ORF42	gi|299830276|ref|YP_003734440.1-NADH_dehydrogenase_subunit_7-Paramecium_caudatum	96.93	423	12	1	2	423	1	423	0.0	  866
ORF42	gi|8928603|ref|NP_059408.1-NADH_dehydrogenase_subunit_7-Paramecium_aurelia	92.65	422	31	0	2	423	1	422	0.0	  837
ORF43	gi|299830277|ref|YP_003734441.1-ribosomal_protein_S14-Paramecium_caudatum	98.68	76	1	0	1	76	27	102	3e-51	  152
ORF43	gi|8928604|ref|NP_059409.1-ribosomal_protein_S14-Paramecium_aurelia	60.53	76	30	0	1	76	27	102	2e-30	98.2
ORF44	gi|299830278|ref|YP_003734442.1-Ymf79-Paramecium_caudatum	87.67	73	9	0	3	75	1	73	3e-34	  107
ORF44	gi|8928605|ref|NP_059410.1-orf70-Paramecium_aurelia	44.12	68	38	0	3	70	1	68	8e-15	57.0
ORF45	gi|299830279|ref|YP_003734443.1-ribosomal_protein_L6-Paramecium_caudatum	97.19	178	5	0	4	181	1	178	7e-122	  338
ORF45	gi|8928606|ref|NP_059411.1-orf178_1-Paramecium_aurelia	72.47	178	49	0	4	181	1	178	7e-69	  203
ORF66	gi|299830253|ref|YP_003734417.1-Ymf66-Paramecium_caudatum	98.29	410	7	0	6	415	1	410	0.0	  785
ORF66	gi|8928578|ref|NP_059383.1-orf221-Paramecium_aurelia	85.82	141	20	0	287	427	80	220	3e-83	  251
ORF66	gi|8928579|ref|NP_059384.1-orf189_1-Paramecium_aurelia	71.43	133	38	0	35	167	33	165	1e-62	  196
ORF70	gi|299830254|ref|YP_003734418.1-Ymf57-Paramecium_caudatum	97.22	72	2	0	1	72	1	72	4e-40	  124
ORF70	gi|8928580|ref|NP_059385.1-orf100-Paramecium_aurelia	76.32	76	18	0	1	76	1	76	7e-33	  105
ORF71	gi|299830255|ref|YP_003734419.1-NADH_dehydrogenase_subunit_4-Paramecium_caudatum	96.81	501	15	1	7	506	1	501	0.0	  920
ORF71	gi|8928581|ref|NP_059386.1-NADH_dehydrogenase_subunit_4-Paramecium_aurelia	70.06	501	149	1	18	518	13	512	0.0	  698
ORF71	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	25.42	295	196	8	176	455	129	414	1e-06	42.4
ORF71	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	24.74	291	177	10	167	431	144	418	2e-06	41.2
ORF72	gi|299830256|ref|YP_003734420.1-Ymf80-Paramecium_caudatum	98.88	89	1	0	16	104	1	89	7e-55	  162
ORF72	gi|8928582|ref|NP_059387.1-orf89-Paramecium_aurelia	68.00	75	24	0	16	90	1	75	2e-32	  104
ORF73	gi|299830257|ref|YP_003734421.1-ribosomal_protein_L14-Paramecium_caudatum	99.16	119	1	0	1	119	1	119	4e-84	  238
ORF73	gi|8928583|ref|NP_059388.1-ribosomal_protein_L14-Paramecium_aurelia	75.63	119	29	0	1	119	1	119	3e-68	  197
ORF74	gi|299830258|ref|YP_003734422.1-NADH_dehydrogenase_subunit_6-Paramecium_caudatum	98.05	256	5	0	1	256	1	256	1e-167	  461
ORF74	gi|8928584|ref|NP_059389.1-orf265_2-Paramecium_aurelia	73.55	242	64	0	1	242	1	242	6e-90	  263
ORF76	gi|299830259|ref|YP_003734423.1-NADH_dehydrogenase_subunit_1_a-Paramecium_caudatum	98.91	276	3	0	42	317	3	278	0.0	  529
ORF76	gi|8928585|ref|NP_059390.1-NADH_dehydrogenase_subunit_1_a-Paramecium_aurelia	93.77	273	17	0	49	321	2	274	8e-172	  475
ORF79	gi|299830260|ref|YP_003734424.1-cytochrome_c_oxidase_subunit_1-Paramecium_caudatum	98.35	728	10	1	1	728	20	745	0.0	 1457
ORF79	gi|8928586|ref|NP_059391.1-cytochrome_c_oxidase_subunit_1-Paramecium_aurelia	91.61	703	58	1	26	728	35	736	0.0	 1280
ORF82	gi|299830261|ref|YP_003734425.1-Ymf68-Paramecium_caudatum	96.21	290	10	1	1	289	93	382	0.0	  527
ORF82	gi|8928587|ref|NP_059392.1-orf393-Paramecium_aurelia	85.82	268	38	0	22	289	114	381	1e-168	  470
ORF83	gi|299830261|ref|YP_003734425.1-Ymf68-Paramecium_caudatum	94.12	68	4	0	1	68	6	73	5e-21	78.2
ORF83	gi|8928587|ref|NP_059392.1-orf393-Paramecium_aurelia	53.66	82	38	0	1	82	6	87	3e-09	44.7
ORF84	gi|299830262|ref|YP_003734426.1-Ymf67-Paramecium_caudatum	90.68	354	33	0	1	354	1	354	0.0	  582
ORF84	gi|8928589|ref|NP_059394.1-orf265_1-Paramecium_aurelia	48.15	216	112	0	1	216	1	216	7e-63	  197
ORF84	gi|8928588|ref|NP_059393.1-orf90-Paramecium_aurelia	83.15	89	15	0	266	354	2	90	2e-32	  111
ORF85	gi|299830263|ref|YP_003734427.1-Ymf56-Paramecium_caudatum	97.53	81	2	0	34	114	1	81	3e-48	  145
ORF85	gi|8928590|ref|NP_059395.1-orf78-Paramecium_aurelia	75.34	73	18	0	42	114	6	78	5e-22	77.8
ORF87	gi|299830264|ref|YP_003734428.1-cytochrome_c_oxidase_subunit_2-Paramecium_caudatum	98.27	577	9	1	5	580	1	577	0.0	 1150
ORF87	gi|8928591|ref|NP_059396.1-cytochrome_c_oxidase_subunit_2-Paramecium_aurelia	85.24	576	85	0	5	580	1	576	0.0	  986
ORF88	gi|299830265|ref|YP_003734429.1-NADH_dehydrogenase_subunit_5-Paramecium_caudatum	98.49	597	9	0	45	641	1	597	0.0	 1135
ORF88	gi|8928592|ref|NP_059397.1-NADH_dehydrogenase_subunit_5-Paramecium_aurelia	74.51	557	142	0	70	626	2	558	0.0	  819
ORF89	gi|299830266|ref|YP_003734430.1-apocytochrome_b-Paramecium_caudatum	99.55	442	2	0	22	463	1	442	0.0	  892
ORF89	gi|8928593|ref|NP_059398.1-apocytochrome_b-Paramecium_aurelia	91.35	416	36	0	22	437	1	416	0.0	  759
ORF91	gi|299830267|ref|YP_003734431.1-Ymf76-Paramecium_caudatum	89.25	400	42	1	6	405	1	399	0.0	  531
ORF91	gi|8928594|ref|NP_059399.1-orf105-Paramecium_aurelia	47.13	87	46	0	303	389	1	87	5e-20	77.8
ORF91	gi|8928595|ref|NP_059400.1-orf312-Paramecium_aurelia	41.05	95	56	0	202	296	218	312	6e-20	81.6
ORF92	gi|299830268|ref|YP_003734432.1-ribosomal_protein_S13-Paramecium_caudatum	95.49	244	11	0	18	261	1	244	1e-162	  447
ORF92	gi|8928596|ref|NP_059401.1-ribosomal_protein_S13-Paramecium_aurelia	67.62	244	79	0	18	261	1	244	2e-118	  335
ORF93	gi|299830269|ref|YP_003734433.1-ribosomal_protein_S3-Paramecium_caudatum	77.13	363	82	1	21	382	1	363	0.0	  526
ORF93	gi|8928597|ref|NP_059402.1-ribosomal_protein_S3-Paramecium_aurelia	55.66	106	47	0	21	126	1	106	3e-43	  143
ORF94	gi|299830270|ref|YP_003734434.1-ribosomal_protein_S19-Paramecium_caudatum	98.86	88	1	0	5	92	1	88	3e-59	  172
ORF95	gi|299830271|ref|YP_003734435.1-ribosomal_protein_L12-Paramecium_caudatum	96.41	223	8	0	1	223	43	265	2e-159	  439
ORF95	gi|8928598|ref|NP_059403.1-ribosomal_protein_L2-Paramecium_aurelia	71.50	214	61	0	1	214	43	256	2e-115	  327
ORF96	gi|299830272|ref|YP_003734436.1-Ymf84-Paramecium_caudatum	95.45	154	7	0	15	168	1	154	2e-103	  291
ORF96	gi|8928599|ref|NP_059404.1-orf178_2-Paramecium_aurelia	33.53	170	113	0	15	184	8	177	2e-20	77.4
ORF97	gi|299830273|ref|YP_003734437.1-NADH_dehydrogenase_subunit_10-Paramecium_caudatum	100.00	141	0	0	1	141	14	154	5e-107	  298
ORF97	gi|8928600|ref|NP_059405.1-NADH_dehydrogenase_subunit_10-Paramecium_aurelia	95.74	141	6	0	1	141	14	154	7e-103	  288
ORF98	gi|299830274|ref|YP_003734438.1-ribosomal_protein_S12-Paramecium_caudatum	97.12	139	4	0	5	143	1	139	3e-96	  270
ORF98	gi|8928601|ref|NP_059406.1-ribosomal_protein_S12-Paramecium_aurelia	85.51	138	20	0	6	143	1	138	2e-79	  227
ORF99	gi|299830275|ref|YP_003734439.1-NADH_dehydrogenase_subunit_2-Paramecium_caudatum	98.16	163	2	1	24	186	1	162	1e-90	  259
ORF99	gi|8928602|ref|NP_059407.1-NADH_dehydrogenase_subunit_2-Paramecium_aurelia	72.50	160	44	0	27	186	2	161	1e-27	97.1
ORF104	gi|299830280|ref|YP_003734444.1-Ymf64-Paramecium_caudatum	71.82	1714	435	3	12	1679	1	1712	0.0	 2041
ORF104	gi|8928607|ref|NP_059412.1-orf234-Paramecium_aurelia	56.72	201	87	0	1479	1679	34	234	3e-61	  204
ORF106	gi|299830281|ref|YP_003734445.1-Ymf83-Paramecium_caudatum	94.05	168	10	0	21	188	1	168	3e-102	  288
ORF106	gi|8928609|ref|NP_059414.1-orf168-Paramecium_aurelia	55.84	154	68	0	21	174	1	154	3e-56	  171
ORF107	gi|299830282|ref|YP_003734446.1-ATP_synthase_F0_subunit_9-Paramecium_caudatum	100.00	75	0	0	3	77	1	75	6e-49	  145
ORF107	gi|8928610|ref|NP_059415.1-ATP_synthase_F0_subunit_9-Paramecium_aurelia	100.00	75	0	0	3	77	1	75	6e-49	  145
ORF108	gi|299830283|ref|YP_003734447.1-Ymf63-Paramecium_caudatum	89.27	531	51	1	117	647	1	525	0.0	  837
ORF108	gi|8928611|ref|NP_059416.1-orf314-Paramecium_aurelia	43.22	273	141	2	387	645	41	313	1e-56	  189
ORF108	gi|299830284|ref|YP_003734448.1-Ymf87-Paramecium_caudatum	90.48	105	10	0	3	107	1	105	3e-52	  169
ORF109	gi|299830285|ref|YP_003734449.1-NADH_dehydrogenase_subunit_1_b-Paramecium_caudatum	96.83	63	2	0	1	63	1	63	2e-39	  119
ORF109	gi|8928612|ref|NP_059417.1-NADH_dehydrogenase_subunit_1_b-Paramecium_aurelia	71.43	49	13	1	14	62	25	72	2e-20	71.6
ORF110	gi|299830286|ref|YP_003734450.1-Ymf65-Paramecium_caudatum	86.11	396	24	2	2	397	1	365	2e-123	  358
ORF110	gi|8928614|ref|NP_059419.1-orf196-Paramecium_aurelia	56.11	180	79	0	22	201	17	196	6e-49	  159
ORF110	gi|8928613|ref|NP_059418.1-orf156-Paramecium_aurelia	60.87	184	41	2	211	394	1	153	6e-36	  123
ORF113	gi|299830287|ref|YP_003734451.1-Ymf78-Paramecium_caudatum	94.20	69	4	0	5	73	1	69	4e-43	  130
ORF113	gi|8928615|ref|NP_059420.1-orf66-Paramecium_aurelia	51.67	60	29	0	5	64	1	60	2e-15	58.9
ORF114	gi|299830288|ref|YP_003734452.1-Ymf59-Paramecium_caudatum	96.85	127	4	0	2	128	1	127	1e-87	  247
ORF114	gi|8928616|ref|NP_059421.1-orf124-Paramecium_aurelia	39.52	124	72	1	2	125	1	121	6e-31	  102
ORF115	gi|299830289|ref|YP_003734453.1-ribosomal_protein_L16-Paramecium_caudatum	98.19	166	3	0	3	168	1	166	9e-116	  322
ORF115	gi|8928617|ref|NP_059422.1-ribosomal_protein_L16-Paramecium_aurelia	74.00	150	39	0	3	152	1	150	9e-80	  230
ORF116	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	92.73	110	8	0	16	125	324	433	1e-37	  127
ORF117	gi|299830290|ref|YP_003734454.1-heme_maturase-Paramecium_caudatum	88.10	294	35	0	6	299	1	294	1e-93	  282
ORF117	gi|8928619|ref|NP_059424.1-haem_lyase-Paramecium_aurelia	48.54	239	122	1	9	247	5	242	4e-66	  205
ORF118	gi|299830291|ref|YP_003734455.1-Ymf61-Paramecium_caudatum	93.15	73	5	0	1	73	117	189	6e-42	  130
ORF118	gi|8928620|ref|NP_059425.1-orf189_2-Paramecium_aurelia	45.21	73	40	0	1	73	117	189	1e-14	57.8
ORF119	gi|299830291|ref|YP_003734455.1-Ymf61-Paramecium_caudatum	89.02	82	9	0	22	103	1	82	6e-46	  142
ORF119	gi|8928620|ref|NP_059425.1-orf189_2-Paramecium_aurelia	39.51	81	49	0	22	102	1	81	1e-16	64.7
ORF120	gi|299830292|ref|YP_003734456.1-NADH_dehydrogenase_subunit_3-Paramecium_caudatum	94.17	120	7	0	13	132	1	120	4e-65	  190
ORF120	gi|8928621|ref|NP_059426.1-NADH_dehydrogenase_subunit_3-Paramecium_aurelia	84.17	120	19	0	13	132	1	120	3e-62	  182
ORF121	gi|299830293|ref|YP_003734457.1-NADH_dehydrogenase_subunit_4L-Paramecium_caudatum	96.52	115	4	0	1	115	1	115	5e-69	  199
ORF121	gi|8928622|ref|NP_059427.1-orf113-Paramecium_aurelia	65.74	108	35	1	8	115	8	113	7e-31	  101
ORF123	gi|299830294|ref|YP_003734458.1-NADH_dehydrogenase_subunit_9-Paramecium_caudatum	95.11	184	9	0	32	215	1	184	3e-129	  358
ORF123	gi|8928623|ref|NP_059428.1-NADH_dehydrogenase_subunit_9-Paramecium_aurelia	66.29	178	60	0	38	215	3	180	1e-86	  250