~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.minus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.wig /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.RPM.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_24-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_25-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_26-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_27-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_28-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_29-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig
~/programs/UCSC-utils-2017-07-13/wigToBigWig Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.wig  /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Drosophila_pseudoobscura/Drosophila_pseudoobscura.HGSC2.20.chrom.sizes Dpse_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.unique.counts.plus.5p.bigWig