python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Ctrl_pooled-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-Ctrl_pooled -bam /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_luchuensis-AspL_2604/GCA_001602395.1_AspL_2604_genomic.chrom.sizes  samtools -paired 
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py sirD_pooled-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam  SAMstats-sirD_pooled -bam /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_luchuensis-AspL_2604/GCA_001602395.1_AspL_2604_genomic.chrom.sizes  samtools -paired