#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf59|P.biaurelia-Sample_379	Ymf59|P.multimicronucleatum-Sample_M04	0.720624	1.13146	0.636896	306	73.7862	232.214	149	43.0977	105.902
Ymf59|P.biaurelia-Sample_379	Ymf59|P.caudatum-Sample_C104	0.704379	2.40674	0.292669	321	84.7707	236.229	156	51.4659	104.534
Ymf59|P.biaurelia-Sample_379	Ymf59|Sample_C026	0.619681	1.30908	0.473371	318	77.631	240.369	148	48.0594	99.9406
Ymf59|P.biaurelia-Sample_379	Ymf59|Sample_M13	0.812067	1.85069	0.438791	306	80.4096	225.59	154	44.4445	109.556
Ymf59|P.biaurelia-Sample_379	Ymf59|P.octaurelia-Sample_1038	0.280934	0.39615	0.70916	324	92.2579	231.742	81	27.0921	53.9079
Ymf59|P.biaurelia-Sample_379	Ymf59|P.sexaurelia-Sample_130	0.289062	0.539317	0.535978	327	90.5623	236.438	90	33.8203	56.1797
Ymf59|P.biaurelia-Sample_379	Ymf59|P.tetraurelia-Sample_291	0.194544	0.448348	0.433912	321	88.4152	232.585	68	28.3035	39.6965
Ymf59|P.biaurelia-Sample_379	Ymf59|Sample_Peniche3I	0.73906	1.01695	0.726741	306	78.9671	227.033	144	39.3966	104.603
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|P.caudatum-Sample_C104	0.557501	0.527012	1.05785	315	54.9623	260.038	121	20.3814	100.619
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|Sample_C026	0.48983	0.604728	0.81	312	51.2244	260.776	113	20.2696	92.7304
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|Sample_M13	0.131617	0.493965	0.266451	336	50.6725	285.328	52	17.7372	34.2628
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|P.octaurelia-Sample_1038	0.697133	1.11799	0.623557	297	75.316	221.684	143	43.7648	99.2352
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|P.sexaurelia-Sample_130	0.73177	1.29673	0.56432	300	72.7684	227.232	149	44.8908	104.109
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|P.tetraurelia-Sample_291	0.771695	1.71897	0.448929	294	78.3108	215.689	145	43.1894	101.811
Ymf59|P.multimicronucleatum-Sample_M04	Ymf59|Sample_Peniche3I	0.126546	0.693298	0.182528	336	50.3905	285.609	55	21.8953	33.1047
Ymf59|P.caudatum-Sample_C104	Ymf59|Sample_C026	0.211018	0.609803	0.346042	357	76.5367	280.463	81	29.9347	51.0653
Ymf59|P.caudatum-Sample_C104	Ymf59|Sample_M13	0.540879	0.613134	0.882154	315	58.9133	256.087	121	23.7827	97.2173
Ymf59|P.caudatum-Sample_C104	Ymf59|P.octaurelia-Sample_1038	0.943079	0.839909	1.12283	312	80.6971	231.303	158	37.6058	120.394
Ymf59|P.caudatum-Sample_C104	Ymf59|P.sexaurelia-Sample_130	0.687192	3.08599	0.222681	315	78.4797	236.52	154	50.6306	103.369
Ymf59|P.caudatum-Sample_C104	Ymf59|P.tetraurelia-Sample_291	0.872292	1.45546	0.599322	309	82.1875	226.813	160	47.4706	112.529
Ymf59|P.caudatum-Sample_C104	Ymf59|Sample_Peniche3I	0.546459	0.745418	0.733091	315	60.7597	254.24	124	26.8053	97.1947
Ymf59|Sample_C026	Ymf59|Sample_M13	0.488659	0.68298	0.715481	312	57.547	254.453	114	23.6787	90.3213
Ymf59|Sample_C026	Ymf59|P.octaurelia-Sample_1038	0.816819	2.54938	0.320399	312	79.3023	232.698	159	45.3405	113.66
Ymf59|Sample_C026	Ymf59|P.sexaurelia-Sample_130	0.81398	1.51084	0.538759	315	76.4227	238.577	165	49.6713	115.329
Ymf59|Sample_C026	Ymf59|P.tetraurelia-Sample_291	0.742299	1.74945	0.424304	306	79.8308	226.169	158	54.0629	103.937
Ymf59|Sample_C026	Ymf59|Sample_Peniche3I	0.506814	1.00619	0.503694	312	59.1237	252.876	122	29.8739	92.1261
Ymf59|Sample_M13	Ymf59|P.octaurelia-Sample_1038	0.755608	1.22943	0.614599	300	78.8635	221.137	151	47.6655	103.335
Ymf59|Sample_M13	Ymf59|P.sexaurelia-Sample_130	0.795449	1.65327	0.481138	306	82.0156	223.984	153	46.4953	106.505
Ymf59|Sample_M13	Ymf59|P.tetraurelia-Sample_291	0.904592	1.20818	0.748726	294	82.7846	211.215	150	42.3836	107.616
Ymf59|Sample_M13	Ymf59|Sample_Peniche3I	0.0338635	1.27185	0.0266254	342	39.2597	302.74	28	18	10
Ymf59|P.octaurelia-Sample_1038	Ymf59|P.sexaurelia-Sample_130	0.345038	0.755338	0.4568	327	89.8227	237.177	106	40.8828	65.1172
Ymf59|P.octaurelia-Sample_1038	Ymf59|P.tetraurelia-Sample_291	0.194709	0.357377	0.544828	315	97.9641	217.036	63	26.5785	36.4215
Ymf59|P.octaurelia-Sample_1038	Ymf59|Sample_Peniche3I	0.663946	2.91823	0.227516	300	79.0057	220.994	142	46.4163	95.5837
Ymf59|P.sexaurelia-Sample_130	Ymf59|P.tetraurelia-Sample_291	0.326787	0.511549	0.638818	318	88.7783	229.222	92	31.8535	60.1465
Ymf59|P.sexaurelia-Sample_130	Ymf59|Sample_Peniche3I	0.736787	1.27652	0.577184	306	81.4111	224.589	147	44.8569	102.143
Ymf59|P.tetraurelia-Sample_291	Ymf59|Sample_Peniche3I	0.801777	1.11083	0.721781	294	81.3536	212.646	143	41.4297	101.57
#Average Ks: 1.18590433333
#Average Ka: 0.572069152778
#Average KaKs: 0.545775705556