#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf68|P.tetraurelia-Sample_291	Ymf68|Sample_M13	0.145539	4.1344	0.035202	1161	247.778	913.222	339	219.213	119.787
Ymf68|P.tetraurelia-Sample_291	Ymf68|Sample_Peniche3I	0.143322	4.1023	0.034937	1161	237.398	923.602	337	217.549	119.451
Ymf68|P.tetraurelia-Sample_291	Ymf68|P.caudatum-Sample_C104	0.150789	1.92644	0.0782733	1161	297.826	863.174	323	206.249	116.751
Ymf68|P.tetraurelia-Sample_291	Ymf68|Sample_C026	0.142689	1.90084	0.0750663	1161	289.213	871.787	312	199.708	112.292
Ymf68|P.tetraurelia-Sample_291	Ymf68|P.octaurelia-Sample_1038	0.0427753	1.0665	0.0401082	1161	373.412	787.588	208	175.37	32.6303
Ymf68|P.tetraurelia-Sample_291	Ymf68|P.multimicronucleatum-Sample_M04	0.145995	4.16807	0.035027	1161	259.157	901.843	325	206.539	118.461
Ymf68|P.tetraurelia-Sample_291	Ymf68|P.sexaurelia-Sample_130	0.0375394	1.14006	0.0329276	1161	376.973	784.027	215	186.393	28.6069
Ymf68|P.tetraurelia-Sample_291	Ymf68|P.biaurelia-Sample_379	0.0442596	0.77664	0.0569886	1161	385.764	775.236	199	165.815	33.1848
Ymf68|Sample_M13	Ymf68|Sample_Peniche3I	0.0090712	0.741668	0.0122308	1161	157.902	1003.1	75	65.9613	9.0387
Ymf68|Sample_M13	Ymf68|P.caudatum-Sample_C104	0.127633	2.51522	0.0507445	1161	157.777	1003.22	231	114.196	116.804
Ymf68|Sample_M13	Ymf68|Sample_C026	0.125863	3.68831	0.0341247	1161	136.695	1024.31	224	106.207	117.793
Ymf68|Sample_M13	Ymf68|P.octaurelia-Sample_1038	0.149921	4.08371	0.0367118	1161	231.586	929.414	321	195.695	125.305
Ymf68|Sample_M13	Ymf68|P.multimicronucleatum-Sample_M04	0.0499052	1.59913	0.0312078	1161	138.871	1022.13	141	91.8029	49.1971
Ymf68|Sample_M13	Ymf68|P.sexaurelia-Sample_130	0.148105	4.14646	0.0357183	1161	251.795	909.205	330	208.708	121.292
Ymf68|Sample_M13	Ymf68|P.biaurelia-Sample_379	0.155638	4.13345	0.0376532	1161	247.465	913.535	333	205.692	127.308
Ymf68|Sample_Peniche3I	Ymf68|P.caudatum-Sample_C104	0.125759	3.40858	0.0368948	1161	150.971	1010.03	228	112.025	115.975
Ymf68|Sample_Peniche3I	Ymf68|Sample_C026	0.127043	3.65919	0.0347189	1161	131.488	1029.51	229	109.634	119.366
Ymf68|Sample_Peniche3I	Ymf68|P.octaurelia-Sample_1038	0.141236	4.04074	0.034953	1161	218.689	942.311	314	193.662	120.338
Ymf68|Sample_Peniche3I	Ymf68|P.multimicronucleatum-Sample_M04	0.0527564	4.21607	0.0125132	1161	128.316	1032.68	135	82.5626	52.4374
Ymf68|Sample_Peniche3I	Ymf68|P.sexaurelia-Sample_130	0.143846	4.09576	0.0351207	1161	235.336	925.664	326	205.78	120.22
Ymf68|Sample_Peniche3I	Ymf68|P.biaurelia-Sample_379	0.147178	4.10153	0.0358836	1161	237.155	923.845	315	192.574	122.426
Ymf68|P.caudatum-Sample_C104	Ymf68|Sample_C026	0.0276304	1.12533	0.0245531	1164	209.822	954.178	133	107.17	25.8301
Ymf68|P.caudatum-Sample_C104	Ymf68|P.octaurelia-Sample_1038	0.15211	1.67116	0.091021	1161	282.828	878.172	309	189.271	119.729
Ymf68|P.caudatum-Sample_C104	Ymf68|P.multimicronucleatum-Sample_M04	0.129988	3.14248	0.0413649	1161	149.334	1011.67	230	110.304	119.696
Ymf68|P.caudatum-Sample_C104	Ymf68|P.sexaurelia-Sample_130	0.13585	3.07186	0.0442241	1161	281.481	879.519	316	207.597	108.403
Ymf68|P.caudatum-Sample_C104	Ymf68|P.biaurelia-Sample_379	0.152901	1.46799	0.104157	1161	291.905	869.095	307	188.008	118.992
Ymf68|Sample_C026	Ymf68|P.octaurelia-Sample_1038	0.148572	1.94055	0.0765618	1161	265.897	895.103	304	184.423	119.577
Ymf68|Sample_C026	Ymf68|P.multimicronucleatum-Sample_M04	0.126802	3.65422	0.0347001	1161	130.62	1030.38	229	109.766	119.234
Ymf68|Sample_C026	Ymf68|P.sexaurelia-Sample_130	0.132014	4.16915	0.0316645	1161	259.527	901.473	307	198.673	108.327
Ymf68|Sample_C026	Ymf68|P.biaurelia-Sample_379	0.15455	1.58487	0.0975163	1161	294.261	866.739	314	194.023	119.977
Ymf68|P.octaurelia-Sample_1038	Ymf68|P.multimicronucleatum-Sample_M04	0.140022	4.08182	0.0343039	1161	231.002	929.998	314	196.255	117.745
Ymf68|P.octaurelia-Sample_1038	Ymf68|P.sexaurelia-Sample_130	0.028375	1.48081	0.0191619	1161	285.935	875.065	209	184.676	24.3237
Ymf68|P.octaurelia-Sample_1038	Ymf68|P.biaurelia-Sample_379	0.0388089	0.888553	0.0436765	1161	373.76	787.24	199	169.342	29.6575
Ymf68|P.multimicronucleatum-Sample_M04	Ymf68|P.sexaurelia-Sample_130	0.138693	4.1142	0.0337109	1161	241.195	919.805	319	203.497	115.503
Ymf68|P.multimicronucleatum-Sample_M04	Ymf68|P.biaurelia-Sample_379	0.141843	4.12481	0.0343878	1161	244.628	916.372	307	189.607	117.393
Ymf68|P.sexaurelia-Sample_130	Ymf68|P.biaurelia-Sample_379	0.0315954	0.719187	0.0439321	1161	433.939	727.061	202	179.61	22.39
#Average Ks: 2.80227938889
#Average Ka: 0.112128272222
#Average KaKs: 0.0436650333333