Index of /kundaje/marinovg/oak/Stanford_bootcamp/2017/2019-03-08-Multimappers-remapping-no-mito-no-cross-species

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]RPM-RPKM-files.tar.gz2019-09-01 07:36 1.2G 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.Candida.RPKM.files2019-03-10 11:29 42K 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.Candida.RPKM.table.gz2019-09-01 07:28 12M 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.Candida.RPM.files2019-03-10 11:29 42K 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.Candida.RPM.table.gz2019-09-01 07:28 12M 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.files2019-03-10 11:30 23K 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.table.gz2019-09-01 07:28 7.0M 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.files2019-03-10 11:30 23K 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.table.gz2019-09-01 07:28 7.0M 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPKM.files2019-03-10 11:30 64K 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPKM.table.gz2019-09-01 07:29 24M 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.files2019-03-10 11:30 64K 
[ ]TSS-250bp-350bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.table.gz2019-09-01 07:29 24M 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.Candida.RPKM.files2019-03-08 21:39 43K 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.Candida.RPKM.table.gz2019-09-01 07:28 11M 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.Candida.RPM.files2019-03-08 21:39 42K 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.Candida.RPM.table.gz2019-09-01 07:28 11M 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.files2019-03-08 21:33 24K 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.table.gz2019-03-10 08:13 6.9M 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.files2019-03-08 21:33 24K 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.table.gz2019-09-01 07:27 6.9M 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPKM.files2019-03-08 21:44 65K 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPKM.table.gz2019-09-01 07:28 24M 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.files2019-03-08 21:44 65K 
[ ]TSS-upstream500bp.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.table.gz2019-09-01 07:28 24M 
[ ]TSSupstream500bp.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.table.gz2019-09-01 07:27 6.9M 
[TXT]bedRPKMfromBAM.sh2019-03-10 09:51 5.3M 
[DIR]cross-mapping-files/2019-03-10 09:44 -  
[ ]cumulativeGeneProfiles.Candida.500bp.smooth10.table.gz2019-03-10 07:23 6.3M 
[ ]cumulativeGeneProfiles.Candida.500bp.table.gz2019-03-10 07:33 5.9M 
[ ]cumulativeGeneProfiles.Candida.1000bp.smooth10.table.gz2019-03-10 07:46 12M 
[ ]cumulativeGeneProfiles.Candida.1000bp.table.gz2019-03-10 07:38 11M 
[ ]cumulativeGeneProfiles.Candida.files2019-03-08 20:21 104K 
[ ]cumulativeGeneProfiles.S_pombe.500bp.smooth10.table.gz2019-03-10 06:27 3.4M 
[ ]cumulativeGeneProfiles.S_pombe.500bp.table.gz2019-03-10 06:13 3.2M 
[ ]cumulativeGeneProfiles.S_pombe.1000bp.smooth10.table.gz2019-03-10 06:33 6.2M 
[ ]cumulativeGeneProfiles.S_pombe.1000bp.table.gz2019-03-10 06:16 5.3M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile1.500bp.smooth10.table.gz2019-03-10 06:02 3.0M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile1.500bp.table.gz2019-03-10 06:05 2.6M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile1.1000bp.smooth10.table.gz2019-03-10 06:13 5.9M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile1.1000bp.table.gz2019-03-10 06:06 4.9M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile5.500bp.smooth10.table.gz2019-03-10 06:04 3.1M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile5.500bp.table.gz2019-03-10 06:01 2.5M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile5.1000bp.smooth10.table.gz2019-03-10 06:09 5.6M 
[ ]cumulativeGeneProfiles.S_pombe.expression_quintile5.1000bp.table.gz2019-03-10 06:05 4.6M 
[ ]cumulativeGeneProfiles.S_pombe.files2019-03-09 02:14 52K 
[ ]cumulativeGeneProfiles.S_pombe.mRNA.500bp.smooth10.table.gz2019-03-10 06:16 3.4M 
[ ]cumulativeGeneProfiles.S_pombe.mRNA.500bp.table.gz2019-03-10 06:14 3.1M 
[ ]cumulativeGeneProfiles.S_pombe.mRNA.1000bp.smooth10.table.gz2019-03-10 06:18 6.6M 
[ ]cumulativeGeneProfiles.S_pombe.mRNA.1000bp.table.gz2019-03-10 06:14 5.8M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.500bp.smooth10.table.gz2019-03-10 09:13 9.6M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.500bp.table.gz2019-03-10 08:52 9.1M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.1000bp.smooth10.table.gz2019-03-10 09:34 18M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.1000bp.table.gz2019-03-10 09:14 16M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile1.500bp.smooth10.table.gz2019-03-10 08:09 8.9M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile1.500bp.table.gz2019-03-10 08:19 8.0M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile1.1000bp.smooth10.table.gz2019-03-10 08:04 16M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile1.1000bp.table.gz2019-03-10 08:09 14M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile5.500bp.smooth10.table.gz2019-03-10 08:25 8.6M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile5.500bp.table.gz2019-03-10 08:23 7.6M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile5.1000bp.smooth10.table.gz2019-03-10 08:17 16M 
[ ]cumulativeGeneProfiles.sacCer3.TIF-seq-updated.expression_quintile5.1000bp.table.gz2019-03-10 08:23 15M 
[ ]cumulativeGeneProfiles.sacCer3.files2019-03-08 20:21 140K 
[ ]cumulativeGeneProfiles.sacCer3.protein_coding.500bp.smooth10.table.gz2019-03-10 08:30 9.2M 
[ ]cumulativeGeneProfiles.sacCer3.protein_coding.500bp.table.gz2019-03-10 08:25 8.3M 
[ ]cumulativeGeneProfiles.sacCer3.protein_coding.1000bp.smooth10.table.gz2019-03-10 08:49 17M 
[ ]cumulativeGeneProfiles.sacCer3.protein_coding.1000bp.table.gz2019-03-10 08:32 15M 
[ ]cumulativeGeneProfiles.sacCer3.rRNA.RDN37.500bp.smooth10.table.gz2019-03-10 07:41 7.3M 
[ ]cumulativeGeneProfiles.sacCer3.rRNA.RDN37.500bp.table.gz2019-03-10 07:09 5.8M 
[ ]cumulativeGeneProfiles.sacCer3.rRNA.RDN37.1000bp.smooth10.table.gz2019-03-10 07:59 15M 
[ ]cumulativeGeneProfiles.sacCer3.rRNA.RDN37.1000bp.table.gz2019-03-10 07:10 12M 
[ ]genes.with_multimappers.nochrM.ERMTOC.Candida.RKPM.files2019-03-08 21:40 38K 
[ ]genes.with_multimappers.nochrM.ERMTOC.Candida.RPKM.table.gz2019-03-10 08:09 12M 
[ ]genes.with_multimappers.nochrM.ERMTOC.Candida.RPM.files2019-03-08 21:40 38K 
[ ]genes.with_multimappers.nochrM.ERMTOC.Candida.RPM.table.gz2019-03-10 08:09 12M 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RKPM.files2019-03-08 21:34 21K 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.table.gz2019-03-10 08:08 7.9M 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.files2019-03-08 21:34 21K 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.mRNA.table.gz2019-03-10 10:26 5.7M 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.rRNA.5S.table.gz2019-03-10 10:26 41K 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.rRNA.21S-16S.table.gz2019-03-10 10:27 2.6K 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.tRNA.table.gz2019-03-10 10:27 134K 
[ ]genes.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.table.gz2019-03-10 08:08 7.7M 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RKPM.files2019-03-08 21:45 58K 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPKM.table.gz2019-03-10 08:13 25M 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.files2019-03-08 21:45 57K 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.protein_coding.table.gz2019-03-10 10:23 23M 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.rRNA.RDN5.table.gz2019-03-10 10:25 17K 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.rRNA.RDN37.table.gz2019-03-10 10:24 12K 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.tRNA.table.gz2019-03-10 10:25 1.0M 
[ ]genes.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.table.gz2019-03-10 08:13 25M 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.Candida.RKPM.files2019-03-08 21:40 41K 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.Candida.RPKM.table.gz2019-03-10 08:12 12M 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.Candida.RPM.files2019-03-08 21:40 41K 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.Candida.RPM.table.gz2019-03-10 08:12 12M 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.S_pombe.RKPM.files2019-03-08 21:34 23K 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.S_pombe.RPKM.table.gz2019-03-10 08:12 8.1M 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.files2019-03-08 21:34 23K 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.S_pombe.RPM.table.gz2019-03-10 08:12 7.8M 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.sacCer3.RKPM.files2019-03-08 21:45 63K 
[ ]genes_500bp_ext.with_multimappers.nochrM.ERMTOC.sacCer3.RPM.files2019-03-08 21:45 63K 
[ ]referenceChIPNormalizationFactors.TSS-250bp-350bp.config2019-03-10 11:17 5.1K 
[ ]referenceChIPNormalizationFactors.TSS-250bp-350bp.table.gz2019-03-10 20:39 1.0K 
[ ]referenceChIPNormalizationFactors.TSS-500bp.config2019-03-10 11:17 5.2K 
[ ]referenceChIPNormalizationFactors.TSS-500bp.table.gz2019-03-10 11:18 1.0K 
[ ]referenceChIPNormalizationFactors.mRNA.config2019-03-10 10:44 7.2K 
[ ]referenceChIPNormalizationFactors.mRNA.table.gz2019-03-10 10:57 1.3K 
[ ]referenceChIPNormalizationFactors.rRNA-5S.config2019-03-10 10:51 1.2K 
[ ]referenceChIPNormalizationFactors.rRNA-5S.table.gz2019-03-10 10:59 366  
[ ]referenceChIPNormalizationFactors.rRNA-16S-21S.config2019-03-10 10:51 1.2K 
[ ]referenceChIPNormalizationFactors.rRNA-16S-21S.table.gz2019-03-10 10:59 373  
[ ]referenceChIPNormalizationFactors.tRNA.config2019-03-10 10:54 1.1K 
[ ]referenceChIPNormalizationFactors.tRNA.table.gz2019-03-10 10:59 371  
[ ]signalAround-TSS.tar.gz2019-03-10 07:00 21M 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.S_pombe.snRNA.files2019-03-08 21:04 40K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.S_pombe.snRNA.table.gz2019-03-10 06:59 860K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.S_pombe.snoRNA.files2019-03-08 21:04 40K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.S_pombe.snoRNA.table.gz2019-03-10 06:59 1.0M 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.S_pombe.tRNA.files2019-03-08 21:03 39K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.S_pombe.tRNA.table.gz2019-03-10 06:59 1.1M 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.rRNA-RDN5.files2019-03-09 04:25 97K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.rRNA-RDN5.table.gz2019-03-10 06:59 3.5M 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.snRNA.files2019-03-08 21:10 94K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.snRNA.table.gz2019-03-10 06:59 2.9M 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.snoRNA.files2019-03-08 21:10 95K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.snoRNA.table.gz2019-03-10 06:59 3.3M 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.tRNA.files2019-03-08 21:09 94K 
[ ]signalAround-TSS.with_multimappers.nochrM.ERMTOC.sacCer3.tRNA.table.gz2019-03-10 06:59 3.3M 
[TXT]signalAroundCoordinate-BW.sh2019-03-08 21:11 1.5M 
[ ]z2019-08-29 13:32 2.7M 
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