#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
rpL16|P.multimicronucleatum-Sample_M04	rpL16|P.octaurelia-Sample_1038	0.185103	99	0.00186973	492	118.459	373.541	188	126.908	61.0918
rpL16|P.multimicronucleatum-Sample_M04	rpL16|P.caudatum-Sample_C104	0.189383	3.00029	0.0631214	504	54.6196	449.38	120	45.2604	74.7396
rpL16|P.multimicronucleatum-Sample_M04	rpL16|Sample_Peniche3I	0.0503438	2.16066	0.0233002	495	56.0954	438.905	61	39.7119	21.2881
rpL16|P.multimicronucleatum-Sample_M04	rpL16|Sample_C026	0.167518	2.97268	0.0563527	504	52.6449	451.355	116	48.6165	67.3835
rpL16|P.multimicronucleatum-Sample_M04	rpL16|P.sexaurelia-Sample_130	0.176281	99	0.00178062	504	109.398	394.602	180	118.177	61.8232
rpL16|P.multimicronucleatum-Sample_M04	rpL16|P.biaurelia-Sample_379	0.191614	3.57504	0.0535978	495	117.534	377.466	177	113.397	63.6025
rpL16|P.multimicronucleatum-Sample_M04	rpL16|P.tetraurelia-Sample_291	0.17386	99	0.00175616	504	109.013	394.987	202	140.807	61.1928
rpL16|P.multimicronucleatum-Sample_M04	rpL16|Sample_M13	0.0512261	0.824893	0.0621003	486	78.4337	407.566	58	37.8756	20.1244
rpL16|P.octaurelia-Sample_1038	rpL16|P.caudatum-Sample_C104	0.204101	3.69726	0.0552033	504	138.335	365.665	197	131.993	65.0066
rpL16|P.octaurelia-Sample_1038	rpL16|Sample_Peniche3I	0.175092	99	0.0017686	495	123.946	371.054	188	130.303	57.6967
rpL16|P.octaurelia-Sample_1038	rpL16|Sample_C026	0.167365	3.70976	0.0451148	489	140.66	348.34	180	127.998	52.0023
rpL16|P.octaurelia-Sample_1038	rpL16|P.sexaurelia-Sample_130	0.0261227	1.75593	0.0148768	504	113.584	390.416	87	76.9922	10.0078
rpL16|P.octaurelia-Sample_1038	rpL16|P.biaurelia-Sample_379	0.0169125	0.993847	0.0170172	504	134.223	369.777	72	65.8367	6.16326
rpL16|P.octaurelia-Sample_1038	rpL16|P.tetraurelia-Sample_291	0.0330132	1.07351	0.0307526	504	100.914	403.086	62	48.9964	13.0036
rpL16|P.octaurelia-Sample_1038	rpL16|Sample_M13	0.197699	3.68964	0.0535823	504	136.937	367.063	192	128.568	63.4315
rpL16|P.caudatum-Sample_C104	rpL16|Sample_Peniche3I	0.188136	3.0972	0.0607438	504	62.1534	441.847	122	48.9625	73.0375
rpL16|P.caudatum-Sample_C104	rpL16|Sample_C026	0.0164448	2.0015	0.00821622	504	73.0593	430.941	58	50.9948	7.0052
rpL16|P.caudatum-Sample_C104	rpL16|P.sexaurelia-Sample_130	0.192852	3.71481	0.0519143	504	141.611	362.389	178	116.865	61.1351
rpL16|P.caudatum-Sample_C104	rpL16|P.biaurelia-Sample_379	0.207333	3.70589	0.055947	504	139.936	364.064	186	120.448	65.5517
rpL16|P.caudatum-Sample_C104	rpL16|P.tetraurelia-Sample_291	0.186701	99	0.00188587	504	140.316	363.684	203	143.184	59.8157
rpL16|P.caudatum-Sample_C104	rpL16|Sample_M13	0.174731	3.15354	0.0554078	504	67.0018	436.998	124	56.2722	67.7278
rpL16|Sample_Peniche3I	rpL16|Sample_C026	0.160186	3.06359	0.0522872	504	59.429	444.571	121	57.2425	63.7575
rpL16|Sample_Peniche3I	rpL16|P.sexaurelia-Sample_130	0.197916	3.63709	0.054416	504	127.671	376.329	180	114.855	65.1449
rpL16|Sample_Peniche3I	rpL16|P.biaurelia-Sample_379	0.20444	3.69515	0.0553266	504	137.947	366.053	182	116.96	65.04
rpL16|Sample_Peniche3I	rpL16|P.tetraurelia-Sample_291	0.194165	99	0.00196127	504	127.947	376.053	208	143.905	64.0952
rpL16|Sample_Peniche3I	rpL16|Sample_M13	0.0191698	0.869771	0.02204	504	79.2138	424.786	44	35.9847	8.0153
rpL16|Sample_C026	rpL16|P.sexaurelia-Sample_130	0.17028	3.71291	0.0458617	504	141.252	362.748	170	115.151	54.8487
rpL16|Sample_C026	rpL16|P.biaurelia-Sample_379	0.198304	3.72708	0.0532064	504	143.946	360.054	189	126.745	62.2547
rpL16|Sample_C026	rpL16|P.tetraurelia-Sample_291	0.187112	3.73305	0.0501231	504	145.097	358.903	197	137.968	59.0325
rpL16|Sample_C026	rpL16|Sample_M13	0.152041	3.13715	0.0484648	504	65.5535	438.447	114	53.9654	60.0346
rpL16|P.sexaurelia-Sample_130	rpL16|P.biaurelia-Sample_379	0.0218359	1.71349	0.0127435	504	124.465	379.535	92	83.8449	8.15513
rpL16|P.sexaurelia-Sample_130	rpL16|P.tetraurelia-Sample_291	0.0337899	1.90279	0.0177581	504	110.036	393.964	89	75.9989	13.0011
rpL16|P.sexaurelia-Sample_130	rpL16|Sample_M13	0.204936	3.70336	0.0553379	504	139.464	364.536	177	111.997	65.003
rpL16|P.biaurelia-Sample_379	rpL16|P.tetraurelia-Sample_291	0.0353706	1.24952	0.0283074	504	119.606	384.394	86	72.7504	13.2496
rpL16|P.biaurelia-Sample_379	rpL16|Sample_M13	0.19811	3.71055	0.053391	504	140.808	363.192	186	123.177	62.8228
rpL16|P.tetraurelia-Sample_291	rpL16|Sample_M13	0.198639	99	0.00200645	504	136.636	367.364	206	142.169	63.8306
#Average Ka: 0.143003536111
#Average Ks: 21.4994986389
#Average KaKs: 0.0352650255556