samtools index Dmel2_01-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_02-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_03-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_04-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_05-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_06-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_07-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_08-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_09-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_10-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_11-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_12-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_13-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_14-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_15-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_16-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_17-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_18-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_19-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_20-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_21-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_22-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_23-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel2_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam