaffolds.4.cprops2020-03-08 19:30 13M 
[ ]scaffolds.4.hic2020-03-08 20:16 79M 
[TXT]scaffolds.4_asm.scaffold_track.txt2020-03-08 20:09 41M 
[TXT]scaffolds.4_asm.superscaf_track.txt2020-03-08 20:09 29M 
[ ]scaffolds.5.asm2020-03-08 20:51 1.8M 
[ ]scaffolds.5.assembly2020-03-08 20:52 15M 
[ ]scaffolds.5.cprops2020-03-08 20:19 13M 
[ ]scaffolds.5.hic2020-03-08 20:59 80M 
[TXT]scaffolds.5_asm.scaffold_track.txt2020-03-08 20:52 42M 
[TXT]scaffolds.5_asm.superscaf_track.txt2020-03-08 20:52 30M 
[ ]scaffolds.6.asm2020-03-08 21:36 1.8M 
[ ]scaffolds.6.assembly2020-03-08 21:36 16M 
[ ]scaffolds.6.cprops2020-03-08 21:01 14M 
[ ]scaffolds.6.hic2020-03-08 21:43 80M 
[TXT]scaffolds.6_asm.scaffold_track.txt2020-03-08 21:36 42M 
[TXT]scaffolds.6_asm.superscaf_track.txt2020-03-08 21:36 30M 
[ ]scaffolds.7.asm2020-03-08 22:23 1.8M 
[ ]scaffolds.7.assembly2020-03-08 22:24 16M 
[ ]scaffolds.7.cprops2020-03-08 21:45 14M 
[ ]scaffolds.7.hic2020-03-08 22:30 80M 
[TXT]scaffolds.7_asm.scaffold_track.txt2020-03-08 22:24 43M 
[TXT]scaffolds.7_asm.superscaf_track.txt2020-03-08 22:24 30M 
[ ]scaffolds.8.asm2020-03-08 23:07 1.8M 
[ ]scaffolds.8.assembly2020-03-08 23:08 16M 
[ ]scaffolds.8.cprops2020-03-08 22:33 14M 
[ ]scaffolds.8.hic2020-03-08 23:14 80M 
[TXT]scaffolds.8_asm.scaffold_track.txt2020-03-08 23:08 43M 
[TXT]scaffolds.8_asm.superscaf_track.txt2020-03-08 23:08 30M 
[ ]scaffolds.9.asm2020-03-08 23:47 1.8M 
[ ]scaffolds.9.assembly2020-03-08 23:48 16M 
[ ]scaffolds.9.cprops2020-03-08 23:17 14M 
[ ]scaffolds.9.hic2020-03-08 23:54 81M 
[TXT]scaffolds.9_asm.scaffold_track.txt2020-03-08 23:48 43M 
[TXT]scaffolds.9_asm.superscaf_track.txt2020-03-08 23:48 30M 
[ ]scaffolds.10.asm2020-03-09 00:29 1.8M 
[ ]scaffolds.10.assembly2020-03-09 00:30 16M 
[ ]scaffolds.10.cprops2020-03-08 23:57 14M 
[ ]scaffolds.10.hic2020-03-09 00:36 81M 
[TXT]scaffolds.10_asm.scaffold_track.txt2020-03-09 00:30 43M 
[TXT]scaffolds.10_asm.superscaf_track.txt2020-03-09 00:30 31M 
[ ]scaffolds.11.asm2020-03-09 01:04 1.8M 
[ ]scaffolds.11.assembly2020-03-09 01:05 16M 
[ ]scaffolds.11.cprops2020-03-09 00:39 14M 
[ ]scaffolds.11.hic2020-03-09 01:12 81M 
[TXT]scaffolds.11_asm.scaffold_track.txt2020-03-09 01:05 43M 
[TXT]scaffolds.11_asm.superscaf_track.txt2020-03-09 01:05 31M 
[ ]scaffolds.12.asm2020-03-09 01:39 1.8M 
[ ]scaffolds.12.assembly2020-03-09 01:39 16M 
[ ]scaffolds.12.cprops2020-03-09 01:14 14M 
[ ]scaffolds.12.hic2020-03-09 01:46 81M 
[TXT]scaffolds.12_asm.scaffold_track.txt2020-03-09 01:39 43M 
[TXT]scaffolds.12_asm.superscaf_track.txt2020-03-09 01:39 31M 
[ ]scaffolds.13.asm2020-03-09 02:12 1.8M 
[ ]scaffolds.13.assembly2020-03-09 02:13 16M 
[ ]scaffolds.13.cprops2020-03-09 01:48 14M 
[ ]scaffolds.13.hic2020-03-09 02:20 81M 
[TXT]scaffolds.13_asm.scaffold_track.txt2020-03-09 02:13 43M 
[TXT]scaffolds.13_asm.superscaf_track.txt2020-03-09 02:13 31M 
[ ]scaffolds.14.asm2020-03-09 02:46 1.8M 
[ ]scaffolds.14.assembly2020-03-09 02:47 16M 
[ ]scaffolds.14.cprops2020-03-09 02:22 14M 
[ ]scaffolds.14.hic2020-03-09 02:53 81M 
[TXT]scaffolds.14_asm.scaffold_track.txt2020-03-09 02:47 44M 
[TXT]scaffolds.14_asm.superscaf_track.txt2020-03-09 02:47 31M 
[ ]scaffolds.15.asm2020-03-09 03:17 1.8M 
[ ]scaffolds.15.assembly2020-03-09 03:18 16M 
[ ]scaffolds.15.cprops2020-03-09 02:56 14M 
[ ]scaffolds.15.hic2020-03-09 03:24 81M 
[TXT]scaffolds.15_asm.scaffold_track.txt2020-03-09 03:18 44M 
[TXT]scaffolds.15_asm.superscaf_track.txt2020-03-09 03:18 31M 
[ ]scaffolds.16.asm2020-03-09 03:48 1.9M 
[ ]scaffolds.16.assembly2020-03-09 03:49 16M 
[ ]scaffolds.16.cprops2020-03-09 03:27 14M 
[ ]scaffolds.16.hic2020-03-09 03:55 81M 
[TXT]scaffolds.16_asm.scaffold_track.txt2020-03-09 03:49 44M 
[TXT]scaffolds.16_asm.superscaf_track.txt2020-03-09 03:49 31M 
[ ]scaffolds.17.asm2020-03-09 04:21 1.9M 
[ ]scaffolds.17.assembly2020-03-09 04:21 16M 
[ ]scaffolds.17.cprops2020-03-09 03:58 14M 
[ ]scaffolds.17.hic2020-03-09 04:27 81M 
[TXT]scaffolds.17_asm.scaffold_track.txt2020-03-09 04:21 44M 
[TXT]scaffolds.17_asm.superscaf_track.txt2020-03-09 04:21 31M 
[ ]scaffolds.18.asm2020-03-09 04:52 1.9M 
[ ]scaffolds.18.assembly2020-03-09 04:53 16M 
[ ]scaffolds.18.cprops2020-03-09 04:30 14M 
[ ]scaffolds.18.hic2020-03-09 04:59 81M 
[TXT]scaffolds.18_asm.scaffold_track.txt2020-03-09 04:53 44M 
[TXT]scaffolds.18_asm.superscaf_track.txt2020-03-09 04:53 31M 
[ ]scaffolds.19.asm2020-03-09 05:25 1.9M 
[ ]scaffolds.19.assembly2020-03-09 05:26 16M 
[ ]scaffolds.19.cprops2020-03-09 05:02 14M 
[ ]scaffolds.19.hic2020-03-09 05:32 81M 
[TXT]scaffolds.19_asm.scaffold_track.txt2020-03-09 05:26 44M 
[TXT]scaffolds.19_asm.superscaf_track.txt2020-03-09 05:26 31M 
[ ]scaffolds.FINAL.assembly2020-03-10 04:51 15M 
[ ]scaffolds.FINAL.fasta2020-03-10 04:51 499M 
[ ]scaffolds.FINAL.hic2020-03-10 05:00 101M 
[TXT]scaffolds.FINAL_asm.scaffold_track.txt2020-03-10 04:52 40M 
[TXT]scaffolds.FINAL_asm.superscaf_track.txt2020-03-10 04:52 31M 
[ ]scaffolds.cprops2020-03-08 13:02 12M 
[TXT]scaffolds.edits.txt2020-03-09 05:02 4.1M 
[ ]scaffolds.final.asm2020-03-10 04:17 1.9M 
[ ]scaffolds.final.assembly2020-03-10 04:19 15M 
[ ]scaffolds.final.cprops2020-03-10 04:16 13M 
[ ]scaffolds.final.fasta2020-03-10 04:26 322M 
[ ]scaffolds.final.hic2020-03-10 04:26 100M 
[TXT]scaffolds.mnd.txt2020-03-08 00:22 7.4G 
[ ]scaffolds.polished.asm2020-03-10 03:56 3.7M 
[ ]scaffolds.polished.cprops2020-03-09 05:36 14M 
[ ]scaffolds.polished.depletion_score_narrow.wig2020-03-09 05:34 3.7M 
[ ]scaffolds.polished.depletion_score_wide.wig2020-03-09 05:33 53K 
[TXT]scaffolds.polished.edits_2D.txt2020-03-09 05:35 47  
[ ]scaffolds.polished.hic2020-03-10 04:04 101M 
[ ]scaffolds.polished.mismatch_narrow.bed2020-03-09 05:34 123K 
[ ]scaffolds.polished.mismatch_wide.bed2020-03-09 05:33 162  
[TXT]scaffolds.polished.mismatches_2D.txt2020-03-09 05:35 47  
[ ]scaffolds.polished.split.assembly2020-03-10 04:09 18M 
[ ]scaffolds.polished.split.depletion_score_narrow.wig2020-03-10 04:05 3.8M 
[ ]scaffolds.polished.split.depletion_score_wide.wig2020-03-10 04:04 54K 
[TXT]scaffolds.polished.split.edits_2D.txt2020-03-10 04:05 47  
[ ]scaffolds.polished.split.mismatch_narrow.bed2020-03-10 04:05 124K 
[ ]scaffolds.polished.split.mismatch_wide.bed2020-03-10 04:04 174  
[TXT]scaffolds.polished.split.mismatches_2D.txt2020-03-10 04:05 47  
[TXT]scaffolds.polished.split.suspicious_2D.txt2020-03-10 04:05 47  
[TXT]scaffolds.polished.suspect_2D.txt2020-03-09 05:35 47  
[TXT]scaffolds.polished_asm.scaffold_track.txt2020-03-10 03:57 44M 
[TXT]scaffolds.polished_asm.superscaf_track.txt2020-03-10 03:57 56M 
[ ]scaffolds.rawchrom.asm2020-03-10 04:17 1.9M 
[ ]scaffolds.rawchrom.assembly2020-03-10 04:19 15M 
[ ]scaffolds.rawchrom.cprops2020-03-10 04:16 13M 
[ ]scaffolds.rawchrom.fasta2020-03-10 04:26 322M 
[ ]scaffolds.rawchrom.hic2020-03-10 04:26 100M 
[TXT]scaffolds.rawchrom_asm.scaffold_track.txt2020-03-10 04:19 40M 
[TXT]scaffolds.rawchrom_asm.superscaf_track.txt2020-03-10 04:19 31M 
[ ]scaffolds.resolved.asm2020-03-09 05:25 1.9M 
[ ]scaffolds.resolved.cprops2020-03-09 05:02 14M 
[ ]scaffolds.resolved.hic2020-03-09 05:32 81M 
[ ]scaffolds.resolved.polish.assembly2020-03-10 03:57 18M 
[TXT]scaffolds.resolved_asm.scaffold_track.txt2020-03-09 05:26 44M 
[TXT]scaffolds.resolved_asm.superscaf_track.txt2020-03-09 05:26 31M 
[ ]scaffolds.split.asm2020-03-10 04:08 3.7M 
[ ]scaffolds.split.assembly2020-03-10 04:16 18M 
[ ]scaffolds.split.cprops2020-03-10 04:07 14M 
[ ]scaffolds.split.hic2020-03-10 04:16 101M 
[TXT]scaffolds.split_asm.scaffold_track.txt2020-03-10 04:09 44M 
[TXT]scaffolds.split_asm.superscaf_track.txt2020-03-10 04:09 61M 
[DIR]seal/2020-03-08 13:02 -  
[DIR]split/2020-03-08 13:02 -  
[DIR]split_chrom_aware/2020-03-08 13:02 -  
[DIR]supp/2020-03-08 13:02 -  
[ ]suspect.at.step.0.bed2020-03-08 16:47 172K 
[ ]suspect.at.step.1.bed2020-03-08 17:45 142K 
[ ]suspect.at.step.2.bed2020-03-08 18:37 126K 
[ ]suspect.at.step.3.bed2020-03-08 19:28 129K 
[ ]suspect.at.step.4.bed2020-03-08 20:17 123K 
[ ]suspect.at.step.5.bed2020-03-08 21:00 121K 
[ ]suspect.at.step.6.bed2020-03-08 21:44 121K 
[ ]suspect.at.step.7.bed2020-03-08 22:32 123K 
[ ]suspect.at.step.8.bed2020-03-08 23:15 125K 
[ ]suspect.at.step.9.bed2020-03-08 23:55 126K 
[ ]suspect.at.step.10.bed2020-03-09 00:37 126K 
[ ]suspect.at.step.11.bed2020-03-09 01:13 129K 
[ ]suspect.at.step.12.bed2020-03-09 01:47 130K 
[ ]suspect.at.step.13.bed2020-03-09 02:21 130K 
[ ]suspect.at.step.14.bed2020-03-09 02:54 130K 
[ ]suspect.at.step.15.bed2020-03-09 03:25 133K 
[ ]suspect.at.step.16.bed2020-03-09 03:56 132K 
[ ]suspect.at.step.17.bed2020-03-09 04:28 132K 
[ ]suspect.at.step.18.bed2020-03-09 05:00 131K 
[ ]suspect.at.step.19.bed2020-03-09 05:33 131K 
[TXT]suspect_2D.at.step.0.txt2020-03-08 16:47 1.3M 
[TXT]suspect_2D.at.step.1.txt2020-03-08 17:45 779K 
[TXT]suspect_2D.at.step.2.txt2020-03-08 18:37 14K 
[TXT]suspect_2D.at.step.3.txt2020-03-08 19:28 581K 
[TXT]suspect_2D.at.step.4.txt2020-03-08 20:17 433K 
[TXT]suspect_2D.at.step.5.txt2020-03-08 21:00 268K 
[TXT]suspect_2D.at.step.6.txt2020-03-08 21:44 236K 
[TXT]suspect_2D.at.step.7.txt2020-03-08 22:32 187K 
[TXT]suspect_2D.at.step.8.txt2020-03-08 23:16 136K 
[TXT]suspect_2D.at.step.9.txt2020-03-08 23:55 109K 
[TXT]suspect_2D.at.step.10.txt2020-03-09 00:37 101K 
[TXT]suspect_2D.at.step.11.txt2020-03-09 01:13 87K 
[TXT]suspect_2D.at.step.12.txt2020-03-09 01:47 73K 
[TXT]suspect_2D.at.step.13.txt2020-03-09 02:21 60K 
[TXT]suspect_2D.at.step.14.txt2020-03-09 02:54 53K 
[TXT]suspect_2D.at.step.15.txt2020-03-09 03:25 1.9K 
[TXT]suspect_2D.at.step.16.txt2020-03-09 03:56 56K 
[TXT]suspect_2D.at.step.17.txt2020-03-09 04:28 52K 
[TXT]suspect_2D.at.step.18.txt2020-03-09 05:00 11K 
[TXT]suspect_2D.at.step.19.txt2020-03-09 05:33 47  
[DIR]utils/2020-03-08 13:02 -  
[DIR]visualize/2022-02-08 17:14 -  
[ ]z2020-03-08 13:02 354  
[ ]zL1194-3D.1.err2020-03-10 04:52 3.1K 
[ ]zL1194-3D.1.out2020-03-10 05:00 255K 
[ ]zL1194-3D.1.sbatch2020-03-08 13:02 558  
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