python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.tRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snoRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.snRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.sacCer3.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.tRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snoRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.snRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.tRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.bigWig signalAround-TSS.sacCer3.tRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snoRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.bigWig signalAround-TSS.sacCer3.snoRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.snRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.bigWig signalAround-TSS.sacCer3.snRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Saccharomyces_cerevisiae.SacCer_Apr2011.20.rRNA.RDN5.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp.bigWig signalAround-TSS.sacCer3.rRNA.RDN5.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.sacCer3.a.nochrM.ERMTOC.fragmentMidPoint_50bp
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM.bigWig signalAround-TSS.S_pombe.tRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM.bigWig signalAround-TSS.S_pombe.snRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM.bigWig signalAround-TSS.S_pombe.snoRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.1x36mers.Schizosaccharomyces_pombe.ASM294v2.20.unique.nochrM
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.tRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.tRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC
python /oak/stanford/groups/akundaje/marinovg/code/signalAroundCoordinate-BW.py /oak/stanford/groups/akundaje/marinovg/Stanford_bootcamp/combined_indexes/Schizosaccharomyces_pombe.2019-02-06-PomBase.fixed.snoRNA.genes 0 1 3 500 210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC.bigWig signalAround-TSS.S_pombe.snoRNA.210121L01_exp201015_MS214_SCGE_RAPA-00min_DNA.2x36mers.Schizosaccharomyces_pombe.ASM294v2.20.a.nochrM.ERMTOC