#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf65|Sample_C026	Ymf65|P.caudatum-Sample_C104	0.058911	0.376942	0.156286	402	92.0782	309.922	43	25.5782	17.4218
Ymf65|Sample_C026	Ymf65|Sample_M13	0.225995	2.76557	0.0817176	1110	118.48	991.52	276	86.6354	189.365
Ymf65|Sample_C026	Ymf65|Sample_Peniche3I	0.195962	3.58623	0.054643	1092	119.299	972.701	257	92.4791	164.521
Ymf65|Sample_C026	Ymf65|P.octaurelia-Sample_1038	0.330421	1.26731	0.260726	1110	378.618	731.382	423	231.553	191.447
Ymf65|Sample_C026	Ymf65|P.biaurelia-Sample_379	0.308843	1.5085	0.204735	1092	384.687	707.313	426	249.909	176.091
Ymf65|Sample_C026	Ymf65|P.multimicronucleatum-Sample_M04	0.224948	3.51129	0.0640642	1107	107.955	999.045	276	86.1756	189.824
Ymf65|Sample_C026	Ymf65|P.sexaurelia-Sample_130	0.284658	1.19939	0.237335	1092	383.344	708.656	394	229.414	164.586
Ymf65|P.caudatum-Sample_C104	Ymf65|Sample_M13	0.336562	0.895216	0.375956	402	70.9194	331.081	119	31.5919	87.4081
Ymf65|P.caudatum-Sample_C104	Ymf65|Sample_Peniche3I	0.296712	0.81553	0.363827	399	66.0222	332.978	107	27.857	79.143
Ymf65|P.caudatum-Sample_C104	Ymf65|P.octaurelia-Sample_1038	0.511053	0.826608	0.618253	402	176.732	225.268	154	73.9711	80.0289
Ymf65|P.caudatum-Sample_C104	Ymf65|P.biaurelia-Sample_379	0.506618	1.21941	0.415463	399	178.082	220.918	165	85.8426	79.1574
Ymf65|P.caudatum-Sample_C104	Ymf65|P.multimicronucleatum-Sample_M04	0.323248	1.64816	0.196126	402	58.3973	343.603	117	29.8726	87.1274
Ymf65|P.caudatum-Sample_C104	Ymf65|P.sexaurelia-Sample_130	0.534825	0.783196	0.682876	399	181.009	217.991	151	71.4386	79.5614
Ymf65|Sample_M13	Ymf65|Sample_Peniche3I	0.0389477	0.534452	0.0728741	1092	168.197	923.803	93	58.0956	34.9044
Ymf65|Sample_M13	Ymf65|P.octaurelia-Sample_1038	0.434326	1.4695	0.295561	1119	369.899	749.101	480	238.32	241.68
Ymf65|Sample_M13	Ymf65|P.biaurelia-Sample_379	0.415449	1.36719	0.303872	1092	377.144	714.856	461	237.161	223.839
Ymf65|Sample_M13	Ymf65|P.multimicronucleatum-Sample_M04	0.128265	1.7194	0.0745987	1107	119.441	987.559	190	74.7306	115.269
Ymf65|Sample_M13	Ymf65|P.sexaurelia-Sample_130	0.39408	1.22007	0.322997	1092	361.435	730.565	437	217.793	219.207
Ymf65|Sample_Peniche3I	Ymf65|P.octaurelia-Sample_1038	0.390118	1.49665	0.26066	1092	367.772	724.228	454	238.333	215.667
Ymf65|Sample_Peniche3I	Ymf65|P.biaurelia-Sample_379	0.386243	1.44878	0.266599	1092	383.878	708.122	456	246.19	209.81
Ymf65|Sample_Peniche3I	Ymf65|P.multimicronucleatum-Sample_M04	0.123358	2.88954	0.0426913	1092	119.707	972.293	181	71.4395	109.56
Ymf65|Sample_Peniche3I	Ymf65|P.sexaurelia-Sample_130	0.366672	1.36936	0.26777	1092	361.598	730.402	435	227.512	207.488
Ymf65|P.octaurelia-Sample_1038	Ymf65|P.biaurelia-Sample_379	0.0776293	0.858348	0.0904403	1092	318.724	773.276	201	144.232	56.7675
Ymf65|P.octaurelia-Sample_1038	Ymf65|P.multimicronucleatum-Sample_M04	0.393037	2.30823	0.170277	1107	344.543	762.457	475	246.503	228.497
Ymf65|P.octaurelia-Sample_1038	Ymf65|P.sexaurelia-Sample_130	0.0972709	1.16167	0.083734	1092	337.577	754.423	236	167.534	68.4661
Ymf65|P.biaurelia-Sample_379	Ymf65|P.multimicronucleatum-Sample_M04	0.406426	1.9375	0.209768	1092	354.491	737.509	473	245.79	227.21
Ymf65|P.biaurelia-Sample_379	Ymf65|P.sexaurelia-Sample_130	0.084856	1.93603	0.0438298	1092	336.12	755.88	245	184.644	60.3558
Ymf65|P.multimicronucleatum-Sample_M04	Ymf65|P.sexaurelia-Sample_130	0.38321	1.71761	0.223107	1092	337.213	754.787	449	227.302	221.698
#Average Ks: 1.5656315
#Average Ka: 0.294951567857
#Average KaKs: 0.230028107143