## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[Idarubicin_800.2x36mers.sacCer3.unique.nochrM.bam] OUTPUT=Idarubicin_800.2x36mers.sacCer3.unique.nochrM.dedup.bam METRICS_FILE=Idarubicin_800.2x36mers.sacCer3.unique.nochrM.dedup.metric REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Thu Jul 22 13:50:07 PDT 2021

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	1996806	0	0	226768	86486	0.113565	12362206

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.041719
2.0	1.928061
3.0	2.6822
4.0	3.323856
5.0	3.869806
6.0	4.334325
7.0	4.729559
8.0	5.065841
9.0	5.351966
10.0	5.595413
11.0	5.80255
12.0	5.978791
13.0	6.128744
14.0	6.256332
15.0	6.364889
16.0	6.457254
17.0	6.535843
18.0	6.60271
19.0	6.659603
20.0	6.70801
21.0	6.749197
22.0	6.784241
23.0	6.814058
24.0	6.839428
25.0	6.861013
26.0	6.879379
27.0	6.895006
28.0	6.908302
29.0	6.919615
30.0	6.92924
31.0	6.93743
32.0	6.944398
33.0	6.950327
34.0	6.955371
35.0	6.959663
36.0	6.963315
37.0	6.966422
38.0	6.969066
39.0	6.971316
40.0	6.973229
41.0	6.974858
42.0	6.976243
43.0	6.977422
44.0	6.978425
45.0	6.979279
46.0	6.980005
47.0	6.980623
48.0	6.981148
49.0	6.981596
50.0	6.981976
51.0	6.9823
52.0	6.982576
53.0	6.98281
54.0	6.983009
55.0	6.983179
56.0	6.983324
57.0	6.983446
58.0	6.983551
59.0	6.98364
60.0	6.983716
61.0	6.98378
62.0	6.983835
63.0	6.983881
64.0	6.983921
65.0	6.983955
66.0	6.983983
67.0	6.984008
68.0	6.984029
69.0	6.984046
70.0	6.984061
71.0	6.984074
72.0	6.984085
73.0	6.984094
74.0	6.984102
75.0	6.984109
76.0	6.984115
77.0	6.98412
78.0	6.984124
79.0	6.984127
80.0	6.98413
81.0	6.984133
82.0	6.984135
83.0	6.984137
84.0	6.984138
85.0	6.98414
86.0	6.984141
87.0	6.984142
88.0	6.984143
89.0	6.984143
90.0	6.984144
91.0	6.984144
92.0	6.984145
93.0	6.984145
94.0	6.984145
95.0	6.984146
96.0	6.984146
97.0	6.984146
98.0	6.984146
99.0	6.984146
100.0	6.984147

