python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py TURTI-1-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-TURTI-1 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chelicerata/Tetranychus_urticae/Tetranychus_urticae.GCA_000239435.1.20.chrom.sizes  samtools -paired 
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py TURTI-2-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-TURTI-2 -bam /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chelicerata/Tetranychus_urticae/Tetranychus_urticae.GCA_000239435.1.20.chrom.sizes  samtools -paired