#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf66|Sample_C026	Ymf66|P.octaurelia-Sample_1038	0.114741	4.31689	0.0265795	1278	316.035	961.965	352	250.037	101.963
Ymf66|Sample_C026	Ymf66|Sample_Peniche3I	0.149824	3.78846	0.0395475	1248	156.222	1091.78	275	127.706	147.294
Ymf66|Sample_C026	Ymf66|P.tetraurelia-Sample_291	0.137399	2.70185	0.0508536	1278	317.96	960.04	352	231.97	120.03
Ymf66|Sample_C026	Ymf66|P.multimicronucleatum-Sample_M04	0.139406	3.69952	0.0376821	1221	138.753	1082.25	257	120.185	136.815
Ymf66|Sample_C026	Ymf66|P.caudatum-Sample_C104	0.02487	0.698045	0.035628	1278	197.321	1080.68	107	80.5946	26.4054
Ymf66|Sample_C026	Ymf66|Sample_M13	0.144457	3.81524	0.0378631	1248	161.902	1086.1	273	131.195	141.805
Ymf66|Sample_C026	Ymf66|P.sexaurelia-Sample_130	0.121274	3.70934	0.0326942	1278	291.376	986.624	327	216.978	110.022
Ymf66|Sample_C026	Ymf66|P.biaurelia-Sample_379	0.124069	4.27436	0.0290264	1278	298.611	979.389	344	232.523	111.477
Ymf66|P.octaurelia-Sample_1038	Ymf66|Sample_Peniche3I	0.144146	4.15304	0.0347086	1251	254.013	996.987	378	247.859	130.141
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.tetraurelia-Sample_291	0.0635214	0.692441	0.0917355	1284	419.69	864.31	221	168.496	52.5043
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.multimicronucleatum-Sample_M04	0.150253	4.23958	0.0354405	1224	285.08	938.92	361	233.764	127.236
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.caudatum-Sample_C104	0.111386	4.28763	0.0259785	1278	303.942	974.058	346	245.515	100.485
Ymf66|P.octaurelia-Sample_1038	Ymf66|Sample_M13	0.144343	4.16886	0.0346242	1251	259.428	991.572	358	228.39	129.61
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.sexaurelia-Sample_130	0.044474	1.15954	0.0383549	1284	403.655	880.345	245	207.057	37.9431
Ymf66|P.octaurelia-Sample_1038	Ymf66|P.biaurelia-Sample_379	0.03923	0.713117	0.055012	1284	428.427	855.573	211	178.386	32.6142
Ymf66|Sample_Peniche3I	Ymf66|P.tetraurelia-Sample_291	0.492209	0.213522	2.30519	1158	310.824	847.176	352	55.1411	296.859
Ymf66|Sample_Peniche3I	Ymf66|P.multimicronucleatum-Sample_M04	0.146852	0.0658352	2.2306	1101	306.485	794.515	124	19.1312	104.869
Ymf66|Sample_Peniche3I	Ymf66|P.caudatum-Sample_C104	0.274904	0.173746	1.58221	1107	263.724	843.276	232	39.9017	192.098
Ymf66|Sample_Peniche3I	Ymf66|Sample_M13	0.0749666	0.0151543	4.94689	1167	399.941	767.059	60	6	54
Ymf66|Sample_Peniche3I	Ymf66|P.sexaurelia-Sample_130	0.414289	0.229608	1.80433	1161	305.507	855.493	325	57.6136	267.386
Ymf66|Sample_Peniche3I	Ymf66|P.biaurelia-Sample_379	0.429371	0.233504	1.83882	1164	302.794	861.206	333	57.241	275.759
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.multimicronucleatum-Sample_M04	0.161578	4.26851	0.0378536	1224	296.292	927.708	373	238.807	134.193
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.caudatum-Sample_C104	0.133201	2.40663	0.0553474	1278	311.979	966.021	342	224.53	117.47
Ymf66|P.tetraurelia-Sample_291	Ymf66|Sample_M13	0.162722	4.24394	0.0383422	1272	286.744	985.256	371	227.578	143.422
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.sexaurelia-Sample_130	0.0748788	0.836473	0.0895173	1329	438.749	890.251	261	197.885	63.1155
Ymf66|P.tetraurelia-Sample_291	Ymf66|P.biaurelia-Sample_379	0.0721667	0.804923	0.0896567	1332	446.529	885.471	259	198.398	60.6021
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|P.caudatum-Sample_C104	0.137557	3.76752	0.0365113	1221	151.92	1069.08	250	116.432	133.568
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|Sample_M13	0.0407807	1.81437	0.0224765	1224	154.659	1069.34	148	105.671	42.3287
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|P.sexaurelia-Sample_130	0.151573	4.15735	0.036459	1224	255.478	968.522	359	226.769	132.231
Ymf66|P.multimicronucleatum-Sample_M04	Ymf66|P.biaurelia-Sample_379	0.156041	4.22297	0.0369506	1224	278.838	945.162	380	247.653	132.347
Ymf66|P.caudatum-Sample_C104	Ymf66|Sample_M13	0.142937	3.81578	0.0374594	1248	162.019	1085.98	270	129.576	140.424
Ymf66|P.caudatum-Sample_C104	Ymf66|P.sexaurelia-Sample_130	0.116781	4.22245	0.0276573	1278	278.644	999.356	329	221.312	107.688
Ymf66|P.caudatum-Sample_C104	Ymf66|P.biaurelia-Sample_379	0.121859	4.24247	0.0287236	1278	286.181	991.819	362	250.939	111.061
Ymf66|Sample_M13	Ymf66|P.sexaurelia-Sample_130	0.394738	0.212616	1.85658	1164	315.524	848.476	312	55.9919	256.008
Ymf66|Sample_M13	Ymf66|P.biaurelia-Sample_379	0.428174	0.242685	1.76432	1164	311.233	852.767	333	60.7741	272.226
Ymf66|P.sexaurelia-Sample_130	Ymf66|P.biaurelia-Sample_379	0.234565	0.0697525	3.36281	1242	275.72	966.28	208	18	190
#Average Ks: 2.4077145
#Average Ka: 0.167098255556
#Average KaKs: 0.634289819444