#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpS14|P.biaurelia-Sample_379	rpS14|P.multimicronucleatum-Sample_M04	0.218574	3.04766	0.0717186	309	58.1804	250.82	100	52.9236	47.0764
rpS14|P.biaurelia-Sample_379	rpS14|P.caudatum-Sample_C104	0.445304	0.663198	0.671449	282	70.8658	211.134	96	27.4846	68.5154
rpS14|P.biaurelia-Sample_379	rpS14|Sample_Peniche3I	0.219258	3.10438	0.0706286	309	62.7513	246.249	101	54.787	46.213
rpS14|P.biaurelia-Sample_379	rpS14|P.tetraurelia-Sample_291	0.0622367	1.10069	0.0565435	306	83.6957	222.304	55	41.8221	13.1779
rpS14|P.biaurelia-Sample_379	rpS14|P.octaurelia-Sample_1038	0.0397019	0.703143	0.0564634	306	97.6599	208.34	47	38.9909	8.00908
rpS14|P.biaurelia-Sample_379	rpS14|P.sexaurelia-Sample_130	0.0754246	1.61525	0.0466954	309	70.8137	238.186	64	46.9464	17.0536
rpS14|P.biaurelia-Sample_379	rpS14|Sample_M13	0.224835	3.09536	0.0726361	309	62.0008	246.999	103	55.6296	47.3704
rpS14|P.biaurelia-Sample_379	rpS14|Sample_C026	0.398179	0.802739	0.496025	285	71.8552	213.145	95	30.6574	64.3426
rpS14|P.multimicronucleatum-Sample_M04	rpS14|P.caudatum-Sample_C104	0.170946	2.37	0.0721292	309	23.5705	285.43	61	17.7749	43.2251
rpS14|P.multimicronucleatum-Sample_M04	rpS14|Sample_Peniche3I	0.0281347	1.18875	0.0236675	309	25.6534	283.347	22	14.1927	7.80726
rpS14|P.multimicronucleatum-Sample_M04	rpS14|P.tetraurelia-Sample_291	0.275519	3.16103	0.0871613	306	67.674	238.326	114	59.7685	54.2315
rpS14|P.multimicronucleatum-Sample_M04	rpS14|P.octaurelia-Sample_1038	0.263745	3.17981	0.0829437	306	69.3906	236.609	107	54.9829	52.0171
rpS14|P.multimicronucleatum-Sample_M04	rpS14|P.sexaurelia-Sample_130	0.508065	0.233895	2.17219	279	69.1814	209.819	86	13.1255	72.8745
rpS14|P.multimicronucleatum-Sample_M04	rpS14|Sample_M13	0.0441796	1.0687	0.0413394	309	30.8627	278.137	28	16.103	11.897
rpS14|P.multimicronucleatum-Sample_M04	rpS14|Sample_C026	0.163818	2.45521	0.0667227	309	26.4066	282.593	63	21.7365	41.2635
rpS14|P.caudatum-Sample_C104	rpS14|Sample_Peniche3I	0.147281	2.39337	0.0615372	309	24.3165	284.683	56	18.26	37.74
rpS14|P.caudatum-Sample_C104	rpS14|P.tetraurelia-Sample_291	0.305825	3.11953	0.0980356	306	64.0312	241.969	119	58.9683	60.0317
rpS14|P.caudatum-Sample_C104	rpS14|P.octaurelia-Sample_1038	0.438959	0.904362	0.48538	282	74.0325	207.968	100	32.8177	67.1823
rpS14|P.caudatum-Sample_C104	rpS14|P.sexaurelia-Sample_130	0.27347	3.16669	0.0863582	309	68.1873	240.813	111	56.5543	54.4457
rpS14|P.caudatum-Sample_C104	rpS14|Sample_M13	0.166719	2.44378	0.0682217	309	26.0072	282.993	66	24.0818	41.9182
rpS14|P.caudatum-Sample_C104	rpS14|Sample_C026	0.0411601	1.31254	0.0313592	309	27.9236	281.076	26	14.7619	11.2381
rpS14|Sample_Peniche3I	rpS14|P.tetraurelia-Sample_291	0.268652	3.19374	0.0841183	306	70.6913	235.309	111	58.7313	52.2687
rpS14|Sample_Peniche3I	rpS14|P.octaurelia-Sample_1038	0.266943	2.54876	0.104735	306	74.054	231.946	105	53.6838	51.3162
rpS14|Sample_Peniche3I	rpS14|P.sexaurelia-Sample_130	0.213018	3.19542	0.0666634	309	70.85	238.15	101	57.3718	43.6282
rpS14|Sample_Peniche3I	rpS14|Sample_M13	0.0147252	1.11413	0.0132167	309	33.8867	275.113	20	16	4
rpS14|Sample_Peniche3I	rpS14|Sample_C026	0.153355	2.49205	0.0615378	309	27.7359	281.264	66	27.2901	38.7099
rpS14|P.tetraurelia-Sample_291	rpS14|P.octaurelia-Sample_1038	0.0445925	0.534134	0.0834856	306	95.4138	210.586	43	33.9478	9.05216
rpS14|P.tetraurelia-Sample_291	rpS14|P.sexaurelia-Sample_130	0.101082	1.23832	0.0816281	306	73.5217	232.478	62	40.0998	21.9002
rpS14|P.tetraurelia-Sample_291	rpS14|Sample_M13	0.275449	3.174	0.0867827	306	68.8549	237.145	116	62.1996	53.8004
rpS14|P.tetraurelia-Sample_291	rpS14|Sample_C026	0.276041	3.05385	0.0903911	306	58.6626	247.337	114	57.3863	56.6137
rpS14|P.octaurelia-Sample_1038	rpS14|P.sexaurelia-Sample_130	0.0763782	1.05956	0.0720849	306	80.3274	225.673	56	39.6524	16.3476
rpS14|P.octaurelia-Sample_1038	rpS14|Sample_M13	0.272148	3.21578	0.0846289	306	72.7989	233.201	110	57.5631	52.4369
rpS14|P.octaurelia-Sample_1038	rpS14|Sample_C026	0.43527	0.89843	0.484479	285	75.166	209.834	101	33.3223	67.6777
rpS14|P.sexaurelia-Sample_130	rpS14|Sample_M13	0.21749	3.16424	0.0687336	309	67.9648	241.035	101	56.0196	44.9804
rpS14|P.sexaurelia-Sample_130	rpS14|Sample_C026	0.251828	3.17793	0.0792429	309	69.2164	239.784	106	55.2228	50.7772
rpS14|Sample_M13	rpS14|Sample_C026	0.170094	3.12829	0.0543729	309	29.527	279.473	64	21.8034	42.1966
#Average Ka: 0.209677791667
#Average Ks: 2.11996447222
#Average KaKs: 0.178758505556