#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf84|Sample_Peniche3I	Ymf84|P.tetraurelia-Sample_291	0.808298	2.39505	0.337487	531	109.199	421.801	283	78.5384	204.462
Ymf84|Sample_Peniche3I	Ymf84|P.multimicronucleatum-Sample_M04	0.251331	1.22077	0.205878	531	51.5739	479.426	131	29.4757	101.524
Ymf84|Sample_Peniche3I	Ymf84|P.caudatum-Sample_C104	0.485991	2.92711	0.166031	516	49.542	466.458	203	39.3044	163.696
Ymf84|Sample_Peniche3I	Ymf84|P.sexaurelia-Sample_130	0.834307	1.77248	0.470702	531	114.878	416.122	285	78.05	206.95
Ymf84|Sample_Peniche3I	Ymf84|P.biaurelia-Sample_379	0.77665	3.50061	0.221861	525	106.429	418.571	287	88.5479	198.452
Ymf84|Sample_Peniche3I	Ymf84|Sample_C026	0.519119	2.98379	0.17398	525	53.4309	471.569	216	43.0344	172.966
Ymf84|Sample_Peniche3I	Ymf84|Sample_M13	0.0403363	0.808905	0.0498653	549	55.9578	493.042	43	23.7018	19.2982
Ymf84|Sample_Peniche3I	Ymf84|P.octaurelia-Sample_1038	0.751538	3.49261	0.215179	528	105.3	422.7	285	87.111	197.889
Ymf84|P.tetraurelia-Sample_291	Ymf84|P.multimicronucleatum-Sample_M04	0.792074	1.78464	0.443827	525	112.687	412.313	274	76.6899	197.31
Ymf84|P.tetraurelia-Sample_291	Ymf84|P.caudatum-Sample_C104	0.686708	3.49303	0.196594	516	105.358	410.642	265	83.3734	181.627
Ymf84|P.tetraurelia-Sample_291	Ymf84|P.sexaurelia-Sample_130	0.234822	1.90015	0.123581	540	127.566	412.434	171	88.0801	82.9199
Ymf84|P.tetraurelia-Sample_291	Ymf84|P.biaurelia-Sample_379	0.165927	1.47217	0.112709	537	136.322	400.678	147	87.8817	59.1183
Ymf84|P.tetraurelia-Sample_291	Ymf84|Sample_C026	0.753748	3.54335	0.212722	522	112.671	409.329	279	87.9519	191.048
Ymf84|P.tetraurelia-Sample_291	Ymf84|Sample_M13	0.793867	3.52765	0.225041	531	110.337	420.663	285	82.953	202.047
Ymf84|P.tetraurelia-Sample_291	Ymf84|P.octaurelia-Sample_1038	0.150131	1.18616	0.126569	540	147.359	392.641	128	74.8914	53.1086
Ymf84|P.multimicronucleatum-Sample_M04	Ymf84|P.caudatum-Sample_C104	0.484558	1.74821	0.277174	513	51.3758	461.624	193	30.798	162.202
Ymf84|P.multimicronucleatum-Sample_M04	Ymf84|P.sexaurelia-Sample_130	0.764974	1.46047	0.523786	525	113.53	411.47	268	73.0003	195
Ymf84|P.multimicronucleatum-Sample_M04	Ymf84|P.biaurelia-Sample_379	0.779418	1.60248	0.486381	519	114.3	404.7	267	75.6049	191.395
Ymf84|P.multimicronucleatum-Sample_M04	Ymf84|Sample_C026	0.496152	4.04824	0.12256	522	53.7947	468.205	207	40.1634	166.837
Ymf84|P.multimicronucleatum-Sample_M04	Ymf84|Sample_M13	0.241213	1.30542	0.184779	531	52.2508	478.749	129	31.0215	97.9785
Ymf84|P.multimicronucleatum-Sample_M04	Ymf84|P.octaurelia-Sample_1038	0.772968	1.71787	0.449957	522	111.112	410.888	270	74.8995	195.101
Ymf84|P.caudatum-Sample_C104	Ymf84|P.sexaurelia-Sample_130	0.687357	1.49847	0.458706	516	115.006	400.994	253	74.5576	178.442
Ymf84|P.caudatum-Sample_C104	Ymf84|P.biaurelia-Sample_379	0.692013	2.07394	0.333671	519	107.542	411.458	258	75.5787	182.421
Ymf84|P.caudatum-Sample_C104	Ymf84|Sample_C026	0.153814	1.16219	0.132349	528	66.26	461.74	103	39.143	63.857
Ymf84|P.caudatum-Sample_C104	Ymf84|Sample_M13	0.461979	2.92986	0.15768	516	49.7234	466.277	197	39.1771	157.823
Ymf84|P.caudatum-Sample_C104	Ymf84|P.octaurelia-Sample_1038	0.715408	3.49733	0.204558	513	105.965	407.035	268	82.6252	185.375
Ymf84|P.sexaurelia-Sample_130	Ymf84|P.biaurelia-Sample_379	0.190753	0.970575	0.196536	534	136.613	397.387	135	68.5955	66.4045
Ymf84|P.sexaurelia-Sample_130	Ymf84|Sample_C026	0.652841	3.48239	0.187469	519	109.466	409.534	258	81.3093	176.691
Ymf84|P.sexaurelia-Sample_130	Ymf84|Sample_M13	0.820525	1.33499	0.61463	531	117.58	413.42	277	73.3137	203.686
Ymf84|P.sexaurelia-Sample_130	Ymf84|P.octaurelia-Sample_1038	0.226342	1.28549	0.176074	537	126.915	410.085	158	78.0389	79.9611
Ymf84|P.biaurelia-Sample_379	Ymf84|Sample_C026	0.71061	2.257	0.314847	516	108.336	407.664	261	77.2442	183.756
Ymf84|P.biaurelia-Sample_379	Ymf84|Sample_M13	0.785153	3.50371	0.224092	525	106.87	418.13	285	85.5107	199.489
Ymf84|P.biaurelia-Sample_379	Ymf84|P.octaurelia-Sample_1038	0.185889	1.33924	0.138802	534	140.896	393.104	152	87.9521	64.0479
Ymf84|Sample_C026	Ymf84|Sample_M13	0.506217	2.96424	0.170774	525	52.0562	472.944	212	41.7179	170.282
Ymf84|Sample_C026	Ymf84|P.octaurelia-Sample_1038	0.754985	3.52688	0.214066	519	110.223	408.777	278	85.7629	192.237
Ymf84|Sample_M13	Ymf84|P.octaurelia-Sample_1038	0.781707	3.51129	0.222627	528	107.955	420.045	286	84.8824	201.118
#Average Ka: 0.553047869444
#Average Ks: 2.31191
#Average KaKs: 0.252042897222