python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L01_exp210122_MS652c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L01_exp210122_MS652c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L01_exp210122_MS652c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L01_exp210122_MS652c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L02_exp210122_MS656c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L02_exp210122_MS656c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L02_exp210122_MS656c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L02_exp210122_MS656c1_SCD_EtOH-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L03_exp210122_MS652c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L03_exp210122_MS652c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L03_exp210122_MS652c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L03_exp210122_MS652c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L04_exp210122_MS656c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L04_exp210122_MS656c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L04_exp210122_MS656c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L04_exp210122_MS656c1_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L05_exp210122_MS652c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L05_exp210122_MS652c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L05_exp210122_MS652c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L05_exp210122_MS652c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L06_exp210122_MS656c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L06_exp210122_MS656c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L06_exp210122_MS656c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L06_exp210122_MS656c1_SCD_50-ATC-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L07_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L07_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L07_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L07_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L08_exp210122_MS652c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L08_exp210122_MS652c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L08_exp210122_MS652c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L08_exp210122_MS652c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L09_exp210122_MS656c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L09_exp210122_MS656c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L09_exp210122_MS656c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L09_exp210122_MS656c2_SCD_EtOH-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L10_exp210122_MS652c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L10_exp210122_MS652c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L10_exp210122_MS652c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L10_exp210122_MS652c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L11_exp210122_MS656c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L11_exp210122_MS656c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L11_exp210122_MS656c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L11_exp210122_MS656c2_SCD_50-ATC-30min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L12_exp210122_MS652c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L12_exp210122_MS652c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L12_exp210122_MS652c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L12_exp210122_MS652c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L13_exp210122_MS656c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L13_exp210122_MS656c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L13_exp210122_MS656c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L13_exp210122_MS656c2_SCD_50-ATC-45min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L14_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L14_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L14_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L14_exp210122_MS205_SCD_RAPA-60min_AB01.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L15_exp210122_MS652c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L15_exp210122_MS652c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L15_exp210122_MS652c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L15_exp210122_MS652c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L16_exp210122_MS656c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L16_exp210122_MS656c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L16_exp210122_MS656c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L16_exp210122_MS656c1_SCD_EtOH-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L17_exp210122_MS652c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L17_exp210122_MS652c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L17_exp210122_MS652c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L17_exp210122_MS652c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L18_exp210122_MS656c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L18_exp210122_MS656c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L18_exp210122_MS656c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L18_exp210122_MS656c1_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L19_exp210122_MS652c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L19_exp210122_MS652c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L19_exp210122_MS652c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L19_exp210122_MS652c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L20_exp210122_MS656c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L20_exp210122_MS656c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L20_exp210122_MS656c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L20_exp210122_MS656c1_SCD_50-ATC-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L21_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L21_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L21_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L21_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L22_exp210122_MS652c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L22_exp210122_MS652c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L22_exp210122_MS652c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L22_exp210122_MS652c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L23_exp210122_MS656c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L23_exp210122_MS656c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L23_exp210122_MS656c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L23_exp210122_MS656c2_SCD_EtOH-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L24_exp210122_MS652c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L24_exp210122_MS652c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L24_exp210122_MS652c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L24_exp210122_MS652c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L25_exp210122_MS656c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L25_exp210122_MS656c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L25_exp210122_MS656c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L25_exp210122_MS656c2_SCD_50-ATC-30min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L26_exp210122_MS652c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L26_exp210122_MS652c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L26_exp210122_MS652c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L26_exp210122_MS652c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L27_exp210122_MS656c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L27_exp210122_MS656c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L27_exp210122_MS656c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L27_exp210122_MS656c2_SCD_50-ATC-45min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L28_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L28_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp_sacCer.wig
python /oak/stanford/groups/akundaje/marinovg/code/columnRename.py 2021-02-23-210128L28_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment.wig 0 /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/sacCer3.old_to_new 1 0 > 2021-02-23-210128L28_exp210122_MS205_SCD_RAPA-60min_input.2x36mers.sacCer3.a.nochrM.ERMTOC.fragment_sacCer.wig