ORF35	gi|299830253|ref|YP_003734417.1-Ymf66-Paramecium_caudatum	98.53	407	6	0	1	407	4	410	0.0	  777
ORF35	gi|8928578|ref|NP_059383.1-orf221-Paramecium_aurelia	85.11	141	21	0	279	419	80	220	1e-81	  246
ORF35	gi|8928579|ref|NP_059384.1-orf189_1-Paramecium_aurelia	71.43	133	38	0	27	159	33	165	7e-63	  196
ORF39	gi|299830254|ref|YP_003734418.1-Ymf57-Paramecium_caudatum	98.61	72	1	0	1	72	1	72	3e-41	  127
ORF39	gi|8928580|ref|NP_059385.1-orf100-Paramecium_aurelia	77.63	76	17	0	1	76	1	76	8e-34	  108
ORF40	gi|299830255|ref|YP_003734419.1-NADH_dehydrogenase_subunit_4-Paramecium_caudatum	99.00	501	4	1	1	500	1	501	0.0	  932
ORF40	gi|8928581|ref|NP_059386.1-NADH_dehydrogenase_subunit_4-Paramecium_aurelia	69.68	498	151	0	15	512	15	512	0.0	  697
ORF40	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	24.39	410	258	12	83	449	14	414	4e-07	43.9
ORF40	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	23.26	288	185	9	161	425	144	418	2e-06	41.2
ORF42	gi|299830256|ref|YP_003734420.1-Ymf80-Paramecium_caudatum	100.00	89	0	0	2	90	1	89	8e-56	  164
ORF42	gi|8928582|ref|NP_059387.1-orf89-Paramecium_aurelia	68.00	75	24	0	2	76	1	75	6e-33	  105
ORF43	gi|299830257|ref|YP_003734421.1-ribosomal_protein_L14-Paramecium_caudatum	100.00	119	0	0	1	119	1	119	2e-84	  238
ORF43	gi|8928583|ref|NP_059388.1-ribosomal_protein_L14-Paramecium_aurelia	75.63	119	29	0	1	119	1	119	4e-68	  197
ORF44	gi|299830258|ref|YP_003734422.1-NADH_dehydrogenase_subunit_6-Paramecium_caudatum	98.83	256	3	0	1	256	1	256	2e-168	  463
ORF44	gi|8928584|ref|NP_059389.1-orf265_2-Paramecium_aurelia	73.14	242	65	0	1	242	1	242	8e-90	  263
ORF46	gi|299830259|ref|YP_003734423.1-NADH_dehydrogenase_subunit_1_a-Paramecium_caudatum	98.92	278	3	0	40	317	1	278	0.0	  534
ORF46	gi|8928585|ref|NP_059390.1-NADH_dehydrogenase_subunit_1_a-Paramecium_aurelia	93.77	273	17	0	49	321	2	274	9e-173	  477
ORF48	gi|299830260|ref|YP_003734424.1-cytochrome_c_oxidase_subunit_1-Paramecium_caudatum	99.46	747	2	1	11	757	1	745	0.0	 1503
ORF48	gi|8928586|ref|NP_059391.1-cytochrome_c_oxidase_subunit_1-Paramecium_aurelia	90.26	719	68	2	39	757	20	736	0.0	 1282
ORF50	gi|299830261|ref|YP_003734425.1-Ymf68-Paramecium_caudatum	97.44	390	9	1	1	389	6	395	0.0	  710
ORF50	gi|8928587|ref|NP_059392.1-orf393-Paramecium_aurelia	78.76	386	82	0	1	386	6	391	0.0	  520
ORF51	gi|299830262|ref|YP_003734426.1-Ymf67-Paramecium_caudatum	91.63	263	22	0	13	275	92	354	3e-147	  414
ORF51	gi|8928588|ref|NP_059393.1-orf90-Paramecium_aurelia	82.02	89	16	0	187	275	2	90	7e-33	  110
ORF51	gi|8928589|ref|NP_059394.1-orf265_1-Paramecium_aurelia	38.14	97	60	0	41	137	120	216	2e-16	68.9
ORF52	gi|299830262|ref|YP_003734426.1-Ymf67-Paramecium_caudatum	100.00	122	0	0	1	122	1	122	5e-75	  224
ORF52	gi|8928589|ref|NP_059394.1-orf265_1-Paramecium_aurelia	58.20	122	51	0	1	122	1	122	7e-43	  138
ORF53	gi|299830263|ref|YP_003734427.1-Ymf56-Paramecium_caudatum	98.77	81	1	0	26	106	1	81	4e-48	  144
ORF53	gi|8928590|ref|NP_059395.1-orf78-Paramecium_aurelia	72.60	73	20	0	34	106	6	78	5e-21	74.7
ORF55	gi|299830264|ref|YP_003734428.1-cytochrome_c_oxidase_subunit_2-Paramecium_caudatum	98.96	577	5	1	9	584	1	577	0.0	 1155
ORF55	gi|8928591|ref|NP_059396.1-cytochrome_c_oxidase_subunit_2-Paramecium_aurelia	84.72	576	88	0	9	584	1	576	0.0	  983
ORF56	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	98.99	597	6	0	45	641	1	597	0.0	 1139
ORF56	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	74.69	557	141	0	70	626	2	558	0.0	  821
ORF56	gi|299830255|ref|YP_003734419.1-NADH_dehydrogenase_subunit_4-Paramecium_caudatum	23.15	203	139	4	188	387	161	349	8e-06	40.0
ORF57	gi|299830266|ref|YP_003734430.1-apocytochrome_b-Paramecium_caudatum	99.77	442	1	0	16	457	1	442	0.0	  894
ORF57	gi|8928593|ref|NP_059398.1-apocytochrome_b-Paramecium_aurelia	91.35	416	36	0	16	431	1	416	0.0	  759
ORF59	gi|299830267|ref|YP_003734431.1-Ymf76-Paramecium_caudatum	97.58	207	4	1	1	207	194	399	2e-129	  367
ORF59	gi|8928595|ref|NP_059400.1-orf312-Paramecium_aurelia	40.00	95	57	0	4	98	218	312	3e-20	79.0
ORF59	gi|8928594|ref|NP_059399.1-orf105-Paramecium_aurelia	43.68	87	49	0	105	191	1	87	4e-20	75.5
ORF60	gi|299830294|ref|YP_003734458.1-NADH_dehydrogenase_subunit_9-Paramecium_caudatum	99.46	184	1	0	32	215	1	184	6e-134	  370
ORF60	gi|8928623|ref|NP_059428.1-NADH_dehydrogenase_subunit_9-Paramecium_aurelia	67.98	178	57	0	38	215	3	180	6e-88	  253
ORF62	gi|299830293|ref|YP_003734457.1-NADH_dehydrogenase_subunit_4L-Paramecium_caudatum	100.00	114	0	0	1	114	1	114	1e-70	  204
ORF62	gi|8928622|ref|NP_059427.1-orf113-Paramecium_aurelia	67.29	107	33	1	8	114	8	112	5e-31	  102
ORF63	gi|299830292|ref|YP_003734456.1-NADH_dehydrogenase_subunit_3-Paramecium_caudatum	98.33	120	2	0	1	120	1	120	6e-80	  227
ORF63	gi|8928621|ref|NP_059426.1-NADH_dehydrogenase_subunit_3-Paramecium_aurelia	85.00	120	18	0	1	120	1	120	2e-61	  180
ORF64	gi|299830291|ref|YP_003734455.1-Ymf61-Paramecium_caudatum	98.94	189	2	0	39	227	1	189	2e-126	  352
ORF64	gi|8928620|ref|NP_059425.1-orf189_2-Paramecium_aurelia	40.21	189	113	0	39	227	1	189	5e-40	  131
ORF65	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	98.33	60	1	0	6	65	1	60	9e-07	37.0
ORF66	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	99.40	336	2	0	1	336	112	447	0.0	  595
ORF66	gi|8928619|ref|NP_059424.1-haem_lyase-Paramecium_aurelia	53.96	139	64	0	1	139	112	250	4e-48	  157
ORF67	gi|299830289|ref|YP_003734453.1-ribosomal_protein_L16-Paramecium_caudatum	99.40	166	1	0	3	168	1	166	2e-116	  323
ORF67	gi|8928617|ref|NP_059422.1-ribosomal_protein_L16-Paramecium_aurelia	74.67	150	38	0	3	152	1	150	1e-79	  230
ORF68	gi|299830288|ref|YP_003734452.1-Ymf59-Paramecium_caudatum	99.21	127	1	0	2	128	1	127	3e-89	  251
ORF68	gi|8928616|ref|NP_059421.1-orf124-Paramecium_aurelia	40.32	124	71	1	2	125	1	121	3e-31	  103
ORF69	gi|299830287|ref|YP_003734451.1-Ymf78-Paramecium_caudatum	98.55	69	1	0	5	73	1	69	1e-44	  133
ORF69	gi|8928615|ref|NP_059420.1-orf66-Paramecium_aurelia	48.33	60	31	0	5	64	1	60	1e-14	56.2
ORF70	gi|299830286|ref|YP_003734450.1-Ymf65-Paramecium_caudatum	98.74	318	4	0	2	319	1	318	0.0	  540
ORF70	gi|8928614|ref|NP_059419.1-orf196-Paramecium_aurelia	54.44	180	82	0	22	201	17	196	6e-46	  150
ORF70	gi|8928613|ref|NP_059418.1-orf156-Paramecium_aurelia	77.03	74	17	0	211	284	1	74	1e-30	  107
ORF71	gi|299830285|ref|YP_003734449.1-NADH_dehydrogenase_subunit_1_b-Paramecium_caudatum	100.00	63	0	0	1	63	1	63	8e-40	  120
ORF71	gi|8928612|ref|NP_059417.1-NADH_dehydrogenase_subunit_1_b-Paramecium_aurelia	71.43	49	13	1	14	62	25	72	2e-20	71.6
ORF72	gi|299830283|ref|YP_003734447.1-Ymf63-Paramecium_caudatum	98.29	525	9	0	117	641	1	525	0.0	 1015
ORF72	gi|299830284|ref|YP_003734448.1-Ymf87-Paramecium_caudatum	99.05	105	1	0	3	107	1	105	1e-64	  203
ORF72	gi|8928611|ref|NP_059416.1-orf314-Paramecium_aurelia	44.32	273	138	3	381	639	41	313	9e-58	  192
ORF73	gi|299830282|ref|YP_003734446.1-ATP_synthase_F0_subunit_9-Paramecium_caudatum	100.00	75	0	0	3	77	1	75	7e-49	  145
ORF73	gi|8928610|ref|NP_059415.1-ATP_synthase_F0_subunit_9-Paramecium_aurelia	100.00	75	0	0	3	77	1	75	7e-49	  145
ORF74	gi|299830281|ref|YP_003734445.1-Ymf83-Paramecium_caudatum	99.40	168	1	0	20	187	1	168	5e-115	  321
ORF74	gi|8928609|ref|NP_059414.1-orf168-Paramecium_aurelia	55.19	154	69	0	20	173	1	154	4e-56	  171
ORF76	gi|299830280|ref|YP_003734444.1-Ymf64-Paramecium_caudatum	97.44	1718	38	1	5	1722	1	1712	0.0	 3241
ORF76	gi|8928607|ref|NP_059412.1-orf234-Paramecium_aurelia	56.72	201	87	0	1522	1722	34	234	3e-61	  205
ORF81	gi|299830275|ref|YP_003734439.1-NADH_dehydrogenase_subunit_2-Paramecium_caudatum	98.81	168	1	1	24	191	1	167	3e-93	  266
ORF81	gi|8928602|ref|NP_059407.1-NADH_dehydrogenase_subunit_2-Paramecium_aurelia	72.12	165	46	0	27	191	2	166	5e-30	  103
ORF97	gi|299830279|ref|YP_003734443.1-ribosomal_protein_L6-Paramecium_caudatum	98.88	178	2	0	4	181	1	178	2e-123	  342
ORF97	gi|8928606|ref|NP_059411.1-orf178_1-Paramecium_aurelia	71.91	178	50	0	4	181	1	178	1e-68	  203
ORF98	gi|299830278|ref|YP_003734442.1-Ymf79-Paramecium_caudatum	98.63	73	1	0	3	75	1	73	1e-39	  121
ORF98	gi|8928605|ref|NP_059410.1-orf70-Paramecium_aurelia	38.24	68	42	0	3	70	1	68	6e-12	49.3
ORF99	gi|299830277|ref|YP_003734441.1-ribosomal_protein_S14-Paramecium_caudatum	99.02	102	1	0	2	103	1	102	1e-69	  199
ORF99	gi|8928604|ref|NP_059409.1-ribosomal_protein_S14-Paramecium_aurelia	59.80	102	41	0	2	103	1	102	1e-41	  128
ORF100	gi|299830276|ref|YP_003734440.1-NADH_dehydrogenase_subunit_7-Paramecium_caudatum	97.87	423	8	1	12	433	1	423	0.0	  868
ORF100	gi|8928603|ref|NP_059408.1-NADH_dehydrogenase_subunit_7-Paramecium_aurelia	92.89	422	30	0	12	433	1	422	0.0	  838