#seq1	seq2	Ka	Ks	Ka/Ks	Length	S-Sites	N-Sites	Substitutions	S-Substitutions	N-Substitutions
Ymf67|P.caudatum-Sample_C104	Ymf67|Sample_M13	0.334572	0.506626	0.660392	963	173.534	789.466	277	63.9167	213.083
Ymf67|P.caudatum-Sample_C104	Ymf67|P.biaurelia-Sample_379	0.378546	1.03883	0.364397	921	181.998	739.002	322	102.333	219.667
Ymf67|P.caudatum-Sample_C104	Ymf67|Sample_C026	0.082504	0.58233	0.141679	1062	195.9	866.1	147	79.3333	67.6667
Ymf67|P.caudatum-Sample_C104	Ymf67|Sample_Peniche3I	0.342374	0.477445	0.717096	972	176.491	795.509	281	62.3333	218.667
Ymf67|P.caudatum-Sample_C104	Ymf67|P.sexaurelia-Sample_130	0.419978	1.10562	0.379858	978	192.816	785.184	364	111.5	252.5
Ymf67|P.caudatum-Sample_C104	Ymf67|P.multimicronucleatum-Sample_M04	0.372842	0.445407	0.837082	891	148.126	742.874	268	49.75	218.25
Ymf67|P.caudatum-Sample_C104	Ymf67|P.octaurelia-Sample_1038	0.32444	NA	NA	969	184.958	784.042	349	142.5	206.5
Ymf67|P.caudatum-Sample_C104	Ymf67|P.tetraurelia-Sample_291	0.441056	1.70504	0.258678	951	188.274	762.726	381	126.667	254.333
Ymf67|Sample_M13	Ymf67|P.biaurelia-Sample_379	0.470628	0.855091	0.550384	966	188.828	777.172	368	96.3333	271.667
Ymf67|Sample_M13	Ymf67|Sample_C026	0.293091	0.514818	0.569311	972	178.538	793.462	259	66.5	192.5
Ymf67|Sample_M13	Ymf67|Sample_Peniche3I	0.0270277	0.252975	0.106839	1062	195.595	866.405	65	42	23
Ymf67|Sample_M13	Ymf67|P.sexaurelia-Sample_130	0.392001	1.01025	0.388024	960	191.897	768.103	341	106.5	234.5
Ymf67|Sample_M13	Ymf67|P.multimicronucleatum-Sample_M04	0.0883047	0.420587	0.209956	1032	188.707	843.293	131	60.75	70.25
Ymf67|Sample_M13	Ymf67|P.octaurelia-Sample_1038	0.34359	2.4475	0.140384	978	191.667	786.333	355	138.25	216.75
Ymf67|Sample_M13	Ymf67|P.tetraurelia-Sample_291	0.399025	1.50226	0.265617	933	186.497	746.503	352	121	231
Ymf67|P.biaurelia-Sample_379	Ymf67|Sample_C026	0.398236	0.790199	0.503969	921	180.659	740.341	317	88.25	228.75
Ymf67|P.biaurelia-Sample_379	Ymf67|Sample_Peniche3I	0.425305	1.27768	0.332873	957	188.136	768.864	365	115.417	249.583
Ymf67|P.biaurelia-Sample_379	Ymf67|P.sexaurelia-Sample_130	0.158094	2.62077	0.0603236	1047	215.087	831.913	275	156.417	118.583
Ymf67|P.biaurelia-Sample_379	Ymf67|P.multimicronucleatum-Sample_M04	0.43009	1.675	0.25677	981	192.521	788.479	387	128.917	258.083
Ymf67|P.biaurelia-Sample_379	Ymf67|P.octaurelia-Sample_1038	0.143239	NA	NA	1029	214.784	814.216	268	161.833	106.167
Ymf67|P.biaurelia-Sample_379	Ymf67|P.tetraurelia-Sample_291	0.195972	1.57038	0.124792	1032	214.419	817.581	282	141	141
Ymf67|Sample_C026	Ymf67|Sample_Peniche3I	0.277521	0.575787	0.481986	993	180.373	812.627	261	72.5	188.5
Ymf67|Sample_C026	Ymf67|P.sexaurelia-Sample_130	0.399541	0.857395	0.465994	954	186.436	767.564	333	95.25	237.75
Ymf67|Sample_C026	Ymf67|P.multimicronucleatum-Sample_M04	0.30892	0.369666	0.835674	903	164.465	738.535	235	48	187
Ymf67|Sample_C026	Ymf67|P.octaurelia-Sample_1038	0.390574	1.01305	0.385543	963	190.297	772.703	341	105.75	235.25
Ymf67|Sample_C026	Ymf67|P.tetraurelia-Sample_291	0.462273	1.06076	0.435795	945	192.742	752.258	369	109.417	259.583
Ymf67|Sample_Peniche3I	Ymf67|P.sexaurelia-Sample_130	0.422014	0.740041	0.570258	924	181.405	742.595	325	85.3333	239.667
Ymf67|Sample_Peniche3I	Ymf67|P.multimicronucleatum-Sample_M04	0.0874138	0.297795	0.293537	987	181.057	805.943	111	44.5	66.5
Ymf67|Sample_Peniche3I	Ymf67|P.octaurelia-Sample_1038	0.319776	4.39749	0.0727179	975	191.099	783.901	347	142.917	204.083
Ymf67|Sample_Peniche3I	Ymf67|P.tetraurelia-Sample_291	0.423018	1.75726	0.240726	942	190.15	751.85	372	128.917	243.083
Ymf67|P.sexaurelia-Sample_130	Ymf67|P.multimicronucleatum-Sample_M04	0.400437	0.916367	0.436984	945	191.091	753.909	335	101.083	233.917
Ymf67|P.sexaurelia-Sample_130	Ymf67|P.octaurelia-Sample_1038	0.14959	NA	NA	1014	209.033	804.967	279	169.833	109.167
Ymf67|P.sexaurelia-Sample_130	Ymf67|P.tetraurelia-Sample_291	0.279568	0.620602	0.450479	990	222.283	767.717	273	93.8333	179.167
Ymf67|P.multimicronucleatum-Sample_M04	Ymf67|P.octaurelia-Sample_1038	0.341067	NA	NA	984	190.04	793.96	368	150.417	217.583
Ymf67|P.multimicronucleatum-Sample_M04	Ymf67|P.tetraurelia-Sample_291	0.503636	1.06258	0.473976	942	186.138	755.862	383	105.75	277.25
Ymf67|P.octaurelia-Sample_1038	Ymf67|P.tetraurelia-Sample_291	0.128102	1.93236	0.0662932	1032	214.656	817.344	245	148.75	96.25
#Average Ka: 0.32487594375
#Average Ks: 1.13749878125
#Average KaKs: 0.377449615625