Index of /kundaje/marinovg/oak/Promoters/2021-01-29-CAGE-RAMPAGE-datasets/17-Arabidopsis_thaliana-CAGE-GSE136356
Name
Last modified
Size
Description
Parent Directory
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SAMstats.files
2025-06-03 05:17
103
SAMstats.sh
2025-06-03 05:17
748
SAMstats.table
2021-02-02 12:15
323
SAMstats.tar.gz
2021-02-02 12:16
425
STAR.sh
2025-06-03 05:17
2.7K
command_generate.config
2021-02-02 11:06
103
countlines.sh
2025-06-03 05:17
184
coverage.files
2025-06-03 05:17
145
coverage.sh
2025-06-03 05:17
1.0K
coverage.table
2021-02-02 12:15
6.6K
coverage.tar.gz
2021-02-02 12:16
3.6K
fastq-lines.tar.gz
2021-01-31 06:14
517
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.2500bp_filter.bed
2025-06-23 20:31
4.5M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed
2025-06-03 21:03
4.5M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitmain
2025-06-23 20:35
3.7M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitmain_nochrM_nochloroplast
2025-06-23 20:48
3.6M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitsecondary
2025-06-23 20:35
760K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitsecondary_nochrM_nochloroplast
2025-06-23 20:48
738K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.2500bp_filter.bed
2025-07-15 00:51
1.0M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed
2025-07-14 23:37
1.0M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_chrI-II-III-V
2025-07-22 21:03
852K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_chrIV-NC
2025-07-22 20:45
160K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitmain
2025-07-15 00:52
870K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitmain_nochrM_nochloroplast
2025-07-15 00:52
843K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitsecondary
2025-07-15 00:52
174K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitsecondary_nochrM_nochloroplast
2025-07-15 00:52
168K
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bed
2025-06-03 23:29
4.3M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bedmain
2025-06-03 23:47
3.8M
hen2-4_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bedsecondary
2025-06-03 23:47
491K
hen2-4_pooled-STAR-2.5.3a/
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makewig.sh
2025-06-03 05:17
24K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.2500bp_filter.bed
2025-06-23 20:31
5.1M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed
2025-06-03 21:07
5.1M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitmain
2025-06-23 20:35
4.3M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitmain_nochrM_nochloroplast
2025-06-24 03:44
4.1M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitsecondary
2025-06-23 20:35
877K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitsecondary_nochrM_nochloroplast
2025-06-24 03:44
848K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.2500bp_filter.bed
2025-07-15 00:51
1.1M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed
2025-07-14 23:37
1.1M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_chrI-II-III-V
2025-07-22 21:03
897K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_chrIV-NC
2025-07-22 20:45
164K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitmain
2025-07-15 00:52
915K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitmain_nochrM_nochloroplast
2025-07-15 00:52
884K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitsecondary
2025-07-15 00:52
183K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitsecondary_nochrM_nochloroplast
2025-07-15 00:52
177K
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bed
2025-06-03 23:29
5.0M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bedmain
2025-06-03 23:47
4.4M
rrp4-2_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bedsecondary
2025-06-03 23:47
565K
rrp4-2_pooled-STAR-2.5.3a/
2025-06-03 23:29
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sam_reads_in_genes.files
2025-06-03 05:17
145
sam_reads_in_genes.sh
2025-06-03 05:17
1.1K
sam_reads_in_genes.table
2021-02-02 12:15
207
sam_reads_in_genes.tar.gz
2021-02-02 12:16
369
samtools-index.sh
2025-06-03 05:17
245
wget.sh
2021-01-30 08:15
1.1K
wigToBigWig.sh
2025-06-03 05:17
20K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.2500bp_filter.bed
2025-06-23 20:31
3.4M
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed
2025-06-03 21:02
3.4M
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitmain
2025-06-23 20:35
2.8M
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitmain_nochrM_nochloroplast
2025-06-24 03:44
2.7M
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitsecondary
2025-06-23 20:35
576K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.bed_splitsecondary_nochrM_nochloroplast
2025-06-24 03:44
556K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.2500bp_filter.bed
2025-07-15 00:51
916K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed
2025-07-14 23:37
917K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_chrI-II-III-V
2025-07-22 21:03
746K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_chrIV-NC
2025-07-22 20:45
140K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitmain
2025-07-15 00:52
763K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitmain_nochrM_nochloroplast
2025-07-15 00:52
738K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitsecondary
2025-07-15 00:52
153K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.min2RPM.bed_splitsecondary_nochrM_nochloroplast
2025-07-15 00:52
148K
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bed
2025-06-03 23:29
3.3M
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bedmain
2025-06-03 23:47
2.9M
wt_pooled-STAR-2.5.3a.RAMPAGE-clusters-V2.nochrM-chrC.bedsecondary
2025-06-03 23:47
370K
wt_pooled-STAR-2.5.3a/
2025-06-03 23:29
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z
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