#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
cox2|P.sexaurelia-Sample_130	cox2|Sample_Peniche3I	0.0952282	4.46605	0.0213227	1650	385.576	1264.42	454	341.212	112.788
cox2|P.sexaurelia-Sample_130	cox2|Sample_M13	0.0854171	4.45266	0.0191834	1731	378.751	1352.25	456	347.023	108.977
cox2|P.sexaurelia-Sample_130	cox2|P.biaurelia-Sample_379	0.033262	1.27076	0.0261749	1701	488.296	1212.7	301	261.613	39.3866
cox2|P.sexaurelia-Sample_130	cox2|P.octaurelia-Sample_1038	0.0408272	1.23463	0.0330682	1770	492.745	1277.25	349	298.313	50.6866
cox2|P.sexaurelia-Sample_130	cox2|P.caudatum-Sample_C104	0.431797	0.0921329	4.68667	1554	457.757	1096.24	383	39.0739	343.926
cox2|P.sexaurelia-Sample_130	cox2|P.multimicronucleatum-Sample_M04	0.0908363	99	0.000917539	1743	356.095	1386.9	478	359.501	118.499
cox2|P.sexaurelia-Sample_130	cox2|Sample_C026	0.0816736	4.43267	0.0184254	1701	368.787	1332.21	430	327.028	102.972
cox2|P.sexaurelia-Sample_130	cox2|P.tetraurelia-Sample_291	0.258937	0.0488546	5.30015	1587	457.985	1129.02	262	21.3569	240.643
cox2|Sample_Peniche3I	cox2|Sample_M13	0.00689931	0.702089	0.00982683	1650	192.514	1457.49	86	75.9985	10.0015
cox2|Sample_Peniche3I	cox2|P.biaurelia-Sample_379	0.108606	4.5564	0.0238359	1650	434.934	1215.07	472	349.852	122.148
cox2|Sample_Peniche3I	cox2|P.octaurelia-Sample_1038	0.469603	0.17934	2.61851	1473	411.485	1061.52	416	63.0628	352.937
cox2|Sample_Peniche3I	cox2|P.caudatum-Sample_C104	0.162707	0.351403	0.463022	1542	318.414	1223.59	265	87.2488	177.751
cox2|Sample_Peniche3I	cox2|P.multimicronucleatum-Sample_M04	0.0229842	2.26518	0.0101468	1650	164.569	1485.43	151	117.405	33.595
cox2|Sample_Peniche3I	cox2|Sample_C026	0.165592	0.29339	0.564409	1542	329.816	1212.18	257	78.4238	178.576
cox2|Sample_Peniche3I	cox2|P.tetraurelia-Sample_291	0.484739	0.157946	3.06901	1476	416.471	1059.53	418	57.3936	360.606
cox2|Sample_M13	cox2|P.biaurelia-Sample_379	0.0981923	4.53959	0.0216302	1701	425.296	1275.7	471	354.061	116.939
cox2|Sample_M13	cox2|P.octaurelia-Sample_1038	0.0926436	4.57339	0.0202571	1737	444.904	1292.1	487	374.844	112.156
cox2|Sample_M13	cox2|P.caudatum-Sample_C104	0.145067	0.340512	0.426026	1635	328.788	1306.21	259	87.6788	171.321
cox2|Sample_M13	cox2|P.multimicronucleatum-Sample_M04	0.0204883	1.80211	0.0113691	1731	170.765	1560.23	148	116.488	31.5119
cox2|Sample_M13	cox2|Sample_C026	0.149479	0.293783	0.508807	1590	320.075	1269.92	247	76.0726	170.927
cox2|Sample_M13	cox2|P.tetraurelia-Sample_291	0.260468	0.774227	0.336423	1635	464.423	1170.58	453	199.928	253.072
cox2|P.biaurelia-Sample_379	cox2|P.octaurelia-Sample_1038	0.0279404	1.25237	0.0223099	1701	523.475	1177.53	302	269.792	32.2082
cox2|P.biaurelia-Sample_379	cox2|P.caudatum-Sample_C104	0.085829	4.57174	0.0187738	1701	443.924	1257.08	446	344.429	101.571
cox2|P.biaurelia-Sample_379	cox2|P.multimicronucleatum-Sample_M04	0.103638	4.48127	0.023127	1701	393.48	1307.52	482	355.778	126.222
cox2|P.biaurelia-Sample_379	cox2|Sample_C026	0.0836211	4.54295	0.0184068	1701	427.205	1273.79	450	349.537	100.463
cox2|P.biaurelia-Sample_379	cox2|P.tetraurelia-Sample_291	0.0402616	1.14084	0.0352911	1701	517.144	1183.86	307	260.705	46.2947
cox2|P.octaurelia-Sample_1038	cox2|P.caudatum-Sample_C104	0.0911213	4.56133	0.0199769	1752	437.806	1314.19	457	344.532	112.468
cox2|P.octaurelia-Sample_1038	cox2|P.multimicronucleatum-Sample_M04	0.102002	4.51669	0.0225833	1740	412.507	1327.49	490	363.747	126.253
cox2|P.octaurelia-Sample_1038	cox2|Sample_C026	0.0876077	4.57339	0.0191559	1701	444.904	1256.1	455	351.45	103.55
cox2|P.octaurelia-Sample_1038	cox2|P.tetraurelia-Sample_291	0.0313732	0.867473	0.0361662	1776	490.141	1285.86	261	221.53	39.47
cox2|P.caudatum-Sample_C104	cox2|P.multimicronucleatum-Sample_M04	0.155609	0.281675	0.552442	1629	304.556	1324.44	255	69.9057	185.094
cox2|P.caudatum-Sample_C104	cox2|Sample_C026	0.0102492	1.87788	0.00545785	1701	225.793	1475.21	147	131.99	15.0096
cox2|P.caudatum-Sample_C104	cox2|P.tetraurelia-Sample_291	0.0903348	4.54418	0.0198792	1749	427.908	1321.09	457	344.768	112.232
cox2|P.multimicronucleatum-Sample_M04	cox2|Sample_C026	0.155016	0.257642	0.601671	1581	304.462	1276.54	243	65.273	177.727
cox2|P.multimicronucleatum-Sample_M04	cox2|P.tetraurelia-Sample_291	0.0986495	4.46897	0.0220743	1737	387.076	1349.92	487	362.426	124.574
cox2|Sample_C026	cox2|P.tetraurelia-Sample_291	0.0866834	4.52104	0.0191733	1701	414.908	1286.09	467	361.92	105.08
#Average Ka: 0.126538425278
#Average Ks: 5.06351548611
#Average KaKs: 0.545157600528