#seq1	Length	seq2	Length	Similarity_AB	Similarity_BA	Similarity_max
Ymf65|P.biaurelia-Sample_379	365	Ymf65|P.caudatum-Sample_C083	397	0.676712328767	0.622166246851	0.676712328767
Ymf65|P.biaurelia-Sample_379	365	Ymf65|P.multimicronucleatum-Sample_M04	370	0.597260273973	0.589189189189	0.597260273973
Ymf65|P.biaurelia-Sample_379	365	Ymf65|P.octaurelia-Sample_1038	422	0.87397260274	0.755924170616	0.87397260274
Ymf65|P.biaurelia-Sample_379	365	Ymf65|P.sexaurelia-Sample_130	365	0.854794520548	0.854794520548	0.854794520548
Ymf65|P.biaurelia-Sample_379	365	Ymf65|Sample_C026	371	0.679452054795	0.66846361186	0.679452054795
Ymf65|P.biaurelia-Sample_379	365	Ymf65|Sample_M13	374	0.594520547945	0.580213903743	0.594520547945
Ymf65|P.biaurelia-Sample_379	365	Ymf65|Sample_Peniche3I	365	0.61095890411	0.61095890411	0.61095890411
Ymf65|P.caudatum-Sample_C083	397	Ymf65|P.multimicronucleatum-Sample_M04	370	0.589420654912	0.632432432432	0.632432432432
Ymf65|P.caudatum-Sample_C083	397	Ymf65|P.octaurelia-Sample_1038	422	0.619647355164	0.582938388626	0.619647355164
Ymf65|P.caudatum-Sample_C083	397	Ymf65|P.sexaurelia-Sample_130	365	0.627204030227	0.682191780822	0.682191780822
Ymf65|P.caudatum-Sample_C083	397	Ymf65|Sample_C026	371	0.869017632242	0.929919137466	0.929919137466
Ymf65|P.caudatum-Sample_C083	397	Ymf65|Sample_M13	374	0.594458438287	0.631016042781	0.631016042781
Ymf65|P.caudatum-Sample_C083	397	Ymf65|Sample_Peniche3I	365	0.609571788413	0.66301369863	0.66301369863
Ymf65|P.multimicronucleatum-Sample_M04	370	Ymf65|P.octaurelia-Sample_1038	422	0.586486486486	0.514218009479	0.586486486486
Ymf65|P.multimicronucleatum-Sample_M04	370	Ymf65|P.sexaurelia-Sample_130	365	0.591891891892	0.6	0.6
Ymf65|P.multimicronucleatum-Sample_M04	370	Ymf65|Sample_C026	371	0.62972972973	0.628032345013	0.62972972973
Ymf65|P.multimicronucleatum-Sample_M04	370	Ymf65|Sample_M13	374	0.762162162162	0.754010695187	0.762162162162
Ymf65|P.multimicronucleatum-Sample_M04	370	Ymf65|Sample_Peniche3I	365	0.759459459459	0.769863013699	0.769863013699
Ymf65|P.octaurelia-Sample_1038	422	Ymf65|P.sexaurelia-Sample_130	365	0.720379146919	0.832876712329	0.832876712329
Ymf65|P.octaurelia-Sample_1038	422	Ymf65|Sample_C026	371	0.582938388626	0.66307277628	0.66307277628
Ymf65|P.octaurelia-Sample_1038	422	Ymf65|Sample_M13	374	0.509478672986	0.57486631016	0.57486631016
Ymf65|P.octaurelia-Sample_1038	422	Ymf65|Sample_Peniche3I	365	0.516587677725	0.597260273973	0.597260273973
Ymf65|P.sexaurelia-Sample_130	365	Ymf65|Sample_C026	371	0.687671232877	0.676549865229	0.687671232877
Ymf65|P.sexaurelia-Sample_130	365	Ymf65|Sample_M13	374	0.597260273973	0.582887700535	0.597260273973
Ymf65|P.sexaurelia-Sample_130	365	Ymf65|Sample_Peniche3I	365	0.605479452055	0.605479452055	0.605479452055
Ymf65|Sample_C026	371	Ymf65|Sample_M13	374	0.638814016173	0.633689839572	0.638814016173
Ymf65|Sample_C026	371	Ymf65|Sample_Peniche3I	365	0.660377358491	0.671232876712	0.671232876712
Ymf65|Sample_M13	374	Ymf65|Sample_Peniche3I	365	0.893048128342	0.915068493151	0.915068493151