samtools index WT_12hpf-GSM3141415-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index WT_12hpf_2-GSM4144776-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index WT_16hpf-GSM3141416-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index WT_16hpf_2-GSM4144777-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index sa37_12hpf-GSM3141417-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index sa37_12hpf_2-GSM4144778-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index sa37_16hpf-GSM3141418-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam
samtools index sa37_16hpf_2-GSM4144779-STAR-2.5.3a/STAR-2.5.3a-Aligned.sortedByCoord.out.bam