samtools index Dmel01_E01h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel02_E02h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel03_E03h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel04_E04h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel05_E05h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel06_E06h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel07_E07h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel08_E08h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel09_E09h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel10_E10h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel11_E11h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel12_E12h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel13_E13h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel14_E14h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel15_E15h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel16_E16h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel17_E17h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel18_E18h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel19_E19h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel20_E20h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel21_E21h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel22_E22h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel23_E23h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel24_E24h-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel25_L1-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel26_L2-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel27_L3_DG-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel28_L3_LG-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel29_L3_CG-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel30_WPP+1d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel31_WPP+2d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel32_WPP+3d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel33_WPP+4d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel34_WPP+5d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel35_AdM5d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel36_AdF5d-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index Dmel_merged-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam