#seq1	Length	seq2	Length	Similarity_AB	Similarity_BA	Similarity_max
nadh4|P.biaurelia-Sample_379	517	nadh4|P.caudatum-Sample_C083	518	0.78916827853	0.787644787645	0.78916827853
nadh4|P.biaurelia-Sample_379	517	nadh4|P.multimicronucleatum-Sample_M04	536	0.762088974855	0.735074626866	0.762088974855
nadh4|P.biaurelia-Sample_379	517	nadh4|P.octaurelia-Sample_1038	517	0.914893617021	0.914893617021	0.914893617021
nadh4|P.biaurelia-Sample_379	517	nadh4|P.sexaurelia-Sample_130	517	0.8916827853	0.8916827853	0.8916827853
nadh4|P.biaurelia-Sample_379	517	nadh4|P.tetraurelia-Sample_291	534	0.750483558994	0.7265917603	0.750483558994
nadh4|P.biaurelia-Sample_379	517	nadh4|Sample_C026	512	0.781431334623	0.7890625	0.7890625
nadh4|P.biaurelia-Sample_379	517	nadh4|Sample_M13	607	0.746615087041	0.635914332784	0.746615087041
nadh4|P.biaurelia-Sample_379	517	nadh4|Sample_Peniche3I	512	0.742746615087	0.75	0.75
nadh4|P.caudatum-Sample_C083	518	nadh4|P.multimicronucleatum-Sample_M04	536	0.750965250965	0.725746268657	0.750965250965
nadh4|P.caudatum-Sample_C083	518	nadh4|P.octaurelia-Sample_1038	517	0.799227799228	0.800773694391	0.800773694391
nadh4|P.caudatum-Sample_C083	518	nadh4|P.sexaurelia-Sample_130	517	0.810810810811	0.812379110251	0.812379110251
nadh4|P.caudatum-Sample_C083	518	nadh4|P.tetraurelia-Sample_291	534	0.681467181467	0.661048689139	0.681467181467
nadh4|P.caudatum-Sample_C083	518	nadh4|Sample_C026	512	0.96138996139	0.97265625	0.97265625
nadh4|P.caudatum-Sample_C083	518	nadh4|Sample_M13	607	0.745173745174	0.635914332784	0.745173745174
nadh4|P.caudatum-Sample_C083	518	nadh4|Sample_Peniche3I	512	0.739382239382	0.748046875	0.748046875
nadh4|P.multimicronucleatum-Sample_M04	536	nadh4|P.octaurelia-Sample_1038	517	0.733208955224	0.760154738878	0.760154738878
nadh4|P.multimicronucleatum-Sample_M04	536	nadh4|P.sexaurelia-Sample_130	517	0.740671641791	0.767891682785	0.767891682785
nadh4|P.multimicronucleatum-Sample_M04	536	nadh4|P.tetraurelia-Sample_291	534	0.652985074627	0.65543071161	0.65543071161
nadh4|P.multimicronucleatum-Sample_M04	536	nadh4|Sample_C026	512	0.720149253731	0.75390625	0.75390625
nadh4|P.multimicronucleatum-Sample_M04	536	nadh4|Sample_M13	607	0.888059701493	0.784184514003	0.888059701493
nadh4|P.multimicronucleatum-Sample_M04	536	nadh4|Sample_Peniche3I	512	0.871268656716	0.912109375	0.912109375
nadh4|P.octaurelia-Sample_1038	517	nadh4|P.sexaurelia-Sample_130	517	0.893617021277	0.893617021277	0.893617021277
nadh4|P.octaurelia-Sample_1038	517	nadh4|P.tetraurelia-Sample_291	534	0.773694390716	0.749063670412	0.773694390716
nadh4|P.octaurelia-Sample_1038	517	nadh4|Sample_C026	512	0.79497098646	0.802734375	0.802734375
nadh4|P.octaurelia-Sample_1038	517	nadh4|Sample_M13	607	0.748549323017	0.637561779242	0.748549323017
nadh4|P.octaurelia-Sample_1038	517	nadh4|Sample_Peniche3I	512	0.750483558994	0.7578125	0.7578125
nadh4|P.sexaurelia-Sample_130	517	nadh4|P.tetraurelia-Sample_291	534	0.746615087041	0.722846441948	0.746615087041
nadh4|P.sexaurelia-Sample_130	517	nadh4|Sample_C026	512	0.810444874275	0.818359375	0.818359375
nadh4|P.sexaurelia-Sample_130	517	nadh4|Sample_M13	607	0.752417794971	0.640856672158	0.752417794971
nadh4|P.sexaurelia-Sample_130	517	nadh4|Sample_Peniche3I	512	0.744680851064	0.751953125	0.751953125
nadh4|P.tetraurelia-Sample_291	534	nadh4|Sample_C026	512	0.661048689139	0.689453125	0.689453125
nadh4|P.tetraurelia-Sample_291	534	nadh4|Sample_M13	607	0.649812734082	0.571663920923	0.649812734082
nadh4|P.tetraurelia-Sample_291	534	nadh4|Sample_Peniche3I	512	0.642322097378	0.669921875	0.669921875
nadh4|Sample_C026	512	nadh4|Sample_M13	607	0.74609375	0.629324546952	0.74609375
nadh4|Sample_C026	512	nadh4|Sample_Peniche3I	512	0.74609375	0.74609375	0.74609375
nadh4|Sample_M13	607	nadh4|Sample_Peniche3I	512	0.823723228995	0.9765625	0.9765625