#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf83|Sample_Peniche3I	Ymf83|Sample_C026	0.304083	1.2735	0.238777	468	103.453	364.547	147	56.8429	90.1571
Ymf83|Sample_Peniche3I	Ymf83|P.tetraurelia-Sample_291	0.453437	2.27819	0.199034	480	133.442	346.558	212	95.2823	116.718
Ymf83|Sample_Peniche3I	Ymf83|P.octaurelia-Sample_1038	0.425708	1.66466	0.255733	477	131.25	345.75	199	87.7411	111.259
Ymf83|Sample_Peniche3I	Ymf83|P.multimicronucleatum-Sample_M04	0.0923695	0.698217	0.132293	480	68.642	411.358	64	28.4265	35.5735
Ymf83|Sample_Peniche3I	Ymf83|P.sexaurelia-Sample_130	0.449794	1.25493	0.35842	474	140.437	333.563	197	85.5642	111.436
Ymf83|Sample_Peniche3I	Ymf83|P.biaurelia-Sample_379	0.458648	2.66286	0.172239	477	140.691	336.309	217	102.489	114.511
Ymf83|Sample_Peniche3I	Ymf83|P.caudatum-Sample_C104	0.346573	1.60634	0.215753	471	100.348	370.652	158	56.365	101.635
Ymf83|Sample_C026	Ymf83|P.tetraurelia-Sample_291	0.460559	1.68529	0.273281	543	141.367	401.633	232	94.8173	137.183
Ymf83|Sample_C026	Ymf83|P.octaurelia-Sample_1038	0.369253	2.28244	0.16178	510	132.33	377.67	204	94.5153	109.485
Ymf83|Sample_C026	Ymf83|P.multimicronucleatum-Sample_M04	0.348655	1.02671	0.339583	477	103.81	373.19	155	52.2979	102.702
Ymf83|Sample_C026	Ymf83|P.sexaurelia-Sample_130	0.341562	3.62841	0.0941354	498	126.202	371.798	203	101.467	101.533
Ymf83|Sample_C026	Ymf83|P.biaurelia-Sample_379	0.372481	3.64345	0.102233	471	128.758	342.242	197	97.0837	99.9163
Ymf83|Sample_C026	Ymf83|P.caudatum-Sample_C104	0.129831	0.691464	0.187763	531	123.417	407.583	99	50.6467	48.3533
Ymf83|P.tetraurelia-Sample_291	Ymf83|P.octaurelia-Sample_1038	0.241221	0.208089	1.15922	513	170.145	342.855	99	30.667	68.333
Ymf83|P.tetraurelia-Sample_291	Ymf83|P.multimicronucleatum-Sample_M04	0.808103	0.719385	1.12332	456	125.116	330.884	209	52.5718	156.428
Ymf83|P.tetraurelia-Sample_291	Ymf83|P.sexaurelia-Sample_130	0.290994	0.24547	1.18546	483	167.567	315.433	108	34.6212	73.3788
Ymf83|P.tetraurelia-Sample_291	Ymf83|P.biaurelia-Sample_379	0.277536	0.212086	1.3086	465	160.871	304.129	98	29.1787	68.8213
Ymf83|P.tetraurelia-Sample_291	Ymf83|P.caudatum-Sample_C104	0.809668	0.64127	1.2626	498	144.269	353.731	227	58.4038	168.596
Ymf83|P.octaurelia-Sample_1038	Ymf83|P.multimicronucleatum-Sample_M04	0.944365	0.290318	3.25287	456	113.427	342.573	202	25.6486	176.351
Ymf83|P.octaurelia-Sample_1038	Ymf83|P.sexaurelia-Sample_130	0.371136	0.123363	3.00849	492	140.298	351.702	115	15.5816	99.4184
Ymf83|P.octaurelia-Sample_1038	Ymf83|P.biaurelia-Sample_379	0.286265	0.100066	2.86077	477	136.241	340.759	92	12.5698	79.4302
Ymf83|P.octaurelia-Sample_1038	Ymf83|P.caudatum-Sample_C104	0.753751	0.33995	2.21724	498	126.396	371.604	204	32.7492	171.251
Ymf83|P.multimicronucleatum-Sample_M04	Ymf83|P.sexaurelia-Sample_130	0.460644	1.40865	0.327011	489	134.359	354.641	206	85.3653	120.635
Ymf83|P.multimicronucleatum-Sample_M04	Ymf83|P.biaurelia-Sample_379	0.436437	3.67527	0.11875	471	134.338	336.662	215	104.704	110.296
Ymf83|P.multimicronucleatum-Sample_M04	Ymf83|P.caudatum-Sample_C104	0.358031	1.36519	0.262258	477	94.739	382.261	167	59.5445	107.455
Ymf83|P.sexaurelia-Sample_130	Ymf83|P.biaurelia-Sample_379	0.13034	1.49769	0.087027	480	121.735	358.265	108	65.4577	42.5423
Ymf83|P.sexaurelia-Sample_130	Ymf83|P.caudatum-Sample_C104	0.380975	1.65297	0.23048	495	134.919	360.081	197	90.0212	106.979
Ymf83|P.biaurelia-Sample_379	Ymf83|P.caudatum-Sample_C104	0.377909	3.6423	0.103756	471	128.56	342.44	203	101.977	101.023
#Average Ks: 1.44709028571
#Average Ka: 0.410011732143
#Average KaKs: 0.7585313