python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf56.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf56.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.sexuarelia.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.sexuarelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf57.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf57.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf59.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf59.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf61.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf61.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf61.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf61.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf61.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf61.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf61.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf61.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf61.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf61.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf63.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf63.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf64.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf64.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf64.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf64.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf64.muscle.multimicronucleatum.fna muscle 4 NG Paramecium-fna.Ymf64.muscle.multimicronucleatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf64.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf64.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf65.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf65.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf65.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf65.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf65.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf65.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf65.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf65.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf65.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf65.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf65.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf65.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf66.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf66.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf67.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf67.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf68.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf68.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf76.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf76.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf76.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf76.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf76.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf76.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf76.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf76.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.mulitm.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.mulitm.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf78.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf78.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf79.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf79.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.multim.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf80.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf80.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.multi.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.multi.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf83.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf83.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.all.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.aurelia.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.caudatum.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.multi.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.multi.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.Ymf84.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.Ymf84.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.all.fna muscle 4 NG Paramecium-fna.atp9.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.aurelia.fna muscle 4 NG Paramecium-fna.atp9.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.atp9.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.caudatum.fna muscle 4 NG Paramecium-fna.atp9.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.multim.fna muscle 4 NG Paramecium-fna.atp9.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.atp9.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.atp9.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.atp9.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.all.fna muscle 4 NG Paramecium-fna.cob.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.aurelia.fna muscle 4 NG Paramecium-fna.cob.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.cob.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.caudatum.fna muscle 4 NG Paramecium-fna.cob.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.multim.fna muscle 4 NG Paramecium-fna.cob.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.cob.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cob.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.cob.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.all.fna muscle 4 NG Paramecium-fna.cox1.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.aurelia.fna muscle 4 NG Paramecium-fna.cox1.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.cox1.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.caudatum.fna muscle 4 NG Paramecium-fna.cox1.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.multim.fna muscle 4 NG Paramecium-fna.cox1.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.cox1.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox1.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.cox1.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.all.fna muscle 4 NG Paramecium-fna.cox2.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.aurelia.fna muscle 4 NG Paramecium-fna.cox2.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.cox2.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.caudatum.fna muscle 4 NG Paramecium-fna.cox2.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.multim.fna muscle 4 NG Paramecium-fna.cox2.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.cox2.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.cox2.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.cox2.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.all.fna muscle 4 NG Paramecium-fna.nadh10.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh10.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh10.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh10.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh10.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh10.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh10.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh10.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.all.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_a.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh1_a.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.all.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh1_b.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh1_b.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.all.fna muscle 4 NG Paramecium-fna.nadh2.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh2.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh2.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh2.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh2.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh2.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh2.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh2.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh3.muscle.all.fna muscle 4 NG Paramecium-fna.nadh3.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh3.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh3.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh3.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh3.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh3.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh3.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh3.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh3.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh3.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh3.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4.muscle.all.fna muscle 4 NG Paramecium-fna.nadh4.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh4.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh4.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh4.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh4.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh4.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4L.muscle.all.fna muscle 4 NG Paramecium-fna.nadh4L.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4L.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh4L.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4L.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh4L.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4L.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh4L.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4L.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh4L.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh4L.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh4L.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.all.fna muscle 4 NG Paramecium-fna.nadh5.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh5.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh5.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh5.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh5.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh5.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh5.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh5.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.all.fna muscle 4 NG Paramecium-fna.nadh6.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh6.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh6.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh6.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh6.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh6.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh6.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh6.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.all.fna muscle 4 NG Paramecium-fna.nadh7.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh7.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh7.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh7.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.multim.fna muscle 4 NG Paramecium-fna.nadh7.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh7.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh7.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh7.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh9.muscle.all.fna muscle 4 NG Paramecium-fna.nadh9.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh9.muscle.aurelia.fna muscle 4 NG Paramecium-fna.nadh9.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh9.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.nadh9.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh9.muscle.caudatum.fna muscle 4 NG Paramecium-fna.nadh9.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh9.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.nadh9.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.nadh9.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.nadh9.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf105.muscle.aurelia.fna muscle 4 NG Paramecium-fna.orf105.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf105.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.orf105.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf156.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.orf156.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.all.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.aurelia.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.caudatum.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.multim.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.orf178_rpL6.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.orf178_rpL6.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.all.fna muscle 4 NG Paramecium-fna.rpL12.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpL12.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpL12.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpL12.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.multim.fna muscle 4 NG Paramecium-fna.rpL12.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpL12.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL12.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpL12.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.all.fna muscle 4 NG Paramecium-fna.rpL14.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpL14.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpL14.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpL14.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.multim.fna muscle 4 NG Paramecium-fna.rpL14.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpL14.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL14.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpL14.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.all.fna muscle 4 NG Paramecium-fna.rpL16.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpL16.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpL16.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpL16.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.multim.fna muscle 4 NG Paramecium-fna.rpL16.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpL16.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpL16.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpL16.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.all.fna muscle 4 NG Paramecium-fna.rpS12.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpS12.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpS12.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpS12.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.multim.fna muscle 4 NG Paramecium-fna.rpS12.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpS12.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS12.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpS12.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.all.fna muscle 4 NG Paramecium-fna.rpS13.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpS13.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpS13.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpS13.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.multim.fna muscle 4 NG Paramecium-fna.rpS13.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpS13.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS13.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpS13.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.all.fna muscle 4 NG Paramecium-fna.rpS14.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpS14.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpS14.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpS14.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.multim.fna muscle 4 NG Paramecium-fna.rpS14.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpS14.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS14.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpS14.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS19.muscle.all.fna muscle 4 NG Paramecium-fna.rpS19.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS19.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpS19.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS19.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpS19.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS19.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpS19.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS19.muscle.multim.fna muscle 4 NG Paramecium-fna.rpS19.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS19.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpS19.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.all.fna muscle 4 NG Paramecium-fna.rpS3.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.aurelia.fna muscle 4 NG Paramecium-fna.rpS3.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.rpS3.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.caudatum.fna muscle 4 NG Paramecium-fna.rpS3.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.multim.fna muscle 4 NG Paramecium-fna.rpS3.muscle.multim.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.rpS3.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.rpS3.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.rpS3.muscle.tetraurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.yejR.muscle.all.fna muscle 4 NG Paramecium-fna.yejR.muscle.all.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.yejR.muscle.aurelia.fna muscle 4 NG Paramecium-fna.yejR.muscle.aurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.yejR.muscle.biaurelia.fna muscle 4 NG Paramecium-fna.yejR.muscle.biaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.yejR.muscle.caudatum.fna muscle 4 NG Paramecium-fna.yejR.muscle.caudatum.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.yejR.muscle.sexaurelia.fna muscle 4 NG Paramecium-fna.yejR.muscle.sexaurelia.KaKs 
python /N/dc2/projects/marinovg/code-new/KaKsCalculator_aggregator.py /N/dc2/projects/marinovg/programs/KaKs_Calculator2.0/bin/Linux/KaKs_Calculator /N/dc2/projects/marinovg/2015-09-07-assemblies/mito/dN-dS-Ka-Ks/Paramecium-fna.yejR.muscle.tetraurelia.fna muscle 4 NG Paramecium-fna.yejR.muscle.tetraurelia.KaKs