#seq1	Length	seq2	Length	Similarity_AB	Similarity_BA	Similarity_max
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|P.caudatum-Sample_C083	323	0.826219512195	0.839009287926	0.839009287926
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|P.multimicronucleatum-Sample_M04	325	0.798780487805	0.806153846154	0.806153846154
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|P.octaurelia-Sample_1038	345	0.896341463415	0.852173913043	0.896341463415
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|P.sexaurelia-Sample_130	339	0.890243902439	0.861356932153	0.890243902439
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|P.tetraurelia-Sample_291	336	0.884146341463	0.863095238095	0.884146341463
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|Sample_C026	336	0.823170731707	0.803571428571	0.823170731707
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|Sample_M13	338	0.817073170732	0.792899408284	0.817073170732
nadh1_a|P.biaurelia-Sample_379	328	nadh1_a|Sample_Peniche3I	327	0.810975609756	0.813455657492	0.813455657492
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|P.multimicronucleatum-Sample_M04	325	0.811145510836	0.806153846154	0.811145510836
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|P.octaurelia-Sample_1038	345	0.835913312693	0.782608695652	0.835913312693
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|P.sexaurelia-Sample_130	339	0.857585139319	0.817109144543	0.857585139319
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|P.tetraurelia-Sample_291	336	0.826625386997	0.794642857143	0.826625386997
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|Sample_C026	336	0.950464396285	0.91369047619	0.950464396285
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|Sample_M13	338	0.814241486068	0.778106508876	0.814241486068
nadh1_a|P.caudatum-Sample_C083	323	nadh1_a|Sample_Peniche3I	327	0.814241486068	0.804281345566	0.814241486068
nadh1_a|P.multimicronucleatum-Sample_M04	325	nadh1_a|P.octaurelia-Sample_1038	345	0.803076923077	0.75652173913	0.803076923077
nadh1_a|P.multimicronucleatum-Sample_M04	325	nadh1_a|P.sexaurelia-Sample_130	339	0.812307692308	0.778761061947	0.812307692308
nadh1_a|P.multimicronucleatum-Sample_M04	325	nadh1_a|P.tetraurelia-Sample_291	336	0.793846153846	0.767857142857	0.793846153846
nadh1_a|P.multimicronucleatum-Sample_M04	325	nadh1_a|Sample_C026	336	0.809230769231	0.782738095238	0.809230769231
nadh1_a|P.multimicronucleatum-Sample_M04	325	nadh1_a|Sample_M13	338	0.932307692308	0.896449704142	0.932307692308
nadh1_a|P.multimicronucleatum-Sample_M04	325	nadh1_a|Sample_Peniche3I	327	0.929230769231	0.923547400612	0.929230769231
nadh1_a|P.octaurelia-Sample_1038	345	nadh1_a|P.sexaurelia-Sample_130	339	0.857971014493	0.873156342183	0.873156342183
nadh1_a|P.octaurelia-Sample_1038	345	nadh1_a|P.tetraurelia-Sample_291	336	0.849275362319	0.872023809524	0.872023809524
nadh1_a|P.octaurelia-Sample_1038	345	nadh1_a|Sample_C026	336	0.797101449275	0.818452380952	0.818452380952
nadh1_a|P.octaurelia-Sample_1038	345	nadh1_a|Sample_M13	338	0.765217391304	0.781065088757	0.781065088757
nadh1_a|P.octaurelia-Sample_1038	345	nadh1_a|Sample_Peniche3I	327	0.765217391304	0.807339449541	0.807339449541
nadh1_a|P.sexaurelia-Sample_130	339	nadh1_a|P.tetraurelia-Sample_291	336	0.83185840708	0.839285714286	0.839285714286
nadh1_a|P.sexaurelia-Sample_130	339	nadh1_a|Sample_C026	336	0.823008849558	0.830357142857	0.830357142857
nadh1_a|P.sexaurelia-Sample_130	339	nadh1_a|Sample_M13	338	0.790560471976	0.792899408284	0.792899408284
nadh1_a|P.sexaurelia-Sample_130	339	nadh1_a|Sample_Peniche3I	327	0.787610619469	0.816513761468	0.816513761468
nadh1_a|P.tetraurelia-Sample_291	336	nadh1_a|Sample_C026	336	0.791666666667	0.791666666667	0.791666666667
nadh1_a|P.tetraurelia-Sample_291	336	nadh1_a|Sample_M13	338	0.78869047619	0.784023668639	0.78869047619
nadh1_a|P.tetraurelia-Sample_291	336	nadh1_a|Sample_Peniche3I	327	0.785714285714	0.807339449541	0.807339449541
nadh1_a|Sample_C026	336	nadh1_a|Sample_M13	338	0.782738095238	0.778106508876	0.782738095238
nadh1_a|Sample_C026	336	nadh1_a|Sample_Peniche3I	327	0.785714285714	0.807339449541	0.807339449541
nadh1_a|Sample_M13	338	nadh1_a|Sample_Peniche3I	327	0.949704142012	0.981651376147	0.981651376147