Index of /kundaje/marinovg/oak/Stanford_bootcamp/2017

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]2017-09-22-NucleoATACdata/2017-09-22 14:31 -  
[DIR]2017-09-23-metagene-plots/2017-09-24 12:02 -  
[DIR]2017-09-24-GC-content/2017-09-24 16:52 -  
[DIR]2017-09-yeast/2017-09-21 13:56 -  
[DIR]2017-11-10-ATAC-seq/2025-08-29 16:13 -  
[DIR]2017-12-27-ChIP-seq/2022-04-05 11:05 -  
[DIR]2018-01-10-Pol2-vs-histones/2018-01-11 01:43 -  
[DIR]2018-02-13-ChIP-seq/2022-04-05 11:05 -  
[DIR]2018-04-20-ChIP-seq/2018-04-25 12:39 -  
[DIR]2018-06-16-ChIP-seq/2018-06-18 09:39 -  
[DIR]2018-06-25-genes-RPKMs/2018-08-31 16:56 -  
[DIR]2018-07-12-ChIP-seq/2018-08-31 17:01 -  
[DIR]2018-07-30-Next-seq-run/2018-08-02 05:48 -  
[DIR]2018-09-14-Next-seq-run/2018-10-16 09:42 -  
[DIR]2018-10-14-HiSeq-run/2018-10-16 09:54 -  
[DIR]2018-10-17-scRNA-seq/2025-08-29 16:13 -  
[DIR]2018-11-08-NextSeq-run/2022-04-05 23:01 -  
[DIR]2018-11-15-diamide-RPMs/2018-11-16 10:02 -  
[DIR]2019-01-03-ChIP-data/2019-08-28 12:48 -  
[DIR]2019-01-04-TSS-normalization/2019-08-29 12:52 -  
[DIR]2019-01-05-S.pombe-metagene-plots/2019-01-09 14:07 -  
[DIR]2019-02-06-S.pombe-metagene-plots-PomBase-annotation/2019-02-09 13:02 -  
[DIR]2019-02-08-Multimappers-remapping/2025-04-21 12:56 -  
[DIR]2019-02-10-sacCer3-metagene-plots-redo/2019-02-11 08:22 -  
[DIR]2019-02-15-ChIP-data/2019-09-01 07:24 -  
[DIR]2019-02-20-chrM-mapping/2019-03-03 01:26 -  
[DIR]2019-03-08-Multimappers-remapping-no-mito-no-cross-species/2025-08-29 16:18 -  
[DIR]2019-03-09-RNA-seq/2019-03-11 20:12 -  
[DIR]2019-03-13-ChIP-data/2025-08-29 16:23 -  
[DIR]2019-03-21-tag-check/2019-03-22 21:57 -  
[DIR]2019-03-22-multiread-normalization/2019-03-22 10:22 -  
[DIR]2019-04-06-ChIP-data/2019-04-12 13:23 -  
[DIR]2019-04-15-TSS-genebody/2019-08-31 18:02 -  
[DIR]2019-04-23-TSS-genebody-2019-02-15/2019-08-31 17:56 -  
[DIR]2019-05-11-RNA-seq/2019-05-13 07:55 -  
[DIR]2019-05-16-RNA-seq/2019-06-05 09:21 -  
[DIR]2019-06-03-ChIP-data/2019-08-31 14:39 -  
[DIR]2019-07-06-RNA-seq/2019-07-07 07:38 -  
[DIR]2019-08-12-ChIP-data/2019-08-31 18:09 -  
[DIR]2019-08-21-RNA-seq/2019-08-22 17:33 -  
[DIR]2019-08-26-RPM-tables/2019-08-27 05:04 -  
[DIR]2019-08-28-ChIP-data/2019-09-04 17:55 -  
[DIR]2019-09-05-RNA-TPM-correlation-check/2019-09-05 20:11 -  
[DIR]2019-10-01-RNA-seq/2019-10-02 10:20 -  
[DIR]2019-10-07-ChIP-data/2019-10-09 07:04 -  
[DIR]2019-10-08-RPM-tables/2019-10-13 07:52 -  
[DIR]2019-10-12-RPM-tables/2019-10-13 19:52 -  
[DIR]2019-10-25-RNA-seq/2025-08-29 16:47 -  
[DIR]2019-10-28-RNA-seq/2019-10-29 12:14 -  
[DIR]2019-12-03-ChIP-data/2025-08-29 16:22 -  
[DIR]2019-12-03-RNA-seq/2019-12-04 12:02 -  
[DIR]2019-12-23-RNA-seq/2025-08-29 16:51 -  
[DIR]2019-12-24-hg38-dm6-RNA-seq-DESeq/2019-12-24 05:57 -  
[DIR]2020-01-03-ChIP-data/2020-01-07 18:18 -  
[DIR]2020-01-03-dSMF/2020-01-07 09:27 -  
[DIR]2020-02-17-RNA-seq/2020-02-19 20:26 -  
[DIR]2020-02-19-fragment-tracks/2020-02-20 11:04 -  
[DIR]2020-02-21-ChIP-data/2020-03-26 06:30 -  
[DIR]2020-03-16-ChIP-data/2020-03-22 05:22 -  
[DIR]2020-04-24-fragment-tracks-midPoint/2025-04-21 12:58 -  
[DIR]2020-05-04-fragment-tracks-midPoint-100bp/2025-04-21 12:59 -  
[DIR]2020-05-06-RPM-midPoint-50bp/2025-04-21 13:01 -  
[DIR]2020-06-18-ChIP-data/2025-04-21 12:58 -  
[DIR]2020-06-20-SLAM-seq/2020-07-10 04:42 -  
[DIR]2020-06-29-RNA-seq-rerun/2025-08-29 16:51 -  
[DIR]2020-08-27-ChIP-data-redo/2025-04-21 13:03 -  
[DIR]2020-08-27-ChIP-data/2020-08-29 13:32 -  
[DIR]2020-08-27-SLAM-seq/2020-08-30 04:10 -  
[DIR]2020-09-03-NextSeq-run/2020-09-04 10:31 -  
[DIR]2020-10-07-SLAM-seq/2020-10-09 04:46 -  
[DIR]2020-10-20-ChIP-data/2020-10-24 01:54 -  
[DIR]2020-10-20-SLAM-seq/2020-10-22 22:48 -  
[DIR]2020-10-23-SLAM-seq-QC/2020-10-24 13:41 -  
[DIR]2020-10-26-ChIP-data-rerun/2020-10-27 07:51 -  
[DIR]2020-11-05-RNA-seq/2020-11-06 11:18 -  
[DIR]2020-11-07-ATAC-seq/2020-11-12 03:55 -  
[DIR]2020-12-17-ChIP-data/2025-08-29 16:23 -  
[DIR]2020-12-20-ChIP-data-uniform-processing/2025-08-29 16:22 -  
[DIR]2021-01-30-NextSeq-run-mixed_index_rerun/2021-02-07 02:30 -  
[DIR]2021-01-30-NextSeq-run/2022-04-05 23:01 -  
[DIR]2021-02-10-NextSeq/2025-04-20 07:40 -  
[DIR]2021-02-23-ChIP-data/2021-02-25 11:55 -  
[DIR]2021-02-23-SLAM-seq/2021-02-25 01:52 -  
[DIR]2021-03-15-ChIP-data-uniform-processing/2021-03-17 06:16 -  
[DIR]2021-03-30-RNA-seq/2021-04-01 03:19 -  
[DIR]2021-03-30-SLAM-seq/2021-03-31 14:26 -  
[DIR]2021-04-01-SLAM-seq-rerun/2021-04-02 04:48 -  
[DIR]2021-04-11-RNA-seq/2021-04-12 07:52 -  
[DIR]2021-04-19-ChIP-data/2021-04-23 05:35 -  
[DIR]2021-05-21-ChIP-data-uniform-processing/2025-04-21 13:09 -  
[DIR]2021-05-25-RNA-seq/2021-05-28 19:23 -  
[DIR]2021-05-25-gDNA/2021-05-27 05:57 -  
[DIR]2021-05-26-ChIP-data-uniform-processing-last-batch-final-names/2021-05-29 05:59 -  
[DIR]2021-05-26-ChIP-data-uniform-processing-last-batch/2025-04-21 13:02 -  
[DIR]2021-05-27-ChIP-data-uniform-processing-final/2025-08-29 16:35 -  
[DIR]2021-05-28-RNA-seq-2021-05-25-RNA-seq-alignment-check/2021-05-29 05:48 -  
[DIR]2021-05-28-RNA-seq-2021-05-25-RNA-seq-reprocess/2021-05-29 06:24 -  
[DIR]2021-06-22-RNA-seq/2021-06-22 20:37 -  
[DIR]2021-07-12-tag-check/2021-07-12 09:13 -  
[DIR]2021-07-13-RNA-seq/2021-07-14 19:06 -  
[DIR]2021-07-13-gDNA/2021-07-14 20:55 -  
[DIR]2021-07-17-ChIP-data-uniform-processing-additional/2025-04-21 13:03 -  
[DIR]2021-11-12-RNA-seq/2021-11-14 10:53 -  
[DIR]2021-11-12-gDNA/2021-11-14 09:58 -  
[DIR]2021-12-22-ChIP-data/2025-04-21 13:04 -  
[DIR]2022-03-28-directRNA-seq/2022-05-10 09:26 -  
[DIR]2022-04-20-RNA-seq/2022-04-24 03:42 -  
[DIR]2022-04-20-SLAM-seq/2022-04-24 03:26 -  
[DIR]2022-04-20-gDNA/2022-04-26 04:58 -  
[DIR]2022-05-23-NextSeq/2022-05-26 09:52 -  
[DIR]2022-05-25-SLAM-seq/2022-05-27 22:26 -  
[DIR]2022-06-19-NextSeq/2022-06-22 08:44 -  
[DIR]2022-06-24-SLAM-seq/2022-06-26 07:39 -  
[DIR]2022-07-09-NextSeq/2022-09-28 05:15 -  
[DIR]2022-08-27-RNA-seq-hg38/2022-08-28 12:05 -  
[DIR]2022-08-27-RNA-seq-sacCer_Candida/2022-08-28 03:36 -  
[DIR]2022-08-27-RNA-seq-sacCer_Spombe/2022-09-19 19:16 -  
[DIR]2022-08-27-gDNA/2022-08-28 02:07 -  
[DIR]2022-09-26-NextSeq/2022-09-28 11:12 -  
[DIR]2022-10-14-RNA-seq/2022-10-14 13:10 -  
[DIR]2022-10-14-SLAM-seq/2022-10-15 11:08 -  
[DIR]2022-10-28-NextSeq-run/2025-04-21 13:01 -  
[DIR]2022-11-16-NextSeq-run/2025-04-21 13:01 -  
[DIR]2022-12-02-NextSeq-run/2025-04-21 13:01 -  
[DIR]2022-12-22-RNA-seq/2022-12-23 10:49 -  
[DIR]2023-03-23-directRNA-seq/2024-01-22 03:18 -  
[DIR]2023-03-30-NextSeq/2023-04-05 12:31 -  
[DIR]2023-04-20-Tn5/2023-04-20 19:53 -  
[DIR]2023-04-23-2022-03-28-directRNA-seq-rerun-test/2024-01-15 22:20 -  
[DIR]2023-05-02-YAC/2023-05-26 02:59 -  
[DIR]2023-05-17-YAC/2025-08-29 16:20 -  
[DIR]2023-05-22-NextSeq/2025-04-21 13:01 -  
[DIR]2023-06-03-NextSeq/2025-04-21 13:01 -  
[DIR]2023-06-06-NextSeq/2025-08-29 21:12 -  
[DIR]2023-06-17-NextSeq/2023-06-20 12:07 -  
[DIR]2023-06-18-RNA-seq-bacteria/2023-07-04 09:17 -  
[DIR]2023-06-18-RNA-seq-human/2023-06-19 00:33 -  
[DIR]2023-07-04-RNA-seq-bacteria-additional/2023-07-04 07:58 -  
[DIR]2023-07-04-RNA-seq-bacteria-rerun/2023-07-04 14:04 -  
[DIR]2023-07-04-RNA-seq-bacteria-rerun2/2023-07-04 21:22 -  
[DIR]2023-07-11-YAC/2023-07-12 15:59 -  
[DIR]2023-09-13-RNA-seq-bacteria/2023-09-26 15:27 -  
[DIR]2023-10-17-2023-03-30-NextSeq-RPKM-recompute/2023-10-18 14:26 -  
[DIR]2024-07-09-DNA/2024-07-10 01:55 -  
[DIR]2024-07-09-RNA/2024-07-10 01:51 -  
[DIR]2024-09-13-DNA-rerun-S.pombe/2024-09-28 15:09 -  
[DIR]2024-09-13-DNA/2024-09-14 22:39 -  
[DIR]2024-09-13-RNA-rerun-S.pombe/2024-09-29 21:14 -  
[DIR]2024-09-13-RNA/2024-09-14 14:19 -  
[DIR]2024-11-28-DNA/2024-11-28 19:36 -  
[DIR]2024-11-28-RNA/2024-11-28 18:46 -  
[DIR]2025-01-14-DNA/2025-01-15 09:49 -  
[DIR]2025-01-14-RNA/2025-01-15 10:25 -  
[DIR]2025-02-23-RNA/2025-02-24 09:55 -  
[DIR]2025-02-24-directRNA-seq/2025-03-06 13:46 -  
[DIR]2025-03-03-directRNA-seq/2025-03-05 14:04 -  
[DIR]2025-03-05-directRNA-seq/2025-03-06 13:57 -  
[DIR]2025-03-27-directRNA-seq/2025-08-29 16:53 -  
[DIR]2025-04-08-directRNA-seq-rerun/2025-04-09 15:51 -  
[DIR]2025-05-12-RNA/2025-05-12 15:36 -  
[DIR]2025-05-15-RNA/2025-05-15 22:15 -  
[DIR]2025-06-20-RNA/2025-06-20 21:34 -  
[DIR]2025-07-29-ChIP/2025-07-31 07:02 -  
[DIR]2025-07-29-DNA/2025-07-30 03:43 -  
[DIR]2025-07-29-RNA/2025-07-29 22:18 -  
[DIR]2025-08-05-PRJNA889550/2025-08-06 11:18 -  
[DIR]2025-08-05-RNA/2025-08-05 19:01 -  
[DIR]2025-08-28-RNA/2025-08-29 08:59 -  
[DIR]2025-09-16-ChIP-fly-human-rerun-trimmed/2025-09-18 07:08 -  
[DIR]2025-09-16-ChIP-fly-human/2025-09-17 15:51 -  
[DIR]2025-09-29-DNA/2025-09-29 15:46 -  
[DIR]2025-09-29-RNA/2025-11-20 23:34 -  
[DIR]2026-01-03-ChIP-fly-human-reprocess/2026-01-14 22:47 -  
[DIR]2026-01-03-ChIP-fly-human/2026-01-08 14:44 -  
[DIR]2026-01-03-RNA-ectopic-sequence-realignment/2026-01-19 07:53 -  
[DIR]2026-01-03-RNA/2026-01-07 12:21 -  
[DIR]2026-01-16-ChIP-fly-human-previous-runs-reprocess/2026-01-19 05:43 -  
[DIR]2026-02-07-DNA/2026-02-13 06:44 -  
[DIR]2026-02-07-RNA-pombe-rerun/2026-02-15 19:37 -  
[DIR]2026-02-07-RNA/2026-02-13 06:53 -  
[DIR]2026-02-14-DNA/2026-02-15 08:33 -  
[DIR]2026-02-14-RNA/2026-02-15 19:52 -  
[DIR]2026-02-25-DNA/2026-02-26 07:13 -  
[DIR]2026-02-25-RNA-Candida_rRNA-reprocessing/2026-03-09 01:53 -  
[DIR]2026-02-25-RNA-rerun/2026-03-13 00:11 -  
[DIR]2026-02-25-RNA/2026-03-07 17:11 -  
[DIR]2026-03-07-old-SMF-tracks/2026-03-08 20:27 -  
[DIR]2026-03-17-DNA-sacCer3_Candida/2026-03-17 23:29 -  
[DIR]2026-03-17-RNA-seq-human/2026-03-23 07:31 -  
[DIR]2026-03-17-RNA-seq-yeast/2026-03-25 06:05 -  
[DIR]2026-03-24-file-check/2026-03-25 19:12 -  
[DIR]2026-04-01-DNA-sacCer3_Candida/2026-04-02 15:58 -  
[DIR]2026-04-01-RNA-seq-yeast/2026-04-02 15:48 -  
[TXT]commands-generate-E.coli.py2023-06-18 17:32 34K 
[TXT]commands-generate.py2025-07-29 19:46 197K 
[DIR]dataset/2026-02-26 07:31 -  
[DIR]datasets-ATAC/2020-11-09 19:19 -  
[DIR]datasets-ChIP/2026-01-07 15:46 -  
[DIR]datasets-RNA/2026-04-02 15:48 -  
[DIR]datasets-SLAM/2022-10-15 11:08 -  
[DIR]datasets-SMF/2026-03-18 01:28 -  
[DIR]datasets-gDNA/2026-04-02 15:58 -  
[DIR]datasets-nanopore/2025-04-01 21:20 -  
[DIR]raw_data/2025-08-29 16:28 -  
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