#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
nadh5|Sample_C026	nadh5|P.caudatum-Sample_C104	0.169449	0.0477216	3.55078	1806	637.903	1168.1	204	29.2044	174.796
nadh5|Sample_C026	nadh5|P.octaurelia-Sample_1038	0.631107	0.215618	2.92697	1788	512.028	1275.97	620	92.4659	527.534
nadh5|Sample_C026	nadh5|Sample_M13	0.389248	0.100479	3.87392	1695	497.762	1197.24	402	45.9599	356.04
nadh5|Sample_C026	nadh5|P.sexaurelia-Sample_130	0.675762	0.18901	3.57528	1782	530.746	1251.25	621	86.0079	534.992
nadh5|Sample_C026	nadh5|P.biaurelia-Sample_379	0.590021	0.216865	2.72069	1779	505.311	1273.69	594	91.246	502.754
nadh5|Sample_C026	nadh5|Sample_Peniche3I	0.350797	0.109725	3.19706	1692	471.262	1220.74	382	47.1484	334.852
nadh5|Sample_C026	nadh5|P.tetraurelia-Sample_291	0.662967	0.22497	2.94691	1785	500.937	1284.06	641	94.0572	546.943
nadh5|Sample_C026	nadh5|P.multimicronucleatum-Sample_M04	0.381412	0.127747	2.98568	1716	448.994	1267.01	421	51.4457	369.554
nadh5|P.caudatum-Sample_C104	nadh5|P.octaurelia-Sample_1038	0.649707	0.216408	3.00223	1788	507.322	1280.68	631	92.0552	538.945
nadh5|P.caudatum-Sample_C104	nadh5|Sample_M13	0.367295	0.105023	3.49727	1695	479.536	1215.46	392	46.1192	345.881
nadh5|P.caudatum-Sample_C104	nadh5|P.sexaurelia-Sample_130	0.611651	0.211267	2.89515	1785	515.655	1269.35	604	91.6411	512.359
nadh5|P.caudatum-Sample_C104	nadh5|P.biaurelia-Sample_379	0.58467	0.207666	2.81544	1782	502.691	1279.31	590	88.1527	501.847
nadh5|P.caudatum-Sample_C104	nadh5|Sample_Peniche3I	0.348147	0.112315	3.09975	1689	473.264	1215.74	380	48.3659	331.634
nadh5|P.caudatum-Sample_C104	nadh5|P.tetraurelia-Sample_291	0.682525	0.213492	3.19696	1794	501.105	1292.89	650	90.2074	559.793
nadh5|P.caudatum-Sample_C104	nadh5|P.multimicronucleatum-Sample_M04	0.35009	0.122117	2.86685	1719	433.226	1285.77	399	47.7057	351.294
nadh5|P.octaurelia-Sample_1038	nadh5|Sample_M13	0.703622	0.17811	3.95048	1722	501.87	1220.13	613	76.7968	536.203
nadh5|P.octaurelia-Sample_1038	nadh5|P.sexaurelia-Sample_130	0.381312	0.13256	2.87652	1800	509.518	1290.48	437	60.3106	376.689
nadh5|P.octaurelia-Sample_1038	nadh5|P.biaurelia-Sample_379	0.333634	0.107958	3.0904	1800	507.208	1292.79	390	49.8233	340.177
nadh5|P.octaurelia-Sample_1038	nadh5|Sample_Peniche3I	0.702159	0.190528	3.68534	1719	494.495	1224.51	617	80.0227	536.977
nadh5|P.octaurelia-Sample_1038	nadh5|P.tetraurelia-Sample_291	0.331757	0.142855	2.32233	1803	513.847	1289.15	403	65.6553	337.345
nadh5|P.octaurelia-Sample_1038	nadh5|P.multimicronucleatum-Sample_M04	0.742625	0.208065	3.56919	1722	504.326	1217.67	640	87.7569	552.243
nadh5|Sample_M13	nadh5|P.sexaurelia-Sample_130	0.198286	4.56792	0.0434083	1821	441.67	1379.33	609	370.027	238.973
nadh5|Sample_M13	nadh5|P.biaurelia-Sample_379	0.203009	4.59112	0.0442177	1821	455.545	1365.46	615	373.785	241.215
nadh5|Sample_M13	nadh5|Sample_Peniche3I	0.0208733	0.631922	0.0330314	1845	220.02	1624.98	115	81.6002	33.3998
nadh5|Sample_M13	nadh5|P.tetraurelia-Sample_291	0.235992	4.60737	0.0512206	1821	465.522	1355.48	666	393.283	272.717
nadh5|Sample_M13	nadh5|P.multimicronucleatum-Sample_M04	0.065564	3.87327	0.0169273	1812	174.926	1637.07	261	158.55	102.45
nadh5|P.sexaurelia-Sample_130	nadh5|P.biaurelia-Sample_379	0.364167	0.124873	2.91629	1803	505.094	1297.91	421	56.6403	364.36
nadh5|P.sexaurelia-Sample_130	nadh5|Sample_Peniche3I	0.712192	0.148535	4.79477	1701	509.748	1191.25	588	66.761	521.239
nadh5|P.sexaurelia-Sample_130	nadh5|P.tetraurelia-Sample_291	0.467727	0.192557	2.42903	1812	495.001	1317	530	82.1379	447.862
nadh5|P.sexaurelia-Sample_130	nadh5|P.multimicronucleatum-Sample_M04	0.69552	0.176504	3.94052	1725	516.014	1208.99	602	78.2041	523.796
nadh5|P.biaurelia-Sample_379	nadh5|Sample_Peniche3I	0.644105	0.172512	3.73368	1701	487.861	1213.14	576	72.6334	503.367
nadh5|P.biaurelia-Sample_379	nadh5|P.tetraurelia-Sample_291	0.402191	0.177727	2.26297	1803	494.58	1308.42	474	76.5504	397.45
nadh5|P.biaurelia-Sample_379	nadh5|P.multimicronucleatum-Sample_M04	0.644553	0.1969	3.27351	1713	493.52	1219.48	590	82.1283	507.872
nadh5|Sample_Peniche3I	nadh5|P.tetraurelia-Sample_291	0.243333	4.61362	0.0527424	1821	469.416	1351.58	672	392.989	279.011
nadh5|Sample_Peniche3I	nadh5|P.multimicronucleatum-Sample_M04	0.0669803	3.86935	0.0173105	1812	174.014	1637.99	261	156.371	104.629
nadh5|P.tetraurelia-Sample_291	nadh5|P.multimicronucleatum-Sample_M04	0.769627	0.20147	3.82006	1722	499.053	1222.95	650	84.5911	565.409
#Average Ks: 0.875726377778
#Average Ka: 0.454835461111
#Average KaKs: 2.61319133889