#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf79|Sample_Peniche3I	Ymf79|P.tetraurelia-Sample_291	0.532547	0.939178	0.567035	195	65.6218	129.378	78	29.8162	48.1838
Ymf79|Sample_Peniche3I	Ymf79|P.multimicronucleatum-Sample_M04	0.161214	0.391483	0.411805	297	54.309	242.691	51	16.2676	34.7324
Ymf79|Sample_Peniche3I	Ymf79|P.caudatum-Sample_C104	0.372641	0.70482	0.528704	207	33.0066	173.993	64	14.4202	49.5798
Ymf79|Sample_Peniche3I	Ymf79|P.sexaurelia-Sample_130	0.448745	0.826771	0.542768	195	68.274	126.726	72	30.3543	41.6457
Ymf79|Sample_Peniche3I	Ymf79|P.biaurelia-Sample_379	0.488774	0.923426	0.529305	195	49.9394	145.061	73	22.2905	50.7095
Ymf79|Sample_Peniche3I	Ymf79|Sample_C026	0.363651	0.679888	0.53487	207	41.1144	165.886	64	17.4325	46.5675
Ymf79|Sample_Peniche3I	Ymf79|Sample_M13	0.123362	0.221307	0.557425	234	58.0226	175.977	30	10.1683	19.8317
Ymf79|Sample_Peniche3I	Ymf79|P.octaurelia-Sample_1038	0.565274	0.915839	0.617219	195	66.4348	128.565	79	29.3405	49.6595
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.multimicronucleatum-Sample_M04	0.436275	1.22938	0.354875	204	53.7223	150.278	81	32.4695	48.5305
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.caudatum-Sample_C104	0.442782	1.58239	0.279818	207	52.477	154.523	85	34.5854	50.4146
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.sexaurelia-Sample_130	0.0720147	2.84028	0.0253548	207	44.1257	162.874	51	39.8458	11.1542
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.biaurelia-Sample_379	0.125094	2.55199	0.0490183	207	57.3226	149.677	50	32.8411	17.1589
Ymf79|P.tetraurelia-Sample_291	Ymf79|Sample_C026	0.471107	1.30561	0.360833	207	61.4356	145.564	83	32.9896	50.0104
Ymf79|P.tetraurelia-Sample_291	Ymf79|Sample_M13	0.642169	0.678995	0.945763	195	70.5873	124.413	80	27.768	52.232
Ymf79|P.tetraurelia-Sample_291	Ymf79|P.octaurelia-Sample_1038	0.0327066	0.544104	0.0601109	207	50.6043	156.396	23	18	5
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.caudatum-Sample_C104	0.386267	1.33364	0.289633	222	25.2558	196.744	70	13.438	56.562
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.sexaurelia-Sample_130	0.421085	0.905767	0.464893	204	60.1445	143.855	71	25.9654	45.0346
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.biaurelia-Sample_379	0.419295	1.03761	0.404097	204	44.0183	159.982	71	21.0192	49.9808
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|Sample_C026	0.392361	1.08876	0.360376	222	34.4277	187.572	74	18.5951	55.4049
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|Sample_M13	0.208477	0.398389	0.523301	234	49.0595	184.941	48	14.7132	33.2868
Ymf79|P.multimicronucleatum-Sample_M04	Ymf79|P.octaurelia-Sample_1038	0.42561	1.54329	0.27578	204	53.181	150.819	76	28.1534	47.8466
Ymf79|P.caudatum-Sample_C104	Ymf79|P.sexaurelia-Sample_130	0.486302	0.795164	0.611575	207	63.122	143.878	76	26.1989	49.8011
Ymf79|P.caudatum-Sample_C104	Ymf79|P.biaurelia-Sample_379	0.566628	1.59967	0.354215	207	48.6859	158.314	87	26.3214	60.6786
Ymf79|P.caudatum-Sample_C104	Ymf79|Sample_C026	0.150573	0.391355	0.384749	225	54.4171	170.583	39	15.9849	23.0151
Ymf79|P.caudatum-Sample_C104	Ymf79|Sample_M13	0.371718	0.572081	0.649765	207	35.1924	171.808	62	13.3677	48.6323
Ymf79|P.caudatum-Sample_C104	Ymf79|P.octaurelia-Sample_1038	0.485019	1.22528	0.395844	207	58.7579	148.242	87	35.466	51.534
Ymf79|P.sexaurelia-Sample_130	Ymf79|P.biaurelia-Sample_379	0.112565	3.13109	0.0359507	207	51.193	155.807	54	37.8043	16.1957
Ymf79|P.sexaurelia-Sample_130	Ymf79|Sample_C026	0.514697	0.799328	0.643912	207	67.933	139.067	80	29.5728	50.4272
Ymf79|P.sexaurelia-Sample_130	Ymf79|Sample_M13	0.632741	0.590735	1.07111	195	75.5716	119.428	77	27.9846	49.0154
Ymf79|P.sexaurelia-Sample_130	Ymf79|P.octaurelia-Sample_1038	0.105213	0.6859	0.153393	207	73.1153	133.885	44	30.9635	13.0365
Ymf79|P.biaurelia-Sample_379	Ymf79|Sample_C026	0.540666	0.650205	0.831531	207	58.4777	148.522	80	24.2336	55.7664
Ymf79|P.biaurelia-Sample_379	Ymf79|Sample_M13	0.541479	0.912644	0.593308	195	54.6058	140.394	77	24.3053	52.6947
Ymf79|P.biaurelia-Sample_379	Ymf79|P.octaurelia-Sample_1038	0.130278	0.663134	0.196458	207	69.0223	137.978	44	27.6623	16.3377
Ymf79|Sample_C026	Ymf79|Sample_M13	0.400877	0.583213	0.68736	207	49.8629	157.137	67	19.4791	47.5209
Ymf79|Sample_C026	Ymf79|P.octaurelia-Sample_1038	0.530987	0.743052	0.714603	207	67.5329	139.467	81	29.1467	51.8533
Ymf79|Sample_M13	Ymf79|P.octaurelia-Sample_1038	0.678422	0.581961	1.16575	195	70.5333	124.467	79	25.3226	53.6774
#Average Ks: 1.01577025
#Average Ka: 0.382767119444
#Average KaKs: 0.477014102778