#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
yejR|P.caudatum-Sample_C104	yejR|P.octaurelia-Sample_1038	0.548378	1.85335	0.295885	1041	301.906	739.094	486	207.299	278.701
yejR|P.caudatum-Sample_C104	yejR|P.tetraurelia-Sample_291	0.739397	2.76294	0.267612	1134	279.063	854.937	533	154.157	378.843
yejR|P.caudatum-Sample_C104	yejR|P.sexaurelia-Sample_130	0.52879	1.35828	0.389308	1173	330.893	842.107	517	207.598	309.402
yejR|P.caudatum-Sample_C104	yejR|P.biaurelia-Sample_379	1.05059	0.495432	2.12054	1104	270.119	833.881	522	89.9133	432.087
yejR|P.caudatum-Sample_C104	yejR|Sample_M13	0.173864	0.25486	0.682193	276	28.86	247.14	42	5.8726	36.1274
yejR|P.caudatum-Sample_C104	yejR|Sample_Peniche3I	0.300822	0.261251	1.15147	1122	191.383	930.617	267	41.4062	225.594
yejR|P.caudatum-Sample_C104	yejR|Sample_C026	0.140925	1.34625	0.10468	1353	175.25	1177.75	242	92.7299	149.27
yejR|P.octaurelia-Sample_1038	yejR|P.tetraurelia-Sample_291	0.0663959	0.825154	0.0804648	1110	334.007	775.993	198	148.97	49.0301
yejR|P.octaurelia-Sample_1038	yejR|P.sexaurelia-Sample_130	0.168685	1.40853	0.11976	1107	315.399	791.601	293	174.204	118.796
yejR|P.octaurelia-Sample_1038	yejR|P.biaurelia-Sample_379	0.107643	1.06014	0.101537	1104	307.303	796.697	236	156.461	79.5389
yejR|P.octaurelia-Sample_1038	yejR|Sample_M13	0.594988	0.728304	0.816951	351	124.377	226.623	138	48.9397	89.0603
yejR|P.octaurelia-Sample_1038	yejR|Sample_Peniche3I	0.811996	0.928039	0.874959	996	289.715	706.285	457	128.927	328.073
yejR|P.octaurelia-Sample_1038	yejR|Sample_C026	0.595617	1.66959	0.356745	984	301.686	682.314	430	160.403	269.597
yejR|P.tetraurelia-Sample_291	yejR|P.sexaurelia-Sample_130	0.154872	1.31067	0.118163	1287	345.204	941.796	345	213.803	131.197
yejR|P.tetraurelia-Sample_291	yejR|P.biaurelia-Sample_379	0.0878372	1.9979	0.0439648	1287	326.541	960.459	276	196.631	79.3687
yejR|P.tetraurelia-Sample_291	yejR|Sample_M13	0.558725	0.613652	0.910492	312	145.783	166.217	115	52.6103	62.3897
yejR|P.tetraurelia-Sample_291	yejR|Sample_Peniche3I	0.670527	1.08492	0.618046	1230	403.038	826.962	582	231.128	350.872
yejR|P.tetraurelia-Sample_291	yejR|Sample_C026	0.904934	0.758174	1.19357	1167	355.906	811.094	549	144.214	404.786
yejR|P.sexaurelia-Sample_130	yejR|P.biaurelia-Sample_379	0.133981	2.30545	0.058115	1278	378.596	899.404	329	219.491	109.509
yejR|P.sexaurelia-Sample_130	yejR|Sample_M13	0.903902	0.381939	2.36661	330	163.166	166.834	125	43.4217	81.5783
yejR|P.sexaurelia-Sample_130	yejR|Sample_Peniche3I	0.651435	2.33065	0.279508	1209	373.332	835.668	544	198.363	345.637
yejR|P.sexaurelia-Sample_130	yejR|Sample_C026	0.760854	0.707052	1.07609	1134	282.978	851.022	499	114.045	384.955
yejR|P.biaurelia-Sample_379	yejR|Sample_M13	0.662761	0.598824	1.10677	309	81.1472	227.853	119	27.1717	91.8283
yejR|P.biaurelia-Sample_379	yejR|Sample_Peniche3I	0.736459	1.04456	0.70504	1182	379.692	802.308	571	214.035	356.965
yejR|P.biaurelia-Sample_379	yejR|Sample_C026	0.676296	1.26867	0.533073	1179	355.932	823.068	571	217.769	353.231
yejR|Sample_M13	yejR|Sample_Peniche3I	0.0960743	0.124485	0.771772	324	50.7414	273.259	30	5.76827	24.2317
yejR|Sample_M13	yejR|Sample_C026	0.17819	0.247278	0.720605	285	31.3419	253.658	46	6.4632	39.5368
yejR|Sample_Peniche3I	yejR|Sample_C026	0.285715	0.37159	0.7689	1092	143.997	948.003	259	40.4785	218.521
#Average Ka: 0.474666192857
#Average Ks: 1.07492621429
#Average KaKs: 0.665457985714