#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
nadh5|Sample_C026	nadh5|P.caudatum-Sample_C104	0.0406517	0.581898	0.0698606	1923	394.05	1528.95	220	159.5	60.5
nadh5|Sample_C026	nadh5|P.octaurelia-Sample_1038	0.203588	NA	NA	1905	414.961	1490.04	644	378.333	265.667
nadh5|Sample_C026	nadh5|Sample_M13	0.189332	0.695584	0.272191	1815	371.696	1443.3	410	168.5	241.5
nadh5|Sample_C026	nadh5|P.sexaurelia-Sample_130	0.470165	0.36287	1.29568	1638	375.99	1262.01	549	108.167	440.833
nadh5|Sample_C026	nadh5|P.biaurelia-Sample_379	0.212146	NA	NA	1911	411.485	1499.52	635	357.917	277.083
nadh5|Sample_C026	nadh5|Sample_Peniche3I	0.195795	0.595914	0.328563	1821	369.278	1451.72	402	151.833	250.167
nadh5|Sample_C026	nadh5|P.tetraurelia-Sample_291	0.514996	0.30441	1.69179	1752	357.371	1394.63	609	89.4167	519.583
nadh5|Sample_C026	nadh5|P.multimicronucleatum-Sample_M04	0.193496	0.595676	0.324835	1791	368.159	1422.84	394	151.333	242.667
nadh5|P.caudatum-Sample_C104	nadh5|P.octaurelia-Sample_1038	0.442237	0.417554	1.05911	1623	377.896	1245.1	537	121	416
nadh5|P.caudatum-Sample_C104	nadh5|Sample_M13	0.22565	0.417964	0.539879	1761	317.283	1443.72	383	101.667	281.333
nadh5|P.caudatum-Sample_C104	nadh5|P.sexaurelia-Sample_130	0.456548	0.335737	1.35984	1617	378.097	1238.9	526	102.333	423.667
nadh5|P.caudatum-Sample_C104	nadh5|P.biaurelia-Sample_379	0.195498	NA	NA	1896	406.03	1489.97	603	346.583	256.417
nadh5|P.caudatum-Sample_C104	nadh5|Sample_Peniche3I	0.182848	0.71317	0.256388	1848	379.724	1468.28	413	174.75	238.25
nadh5|P.caudatum-Sample_C104	nadh5|P.tetraurelia-Sample_291	0.524672	0.294913	1.77907	1755	354.401	1400.6	615	86.4167	528.583
nadh5|P.caudatum-Sample_C104	nadh5|P.multimicronucleatum-Sample_M04	0.184079	0.555187	0.331562	1818	363.498	1454.5	380	142.583	237.417
nadh5|P.octaurelia-Sample_1038	nadh5|Sample_M13	0.484781	0.354415	1.36783	1584	369.395	1214.6	538	104.333	433.667
nadh5|P.octaurelia-Sample_1038	nadh5|P.sexaurelia-Sample_130	0.0890363	NA	NA	1914	435.023	1478.98	464	339.833	124.167
nadh5|P.octaurelia-Sample_1038	nadh5|P.biaurelia-Sample_379	0.0741605	2.3822	0.0311311	1914	436.44	1477.56	418	313.667	104.333
nadh5|P.octaurelia-Sample_1038	nadh5|Sample_Peniche3I	0.521723	0.243255	2.14475	1692	339.355	1352.65	579	70.5	508.5
nadh5|P.octaurelia-Sample_1038	nadh5|P.tetraurelia-Sample_291	0.113139	1.4398	0.0785797	1911	439.833	1471.17	436	281.5	154.5
nadh5|P.octaurelia-Sample_1038	nadh5|P.multimicronucleatum-Sample_M04	0.519589	0.291218	1.78419	1704	335.283	1368.72	594	80.9167	513.083
nadh5|Sample_M13	nadh5|P.sexaurelia-Sample_130	0.429097	0.436016	0.98413	1587	369.228	1217.77	520	122.083	397.917
nadh5|Sample_M13	nadh5|P.biaurelia-Sample_379	0.475172	0.231625	2.05147	1680	329.532	1350.47	541	65.6667	475.333
nadh5|Sample_M13	nadh5|Sample_Peniche3I	0.0223015	0.250862	0.0888995	1866	386.926	1479.07	115	82.5	32.5
nadh5|Sample_M13	nadh5|P.tetraurelia-Sample_291	0.542713	0.310256	1.74924	1680	339.777	1340.22	604	86.3333	517.667
nadh5|Sample_M13	nadh5|P.multimicronucleatum-Sample_M04	0.0765002	0.56315	0.135843	1860	379.599	1480.4	258	150.333	107.667
nadh5|P.sexaurelia-Sample_130	nadh5|P.biaurelia-Sample_379	0.0868278	NA	NA	1914	430.084	1483.92	445	323.333	121.667
nadh5|P.sexaurelia-Sample_130	nadh5|Sample_Peniche3I	0.217037	NA	NA	1821	388.303	1432.7	597	327	270
nadh5|P.sexaurelia-Sample_130	nadh5|P.tetraurelia-Sample_291	0.421693	0.209685	2.01108	1806	426.407	1379.59	523	78	445
nadh5|P.sexaurelia-Sample_130	nadh5|P.multimicronucleatum-Sample_M04	0.214141	NA	NA	1851	393.54	1457.46	619	347.5	271.5
nadh5|P.biaurelia-Sample_379	nadh5|Sample_Peniche3I	0.460801	0.355939	1.29461	1575	365.217	1209.78	520	103.5	416.5
nadh5|P.biaurelia-Sample_379	nadh5|P.tetraurelia-Sample_291	0.129852	5.676	0.0228773	1911	434.891	1476.11	502	326	176
nadh5|P.biaurelia-Sample_379	nadh5|P.multimicronucleatum-Sample_M04	0.459168	0.438763	1.04651	1596	361.503	1234.5	544	120.083	423.917
nadh5|Sample_Peniche3I	nadh5|P.tetraurelia-Sample_291	0.338492	1.46113	0.231665	1734	363.215	1370.78	607	233.583	373.417
nadh5|Sample_Peniche3I	nadh5|P.multimicronucleatum-Sample_M04	0.144168	0.16035	0.899085	1599	323.826	1275.17	214	46.75	167.25
nadh5|P.tetraurelia-Sample_291	nadh5|P.multimicronucleatum-Sample_M04	0.441057	0.708432	0.622581	1608	358.701	1249.3	581	164.417	416.583
#Average Ka: 0.319823341379
#Average Ks: 0.73737837931
#Average KaKs: 0.891491041379