ORF2	gi|8928619|ref|NP_059424.1-haem_lyase-Paramecium_aurelia	55.93	236	104	0	1	236	10	245	2e-77	  237
ORF2	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	56.01	316	134	3	89	404	98	408	1e-57	  191
ORF2	gi|8928618|ref|NP_059423.1-orf117-Paramecium_aurelia	44.09	93	52	0	273	365	1	93	1e-07	42.4
ORF3	gi|8928617|ref|NP_059422.1-ribosomal_protein_L16-Paramecium_aurelia	73.68	152	40	0	3	154	1	152	2e-79	  229
ORF3	gi|299830289|ref|YP_003734453.1-ribosomal_protein_L16-Paramecium_caudatum	68.67	166	52	0	3	168	1	166	9e-72	  210
ORF4	gi|8928616|ref|NP_059421.1-orf124-Paramecium_aurelia	43.10	116	58	2	3	116	9	118	3e-21	76.6
ORF4	gi|299830288|ref|YP_003734452.1-Ymf59-Paramecium_caudatum	40.68	118	65	2	1	116	7	121	1e-16	64.7
ORF5	gi|8928615|ref|NP_059420.1-orf66-Paramecium_aurelia	47.46	59	31	0	1	59	4	62	7e-16	59.3
ORF5	gi|299830287|ref|YP_003734451.1-Ymf78-Paramecium_caudatum	47.37	57	30	0	1	57	4	60	3e-14	55.1
ORF6	gi|299830286|ref|YP_003734450.1-Ymf65-Paramecium_caudatum	66.21	364	123	0	1	364	1	364	6e-83	  253
ORF6	gi|8928614|ref|NP_059419.1-orf196-Paramecium_aurelia	52.22	180	86	0	21	200	17	196	1e-44	  147
ORF6	gi|8928613|ref|NP_059418.1-orf156-Paramecium_aurelia	67.97	153	49	0	210	362	1	153	3e-37	  126
ORF7	gi|299830285|ref|YP_003734449.1-NADH_dehydrogenase_subunit_1_b-Paramecium_caudatum	86.27	51	7	0	1	51	1	51	6e-29	93.2
ORF7	gi|8928612|ref|NP_059417.1-NADH_dehydrogenase_subunit_1_b-Paramecium_aurelia	67.86	56	16	2	8	62	18	72	2e-20	71.6
ORF8	gi|299830283|ref|YP_003734447.1-Ymf63-Paramecium_caudatum	51.96	179	86	0	361	539	347	525	7e-42	  150
ORF8	gi|8928611|ref|NP_059416.1-orf314-Paramecium_aurelia	46.11	167	90	0	372	538	148	314	1e-37	  134
ORF9	gi|299830282|ref|YP_003734446.1-ATP_synthase_F0_subunit_9-Paramecium_caudatum	96.00	75	3	0	1	75	1	75	4e-48	  142
ORF9	gi|8928610|ref|NP_059415.1-ATP_synthase_F0_subunit_9-Paramecium_aurelia	96.00	75	3	0	1	75	1	75	4e-48	  142
ORF10	gi|8928609|ref|NP_059414.1-orf168-Paramecium_aurelia	51.30	154	75	0	1	154	1	154	1e-53	  164
ORF10	gi|299830281|ref|YP_003734445.1-Ymf83-Paramecium_caudatum	51.81	166	80	0	1	166	1	166	4e-49	  152
ORF11	gi|8928607|ref|NP_059412.1-orf234-Paramecium_aurelia	53.23	201	93	1	663	863	35	234	7e-57	  188
ORF11	gi|299830280|ref|YP_003734444.1-Ymf64-Paramecium_caudatum	52.59	232	97	5	637	863	1489	1712	2e-40	  153
ORF17	gi|8928602|ref|NP_059407.1-NADH_dehydrogenase_subunit_2-Paramecium_aurelia	66.42	134	45	0	37	170	33	166	2e-20	77.0
ORF17	gi|299830275|ref|YP_003734439.1-NADH_dehydrogenase_subunit_2-Paramecium_caudatum	62.50	128	47	1	8	135	6	132	6e-16	64.3
ORF18	gi|8928601|ref|NP_059406.1-ribosomal_protein_S12-Paramecium_aurelia	82.61	138	24	0	7	144	1	138	5e-78	  224
ORF18	gi|299830274|ref|YP_003734438.1-ribosomal_protein_S12-Paramecium_caudatum	85.61	139	20	0	6	144	1	139	8e-78	  223
ORF19	gi|299830273|ref|YP_003734437.1-NADH_dehydrogenase_subunit_10-Paramecium_caudatum	97.16	141	4	0	1	141	14	154	1e-104	  292
ORF19	gi|8928600|ref|NP_059405.1-NADH_dehydrogenase_subunit_10-Paramecium_aurelia	95.74	141	6	0	1	141	14	154	3e-102	  286
ORF20	gi|299830272|ref|YP_003734436.1-Ymf84-Paramecium_caudatum	35.53	152	94	2	19	168	5	154	2e-16	65.5
ORF20	gi|8928599|ref|NP_059404.1-orf178_2-Paramecium_aurelia	25.00	176	132	0	9	184	2	177	7e-09	45.1
ORF21	gi|8928598|ref|NP_059403.1-ribosomal_protein_L2-Paramecium_aurelia	64.03	253	91	0	1	253	4	256	5e-120	  340
ORF21	gi|299830271|ref|YP_003734435.1-ribosomal_protein_L12-Paramecium_caudatum	62.45	261	98	0	2	262	5	265	9e-116	  330
ORF22	gi|299830270|ref|YP_003734434.1-ribosomal_protein_S19-Paramecium_caudatum	50.79	63	31	0	6	68	26	88	1e-16	62.0
ORF23	gi|299830269|ref|YP_003734433.1-ribosomal_protein_S3-Paramecium_caudatum	52.03	123	59	0	4	126	1	123	2e-41	  137
ORF23	gi|8928597|ref|NP_059402.1-ribosomal_protein_S3-Paramecium_aurelia	51.89	106	51	0	4	109	1	106	1e-40	  130
ORF25	gi|8928596|ref|NP_059401.1-ribosomal_protein_S13-Paramecium_aurelia	69.96	233	70	0	1	233	12	244	1e-110	  316
ORF25	gi|299830268|ref|YP_003734432.1-ribosomal_protein_S13-Paramecium_caudatum	66.52	233	78	0	1	233	12	244	1e-109	  314
ORF26	gi|299830267|ref|YP_003734431.1-Ymf76-Paramecium_caudatum	44.55	202	110	2	185	385	199	399	3e-26	  100
ORF26	gi|8928595|ref|NP_059400.1-orf312-Paramecium_aurelia	44.21	95	53	0	183	277	218	312	2e-22	88.6
ORF26	gi|8928594|ref|NP_059399.1-orf105-Paramecium_aurelia	36.36	77	49	0	285	361	2	78	2e-11	53.5
ORF27	gi|299830266|ref|YP_003734430.1-apocytochrome_b-Paramecium_caudatum	87.47	439	55	0	3	441	1	439	0.0	  787
ORF27	gi|8928593|ref|NP_059398.1-apocytochrome_b-Paramecium_aurelia	85.82	416	59	0	3	418	1	416	0.0	  715
ORF28	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	75.09	554	135	1	71	621	40	593	0.0	  796
ORF28	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	71.94	556	153	1	57	609	2	557	0.0	  783
ORF29	gi|8928591|ref|NP_059396.1-cytochrome_c_oxidase_subunit_2-Paramecium_aurelia	82.91	550	94	0	1	550	27	576	0.0	  910
ORF29	gi|299830264|ref|YP_003734428.1-cytochrome_c_oxidase_subunit_2-Paramecium_caudatum	81.85	551	99	1	1	550	27	577	0.0	  899
ORF33	gi|8928590|ref|NP_059395.1-orf78-Paramecium_aurelia	59.46	74	30	0	34	107	5	78	1e-15	60.5
ORF33	gi|299830263|ref|YP_003734427.1-Ymf56-Paramecium_caudatum	60.87	69	27	0	36	104	10	78	1e-13	55.1
ORF34	gi|299830262|ref|YP_003734426.1-Ymf67-Paramecium_caudatum	55.52	353	157	0	1	353	1	353	2e-111	  325
ORF34	gi|8928589|ref|NP_059394.1-orf265_1-Paramecium_aurelia	50.69	217	107	0	1	217	1	217	3e-69	  214
ORF34	gi|8928588|ref|NP_059393.1-orf90-Paramecium_aurelia	87.04	54	7	0	266	319	2	55	8e-30	  103
ORF35	gi|8928587|ref|NP_059392.1-orf393-Paramecium_aurelia	77.52	387	87	0	1	387	7	393	0.0	  515
ORF35	gi|299830261|ref|YP_003734425.1-Ymf68-Paramecium_caudatum	82.25	276	49	0	106	381	113	388	9e-160	  451
ORF37	gi|299830260|ref|YP_003734424.1-cytochrome_c_oxidase_subunit_1-Paramecium_caudatum	91.56	699	59	0	4	702	42	740	0.0	 1273
ORF37	gi|8928586|ref|NP_059391.1-cytochrome_c_oxidase_subunit_1-Paramecium_aurelia	90.61	703	65	1	7	709	35	736	0.0	 1266
ORF38	gi|8928585|ref|NP_059390.1-NADH_dehydrogenase_subunit_1_a-Paramecium_aurelia	92.34	274	21	0	53	326	2	275	3e-169	  468
ORF38	gi|299830259|ref|YP_003734423.1-NADH_dehydrogenase_subunit_1_a-Paramecium_caudatum	89.82	275	28	0	46	320	3	277	1e-168	  468
ORF39	gi|8928584|ref|NP_059389.1-orf265_2-Paramecium_aurelia	69.66	234	71	0	1	234	8	241	3e-78	  233
ORF39	gi|299830258|ref|YP_003734422.1-NADH_dehydrogenase_subunit_6-Paramecium_caudatum	69.17	240	74	0	1	240	8	247	9e-68	  206
ORF40	gi|8928583|ref|NP_059388.1-ribosomal_protein_L14-Paramecium_aurelia	79.83	119	24	0	7	125	1	119	5e-70	  202
ORF40	gi|299830257|ref|YP_003734421.1-ribosomal_protein_L14-Paramecium_caudatum	77.31	119	27	0	7	125	1	119	1e-62	  183
ORF41	gi|8928582|ref|NP_059387.1-orf89-Paramecium_aurelia	73.97	73	19	0	1	73	1	73	4e-33	  105
ORF41	gi|299830256|ref|YP_003734420.1-Ymf80-Paramecium_caudatum	76.56	64	15	0	1	64	1	64	2e-31	  101
ORF43	gi|8928581|ref|NP_059386.1-NADH_dehydrogenase_subunit_4-Paramecium_aurelia	67.53	502	163	0	11	512	11	512	0.0	  688
ORF43	gi|299830255|ref|YP_003734419.1-NADH_dehydrogenase_subunit_4-Paramecium_caudatum	73.85	501	130	1	1	500	1	501	0.0	  630
ORF43	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	23.57	314	212	9	132	425	89	394	1e-08	48.5
ORF43	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	24.30	321	201	12	132	425	113	418	1e-07	45.8
ORF44	gi|8928580|ref|NP_059385.1-orf100-Paramecium_aurelia	73.68	76	20	0	1	76	1	76	8e-34	  108
ORF44	gi|299830254|ref|YP_003734418.1-Ymf57-Paramecium_caudatum	76.39	72	17	0	1	72	1	72	7e-31	  100
ORF47	gi|299830253|ref|YP_003734417.1-Ymf66-Paramecium_caudatum	74.45	407	100	1	8	414	7	409	0.0	  526
ORF47	gi|8928578|ref|NP_059383.1-orf221-Paramecium_aurelia	87.23	141	18	0	287	427	80	220	1e-88	  265
ORF47	gi|8928579|ref|NP_059384.1-orf189_1-Paramecium_aurelia	63.76	149	54	0	37	185	35	183	6e-57	  181
ORF62	gi|8928606|ref|NP_059411.1-orf178_1-Paramecium_aurelia	65.17	178	62	0	4	181	1	178	4e-61	  184
ORF62	gi|299830279|ref|YP_003734443.1-ribosomal_protein_L6-Paramecium_caudatum	70.79	178	52	0	4	181	1	178	5e-56	  171
ORF63	gi|8928605|ref|NP_059410.1-orf70-Paramecium_aurelia	48.48	66	34	0	33	98	1	66	1e-13	54.7
ORF63	gi|299830278|ref|YP_003734442.1-Ymf79-Paramecium_caudatum	49.25	67	34	0	33	99	1	67	1e-11	49.3
ORF64	gi|8928604|ref|NP_059409.1-ribosomal_protein_S14-Paramecium_aurelia	64.71	102	36	0	2	103	1	102	7e-48	  144
ORF64	gi|299830277|ref|YP_003734441.1-ribosomal_protein_S14-Paramecium_caudatum	74.51	102	26	0	2	103	1	102	1e-42	  131
ORF65	gi|8928603|ref|NP_059408.1-NADH_dehydrogenase_subunit_7-Paramecium_aurelia	90.28	422	41	0	2	423	1	422	0.0	  822
ORF65	gi|299830276|ref|YP_003734440.1-NADH_dehydrogenase_subunit_7-Paramecium_caudatum	89.83	423	42	1	2	423	1	423	0.0	  798