#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpS19|Sample_C026	rpS19|P.multimicronucleatum-Sample_M04	0.288211	2.04195	0.141145	198	15.2197	182.78	58	14.9826	43.0174
rpS19|Sample_C026	rpS19|P.sexaurelia-Sample_130	0.740154	0.339515	2.18003	177	41.9169	135.083	73	11.0344	61.9656
rpS19|Sample_C026	rpS19|P.biaurelia-Sample_379	0.320192	2.76295	0.115888	198	39.8025	158.197	74	33.1083	40.8917
rpS19|Sample_C026	rpS19|P.caudatum-Sample_C104	0.0305403	2.46641	0.0123825	276	26.8038	249.196	29	21.5824	7.41759
rpS19|Sample_C026	rpS19|Sample_Peniche3I	0.258131	2.11289	0.12217	201	16.7298	184.27	55	15.2978	39.7022
rpS19|Sample_C026	rpS19|Sample_M13	0.257948	1.88204	0.137058	201	12.2974	188.703	53	12.2901	40.7099
rpS19|P.multimicronucleatum-Sample_M04	rpS19|P.sexaurelia-Sample_130	0.290372	2.87139	0.101126	198	45.9943	152.006	76	39.821	36.179
rpS19|P.multimicronucleatum-Sample_M04	rpS19|P.biaurelia-Sample_379	0.303051	2.72533	0.111198	204	37.8555	166.145	77	36.064	40.936
rpS19|P.multimicronucleatum-Sample_M04	rpS19|P.caudatum-Sample_C104	0.268656	2.21771	0.121141	198	19.2392	178.761	57	17.2985	39.7015
rpS19|P.multimicronucleatum-Sample_M04	rpS19|Sample_Peniche3I	0.089886	2.07744	0.0432676	204	15.9574	188.043	31	15.212	15.788
rpS19|P.multimicronucleatum-Sample_M04	rpS19|Sample_M13	0.0939078	1.73401	0.0541566	204	10.0947	193.905	26	9.05853	16.9415
rpS19|P.sexaurelia-Sample_130	rpS19|P.biaurelia-Sample_379	0.164014	1.06963	0.153338	198	64.9855	133.014	52	32.7166	19.2834
rpS19|P.sexaurelia-Sample_130	rpS19|P.caudatum-Sample_C104	0.430443	0.398773	1.07942	174	59.063	114.937	54	16.8429	37.1571
rpS19|P.sexaurelia-Sample_130	rpS19|Sample_Peniche3I	0.266176	2.02128	0.131687	198	52.6729	145.327	69	36.8366	32.1634
rpS19|P.sexaurelia-Sample_130	rpS19|Sample_M13	0.234283	2.91434	0.0803897	198	48.7055	149.294	70	40.2605	29.7395
rpS19|P.biaurelia-Sample_379	rpS19|P.caudatum-Sample_C104	0.541049	0.415355	1.30262	177	42.326	134.674	63	12.5231	50.4769
rpS19|P.biaurelia-Sample_379	rpS19|Sample_Peniche3I	0.29796	1.7969	0.165819	201	46.2381	154.762	69	31.5196	37.4804
rpS19|P.biaurelia-Sample_379	rpS19|Sample_M13	0.276498	2.81525	0.0982144	201	42.677	158.323	70	33.898	36.102
rpS19|P.caudatum-Sample_C104	rpS19|Sample_Peniche3I	0.390206	0.22823	1.70971	171	48.0795	122.921	46	9.13533	36.8647
rpS19|P.caudatum-Sample_C104	rpS19|Sample_M13	0.279776	99	0.00282602	201	15.2304	185.77	59	16.1803	42.8197
rpS19|Sample_Peniche3I	rpS19|Sample_M13	0.0212833	0.776705	0.0274021	204	13.3803	190.62	10	6	4
#Average Ka: 0.278225590476
#Average Ks: 6.41276657143
#Average KaKs: 0.375761377143