python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py hen2-4_pooled-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-hen2-4_pooled -bam /oak/stanford/groups/akundaje/marinovg/genomes/TAIR10/TAIR10.chrom.sizes  samtools -paired 
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py rrp4-2_pooled-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-rrp4-2_pooled -bam /oak/stanford/groups/akundaje/marinovg/genomes/TAIR10/TAIR10.chrom.sizes  samtools -paired 
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py wt_pooled-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-wt_pooled -bam /oak/stanford/groups/akundaje/marinovg/genomes/TAIR10/TAIR10.chrom.sizes  samtools -paired