Index of /kundaje/marinovg/oak/Symbiodinium/2017-06-03-Symbiodinium-splicing

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]DESeq2-eXpress-microadriaticum/2018-11-19 18:26 -  
[ ]SAMstats-smic_16C_R1-SRR3337500-STAR-2.5.3a2017-06-06 00:43 177  
[ ]SAMstats-smic_16C_R2-SRR3337501-STAR-2.5.3a2017-06-06 00:28 177  
[ ]SAMstats-smic_16C_R3-SRR3337502-STAR-2.5.3a2017-06-06 00:32 177  
[ ]SAMstats-smic_36C_R1-SRR3337503-STAR-2.5.3a2017-06-06 00:20 176  
[ ]SAMstats-smic_36C_R2-SRR3337504-STAR-2.5.3a2017-06-06 00:47 177  
[ ]SAMstats-smic_36C_R3-SRR3337505-STAR-2.5.3a2017-06-06 01:00 177  
[ ]SAMstats-smic_DS_R1-SRR3337495-STAR-2.5.3a2017-06-06 00:17 177  
[ ]SAMstats-smic_DS_R2-SRR3337496-STAR-2.5.3a2017-06-06 01:08 177  
[ ]SAMstats-smic_DS_R3-SRR3337497-STAR-2.5.3a2017-06-06 00:34 177  
[ ]SAMstats-smic_nn_R1-SRR3337498-STAR-2.5.3a2017-06-06 00:24 177  
[ ]SAMstats-smic_nn_R2-SRR3337493-STAR-2.5.3a2017-06-05 23:10 174  
[ ]SAMstats-smic_nn_R3-SRR3337494-STAR-2.5.3a2017-06-06 00:20 177  
[ ]SAMstats.files2017-06-03 16:33 1.9K 
[TXT]SAMstats.sh2017-06-05 22:18 9.3K 
[ ]SAMstats.table2017-06-06 02:20 2.2K 
[TXT]STAR-generate-mm10.sh2017-06-03 16:40 445  
[TXT]STAR-generate.sh2017-06-03 16:26 605  
[TXT]STAR-map.sh2017-06-05 09:04 11K 
[TXT]bowtie-build.sh2017-06-03 16:27 374  
[TXT]count_fastq_lines.sh2017-06-06 20:46 948  
[ ]coverage.files2017-06-06 20:38 2.1K 
[TXT]coverage.sh2017-06-06 16:33 8.7K 
[ ]coverage.table2017-06-06 20:39 36K 
[DIR]coverage_files/2017-06-06 20:56 -  
[DIR]express-1.5.1-smic_16C_R1-SRR3337500.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_16C_R2-SRR3337501.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_16C_R3-SRR3337502.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_36C_R1-SRR3337503.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_36C_R2-SRR3337504.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_36C_R3-SRR3337505.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_DS_R1-SRR3337495.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_DS_R2-SRR3337496.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_DS_R3-SRR3337497.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_nn_R1-SRR3337498.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_nn_R2-SRR3337493.Smic.genome.annotation/2018-11-19 18:03 -  
[DIR]express-1.5.1-smic_nn_R3-SRR3337494.Smic.genome.annotation/2018-11-19 18:03 -  
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF.files2018-11-19 20:19 885  
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF.table2018-11-19 20:19 9.6K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF12018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF22018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF32018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF42018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF52018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF62018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF72018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF82018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF92018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF102018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF112018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.eCDF122018-11-19 18:26 1.2K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.files2018-11-19 16:25 1.3K 
[ ]express-1.5.1.Smic.genome.annotation.TPM.minTPM10.log2FPKM+1.table2018-11-19 18:04 4.2M 
[ ]express-1.5.1.Smic.genome.annotation.TPM.minTPM10.normalizedToMean.table2018-11-19 18:04 5.9M 
[ ]express-1.5.1.Smic.genome.annotation.TPM.table2018-11-19 18:04 4.9M 
[ ]express-1.5.1.Smic.genome.annotation.eff_counts.files2018-11-19 16:26 1.3K 
[ ]express-1.5.1.Smic.genome.annotation.eff_counts.sumDups.int.table2018-11-19 18:04 2.3M 
[ ]express-1.5.1.Smic.genome.annotation.eff_counts.sumDups.table2018-11-19 18:04 5.3M 
[ ]express-1.5.1.Smic.genome.annotation.eff_counts.table2018-11-19 18:04 5.3M 
[DIR]express-mapping-logs-microadtriaticum/2018-11-19 17:20 -  
[TXT]fastq-dump.sh2017-06-03 16:00 1.7K 
[TXT]gzip.sh2017-06-06 02:20 3.5K 
[TXT]junctionsfromBAM.sh2017-06-05 22:17 4.5K 
[TXT]makewiggle.sh2017-06-03 16:54 17K 
[TXT]sam_reads_in_genes-rerun.sh2017-06-06 19:44 1.9K 
[ ]sam_reads_in_genes.files2017-06-06 20:48 2.2K 
[TXT]sam_reads_in_genes.sh2017-06-06 00:23 11K 
[ ]sam_reads_in_genes.table2017-06-06 20:49 1.9K 
[DIR]sam_reads_in_genes/2017-06-06 20:57 -  
[TXT]samtools-index.sh2017-06-05 11:08 3.4K 
[DIR]smic_16C_R1-SRR3337500-STAR-2.5.3a/2025-04-06 21:05 -  
[ ]smic_16C_R1-SRR3337500_1.lines2017-06-06 21:03 10  
[DIR]smic_16C_R2-SRR3337501-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_16C_R2-SRR3337501_1.lines2017-06-06 21:00 10  
[DIR]smic_16C_R3-SRR3337502-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_16C_R3-SRR3337502_1.lines2017-06-06 21:00 10  
[DIR]smic_36C_R1-SRR3337503-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_36C_R1-SRR3337503_1.lines2017-06-06 20:58 9  
[DIR]smic_36C_R2-SRR3337504-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_36C_R2-SRR3337504_1.lines2017-06-06 21:01 10  
[DIR]smic_36C_R3-SRR3337505-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_36C_R3-SRR3337505_1.lines2017-06-06 21:02 10  
[DIR]smic_DS_R1-SRR3337495-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_DS_R1-SRR3337495_1.lines2017-06-06 21:00 10  
[DIR]smic_DS_R2-SRR3337496-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_DS_R2-SRR3337496_1.lines2017-06-06 21:07 10  
[DIR]smic_DS_R3-SRR3337497-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_DS_R3-SRR3337497_1.lines2017-06-06 21:01 10  
[DIR]smic_nn_R1-SRR3337498-STAR-2.5.3a/2025-04-06 21:06 -  
[ ]smic_nn_R1-SRR3337498_1.lines2017-06-06 21:00 10  
[DIR]smic_nn_R2-SRR3337493-STAR-2.5.3a/2025-04-06 21:07 -  
[ ]smic_nn_R2-SRR3337493_1.lines2017-06-06 20:55 9  
[DIR]smic_nn_R3-SRR3337494-STAR-2.5.3a/2025-04-06 21:07 -  
[ ]smic_nn_R3-SRR3337494_1.lines2017-06-06 21:01 10  
[TXT]stringtie.sh2017-06-07 16:16 15K 
[TXT]tophat-1.sh2017-12-01 03:56 0  
[TXT]tophat-2.sh2017-06-05 08:37 10K 
[ ]z2017-06-06 20:02 384  
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443