python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepB-GSM2385312.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepC-GSM2385315.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py input_control-GSM2385318.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepA-GSM2385310.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepB-GSM2385313.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepC-GSM2385316.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepA-GSM2385311.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepB-GSM2385314.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepC-GSM2385317.2x36mers.unique.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepA-GSM2385309.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepB-GSM2385312.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepC-GSM2385315.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py input_control-GSM2385318.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepA-GSM2385310.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepB-GSM2385313.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepC-GSM2385316.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepA-GSM2385311.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepB-GSM2385314.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepC-GSM2385317.2x36mers.unique.5p.wig.TSS_profile 100 2000 >> ATACTSSscore.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepA-GSM2385309.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 > ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepB-GSM2385312.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepC-GSM2385315.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py input_control-GSM2385318.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepA-GSM2385310.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepB-GSM2385313.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepC-GSM2385316.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepA-GSM2385311.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepB-GSM2385314.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepC-GSM2385317.2x36mers.unique.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepA-GSM2385309.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepB-GSM2385312.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Early_Embryo_RepC-GSM2385315.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py input_control-GSM2385318.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepA-GSM2385310.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepB-GSM2385313.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Larval_stage_3_RepC-GSM2385316.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepA-GSM2385311.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepB-GSM2385314.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt
python /oak/stanford/groups/akundaje/marinovg/code/ATAC/ATACTSSscore.py Young_adult_RepC-GSM2385317.2x36mers.unique.5p.wig.TSS_profile 100 2000 -subtractMin 20 >> ATACTSSscore-subMin-20.txt